BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780187|ref|YP_003064600.1| 30S ribosomal protein S4 [Candidatus Liberibacter asiaticus str. psy62] (206 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|239831713|ref|ZP_04680042.1| ribosomal protein S4 [Ochrobactrum intermedium LMG 3301] gi|239823980|gb|EEQ95548.1| ribosomal protein S4 [Ochrobactrum intermedium LMG 3301] Length = 263 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 150/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 59 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 118 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 119 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 178 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQL VLEA QLAERDVP+YI V+H+ +VAT+ Sbjct: 179 VNVNGRRVNIQSYRLKAGDVVEVREKSKQLVIVLEAVQLAERDVPDYIEVDHNKLVATYS 238 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPY V M+PNLVVEFYSR Sbjct: 239 RVPT-LTDVPYAVQMEPNLVVEFYSR 263 >gi|260432821|ref|ZP_05786792.1| ribosomal protein S4 [Silicibacter lacuscaerulensis ITI-1157] gi|260416649|gb|EEX09908.1| ribosomal protein S4 [Silicibacter lacuscaerulensis ITI-1157] Length = 206 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 150/206 (72%), Positives = 173/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ KSKQLA VLEA LAERDVP+Y+ V+H M ATFV Sbjct: 121 VKVNGKRVNIPSYRVKEGDVIEVRDKSKQLAVVLEAVALAERDVPDYLDVDHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R PS L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPS-LGDVPYPVMMEPNLVVEFYAK 205 >gi|158423848|ref|YP_001525140.1| 30S ribosomal protein S4 [Azorhizobium caulinodans ORS 571] gi|189045363|sp|A8I889|RS4_AZOC5 RecName: Full=30S ribosomal protein S4 gi|158330737|dbj|BAF88222.1| ribosomal protein S4 [Azorhizobium caulinodans ORS 571] Length = 205 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 145/206 (70%), Positives = 167/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+KHKIDRR+GEN+WGR KSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRISAKHKIDRRMGENIWGRSKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG I EK+F +++ EA R +GDT NLI LE RLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 YYGSIGEKQFHAVYVEASRLKGDTGANLIGLLERRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SY+ K GDVIEV++ SKQ+A VLEA QLAERDVP+Y+ V+H+ + A F Sbjct: 121 VKVNGRRVNIPSYQVKVGDVIEVREASKQMALVLEAVQLAERDVPDYLEVDHNRLTAKFN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L +VPYPV M+PNLVVEFYSR Sbjct: 181 RIPE-LNEVPYPVQMEPNLVVEFYSR 205 >gi|126725806|ref|ZP_01741648.1| 30S ribosomal protein S4 [Rhodobacterales bacterium HTCC2150] gi|126705010|gb|EBA04101.1| 30S ribosomal protein S4 [Rhodobacterales bacterium HTCC2150] Length = 206 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 173/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFSEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR K+GDVIEV+ +SKQ A+V+EASQLAERDVP+Y+ V+H MVATF Sbjct: 121 VKVNGKKVNIPSYRVKDGDVIEVRDRSKQNATVIEASQLAERDVPDYVDVDHSKMVATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R PS DVPYPVIM+PNLVVEFY++ Sbjct: 181 RTPS-FSDVPYPVIMEPNLVVEFYAK 205 >gi|254780187|ref|YP_003064600.1| 30S ribosomal protein S4 [Candidatus Liberibacter asiaticus str. psy62] gi|254039864|gb|ACT56660.1| 30S ribosomal protein S4 [Candidatus Liberibacter asiaticus str. psy62] Length = 206 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 206/206 (100%), Positives = 206/206 (100%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK Sbjct: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH Sbjct: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV Sbjct: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIPSSLKDVPYPVIMQPNLVVEFYSR Sbjct: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 >gi|99081947|ref|YP_614101.1| 30S ribosomal protein S4 [Ruegeria sp. TM1040] gi|122984198|sp|Q1GES7|RS4_SILST RecName: Full=30S ribosomal protein S4 gi|99038227|gb|ABF64839.1| SSU ribosomal protein S4P [Ruegeria sp. TM1040] Length = 206 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KSKQ +VLEA QLAERDVP+YI V+H + ATFV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQNVAVLEAVQLAERDVPDYIEVDHSKLTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RAPG-LADVPYPVVMEPNLVVEFYAK 205 >gi|254466555|ref|ZP_05079966.1| ribosomal protein S4 [Rhodobacterales bacterium Y4I] gi|206687463|gb|EDZ47945.1| ribosomal protein S4 [Rhodobacterales bacterium Y4I] Length = 206 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 149/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV+ KSKQ+ +VLEA QLAERDVP+YI +H M ATFV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVRDKSKQMVAVLEAVQLAERDVPDYIEADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ L DVPYPVIM+PNLVVEFY++ Sbjct: 181 RTPA-LGDVPYPVIMEPNLVVEFYAK 205 >gi|294678498|ref|YP_003579113.1| 30S ribosomal protein S4 [Rhodobacter capsulatus SB 1003] gi|294477318|gb|ADE86706.1| 30S ribosomal protein S4 [Rhodobacter capsulatus SB 1003] Length = 206 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 144/206 (69%), Positives = 168/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++K+KIDRR+GEN+WGR KSP+N R YGPG HGQRRK+K S FG QLRAKQK+K Sbjct: 1 MTKRTAAKYKIDRRMGENIWGRAKSPLNKRDYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD IVYRAKFVPTIFAARQFVNH H Sbjct: 61 YYGDLTEKQFRKIYGEAERVKGDTGENLIGLLERRLDAIVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNI SYR KEGDVI V+ +SKQLA VLEA+Q ERDVP+Y+ V+H M ATFV Sbjct: 121 VTVNGARVNIASYRVKEGDVIAVRDRSKQLAIVLEAAQSGERDVPDYLEVDHGKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVEFY++ Sbjct: 181 RTPG-LSDVPYPVHMEPNLVVEFYAK 205 >gi|259416699|ref|ZP_05740619.1| ribosomal protein S4 [Silicibacter sp. TrichCH4B] gi|259348138|gb|EEW59915.1| ribosomal protein S4 [Silicibacter sp. TrichCH4B] Length = 206 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KSKQ +VLEA QLAERDVP+YI V+H + ATFV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQNVAVLEAVQLAERDVPDYIEVDHSKLTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RAPG-LADVPYPVMMEPNLVVEFYAK 205 >gi|56698013|ref|YP_168384.1| 30S ribosomal protein S4 [Ruegeria pomeroyi DSS-3] gi|62287189|sp|Q5LNM2|RS4_SILPO RecName: Full=30S ribosomal protein S4 gi|56679750|gb|AAV96416.1| ribosomal protein S4 [Ruegeria pomeroyi DSS-3] Length = 206 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV+++SKQLASVLEA LAERDVP+Y+ V+H M ATFV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVRERSKQLASVLEAVSLAERDVPDYLEVDHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPY V+M+PNLVVE+Y++ Sbjct: 181 RTPH-LGDVPYAVVMEPNLVVEYYAK 205 >gi|77462835|ref|YP_352339.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides 2.4.1] gi|126461727|ref|YP_001042841.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides ATCC 17029] gi|221638705|ref|YP_002524967.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides KD131] gi|90101713|sp|Q3J446|RS4_RHOS4 RecName: Full=30S ribosomal protein S4 gi|152112256|sp|A3PIA3|RS4_RHOS1 RecName: Full=30S ribosomal protein S4 gi|254764608|sp|B9KPH3|RS4_RHOSK RecName: Full=30S ribosomal protein S4 gi|77387253|gb|ABA78438.1| SSU ribosomal protein S4P [Rhodobacter sphaeroides 2.4.1] gi|126103391|gb|ABN76069.1| SSU ribosomal protein S4P [Rhodobacter sphaeroides ATCC 17029] gi|221159486|gb|ACM00466.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides KD131] Length = 206 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 150/206 (72%), Positives = 175/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FG QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT L+ LE RLD IVYRAKFVPTIFAARQFVNH H Sbjct: 61 YYGDLTEKQFRKIFAEAERVKGDTGEMLVGLLERRLDAIVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNIGSYRCKEGDVI+V++KS+QLA VLEA+QLAERDVP+YI V++ M ATFV Sbjct: 121 VTVNGQRVNIGSYRCKEGDVIQVREKSRQLALVLEATQLAERDVPDYIEVDYSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVEFY++ Sbjct: 181 RTPG-LGDVPYPVQMEPNLVVEFYAK 205 >gi|254718936|ref|ZP_05180747.1| 30S ribosomal protein S4 [Brucella sp. 83/13] gi|265983924|ref|ZP_06096659.1| SSU ribosomal protein S4P [Brucella sp. 83/13] gi|306838833|ref|ZP_07471664.1| ribosomal protein S4 [Brucella sp. NF 2653] gi|264662516|gb|EEZ32777.1| SSU ribosomal protein S4P [Brucella sp. 83/13] gi|306406117|gb|EFM62365.1| ribosomal protein S4 [Brucella sp. NF 2653] Length = 205 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIEVDHNKMVATYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V M+PNLVVEFYSR Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205 >gi|62289777|ref|YP_221570.1| 30S ribosomal protein S4 [Brucella abortus bv. 1 str. 9-941] gi|82699705|ref|YP_414279.1| 30S ribosomal protein S4 [Brucella melitensis biovar Abortus 2308] gi|189024020|ref|YP_001934788.1| Ribosomal protein S4 [Brucella abortus S19] gi|237815263|ref|ZP_04594261.1| ribosomal protein S4 [Brucella abortus str. 2308 A] gi|254689084|ref|ZP_05152338.1| 30S ribosomal protein S4 [Brucella abortus bv. 6 str. 870] gi|254697217|ref|ZP_05159045.1| 30S ribosomal protein S4 [Brucella abortus bv. 2 str. 86/8/59] gi|254730116|ref|ZP_05188694.1| 30S ribosomal protein S4 [Brucella abortus bv. 4 str. 292] gi|256257333|ref|ZP_05462869.1| 30S ribosomal protein S4 [Brucella abortus bv. 9 str. C68] gi|260545474|ref|ZP_05821215.1| ribosomal protein S4 [Brucella abortus NCTC 8038] gi|260754581|ref|ZP_05866929.1| SSU ribosomal protein S4P [Brucella abortus bv. 6 str. 870] gi|260757804|ref|ZP_05870152.1| SSU ribosomal protein S4P [Brucella abortus bv. 4 str. 292] gi|260761627|ref|ZP_05873970.1| SSU ribosomal protein S4P [Brucella abortus bv. 2 str. 86/8/59] gi|260883608|ref|ZP_05895222.1| 30S ribosomal protein S4 [Brucella abortus bv. 9 str. C68] gi|297248181|ref|ZP_06931899.1| 30S ribosomal protein S4 [Brucella abortus bv. 5 str. B3196] gi|75505300|sp|Q57DS5|RS4_BRUAB RecName: Full=30S ribosomal protein S4 gi|90101677|sp|Q2YNH2|RS4_BRUA2 RecName: Full=30S ribosomal protein S4 gi|226697812|sp|B2S567|RS4_BRUA1 RecName: Full=30S ribosomal protein S4 gi|62195909|gb|AAX74209.1| RpsD, ribosomal protein S4 [Brucella abortus bv. 1 str. 9-941] gi|82615806|emb|CAJ10807.1| Ribosomal protein S4:RNA-binding S4:Ribosomal protein S4, bacterial and organelle form [Brucella melitensis biovar Abortus 2308] gi|189019592|gb|ACD72314.1| Ribosomal protein S4 [Brucella abortus S19] gi|237790100|gb|EEP64310.1| ribosomal protein S4 [Brucella abortus str. 2308 A] gi|260096881|gb|EEW80756.1| ribosomal protein S4 [Brucella abortus NCTC 8038] gi|260668122|gb|EEX55062.1| SSU ribosomal protein S4P [Brucella abortus bv. 4 str. 292] gi|260672059|gb|EEX58880.1| SSU ribosomal protein S4P [Brucella abortus bv. 2 str. 86/8/59] gi|260674689|gb|EEX61510.1| SSU ribosomal protein S4P [Brucella abortus bv. 6 str. 870] gi|260873136|gb|EEX80205.1| 30S ribosomal protein S4 [Brucella abortus bv. 9 str. C68] gi|297175350|gb|EFH34697.1| 30S ribosomal protein S4 [Brucella abortus bv. 5 str. B3196] Length = 205 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 153/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKHKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V M+PNLVVEFYSR Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205 >gi|319784054|ref|YP_004143530.1| ribosomal protein S4 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169942|gb|ADV13480.1| ribosomal protein S4 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 205 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 153/206 (74%), Positives = 176/206 (85%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGD+SEK+FR +++EADR +GDTS NLI LESRLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 HYGDVSEKQFRKVYEEADRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNIGSYRCK GDV+E+++KSKQL VLEA LAERDVP+YI +H+ MVATF Sbjct: 121 VNVNGKRVNIGSYRCKPGDVVEIREKSKQLVIVLEAVGLAERDVPDYIEADHNKMVATFS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+ V M+PNLVVEFYSR Sbjct: 181 RIPG-LADVPFAVQMEPNLVVEFYSR 205 >gi|255261708|ref|ZP_05341050.1| ribosomal protein S4 [Thalassiobium sp. R2A62] gi|255104043|gb|EET46717.1| ribosomal protein S4 [Thalassiobium sp. R2A62] Length = 206 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 171/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRTSAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQLA VLEA QLAERDVP+Y+ +H M ATFV Sbjct: 121 VKVNGKKVNIPSYRVKEGDVIEVRDRSKQLAVVLEAVQLAERDVPDYVDADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPG-LGDVPYPVMMEPNLVVEFYAK 205 >gi|89070850|ref|ZP_01158095.1| 30S ribosomal protein S4 [Oceanicola granulosus HTCC2516] gi|89043588|gb|EAR49797.1| 30S ribosomal protein S4 [Oceanicola granulosus HTCC2516] Length = 206 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 144/204 (70%), Positives = 172/204 (84%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT NLI LE RLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFSEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDV+ V++KS+Q+AS+LEA+QL ERDVP+Y+ V+H + AT+V Sbjct: 121 VTVNGKRVNIPSYRVKEGDVVAVREKSRQMASILEATQLPERDVPDYLDVDHSKLTATYV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPVIM+PNLV+E+Y Sbjct: 181 RAPG-LADVPYPVIMEPNLVIEYY 203 >gi|17987416|ref|NP_540050.1| 30S ribosomal protein S4 [Brucella melitensis bv. 1 str. 16M] gi|148560413|ref|YP_001258806.1| 30S ribosomal protein S4 [Brucella ovis ATCC 25840] gi|161618794|ref|YP_001592681.1| 30S ribosomal protein S4 [Brucella canis ATCC 23365] gi|163843102|ref|YP_001627506.1| 30S ribosomal protein S4 [Brucella suis ATCC 23445] gi|225627323|ref|ZP_03785360.1| ribosomal protein S4 [Brucella ceti str. Cudo] gi|225852343|ref|YP_002732576.1| 30S ribosomal protein S4 [Brucella melitensis ATCC 23457] gi|254693567|ref|ZP_05155395.1| 30S ribosomal protein S4 [Brucella abortus bv. 3 str. Tulya] gi|254701596|ref|ZP_05163424.1| 30S ribosomal protein S4 [Brucella suis bv. 5 str. 513] gi|254704143|ref|ZP_05165971.1| 30S ribosomal protein S4 [Brucella suis bv. 3 str. 686] gi|254708561|ref|ZP_05170389.1| 30S ribosomal protein S4 [Brucella pinnipedialis M163/99/10] gi|254709936|ref|ZP_05171747.1| 30S ribosomal protein S4 [Brucella pinnipedialis B2/94] gi|254713936|ref|ZP_05175747.1| 30S ribosomal protein S4 [Brucella ceti M644/93/1] gi|254717006|ref|ZP_05178817.1| 30S ribosomal protein S4 [Brucella ceti M13/05/1] gi|256031429|ref|ZP_05445043.1| 30S ribosomal protein S4 [Brucella pinnipedialis M292/94/1] gi|256159551|ref|ZP_05457318.1| 30S ribosomal protein S4 [Brucella ceti M490/95/1] gi|256254837|ref|ZP_05460373.1| 30S ribosomal protein S4 [Brucella ceti B1/94] gi|256264157|ref|ZP_05466689.1| 30S ribosomal protein S4 [Brucella melitensis bv. 2 str. 63/9] gi|260168563|ref|ZP_05755374.1| 30S ribosomal protein S4 [Brucella sp. F5/99] gi|260563860|ref|ZP_05834346.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. 16M] gi|260566609|ref|ZP_05837079.1| SSU ribosomal protein S4P [Brucella suis bv. 4 str. 40] gi|261213831|ref|ZP_05928112.1| SSU ribosomal protein S4P [Brucella abortus bv. 3 str. Tulya] gi|261218812|ref|ZP_05933093.1| SSU ribosomal protein S4P [Brucella ceti M13/05/1] gi|261222017|ref|ZP_05936298.1| SSU ribosomal protein S4P [Brucella ceti B1/94] gi|261316061|ref|ZP_05955258.1| SSU ribosomal protein S4P [Brucella pinnipedialis M163/99/10] gi|261317482|ref|ZP_05956679.1| SSU ribosomal protein S4P [Brucella pinnipedialis B2/94] gi|261321689|ref|ZP_05960886.1| SSU ribosomal protein S4P [Brucella ceti M644/93/1] gi|261752148|ref|ZP_05995857.1| SSU ribosomal protein S4P [Brucella suis bv. 5 str. 513] gi|261754809|ref|ZP_05998518.1| SSU ribosomal protein S4P [Brucella suis bv. 3 str. 686] gi|261758035|ref|ZP_06001744.1| SSU ribosomal protein S4P [Brucella sp. F5/99] gi|265988517|ref|ZP_06101074.1| SSU ribosomal protein S4P [Brucella pinnipedialis M292/94/1] gi|265997981|ref|ZP_06110538.1| SSU ribosomal protein S4P [Brucella ceti M490/95/1] gi|306841935|ref|ZP_07474613.1| ribosomal protein S4 [Brucella sp. BO2] gi|306843765|ref|ZP_07476364.1| ribosomal protein S4 [Brucella sp. BO1] gi|26399431|sp|Q8YGM5|RS4_BRUME RecName: Full=30S ribosomal protein S4 gi|172048262|sp|A5VQ09|RS4_BRUO2 RecName: Full=30S ribosomal protein S4 gi|189045365|sp|A9MAK7|RS4_BRUC2 RecName: Full=30S ribosomal protein S4 gi|189045366|sp|B0CLF6|RS4_BRUSI RecName: Full=30S ribosomal protein S4 gi|254764573|sp|C0RIG4|RS4_BRUMB RecName: Full=30S ribosomal protein S4 gi|17983107|gb|AAL52314.1| ssu ribosomal protein s4p [Brucella melitensis bv. 1 str. 16M] gi|148371670|gb|ABQ61649.1| ribosomal protein S4 [Brucella ovis ATCC 25840] gi|161335605|gb|ABX61910.1| ribosomal protein S4 [Brucella canis ATCC 23365] gi|163673825|gb|ABY37936.1| ribosomal protein S4 [Brucella suis ATCC 23445] gi|225617328|gb|EEH14373.1| ribosomal protein S4 [Brucella ceti str. Cudo] gi|225640708|gb|ACO00622.1| ribosomal protein S4 [Brucella melitensis ATCC 23457] gi|260153876|gb|EEW88968.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. 16M] gi|260156127|gb|EEW91207.1| SSU ribosomal protein S4P [Brucella suis bv. 4 str. 40] gi|260915438|gb|EEX82299.1| SSU ribosomal protein S4P [Brucella abortus bv. 3 str. Tulya] gi|260920601|gb|EEX87254.1| SSU ribosomal protein S4P [Brucella ceti B1/94] gi|260923901|gb|EEX90469.1| SSU ribosomal protein S4P [Brucella ceti M13/05/1] gi|261294379|gb|EEX97875.1| SSU ribosomal protein S4P [Brucella ceti M644/93/1] gi|261296705|gb|EEY00202.1| SSU ribosomal protein S4P [Brucella pinnipedialis B2/94] gi|261305087|gb|EEY08584.1| SSU ribosomal protein S4P [Brucella pinnipedialis M163/99/10] gi|261738019|gb|EEY26015.1| SSU ribosomal protein S4P [Brucella sp. F5/99] gi|261741901|gb|EEY29827.1| SSU ribosomal protein S4P [Brucella suis bv. 5 str. 513] gi|261744562|gb|EEY32488.1| SSU ribosomal protein S4P [Brucella suis bv. 3 str. 686] gi|262552449|gb|EEZ08439.1| SSU ribosomal protein S4P [Brucella ceti M490/95/1] gi|263094376|gb|EEZ18221.1| 30S ribosomal protein S4 [Brucella melitensis bv. 2 str. 63/9] gi|264660714|gb|EEZ30975.1| SSU ribosomal protein S4P [Brucella pinnipedialis M292/94/1] gi|306275956|gb|EFM57669.1| ribosomal protein S4 [Brucella sp. BO1] gi|306287968|gb|EFM59376.1| ribosomal protein S4 [Brucella sp. BO2] gi|326408851|gb|ADZ65916.1| 30S ribosomal protein S4 [Brucella melitensis M28] gi|326538567|gb|ADZ86782.1| ribosomal protein S4 [Brucella melitensis M5-90] Length = 205 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V M+PNLVVEFYSR Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205 >gi|89053445|ref|YP_508896.1| 30S ribosomal protein S4 [Jannaschia sp. CCS1] gi|122499375|sp|Q28TU1|RS4_JANSC RecName: Full=30S ribosomal protein S4 gi|88862994|gb|ABD53871.1| SSU ribosomal protein S4P [Jannaschia sp. CCS1] Length = 206 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 147/206 (71%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R RGDT LI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAERLRGDTGEFLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVI V+ KSKQLA VLEA LAERDVP+Y+ +H M ATFV Sbjct: 121 VTVNGQKVNIPSYRVKEGDVIAVRDKSKQLAVVLEAVGLAERDVPDYVDADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPG-LSDVPYPVVMEPNLVVEFYAK 205 >gi|298292130|ref|YP_003694069.1| ribosomal protein S4 [Starkeya novella DSM 506] gi|296928641|gb|ADH89450.1| ribosomal protein S4 [Starkeya novella DSM 506] Length = 205 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+KHK+DRR+GEN+WGRPKSP+N R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRVSAKHKLDRRMGENIWGRPKSPINKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY I EK+F +++ EA R +GDT NLI LE RLD ++YRAKFVPT+FAARQFV+H H Sbjct: 61 YYASIGEKQFYAVYVEASRLKGDTGANLIGLLERRLDAVIYRAKFVPTVFAARQFVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY+ K GDVIEVK+ SKQL VLEA ERDVP+Y+ V+H M A F Sbjct: 121 IKVNGRRVNIPSYQVKVGDVIEVKEASKQLVLVLEAVASGERDVPDYLEVDHSKMTAKFA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L +VPYPV+M+PNLVVE+YSR Sbjct: 181 RIPE-LNEVPYPVVMEPNLVVEYYSR 205 >gi|254475661|ref|ZP_05089047.1| ribosomal protein S4 [Ruegeria sp. R11] gi|214029904|gb|EEB70739.1| ribosomal protein S4 [Ruegeria sp. R11] Length = 206 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 147/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KSKQ+ ++LEA QLAERDVP+YI +H M ATFV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQMTALLEAVQLAERDVPDYIEADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RAPG-LADVPYPVVMEPNLVVEFYAK 205 >gi|260460839|ref|ZP_05809089.1| ribosomal protein S4 [Mesorhizobium opportunistum WSM2075] gi|259033416|gb|EEW34677.1| ribosomal protein S4 [Mesorhizobium opportunistum WSM2075] Length = 205 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 153/206 (74%), Positives = 176/206 (85%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGD+SEK+FR +++EADR +GDTS NLI LESRLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 HYGDVSEKQFRKVYEEADRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNIGSYRCK GDV+EV++KSKQL VLE+ LAERDVP+YI +H+ MVATF Sbjct: 121 VNVNGKRVNIGSYRCKPGDVVEVREKSKQLVIVLESVGLAERDVPDYIEADHNKMVATFS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+ V M+PNLVVEFYSR Sbjct: 181 RIPG-LADVPFAVQMEPNLVVEFYSR 205 >gi|13470363|ref|NP_101930.1| 30S ribosomal protein S4 [Mesorhizobium loti MAFF303099] gi|26399462|sp|Q98NP5|RS4_RHILO RecName: Full=30S ribosomal protein S4 gi|14021103|dbj|BAB47716.1| 30S ribosomal protein S4 [Mesorhizobium loti MAFF303099] Length = 205 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 154/206 (74%), Positives = 176/206 (85%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGD+SEK+FR +++EADR +GDTS NLI LESRLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 HYGDVSEKQFRKVYEEADRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNIGSYRCK GDVIEV++KSKQL VLE+ LAERDVP+YI +H+ MVATF Sbjct: 121 VNVNGKRVNIGSYRCKPGDVIEVREKSKQLVIVLESVGLAERDVPDYIEADHNKMVATFS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+ V M+PNLVVEFYSR Sbjct: 181 RIPG-LADVPFAVQMEPNLVVEFYSR 205 >gi|222148432|ref|YP_002549389.1| 30S ribosomal protein S4 [Agrobacterium vitis S4] gi|254764562|sp|B9JVV3|RS4_AGRVS RecName: Full=30S ribosomal protein S4 gi|221735420|gb|ACM36383.1| 30S ribosomal protein S4 [Agrobacterium vitis S4] Length = 205 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 158/206 (76%), Positives = 178/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRASSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+ + EA+R +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRATYDEANRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV+QKSKQLA VLEA+QLAERDVP+YI V+H+ MVATFV Sbjct: 121 VSVNGVKVNIGSYRCKAGDVIEVRQKSKQLAIVLEATQLAERDVPDYIEVDHNKMVATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPY VIM+P LVVEFYSR Sbjct: 181 RVPT-LSDVPYAVIMEPQLVVEFYSR 205 >gi|163745685|ref|ZP_02153045.1| 30S ribosomal protein S4 [Oceanibulbus indolifex HEL-45] gi|161382503|gb|EDQ06912.1| 30S ribosomal protein S4 [Oceanibulbus indolifex HEL-45] Length = 206 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 144/206 (69%), Positives = 171/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++KHK+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTAAKHKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQLASVLEA QL ERDVP+Y+ +H + ATFV Sbjct: 121 VRVNGKKVNIPSYRVKEGDVIEVRDRSKQLASVLEAVQLPERDVPDYLETDHSKLTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPG-LSDVPYPVVMEPNLVVEFYAK 205 >gi|84686195|ref|ZP_01014090.1| 30S ribosomal protein S4 [Maritimibacter alkaliphilus HTCC2654] gi|84665722|gb|EAQ12197.1| 30S ribosomal protein S4 [Rhodobacterales bacterium HTCC2654] Length = 206 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 151/204 (74%), Positives = 173/204 (84%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT NLI LE RLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 YYGDMTEKQFRRIFAEAERLKGDTGENLIGLLERRLDAVVYRAKFVPTIFAARQFVNHAH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V+VNG+ VNI SYR KEGDVIEV++KSKQLA VLEASQL ERDVP+Y+ V+H M ATFV Sbjct: 121 VMVNGQRVNIPSYRVKEGDVIEVREKSKQLAIVLEASQLPERDVPDYLEVDHSKMKATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+EFY Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEFY 203 >gi|254486907|ref|ZP_05100112.1| ribosomal protein S4 [Roseobacter sp. GAI101] gi|214043776|gb|EEB84414.1| ribosomal protein S4 [Roseobacter sp. GAI101] Length = 206 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 144/206 (69%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTAAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQ+A++LEA+QL ERDVP+Y+ V+H M ATFV Sbjct: 121 VKVNGKKVNIPSYRVKEGDVIEVRDRSKQMAALLEATQLPERDVPDYMEVDHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPA-LGDVPYPVVMEPNLVVEFYAK 205 >gi|126739832|ref|ZP_01755523.1| 30S ribosomal protein S4 [Roseobacter sp. SK209-2-6] gi|126719064|gb|EBA15775.1| 30S ribosomal protein S4 [Roseobacter sp. SK209-2-6] Length = 206 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 146/206 (70%), Positives = 170/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA R GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDMTEKQFRRIYAEAVRVNGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVI V+ KSKQLA ++EA+QLAERDVP+YI +H M ATFV Sbjct: 121 VTVNGKRVNIPSYRVKEGDVIAVRDKSKQLAVLIEATQLAERDVPDYIEADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPG-LGDVPYPVVMEPNLVVEFYAK 205 >gi|260429241|ref|ZP_05783218.1| ribosomal protein S4 [Citreicella sp. SE45] gi|260419864|gb|EEX13117.1| ribosomal protein S4 [Citreicella sp. SE45] Length = 206 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT LI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFGEAERIKGDTGELLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KSKQ+A VLEA+QL ERDVP+Y+ V+H M ATFV Sbjct: 121 VLVNGQRVNIPSYRVKEGDVIEVREKSKQMALVLEAAQLPERDVPDYLEVDHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R+P L DVPYPV M+PNLV+EFY Sbjct: 181 RMPG-LADVPYPVQMEPNLVIEFY 203 >gi|86136443|ref|ZP_01055022.1| ribosomal protein S4 [Roseobacter sp. MED193] gi|85827317|gb|EAQ47513.1| ribosomal protein S4 [Roseobacter sp. MED193] Length = 206 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 145/206 (70%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTAAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI+EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDITEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVI V+ KSKQLA +LEA L ERDVP+YI +H M ATFV Sbjct: 121 VTVNGKRVNIASYRVKEGDVIAVRDKSKQLAVLLEAVALPERDVPDYIEADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RAPG-LADVPYPVVMEPNLVVEFYAK 205 >gi|23501717|ref|NP_697844.1| 30S ribosomal protein S4 [Brucella suis 1330] gi|26399355|sp|P59128|RS4_BRUSU RecName: Full=30S ribosomal protein S4 gi|23347642|gb|AAN29759.1| ribosomal protein S4 [Brucella suis 1330] Length = 205 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V M+PNLVVEFYSR Sbjct: 181 RVPGLL-DVPYAVQMEPNLVVEFYSR 205 >gi|254451859|ref|ZP_05065296.1| ribosomal protein S4 [Octadecabacter antarcticus 238] gi|198266265|gb|EDY90535.1| ribosomal protein S4 [Octadecabacter antarcticus 238] Length = 206 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 142/204 (69%), Positives = 168/204 (82%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGMQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRKIFTEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGD+IEV+ SKQ +VL+A LAERDVP+Y+ V+H M ATFV Sbjct: 121 VTVNGKKVNIPSYRVKEGDIIEVRDSSKQNVAVLDAIGLAERDVPDYMDVDHSKMSATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+E+Y Sbjct: 181 RTPG-LGDVPYPVMMEPNLVIEYY 203 >gi|146278250|ref|YP_001168409.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides ATCC 17025] gi|172046018|sp|A4WUP0|RS4_RHOS5 RecName: Full=30S ribosomal protein S4 gi|145556491|gb|ABP71104.1| SSU ribosomal protein S4P [Rhodobacter sphaeroides ATCC 17025] Length = 206 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 177/206 (85%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FG QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT L+ LE RLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRKIYAEAERVKGDTGEMLVGLLERRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNIGSYRCKEGDVI+V+++S+QLA VLEA+QLAERDVP+YI V++ M ATFV Sbjct: 121 VTVNGQRVNIGSYRCKEGDVIQVRERSRQLAIVLEATQLAERDVPDYIEVDYSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R PS L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPS-LGDVPYPVVMEPNLVVEFYAK 205 >gi|163737823|ref|ZP_02145240.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107] gi|163742871|ref|ZP_02150255.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis 2.10] gi|161383835|gb|EDQ08220.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis 2.10] gi|161389349|gb|EDQ13701.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107] Length = 206 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 145/206 (70%), Positives = 173/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYSEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KSKQ+ ++LEA QLAERDVP+Y+ +H M ATFV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQMTALLEAVQLAERDVPDYVEADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RAPG-LSDVPYPVVMEPNLVVEFYAK 205 >gi|294852185|ref|ZP_06792858.1| 30S ribosomal protein S4 [Brucella sp. NVSL 07-0026] gi|294820774|gb|EFG37773.1| 30S ribosomal protein S4 [Brucella sp. NVSL 07-0026] Length = 205 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V M+PNLVVEFYSR Sbjct: 181 RVPG-LSDVPYVVQMEPNLVVEFYSR 205 >gi|256060939|ref|ZP_05451097.1| 30S ribosomal protein S4 [Brucella neotomae 5K33] gi|261324939|ref|ZP_05964136.1| 30S ribosomal protein S4 [Brucella neotomae 5K33] gi|261300919|gb|EEY04416.1| 30S ribosomal protein S4 [Brucella neotomae 5K33] Length = 205 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 151/206 (73%), Positives = 173/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAVVLEAVQLAERDVPDYIDVDHNKMVATYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V +PNLVVEFYSR Sbjct: 181 RVPG-LSDVPYAVQTEPNLVVEFYSR 205 >gi|84514475|ref|ZP_01001839.1| 30S ribosomal protein S4 [Loktanella vestfoldensis SKA53] gi|84511526|gb|EAQ07979.1| 30S ribosomal protein S4 [Loktanella vestfoldensis SKA53] Length = 206 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 147/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRTAAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+QKSKQL VL A+QLAERDVP+Y+ V+H+ M+ATFV Sbjct: 121 VTVNGQRVNIPSYRVKEGDVIEVRQKSKQLEIVLVAAQLAERDVPDYMEVDHNKMIATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ L DVPYPV M+PNLVVEFY++ Sbjct: 181 RTPT-LGDVPYPVTMEPNLVVEFYAK 205 >gi|150396726|ref|YP_001327193.1| 30S ribosomal protein S4 [Sinorhizobium medicae WSM419] gi|171460831|sp|A6U9M8|RS4_SINMW RecName: Full=30S ribosomal protein S4 gi|150028241|gb|ABR60358.1| RNA-binding S4 domain protein [Sinorhizobium medicae WSM419] Length = 205 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 159/206 (77%), Positives = 178/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI EK+FR+IF EA R +GDT NL+ LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDIREKQFRAIFAEASRRKGDTPENLVGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEVK+ SKQL +VLEA QLAERDVP+YI +H+ MVATFV Sbjct: 121 VKVNGVRVNIGSYRCKPGDVIEVKESSKQLVTVLEAVQLAERDVPDYIEADHNKMVATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYPVIM+P+LVVEFYSR Sbjct: 181 RVPA-LADVPYPVIMEPHLVVEFYSR 205 >gi|118588602|ref|ZP_01546010.1| 30S ribosomal protein S4 [Stappia aggregata IAM 12614] gi|118438588|gb|EAV45221.1| 30S ribosomal protein S4 [Stappia aggregata IAM 12614] Length = 205 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 145/206 (70%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S K+KIDRR+GEN+WGRPKSP N R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRHSVKYKIDRRMGENIWGRPKSPANKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR ++ EA R +GDTS NLI LE RLD IVYRAKFVPT+FAARQF+NH H Sbjct: 61 YYGNISEKQFRKVYAEASRMKGDTSENLIGLLERRLDAIVYRAKFVPTVFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY+ + GDVIEV++KSKQLA VLEA Q AERDVP+Y+ V+H+ M AT+ Sbjct: 121 VKVNGKRVNISSYQIRPGDVIEVREKSKQLALVLEAVQSAERDVPDYLDVDHNKMTATYS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P DVPYPV M+PNLVVEFYSR Sbjct: 181 RVPG-FSDVPYPVQMEPNLVVEFYSR 205 >gi|241204876|ref|YP_002975972.1| 30S ribosomal protein S4 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858766|gb|ACS56433.1| ribosomal protein S4 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 205 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 157/206 (76%), Positives = 177/206 (85%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+IF EADR +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV++KSKQL VLEA LAERDVP+YI V+H MVATF Sbjct: 121 VSVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLEAVSLAERDVPDYIEVDHSKMVATFG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVP+PV+M+P+LVVEFYSR Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205 >gi|126733337|ref|ZP_01749084.1| 30S ribosomal protein S4 [Roseobacter sp. CCS2] gi|126716203|gb|EBA13067.1| 30S ribosomal protein S4 [Roseobacter sp. CCS2] Length = 206 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 146/206 (70%), Positives = 170/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRTAAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+QKSKQL VL ASQL ERDVP+Y+ V+H+ M ATF Sbjct: 121 VTVNGKKVNIPSYRVKEGDVIEVRQKSKQLELVLVASQLPERDVPDYMDVDHNKMTATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVEFY++ Sbjct: 181 RTPG-LGDVPYPVTMEPNLVVEFYAK 205 >gi|86357927|ref|YP_469819.1| 30S ribosomal protein S4 [Rhizobium etli CFN 42] gi|123511793|sp|Q2K7U4|RS4_RHIEC RecName: Full=30S ribosomal protein S4 gi|86282029|gb|ABC91092.1| 30S ribosomal protein S4 [Rhizobium etli CFN 42] Length = 205 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 156/206 (75%), Positives = 178/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+IF EA R +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRAIFAEAARRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV++KSKQL +VLEA LAERDVP+YI V+H+ MVATF Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVTVLEAVSLAERDVPDYIEVDHNKMVATFG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVP+PV+M+P+LVVEFYSR Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205 >gi|83854847|ref|ZP_00948377.1| 30S ribosomal protein S4 [Sulfitobacter sp. NAS-14.1] gi|83941370|ref|ZP_00953832.1| 30S ribosomal protein S4 [Sulfitobacter sp. EE-36] gi|83842690|gb|EAP81857.1| 30S ribosomal protein S4 [Sulfitobacter sp. NAS-14.1] gi|83847190|gb|EAP85065.1| 30S ribosomal protein S4 [Sulfitobacter sp. EE-36] Length = 206 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 144/206 (69%), Positives = 173/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTAAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQ+ ++LEA+QLAERDVP+YI +H M ATFV Sbjct: 121 VKVNGKKVNIPSYRVKEGDVIEVRDRSKQMVALLEATQLAERDVPDYIEADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPA-LGDVPYPVMMEPNLVVEFYAK 205 >gi|256369260|ref|YP_003106768.1| 30S ribosomal protein S4 [Brucella microti CCM 4915] gi|255999420|gb|ACU47819.1| 30S ribosomal protein S4 [Brucella microti CCM 4915] Length = 205 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 151/206 (73%), Positives = 173/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MV T+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVTTYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V M+PNLVVEFYSR Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205 >gi|209549541|ref|YP_002281458.1| 30S ribosomal protein S4 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226699111|sp|B5ZRF1|RS4_RHILW RecName: Full=30S ribosomal protein S4 gi|209535297|gb|ACI55232.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 205 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 157/206 (76%), Positives = 178/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+IF EADR +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV++KSKQL VLEA LAERDVP+YI V+H+ MVATF Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLEAVSLAERDVPDYIEVDHNKMVATFG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVP+PV+M+P+LVVEFYSR Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205 >gi|312112941|ref|YP_004010537.1| ribosomal protein S4 [Rhodomicrobium vannielii ATCC 17100] gi|311218070|gb|ADP69438.1| ribosomal protein S4 [Rhodomicrobium vannielii ATCC 17100] Length = 205 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 141/206 (68%), Positives = 168/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+KHKIDRR+GENLWGRPKSP+N R YGPG HGQRR+ K S FG QL+AKQK+K Sbjct: 1 MTKRASAKHKIDRRLGENLWGRPKSPLNKREYGPGQHGQRRRGKTSDFGTQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+E++FR I+ EA R RGDTS NLI LE RLD +VYRAKFV T FAARQF++H H Sbjct: 61 YYGNITERQFRLIYAEATRLRGDTSENLIGLLERRLDAVVYRAKFVATPFAARQFISHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SYRC+ GDVIEV++K+K LA VLEA+Q AERDVP+Y+ V+H + A Sbjct: 121 ISVNGRRVNIPSYRCRAGDVIEVREKAKPLAFVLEATQSAERDVPDYLEVDHGKLTARLS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVPYPV+M+PNLVVEFYSR Sbjct: 181 RIPQ-LSDVPYPVVMEPNLVVEFYSR 205 >gi|190891998|ref|YP_001978540.1| 30S ribosomal protein S4 [Rhizobium etli CIAT 652] gi|218509562|ref|ZP_03507440.1| 30S ribosomal protein S4 [Rhizobium etli Brasil 5] gi|218516811|ref|ZP_03513651.1| 30S ribosomal protein S4 [Rhizobium etli 8C-3] gi|218679612|ref|ZP_03527509.1| 30S ribosomal protein S4 [Rhizobium etli CIAT 894] gi|226699110|sp|B3PPT3|RS4_RHIE6 RecName: Full=30S ribosomal protein S4 gi|190697277|gb|ACE91362.1| 30S ribosomal protein S4 [Rhizobium etli CIAT 652] gi|327190532|gb|EGE57626.1| 30S ribosomal protein S4 [Rhizobium etli CNPAF512] Length = 205 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 157/206 (76%), Positives = 179/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+IF EADR +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV++KSKQL +VLEA LAERDVP+YI V+H+ MVATF Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVTVLEAVSLAERDVPDYIEVDHNKMVATFG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVP+PV+M+P+LVVEFYSR Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205 >gi|153009724|ref|YP_001370939.1| 30S ribosomal protein S4 [Ochrobactrum anthropi ATCC 49188] gi|171704561|sp|A6X1K6|RS4_OCHA4 RecName: Full=30S ribosomal protein S4 gi|151561612|gb|ABS15110.1| RNA-binding S4 domain protein [Ochrobactrum anthropi ATCC 49188] Length = 205 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 149/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VN+ SYR K GDV+EV++KSKQL VLEA QLAERDVP+YI V+H+ +VAT+ Sbjct: 121 VNVNGRRVNVQSYRLKTGDVVEVREKSKQLVIVLEAVQLAERDVPDYIEVDHNKLVATYS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPY V M+PNLVVEFYSR Sbjct: 181 RVPT-LTDVPYAVQMEPNLVVEFYSR 205 >gi|116252370|ref|YP_768208.1| 30S ribosomal protein S4 [Rhizobium leguminosarum bv. viciae 3841] gi|152112254|sp|Q1MG11|RS4_RHIL3 RecName: Full=30S ribosomal protein S4 gi|115257018|emb|CAK08112.1| putative 30S ribosomal protein S4 [Rhizobium leguminosarum bv. viciae 3841] Length = 205 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 157/206 (76%), Positives = 178/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+IF EADR +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV++KSKQL VLEA LAERDVP+YI V+H+ MVATF Sbjct: 121 VSVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLEAVSLAERDVPDYIEVDHNKMVATFG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVP+PV+M+P+LVVEFYSR Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205 >gi|114766790|ref|ZP_01445724.1| 30S ribosomal protein S4 [Pelagibaca bermudensis HTCC2601] gi|114540984|gb|EAU44042.1| 30S ribosomal protein S4 [Roseovarius sp. HTCC2601] Length = 206 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 147/204 (72%), Positives = 171/204 (83%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGR KSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRAKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT +LI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFGEAERLKGDTGEHLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KSKQLA VLEA+QL ERDVP+Y+ V+H M A+FV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQLAVVLEAAQLPERDVPDYLEVDHSKMTASFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV M+PNLV+EFY Sbjct: 181 RTPG-LADVPYPVQMEPNLVIEFY 203 >gi|119387008|ref|YP_918063.1| 30S ribosomal protein S4 [Paracoccus denitrificans PD1222] gi|152112241|sp|A1BA23|RS4_PARDP RecName: Full=30S ribosomal protein S4 gi|119377603|gb|ABL72367.1| SSU ribosomal protein S4P [Paracoccus denitrificans PD1222] Length = 206 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 170/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++K+KIDRR+GEN+WGR KSP+N R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRTAAKYKIDRRMGENIWGRAKSPLNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD ++YRAKFVPTIFAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVIYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDV+ ++++S+QLA VLE+ LAERDVP+Y+ V+H+ M ATFV Sbjct: 121 VEVNGKRVNIASYRVKEGDVVSIRERSRQLAIVLESVGLAERDVPDYLEVDHNKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ L DVPY V M+PNLVVEFY++ Sbjct: 181 RTPA-LGDVPYAVQMEPNLVVEFYAK 205 >gi|154248016|ref|YP_001418974.1| 30S ribosomal protein S4 [Xanthobacter autotrophicus Py2] gi|226701078|sp|A7IMS4|RS4_XANP2 RecName: Full=30S ribosomal protein S4 gi|154162101|gb|ABS69317.1| RNA-binding S4 domain protein [Xanthobacter autotrophicus Py2] Length = 205 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR ++KHKIDRR+GEN+WGR KSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRIAAKHKIDRRMGENIWGRSKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG I EK+F ++ EA R +GDT NLI LE RLD +VYRAKFVPTIFAARQFV+H H Sbjct: 61 YYGSIGEKQFHKVYVEASRLKGDTGANLIGLLERRLDAVVYRAKFVPTIFAARQFVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY K GDV+EVK+ S+Q+ VLEA QL ERDVP+YI ++ + A F Sbjct: 121 VKVNGQRVNIPSYLVKVGDVVEVKEASRQMTLVLEAQQLGERDVPDYIELDAGKLAARFA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L +VPYPV M+PNLVVEFYSR Sbjct: 181 RIPE-LNEVPYPVQMEPNLVVEFYSR 205 >gi|254459623|ref|ZP_05073039.1| ribosomal protein S4 [Rhodobacterales bacterium HTCC2083] gi|206676212|gb|EDZ40699.1| ribosomal protein S4 [Rhodobacteraceae bacterium HTCC2083] Length = 206 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 144/204 (70%), Positives = 172/204 (84%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKAKVSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+ IFKEADR +GDT NLI LE RLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 YYGDLTEKQFKKIFKEADRVKGDTGENLIGLLERRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDV+EV+ +SKQ+A++LEA QL ERDVP+Y+ V+H + ATF Sbjct: 121 VRVNGKKVNIASYRVKEGDVVEVRDRSKQMAAILEAVQLPERDVPDYMDVDHSKLTATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+E+Y Sbjct: 181 RTPG-LSDVPYPVLMEPNLVIEYY 203 >gi|15965540|ref|NP_385893.1| 30S ribosomal protein S4 [Sinorhizobium meliloti 1021] gi|307302660|ref|ZP_07582416.1| ribosomal protein S4 [Sinorhizobium meliloti BL225C] gi|307318507|ref|ZP_07597941.1| ribosomal protein S4 [Sinorhizobium meliloti AK83] gi|26399445|sp|Q92PG9|RS4_RHIME RecName: Full=30S ribosomal protein S4 gi|15074721|emb|CAC46366.1| Probable 30S ribosomal subunit protein S4 [Sinorhizobium meliloti 1021] gi|306895847|gb|EFN26599.1| ribosomal protein S4 [Sinorhizobium meliloti AK83] gi|306903024|gb|EFN33615.1| ribosomal protein S4 [Sinorhizobium meliloti BL225C] Length = 205 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 159/206 (77%), Positives = 179/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI EK+FR+IF EA R +GDT NL+ LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDIREKQFRAIFAEASRRKGDTPENLVGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEVK+KSKQL +VLEA QLAERDVP+YI +H+ MVATFV Sbjct: 121 VKVNGVRVNIGSYRCKPGDVIEVKEKSKQLVTVLEAVQLAERDVPDYIEADHNKMVATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYPV+M+P+LVVEFYSR Sbjct: 181 RVPA-LSDVPYPVVMEPHLVVEFYSR 205 >gi|254510000|ref|ZP_05122067.1| ribosomal protein S4 [Rhodobacteraceae bacterium KLH11] gi|221533711|gb|EEE36699.1| ribosomal protein S4 [Rhodobacteraceae bacterium KLH11] Length = 206 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 168/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA R GDT NLI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAVRVNGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ KSKQLA VLEA LAERDVP+YI +H M ATFV Sbjct: 121 VKVNGKRVNIPSYRVKEGDVIEVRDKSKQLAVVLEAVALAERDVPDYIDADHSKMAATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RAPG-LGDVPYPVVMEPNLVVEFYAK 205 >gi|84500119|ref|ZP_00998385.1| 30S ribosomal protein S4 [Oceanicola batsensis HTCC2597] gi|84392053|gb|EAQ04321.1| 30S ribosomal protein S4 [Oceanicola batsensis HTCC2597] Length = 206 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 144/204 (70%), Positives = 171/204 (83%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+ I+ EA R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFKRIYSEAARVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KS+Q+A VLEA+QL ERDVP+Y+ +H M ATFV Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSRQMALVLEAAQLPERDVPDYLDADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+E+Y Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEYY 203 >gi|254470314|ref|ZP_05083718.1| ribosomal protein S4 [Pseudovibrio sp. JE062] gi|211960625|gb|EEA95821.1| ribosomal protein S4 [Pseudovibrio sp. JE062] Length = 205 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 150/206 (72%), Positives = 172/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+S+K+KIDRR+GEN+WGRPKSP N R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRQSAKYKIDRRMGENIWGRPKSPANRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR ++ EA R RGDTS NLI LE RLD IVYRAKFVPT+FAARQF+NH H Sbjct: 61 YYGNISEKQFRKVYDEASRQRGDTSENLIGLLECRLDAIVYRAKFVPTVFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNIGSY CK GDVIEV++KSKQLA VLEA Q AERD P+YI V+ + +VAT+ Sbjct: 121 VNVNGRRVNIGSYMCKPGDVIEVREKSKQLAIVLEAVQSAERDTPDYIDVDTNKLVATYS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPYPV M+PNLVVEFYSR Sbjct: 181 RIPA-FGDVPYPVQMEPNLVVEFYSR 205 >gi|218462357|ref|ZP_03502448.1| 30S ribosomal protein S4 [Rhizobium etli Kim 5] Length = 205 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 155/206 (75%), Positives = 178/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+IF EA R +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRAIFAEASRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV++KSKQL +VLEA LAERDVP+YI V+H+ MVAT+ Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVTVLEAVSLAERDVPDYIEVDHNKMVATYG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVP+PV+M+P+LVVEFYSR Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205 >gi|58040211|ref|YP_192175.1| 30S ribosomal protein S4 [Gluconobacter oxydans 621H] gi|81672625|sp|Q5FQ27|RS4_GLUOX RecName: Full=30S ribosomal protein S4 gi|58002625|gb|AAW61519.1| SSU ribosomal protein S4P [Gluconobacter oxydans 621H] Length = 205 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 137/206 (66%), Positives = 157/206 (76%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K Sbjct: 1 MSKRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKQKPSDFSIQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR + EA R +GDTS NLI LE RLD +VYR KF T FA+RQF++H H Sbjct: 61 YYGNISEKQFRKYYDEAVRRKGDTSENLIGLLERRLDAVVYRLKFAITPFASRQFISHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY KEGDVIEV+ SKQLA VL+A Q ERD PEY+ V+H M TF+ Sbjct: 121 VTVNGKKVNIPSYLVKEGDVIEVRDSSKQLAIVLDAVQTGERDTPEYVEVDHRQMKGTFL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVEFYSR Sbjct: 181 RTPV-LSDVPYPVQMEPNLVVEFYSR 205 >gi|222086151|ref|YP_002544683.1| ribosomal protein S4 [Agrobacterium radiobacter K84] gi|254764561|sp|B9JFR5|RS4_AGRRK RecName: Full=30S ribosomal protein S4 gi|221723599|gb|ACM26755.1| ribosomal protein S4 [Agrobacterium radiobacter K84] Length = 205 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 154/206 (74%), Positives = 175/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR+ F EA+R +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLREKQFRATFDEANRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV++KSKQL VLE+ LAERDVP+YI V+H+ MVATF Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLESVSLAERDVPDYIEVDHNKMVATFA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPY V+M+P LVVEFYSR Sbjct: 181 RVPT-LADVPYAVVMEPQLVVEFYSR 205 >gi|254504798|ref|ZP_05116949.1| ribosomal protein S4 [Labrenzia alexandrii DFL-11] gi|222440869|gb|EEE47548.1| ribosomal protein S4 [Labrenzia alexandrii DFL-11] Length = 205 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 141/206 (68%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRHSVKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR ++ EA R +GDTS NLI LE RLD ++YRAKFVPT+FAARQF+NH H Sbjct: 61 YYGNISEKQFRKVYAEASRLKGDTSENLIGLLERRLDAVIYRAKFVPTVFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY+ + GDV+EV+++SKQLA VLEA Q AERDVP+Y+ +H M AT+ Sbjct: 121 VKVNGKRVNIPSYQLRPGDVVEVRERSKQLAIVLEAVQSAERDVPDYVDADHAKMTATYS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ DVPYPV M+PNLVVEFYSR Sbjct: 181 RVPA-FSDVPYPVQMEPNLVVEFYSR 205 >gi|126728329|ref|ZP_01744145.1| 30S ribosomal protein S4 [Sagittula stellata E-37] gi|126711294|gb|EBA10344.1| 30S ribosomal protein S4 [Sagittula stellata E-37] Length = 206 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 143/204 (70%), Positives = 175/204 (85%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTTAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKQKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF +A+R++GDT LI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFSDAERAKGDTGELLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR KEGDVIEV++KSKQ+A++LEA+QL ERDVP+YI V+H+ + A+FV Sbjct: 121 VLVNGQRVNIPSYRVKEGDVIEVREKSKQMAAILEATQLPERDVPDYIEVDHNKLTASFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+E+Y Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEYY 203 >gi|110680562|ref|YP_683569.1| 30S ribosomal protein S4 [Roseobacter denitrificans OCh 114] gi|122972607|sp|Q163G0|RS4_ROSDO RecName: Full=30S ribosomal protein S4 gi|109456678|gb|ABG32883.1| ribosomal protein S4 [Roseobacter denitrificans OCh 114] Length = 206 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 144/206 (69%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH+H Sbjct: 61 YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHKH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQ+ +++EA+QLAERDVP+YI +H M ATFV Sbjct: 121 VRVNGKIVNIPSYRVKEGDVIEVRDRSKQMVALIEATQLAERDVPDYIEADHSKMQATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPA-LGDVPYPVMMEPNLVVEFYAK 205 >gi|27380817|ref|NP_772346.1| 30S ribosomal protein S4 [Bradyrhizobium japonicum USDA 110] gi|41017838|sp|Q89ID3|RS4_BRAJA RecName: Full=30S ribosomal protein S4 gi|27353982|dbj|BAC50971.1| 30S ribosomal protein S4 [Bradyrhizobium japonicum USDA 110] Length = 205 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 165/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F I+ EA R +GDT NLI LE RLD +VYRAKFV TIFAARQF+NH H Sbjct: 61 YYANISERQFHGIYVEASRLKGDTGENLIGLLERRLDAVVYRAKFVSTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY+ K GDV+EVK+ SKQLA VLEASQL ERD P+Y+ V+H M A ++ Sbjct: 121 IKVNGRKVNISSYQLKVGDVVEVKEASKQLAHVLEASQLPERDTPDYLDVDHGKMTAKYI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+PV M+P+LVVEFYSR Sbjct: 181 RIPG-LSDVPFPVQMEPHLVVEFYSR 205 >gi|329113307|ref|ZP_08242088.1| 30S ribosomal protein S4 [Acetobacter pomorum DM001] gi|326697132|gb|EGE48792.1| 30S ribosomal protein S4 [Acetobacter pomorum DM001] Length = 236 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 165/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K Sbjct: 32 MSKRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKGKPSDFSVQLMAKQKLKG 91 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+FR ++EA R +GDTS NLI+ LE RLD +VYR KF T FA+RQF++H H Sbjct: 92 YYGNITEKQFRRYYQEAVRRKGDTSENLINLLERRLDAVVYRMKFAITPFASRQFISHGH 151 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ +NI SY K+GDVIEV++KSKQLA VL+A+Q AERDVPEY+ V+H M T++ Sbjct: 152 ILVNGKKMNIPSYLVKDGDVIEVREKSKQLAIVLDAAQSAERDVPEYMEVDHRQMKGTYL 211 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVE+YSR Sbjct: 212 RGPQ-LSDVPYPVQMEPNLVVEYYSR 236 >gi|163759587|ref|ZP_02166672.1| 30S ribosomal protein S4 [Hoeflea phototrophica DFL-43] gi|162283184|gb|EDQ33470.1| 30S ribosomal protein S4 [Hoeflea phototrophica DFL-43] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 154/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDISEK+FR I+ EA+R +GDT NLI LESRLD IVYRAKFV TIFAARQFVNH H Sbjct: 61 YYGDISEKQFRKIYDEANRMKGDTPENLIGLLESRLDAIVYRAKFVATIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG NIGSYRCK GDVIEVK+KSKQL VLE+ LAERDVPEY+ +H+ MVAT+ Sbjct: 121 VKVNGVRTNIGSYRCKPGDVIEVKEKSKQLTLVLESVGLAERDVPEYVEADHNKMVATYT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYPV M+PNLVVEFYSR Sbjct: 181 RVPN-LSDVPYPVQMEPNLVVEFYSR 205 >gi|121602011|ref|YP_989114.1| 30S ribosomal protein S4 [Bartonella bacilliformis KC583] gi|152060935|sp|A1UT11|RS4_BARBK RecName: Full=30S ribosomal protein S4 gi|120614188|gb|ABM44789.1| ribosomal protein S4 [Bartonella bacilliformis KC583] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 149/206 (72%), Positives = 171/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRRIGEN+WGRPKSPVN R YGPG HGQRRK K S +G+QL AKQK+K Sbjct: 1 MSKRESAKYKIDRRIGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLCAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR I++EA R RGDT NLI LESRLD IVYR+KFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKIYQEAVRRRGDTGENLIGLLESRLDAIVYRSKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIE++++SKQL VLEA+QL ERDVP+YI +H M ATFV Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEIRERSKQLLLVLEATQLNERDVPDYIEADHSKMKATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FSDVPYAVQMEPNLVVEFYSR 205 >gi|319404221|emb|CBI77814.1| 30S ribosomal protein S4 [Bartonella rochalimae ATCC BAA-1498] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 150/206 (72%), Positives = 172/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRE++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRETTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R RGDT NLI LESRLD +VYRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAVVYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLE+ QLAERD+PEYI V+H+ M ATF Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESIQLAERDIPEYIDVDHNKMKATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FADVPYAVHMEPNLVVEFYSR 205 >gi|256044506|ref|ZP_05447410.1| 30S ribosomal protein S4 [Brucella melitensis bv. 1 str. Rev.1] gi|265990930|ref|ZP_06103487.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. Rev.1] gi|263001714|gb|EEZ14289.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. Rev.1] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 151/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPY V M+PNLVV+FYSR Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVKFYSR 205 >gi|149913680|ref|ZP_01902213.1| 30S ribosomal protein S4 [Roseobacter sp. AzwK-3b] gi|149812800|gb|EDM72629.1| 30S ribosomal protein S4 [Roseobacter sp. AzwK-3b] Length = 206 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF++A+R RGDT L+ LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFRDAERQRGDTGELLVGLLERRLDAVVYRAKFVPTMFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR +EGDVIEV+ +SKQLA +LEA QLAERDVP+Y+ V+H MVATFV Sbjct: 121 VRVNGRKVNIPSYRVQEGDVIEVRNRSKQLAVLLEAVQLAERDVPDYLEVDHSKMVATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPVIM+PNLV+EFY Sbjct: 181 RTPG-LADVPYPVIMEPNLVIEFY 203 >gi|307945603|ref|ZP_07660939.1| ribosomal protein S4 [Roseibium sp. TrichSKD4] gi|307771476|gb|EFO30701.1| ribosomal protein S4 [Roseibium sp. TrichSKD4] Length = 205 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 141/206 (68%), Positives = 166/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S K+KIDRR+GEN+WGRPKSP N R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRHSVKYKIDRRMGENIWGRPKSPANKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+F ++ EA R +GDTS NLI LE RLD I+YRAKFVPT+FAARQF+NH H Sbjct: 61 YYGNISEKQFHKVYVEASRMKGDTSENLIGLLERRLDAIIYRAKFVPTVFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SYR + GDVIEV++KSKQ+ VLEA Q AERDVP+Y+ +H M AT+ Sbjct: 121 IKVNGKRVNIPSYRVRPGDVIEVREKSKQMGLVLEAVQSAERDVPDYVDADHAKMTATYS 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+PS DVPYPV M+PNLVVEFYSR Sbjct: 181 RVPS-FADVPYPVQMEPNLVVEFYSR 205 >gi|148256683|ref|YP_001241268.1| 30S ribosomal protein S4 [Bradyrhizobium sp. BTAi1] gi|172047313|sp|A5EMG8|RS4_BRASB RecName: Full=30S ribosomal protein S4 gi|146408856|gb|ABQ37362.1| SSU ribosomal protein S4P [Bradyrhizobium sp. BTAi1] Length = 205 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F I+ EA R +GDT NLI LE RLDT+V+RAKFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHGIYVEAGRLKGDTGENLIGILERRLDTVVFRAKFVSTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY+ K GDVIEVK+ SKQLA VLEA+QLAERDVP+YI +H M A F+ Sbjct: 121 IKVNGRKVNIASYQVKPGDVIEVKEASKQLAIVLEATQLAERDVPDYIEADHSKMTAKFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205 >gi|319407231|emb|CBI80870.1| 30S ribosomal protein S4 [Bartonella sp. 1-1C] Length = 205 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 152/206 (73%), Positives = 172/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRE++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRETTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R RGDT NLI LESRLD IVYRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLE+ QLAERDVPEYI V+H+ M ATF Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPEYIDVDHNKMKATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FADVPYAVHMEPNLVVEFYSR 205 >gi|146339797|ref|YP_001204845.1| 30S ribosomal protein S4 [Bradyrhizobium sp. ORS278] gi|172046996|sp|A4YRT2|RS4_BRASO RecName: Full=30S ribosomal protein S4 gi|146192603|emb|CAL76608.1| 30S ribosomal subunit protein S4 [Bradyrhizobium sp. ORS278] Length = 205 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F I+ EA R +GDT NLI LE RLDT+V+RAKFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHGIYVEAGRLKGDTGENLIGILERRLDTVVFRAKFVSTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY+ K GDVIEVK+ SKQLA VLEA+QLAERDVP+YI +H M A F+ Sbjct: 121 IKVNGRKVNIASYQVKPGDVIEVKEASKQLAVVLEATQLAERDVPDYIEADHSKMTAKFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205 >gi|328543189|ref|YP_004303298.1| 30S ribosomal protein S4 [Polymorphum gilvum SL003B-26A1] gi|326412935|gb|ADZ69998.1| 30S ribosomal protein S4 [Polymorphum gilvum SL003B-26A1] Length = 205 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 146/206 (70%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRHSVKHKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+F+ ++ EA R +GDTS NLI LE RLD IVYRAKFVPT+FAARQFV+H H Sbjct: 61 YYGNISEKQFQKVYTEASRMKGDTSENLIGLLERRLDAIVYRAKFVPTVFAARQFVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V IGSYRC+ GDVIEV+++SKQ+ VLEA+Q ERDVP+YI +H M ATF Sbjct: 121 VKVNGKRVTIGSYRCRPGDVIEVRERSKQMVLVLEAAQSGERDVPDYIDADHGKMTATFA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIPS +VPYPV M+PNLVVEFYSR Sbjct: 181 RIPS-FSEVPYPVQMEPNLVVEFYSR 205 >gi|227822183|ref|YP_002826154.1| 30S ribosomal protein S4 [Sinorhizobium fredii NGR234] gi|254764606|sp|C3MD82|RS4_RHISN RecName: Full=30S ribosomal protein S4 gi|227341183|gb|ACP25401.1| 30S ribosomal protein S4 [Sinorhizobium fredii NGR234] Length = 205 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 160/206 (77%), Positives = 179/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI EK+FR+IF EA R +GDT NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDIREKQFRAIFAEASRRKGDTPENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEVK+KSKQL SVLE+ QLAERDVP+YI +H+ MVATFV Sbjct: 121 VKVNGVRVNIGSYRCKAGDVIEVKEKSKQLVSVLESVQLAERDVPDYIEADHNKMVATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYPV+M+P+LVVEFYSR Sbjct: 181 RVPA-LTDVPYPVVMEPHLVVEFYSR 205 >gi|163793622|ref|ZP_02187597.1| Ribosomal protein S4 [alpha proteobacterium BAL199] gi|159181424|gb|EDP65939.1| Ribosomal protein S4 [alpha proteobacterium BAL199] Length = 204 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 134/206 (65%), Positives = 167/206 (81%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KRE +KHKIDRR+G NLWGRPKSP+N R YGPG HGQRR+ KPS +G+QL AKQK+K Sbjct: 1 MAKREQAKHKIDRRLGVNLWGRPKSPLNNREYGPGQHGQRRR-KPSDYGIQLMAKQKLKG 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I EK+FR + EA R RGDT NL+ LESRLD ++YR KFVPT+FAARQFV+H H Sbjct: 60 YYGNIGEKQFRKYYAEAVRRRGDTGENLVGILESRLDAVIYRMKFVPTVFAARQFVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VN+ S+ K+GDVIEVK+KS++L VLEA Q +ERD+P+Y+ V+H M TF+ Sbjct: 120 VKVNGRRVNVPSFMVKDGDVIEVKEKSRELPMVLEAVQSSERDLPDYMEVDHSAMKGTFL 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L+DVPYPV M+PNLV+E+YSR Sbjct: 180 RLP-KLEDVPYPVQMEPNLVIEYYSR 204 >gi|330993329|ref|ZP_08317264.1| 30S ribosomal protein S4 [Gluconacetobacter sp. SXCC-1] gi|329759359|gb|EGG75868.1| 30S ribosomal protein S4 [Gluconacetobacter sp. SXCC-1] Length = 205 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K Sbjct: 1 MSKRLESKYKINRRLGVNLWGRAKSPVNKREYGPGQHGQRRKQKPSDFSVQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I EK+FR + EA R +GDTS NLI LE RLD +VYR KF T FAARQF++H H Sbjct: 61 YYGNIGEKQFRKYYDEAVRRKGDTSENLIDLLERRLDAVVYRLKFAITPFAARQFISHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY ++GDVIEV++KSKQLA VL+A+Q ERDVPEY+ V+H M +F+ Sbjct: 121 ITVNGRKVNIPSYLVRDGDVIEVREKSKQLAIVLDAAQSGERDVPEYLEVDHRQMKGSFL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLV+EFYSR Sbjct: 181 RSP-KLSDVPYPVQMEPNLVIEFYSR 205 >gi|240850639|ref|YP_002972039.1| 30S ribosomal protein S4 [Bartonella grahamii as4aup] gi|240267762|gb|ACS51350.1| 30S ribosomal protein S4 [Bartonella grahamii as4aup] Length = 205 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 147/206 (71%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+F ++EA R RGDT NLI LESRLD +VYRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFHKTYEEAARRRGDTGENLIGLLESRLDAVVYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLE+ QLAERDVP+YI +H M ATF Sbjct: 121 VSVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPDYIEADHKQMKATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205 >gi|325293260|ref|YP_004279124.1| 30S ribosomal protein S4 [Agrobacterium sp. H13-3] gi|325061113|gb|ADY64804.1| 30S ribosomal protein S4 [Agrobacterium sp. H13-3] Length = 205 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 153/206 (74%), Positives = 178/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG++ EK+FR+ + EA+R +GDTS NLI LESRLD IVYRAKFVPT+FA+RQF+NH H Sbjct: 61 YYGELREKQFRATYDEANRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV+QKSKQL +VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VTVNGVRVNIGSYRCKPGDVIEVRQKSKQLVTVLEAVQLAERDVPDYIEVDHNKMVATYA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVPYPV+M+P+LVVEFYSR Sbjct: 181 RIPA-LSDVPYPVVMEPHLVVEFYSR 205 >gi|90420933|ref|ZP_01228838.1| 30S ribosomal protein S4 [Aurantimonas manganoxydans SI85-9A1] gi|90334908|gb|EAS48680.1| 30S ribosomal protein S4 [Aurantimonas manganoxydans SI85-9A1] Length = 205 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 153/206 (74%), Positives = 172/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRASAKYKIDRRMGENIWGRPKSPVNRRQYGPGQHGQRRKGKVSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+SEK+FR I++EA R +GDTS NLI LESRLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 YYGDVSEKQFRKIYEEAARRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG NI SY CK GDVIEV+QKSKQL +LE+ QLAERDVPEYI V+H MVAT+ Sbjct: 121 VNVNGVRTNIQSYVCKPGDVIEVRQKSKQLTIILESVQLAERDVPEYIEVDHQKMVATYQ 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVPYPV M+PNLVVEFYSR Sbjct: 181 RVPG-LHDVPYPVQMEPNLVVEFYSR 205 >gi|85704146|ref|ZP_01035249.1| 30S ribosomal protein S4 [Roseovarius sp. 217] gi|85671466|gb|EAQ26324.1| 30S ribosomal protein S4 [Roseovarius sp. 217] Length = 206 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 146/204 (71%), Positives = 167/204 (81%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKVSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT LI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFAEAERIKGDTGETLIGLLERRLDAVVYRAKFVATMFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNI SYR KEGDVIEV+ +SKQ+A +LEA QLAERDVP+YI +H M ATFV Sbjct: 121 VTVNGNRVNIPSYRVKEGDVIEVRDRSKQIAVLLEAVQLAERDVPDYIDADHSKMKATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPVIM+PNLV+EFY Sbjct: 181 RQPG-LSDVPYPVIMEPNLVIEFY 203 >gi|163868316|ref|YP_001609525.1| 30S ribosomal protein S4 [Bartonella tribocorum CIP 105476] gi|189045364|sp|A9IU99|RS4_BART1 RecName: Full=30S ribosomal protein S4 gi|161017972|emb|CAK01530.1| 30S ribosomal protein S4 [Bartonella tribocorum CIP 105476] Length = 205 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 147/206 (71%), Positives = 168/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+F + EA R RGDT NLI LESRLD +VYRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFHKTYVEAARRRGDTGENLIGLLESRLDAVVYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLE+ QLAERDVP+YI +H M ATF Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPDYIEADHKQMKATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205 >gi|163732311|ref|ZP_02139757.1| 30S ribosomal protein S4 [Roseobacter litoralis Och 149] gi|161394609|gb|EDQ18932.1| 30S ribosomal protein S4 [Roseobacter litoralis Och 149] Length = 206 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 144/206 (69%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH+H Sbjct: 61 YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVSTVFAARQFVNHKH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQ+A+++EA+QLAERDVP+YI +H M A FV Sbjct: 121 VRVNGQIVNIPSYRVKEGDVIEVRDRSKQMAALIEATQLAERDVPDYIEADHSKMHAKFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ L DVPYPV+M+PNLVVEFY++ Sbjct: 181 RTPA-LGDVPYPVMMEPNLVVEFYAK 205 >gi|114704639|ref|ZP_01437547.1| 30S ribosomal protein S4 [Fulvimarina pelagi HTCC2506] gi|114539424|gb|EAU42544.1| 30S ribosomal protein S4 [Fulvimarina pelagi HTCC2506] Length = 205 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 149/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRRQYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FR +++EA R +GDTS NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDVREKQFRKVYEEAARRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG N+ SYRCK GDVIEV++KSKQL SVLE+ LAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGVRTNVQSYRCKPGDVIEVREKSKQLTSVLESVGLAERDVPDYIEVDHNKMVATYQ 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYPV M+PNLVVEFYSR Sbjct: 181 RVPA-LHDVPYPVQMEPNLVVEFYSR 205 >gi|149202433|ref|ZP_01879406.1| 30S ribosomal protein S4 [Roseovarius sp. TM1035] gi|149144531|gb|EDM32562.1| 30S ribosomal protein S4 [Roseovarius sp. TM1035] Length = 206 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 144/204 (70%), Positives = 169/204 (82%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKAKISDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAERLKGDTGENLIGLLERRLDAVVYRAKFVVTMFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQ+ +LEA QLAERDVP+YI +H M ATFV Sbjct: 121 VTVNGQRVNIPSYRVKEGDVIEVRDRSKQMTVLLEAVQLAERDVPDYIEADHSKMKATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+EFY Sbjct: 181 RQPG-LSDVPYPVMMEPNLVIEFY 203 >gi|315500061|ref|YP_004088864.1| ribosomal protein s4 [Asticcacaulis excentricus CB 48] gi|315418073|gb|ADU14713.1| ribosomal protein S4 [Asticcacaulis excentricus CB 48] Length = 205 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 141/205 (68%), Positives = 172/205 (83%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DR +GENLWGRPKSPVN RSYGPG HGQRRKSK S FGLQLRAKQK+K Sbjct: 1 MSKRHSAKYKLDRAMGENLWGRPKSPVNKRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+F I++EADR +G+TS NLI+ LESRLD IVYR KFVPT++AARQFVNH H Sbjct: 61 YYGNITEKQFSKIYEEADRRKGNTSENLIALLESRLDAIVYRCKFVPTVWAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR K GDVIEV+++S+ +A VLEA Q ERDVP+YI ++ M AT++ Sbjct: 121 VLVNGKKVNIASYRVKVGDVIEVRERSRNMALVLEALQSPERDVPDYIELDAKAMKATYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R+P L +VPYPV M+PNL+VE+YS Sbjct: 181 RLPE-LSEVPYPVKMEPNLIVEYYS 204 >gi|197104460|ref|YP_002129837.1| ribosomal protein S4 [Phenylobacterium zucineum HLK1] gi|226699100|sp|B4RHE8|RS4_PHEZH RecName: Full=30S ribosomal protein S4 gi|196477880|gb|ACG77408.1| ribosomal protein S4 [Phenylobacterium zucineum HLK1] Length = 205 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DRR+GEN+WGRPKSPVN+R+YGPG HGQRRKSK S FGLQLRAKQK+K Sbjct: 1 MSKRHSAKYKLDRRMGENIWGRPKSPVNSRAYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+F I+ EA R +G+TS NLI+ LESRLD +VYRAKFVPT FAARQFVNH H Sbjct: 61 YYGNITEKQFVRIYTEAARRKGNTSENLIALLESRLDAVVYRAKFVPTPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYR K GDV+ V+++S+ +A VLEA Q +ERD P+YI+++ M ATFV Sbjct: 121 VLVNGKRVNIPSYRVKPGDVVSVRERSRNMALVLEALQSSERDTPDYITLDAKGMSATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P + VPYPV M+PNLVVEFY Sbjct: 181 RAPELAE-VPYPVKMEPNLVVEFY 203 >gi|49474224|ref|YP_032266.1| 30S ribosomal protein S4 [Bartonella quintana str. Toulouse] gi|61215536|sp|Q6FZU4|RS4_BARQU RecName: Full=30S ribosomal protein S4 gi|49239728|emb|CAF26110.1| 30s ribosomal protein s4 [Bartonella quintana str. Toulouse] Length = 205 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 149/206 (72%), Positives = 172/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R RGDT NLI LESRLD ++YRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAVIYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLE+ QLAERDVPEYI +H+ M ATFV Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPEYIEADHNQMKATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205 >gi|260576499|ref|ZP_05844489.1| ribosomal protein S4 [Rhodobacter sp. SW2] gi|259021382|gb|EEW24688.1| ribosomal protein S4 [Rhodobacter sp. SW2] Length = 206 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 139/206 (67%), Positives = 164/206 (79%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+KHKIDRR+GEN+WGR KSP+N R YGPG HGQRRK+K S FG QLRAKQK+K Sbjct: 1 MTKRTSAKHKIDRRMGENIWGRAKSPLNKREYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF EA+R +GDT L+ LE RLD + YRAK V TIFAARQFVNH H Sbjct: 61 YYGDLTEKQFRKIFAEAERVKGDTGEMLVGLLERRLDAVCYRAKLVATIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNI SYR KEGD+IEV+QKSKQLA +LEASQL ERD+P+Y+ V+ + FV Sbjct: 121 VTVNGVRVNIASYRVKEGDIIEVRQKSKQLALILEASQLTERDIPDYLEVDQSKLTVKFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVEFY++ Sbjct: 181 RTPG-LGDVPYPVQMEPNLVVEFYAK 205 >gi|15889161|ref|NP_354842.1| 30S ribosomal protein S4 [Agrobacterium tumefaciens str. C58] gi|26399422|sp|Q8UEA0|RS4_AGRT5 RecName: Full=30S ribosomal protein S4 gi|15156975|gb|AAK87627.1| 30S ribosomal protein S4 [Agrobacterium tumefaciens str. C58] Length = 205 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 155/206 (75%), Positives = 179/206 (86%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG++ EK+FR+ F EA+R +GDTS NLIS LESRLD IVYRAKFVPT+FA+RQF+NH H Sbjct: 61 YYGELREKQFRATFDEANRRKGDTSENLISLLESRLDAIVYRAKFVPTVFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNIGSYRCK GDVIEV+QKSKQL +VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVRQKSKQLVTVLEAVQLAERDVPDYIEVDHNKMVATYA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+PS L DVPYPV+M+P+LVVEFYSR Sbjct: 181 RVPS-LSDVPYPVVMEPHLVVEFYSR 205 >gi|83311227|ref|YP_421491.1| 30S ribosomal protein S4 [Magnetospirillum magneticum AMB-1] gi|123542029|sp|Q2W5E3|RS4_MAGMM RecName: Full=30S ribosomal protein S4 gi|82946068|dbj|BAE50932.1| Ribosomal protein S4 and related protein [Magnetospirillum magneticum AMB-1] Length = 205 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 136/207 (65%), Positives = 157/207 (75%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT-RSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 MSKR +K+KI+RR+G NLWGR KSP+N + PG HGQRRK KPS FG QL AKQK+K Sbjct: 1 MSKRIEAKYKINRRLGANLWGRSKSPLNRGKENPPGQHGQRRK-KPSDFGTQLMAKQKLK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG+ISEK+FR ++ EA R RGDTS NLI LE RLD +VYR KF PT FAARQ VNH Sbjct: 60 GYYGNISEKQFRRLYDEAVRRRGDTSENLIGLLECRLDAVVYRLKFAPTPFAARQLVNHC 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LVNG+ VNI SYR EGDVI VK KSK +A +LEA+Q ERDVP+Y+ V+H M F Sbjct: 120 HILVNGKRVNIPSYRVNEGDVISVKTKSKDMALILEAAQSGERDVPDYMEVDHKEMKGKF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VRIP L DVPY V M+PNLVVEFYSR Sbjct: 180 VRIP-KLGDVPYAVQMEPNLVVEFYSR 205 >gi|110633623|ref|YP_673831.1| 30S ribosomal protein S4 [Mesorhizobium sp. BNC1] gi|123353737|sp|Q11IV9|RS4_MESSB RecName: Full=30S ribosomal protein S4 gi|110284607|gb|ABG62666.1| SSU ribosomal protein S4P [Chelativorans sp. BNC1] Length = 205 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 146/206 (70%), Positives = 173/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRQSAKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGQQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+SEK+FR I+ EA+R +G+T+ NLI LESRLD IV+RAKFVPT FAARQFVNH H Sbjct: 61 YYGDLSEKQFRRIYDEANRRKGETTENLIGLLESRLDAIVFRAKFVPTPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYRCK GDVIEV++KSKQL VLE+ LAERDVP+YI V+H+ M A +V Sbjct: 121 VKVNGRRVNIPSYRCKPGDVIEVREKSKQLTVVLESVALAERDVPDYIEVDHNKMTAKYV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPY V M+PNLV+E+YSR Sbjct: 181 RMPA-LADVPYAVHMEPNLVIEYYSR 205 >gi|319898918|ref|YP_004159011.1| 30S ribosomal protein S4 [Bartonella clarridgeiae 73] gi|319402882|emb|CBI76433.1| 30S ribosomal protein S4 [Bartonella clarridgeiae 73] Length = 205 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 154/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRESTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R RGDTS NLI LESRLD IVYRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRRGDTSENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLE+ QLAERDVPEYI V+H+ M ATF+ Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESIQLAERDVPEYIDVDHNKMKATFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FTDVPYAVHMEPNLVVEFYSR 205 >gi|114569567|ref|YP_756247.1| 30S ribosomal protein S4 [Maricaulis maris MCS10] gi|122316382|sp|Q0AQX8|RS4_MARMM RecName: Full=30S ribosomal protein S4 gi|114340029|gb|ABI65309.1| SSU ribosomal protein S4P [Maricaulis maris MCS10] Length = 205 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 138/205 (67%), Positives = 164/205 (80%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S K+KIDRR+GENLWGRPKSPVN+RSYGPG HGQRRK+K S FGLQL AKQK+K Sbjct: 1 MSKRHSQKYKIDRRMGENLWGRPKSPVNSRSYGPGQHGQRRKTKMSDFGLQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+FR + EA R +G+T+ LI LESRLD IVYR KFVPT+FA+RQFVNH H Sbjct: 61 YYGNITEKQFRRTYDEASRRKGNTAELLIGLLESRLDAIVYRCKFVPTVFASRQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNI SYRCK GDVIEV+++S+ +A VLEA ERD+PEYI ++ M ATFV Sbjct: 121 VKVNGIKVNIPSYRCKPGDVIEVRERSRSMALVLEALDSPERDLPEYIDLDAKAMKATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R+P +VPY V M+PNLV+EFYS Sbjct: 181 RMPE-FSEVPYAVQMEPNLVIEFYS 204 >gi|159045488|ref|YP_001534282.1| 30S ribosomal protein S4 [Dinoroseobacter shibae DFL 12] gi|189045378|sp|A8LK98|RS4_DINSH RecName: Full=30S ribosomal protein S4 gi|157913248|gb|ABV94681.1| 30S ribosomal protein S4 [Dinoroseobacter shibae DFL 12] Length = 206 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 144/204 (70%), Positives = 173/204 (84%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKQKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA+R +GDT NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG VNI SYR KEGDVIEV++KS+Q+A++LEA+QL ERDVP+Y+ +H+ M ATFV Sbjct: 121 VLVNGERVNIPSYRVKEGDVIEVREKSRQMAALLEATQLPERDVPDYVDADHNKMKATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+E+Y Sbjct: 181 RTPG-LADVPYPVMMEPNLVIEYY 203 >gi|319405659|emb|CBI79282.1| 30S ribosomal protein S4 [Bartonella sp. AR 15-3] Length = 205 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 153/206 (74%), Positives = 175/206 (84%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRE++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRETTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R RGDT NLI LESRLD IVYRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLEA QLAERDVPEYI+V+H+ M+ATF+ Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLEAVQLAERDVPEYINVDHNKMIATFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FADVPYAVHMEPNLVVEFYSR 205 >gi|258542135|ref|YP_003187568.1| 30S ribosomal protein S4 [Acetobacter pasteurianus IFO 3283-01] gi|256633213|dbj|BAH99188.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-01] gi|256636272|dbj|BAI02241.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-03] gi|256639325|dbj|BAI05287.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-07] gi|256642381|dbj|BAI08336.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-22] gi|256645436|dbj|BAI11384.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-26] gi|256648489|dbj|BAI14430.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-32] gi|256651542|dbj|BAI17476.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654533|dbj|BAI20460.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-12] Length = 205 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 134/206 (65%), Positives = 165/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K Sbjct: 1 MSKRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKGKPSDFSVQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+FR ++EA R +GDTS NLI+ LE RLD +VYR KF T FA+RQF++H H Sbjct: 61 YYGNITEKQFRRYYQEAVRRKGDTSENLINLLERRLDAVVYRMKFAITPFASRQFISHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ +NI SY K+GDVIEV++KSKQLA VL+A+Q +ERDVPEY+ V+H M T++ Sbjct: 121 ILVNGKKMNIPSYLVKDGDVIEVREKSKQLAIVLDAAQSSERDVPEYMEVDHRQMKGTYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVE+YSR Sbjct: 181 RGPQ-LSDVPYPVQMEPNLVVEYYSR 205 >gi|39934659|ref|NP_946935.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris CGA009] gi|192290175|ref|YP_001990780.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris TIE-1] gi|61215592|sp|Q6N9G0|RS4_RHOPA RecName: Full=30S ribosomal protein S4; AltName: Full=RRP-S4 gi|226699113|sp|B3Q7H1|RS4_RHOPT RecName: Full=30S ribosomal protein S4 gi|39648509|emb|CAE27030.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris CGA009] gi|192283924|gb|ACF00305.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1] Length = 205 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 137/206 (66%), Positives = 168/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRAEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +I+ EA R +GD+ NLI LE RLD +VYRAKFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDAVVYRAKFVSTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY+ + GDVIEVK+ SKQLA VLEASQLAERDVP+YI V+H+ M A F Sbjct: 121 IKVNGKRVNIPSYKVRVGDVIEVKEASKQLAFVLEASQLAERDVPDYIEVDHNKMTAKFA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205 >gi|323137934|ref|ZP_08073009.1| ribosomal protein S4 [Methylocystis sp. ATCC 49242] gi|322396937|gb|EFX99463.1| ribosomal protein S4 [Methylocystis sp. ATCC 49242] Length = 205 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 133/206 (64%), Positives = 160/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+K+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S +G QL+AKQK+K Sbjct: 1 MTKRAEAKYKLDRRLGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGTQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR + EA R +GD+ NLI LE RLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGNISEKQFRKYYAEAIRMKGDSGDNLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY K GDVIEVK+ SKQ +VLE+ LAERD PEY V+H M A Sbjct: 121 IRVNGRRVNIPSYLVKVGDVIEVKEASKQAVTVLESVALAERDTPEYYDVDHSKMTAKLT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + VPYPV M+PNLV+EFYSR Sbjct: 181 RVPHATE-VPYPVQMEPNLVIEFYSR 205 >gi|16126750|ref|NP_421314.1| 30S ribosomal protein S4 [Caulobacter crescentus CB15] gi|221235532|ref|YP_002517969.1| 30S ribosomal protein S4 [Caulobacter crescentus NA1000] gi|26399478|sp|Q9A5D9|RS4_CAUCR RecName: Full=30S ribosomal protein S4 gi|254764577|sp|B8H053|RS4_CAUCN RecName: Full=30S ribosomal protein S4 gi|13424068|gb|AAK24482.1| ribosomal protein S4 [Caulobacter crescentus CB15] gi|220964705|gb|ACL96061.1| SSU ribosomal protein S4P [Caulobacter crescentus NA1000] Length = 205 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 143/204 (70%), Positives = 170/204 (83%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+KIDRR+GENLWGRPKSPVN+RSYGPG HGQRRKSK S FGLQLRAKQK+K Sbjct: 1 MSKRHSAKYKIDRRMGENLWGRPKSPVNSRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+++EK+F ++EA R +G+TS NLI+ LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGNLTEKQFSRTYEEAARRKGNTSENLIALLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYRCK GDVI+V++KS+ +A VLEA ERD EY+SV+ ++ ATFV Sbjct: 121 VTVNGKRVNIPSYRCKAGDVIQVREKSRNMALVLEAVASNERDFAEYVSVDAKSLSATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L +VPYPV M+PNLVVEFY Sbjct: 181 RAPE-LSEVPYPVKMEPNLVVEFY 203 >gi|114327192|ref|YP_744349.1| 30S ribosomal protein S4 [Granulibacter bethesdensis CGDNIH1] gi|114315366|gb|ABI61426.1| SSU ribosomal protein S4P [Granulibacter bethesdensis CGDNIH1] Length = 231 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR SK KI+RR+G NLWGR KSP+N R Y PG HGQRRK KPS FG+QL AKQK+K Sbjct: 27 MTKRAESKFKINRRLGVNLWGRAKSPLNKRDYAPGQHGQRRKGKPSDFGIQLMAKQKLKG 86 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR ++EA R +GDTS NLI LE RLD ++YR KF T FAARQFVNH H Sbjct: 87 YYGNISEKQFRKYYEEAVRRKGDTSENLIELLERRLDAVIYRMKFALTPFAARQFVNHGH 146 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SY K GDV+EV++KSKQLA VL+A+Q ERDVPEY+ V+H M T+ Sbjct: 147 VLVNGKRVNIPSYLVKVGDVVEVREKSKQLAMVLDATQSGERDVPEYLHVDHRLMKGTYA 206 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLV+E+YSR Sbjct: 207 RYP-KLSDVPYPVQMEPNLVIEYYSR 231 >gi|296115002|ref|ZP_06833646.1| 30S ribosomal protein S4 [Gluconacetobacter hansenii ATCC 23769] gi|295978464|gb|EFG85198.1| 30S ribosomal protein S4 [Gluconacetobacter hansenii ATCC 23769] Length = 205 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 134/206 (65%), Positives = 159/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K Sbjct: 1 MSKRLESKYKINRRLGVNLWGRAKSPVNKREYGPGQHGQRRKQKPSDFSIQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I EK+FR + EA R +GDTS NLI LE RLD +VYR KF T FAARQF++H H Sbjct: 61 YYGNIGEKQFRKYYDEAVRRKGDTSENLIDLLERRLDAVVYRMKFAITPFAARQFISHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY ++GDVIEV++KSKQLA VL+A+Q ER+VPEY+ V+H M TF Sbjct: 121 ITVNGRKVNIPSYLVRDGDVIEVREKSKQLAIVLDAAQSGEREVPEYMEVDHRQMKGTFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + L DVPYPV M+PNLV+EFYSR Sbjct: 181 RT-AKLSDVPYPVQMEPNLVIEFYSR 205 >gi|83949926|ref|ZP_00958659.1| 30S ribosomal protein S4 [Roseovarius nubinhibens ISM] gi|83837825|gb|EAP77121.1| 30S ribosomal protein S4 [Roseovarius nubinhibens ISM] Length = 206 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 143/204 (70%), Positives = 169/204 (82%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+K+KIDRR+GEN+WGRPKSPVN R PG HG RRK+K S FGLQLRAKQK+K Sbjct: 1 MTKRTSAKYKIDRRMGENIWGRPKSPVNRRENAPGQHGARRKAKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR IF+EA+R +GDT NLI LE RLD +VYRAKFV T+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIFREAERVKGDTGENLIGLLERRLDAVVYRAKFVATMFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV+ +SKQ+A +LEA+QLAERDVP+YI +H M ATFV Sbjct: 121 VKVNGQRVNIPSYRVKEGDVIEVRDRSKQIAVLLEATQLAERDVPDYIDADHSKMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L DVPYPV+M+PNLV+EFY Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEFY 203 >gi|319408557|emb|CBI82210.1| 30S ribosomal protein S4 [Bartonella schoenbuchensis R1] Length = 205 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 153/206 (74%), Positives = 172/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRESTKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR I++EA R RGDTS NLI LESRLD IVYRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKIYEEAVRRRGDTSENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIEV++KSKQL VLE+ QLAERDVPEYI +H M ATF Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESIQLAERDVPEYIEADHSKMKATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FSDVPYAVHMEPNLVVEFYSR 205 >gi|114771201|ref|ZP_01448621.1| 30S ribosomal protein S4 [alpha proteobacterium HTCC2255] gi|114548126|gb|EAU51013.1| 30S ribosomal protein S4 [alpha proteobacterium HTCC2255] Length = 206 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 139/206 (67%), Positives = 167/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++KHK+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRTAAKHKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKQKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR I+ EA R GDT NL+ LE RLD +VYR+KFVPT+FAARQFVNH H Sbjct: 61 YYGDLTEKQFRRIYGEAVRVNGDTGENLVGLLERRLDAVVYRSKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR KEGDVIEV++KS+Q+A V+EA AERD EYI+V+ M A FV Sbjct: 121 VTVNGKKVNIPSYRVKEGDVIEVREKSRQMALVIEALASAERDFAEYINVDASKMKAEFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPVIM+PNLVVE+Y++ Sbjct: 181 RTPV-LADVPYPVIMEPNLVVEYYAK 205 >gi|49475604|ref|YP_033645.1| 30S ribosomal protein S4 [Bartonella henselae str. Houston-1] gi|61215542|sp|Q6G5E2|RS4_BARHE RecName: Full=30S ribosomal protein S4 gi|49238411|emb|CAF27638.1| 30S ribosomal protein s4 [Bartonella henselae str. Houston-1] Length = 205 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 146/206 (70%), Positives = 170/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R RGDT NLI LESRLD ++YRAKFVPTIFA+RQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAVIYRAKFVPTIFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR NI SYRCK GDVIE+++KSKQL VLE+ QL ERDVPEYI +H+ M ATF Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEIREKSKQLVLVLESVQLVERDVPEYIEADHNQMKATFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY V M+PNLVVEFYSR Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205 >gi|295688620|ref|YP_003592313.1| 30S ribosomal protein S4 [Caulobacter segnis ATCC 21756] gi|295430523|gb|ADG09695.1| ribosomal protein S4 [Caulobacter segnis ATCC 21756] Length = 205 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 144/204 (70%), Positives = 167/204 (81%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+KIDRR+GENLWGRPKSPVN+RSYGPG HGQRRKSK S FGLQLRAKQK+K Sbjct: 1 MSKRHSAKYKIDRRMGENLWGRPKSPVNSRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+++EK+F ++EA R +G+TS NLI LESRLD IVYRAKFVPT FAARQFVNH H Sbjct: 61 YYGNLTEKQFSRTYEEAARRKGNTSENLIGLLESRLDAIVYRAKFVPTPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SYRCK GDVI V++KS+ +A VLE+ ERD EY+SV +M ATFV Sbjct: 121 VLVNGKRVNIPSYRCKPGDVISVREKSRNMALVLESLASNERDFCEYVSVEAKSMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R P L +VPYPV M+PNLVVEFY Sbjct: 181 RAPE-LSEVPYPVKMEPNLVVEFY 203 >gi|316935241|ref|YP_004110223.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris DX-1] gi|315602955|gb|ADU45490.1| ribosomal protein S4 [Rhodopseudomonas palustris DX-1] Length = 205 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 136/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRAEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +I+ EA R +GD+ NLI LE RLD +VYRAKFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDAVVYRAKFVATMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY+ + GDVIEVK+ SKQLA VLEASQL ERDVP+YI V+H+ M A F Sbjct: 121 IRVNGKRVNIPSYKLRVGDVIEVKEASKQLAFVLEASQLGERDVPDYIEVDHNKMTAKFA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205 >gi|167647476|ref|YP_001685139.1| 30S ribosomal protein S4 [Caulobacter sp. K31] gi|189045368|sp|B0T660|RS4_CAUSK RecName: Full=30S ribosomal protein S4 gi|167349906|gb|ABZ72641.1| RNA-binding S4 domain protein [Caulobacter sp. K31] Length = 205 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 138/204 (67%), Positives = 167/204 (81%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+KIDRR+GENLWGRPKSPVN RSYGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MSKRHSAKYKIDRRMGENLWGRPKSPVNQRSYGPGQHGQRRKQKVSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+++EK+F ++EA R +G+T+ NL+ LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGNLTEKQFSRTYEEAARRKGNTAENLVGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYRCK GDVI V++KS+ +A VLEA +ERD EYI+V+ + A+F+ Sbjct: 121 VTVNGKRVNIASYRCKIGDVIAVREKSRNMALVLEAVASSERDFCEYITVDAKGLEASFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R+P L +VPYPV M+PNLVVEFY Sbjct: 181 RVPE-LSEVPYPVKMEPNLVVEFY 203 >gi|254292960|ref|YP_003058983.1| 30S ribosomal protein S4 [Hirschia baltica ATCC 49814] gi|254041491|gb|ACT58286.1| ribosomal protein S4 [Hirschia baltica ATCC 49814] Length = 205 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 128/205 (62%), Positives = 156/205 (76%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+R S+K+K+DRR+GEN+WGR KSP+N R PG HG RK K S FGLQL AKQK+K Sbjct: 1 MSRRSSAKYKLDRRVGENVWGRAKSPINKRQSRPGQHGAARKGKLSDFGLQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGD++EK+FR + EA R +G+T+ NLI LESRLD +VYRAKFVPTIFAARQFVNH H Sbjct: 61 HYGDVTEKQFRRTYDEAARRKGNTAENLIGLLESRLDALVYRAKFVPTIFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG N+ SYR + GDV++VK KS+ +A VLEA AERD+P+YI V M ATFV Sbjct: 121 VTVNGVKANVPSYRLRPGDVVQVKDKSRSMALVLEALGSAERDIPDYIEVEPKAMTATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R+P L DVPY M+PNLVVE+YS Sbjct: 181 RLPE-LADVPYACRMEPNLVVEYYS 204 >gi|162147980|ref|YP_001602441.1| 30S ribosomal protein S4 [Gluconacetobacter diazotrophicus PAl 5] gi|209542598|ref|YP_002274827.1| 30S ribosomal protein S4 [Gluconacetobacter diazotrophicus PAl 5] gi|189045383|sp|A9HL98|RS4_GLUDA RecName: Full=30S ribosomal protein S4 gi|161786557|emb|CAP56139.1| 30S ribosomal protein S4 [Gluconacetobacter diazotrophicus PAl 5] gi|209530275|gb|ACI50212.1| RNA-binding S4 domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 205 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 158/206 (76%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K Sbjct: 1 MSKRLESKYKINRRLGVNLWGRAKSPVNKREYGPGQHGQRRKQKPSDFSVQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR + EA R +GDTS NLI LE RLD +VYR KF T FAARQFV+H H Sbjct: 61 YYGNISEKQFRKYYDEAVRRKGDTSENLIDLLERRLDAVVYRLKFAMTPFAARQFVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY ++ DVIEV++KSK LA VL+A+Q ERDVPEY+ V+H M F+ Sbjct: 121 ITVNGRKVNIPSYIVRDEDVIEVREKSKHLAIVLDAAQSGERDVPEYMEVDHRQMKGRFL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLV+EFYSR Sbjct: 181 RAP-KLSDVPYPVQMEPNLVIEFYSR 205 >gi|188584461|ref|YP_001927906.1| 30S ribosomal protein S4 [Methylobacterium populi BJ001] gi|226699088|sp|B1ZAP8|RS4_METPB RecName: Full=30S ribosomal protein S4 gi|179347959|gb|ACB83371.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001] Length = 205 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 139/206 (67%), Positives = 162/206 (78%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRVQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+FR + EA R RGD+ NLI LE RLD +VYR+KFV T FAARQFVNH H Sbjct: 61 YYGNITEKQFRRYYAEAIRLRGDSGENLIGLLERRLDAVVYRSKFVATPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY+ K GDVIEVK+ S+QL V+ ASQLAERDVP+YI V+H M A Sbjct: 121 IKVNGRRVNIPSYQVKAGDVIEVKEASRQLEIVVVASQLAERDVPDYIEVDHQKMSARVT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L +VPYPV M+PNLV+EFYSR Sbjct: 181 RIPG-LSEVPYPVQMEPNLVIEFYSR 205 >gi|152060950|sp|Q0BUS6|RS4_GRABC RecName: Full=30S ribosomal protein S4 Length = 205 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR SK KI+RR+G NLWGR KSP+N R Y PG HGQRRK KPS FG+QL AKQK+K Sbjct: 1 MTKRAESKFKINRRLGVNLWGRAKSPLNKRDYAPGQHGQRRKGKPSDFGIQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR ++EA R +GDTS NLI LE RLD ++YR KF T FAARQFVNH H Sbjct: 61 YYGNISEKQFRKYYEEAVRRKGDTSENLIELLERRLDAVIYRMKFALTPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ VNI SY K GDV+EV++KSKQLA VL+A+Q ERDVPEY+ V+H M T+ Sbjct: 121 VLVNGKRVNIPSYLVKVGDVVEVREKSKQLAMVLDATQSGERDVPEYLHVDHRLMKGTYA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLV+E+YSR Sbjct: 181 RYP-KLSDVPYPVQMEPNLVIEYYSR 205 >gi|83858775|ref|ZP_00952297.1| 30S ribosomal protein S4 [Oceanicaulis alexandrii HTCC2633] gi|83853598|gb|EAP91450.1| 30S ribosomal protein S4 [Oceanicaulis alexandrii HTCC2633] Length = 205 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 137/205 (66%), Positives = 162/205 (79%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S K+KIDRR+GEN+WGR KSPVN RSYGPG HGQRR K S FGLQLRAKQK+K Sbjct: 1 MSKRHSQKYKIDRRMGENIWGRAKSPVNKRSYGPGQHGQRRAGKLSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+F+ I+ EA R +G+T+ NLI LESRLD IVYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGNITEKQFKRIYTEAQRLKGNTAENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY K GDV+EV++KS+ +A VLEA ERDVP+YI ++ M AT+ Sbjct: 121 VRVNGKRVNIASYMVKPGDVVEVREKSRSMALVLEALGSPERDVPDYIDLDPKAMKATYT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R P +VPYPV M+PNLVVEFYS Sbjct: 181 RKPE-FNEVPYPVKMEPNLVVEFYS 204 >gi|256113362|ref|ZP_05454220.1| 30S ribosomal protein S4 [Brucella melitensis bv. 3 str. Ether] gi|265994768|ref|ZP_06107325.1| SSU ribosomal protein S4P [Brucella melitensis bv. 3 str. Ether] gi|262765881|gb|EEZ11670.1| SSU ribosomal protein S4P [Brucella melitensis bv. 3 str. Ether] Length = 201 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 148/202 (73%), Positives = 170/202 (84%), Gaps = 1/202 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YGDISEK+FR ++EA R +GDT NLI LESRLD +VYRAKFVPTIFAARQF+NH H Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYK 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVE 202 R+P L DVPY V M+PNLVVE Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVE 201 >gi|154253024|ref|YP_001413848.1| 30S ribosomal protein S4 [Parvibaculum lavamentivorans DS-1] gi|171769617|sp|A7HWA8|RS4_PARL1 RecName: Full=30S ribosomal protein S4 gi|154156974|gb|ABS64191.1| RNA-binding S4 domain protein [Parvibaculum lavamentivorans DS-1] Length = 206 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 146/206 (70%), Positives = 171/206 (83%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR+ SK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MTKRQESKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG+ISEK+FR I+KEA+R RGDTS LI LE RLD +VYRAKFV T FAARQFV H H Sbjct: 61 FYGNISEKQFRGIYKEANRLRGDTSEILIGLLERRLDAVVYRAKFVMTPFAARQFVGHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ VN+ SYR +EGDVIEV++KSKQLA VLEASQ AERD P+YI V+HD MVA FV Sbjct: 121 ILVNGKRVNVPSYRVREGDVIEVREKSKQLAIVLEASQSAERDTPDYIEVDHDKMVAKFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ DVPY M+PNLV+EFYSR Sbjct: 181 RIPA-FSDVPYAAHMEPNLVIEFYSR 205 >gi|91976243|ref|YP_568902.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris BisB5] gi|123735552|sp|Q13A88|RS4_RHOPS RecName: Full=30S ribosomal protein S4 gi|91682699|gb|ABE39001.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris BisB5] Length = 205 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 136/206 (66%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +I+ EA R +GD+ NLI LE RLDT+VYR+KFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDTVVYRSKFVSTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY+ + GDVIEVK+ SKQLA VLEA+QLAERDVP+YI V+H+ M A F Sbjct: 121 IKVNGKRVNISSYKVRVGDVIEVKEASKQLAIVLEANQLAERDVPDYIDVDHNKMTAKFG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205 >gi|315122617|ref|YP_004063106.1| 30S ribosomal protein S4 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496019|gb|ADR52618.1| 30S ribosomal protein S4 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 206 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 180/206 (87%), Positives = 192/206 (93%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSKHKIDRRI ENLWGRPKSPVN RSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK Sbjct: 1 MSKRESSKHKIDRRISENLWGRPKSPVNVRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD+ EK+FRSIFKEADR +GDTS NLISFLESRLDTIVYRAKFVPT+FAARQFVNHRH Sbjct: 61 YYGDVGEKQFRSIFKEADRCKGDTSQNLISFLESRLDTIVYRAKFVPTVFAARQFVNHRH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG SVNIGSYRCK GDVIEVK KSK+L SVL + QL ERDVPEYIS +H+NMVATFV Sbjct: 121 VLVNGFSVNIGSYRCKAGDVIEVKSKSKKLTSVLGSVQLPERDVPEYISADHENMVATFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +IP+SL +VPYPVIM+PNLVVEFYSR Sbjct: 181 KIPTSLSEVPYPVIMEPNLVVEFYSR 206 >gi|182678240|ref|YP_001832386.1| 30S ribosomal protein S4 [Beijerinckia indica subsp. indica ATCC 9039] gi|226697805|sp|B2IJM5|RS4_BEII9 RecName: Full=30S ribosomal protein S4 gi|182634123|gb|ACB94897.1| RNA-binding S4 domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 205 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGR KSPVN R YGPG HGQRRK K S FG QL+AKQK+K Sbjct: 1 MTKRAEAKYKIDRRMGQNIWGRSKSPVNRREYGPGQHGQRRKGKLSDFGTQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR + EA R +GD+ NLI LE RLD +VYRAKFVPT+FA+RQF+NH H Sbjct: 61 YYGNISEKQFRKYYAEAIRMKGDSGDNLIGLLERRLDAVVYRAKFVPTVFASRQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY+ + GDVIEVK+ S+QL VLEASQLAERDVPEY V+H M A Sbjct: 121 IKVNGRRVNIASYQVRVGDVIEVKEASRQLTLVLEASQLAERDVPEYYDVDHGKMSAKVT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP +VPYPVIM+PNLV+EFYSR Sbjct: 181 RIPL-PNEVPYPVIMEPNLVIEFYSR 205 >gi|209884598|ref|YP_002288455.1| ribosomal protein S4 [Oligotropha carboxidovorans OM5] gi|226699096|sp|B6JDU6|RS4_OLICO RecName: Full=30S ribosomal protein S4 gi|209872794|gb|ACI92590.1| ribosomal protein S4 [Oligotropha carboxidovorans OM5] Length = 205 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +++ EA R +GD+ NLI LE RLD IVYRAKFVPT+FAARQF+NH H Sbjct: 61 YYANISERQFYAVYVEATRLKGDSGENLIGLLERRLDAIVYRAKFVPTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY+ K GDVIEVK SKQLA VLEA+QLAERDVP+++ V+H A F Sbjct: 121 IKVNGKRVNIPSYKVKVGDVIEVKDASKQLALVLEANQLAERDVPDFLDVDHGKQTAKFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIPS L +VP+PV M+P+L++EFYSR Sbjct: 181 RIPS-LSEVPFPVQMEPHLIIEFYSR 205 >gi|163854133|ref|YP_001642176.1| 30S ribosomal protein S4 [Methylobacterium extorquens PA1] gi|218533078|ref|YP_002423894.1| 30S ribosomal protein S4 [Methylobacterium chloromethanicum CM4] gi|240141590|ref|YP_002966070.1| 30S ribosomal protein S4 [Methylobacterium extorquens AM1] gi|254564101|ref|YP_003071196.1| 30S ribosomal protein S4 [Methylobacterium extorquens DM4] gi|226699086|sp|A9W966|RS4_METEP RecName: Full=30S ribosomal protein S4 gi|254764596|sp|B7KVN1|RS4_METC4 RecName: Full=30S ribosomal protein S4 gi|163665738|gb|ABY33105.1| RNA-binding S4 domain protein [Methylobacterium extorquens PA1] gi|218525381|gb|ACK85966.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum CM4] gi|240011567|gb|ACS42793.1| 30S ribosomal protein S4 [Methylobacterium extorquens AM1] gi|254271379|emb|CAX27392.1| 30S ribosomal protein S4 [Methylobacterium extorquens DM4] Length = 205 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRVQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+FR + EA R RGD+ NLI LE RLD +VYR+KFV T FAARQFVNH H Sbjct: 61 YYGNITEKQFRRYYAEAIRLRGDSGENLIGLLERRLDAVVYRSKFVATPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY+ K GDVIEVK+ S+QL V+ ASQLAERDVP+YI V+H M A Sbjct: 121 IKVNGRRVNIPSYQVKAGDVIEVKEASRQLEIVVVASQLAERDVPDYIEVDHHKMTARVT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP + VPYPV M+PNLV+EFYSR Sbjct: 181 RIPGLTE-VPYPVQMEPNLVIEFYSR 205 >gi|86750809|ref|YP_487305.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris HaA2] gi|123407656|sp|Q2ITR6|RS4_RHOP2 RecName: Full=30S ribosomal protein S4 gi|86573837|gb|ABD08394.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris HaA2] Length = 205 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F SI+ EA R +GD+ NLI LE RLDT+VYRAKFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHSIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVSTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY+ + GD+IEVK+ SKQLA VLEASQLAERDVP+YI V+H+ M A F Sbjct: 121 IKVNGKRVNISSYKVRVGDLIEVKESSKQLAFVLEASQLAERDVPDYIEVDHNKMTAKFG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPA-LTDVPFAVQMEPHLIVEFYSR 205 >gi|299131719|ref|ZP_07024914.1| ribosomal protein S4 [Afipia sp. 1NLS2] gi|298591856|gb|EFI52056.1| ribosomal protein S4 [Afipia sp. 1NLS2] Length = 205 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 134/206 (65%), Positives = 167/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +++ EA R +GD+ NLI LE RLD IVYRAKFVPT+FAARQF+NH H Sbjct: 61 YYANISERQFYAVYVEATRLKGDSGENLIGLLERRLDAIVYRAKFVPTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY+ K GDVIEVK SKQLA+VLEA+QLAERDVP++I V+H A F Sbjct: 121 IKVNGKRVNIPSYKVKVGDVIEVKDASKQLATVLEANQLAERDVPDFIEVDHGKQTAKFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VP+PV M+P+L++EFYSR Sbjct: 181 RVPN-LSEVPFPVQMEPHLIIEFYSR 205 >gi|170740488|ref|YP_001769143.1| 30S ribosomal protein S4 [Methylobacterium sp. 4-46] gi|226699090|sp|B0UDI8|RS4_METS4 RecName: Full=30S ribosomal protein S4 gi|168194762|gb|ACA16709.1| RNA-binding S4 domain protein [Methylobacterium sp. 4-46] Length = 205 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRIQAKHKLDRRLGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +I+EK+FR + EA R RGD+ NL+ LE RLD +VYR+KFV T FAARQFVNH H Sbjct: 61 YYANITEKQFRRYYAEAIRLRGDSGENLVGLLERRLDAVVYRSKFVATPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY K GDVIEVK+ SKQL V+ ASQLAERDVP+YI +H M A F Sbjct: 121 IRVNGQRVNIPSYLVKPGDVIEVKESSKQLEIVVVASQLAERDVPDYIEADHGKMTARFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VPYPV M+PN V+EFYSR Sbjct: 181 RVPT-LSEVPYPVHMEPNQVIEFYSR 205 >gi|148259677|ref|YP_001233804.1| 30S ribosomal protein S4 [Acidiphilium cryptum JF-5] gi|326403353|ref|YP_004283434.1| 30S ribosomal protein S4 [Acidiphilium multivorum AIU301] gi|172047761|sp|A5FWA3|RS4_ACICJ RecName: Full=30S ribosomal protein S4 gi|146401358|gb|ABQ29885.1| SSU ribosomal protein S4P [Acidiphilium cryptum JF-5] gi|325050214|dbj|BAJ80552.1| 30S ribosomal protein S4 [Acidiphilium multivorum AIU301] Length = 204 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 140/206 (67%), Positives = 164/206 (79%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR SK+KI+RR+G NLWGRPKSP+N R YGPG HGQRRK KPS FG+QL AKQK++ Sbjct: 1 MTKRTESKYKINRRLGVNLWGRPKSPINKREYGPGQHGQRRK-KPSDFGVQLMAKQKLRG 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+F ++EA R RGDTS NLI LE RLD +VYR KF T FAARQFV+H H Sbjct: 60 YYGNISEKQFYKYYEEAVRRRGDTSENLIELLERRLDAVVYRMKFAITPFAARQFVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNGR VNI SY+ ++GDV+EV++KSKQLA VL++ Q AERDVPEYI V+H M TF Sbjct: 120 VLVNGRRVNISSYQVRDGDVVEVREKSKQLAMVLDSVQSAERDVPEYIEVDHRAMKGTFA 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLVVEFYSR Sbjct: 180 RAP-KLADVPYPVQMEPNLVVEFYSR 204 >gi|170748158|ref|YP_001754418.1| 30S ribosomal protein S4 [Methylobacterium radiotolerans JCM 2831] gi|226699089|sp|B1M7L0|RS4_METRJ RecName: Full=30S ribosomal protein S4 gi|170654680|gb|ACB23735.1| RNA-binding S4 domain protein [Methylobacterium radiotolerans JCM 2831] Length = 205 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 136/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRIQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+FR + EA R RGD+ NL+ LE RLD +VYRAKFV T FAARQFVNH H Sbjct: 61 YYGNITEKQFRRYYAEAIRLRGDSGENLVGLLERRLDAVVYRAKFVATPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNI SY+ K GD+IEVK+ S+QL V+ A+QL+ERDVP+YI +H M A Sbjct: 121 VKVNGVRVNIPSYQVKAGDLIEVKESSRQLEIVIVATQLSERDVPDYIEADHAKMTARVT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIPS L +VPYPV M+PNLV+EFYSR Sbjct: 181 RIPS-LSEVPYPVQMEPNLVIEFYSR 205 >gi|220920404|ref|YP_002495705.1| 30S ribosomal protein S4 [Methylobacterium nodulans ORS 2060] gi|254764597|sp|B8IB09|RS4_METNO RecName: Full=30S ribosomal protein S4 gi|219945010|gb|ACL55402.1| RNA-binding S4 domain protein [Methylobacterium nodulans ORS 2060] Length = 205 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 136/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRIQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +I+EK+FR + EA R RGD+ NLI LE RLD ++YRAKFV T FAARQFVNH H Sbjct: 61 YYANITEKQFRRYYAEAIRLRGDSGENLIGLLERRLDAVIYRAKFVATPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI S+ K GDVIEVK+ SKQL V+ ASQLAERDVP+YI V+H M A F Sbjct: 121 IKVNGQRVNIPSFLVKPGDVIEVKESSKQLEIVVVASQLAERDVPDYIEVDHGKMTARFT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VPYPV M+PN V+EFYSR Sbjct: 181 RVPT-LSEVPYPVHMEPNQVIEFYSR 205 >gi|209964302|ref|YP_002297217.1| 30S ribosomal protein S4 [Rhodospirillum centenum SW] gi|226699112|sp|B6ISG8|RS4_RHOCS RecName: Full=30S ribosomal protein S4 gi|209957768|gb|ACI98404.1| ribosomal protein S4 [Rhodospirillum centenum SW] Length = 204 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 128/206 (62%), Positives = 159/206 (77%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+ +K+KIDRR+G NLWGR KSPVN R YGPG HGQRRK KPS +G+QL AKQK+K Sbjct: 1 MSKRQEAKYKIDRRLGVNLWGRAKSPVNKREYGPGQHGQRRK-KPSDYGMQLMAKQKLKG 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I EK+FR +++EA R +GD+ NLI LE RLD +VYR KF T FA+RQ +NH H Sbjct: 60 YYGNIGEKQFRRLYQEAVRRKGDSGENLIQLLERRLDAVVYRMKFAATPFASRQLINHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR VNI SY K+GD IEV+ K+KQ A V+EA+ ERD+P+Y+SV+ + T+V Sbjct: 120 ILVNGRRVNIPSYTVKDGDSIEVRSKAKQFAFVMEAAASGERDIPDYLSVDSQALKGTYV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLV+EFYSR Sbjct: 180 RAPG-LADVPYPVQMEPNLVIEFYSR 204 >gi|313901705|ref|ZP_07835135.1| SSU ribosomal protein S4P [Thermaerobacter subterraneus DSM 13965] gi|313468023|gb|EFR63507.1| SSU ribosomal protein S4P [Thermaerobacter subterraneus DSM 13965] Length = 201 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 132/206 (64%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KH + RR+G L G PK P R Y PG HG R+ K S +G +L KQK++ Sbjct: 1 MARYTGPKHAMCRRVGRPLCGSPKCPALKRPYPPGQHGPGRRQKLSEYGRRLLEKQKLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR F+ A RS+G+T L+ LE+RLD +VYR F PTI+AARQ V H H Sbjct: 61 MYGVL-ERQFRRYFERAQRSKGNTGERLLQLLETRLDNLVYRMGFAPTIWAARQLVVHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR V+ SY+ + GDVI V++KS+++ + E+ + A+R PEY+SV + T + Sbjct: 120 IQVNGRKVDRPSYQVRPGDVIAVREKSRRIPLIQESLENAQR-APEYLSVEPERFQGTLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ + P+ ++ +L+VEFYSR Sbjct: 179 RVPARDE---IPIDIEESLIVEFYSR 201 >gi|87200259|ref|YP_497516.1| 30S ribosomal protein S4 [Novosphingobium aromaticivorans DSM 12444] gi|123488982|sp|Q2G641|RS4_NOVAD RecName: Full=30S ribosomal protein S4 gi|87135940|gb|ABD26682.1| SSU ribosomal protein S4P [Novosphingobium aromaticivorans DSM 12444] Length = 203 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 126/206 (61%), Positives = 162/206 (78%), Gaps = 3/206 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR++SK+KIDRR+GEN+WGRPKS VN RSYGPG HGQRRKSK S FG+QLRAKQK+K Sbjct: 1 MSKRKASKYKIDRRLGENIWGRPKSSVNRRSYGPGQHGQRRKSKVSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+ ++EA + +GDT NLI LE RLD +VYRAKF PTIF+ARQ V+H H Sbjct: 61 YYGDVTEKQFKRTYQEASKMKGDTGQNLIGLLEQRLDMVVYRAKFAPTIFSARQVVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S R + GDV+ + +K+K++A + EA L ER+VP+Y++ + D TF Sbjct: 121 IYVNGVKCNIASRRVRPGDVVSLGKKAKEMALIAEAQALPEREVPDYVAADGDK--VTFT 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VPYPV M+PNLVVEFYSR Sbjct: 179 RVPT-LDEVPYPVKMEPNLVVEFYSR 203 >gi|205374494|ref|ZP_03227290.1| 30S ribosomal protein S4 [Bacillus coahuilensis m4-4] Length = 200 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + +G N + LE RLD +VYR T ARQ VNH H Sbjct: 60 MYG-VNERQFRNLFDKAAKIQGKHGENFMVLLECRLDNVVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG V+I S+R + G VI V++KS+ L + EA ++ VPEY++ + D + TF Sbjct: 119 VLVNGSRVDIPSFRVQPGQVIGVREKSRNLDIIKEAIEV-NNFVPEYLTFDADKLEGTFN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|304391422|ref|ZP_07373364.1| ribosomal protein S4 [Ahrensia sp. R2A130] gi|303295651|gb|EFL90009.1| ribosomal protein S4 [Ahrensia sp. R2A130] Length = 205 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 140/206 (67%), Positives = 169/206 (82%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR++SK+K+DRR+GEN+WGRPKSPVN R YGPG HGQ RK K S FG+QLRAKQK+K Sbjct: 1 MSKRQASKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQGRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR IF +A+ +GDT NLI LE RLDTI+YRAKFVPT+FAARQFVNH H Sbjct: 61 YYGNISEKQFRKIFDQANAQKGDTGENLIGLLERRLDTIIYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG NI SYRCK GDVIE+++KSKQLA VLE+ LAERDVPEY++ +H M + V Sbjct: 121 LLVNGVRTNIPSYRCKPGDVIEIREKSKQLAIVLESVGLAERDVPEYVTADHSKMTCSLV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ DVP+PV+M+PNL VEFYSR Sbjct: 181 TVPA-FGDVPFPVLMEPNLTVEFYSR 205 >gi|288959195|ref|YP_003449536.1| small subunit ribosomal protein S4 [Azospirillum sp. B510] gi|288911503|dbj|BAI72992.1| small subunit ribosomal protein S4 [Azospirillum sp. B510] Length = 204 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 131/206 (63%), Positives = 157/206 (76%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+ SK+KIDRR+G NLWGR KSP+N R YGPG HGQRRK KPS +GLQL AKQK+K Sbjct: 1 MSKRQESKYKIDRRLGVNLWGRAKSPLNKREYGPGQHGQRRK-KPSDYGLQLMAKQKLKG 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I EK+FR I+ EA R +GDT NLI LE RLD +VYR KF PT FAARQ +NH H Sbjct: 60 YYGNIGEKQFRRIYAEAVRRKGDTGENLIGLLERRLDAVVYRMKFAPTPFAARQLINHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR +NI S R K+ D +EV+ KSKQ+A VLEA+ ERD+P+Y+ V+ + FV Sbjct: 120 ILVNGRRLNIASARIKDNDTVEVRAKSKQMALVLEAAASGERDIPDYLEVDSSALKGRFV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLV+EFYSR Sbjct: 180 RAPL-LADVPYPVQMEPNLVIEFYSR 204 >gi|319651867|ref|ZP_08005992.1| 30S ribosomal protein S4 [Bacillus sp. 2_A_57_CT2] gi|317396519|gb|EFV77232.1| 30S ribosomal protein S4 [Bacillus sp. 2_A_57_CT2] Length = 200 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-VNERQFRNLFDKAGKMPGKHGENFMILLESRLDNVVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR G I +++KS+ L V EA ++ VP+++S + D + TF Sbjct: 119 IMVDGSRVDIPSYRVAPGQTITLREKSRSLDIVKEAIEV-NNFVPDFVSFDADKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + +L+VEFYSR Sbjct: 178 RMPERSE---LPAEINESLIVEFYSR 200 >gi|296444481|ref|ZP_06886446.1| ribosomal protein S4 [Methylosinus trichosporium OB3b] gi|296258128|gb|EFH05190.1| ribosomal protein S4 [Methylosinus trichosporium OB3b] Length = 205 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 131/206 (63%), Positives = 159/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR SK+K+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QL+AKQK+K Sbjct: 1 MTKRAESKYKLDRRLGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR + EA R +GD+ NLI LE RLD +VYRAKFVPT+FAARQF+NH H Sbjct: 61 YYGNISEKQFRKYYAEAIRLKGDSGDNLIGLLERRLDAVVYRAKFVPTVFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SY K DV+EVK+ SKQ +VLE+ L ERDVP+Y V+H+ M A Sbjct: 121 IRVNGRRVNIPSYLVKLDDVVEVKESSKQAITVLESVALGERDVPDYYEVDHNKMTAKLN 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P +VPYPV M+PNLV+EFYSR Sbjct: 181 RVPL-PNEVPYPVQMEPNLVIEFYSR 205 >gi|90423114|ref|YP_531484.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris BisB18] gi|122476766|sp|Q218M1|RS4_RHOPB RecName: Full=30S ribosomal protein S4 gi|90105128|gb|ABD87165.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris BisB18] Length = 205 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 136/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F SI+ EA R +GD+ NLI LE RLDT+VYRAKFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHSIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVSTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY+ K GD++EVK+ SKQL VLEA+QLAERDVP++I V+H M A F+ Sbjct: 121 VKVNGKRVNIASYKVKVGDLVEVKESSKQLTFVLEANQLAERDVPDFIEVDHGKMTAKFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPH-LSDVPFAVQMEPHLIVEFYSR 205 >gi|329851321|ref|ZP_08266078.1| ribosomal protein S4 [Asticcacaulis biprosthecum C19] gi|328840167|gb|EGF89739.1| ribosomal protein S4 [Asticcacaulis biprosthecum C19] Length = 205 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 129/205 (62%), Positives = 164/205 (80%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DR +GENLWGRPKSPVN RSYGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRHSAKYKLDRVMGENLWGRPKSPVNKRSYGPGQHGQRRKQKISDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+F ++EA R +G+TS NLI+ LE+RLD +VYRAKFVPT++AARQFVNH H Sbjct: 61 YYGNITEKQFLRTYEEASRRKGNTSENLIALLETRLDALVYRAKFVPTVWAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SYR K DV+EV+++S+ +A VLEA Q ERDVP+YI ++ A + Sbjct: 121 VTVNGQRVNIPSYRVKPDDVVEVRERSRSMALVLEALQSPERDVPDYIELDAKGQKARLI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R+P + VPYPV M+P+L+VE+YS Sbjct: 181 RLPELAE-VPYPVKMEPHLIVEYYS 204 >gi|317122229|ref|YP_004102232.1| 30S ribosomal protein S4P [Thermaerobacter marianensis DSM 12885] gi|315592209|gb|ADU51505.1| SSU ribosomal protein S4P [Thermaerobacter marianensis DSM 12885] Length = 201 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 88/206 (42%), Positives = 131/206 (63%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KH + RR+G L G PK P R Y PG HG R+ K S +G +L KQK++ Sbjct: 1 MARYTGPKHAMCRRVGRPLCGSPKCPALKRPYPPGQHGPGRRQKLSEYGRRLLEKQKLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR F+ A RS+G+T L+ LE+RLD +VYR F P+I+AARQ V H H Sbjct: 61 MYGVL-ERQFRRYFERAQRSKGNTGERLLQLLETRLDNLVYRMGFAPSIWAARQLVVHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR V+ SY+ + GDVI V++KS+++ + E+ A+R P+Y+SV + T + Sbjct: 120 IQVNGRKVDRPSYQVRPGDVIAVREKSRRIPLIQESLANAQR-APDYLSVEPERFQGTLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+PS + P+ ++ +L+VEFYSR Sbjct: 179 RVPSRDE---IPIDIEESLIVEFYSR 201 >gi|212638314|ref|YP_002314834.1| 30S ribosomal protein S4 [Anoxybacillus flavithermus WK1] gi|212559794|gb|ACJ32849.1| Ribosomal protein S4 [Anoxybacillus flavithermus WK1] Length = 219 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +G+QL+ KQK++ Sbjct: 20 MARYTGPTWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRKKLSEYGMQLQEKQKLRH 78 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F+EA + G N + LESRLD +VYR F T ARQ VNH H Sbjct: 79 MYG-VNERQFRKTFEEAGKMAGKHGENFMILLESRLDNLVYRLGFARTRRQARQLVNHGH 137 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I SYR K G I V++KS+ L + EA ++ VP+Y++++ D + T+ Sbjct: 138 ILVDGSRVDIPSYRVKPGQTISVREKSRNLQIIKEALEV-NSFVPDYLTLDADKLEGTYT 196 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 197 RLPERSE---LPAEINEALIVEFYSR 219 >gi|75675508|ref|YP_317929.1| 30S ribosomal protein S4 [Nitrobacter winogradskyi Nb-255] gi|90101700|sp|Q3ST14|RS4_NITWN RecName: Full=30S ribosomal protein S4 gi|74420378|gb|ABA04577.1| SSU ribosomal protein S4P [Nitrobacter winogradskyi Nb-255] Length = 205 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 166/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISE++F +I+ EA R +GD+ NLI LE RLDT+VYRAKFVPTIFAARQF+NH H Sbjct: 61 YYGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTIFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SY+ K GD +EVK SKQLA VLEA+QLAERDVP++I +H+ A F+ Sbjct: 121 VKVNGRRVNIPSYKLKVGDTVEVKDASKQLALVLEANQLAERDVPDFIDADHNKQSAKFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPQ-LADVPFAVQMEPHLIVEFYSR 205 >gi|296532411|ref|ZP_06895138.1| 30S ribosomal protein S4 [Roseomonas cervicalis ATCC 49957] gi|296267254|gb|EFH13152.1| 30S ribosomal protein S4 [Roseomonas cervicalis ATCC 49957] Length = 205 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 130/206 (63%), Positives = 158/206 (76%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR SK+KI+RR+G NLWGR KSPV R YGPG HGQRRK KP+ FG+QL AKQK+K Sbjct: 1 MTKRAESKYKINRRLGVNLWGRAKSPVAKREYGPGQHGQRRKQKPTDFGVQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I EK+FR ++EA R +GDTS NLI LE RLD +VYR K T FAARQFVNH H Sbjct: 61 YYGNIGEKQFRKYYEEAVRRKGDTSENLIELLERRLDAVVYRLKLAVTPFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY ++ DVIEVK+KSKQL +VL+A+Q ER+VPEY+ ++H M F+ Sbjct: 121 ITVNGKRVNIPSYLVRDNDVIEVKEKSKQLVAVLDAAQSGEREVPEYLEIDHRQMKGRFL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L DVPYPV M+PNLV+EFYSR Sbjct: 181 RAP-KLSDVPYPVQMEPNLVIEFYSR 205 >gi|229543523|ref|ZP_04432583.1| ribosomal protein S4 [Bacillus coagulans 36D1] gi|229327943|gb|EEN93618.1| ribosomal protein S4 [Bacillus coagulans 36D1] Length = 200 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F + F +A + +G N + LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-LNERQFHNTFLKAGKMQGKHGENFMVLLESRLDNLVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SYR + G I V++KS+ L + EA + VP+Y+S + D + T+ Sbjct: 119 ILVDGKRVDIPSYRVEPGQTIGVREKSRNLDVIKEAIETTTF-VPDYLSFDADKLEGTYS 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + +L+VEFYSR Sbjct: 178 RLPERSE---LPAEINESLIVEFYSR 200 >gi|295399544|ref|ZP_06809526.1| ribosomal protein S4 [Geobacillus thermoglucosidasius C56-YS93] gi|312109901|ref|YP_003988217.1| ribosomal protein S4 [Geobacillus sp. Y4.1MC1] gi|294979010|gb|EFG54606.1| ribosomal protein S4 [Geobacillus thermoglucosidasius C56-YS93] gi|311215002|gb|ADP73606.1| ribosomal protein S4 [Geobacillus sp. Y4.1MC1] Length = 200 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F+EA + G N + LESRLD +VYR F T ARQ V H H Sbjct: 60 MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGFARTRRQARQLVTHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G VNI SYR K G I V++KS+ L + EA +L VP+Y++++ D + T+ Sbjct: 119 ILVDGNRVNIPSYRVKPGQTISVREKSRNLQVIKEALEL-NNFVPDYLTLDADKLEGTYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + +L+VEFYSR Sbjct: 178 RLPERSE---LPAEINESLIVEFYSR 200 >gi|294084244|ref|YP_003551002.1| 30S ribosomal protein S4:RNA-binding S4:30S ribosomal protein S4, bacterial and organelle form [Candidatus Puniceispirillum marinum IMCC1322] gi|292663817|gb|ADE38918.1| Ribosomal protein S4:RNA-binding S4:Ribosomal protein S4, bacterial and organelle form [Candidatus Puniceispirillum marinum IMCC1322] Length = 208 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 127/210 (60%), Positives = 159/210 (75%), Gaps = 6/210 (2%) Query: 1 MSK----RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K R S+KHKIDRR+G NLWGRPKSPVN R YGPG HGQRRK KP+ FG+QL AKQ Sbjct: 1 MAKSDHKRHSAKHKIDRRLGVNLWGRPKSPVNAREYGPGQHGQRRK-KPTDFGVQLMAKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K YYG+I EK+F+ ++ A R +GDT NLI LE RLD I+YR+K VPT+FAARQ + Sbjct: 60 KLKGYYGNIGEKQFKKYYQAAARGKGDTGQNLIGILECRLDAILYRSKMVPTVFAARQII 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 NH H+++NG+ NI S K GD I +K+K+K + +VL+A ERDVPEY+ VNHD Sbjct: 120 NHGHIMLNGKRCNIASVMLKPGDEIALKEKAKTIPAVLDAIASVERDVPEYVDVNHDKFT 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A F+RIP+ L +VPYPV M+PNLVVE+YSR Sbjct: 180 AKFIRIPT-LDEVPYPVQMEPNLVVEYYSR 208 >gi|239828057|ref|YP_002950681.1| 30S ribosomal protein S4 [Geobacillus sp. WCH70] gi|259495282|sp|C5D699|RS4_GEOSW RecName: Full=30S ribosomal protein S4 gi|239808350|gb|ACS25415.1| ribosomal protein S4 [Geobacillus sp. WCH70] Length = 200 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPTWKISRRLGISLSGTGKE-LQKRPYPPGQHGPSQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F+EA + G N + LESRLD +VYR F T ARQ V H H Sbjct: 60 MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGFARTRRQARQLVTHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G VNI SYR K G I V++KS+ L + EA +L VP+Y++++ + + T+ Sbjct: 119 ILVDGNRVNIPSYRVKPGQTISVREKSRNLQVIKEALEL-NNFVPDYLTLDAEKLEGTYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPSEINEALIVEFYSR 200 >gi|152112255|sp|Q07R54|RS4_RHOP5 RecName: Full=30S ribosomal protein S4 Length = 205 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +I+ EA R +GD+ NLI LE RLDT+VYRAKFV T+FAARQF+NH H Sbjct: 61 YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVATMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY+ K GD+IEVK+ SKQLA VLEASQL ERD P+Y+ V+H M A F+ Sbjct: 121 VKVNGKRVNISSYKVKVGDLIEVKESSKQLAFVLEASQLGERDTPDYVEVDHSKMTAKFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVP+ V M+P+L+VEFYSR Sbjct: 181 RVPH-LSDVPFAVQMEPHLIVEFYSR 205 >gi|121534659|ref|ZP_01666480.1| ribosomal protein S4 [Thermosinus carboxydivorans Nor1] gi|121306679|gb|EAX47600.1| ribosomal protein S4 [Thermosinus carboxydivorans Nor1] Length = 208 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + RR G L+ + K P + R Y PG HGQ RK Y GLQLR Sbjct: 1 MARYTGPVCRQCRREGLKLYLKGDKCYSDKCPFSRRGYAPGQHGQARKKLSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR+ F++ADR +G T NL+ LE RLD +VYR ARQ Sbjct: 60 KQKARRIYG-ILEGQFRNYFEKADRQKGITGENLLIMLERRLDNVVYRLGLAANRTQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173 V H H VNGR V+I S++ K GDVI+V++ SK E A LA + VP ++ ++ + Sbjct: 119 LVRHGHFTVNGRRVDIPSFQVKVGDVIQVRESSKDSPLFKEIAEGLAHKTVPAWLELSAN 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +M VR P+ + V +Q +L+VE YSR Sbjct: 179 DMSGKVVRYPTREE---IDVPIQEHLIVELYSR 208 >gi|217976302|ref|YP_002360449.1| 30S ribosomal protein S4 [Methylocella silvestris BL2] gi|254764599|sp|B8EL92|RS4_METSB RecName: Full=30S ribosomal protein S4 gi|217501678|gb|ACK49087.1| RNA-binding S4 domain protein [Methylocella silvestris BL2] Length = 205 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QL+AKQK+K Sbjct: 1 MTKRAEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+FR + EA R RGD+ NLI LE RLD ++YRAKFVPT+FAARQFVNH H Sbjct: 61 YYGNISEKQFRKYYAEAIRLRGDSGDNLIGLLERRLDAVIYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY K GDVIEVK+ S+++ VLEA QLAERDVP+Y V+H+ M A Sbjct: 121 VKVNGKRVNIASYLVKVGDVIEVKESSREILIVLEAKQLAERDVPDYYEVDHNKMTAKIT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP DVPYPV+M+PNLV+EFYSR Sbjct: 181 RIPL-PADVPYPVLMEPNLVIEFYSR 205 >gi|158319571|ref|YP_001512078.1| ribosomal protein S4 [Alkaliphilus oremlandii OhILAs] gi|172048249|sp|A8MLG8|RS4A_ALKOO RecName: Full=30S ribosomal protein S4 A gi|158139770|gb|ABW18082.1| ribosomal protein S4 [Alkaliphilus oremlandii OhILAs] Length = 207 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K ++ R+Y PG HGQ RK +Y GLQLR Sbjct: 1 MARYTEAVCRLCRREGMKLYLKGDRCYTDKCAISKRTYAPGQHGQSRKKLSNY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K++YG + E +FR F+ AD+ G T NL+ LE+RLD + YR F + ARQ Sbjct: 60 KQKAKRFYGVL-ESQFRKYFEIADKQAGITGENLLRLLETRLDNVAYRLGFGSSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H VNG+ V+I SY GD I V +KSK A ++ A+ + P +++V+ + Sbjct: 119 LVVHGHFTVNGKKVDIPSYLVSAGDTIAVAEKSKSSAKFKALAENAKGNTPNWLTVDVEK 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V +PS + + NL+VE YS+ Sbjct: 179 LEGKVVALPSR---EDIDLEIAENLIVELYSK 207 >gi|89100095|ref|ZP_01172964.1| 30S ribosomal protein S4 [Bacillus sp. NRRL B-14911] gi|89085185|gb|EAR64317.1| 30S ribosomal protein S4 [Bacillus sp. NRRL B-14911] Length = 200 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRRKISEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-VTERQFRNLFDKAGKMAGKHGENFMVLLESRLDNVVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR + G I +++KS+ L V EA ++ VP++++ + D + +F Sbjct: 119 IIVDGGRVDIPSYRVQPGQTITLREKSRGLDIVKEAIEV-NNFVPDFLTFDADKLEGSFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|300023627|ref|YP_003756238.1| ribosomal protein S4 [Hyphomicrobium denitrificans ATCC 51888] gi|299525448|gb|ADJ23917.1| ribosomal protein S4 [Hyphomicrobium denitrificans ATCC 51888] Length = 205 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 133/206 (64%), Positives = 161/206 (78%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +KHKIDRR+GEN+WGRPKSP+N R PG HG+RR K S FG QL+AKQK+K Sbjct: 1 MTKRIRAKHKIDRRLGENIWGRPKSPLNRRESRPGQHGERRSGKLSDFGQQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG ISE++FR+ + EA R +G TS LI LE RLD +VYRAKFVPT+FAARQFV+H H Sbjct: 61 YYGSISERQFRAAYDEASRLKGSTSELLIGLLERRLDALVYRAKFVPTVFAARQFVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V I SYR + GDVIEV +K+KQLA VLEA + AERDVP+Y++ +H+ M A Sbjct: 121 VTVNGKRVTIPSYRLRIGDVIEVTEKAKQLALVLEAIKSAERDVPDYVNADHNKMTAALT 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L DVPYPV M+PNLVVEFYSR Sbjct: 181 RIPA-LSDVPYPVQMEPNLVVEFYSR 205 >gi|138896341|ref|YP_001126794.1| 30S ribosomal protein S4 [Geobacillus thermodenitrificans NG80-2] gi|196249964|ref|ZP_03148659.1| ribosomal protein S4 [Geobacillus sp. G11MC16] gi|172044188|sp|A4IRU5|RS4_GEOTN RecName: Full=30S ribosomal protein S4 gi|134267854|gb|ABO68049.1| Ribosomal protein S4 (BS4) [Geobacillus thermodenitrificans NG80-2] gi|196210478|gb|EDY05242.1| ribosomal protein S4 [Geobacillus sp. G11MC16] Length = 200 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPTWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F EA + G N + LESRLD +VYR T ARQ V H H Sbjct: 60 MYG-VNERQFRKTFDEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G VNI SYR K G I V++KS+ L + EA ++ VP+Y++ + + + T+ Sbjct: 119 ILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEAIEV-NNFVPDYLTFDPEKLEGTYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|85715178|ref|ZP_01046162.1| Ribosomal protein S4 [Nitrobacter sp. Nb-311A] gi|85698093|gb|EAQ35966.1| Ribosomal protein S4 [Nitrobacter sp. Nb-311A] Length = 205 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 137/206 (66%), Positives = 166/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISE++F +I+ EA R +GD+ NLI LE RLDT+VYRAKFVPT+FAARQF+NH H Sbjct: 61 YYGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SY+ K GD +EVK SKQLA VLEA+QLAERDVP++I +H+ A F+ Sbjct: 121 VKVNGRRVNIPSYKLKVGDTVEVKDASKQLALVLEANQLAERDVPDFIDADHNKQSAKFI 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPQ-LADVPFAVQMEPHLIVEFYSR 205 >gi|262383848|ref|ZP_06076984.1| 30S ribosomal protein S4 [Bacteroides sp. 2_1_33B] gi|301312006|ref|ZP_07217928.1| ribosomal protein S4 [Bacteroides sp. 20_3] gi|262294746|gb|EEY82678.1| 30S ribosomal protein S4 [Bacteroides sp. 2_1_33B] gi|300830108|gb|EFK60756.1| ribosomal protein S4 [Bacteroides sp. 20_3] Length = 201 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A RS+G T L+ LE RLD +VYR PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNMVYRLGMAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V++KSK + + +A +I + +M + Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHSKYPWIEWDQSSMSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ L+VE YS+ Sbjct: 179 HLPERTD---IPENIKEQLIVELYSK 201 >gi|115523649|ref|YP_780560.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris BisA53] gi|115517596|gb|ABJ05580.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris BisA53] Length = 222 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 18 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 77 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +I+ EA R +GD+ NLI LE RLDT+VYRAKFV T+FAARQF+NH H Sbjct: 78 YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVATMFAARQFINHGH 137 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY+ K GD+IEVK+ SKQLA VLEASQL ERD P+Y+ V+H M A F+ Sbjct: 138 VKVNGKRVNISSYKVKVGDLIEVKESSKQLAFVLEASQLGERDTPDYVEVDHSKMTAKFI 197 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L DVP+ V M+P+L+VEFYSR Sbjct: 198 RVPH-LSDVPFAVQMEPHLIVEFYSR 222 >gi|51894183|ref|YP_076874.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863] gi|81691984|sp|Q67JX0|RS4A_SYMTH RecName: Full=30S ribosomal protein S4 A gi|51857872|dbj|BAD42030.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863] Length = 207 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K P+ R+ PG HG R+ KP+ + +QLR Sbjct: 1 MARYTGPVCRLCRREGVKLYLKGEKCYSDKCPIVKRATPPGQHGASRR-KPTEYAIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++YYG + E++F F+ A R +G T L+ LE RLD +VYR F + ARQ Sbjct: 60 KQKARRYYGVL-ERQFERYFEMASRKKGVTGEVLLQTLERRLDNVVYRMGFAASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H+ VNGR VNI SY +EGDV+ V++ S++ + E + A R VP ++SV+ + Sbjct: 119 IVKHSHIEVNGRKVNIPSYLVREGDVVAVRESSREHKRIKELAAAATRTVPAWLSVDPEA 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T +R+P+ + +Q L+VEFYSR Sbjct: 179 LRGTVLRLPNRDE---IDTPVQEQLIVEFYSR 207 >gi|304319733|ref|YP_003853376.1| 30S ribosomal protein S4 [Parvularcula bermudensis HTCC2503] gi|303298636|gb|ADM08235.1| 30S ribosomal protein S4 [Parvularcula bermudensis HTCC2503] Length = 205 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 128/204 (62%), Positives = 159/204 (77%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+++K+KIDRR+GEN+WGRPKSP N R Y PG+HGQRR K S FG QL AKQK+K Sbjct: 1 MSKRQNAKYKIDRRVGENIWGRPKSPFNRREYKPGMHGQRRAGKMSDFGQQLMAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK+F+ I+ EA + +G+T+ +I LESRLD +VYRAKFVPT+FAARQFVNH H Sbjct: 61 YYGNISEKQFQRIYDEAAKRKGNTAELMIGILESRLDAVVYRAKFVPTVFAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG NI SYR K GDV+EV+++SK +A VLEA QL ERD+P+Y+ V+ M AT V Sbjct: 121 VKVNGVRTNIPSYRLKPGDVVEVRERSKNMALVLEALQLPERDIPDYVDVDPKKMTATLV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R+P DVPY M+PNLVVE+Y Sbjct: 181 RVPE-FSDVPYAATMEPNLVVEYY 203 >gi|255014789|ref|ZP_05286915.1| 30S ribosomal protein S4 [Bacteroides sp. 2_1_7] gi|256841040|ref|ZP_05546547.1| ribosomal protein S4 [Parabacteroides sp. D13] gi|298375808|ref|ZP_06985764.1| ribosomal protein S4 [Bacteroides sp. 3_1_19] gi|256736883|gb|EEU50210.1| ribosomal protein S4 [Parabacteroides sp. D13] gi|298266845|gb|EFI08502.1| ribosomal protein S4 [Bacteroides sp. 3_1_19] Length = 201 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A RS+G T L+ LE RLD +VYR PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVYRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V++KSK + + +A +I + +M + Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHSKYPWIEWDQSSMSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ L+VE YS+ Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201 >gi|172049036|sp|A6LEG6|RS4_PARD8 RecName: Full=30S ribosomal protein S4 Length = 201 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A RS+G T L+ LE RLD +VYR PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVYRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V++KSK + + +A +I + +M + Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHSQYPWIEWDQSSMSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ L+VE YS+ Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201 >gi|296283999|ref|ZP_06861997.1| 30S ribosomal protein S4 [Citromicrobium bathyomarinum JL354] Length = 204 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 128/206 (62%), Positives = 158/206 (76%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+ ++EA R +GDT NLI LE RLD +VYRAKF PTIFAARQ VNH H Sbjct: 61 YYGDVTEKQFKRTYQEAARIKGDTGQNLIGLLEQRLDMVVYRAKFAPTIFAARQLVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S R GDVI + K+K +A V+EA L ERD+P+Y++ + + TF Sbjct: 121 ITVNGGKCNIPSRRVVVGDVIGLGAKAKDMALVIEAQSLPERDIPDYVAPDGTD-KVTFT 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L +VPYPV M+PNL+VEFYSR Sbjct: 180 RVP-KLDEVPYPVTMEPNLIVEFYSR 204 >gi|253998040|ref|YP_003050103.1| 30S ribosomal protein S4 [Methylovorus sp. SIP3-4] gi|313200105|ref|YP_004038763.1| 30S ribosomal protein S4 [Methylovorus sp. MP688] gi|253984719|gb|ACT49576.1| ribosomal protein S4 [Methylovorus sp. SIP3-4] gi|312439421|gb|ADQ83527.1| ribosomal protein S4 [Methylovorus sp. MP688] Length = 209 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R++ PG HGQRR + S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIEKRNFPPGQHGQRRNQRLSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FRS + EADR +G T NL+ LE RLD + YR + ARQ Sbjct: 61 KQKVRRIYG-ILEGQFRSYYAEADRLKGITGENLLQLLECRLDNVAYRMGLGSSRTEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H +LVNG+ VNI SY+ + GDV++V + SK + A + AE R PE++ V+ Sbjct: 120 IVRHNSILVNGKRVNIPSYQVRPGDVVQVAEASKSQLRIKGALEAAEQRGFPEWLEVDVK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P + P + +LVVE YS+ Sbjct: 180 ALKGTFKAKPQRDE---LPATINESLVVELYSK 209 >gi|154494405|ref|ZP_02033725.1| hypothetical protein PARMER_03760 [Parabacteroides merdae ATCC 43184] gi|154085849|gb|EDN84894.1| hypothetical protein PARMER_03760 [Parabacteroides merdae ATCC 43184] Length = 201 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKTRIARKFGEAIFGPDK-VLSKKNYPPGQHGNARKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A RS+G T L+ LESRLD +V+R PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLESRLDNVVFRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G VI V++KSK L + +A +I + ++ + Sbjct: 119 ITVDGKVVNIPSYSVKAGQVIGVREKSKSLEVIADALSGFNHSKYPWIEWDQSSLSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ L+VE YS+ Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201 >gi|239996313|ref|ZP_04716837.1| 30S ribosomal protein S4 [Alteromonas macleodii ATCC 27126] gi|332142182|ref|YP_004427920.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep ecotype'] gi|226697796|sp|B4RT52|RS4_ALTMD RecName: Full=30S ribosomal protein S4 gi|327552204|gb|AEA98922.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep ecotype'] Length = 206 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNG+ VNI S+ DV+ V++K+K+ A ++ A +LA +R+ P +I V+ M Sbjct: 119 SHKAIMVNGQVVNIPSFNVSAEDVVSVREKAKKQARIVAALELADQREKPTWIEVDSSKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRVPERTD---LSAEINEQLIVELYSK 206 >gi|114798436|ref|YP_760657.1| 30S ribosomal protein S4 [Hyphomonas neptunium ATCC 15444] gi|123323195|sp|Q0C0T6|RS4_HYPNA RecName: Full=30S ribosomal protein S4 gi|114738610|gb|ABI76735.1| ribosomal protein S4 [Hyphomonas neptunium ATCC 15444] Length = 205 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 128/205 (62%), Positives = 161/205 (78%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+R S+K+KIDRR+GEN+WGR KSP N R+Y PG HGQ R++K S FG+QL AKQK+K Sbjct: 1 MSRRHSAKYKIDRRVGENIWGRAKSPFNKRNYKPGQHGQNRRNKVSDFGMQLMAKQKLKA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI+EK+F + EA R +G+++ NLI LESRLD +VYRAKFVPT+FAARQF+NH H Sbjct: 61 YYGDITEKQFAKTYVEAARMKGNSAENLIGLLESRLDAVVYRAKFVPTVFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V+VNGR NIGS R K GDV++V++KS+ LA VLEA ERD+PEY+ V+ M AT+ Sbjct: 121 VMVNGRRCNIGSARLKPGDVVQVREKSRNLALVLEALGSPERDIPEYVEVDPKAMTATYK 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R+P+ L DVPYPV M+P VVEFYS Sbjct: 181 RVPA-LADVPYPVKMEPAQVVEFYS 204 >gi|213962933|ref|ZP_03391193.1| ribosomal protein S4 [Capnocytophaga sputigena Capno] gi|213954590|gb|EEB65912.1| ribosomal protein S4 [Capnocytophaga sputigena Capno] Length = 201 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS ++Y PG HG RR++K S + +QL+ KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FERKNYPPGQHGLARRRAKRSEYAIQLQEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+F +++++A RS+ T L+ ESRLD +VYR PT AARQ V+HR Sbjct: 60 YTYG-ILEKQFHNLYEKAKRSKHITGEVLLQLCESRLDNVVYRMGIAPTRSAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK L+ + E S A V E+I+ N + + TF Sbjct: 119 HITVNGNIVNIPSYSLKPGDVVGVREKSKSLSVI-ENSLAAHSTVYEWITWNPEKLEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + P ++ L+VE YS+ Sbjct: 178 VAVPQR---IQIPENIKEQLIVELYSK 201 >gi|149181086|ref|ZP_01859586.1| 30S ribosomal protein S4 [Bacillus sp. SG-1] gi|148851173|gb|EDL65323.1| 30S ribosomal protein S4 [Bacillus sp. SG-1] Length = 200 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKISEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F A + +G N ++ LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-VTERQFRNLFDRAGKMQGKHGENFMALLESRLDNVVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V V+G V+I SYR + G I V++KS+ L V EA ++ VP++++ + D + +F Sbjct: 119 VTVDGSRVDIPSYRLQAGQTIGVREKSRNLNIVKEALEV-NSFVPDFLTFDADKLEGSFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|326387399|ref|ZP_08209008.1| 30S ribosomal protein S4 [Novosphingobium nitrogenifigens DSM 19370] gi|326208055|gb|EGD58863.1| 30S ribosomal protein S4 [Novosphingobium nitrogenifigens DSM 19370] Length = 204 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 129/206 (62%), Positives = 161/206 (78%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR++SK+KIDRR+GEN+WGRPKS VN RSYGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRKASKYKIDRRLGENIWGRPKSSVNRRSYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+S ++EA R +GDT NL+ LE RLD +VYR+KF PTIFAARQ VNH H Sbjct: 61 YYGDVTEKQFKSTYQEASRMKGDTGQNLVGLLEQRLDMVVYRSKFAPTIFAARQIVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S R + GDVI + K+K++A + EA L ERDVP+Y+ ++ + TFV Sbjct: 121 IRVNGVKCNIASRRVRPGDVITLGTKAKEMALIAEAQALPERDVPDYVLIDGTD-KVTFV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVP-KLDEVPYPVKMEPNLVVEFYSR 204 >gi|218262262|ref|ZP_03476785.1| hypothetical protein PRABACTJOHN_02459 [Parabacteroides johnsonii DSM 18315] gi|218223485|gb|EEC96135.1| hypothetical protein PRABACTJOHN_02459 [Parabacteroides johnsonii DSM 18315] Length = 201 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKTRIARKFGEAIFGPDK-VLSKKNYPPGQHGNARKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A RS+G T L+ LE RLD +V+R PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G VI V++KSK L + +A +I + ++ + Sbjct: 119 ITVDGKVVNIPSYSVKAGQVIGVREKSKSLEVIADALSGFNHSKYPWIEWDQSSLSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ L+VE YS+ Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201 >gi|26454648|sp|P81288|RS4_BACST RecName: Full=30S ribosomal protein S4; AltName: Full=BS5 Length = 200 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F+EA + G N + LESRLD +VYR T ARQ V H H Sbjct: 60 MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SYR K G I V++KS+ L + EA + A +P+Y+S + + M T+ Sbjct: 119 IIVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLSFDPEKMEGTYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|34499616|ref|NP_903831.1| 30S ribosomal protein S4 [Chromobacterium violaceum ATCC 12472] gi|41017823|sp|Q7NQH6|RS4_CHRVO RecName: Full=30S ribosomal protein S4 gi|34105467|gb|AAQ61822.1| 30S ribosomal protein S4 [Chromobacterium violaceum ATCC 12472] Length = 206 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRALDSKCKLDAAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ F EA R +G T NL+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRNYFAEAVRRKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI SY+ K GDV+ V++K+K+ A ++E LAE+ P ++SV+ M Sbjct: 119 SHKAIVVNGQVVNIPSYQVKAGDVVSVREKAKKQARIVEGLALAEQGGFPSWVSVDSKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + + LVVEFYS+ Sbjct: 179 EGTFKSAPERSE---LSSDINEQLVVEFYSK 206 >gi|315225425|ref|ZP_07867239.1| 30S ribosomal protein S4 [Capnocytophaga ochracea F0287] gi|314944698|gb|EFS96733.1| 30S ribosomal protein S4 [Capnocytophaga ochracea F0287] Length = 201 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 89/207 (42%), Positives = 126/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS ++Y PG HG RR++K S + +QL+ KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FERKNYPPGQHGLARRRAKRSEYAIQLQEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+F +++++A RS+ T L+ ESRLD +VYR PT AARQ V+HR Sbjct: 60 YTYG-ILEKQFHNLYEKAKRSKSITGEVLLQLCESRLDNVVYRMGIAPTRSAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK L+ + E S A V E+I+ N + M TF Sbjct: 119 HITVNGNIVNIPSYSLKPGDVVGVREKSKSLSVI-ENSLAAHSAVYEWITWNPEKMEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + P ++ L+VE YS+ Sbjct: 178 VAVPQR---IQIPENIKEQLIVELYSK 201 >gi|294501546|ref|YP_003565246.1| ribosomal protein S4 [Bacillus megaterium QM B1551] gi|295706894|ref|YP_003599969.1| 30S ribosomal protein S4 [Bacillus megaterium DSM 319] gi|294351483|gb|ADE71812.1| ribosomal protein S4 [Bacillus megaterium QM B1551] gi|294804553|gb|ADF41619.1| 30S ribosomal protein S4 [Bacillus megaterium DSM 319] Length = 200 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKISRRLGLSLSGTGKE-LEKRPYAPGPHGPGQRKKISEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F A + G N + LE+RLD +VYR T ARQ VNH H Sbjct: 60 MYG-VTERQFRNLFVAAGKLTGKHGENFMILLEARLDNLVYRMGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV+G+ V+I SYR + G VI V++KS+ L+ V EA ++ VP+Y++V+ + + TF Sbjct: 119 VLVDGKRVDIPSYRVQPGQVIGVREKSRNLSIVKEALEV-NNFVPDYLTVDAEKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFYSR Sbjct: 178 RLPERSE---LSAEINEALIVEFYSR 200 >gi|320451274|ref|YP_004203370.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01] gi|320151443|gb|ADW22821.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01] Length = 209 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + PK + R Y PG HGQ+R +PS + ++LR Sbjct: 1 MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRTRRPSDYAVRLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG ISE +FR++F+EA R +G T + LESRLD +VYR F + ARQ Sbjct: 61 KQKLRRIYG-ISETQFRNLFEEASRKKGVTGTVFLGLLESRLDNVVYRLGFAASRRQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+ VNGR V++ +YR K GD I + + S+ LA + E + + R V ++S++ + Sbjct: 120 MVRHGHITVNGRRVDLPAYRVKPGDEIAIAEGSRNLAFIRENLEAMKGRKVGPWLSLDVE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F+R+P +D+ PV LVVEFYSR Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVVEFYSR 209 >gi|256820007|ref|YP_003141286.1| 30S ribosomal protein S4 [Capnocytophaga ochracea DSM 7271] gi|256581590|gb|ACU92725.1| ribosomal protein S4 [Capnocytophaga ochracea DSM 7271] Length = 201 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS ++Y PG HG RR++K S + +QL+ KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FERKNYPPGQHGLARRRAKRSEYAIQLQEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+F +++++A RS+ T L+ ESRLD +VYR PT AARQ V+HR Sbjct: 60 YTYG-ILEKQFHNLYEKAKRSKSITGEVLLQLCESRLDNVVYRMGIAPTRSAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK L+ + E S A V E+I+ N + + TF Sbjct: 119 HITVNGNIVNIPSYSLKPGDVVGVREKSKSLSVI-ENSLAAHSAVYEWITWNPEKLEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + P ++ L+VE YS+ Sbjct: 178 VAVPQR---IQIPENIKEQLIVELYSK 201 >gi|83648828|ref|YP_437263.1| ribosomal protein S4 [Hahella chejuensis KCTC 2396] gi|123530606|sp|Q2S936|RS4_HAHCH RecName: Full=30S ribosomal protein S4 gi|83636871|gb|ABC32838.1| ribosomal protein S4 [Hahella chejuensis KCTC 2396] Length = 206 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HGQ R+ + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGARALDSKCNMETAPGQHGQ-RRGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARIKGATGENLLQLLERRLDNVVYRMGFGSTRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ +LVNG++VNI SY+ K GDV+ +++KSK + + +L A+R E+I V+ M Sbjct: 119 SHKAILVNGKAVNIPSYQVKPGDVVSIREKSKNQLRIKGSLELAAQRATLEWIEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P P + NL+VE YS+ Sbjct: 179 SGTFKSVPERTDLSP---DINENLIVELYSK 206 >gi|92117193|ref|YP_576922.1| 30S ribosomal protein S4 [Nitrobacter hamburgensis X14] gi|122418035|sp|Q1QMT5|RS4_NITHX RecName: Full=30S ribosomal protein S4 gi|91800087|gb|ABE62462.1| SSU ribosomal protein S4P [Nitrobacter hamburgensis X14] Length = 205 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 138/206 (66%), Positives = 165/206 (80%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +ISE++F +I+ EA R +GD+ NLI LE RLDT+VYRAKFVPT+FAARQF+NH H Sbjct: 61 YYANISERQFYAIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVPTMFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SY+ K GD IEVK SKQLA VLEA+QLAERDVP++I +H+ A FV Sbjct: 121 VKVNGRRVNIPSYKLKVGDAIEVKDASKQLALVLEANQLAERDVPDFIDADHNKQTAKFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP L DVP+ V M+P+L+VEFYSR Sbjct: 181 RIPH-LADVPFAVQMEPHLIVEFYSR 205 >gi|315127932|ref|YP_004069935.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913] gi|315016446|gb|ADT69784.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913] gi|332037269|gb|EGI73724.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis ANT/505] Length = 206 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNGR VNI SY D + +++KSK A ++ A +LAE R+ P ++ V+ + Sbjct: 119 SHKAILVNGRVVNIPSYVITPEDTVVIREKSKTQARIIAALELAEQREKPTWVEVDGKKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +F R+P + L+VE YS+ Sbjct: 179 EGSFKRLPERSD---LSADINEQLIVELYSK 206 >gi|56421337|ref|YP_148655.1| 30S ribosomal protein S4 [Geobacillus kaustophilus HTA426] gi|61215360|sp|Q5KW49|RS4_GEOKA RecName: Full=30S ribosomal protein S4 gi|56381179|dbj|BAD77087.1| 30S ribosomal protein S4 [Geobacillus kaustophilus HTA426] Length = 200 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F+EA + G N + LESRLD +VYR T ARQ V H H Sbjct: 60 MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G VNI SYR K G I V++KS+ L + EA + A +P+Y++ N + M T+ Sbjct: 119 ILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLTFNPEKMEGTYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|85373950|ref|YP_458012.1| 30S ribosomal protein S4 [Erythrobacter litoralis HTCC2594] gi|122544575|sp|Q2NAS6|RS4_ERYLH RecName: Full=30S ribosomal protein S4 gi|84787033|gb|ABC63215.1| ribosomal protein S4 [Erythrobacter litoralis HTCC2594] Length = 204 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 129/206 (62%), Positives = 160/206 (77%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRK K S FGLQLRAKQK+K Sbjct: 1 MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKGKTSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR + EA R +GDT NLI LE RLD +VYRAKF PT+FAARQ VNH H Sbjct: 61 YYGDVTEKQFRRTYAEASRMKGDTGQNLIGLLEQRLDMVVYRAKFAPTVFAARQIVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S R K GDVI + K+K++A V+EA L ER++P+Y++ + ++ TF Sbjct: 121 IYVNGVKTNIPSARVKVGDVISLGNKAKEMALVIEAQSLPEREIPDYVAPDGND-KVTFT 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVP-KLDEVPYPVTMEPNLVVEFYSR 204 >gi|298372562|ref|ZP_06982552.1| ribosomal protein S4 [Bacteroidetes oral taxon 274 str. F0058] gi|298275466|gb|EFI17017.1| ribosomal protein S4 [Bacteroidetes oral taxon 274 str. F0058] Length = 202 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE L+G K ++ +++ PG HGQ R K S + QLR KQK K Sbjct: 1 MARYIGPKSKISRKFGEPLFGSDK-VLSRKNFPPGQHGQARSRKKSEYAKQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F +A R +G T LI LE RLD +VYR PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFVKAQRQKGITGAILIQLLECRLDNVVYRLGMAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNG +NI SY K+GD+I V++K K + + EA ++ + + M F+ Sbjct: 119 IIVNGEVLNIPSYIVKQGDIIGVREKDKSMIVITEALAGHNHSKYPWLEWDKNLMAGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P +Q L+VE YS+ Sbjct: 179 HIPER---EDIPENIQEQLIVELYSK 201 >gi|148554062|ref|YP_001261644.1| 30S ribosomal protein S4 [Sphingomonas wittichii RW1] gi|172048096|sp|A5V5E0|RS4_SPHWW RecName: Full=30S ribosomal protein S4 gi|148499252|gb|ABQ67506.1| SSU ribosomal protein S4P [Sphingomonas wittichii RW1] Length = 204 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 129/206 (62%), Positives = 160/206 (77%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QL+AKQK+K Sbjct: 1 MSKRTSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+ + EA R +GDTS NLI LE RLD +VYRAKF PTIFAARQ V+H H Sbjct: 61 YYGDVTEKQFKRNYTEASRMKGDTSQNLIGLLERRLDAVVYRAKFAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S + K GD I + K++++A VLEA L+ERDVPEYI+ + TFV Sbjct: 121 IRVNGVKCNIASRQVKPGDEISLGSKAQEMALVLEAQGLSERDVPEYIAQDGGA-KVTFV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVPT-LDEVPYPVKMEPNLVVEFYSR 204 >gi|312795803|ref|YP_004028725.1| SSU ribosomal protein S4P [Burkholderia rhizoxinica HKI 454] gi|312167578|emb|CBW74581.1| SSU ribosomal protein S4P [Burkholderia rhizoxinica HKI 454] Length = 207 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +GLQLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLDT+VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDTVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNH 172 Q V+H+ + VNG+ NI S + K GDV+ V++++K+ + EA LAE + P ++SV+ Sbjct: 117 QLVSHKAITVNGQVANIPSLQVKAGDVVAVREQAKKQTRIQEALSLAEQNNFPGWVSVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + +L+VE YSR Sbjct: 177 KKFEGTFKHVPERSD---IAGDINESLIVELYSR 207 >gi|77361711|ref|YP_341286.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis TAC125] gi|90101708|sp|Q3IJJ5|RS4_PSEHT RecName: Full=30S ribosomal protein S4 gi|76876622|emb|CAI87844.1| 30S ribosomal subunit protein S4 [Pseudoalteromonas haloplanktis TAC125] Length = 206 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNGR VN+ SY D + +++KSK A ++ A +LAE R+ P ++ V+ + Sbjct: 119 SHKAILVNGRVVNVPSYVIAPEDTVVIREKSKTQARIIAALELAEQREKPTWVEVDGKKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +F R+P + L+VE YS+ Sbjct: 179 EGSFKRLPERSD---LSADINEQLIVELYSK 206 >gi|224827041|ref|ZP_03700138.1| ribosomal protein S4 [Lutiella nitroferrum 2002] gi|224600707|gb|EEG06893.1| ribosomal protein S4 [Lutiella nitroferrum 2002] Length = 206 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG RKS+ S +G+QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRALDSKCKLDSIPGQHGA-RKSRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ F EA R +G T NL+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRNYFAEASRLKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI S++ K GDV+ +++K+K+ A ++E LAE+ P ++SV+ M Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVAIREKAKKQARIVEGLALAEQGGFPSWVSVDPKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F P + + LVVEFYS+ Sbjct: 179 EGVFKSAPERSE---LAGDINEQLVVEFYSK 206 >gi|251793850|ref|YP_003008582.1| 30S ribosomal protein S4 [Aggregatibacter aphrophilus NJ8700] gi|247535249|gb|ACS98495.1| ribosomal protein S4 [Aggregatibacter aphrophilus NJ8700] Length = 206 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|52426079|ref|YP_089216.1| 30S ribosomal protein S4 [Mannheimia succiniciproducens MBEL55E] gi|61215476|sp|Q65QX9|RS4_MANSM RecName: Full=30S ribosomal protein S4 gi|52308131|gb|AAU38631.1| RpsD protein [Mannheimia succiniciproducens MBEL55E] Length = 206 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|94497376|ref|ZP_01303947.1| 30S ribosomal protein S4 [Sphingomonas sp. SKA58] gi|94423239|gb|EAT08269.1| 30S ribosomal protein S4 [Sphingomonas sp. SKA58] Length = 204 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 125/206 (60%), Positives = 158/206 (76%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRSSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI+EK+F+ + EA R +GDT NLI LE RLD +VYRAKF PTI++ARQ V+H H Sbjct: 61 YYGDITEKQFKKNYVEAARMKGDTGQNLIGLLERRLDALVYRAKFAPTIWSARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S K GD I + +K++++A VLEA L ERD+P+Y+S + T+V Sbjct: 121 IYVNGVKCNIASRLVKPGDEITLGKKAQEMALVLEAQNLPERDIPDYVSPDGAA-KVTYV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVPT-LDEVPYPVKMEPNLVVEFYSR 204 >gi|229496321|ref|ZP_04390041.1| ribosomal protein S4 [Porphyromonas endodontalis ATCC 35406] gi|229316899|gb|EEN82812.1| ribosomal protein S4 [Porphyromonas endodontalis ATCC 35406] Length = 209 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR GE ++G K ++ ++Y PG HG+ R+ K S +G+QL KQK K Sbjct: 9 MARYTGPKSKVARRFGEPIFGPDK-VLSKKNYPPGQHGEGRRRKSSEYGIQLAEKQKAKY 67 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++FK A RS+G T L+ LE RLD IVYR PT AARQ V+HRH Sbjct: 68 TYGVL-ERQFRNLFKAAQRSKGVTGEVLLQLLECRLDNIVYRLGIAPTRAAARQIVSHRH 126 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G +I V+++ K + + + +I ++ +M F+ Sbjct: 127 ITVDGNVVNIPSYSVKPGQIIAVRERDKSMEVIANSLAGFNHGKYSWIEWDNSSMSGKFL 186 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ L+VE YS+ Sbjct: 187 NIPQRAD---IPENIKEQLIVELYSK 209 >gi|304315968|ref|YP_003851113.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777470|gb|ADL68029.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 206 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S K+ RR G L+ + K P R Y PG HGQ +K K + +G QLR Sbjct: 1 MARYTESTCKLCRREGMKLFLKGDKCYTEKCPFARRPYAPGQHGQNKK-KLTNYGTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++YYG + E++F F+EA+R +G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKLRRYYGVL-ERQFERYFEEAERMKGITGDNLLQLLERRLDNVVYRLSIASSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 FV H H+LVNG+ V+I SY K GDVI VK SK L + + A ++P+++ N D+ Sbjct: 119 FVAHGHILVNGKKVDIPSYLVKAGDVISVKDSSKSLEVIKNNVE-ASTNIPDWLDFNKDS 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+ + + PV + +L+VE YSR Sbjct: 178 LEGKVLSLPTR-EHIDLPV--EEHLIVELYSR 206 >gi|325577150|ref|ZP_08147634.1| 30S ribosomal protein S4 [Haemophilus parainfluenzae ATCC 33392] gi|325160732|gb|EGC72853.1| 30S ribosomal protein S4 [Haemophilus parainfluenzae ATCC 33392] Length = 206 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|144900824|emb|CAM77688.1| 30S ribosomal protein S4 [Magnetospirillum gryphiswaldense MSR-1] Length = 205 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 124/207 (59%), Positives = 152/207 (73%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT-RSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M+KR +K KI+RR+G NLWGR KSP+ + PG HG RRK KPS FG QL AKQK+K Sbjct: 1 MTKRIEAKFKINRRLGVNLWGRGKSPLARGKETPPGQHGARRK-KPSDFGTQLMAKQKLK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG+ISEK+FR ++ EA R RGDTS NLI LE RLD +VYR K + F ARQ +NH Sbjct: 60 GYYGNISEKQFRKLYDEAVRRRGDTSENLIGLLERRLDAVVYRMKMAVSPFQARQVINHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ +NI SY+ K+GD+I VKQKSK LA +LEA+Q ERDVP+Y+ V+H M TF Sbjct: 120 HIHVNGKRLNIASYQVKDGDIITVKQKSKDLAIILEAAQSPERDVPDYLEVDHKEMKGTF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R P L DVPYP M+PNLV+EFYSR Sbjct: 180 IRAP-KLSDVPYPCQMEPNLVIEFYSR 205 >gi|261880856|ref|ZP_06007283.1| 30S ribosomal protein S4 [Prevotella bergensis DSM 17361] gi|270332363|gb|EFA43149.1| 30S ribosomal protein S4 [Prevotella bergensis DSM 17361] Length = 201 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K + R++ PG HG R+ K S +G+QL KQK K Sbjct: 1 MARYIGPKSRISRRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKQSEYGIQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F +A +S G T L+ LE RLD +VYR PT AARQ V+H+H Sbjct: 60 TYGVL-ERQFRNLFVKAAKSGGITGEVLLQLLECRLDNVVYRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G ++ V+++SK L ++ A ++ + F+ Sbjct: 119 ITVDGQVVNIPSYSVKAGQIVGVRERSKSLEAIDAALAGFNHSKYPWLEWDEHTKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HTPER---EDIPENIKEQLIVELYSK 201 >gi|261418186|ref|YP_003251868.1| 30S ribosomal protein S4 [Geobacillus sp. Y412MC61] gi|297529040|ref|YP_003670315.1| ribosomal protein S4 [Geobacillus sp. C56-T3] gi|319767854|ref|YP_004133355.1| ribosomal protein S4 [Geobacillus sp. Y412MC52] gi|261374643|gb|ACX77386.1| ribosomal protein S4 [Geobacillus sp. Y412MC61] gi|297252292|gb|ADI25738.1| ribosomal protein S4 [Geobacillus sp. C56-T3] gi|317112720|gb|ADU95212.1| ribosomal protein S4 [Geobacillus sp. Y412MC52] Length = 200 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPMWKVSRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F+EA + G N + LESRLD +VYR T ARQ V H H Sbjct: 60 MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G VNI SYR K G I V++KS+ L + EA + A +P+Y++ N + M T+ Sbjct: 119 ILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLTFNPEKMEGTYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|68249397|ref|YP_248509.1| 30S ribosomal protein S4 [Haemophilus influenzae 86-028NP] gi|145628304|ref|ZP_01784105.1| 30S ribosomal protein S4 [Haemophilus influenzae 22.1-21] gi|145630548|ref|ZP_01786328.1| 30S ribosomal protein S4 [Haemophilus influenzae R3021] gi|145632160|ref|ZP_01787895.1| 30S ribosomal protein S4 [Haemophilus influenzae 3655] gi|145634787|ref|ZP_01790495.1| 30S ribosomal protein S4 [Haemophilus influenzae PittAA] gi|145636640|ref|ZP_01792307.1| 30S ribosomal protein S4 [Haemophilus influenzae PittHH] gi|145638397|ref|ZP_01794007.1| 30S ribosomal protein S4 [Haemophilus influenzae PittII] gi|145640900|ref|ZP_01796482.1| 30S ribosomal protein S4 [Haemophilus influenzae R3021] gi|148826554|ref|YP_001291307.1| 30S ribosomal protein S4 [Haemophilus influenzae PittEE] gi|148827990|ref|YP_001292743.1| 30S ribosomal protein S4 [Haemophilus influenzae PittGG] gi|229844669|ref|ZP_04464808.1| 30S ribosomal protein S4 [Haemophilus influenzae 6P18H1] gi|229845852|ref|ZP_04465964.1| 30S ribosomal protein S4 [Haemophilus influenzae 7P49H1] gi|260581618|ref|ZP_05849415.1| ribosomal protein S4 [Haemophilus influenzae NT127] gi|319775264|ref|YP_004137752.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae F3047] gi|319897704|ref|YP_004135901.1| 30S ribosomal subunit protein s4 [Haemophilus influenzae F3031] gi|329122807|ref|ZP_08251379.1| 30S ribosomal protein S4 [Haemophilus aegyptius ATCC 11116] gi|81336176|sp|Q4QM98|RS4_HAEI8 RecName: Full=30S ribosomal protein S4 gi|172048051|sp|A5UDS3|RS4_HAEIE RecName: Full=30S ribosomal protein S4 gi|172048057|sp|A5UHV4|RS4_HAEIG RecName: Full=30S ribosomal protein S4 gi|68057596|gb|AAX87849.1| 30S ribosomal protein S4 [Haemophilus influenzae 86-028NP] gi|144980079|gb|EDJ89738.1| 30S ribosomal protein S4 [Haemophilus influenzae 22.1-21] gi|144983938|gb|EDJ91380.1| 30S ribosomal protein S4 [Haemophilus influenzae R3021] gi|144987067|gb|EDJ93597.1| 30S ribosomal protein S4 [Haemophilus influenzae 3655] gi|145267953|gb|EDK07949.1| 30S ribosomal protein S4 [Haemophilus influenzae PittAA] gi|145270166|gb|EDK10102.1| 30S ribosomal protein S4 [Haemophilus influenzae PittHH] gi|145272726|gb|EDK12633.1| 30S ribosomal protein S4 [Haemophilus influenzae PittII] gi|145274414|gb|EDK14278.1| 30S ribosomal protein S4 [Haemophilus influenzae 22.4-21] gi|148716714|gb|ABQ98924.1| 30S ribosomal protein S4 [Haemophilus influenzae PittEE] gi|148719232|gb|ABR00360.1| 30S ribosomal protein S4 [Haemophilus influenzae PittGG] gi|229810856|gb|EEP46573.1| 30S ribosomal protein S4 [Haemophilus influenzae 7P49H1] gi|229812383|gb|EEP48073.1| 30S ribosomal protein S4 [Haemophilus influenzae 6P18H1] gi|260095211|gb|EEW79102.1| ribosomal protein S4 [Haemophilus influenzae NT127] gi|309751537|gb|ADO81521.1| 30S ribosomal protein S4 [Haemophilus influenzae R2866] gi|309973707|gb|ADO96908.1| 30S ribosomal protein S4 [Haemophilus influenzae R2846] gi|317433210|emb|CBY81585.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae F3031] gi|317449855|emb|CBY86066.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae F3047] gi|327472071|gb|EGF17509.1| 30S ribosomal protein S4 [Haemophilus aegyptius ATCC 11116] Length = 206 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ +++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAIREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|16272743|ref|NP_438961.1| 30S ribosomal protein S4 [Haemophilus influenzae Rd KW20] gi|260579893|ref|ZP_05847723.1| ribosomal protein S4 [Haemophilus influenzae RdAW] gi|1173260|sp|P44373|RS4_HAEIN RecName: Full=30S ribosomal protein S4 gi|1573812|gb|AAC22460.1| ribosomal protein S4 (rpS4) [Haemophilus influenzae Rd KW20] gi|260093177|gb|EEW77110.1| ribosomal protein S4 [Haemophilus influenzae RdAW] gi|301169520|emb|CBW29121.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae 10810] Length = 206 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFATTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ +++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAIREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|52081461|ref|YP_080252.1| 30S ribosomal protein S4 [Bacillus licheniformis ATCC 14580] gi|52786836|ref|YP_092665.1| 30S ribosomal protein S4 [Bacillus licheniformis ATCC 14580] gi|319647367|ref|ZP_08001589.1| 30S ribosomal protein S4 [Bacillus sp. BT1B_CT2] gi|81690928|sp|Q65G42|RS4_BACLD RecName: Full=30S ribosomal protein S4 gi|52004672|gb|AAU24614.1| ribosomal protein S4 [Bacillus licheniformis ATCC 14580] gi|52349338|gb|AAU41972.1| RpsD [Bacillus licheniformis ATCC 14580] gi|317390714|gb|EFV71519.1| 30S ribosomal protein S4 [Bacillus sp. BT1B_CT2] Length = 200 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + LESRLD IVYR T ARQ VNH H Sbjct: 60 MYG-VNERQFRNLFDKAAKMAGKHGENFMILLESRLDNIVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV+G V+I SY+ K G I +++KS+ L+ V EA ++ VPEY++ + + + + Sbjct: 119 VLVDGSRVDIPSYQVKPGQTISLREKSQNLSVVKEAVEV-NNFVPEYLTFDAEKLEGSLT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200 >gi|15603256|ref|NP_246330.1| 30S ribosomal protein S4 [Pasteurella multocida subsp. multocida str. Pm70] gi|26399488|sp|Q9CL53|RS4_PASMU RecName: Full=30S ribosomal protein S4 gi|12721766|gb|AAK03475.1| RpS4 [Pasteurella multocida subsp. multocida str. Pm70] Length = 206 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|330814238|ref|YP_004358477.1| SSU ribosomal protein S4p (S9e) [Candidatus Pelagibacter sp. IMCC9063] gi|327487333|gb|AEA81738.1| SSU ribosomal protein S4p (S9e) [Candidatus Pelagibacter sp. IMCC9063] Length = 206 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 118/207 (57%), Positives = 162/207 (78%), Gaps = 2/207 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 M+KR +KHK+DRR+G NLWGRPKSP NTR++GPG HGQ R + KPS + +QL+AKQK+K Sbjct: 1 MTKRIQAKHKVDRRLGVNLWGRPKSPFNTRAFGPGQHGQTRARGKPSDYKIQLQAKQKLK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG+++E++FR++F+EA+R RG+T NL+ LESRLD +VYRAKF T+F ARQ +NH Sbjct: 61 GYYGNLNERQFRNVFQEAERVRGNTGENLVGILESRLDAVVYRAKFALTVFQARQIINHG 120 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ VN+GSY KE D IEV+ SKQL ++L + ER+VPEY+ V+H + A + Sbjct: 121 HIKVNGKKVNVGSYSLKENDEIEVRDSSKQLTTILSSVASKEREVPEYVVVDHKQLTAKY 180 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P ++++PYP IM+PNLVVE+YSR Sbjct: 181 TRVP-KMEEIPYPAIMEPNLVVEYYSR 206 >gi|120609325|ref|YP_969003.1| 30S ribosomal protein S4 [Acidovorax citrulli AAC00-1] gi|152060922|sp|A1TJU1|RS4_ACIAC RecName: Full=30S ribosomal protein S4 gi|120587789|gb|ABM31229.1| SSU ribosomal protein S4P [Acidovorax citrulli AAC00-1] Length = 207 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 134/214 (62%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S FGLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ ADR +G+T NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAADRRKGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GDV+ V++KSK+ A ++EA QLA++ +P ++ VN Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKPGDVVAVREKSKKQARIVEALQLAQQVGIPAWVEVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D + TF + P + + + +L+VE YSR Sbjct: 177 DKVEGTFKKAPDRDE---FGADINESLIVELYSR 207 >gi|307292704|ref|ZP_07572550.1| ribosomal protein S4 [Sphingobium chlorophenolicum L-1] gi|306880770|gb|EFN11986.1| ribosomal protein S4 [Sphingobium chlorophenolicum L-1] Length = 204 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 127/206 (61%), Positives = 158/206 (76%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRSSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI+EK+F+ + EA R +GDT NLI LE RLD +VYRAKF PTIF+ARQ V+H H Sbjct: 61 YYGDITEKQFKKSYIEAARMKGDTGQNLIGLLERRLDAVVYRAKFAPTIFSARQIVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S K GD I + +K++++A VLEA L ERD+P+Y+S + T+V Sbjct: 121 IYVNGVKCNIASRLVKPGDEITLGKKAQEMALVLEAQSLPERDIPDYVSPDGAA-KITYV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+PS L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVPS-LDEVPYPVKMEPNLVVEFYSR 204 >gi|103486278|ref|YP_615839.1| 30S ribosomal protein S4 [Sphingopyxis alaskensis RB2256] gi|123380035|sp|Q1GV16|RS4_SPHAL RecName: Full=30S ribosomal protein S4 gi|98976355|gb|ABF52506.1| SSU ribosomal protein S4P [Sphingopyxis alaskensis RB2256] Length = 203 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 129/206 (62%), Positives = 160/206 (77%), Gaps = 3/206 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRQSAKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI+EK+F+ + EA R +GDT NLI LE RLD +VYRAKF PTIF+ARQ V+H H Sbjct: 61 YYGDITEKQFKKNYIEASRMKGDTGQNLIGLLERRLDAVVYRAKFTPTIFSARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG NI S K GD I + +K++++A V EA L ERD+PEY++V+ AT+V Sbjct: 121 VYVNGVKCNIASRLVKPGDEITLGKKAQEMALVAEAQSLPERDLPEYLAVDGTK--ATYV 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VPYPV M+PNLVVEFYSR Sbjct: 179 RVPT-LDEVPYPVKMEPNLVVEFYSR 203 >gi|290477169|ref|YP_003470084.1| 30S ribosomal subunit protein S4 [Xenorhabdus bovienii SS-2004] gi|289176517|emb|CBJ83326.1| 30S ribosomal subunit protein S4 [Xenorhabdus bovienii SS-2004] Length = 206 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRTYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAESRQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNG VNI SY+ DV+ V++K+K+ A + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGCVVNIASYQVSPNDVVSVREKAKKQARIKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|284006139|emb|CBA71381.1| 30S ribosomal protein S4 [Arsenophonus nasoniae] Length = 206 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLNLLEGRLDNTVYRMGFGATRAEARQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNG+ VNI SY+ DVI V++K+K+ + + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGQVVNIASYQVSPNDVISVREKAKKQSRIKAALELAEQREKPSWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERAD---LSADINEHLIVELYSK 206 >gi|293393288|ref|ZP_06637602.1| 30S ribosomal protein S4 [Serratia odorifera DSM 4582] gi|291424198|gb|EFE97413.1| 30S ribosomal protein S4 [Serratia odorifera DSM 4582] Length = 206 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKGIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|56552262|ref|YP_163101.1| 30S ribosomal protein S4 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761673|ref|ZP_04759760.1| RNA-binding S4 domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260754038|ref|YP_003226931.1| 30S ribosomal protein S4 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|7388203|sp|Q9Z5U7|RS4_ZYMMO RecName: Full=30S ribosomal protein S4 gi|4378846|gb|AAD19714.1| 30S ribosomal protein S4 [Zymomonas mobilis subsp. mobilis ZM4] gi|56543836|gb|AAV89990.1| RNA-binding S4 domain protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241373981|gb|EER63514.1| RNA-binding S4 domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553401|gb|ACV76347.1| ribosomal protein S4 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 204 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 131/206 (63%), Positives = 160/206 (77%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR SSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRR+SK S +GLQL+AKQK+K Sbjct: 1 MSKRHSSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRRSKISDYGLQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FR + +A + +GDTS NLI LE RLD IVYRAKF PTIFAARQ V+H H Sbjct: 61 YYGDVTEKQFRRSYDDASKLKGDTSQNLIGILERRLDMIVYRAKFAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S R GD I + K++++A VLEA LAERD+P+Y+ + + TFV Sbjct: 121 IRVNGVKCNIASRRVNPGDEISLGSKAQEMALVLEAQSLAERDIPDYVLPDGNT-KVTFV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ L +VPYPV M+PNLVVEFYSR Sbjct: 180 RIPT-LDEVPYPVKMEPNLVVEFYSR 204 >gi|323527577|ref|YP_004229730.1| 30S ribosomal protein S4 [Burkholderia sp. CCGE1001] gi|323384579|gb|ADX56670.1| ribosomal protein S4 [Burkholderia sp. CCGE1001] Length = 207 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ ++VNG NI S + K GDV+ V+++SK+ A +LEA LAE+ +P ++SV+ Sbjct: 117 QLVSHKAIMVNGVVSNIPSMQVKAGDVVAVREQSKKQARILEALSLAEQGGMPSWVSVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + + +L+VE YSR Sbjct: 177 KKFEGTFKQKPERSE---IAGDINESLIVELYSR 207 >gi|238025957|ref|YP_002910188.1| 30S ribosomal protein S4 [Burkholderia glumae BGR1] gi|237875151|gb|ACR27484.1| 30S ribosomal protein S4 [Burkholderia glumae BGR1] Length = 207 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 128/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG + NI S + K GDVI +++KSK+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGVASNIPSLQVKPGDVIAIREKSKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAE---IAGDINESLIVELYSR 207 >gi|254418524|ref|ZP_05032248.1| ribosomal protein S4 [Brevundimonas sp. BAL3] gi|196184701|gb|EDX79677.1| ribosomal protein S4 [Brevundimonas sp. BAL3] Length = 205 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 133/204 (65%), Positives = 164/204 (80%), Gaps = 1/204 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+KIDR +GENLWGR KSPVN RSYGPG HGQRRKSK S FGLQL+AKQK+K Sbjct: 1 MSKRHSAKYKIDRAMGENLWGRAKSPVNKRSYGPGQHGQRRKSKVSDFGLQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+F + EA R +G+TS NLI LESRLD IVYRAKFVPT++AARQFV+H H Sbjct: 61 YYGNITEKQFAKTYDEAARRKGNTSENLIGLLESRLDAIVYRAKFVPTVWAARQFVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG+ V+I SYR K DV+ VK+KS+ +A V+EA Q +ERDVP+Y+ ++ + +V Sbjct: 121 VLVNGKKVDISSYRVKPEDVVTVKEKSRNMALVIEAQQSSERDVPDYLELSDRSFSVRYV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R+P L DVPYPV M+PNLVVE+Y Sbjct: 181 RVPE-LTDVPYPVKMEPNLVVEYY 203 >gi|85708538|ref|ZP_01039604.1| 30S ribosomal protein S4 [Erythrobacter sp. NAP1] gi|85690072|gb|EAQ30075.1| 30S ribosomal protein S4 [Erythrobacter sp. NAP1] Length = 204 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 131/206 (63%), Positives = 162/206 (78%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRKSK S FGLQLRAKQK+K Sbjct: 1 MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKSKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+FRS +K+A R +GDT NLI LE RLD IVYRAKF PTIFAARQ V+H H Sbjct: 61 YYGDVTEKQFRSTYKDATRMKGDTGQNLIGLLERRLDMIVYRAKFAPTIFAARQIVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S RC GDVI + K+K++A V+EA L ER++P+Y++ + ++ F Sbjct: 121 IYVNGVKCNIASRRCDVGDVISLGNKAKEMALVIEAQSLPEREIPDYVAPDGND-KVQFT 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVP-KLDEVPYPVTMEPNLVVEFYSR 204 >gi|301155354|emb|CBW14820.1| 30S ribosomal subunit protein S4 [Haemophilus parainfluenzae T3T1] Length = 206 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDIAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|315633478|ref|ZP_07888768.1| 30S ribosomal protein S4 [Aggregatibacter segnis ATCC 33393] gi|315477520|gb|EFU68262.1| 30S ribosomal protein S4 [Aggregatibacter segnis ATCC 33393] Length = 206 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DVI V++KSK+ A + + +LAE ++ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVISVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|152978165|ref|YP_001343794.1| 30S ribosomal protein S4 [Actinobacillus succinogenes 130Z] gi|171704198|sp|A6VLL2|RS4_ACTSZ RecName: Full=30S ribosomal protein S4 gi|150839888|gb|ABR73859.1| ribosomal protein S4 [Actinobacillus succinogenes 130Z] Length = 206 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ +++KSK+ A + + +LAE ++ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAIREKSKKQARIKASLELAEQKEKPTWLEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|326315414|ref|YP_004233086.1| 30S ribosomal protein S4 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372250|gb|ADX44519.1| ribosomal protein S4 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 207 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 89/214 (41%), Positives = 134/214 (62%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S FGLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ ADR +G+T NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAADRRKGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GD++ V++KSK+ A ++EA QLA++ +P ++ VN Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKPGDIVAVREKSKKQARIVEALQLAQQVGIPAWVEVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D + TF + P + + + +L+VE YSR Sbjct: 177 DKVEGTFKKAPDRDE---FGADINESLIVELYSR 207 >gi|71083832|ref|YP_266552.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1062] gi|91763131|ref|ZP_01265095.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1002] gi|90101703|sp|Q4FLJ0|RS4_PELUB RecName: Full=30S ribosomal protein S4 gi|71062945|gb|AAZ21948.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1062] gi|91717544|gb|EAS84195.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1002] Length = 205 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 125/206 (60%), Positives = 159/206 (77%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR S+KHKIDRR+ NLWGRPKSP N R YGPG HGQ RK KPS +G+QL+AKQK+K Sbjct: 1 MTKRISAKHKIDRRLKINLWGRPKSPFNKRDYGPGQHGQGRKGKPSDYGIQLQAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+E++FR+I+K+A +GDT NLI LE RLD++VYRA+F T+F+ARQ +NH H Sbjct: 61 YYGNINERQFRNIYKKATMLKGDTGENLIGLLERRLDSVVYRARFSTTVFSARQLINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNIGSY KE D+IE++ KSKQLA + A ER+ PEYI+++ N TFV Sbjct: 121 VRVNGKKVNIGSYVVKEEDIIEIRDKSKQLAIIDIALASKERETPEYINLDEKNKKVTFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P +VPYPVIM+PNLV+E+YSR Sbjct: 181 RTP-KFDEVPYPVIMEPNLVIEYYSR 205 >gi|237806899|ref|YP_002891339.1| 30S ribosomal protein S4 [Tolumonas auensis DSM 9187] gi|259495302|sp|C4L7V4|RS4_TOLAT RecName: Full=30S ribosomal protein S4 gi|237499160|gb|ACQ91753.1| ribosomal protein S4 [Tolumonas auensis DSM 9187] Length = 206 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I EK+FR+ ++EA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILEKQFRNYYREATRLKGNTGENLLQLLEGRLDNVVYRMGFATTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ ++VNG+ VNI S + DV+ V++K+K+ A + A L A+R+ P +I +N D M Sbjct: 119 SHKAIVVNGKVVNIPSSQVSPEDVVTVREKAKKQARIKAALDLAAQREKPTWIEINADKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R+P + L+VE YS+ Sbjct: 179 EGVYKRLPERSD---LSADINEQLIVELYSK 206 >gi|330432100|gb|AEC17159.1| 30S ribosomal protein S4 [Gallibacterium anatis UMN179] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DVI V++KSK+ A + + +LAE ++ P ++ V+ M Sbjct: 119 SHKAIIVNGRVVNIPSFQVSVDDVIAVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|307731230|ref|YP_003908454.1| 30S ribosomal protein S4 [Burkholderia sp. CCGE1003] gi|307585765|gb|ADN59163.1| ribosomal protein S4 [Burkholderia sp. CCGE1003] Length = 207 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ ++VNG NI S + K GDV+ V+++SK+ A +LEA LAE+ +P ++SV+ Sbjct: 117 QLVSHKAIMVNGVVSNIPSMQVKAGDVVAVREQSKKQARILEALSLAEQGGMPSWVSVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + +L+VE YSR Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207 >gi|323706478|ref|ZP_08118039.1| ribosomal protein S4 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534198|gb|EGB23988.1| ribosomal protein S4 [Thermoanaerobacterium xylanolyticum LX-11] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 123/212 (58%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S K+ RR G L+ + K P R Y PG HGQ +K K + +G QLR Sbjct: 1 MARYTESTCKLCRREGMKLFLKGDKCYTEKCPFARRPYAPGQHGQNKK-KLTNYGTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++YYG + E++F F+EA+R +G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKLRRYYGVL-ERQFERYFEEAERMKGITGDNLLQLLERRLDNVVYRLSIASSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 FV+H H+LVNG+ V+I SY K GDV+ VK SK L + + A ++P+++ N D+ Sbjct: 119 FVSHGHILVNGKKVDIPSYLVKAGDVVSVKDSSKSLDVIKNNVE-ASTNIPDWLDFNRDS 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+ + ++ +L+VE YSR Sbjct: 178 LEGKVLSLPTR---EHIDLPIEEHLIVELYSR 206 >gi|302384228|ref|YP_003820051.1| ribosomal protein S4 [Brevundimonas subvibrioides ATCC 15264] gi|302194856|gb|ADL02428.1| ribosomal protein S4 [Brevundimonas subvibrioides ATCC 15264] Length = 205 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 131/205 (63%), Positives = 157/205 (76%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+KIDR +GENLWGR KSPVN RSYGPG HGQRRKSK S FGLQL+AKQK+K Sbjct: 1 MSKRHSAKYKIDRAMGENLWGRAKSPVNKRSYGPGQHGQRRKSKVSDFGLQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +++EK+FR + EA R +G+TS LI LE+RLD VYRAKFVPT +AARQFVNH H Sbjct: 61 YYANLTEKQFRKTYDEAARRKGNTSETLIGLLEARLDATVYRAKFVPTPWAARQFVNHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI SY K GDV+EVK+KS+ +A VLEA Q ERD+P+Y+ + FV Sbjct: 121 VTVNGKKVNIASYTLKPGDVVEVKEKSRNMALVLEAQQSGERDIPDYLELGDRGFSVRFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R P L DVP+ V M+PNLVVE+YS Sbjct: 181 RFPE-LADVPFAVKMEPNLVVEYYS 204 >gi|88861470|ref|ZP_01136096.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2] gi|88816518|gb|EAR26347.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARIKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNG VNI SYR DV+ +++K+K+ A ++ A +LAE R+ P ++ V+ M Sbjct: 119 SHKSVMVNGSVVNIPSYRITADDVVVIREKAKKQARIVAALELAEQREKPTWVEVDGSKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGVFKRLPERSD---LSADINEQLIVELYSK 206 >gi|197287092|ref|YP_002152964.1| 30S ribosomal protein S4 [Proteus mirabilis HI4320] gi|227354912|ref|ZP_03839326.1| 30S ribosomal protein S4 [Proteus mirabilis ATCC 29906] gi|226699106|sp|B4F1K8|RS4_PROMH RecName: Full=30S ribosomal protein S4 gi|194684579|emb|CAR46428.1| 30S ribosomal protein S4 [Proteus mirabilis HI4320] gi|227164994|gb|EEI49833.1| 30S ribosomal protein S4 [Proteus mirabilis ATCC 29906] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAEARQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ V++KSK+ + + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|297172490|gb|ADI23462.1| hypothetical protein [uncultured nuHF1 cluster bacterium HF0770_35I22] Length = 204 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 126/206 (61%), Positives = 162/206 (78%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR +K+KI+RR+G NLWGRPKSPVN R Y PG GQRR+ KPS +GLQL AKQK+K Sbjct: 1 MSKRIKAKYKINRRLGVNLWGRPKSPVNIREYPPGEQGQRRR-KPSDYGLQLMAKQKLKG 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+FR ++EA + RGDTS NL+ LE RLD+++YR KFVPT+F+ARQFVNH H Sbjct: 60 YYGNITEKQFRKYYQEATKRRGDTSENLVGILERRLDSVIYRMKFVPTVFSARQFVNHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNGR+VNI SY K D+I V++KS+Q+ VL A + ERDVPEY++VN M TF+ Sbjct: 120 IMVNGRTVNIPSYVVKVDDIISVREKSRQMPLVLLAMESPERDVPEYLTVNPSKMEGTFL 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS + +PYPV M+PNLV+EFYSR Sbjct: 180 HVPSLAE-IPYPVQMEPNLVIEFYSR 204 >gi|86141165|ref|ZP_01059711.1| 30S ribosomal protein S4 [Leeuwenhoekiella blandensis MED217] gi|85831724|gb|EAQ50179.1| 30S ribosomal protein S4 [Leeuwenhoekiella blandensis MED217] Length = 201 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 125/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL+ KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLQEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E +FR++F++A + G T L+ ESRLD +V+R P+ AARQ V+HR Sbjct: 60 YTYG-ILENQFRNMFEKATSATGITGVVLLQLCESRLDNVVFRMGIAPSRRAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY+ K GDV+ V++KSK L+++ ++ A V E+IS N+D+ TF Sbjct: 119 HITVNGELVNIPSYQLKAGDVVAVREKSKSLSAIQDSLANASH-VYEWISWNNDSKQGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + P + +VE YS+ Sbjct: 178 VSVPER---IQIPENINEQFIVELYSK 201 >gi|319892767|ref|YP_004149642.1| SSU ribosomal protein S4p (S9e) [Staphylococcus pseudintermedius HKU10-03] gi|317162463|gb|ADV06006.1| SSU ribosomal protein S4p (S9e) [Staphylococcus pseudintermedius HKU10-03] gi|323464199|gb|ADX76352.1| ribosomal protein S4 [Staphylococcus pseudintermedius ED99] Length = 200 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K ++ R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSSWKKSRRLGISLSGTGKE-LDKRPYAPGQHGPTQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F+ A + G N + L SRLD IVY T ARQ V H H Sbjct: 60 LYG-MTERQFRNTFQTAGKQGGVHGENFMILLASRLDAIVYALGLARTRRQARQLVGHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V V+G+ V+I SY K G V+ V++KS++LA + E+ ++ VP+Y+ + DN+ TFV Sbjct: 119 VEVDGKRVDIPSYTLKPGQVVTVREKSRKLAIIEESVEI-NNFVPDYLDFDADNLTGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200 >gi|149371654|ref|ZP_01891070.1| 30S ribosomal protein S4 [unidentified eubacterium SCB49] gi|149355281|gb|EDM43841.1| 30S ribosomal protein S4 [unidentified eubacterium SCB49] Length = 201 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIYGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLAEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR++FK+A + G T L+ ESRLD +VYR P+ AARQ V+HR Sbjct: 60 YTYG-ILEKQFRNLFKKATAAPGITGQVLLQLCESRLDNVVYRMGIAPSRPAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY+ K GDV+ V++KSK L ++ ++ + +V E+I+ N + TF Sbjct: 119 HITVNGEKVNIPSYQLKAGDVVAVREKSKSLEAIQDSLANSS-NVYEWITWNSETKQGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V IP L+ P + +VE YS+ Sbjct: 178 VTIPQRLQ---IPENINEQFIVELYSK 201 >gi|260914657|ref|ZP_05921123.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325] gi|260631256|gb|EEX49441.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325] Length = 206 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|293390661|ref|ZP_06634995.1| ribosomal protein S4 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951195|gb|EFE01314.1| ribosomal protein S4 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 206 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ D++ V++KSK+ A + + +LAE ++ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDLVAVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|254483410|ref|ZP_05096639.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2148] gi|214036284|gb|EEB76962.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2148] Length = 206 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCKAEAIPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LESRLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 H+ ++VNG+ VNI SY+ K GDV+ +++K+K+ V A L A+R PE+I VN D + Sbjct: 119 AHKSIMVNGQVVNIASYQVKAGDVVALREKAKKQLRVQSALALAAQRGEPEWIEVNADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + NL+VE YS+ Sbjct: 179 EGTFKSVPDRQD---LSSEINENLIVELYSK 206 >gi|291280122|ref|YP_003496957.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1] gi|290754824|dbj|BAI81201.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1] Length = 208 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + K + Y PG HGQ RK K S +GLQLR Sbjct: 1 MARYTGPVCKLCRREGMKLYLKGERCFKDKCAFEKKGYPPGQHGQMRK-KISDYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E++FR F A R +G T NL+ LE RLD +VYR+ F + ARQ Sbjct: 60 KQKVKRIYGVL-ERQFRRYFDRATRMQGITGENLLQLLERRLDNVVYRSGFARSRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 + H H LVNGR VNI S+ CKEGDV+EVK+KS+ +A++ E+ + AE R +PE+IS++ Sbjct: 119 LIRHNHFLVNGRKVNIPSFLCKEGDVVEVKEKSRDIAAIKESVETAEGRGLPEWISLDKT 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N AT R+P +Q +L+VE YS+ Sbjct: 179 NFKATVNRLPVRSD---INYDVQEHLIVELYSK 208 >gi|254468445|ref|ZP_05081851.1| ribosomal protein S4 [beta proteobacterium KB13] gi|207087255|gb|EDZ64538.1| ribosomal protein S4 [beta proteobacterium KB13] Length = 209 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 119/213 (55%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K K RR GE L+ + K + RSY PG HGQRR + S +G+QLR Sbjct: 1 MARNLDPKCKQCRREGEKLFLKGEKCFTDKCGIEKRSYPPGQHGQRRGGRLSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++K YG I EK+FRS + EADR +G T NL+ LESRLD +VYR + +RQ Sbjct: 61 KQKLRKIYG-ILEKQFRSYYAEADRLKGVTGENLLQLLESRLDNVVYRMGIGVSRSESRQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H + VNG VNI SY+ K GD + V + SK + A++ A ER PE++ V+ Sbjct: 120 LVRHNSITVNGNRVNIPSYQVKPGDQVAVAEASKNQLRIKAATEAADERGFPEWVEVDVK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 KLSGTFKNKPQRDD---LPPTINESLIVELYSK 209 >gi|167855326|ref|ZP_02478094.1| 30S ribosomal protein S4 [Haemophilus parasuis 29755] gi|219871572|ref|YP_002475947.1| 30S ribosomal protein S4 [Haemophilus parasuis SH0165] gi|254764591|sp|B8F6P7|RS4_HAEPS RecName: Full=30S ribosomal protein S4 gi|167853584|gb|EDS24830.1| 30S ribosomal protein S4 [Haemophilus parasuis 29755] gi|219691776|gb|ACL32999.1| 30S ribosomal protein S4 [Haemophilus parasuis SH0165] Length = 206 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DVI V++KSK+ A + + +LA +R+ P ++ V+ M Sbjct: 119 SHKSIVVNGRVVNIPSYQVSVDDVIAVREKSKKQARIKASLELATQREKPTWLEVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + +L+VE YS+ Sbjct: 179 EGVFKRTPERSD---LSADINEHLIVELYSK 206 >gi|228999440|ref|ZP_04159019.1| 30S ribosomal protein S4 [Bacillus mycoides Rock3-17] gi|229006996|ref|ZP_04164624.1| 30S ribosomal protein S4 [Bacillus mycoides Rock1-4] gi|228754235|gb|EEM03652.1| 30S ribosomal protein S4 [Bacillus mycoides Rock1-4] gi|228760385|gb|EEM09352.1| 30S ribosomal protein S4 [Bacillus mycoides Rock3-17] Length = 200 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + ATF Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFYSR Sbjct: 178 RLPERAE---LAAEINEALIVEFYSR 200 >gi|269104036|ref|ZP_06156733.1| SSU ribosomal protein S4p (S9e) [Photobacterium damselae subsp. damselae CIP 102761] gi|268163934|gb|EEZ42430.1| SSU ribosomal protein S4p (S9e) [Photobacterium damselae subsp. damselae CIP 102761] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ ++EA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYQEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ SY+ DV+ +++K+K A + A ++A +R++P ++ V++ M Sbjct: 119 SHKAILVNGQVVNVPSYKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDNKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206 >gi|120553676|ref|YP_958027.1| ribosomal protein S4 [Marinobacter aquaeolei VT8] gi|152060959|sp|A1TYM1|RS4_MARAV RecName: Full=30S ribosomal protein S4 gi|120323525|gb|ABM17840.1| SSU ribosomal protein S4P [Marinobacter aquaeolei VT8] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALDSKCNIETPPGMHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARGKGATGENLLQLLEGRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 +H+ VLVN + VNI SY+ K GDV+ V++K+K V A LA P ++ V+ + M Sbjct: 119 SHKAVLVNDKPVNIPSYQVKPGDVVSVREKAKNQLRVKGALDLASSRAPVSWVEVDANKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P + P + NL+VE YS+ Sbjct: 179 SGVYKSVPERTE---LPADINENLIVELYSK 206 >gi|313677145|ref|YP_004055141.1| SSU ribosomal protein s4p [Marivirga tractuosa DSM 4126] gi|312943843|gb|ADR23033.1| SSU ribosomal protein S4P [Marivirga tractuosa DSM 4126] Length = 201 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K KI RR E ++G K ++ ++Y PG HG+ R+ K S + +QL KQK K Sbjct: 1 MARYKGPKSKIARRFNEPIFGASK-ALSKKAYPPGQHGRGRRRKQSEYAIQLMEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++F +A R +G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFANLFDKASRKKGITGEVLLQLLESRLDNVVFRLGIAPTRRAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG +NI SY+ KE DVI V++KSK L ++ ++ ++ + +M FV Sbjct: 119 ILVNGEILNIPSYQVKESDVIGVREKSKSLEAITDSLSSNTASKYSWLEFDKSSMSGKFV 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P + L+VE YS+ Sbjct: 179 NIPQR---EDIPENINEQLIVELYSK 201 >gi|183600728|ref|ZP_02962221.1| hypothetical protein PROSTU_04324 [Providencia stuartii ATCC 25827] gi|212709003|ref|ZP_03317131.1| hypothetical protein PROVALCAL_00035 [Providencia alcalifaciens DSM 30120] gi|268593565|ref|ZP_06127786.1| ribosomal protein S4 [Providencia rettgeri DSM 1131] gi|188019708|gb|EDU57748.1| hypothetical protein PROSTU_04324 [Providencia stuartii ATCC 25827] gi|212688369|gb|EEB47897.1| hypothetical protein PROVALCAL_00035 [Providencia alcalifaciens DSM 30120] gi|291310842|gb|EFE51295.1| ribosomal protein S4 [Providencia rettgeri DSM 1131] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAEARQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DVI V++K+K+ + + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVISVREKAKKQSRIKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|323488432|ref|ZP_08093679.1| 30S ribosomal protein S4 [Planococcus donghaensis MPA1U2] gi|323397939|gb|EGA90738.1| 30S ribosomal protein S4 [Planococcus donghaensis MPA1U2] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGISLTGTGKE-LEKRPYAPGQHGANQRRKVSEYGLQLQEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F+++F +A + G N + LE+RLD +VYR T ARQ VNH H Sbjct: 60 MYG-VNERQFKTLFNKAGKMPGKHGENFMILLEARLDNVVYRLGLARTRRQARQIVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I S+ K G I ++KS L V EA ++ VPEY++++ D+ TFV Sbjct: 119 ILVDGKRVDIPSFSVKPGQTIAFREKSSNLDVVNEAIEV-NNFVPEYVTIDTDSKTGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VE+YSR Sbjct: 178 RLPERSE---LSAEINEQLIVEYYSR 200 >gi|299535430|ref|ZP_07048752.1| 30S ribosomal protein S4 [Lysinibacillus fusiformis ZC1] gi|298729191|gb|EFI69744.1| 30S ribosomal protein S4 [Lysinibacillus fusiformis ZC1] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGISLSGTGKE-IEKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F A + +G N + LE+RLD +VYR T ARQ VNH H Sbjct: 60 MYG-MNERQFRTLFNRAGKMKGVHGENFMILLETRLDNLVYRLGLARTRRGARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K G I +++KS+ LA V+EA ++ VP+Y++ + D TF Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISLREKSQNLAVVVEAIEV-NNFVPDYLTFDADKKEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VE+YSR Sbjct: 178 RLPERSE---LSAEINEAFIVEYYSR 200 >gi|253995743|ref|YP_003047807.1| 30S ribosomal protein S4 [Methylotenera mobilis JLW8] gi|253982422|gb|ACT47280.1| ribosomal protein S4 [Methylotenera mobilis JLW8] Length = 209 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R++ PG HGQRR + S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKAEKCFTDKCAIEKRNFPPGQHGQRRNQRLSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FRS + EADR +G T NL+ LE RLD + YR + ARQ Sbjct: 61 KQKVRRIYGVL-EGQFRSYYAEADRQKGITGENLLQLLECRLDNVTYRMGLGGSRTEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H +LVNG+ VNI SY+ K GDVI V + SK + A + AE R PE++ V+ Sbjct: 120 IVRHNSILVNGKRVNIPSYQVKAGDVISVAEASKTQLRIKGALEAAEQRGFPEWLDVDVK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P + P + +LVVE YS+ Sbjct: 180 ALKGTFKAKPQRDE---LPPTINESLVVELYSK 209 >gi|83720741|ref|YP_443547.1| 30S ribosomal protein S4 [Burkholderia thailandensis E264] gi|167582598|ref|ZP_02375472.1| 30S ribosomal protein S4 [Burkholderia thailandensis TXDOH] gi|167620712|ref|ZP_02389343.1| 30S ribosomal protein S4 [Burkholderia thailandensis Bt4] gi|257137667|ref|ZP_05585929.1| 30S ribosomal protein S4 [Burkholderia thailandensis E264] gi|123536225|sp|Q2SU52|RS4_BURTA RecName: Full=30S ribosomal protein S4 gi|83654566|gb|ABC38629.1| ribosomal protein S4 [Burkholderia thailandensis E264] Length = 207 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + K GDVI +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVISIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207 >gi|89076300|ref|ZP_01162641.1| 30S ribosomal protein S4 [Photobacterium sp. SKA34] gi|90581702|ref|ZP_01237490.1| 30S ribosomal protein S4 [Vibrio angustum S14] gi|330447013|ref|ZP_08310663.1| ribosomal protein S4 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|89048004|gb|EAR53593.1| 30S ribosomal protein S4 [Photobacterium sp. SKA34] gi|90437117|gb|EAS62320.1| 30S ribosomal protein S4 [Vibrio angustum S14] gi|328491204|dbj|GAA05160.1| ribosomal protein S4 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K A R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRTYGVL-EKQFRNYYKTAARIKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+K A + A ++A +R++P ++ V+ M Sbjct: 119 SHKAILVNGQVVNVPSFKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDSSKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206 >gi|308048015|ref|YP_003911581.1| 30S ribosomal protein S4P [Ferrimonas balearica DSM 9799] gi|307630205|gb|ADN74507.1| SSU ribosomal protein S4P [Ferrimonas balearica DSM 9799] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG R+++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTVPGQHGA-RRARLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLESRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ + VNGR VNI S+ DVI V++K+++ A + A ++AE R+ P ++ V+ M Sbjct: 119 SHKAIKVNGRVVNIPSFSVSPNDVIAVREKAQKQARIKGALEVAEQREKPTWVEVDGAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206 >gi|169632374|ref|YP_001706110.1| 30S ribosomal protein S4 [Acinetobacter baumannii SDF] gi|169794618|ref|YP_001712411.1| 30S ribosomal protein S4 [Acinetobacter baumannii AYE] gi|213158811|ref|YP_002320809.1| ribosomal protein S4 [Acinetobacter baumannii AB0057] gi|215482207|ref|YP_002324389.1| ribosomal protein S4 [Acinetobacter baumannii AB307-0294] gi|239503210|ref|ZP_04662520.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB900] gi|260557051|ref|ZP_05829268.1| ribosomal protein S4 [Acinetobacter baumannii ATCC 19606] gi|293610848|ref|ZP_06693148.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|294839723|ref|ZP_06784406.1| 30S ribosomal protein S4 [Acinetobacter sp. 6013113] gi|294842677|ref|ZP_06787360.1| 30S ribosomal protein S4 [Acinetobacter sp. 6014059] gi|294860401|ref|ZP_06798170.1| 30S ribosomal protein S4 [Acinetobacter sp. 6013150] gi|301345034|ref|ZP_07225775.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB056] gi|301512035|ref|ZP_07237272.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB058] gi|301595208|ref|ZP_07240216.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB059] gi|152060924|sp|A3M960|RS4_ACIBT RecName: Full=30S ribosomal protein S4 gi|226697785|sp|B7GW26|RS4_ACIB3 RecName: Full=30S ribosomal protein S4 gi|226697786|sp|B7IA15|RS4_ACIB5 RecName: Full=30S ribosomal protein S4 gi|226697788|sp|B0VQU2|RS4_ACIBS RecName: Full=30S ribosomal protein S4 gi|226697789|sp|B0V6U6|RS4_ACIBY RecName: Full=30S ribosomal protein S4 gi|169147545|emb|CAM85406.1| 30S ribosomal protein S4 [Acinetobacter baumannii AYE] gi|169151166|emb|CAO99838.1| 30S ribosomal protein S4 [Acinetobacter baumannii] gi|193078463|gb|ABO13454.2| 30S ribosomal protein S4 [Acinetobacter baumannii ATCC 17978] gi|213057971|gb|ACJ42873.1| ribosomal protein S4 [Acinetobacter baumannii AB0057] gi|213986640|gb|ACJ56939.1| ribosomal protein S4 [Acinetobacter baumannii AB307-0294] gi|260409657|gb|EEX02958.1| ribosomal protein S4 [Acinetobacter baumannii ATCC 19606] gi|292827192|gb|EFF85557.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|322509484|gb|ADX04938.1| 30S ribosomal protein S4 [Acinetobacter baumannii 1656-2] gi|323519505|gb|ADX93886.1| 30S ribosomal protein S4 [Acinetobacter baumannii TCDC-AB0715] gi|325123580|gb|ADY83103.1| 30S ribosomal protein S4 [Acinetobacter calcoaceticus PHEA-2] Length = 208 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P +I V+H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIEVDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208 >gi|299768690|ref|YP_003730716.1| 30S ribosomal protein S4 [Acinetobacter sp. DR1] gi|298698778|gb|ADI89343.1| 30S ribosomal protein S4 [Acinetobacter sp. DR1] Length = 208 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P +I V+H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIDVDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRAD---LPAEINESLIVELYSK 208 >gi|242237883|ref|YP_002986064.1| 30S ribosomal protein S4 [Dickeya dadantii Ech703] gi|242129940|gb|ACS84242.1| ribosomal protein S4 [Dickeya dadantii Ech703] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H+ V+VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 GHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|329888167|ref|ZP_08266765.1| ribosomal protein S4 [Brevundimonas diminuta ATCC 11568] gi|328846723|gb|EGF96285.1| ribosomal protein S4 [Brevundimonas diminuta ATCC 11568] Length = 205 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 134/205 (65%), Positives = 165/205 (80%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DR +GENLWGR KSPVN RSYGPG HGQRRKSK S FGLQL+AKQK+K Sbjct: 1 MSKRHSAKYKLDRAMGENLWGRAKSPVNKRSYGPGQHGQRRKSKVSDFGLQLKAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+EK+F + + EA R +G+TS NLI LESRLD IVYRAKFVPT++AARQFV+H H Sbjct: 61 YYGNITEKQFAATYAEAARRKGNTSENLIGLLESRLDAIVYRAKFVPTVWAARQFVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+IGSYR K GDV+EVK+KS+ +A VLEA Q +ERD+P+Y+ + + Sbjct: 121 VTVNGKKVDIGSYRVKVGDVVEVKEKSRNMALVLEAQQSSERDLPDYLELGDRGFSVRYG 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R+P L DVPYPV M+PNLVVE+YS Sbjct: 181 RVPE-LSDVPYPVKMEPNLVVEYYS 204 >gi|300721390|ref|YP_003710661.1| 30S ribosomal subunit protein S4 [Xenorhabdus nematophila ATCC 19061] gi|297627878|emb|CBJ88424.1| 30S ribosomal subunit protein S4 [Xenorhabdus nematophila ATCC 19061] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LESRLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLNLLESRLDNVVYRMGFGATRAESRQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ + VNGR VNI SY+ DV+ V++K+K+ A + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAITVNGRVVNIASYQVSPNDVVSVREKAKKQARIKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|109897338|ref|YP_660593.1| 30S ribosomal protein S4 [Pseudoalteromonas atlantica T6c] gi|122972198|sp|Q15X49|RS4_PSEA6 RecName: Full=30S ribosomal protein S4 gi|109699619|gb|ABG39539.1| SSU ribosomal protein S4P [Pseudoalteromonas atlantica T6c] gi|332175075|gb|AEE24329.1| ribosomal protein S4 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRIGFASTRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S+ DV+ V++K+K+ A ++ A +LAE R+ P +I V+ M Sbjct: 119 SHKAILVNGQVVNVPSFNVSADDVVSVREKAKKQARIVSALELAEQREKPTWIEVDSKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRVPERTD---LSAEINEQLIVELYSK 206 >gi|222151637|ref|YP_002560793.1| 30S ribosomal protein S4 [Macrococcus caseolyticus JCSC5402] gi|254764595|sp|B9E7C9|RS4_MACCJ RecName: Full=30S ribosomal protein S4 gi|222120762|dbj|BAH18097.1| 30S ribosomal protein S4 [Macrococcus caseolyticus JCSC5402] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARFTGSTWKKSRRLGISLSGTGKE-LERRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E++FR+IF A + +G N ++ L SRLD +VY+ T ARQ VNH H Sbjct: 60 MYG-INERQFRTIFDRAGKMKGIHGANFMALLASRLDAVVYQLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SY+ K G VI V++KS++L + E+ +L+ VPEY++ + D + TFV Sbjct: 119 IMVDGARVDIPSYQLKPGQVISVREKSQKLNIIAESVELSNH-VPEYLTFDADKLEGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VE+YSR Sbjct: 178 RVPERSE---LSAEINEQLIVEYYSR 200 >gi|330827906|ref|YP_004390858.1| 30S ribosomal protein S4 [Aeromonas veronii B565] gi|328803042|gb|AEB48241.1| 30S ribosomal protein S4 [Aeromonas veronii B565] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYIGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKARLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +++A R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DVI V++K+K+ A + + ++A +R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIPSFQVSPEDVICVREKAKKQARIKASLEVAGQREKPTWVEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206 >gi|294012169|ref|YP_003545629.1| ribosomal protein S4 [Sphingobium japonicum UT26S] gi|292675499|dbj|BAI97017.1| ribosomal protein S4 [Sphingobium japonicum UT26S] Length = 204 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 123/206 (59%), Positives = 157/206 (76%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K Sbjct: 1 MSKRSSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGDI+EK+F+ + EA R +GDT NLI LE RLD +VYRAKF PTI+++RQ V+H H Sbjct: 61 YYGDITEKQFKKNYTEAARMKGDTGQNLIGLLERRLDAVVYRAKFAPTIWSSRQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG NI S K GD I + +K++++A VLEA L ERD+P+Y+ + T+V Sbjct: 121 IYVNGVKCNIASRLVKPGDEITLGKKAQEMALVLEAQGLPERDIPDYVVADGAA-KVTYV 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVPT-LDEVPYPVKMEPNLVVEFYSR 204 >gi|251787995|ref|YP_003002716.1| 30S ribosomal protein S4 [Dickeya zeae Ech1591] gi|247536616|gb|ACT05237.1| ribosomal protein S4 [Dickeya zeae Ech1591] Length = 206 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|254785103|ref|YP_003072531.1| ribosomal protein S4 [Teredinibacter turnerae T7901] gi|259495299|sp|C5BQ85|RS4_TERTT RecName: Full=30S ribosomal protein S4 gi|237687392|gb|ACR14656.1| ribosomal protein S4 [Teredinibacter turnerae T7901] Length = 206 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 87/211 (41%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + P+ ++ PG HGQ R+ + S +G+QLR KQ Sbjct: 1 MARYLGPTCKLSRREGTDLFLKSGVRPLESKCKAETAPGQHGQ-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FRS +KEA R +G T NL+ LESRLD +VYR F T +RQ V Sbjct: 60 KVRRTYG-LLEKQFRSYYKEAARLKGATGENLLKLLESRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ +LVNG+++NI SY+ EGDVI V++KSK + A + A+R E++ VN D Sbjct: 119 SHKAILVNGKALNIPSYQVSEGDVIAVREKSKNQLRIQNALGIAAQRPDVEWVDVNADKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P V P + NL+VE YS+ Sbjct: 179 EGTFKRVPDR---VDLPADINENLIVELYSK 206 >gi|288801124|ref|ZP_06406580.1| ribosomal protein S4 [Prevotella sp. oral taxon 299 str. F0039] gi|288332058|gb|EFC70540.1| ribosomal protein S4 [Prevotella sp. oral taxon 299 str. F0039] Length = 201 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRKKMSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNLFEKAAKASGITGEVLLQLLESRLDNVVFRMGLAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SY K G VI V++K+K L + A +I ++ F+ Sbjct: 119 IIVDGSVVNIPSYSVKPGQVIGVREKAKSLEVIETALAGFNHSKYPWIEWDNATKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HTPERAD---IPENIKEQLIVELYSK 201 >gi|262277060|ref|ZP_06054853.1| ribosomal protein S4 [alpha proteobacterium HIMB114] gi|262224163|gb|EEY74622.1| ribosomal protein S4 [alpha proteobacterium HIMB114] Length = 205 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 120/206 (58%), Positives = 161/206 (78%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR SKHK+DRR+G N+WGRPKSP N+R+YGPG HGQR +KPS + +QL+AKQK+K Sbjct: 1 MTKRIKSKHKVDRRLGTNIWGRPKSPFNSRAYGPGQHGQRSSAKPSDYKVQLQAKQKLKN 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+++E++FR++++EADR RG+T NL+ LESRLD ++YRAKF T+F ARQ +NH H Sbjct: 61 YYGNLNERQFRNLYREADRRRGNTGENLVGLLESRLDAVIYRAKFATTVFQARQLINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI S++ + D +E+K+ SKQLA VL ++QL ERDVPEYI +H M A Sbjct: 121 VKVNGKRVNISSFKLNDKDEVEIKESSKQLAYVLASTQLKERDVPEYIFADHKKMTAKLA 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P ++PYP IM+PNLVVE+YSR Sbjct: 181 RVP-KFDEIPYPAIMEPNLVVEYYSR 205 >gi|23099660|ref|NP_693126.1| 30S ribosomal protein S4 [Oceanobacillus iheyensis HTE831] gi|26399359|sp|P59130|RS4_OCEIH RecName: Full=30S ribosomal protein S4 gi|22777890|dbj|BAC14161.1| 30S ribosomal protein S4 [Oceanobacillus iheyensis HTE831] Length = 200 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K ++ R Y PG HG ++ K S +GLQ++ KQK++ Sbjct: 1 MARYTGSVWKKSRRLGISLTGTGKE-LDKRPYAPGQHGPNQRRKLSEYGLQMQEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + +G N + LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-LNERQFRTLFDKAGKMKGIHGENFMILLESRLDNLVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V V+G V+I SY K G VI +++KSK L V EA + A VPEY S + D M ++ Sbjct: 119 VTVDGGRVDIPSYAIKPGQVIGLREKSKNLDVVKEALE-ANSFVPEYTSFDADKMEGSYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VEFYSR Sbjct: 178 RFPERSE---LPAEINEQLIVEFYSR 200 >gi|260061922|ref|YP_003195002.1| 30S ribosomal protein S4 [Robiginitalea biformata HTCC2501] gi|88786055|gb|EAR17224.1| 30S ribosomal protein S4 [Robiginitalea biformata HTCC2501] Length = 201 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G K ++Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKSKIARKFGEAIFGDDK-AFEKKNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR++F +A+RS+G T L+ ESRLD +VYR P+ AARQ V+HR Sbjct: 60 YTYG-ILERQFRNLFAQANRSKGVTGEVLLQLCESRLDNVVYRMGIAPSRRAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY GDV+ V++KSK L ++ ++ +V E+IS N D TF Sbjct: 119 HITVNGELVNIPSYSLSAGDVVGVREKSKSLQAIEDSLS-NHSNVYEWISWNSDKKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P L+ P ++ L+VE YS+ Sbjct: 178 VAVPERLQ---IPENIKEQLIVELYSK 201 >gi|239818004|ref|YP_002946914.1| 30S ribosomal protein S4 [Variovorax paradoxus S110] gi|319796381|ref|YP_004158021.1| ribosomal protein s4 [Variovorax paradoxus EPS] gi|259495303|sp|C5CQ76|RS4_VARPS RecName: Full=30S ribosomal protein S4 gi|239804581|gb|ACS21648.1| ribosomal protein S4 [Variovorax paradoxus S110] gi|315598844|gb|ADU39910.1| ribosomal protein S4 [Variovorax paradoxus EPS] Length = 207 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ + S +GLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIQDKAKFDSK---PGQHGRTSGQRTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+EADR RG+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEEADRRRGNTGANLLFILESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GDVI V+ KSK+ + EA QLA++ +P ++ VN Sbjct: 117 QLVSHKAITVNGQSVNIPSYLVKTGDVIAVRDKSKKQTRIAEALQLAQQVGIPAWVEVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D TF ++P + + + +L+VE YSR Sbjct: 177 DKAEGTFKKVPDRDE---FAADINESLIVELYSR 207 >gi|260549816|ref|ZP_05824032.1| ribosomal protein S4 [Acinetobacter sp. RUH2624] gi|260407066|gb|EEX00543.1| ribosomal protein S4 [Acinetobacter sp. RUH2624] Length = 208 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P +I V+H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIDVDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208 >gi|271502222|ref|YP_003335248.1| 30S ribosomal protein S4 [Dickeya dadantii Ech586] gi|270345777|gb|ACZ78542.1| ribosomal protein S4 [Dickeya dadantii Ech586] Length = 206 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ VLVNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAVLVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|261867278|ref|YP_003255200.1| 30S ribosomal protein S4 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412610|gb|ACX81981.1| hypothetical protein D11S_0571 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 206 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDIAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD IVYR F T ARQ V Sbjct: 60 KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNIVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE ++ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + +L+VE YS+ Sbjct: 179 EGVLKRVPERSD---LSADINEHLIVELYSK 206 >gi|184159574|ref|YP_001847913.1| 30S ribosomal protein S4 [Acinetobacter baumannii ACICU] gi|226697787|sp|B2HZ84|RS4_ACIBC RecName: Full=30S ribosomal protein S4 gi|183211168|gb|ACC58566.1| 30S ribosomal protein S4 [Acinetobacter baumannii ACICU] Length = 208 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P +I V+H Sbjct: 120 VSHRSITLNGRRVNIASIQVKSGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIEVDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208 >gi|161523454|ref|YP_001578466.1| 30S ribosomal protein S4 [Burkholderia multivorans ATCC 17616] gi|189351773|ref|YP_001947401.1| 30S ribosomal protein S4 [Burkholderia multivorans ATCC 17616] gi|221201590|ref|ZP_03574628.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2M] gi|221207335|ref|ZP_03580345.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2] gi|221213473|ref|ZP_03586448.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD1] gi|226697816|sp|A9ADL8|RS4_BURM1 RecName: Full=30S ribosomal protein S4 gi|160340883|gb|ABX13969.1| ribosomal protein S4 [Burkholderia multivorans ATCC 17616] gi|189335795|dbj|BAG44865.1| small subunit ribosomal protein S4 [Burkholderia multivorans ATCC 17616] gi|221166925|gb|EED99396.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD1] gi|221172923|gb|EEE05360.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2] gi|221178406|gb|EEE10815.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2M] Length = 207 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GDVI +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKSITVNGIVANVPSQQVKAGDVIAIREKAKKQARIIEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IGGDINESLIVELYSR 207 >gi|254253495|ref|ZP_04946813.1| Ribosomal protein S4 [Burkholderia dolosa AUO158] gi|124896104|gb|EAY69984.1| Ribosomal protein S4 [Burkholderia dolosa AUO158] Length = 207 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + K GDVI +++K+K+ A ++E+ LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVIAIREKAKKQARIVESLSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207 >gi|313680488|ref|YP_004058227.1| SSU ribosomal protein s4p [Oceanithermus profundus DSM 14977] gi|313153203|gb|ADR37054.1| SSU ribosomal protein S4P [Oceanithermus profundus DSM 14977] Length = 209 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + PK + R Y PG HGQRR +PS + ++LR Sbjct: 1 MGRYIGPVCRLCRREGVKLYLKGDRCYSPKCAIERRPYAPGQHGQRRARRPSDYAVRLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQKM++ YG ISEK+FR++F+EA + +G T + LESRLD +VYR + ARQ Sbjct: 61 KQKMRRIYG-ISEKQFRNLFEEASKKKGVTGTVFLRLLESRLDNVVYRLGIASSRKQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+ V GR V + SYR + GDVI V + K++ ++ ++ A+ R ++ + + Sbjct: 120 LVRHGHIAVGGRKVTVPSYRVRPGDVIAVTEAGKKIGAIQANAEAAKGRKTGPWLEFDPE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 MV F+R+P +D+ PV LV+E+YSR Sbjct: 180 KMVGKFLRLPER-EDLALPV--NEQLVIEYYSR 209 >gi|145300911|ref|YP_001143752.1| ribosomal protein S4 [Aeromonas salmonicida subsp. salmonicida A449] gi|152060929|sp|A4SSY2|RS4_AERS4 RecName: Full=30S ribosomal protein S4 gi|142853683|gb|ABO92004.1| ribosomal protein S4 [Aeromonas salmonicida subsp. salmonicida A449] Length = 206 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYIGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKARLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +++A R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++K+K+ A + + ++A +R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIPSFQVSPEDVVCVREKAKKQARIKASLEVAGQREKPTWVEVDTAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206 >gi|225011671|ref|ZP_03702109.1| ribosomal protein S4 [Flavobacteria bacterium MS024-2A] gi|225004174|gb|EEG42146.1| ribosomal protein S4 [Flavobacteria bacterium MS024-2A] Length = 201 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEPIFGDDKS-FEKRNYPPGQHGNARRRGKKSEYAVQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR++F++A R++G T L+ ESRLD +VYR PT ARQ V+HR Sbjct: 60 FTYG-ILERQFRNLFEKASRNKGVTGEVLLQLCESRLDNVVYRLGLSPTRSGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ +NG +NI SY+ K GDV+ V++KSK L ++EA + + E++S N + + TF Sbjct: 119 HITINGSILNIPSYQVKVGDVVGVREKSKSLNVIIEA-KGKDASAYEWLSWNKEQLQGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V IP L+ P ++ L+VE YS+ Sbjct: 178 VSIPERLQ---IPENIKEQLIVELYSK 201 >gi|167629495|ref|YP_001679994.1| 30S ribosomal protein s4 [Heliobacterium modesticaldum Ice1] gi|226699071|sp|B0TC84|RS4_HELMI RecName: Full=30S ribosomal protein S4 gi|167592235|gb|ABZ83983.1| 30S ribosomal protein s4 [Heliobacterium modesticaldum Ice1] Length = 208 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K V+ R+Y PG HGQ RK Y GLQLR Sbjct: 1 MARYTGPVCRLCRREGAKLYLKGERCYTGKCAVDRRTYAPGQHGQGRKKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR+ F EADR +G T NL+ LE+RLD +V+R F + ARQ Sbjct: 60 KQKARRVYG-ILEGQFRAYFAEADRQQGVTGENLLRLLETRLDNVVFRLGFARSRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 FV H H +NG+ VNI S + + GDVI++K+KSK E L ++ P ++ ++ + Sbjct: 119 FVLHNHFTLNGKKVNIPSIQLRVGDVIQLKEKSKDTPLFKEIVDGLGQKTPPAWLELDVN 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P +Q +L+VE YSR Sbjct: 179 TLSGRVIALPKR---EDIDTNLQEHLIVELYSR 208 >gi|186477562|ref|YP_001859032.1| 30S ribosomal protein S4 [Burkholderia phymatum STM815] gi|226697817|sp|B2JI40|RS4_BURP8 RecName: Full=30S ribosomal protein S4 gi|184194021|gb|ACC71986.1| ribosomal protein S4 [Burkholderia phymatum STM815] Length = 207 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLKLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + K GDVI V++++K+ A +LEA LAE+ +P++++V+ Sbjct: 117 QLVSHKAITVNGVVANIPSLQVKAGDVIAVREQAKKQARILEALSLAEQGGLPQWVAVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + +L+VE YSR Sbjct: 177 KKFEGTFKSMPERSD---IAGDINESLIVELYSR 207 >gi|90414980|ref|ZP_01222942.1| 30S ribosomal protein S4 [Photobacterium profundum 3TCK] gi|161936335|ref|YP_128585.2| 30S ribosomal protein S4 [Photobacterium profundum SS9] gi|152031675|sp|Q6LV92|RS4_PHOPR RecName: Full=30S ribosomal protein S4 gi|90323919|gb|EAS40519.1| 30S ribosomal protein S4 [Photobacterium profundum 3TCK] Length = 206 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRTYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVNG VN+ S++ DV+ +++K+K A + A ++A +R++P ++ V++ + Sbjct: 119 SHKAILVNGTVVNVPSFKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDNSKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206 >gi|118595311|ref|ZP_01552658.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181] gi|118441089|gb|EAV47716.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181] Length = 209 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R+Y PG HGQRR S+ S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIEKRNYPPGQHGQRRASRLSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+FR + EADR +G T NL+ LESRLD +VY+ + +RQ Sbjct: 61 KQKLRRMYGVL-EKQFRGYYAEADRRKGITGENLLQLLESRLDNVVYKMGLGASRTESRQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H +LVNG+ VNI S++ GD + V + +K + A + A ER PE++ V+ Sbjct: 120 IVKHNAILVNGKRVNIPSFQVSPGDEVSVVESAKSQLRIKGAIEAAVERGFPEWLEVDSK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F P P + +LVVE YS+ Sbjct: 180 AFKGVFKNKPQRDD---LPSTINESLVVELYSK 209 >gi|325269509|ref|ZP_08136125.1| 30S ribosomal protein S4 [Prevotella multiformis DSM 16608] gi|324988128|gb|EGC20095.1| 30S ribosomal protein S4 [Prevotella multiformis DSM 16608] Length = 202 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K + R++ PG HG R+ K S +G QL KQK K Sbjct: 1 MARYIGPKSRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F +A ++ G T L+ LESRLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-ERQFRNLFDKAAKADGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNG VNI SY+ K GDV+ V++K+K L + A ++ + + F+ Sbjct: 119 IVVNGNVVNIASYQVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENGKCGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201 >gi|228993388|ref|ZP_04153304.1| 30S ribosomal protein S4 [Bacillus pseudomycoides DSM 12442] gi|228766456|gb|EEM15099.1| 30S ribosomal protein S4 [Bacillus pseudomycoides DSM 12442] Length = 200 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + ATF Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLAATFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFYSR Sbjct: 178 RLPERAE---LAAEINEALIVEFYSR 200 >gi|218294781|ref|ZP_03495635.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23] gi|218244689|gb|EED11213.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23] Length = 209 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + PK + R Y PG HGQRR +PS + ++LR Sbjct: 1 MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQRRARRPSDYAVRLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG ISE +FR++F+EA R +G T L+ LESRLD +VYR F + ARQ Sbjct: 61 KQKLRRIYG-ISETQFRNLFEEASRKKGVTGTVLLGLLESRLDNVVYRLGFAQSRRQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+ VNGR V++ +YR K GD I + ++S+ L + E + + R V ++S++ + Sbjct: 120 MVRHGHITVNGRRVDLPAYRVKPGDEIAIAERSRNLTFIRENLEAMKGRKVGPWLSLDVE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F+R+P +D+ PV LV+EFYSR Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVIEFYSR 209 >gi|296163296|ref|ZP_06846057.1| ribosomal protein S4 [Burkholderia sp. Ch1-1] gi|295886435|gb|EFG66292.1| ribosomal protein S4 [Burkholderia sp. Ch1-1] Length = 207 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + K GDV+ V+++ K+ A +LEA LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGVVSNIPSMQVKAGDVVAVREQKKKQARILEALSLAEQGGLPSWVAVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + +L+VE YSR Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207 >gi|218131301|ref|ZP_03460105.1| hypothetical protein BACEGG_02912 [Bacteroides eggerthii DSM 20697] gi|317476331|ref|ZP_07935580.1| ribosomal protein S4 [Bacteroides eggerthii 1_2_48FAA] gi|217986518|gb|EEC52854.1| hypothetical protein BACEGG_02912 [Bacteroides eggerthii DSM 20697] gi|316907357|gb|EFV29062.1| ribosomal protein S4 [Bacteroides eggerthii 1_2_48FAA] Length = 201 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V+++SK L + + ++ + + V + Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNAKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|322418390|ref|YP_004197613.1| 30S ribosomal protein S4 [Geobacter sp. M18] gi|320124777|gb|ADW12337.1| ribosomal protein S4 [Geobacter sp. M18] Length = 208 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K + RSY PG HGQ R K S +G+QLR Sbjct: 1 MARYTGPSCRLCRREGSELFLKGERCYTDKCAIKRRSYPPGQHGQGR-IKVSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR F+ ADR +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKVRRIYG-ILENQFRGYFESADRMKGVTGENLLFLLERRLDNVVYRLGFATSRDEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NGR NI S + K GDVI++++KS+++A + E+ + R +P+++ ++ D Sbjct: 119 LVRHSHFTLNGRKANIPSIQVKAGDVIQLREKSRKIAVITESLEAVVRRGIPQWLELDKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P +D+ P +Q L+VE YS+ Sbjct: 179 AFKGTVKTSPVR-EDITMP--IQEQLIVELYSK 208 >gi|325529703|gb|EGD06566.1| 30S ribosomal protein S4 [Burkholderia sp. TJI49] Length = 207 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GDVI +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKSITVNGIVANVPSQQVKAGDVIAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207 >gi|261346911|ref|ZP_05974555.1| ribosomal protein S4 [Providencia rustigianii DSM 4541] gi|282564977|gb|EFB70512.1| ribosomal protein S4 [Providencia rustigianii DSM 4541] Length = 206 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAEARQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DVI V++K+K+ + + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVISVREKAKKQSRIKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRMPERTD---LSADINEHLIVELYSK 206 >gi|221133739|ref|ZP_03560044.1| 30S ribosomal protein S4 [Glaciecola sp. HTCC2999] Length = 206 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLDTAPGQHGA-RRGRLSDYGIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ + VNG+ VNI S++ + V++K+K+ A ++ A +LA +R+ P +I V+ + Sbjct: 119 SHKAICVNGQVVNIPSFKVSAETNVSVREKAKKQARIISAVELADQREKPTWIEVDGAKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 SGDFKRLPERSD---LSAEINEQLIVELYSK 206 >gi|167764347|ref|ZP_02436472.1| hypothetical protein BACSTE_02731 [Bacteroides stercoris ATCC 43183] gi|167697752|gb|EDS14331.1| hypothetical protein BACSTE_02731 [Bacteroides stercoris ATCC 43183] Length = 201 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V+++SK L + + ++ + + V + Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNAKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ +L+VE YS+ Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201 >gi|120437150|ref|YP_862836.1| 30S ribosomal protein S4 [Gramella forsetii KT0803] gi|152060951|sp|A0M574|RS4_GRAFK RecName: Full=30S ribosomal protein S4 gi|117579300|emb|CAL67769.1| 30S ribosomal protein S4 [Gramella forsetii KT0803] Length = 201 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 90/207 (43%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR++F++A R++G T L+ ESRLD +VYR P+ AARQ V HR Sbjct: 60 YTYG-ILERQFRNMFEKATRAQGITGEVLLQLCESRLDNVVYRMGVAPSRRAARQLVGHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK LA V E+ V E+IS N + TF Sbjct: 119 HITVNGELVNIPSYHLKAGDVVGVREKSKSLAVVQESLS-NNSSVYEWISWNSEKKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P V P + +VE YS+ Sbjct: 178 VAVPGR---VQIPENINEQFIVELYSK 201 >gi|329962292|ref|ZP_08300298.1| ribosomal protein S4 [Bacteroides fluxus YIT 12057] gi|328530400|gb|EGF57277.1| ribosomal protein S4 [Bacteroides fluxus YIT 12057] Length = 201 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A+ ++G T L+ LE RLD IV+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG VN+ SY K G VI V+++SK L + + ++ + ++ V + Sbjct: 119 ITVNGEVVNVPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ +L+VE YS+ Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201 >gi|154687087|ref|YP_001422248.1| 30S ribosomal protein S4 [Bacillus amyloliquefaciens FZB42] gi|308174649|ref|YP_003921354.1| 30S ribosomal protein S4 (BS4) [Bacillus amyloliquefaciens DSM 7] gi|171855002|sp|A7Z7P1|RS4_BACA2 RecName: Full=30S ribosomal protein S4 gi|154352938|gb|ABS75017.1| RpsD [Bacillus amyloliquefaciens FZB42] gi|307607513|emb|CBI43884.1| ribosomal protein S4 (BS4) [Bacillus amyloliquefaciens DSM 7] gi|328554576|gb|AEB25068.1| 30S ribosomal protein S4 [Bacillus amyloliquefaciens TA208] gi|328912981|gb|AEB64577.1| 30S ribosomal protein S4 [Bacillus amyloliquefaciens LL3] Length = 200 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 123/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + L++RLD +VY+ T ARQ VNH H Sbjct: 60 MYG-VNERQFRTLFDKAAKMTGKHGENFMILLDARLDNVVYKLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I SY+ K G I V++KS+ L+ + E+ ++ VPEY++ + + + TF Sbjct: 119 ILVDGSRVDIPSYQVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200 >gi|107024278|ref|YP_622605.1| 30S ribosomal protein S4 [Burkholderia cenocepacia AU 1054] gi|116688397|ref|YP_834020.1| 30S ribosomal protein S4 [Burkholderia cenocepacia HI2424] gi|170731707|ref|YP_001763654.1| 30S ribosomal protein S4 [Burkholderia cenocepacia MC0-3] gi|206558666|ref|YP_002229426.1| 30S ribosomal protein S4 [Burkholderia cenocepacia J2315] gi|254246578|ref|ZP_04939899.1| Ribosomal protein S4 [Burkholderia cenocepacia PC184] gi|123371103|sp|Q1BRX3|RS4_BURCA RecName: Full=30S ribosomal protein S4 gi|152060938|sp|A0K3Q0|RS4_BURCH RecName: Full=30S ribosomal protein S4 gi|226697814|sp|B1JU47|RS4_BURCC RecName: Full=30S ribosomal protein S4 gi|226697815|sp|B4E5E5|RS4_BURCJ RecName: Full=30S ribosomal protein S4 gi|105894467|gb|ABF77632.1| SSU ribosomal protein S4P [Burkholderia cenocepacia AU 1054] gi|116646486|gb|ABK07127.1| SSU ribosomal protein S4P [Burkholderia cenocepacia HI2424] gi|124871354|gb|EAY63070.1| Ribosomal protein S4 [Burkholderia cenocepacia PC184] gi|169814949|gb|ACA89532.1| ribosomal protein S4 [Burkholderia cenocepacia MC0-3] gi|198034703|emb|CAR50570.1| 30S ribosomal protein S4 [Burkholderia cenocepacia J2315] Length = 207 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GDV+ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + + +L+VE YSR Sbjct: 177 KKFEGTFKQMPERAE---IAGDINESLIVELYSR 207 >gi|330815273|ref|YP_004358978.1| 30S ribosomal protein S4 [Burkholderia gladioli BSR3] gi|327367666|gb|AEA59022.1| 30S ribosomal protein S4 [Burkholderia gladioli BSR3] Length = 207 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V H+ + VNG NI S + K GD+I +++KSK+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVGHKAITVNGIVSNIPSLQVKAGDIIAIREKSKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAE---IAGDINESLIVELYSR 207 >gi|91785440|ref|YP_560646.1| 30S ribosomal protein S4 [Burkholderia xenovorans LB400] gi|123358404|sp|Q13TJ5|RS4_BURXL RecName: Full=30S ribosomal protein S4 gi|91689394|gb|ABE32594.1| SSU ribosomal protein S4P [Burkholderia xenovorans LB400] Length = 207 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ ++VNG NI S + K GDV+ V+++ K+ A +LEA LAE+ +P +++V+ Sbjct: 117 QLVSHKAIMVNGVVSNIPSMQVKAGDVVAVREQKKKQARILEALSLAEQGGLPSWVAVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + +L+VE YSR Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207 >gi|262373497|ref|ZP_06066775.1| ribosomal protein S4 [Acinetobacter junii SH205] gi|262311250|gb|EEY92336.1| ribosomal protein S4 [Acinetobacter junii SH205] Length = 208 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P ++ V+H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMEVDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208 >gi|220935468|ref|YP_002514367.1| 30S ribosomal protein S4 [Thioalkalivibrio sp. HL-EbGR7] gi|254764620|sp|B8GV34|RS4_THISH RecName: Full=30S ribosomal protein S4 gi|219996778|gb|ACL73380.1| 30S ribosomal protein S4 [Thioalkalivibrio sp. HL-EbGR7] Length = 206 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++T+ PG HG R+++ S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKGRGRSLDTKCKLDKAPGQHG-DRRARLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +K A R +G T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KLRRIYGVL-ERQFRNYYKTASRMKGSTGENLLQLLERRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ + DV+ V++K+K+ + ++ LAE+ PE++ V+ M Sbjct: 119 SHKAIQVNGQAVNIASYQVQPSDVVAVREKAKKQVRIQDSLTLAEQFGFPEWVEVDTKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F IP + P + +LVVE YS+ Sbjct: 179 EGVFKSIPERSE---LPAEINESLVVELYSK 206 >gi|170718273|ref|YP_001785291.1| 30S ribosomal protein S4 [Haemophilus somnus 2336] gi|189045384|sp|B0UX38|RS4_HAES2 RecName: Full=30S ribosomal protein S4 gi|168826402|gb|ACA31773.1| ribosomal protein S4 [Haemophilus somnus 2336] Length = 206 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVEAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|157693366|ref|YP_001487828.1| 30S ribosomal protein S4 [Bacillus pumilus SAFR-032] gi|172046056|sp|A8FGA1|RS4_BACP2 RecName: Full=30S ribosomal protein S4 gi|157682124|gb|ABV63268.1| ribosomal protein S4 [Bacillus pumilus SAFR-032] Length = 200 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKISRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + LE+RLD +VYR T ARQ VNH H Sbjct: 60 MYG-VNERQFRTLFDKAAKLPGKQGENFMILLETRLDNLVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I S+ K G I +++KS+ LA V E+ ++ VPEY++ + + + TF Sbjct: 119 ILVDGSRVDIPSFSVKPGQTIALREKSQNLAVVKESVEV-NSFVPEYLTFDAEKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSELAP---EISEQLIVEFYSR 200 >gi|156932259|ref|YP_001436175.1| 30S ribosomal protein S4 [Cronobacter sakazakii ATCC BAA-894] gi|260599616|ref|YP_003212187.1| 30S ribosomal protein S4 [Cronobacter turicensis z3032] gi|171769807|sp|A7MPF7|RS4_ENTS8 RecName: Full=30S ribosomal protein S4 gi|156530513|gb|ABU75339.1| hypothetical protein ESA_00030 [Cronobacter sakazakii ATCC BAA-894] gi|260218793|emb|CBA34141.1| 30S ribosomal protein S4 [Cronobacter turicensis z3032] Length = 206 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ V++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRKPERTD---LSADINEHLIVELYSK 206 >gi|134096297|ref|YP_001101372.1| 30S ribosomal protein S4 [Herminiimonas arsenicoxydans] gi|172044175|sp|A4G9R4|RS4_HERAR RecName: Full=30S ribosomal protein S4 gi|133740200|emb|CAL63251.1| 30S ribosomal subunit protein S4 [Herminiimonas arsenicoxydans] Length = 207 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +G QLR KQ Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG I E++FR F EADR +G+T L+ LE+RLD +VYR F T RQ V Sbjct: 61 KVKRMYG-ILERQFRRYFAEADRRKGNTGETLLKLLETRLDNVVYRMGFGSTRAEGRQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ VNG VNI SY+ K GD++ V++KSK+ ++EA LAE+ +P +++V+ M Sbjct: 120 SHKAFTVNGIVVNIASYQVKPGDIVAVREKSKKQVRIVEALSLAEQIGMPSWVAVDSKKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + + +L+VE YSR Sbjct: 180 EGTFKSVPDRSE---IAADVNESLIVELYSR 207 >gi|126651345|ref|ZP_01723552.1| 30S ribosomal protein S4 [Bacillus sp. B14905] gi|169829591|ref|YP_001699749.1| 30S ribosomal protein S4 [Lysinibacillus sphaericus C3-41] gi|226699085|sp|B1HX43|RS4_LYSSC RecName: Full=30S ribosomal protein S4 gi|126591874|gb|EAZ85957.1| 30S ribosomal protein S4 [Bacillus sp. B14905] gi|168994079|gb|ACA41619.1| 30S ribosomal protein S4 [Lysinibacillus sphaericus C3-41] Length = 200 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGISLSGTGKE-IEKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F A + +G N + LE+RLD +VYR T ARQ VNH H Sbjct: 60 MYG-MNERQFRTLFNRAGKMKGVHGENFMILLETRLDNLVYRLGLARTRRGARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I S+ K G I +++KS+ LA V EA ++ VP+Y++ + D TF Sbjct: 119 ILVDGKRVDIPSFSVKPGQTISLREKSQNLAVVGEAIEV-NNFVPDYLTFDADKKEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + + +VE+YSR Sbjct: 178 RLPERSE---LSAEINESFIVEYYSR 200 >gi|117618638|ref|YP_854866.1| ribosomal protein S4 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|152060928|sp|A0KF44|RS4_AERHH RecName: Full=30S ribosomal protein S4 gi|117560045|gb|ABK36993.1| ribosomal protein S4 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 206 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYIGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTVPGQHGA-RKARLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +++A R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DVI V++K+K+ A + + ++A +R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIPSFQVSPEDVICVREKAKKQARIKASLEVAGQREKPTWVEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206 >gi|113869406|ref|YP_727895.1| 30S ribosomal protein S4 [Ralstonia eutropha H16] gi|123032616|sp|Q0K644|RS4_RALEH RecName: Full=30S ribosomal protein S4 gi|113528182|emb|CAJ94527.1| SSU ribosomal protein S4 [Ralstonia eutropha H16] Length = 207 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDV+ ++++SK+ + EA LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQTLNVPSAQIKSGDVVTIREQSKKQVRIAEALSLAEQSGFPTWVAVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPDRAD---ISGDINESLIVELYSR 207 >gi|121592837|ref|YP_984733.1| 30S ribosomal protein S4 [Acidovorax sp. JS42] gi|152060926|sp|A1W332|RS4_ACISJ RecName: Full=30S ribosomal protein S4 gi|120604917|gb|ABM40657.1| SSU ribosomal protein S4P [Acidovorax sp. JS42] Length = 207 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 86/214 (40%), Positives = 132/214 (61%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S +GLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ A+R +G+T NL+ LE RLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAAERLKGNTGANLLGLLECRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GDV+ V+ KSK+ A ++EA QLA++ +P ++ VN Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKAGDVVAVRDKSKKQARIVEALQLAQQVGMPVWVEVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D + TF ++P + + + +L+VE YSR Sbjct: 177 DKVEGTFKKVPDRDE---FGADINESLIVELYSR 207 >gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 EDL933] gi|15833415|ref|NP_312188.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. Sakai] gi|16131175|ref|NP_417755.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12 substr. MG1655] gi|26249881|ref|NP_755921.1| 30S ribosomal protein S4 [Escherichia coli CFT073] gi|74313815|ref|YP_312234.1| 30S ribosomal protein S4 [Shigella sonnei Ss046] gi|82545659|ref|YP_409606.1| 30S ribosomal protein S4 [Shigella boydii Sb227] gi|82778592|ref|YP_404941.1| 30S ribosomal protein S4 [Shigella dysenteriae Sd197] gi|89110714|ref|AP_004494.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12 substr. W3110] gi|91212723|ref|YP_542709.1| 30S ribosomal protein S4 [Escherichia coli UTI89] gi|110643535|ref|YP_671265.1| 30S ribosomal protein S4 [Escherichia coli 536] gi|110807144|ref|YP_690664.1| 30S ribosomal protein S4 [Shigella flexneri 5 str. 8401] gi|117625578|ref|YP_858901.1| 30S ribosomal protein S4 [Escherichia coli APEC O1] gi|157148871|ref|YP_001456190.1| 30S ribosomal protein S4 [Citrobacter koseri ATCC BAA-895] gi|157156792|ref|YP_001464764.1| 30S ribosomal protein S4 [Escherichia coli E24377A] gi|157162770|ref|YP_001460088.1| 30S ribosomal protein S4 [Escherichia coli HS] gi|161486375|ref|NP_839574.2| 30S ribosomal protein S4 [Shigella flexneri 2a str. 2457T] gi|168752255|ref|ZP_02777277.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4113] gi|168758524|ref|ZP_02783531.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4401] gi|168764979|ref|ZP_02789986.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4501] gi|168769158|ref|ZP_02794165.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4486] gi|168777846|ref|ZP_02802853.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4196] gi|168783864|ref|ZP_02808871.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4076] gi|168786186|ref|ZP_02811193.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC869] gi|168802725|ref|ZP_02827732.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC508] gi|170018468|ref|YP_001723422.1| 30S ribosomal protein S4 [Escherichia coli ATCC 8739] gi|170082816|ref|YP_001732136.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12 substr. DH10B] gi|170683332|ref|YP_001745558.1| 30S ribosomal protein S4 [Escherichia coli SMS-3-5] gi|170769606|ref|ZP_02904059.1| ribosomal protein S4 [Escherichia albertii TW07627] gi|187732648|ref|YP_001881981.1| 30S ribosomal protein S4 [Shigella boydii CDC 3083-94] gi|188495865|ref|ZP_03003135.1| ribosomal protein S4 [Escherichia coli 53638] gi|191174447|ref|ZP_03035948.1| ribosomal protein S4 [Escherichia coli F11] gi|193066487|ref|ZP_03047531.1| ribosomal protein S4 [Escherichia coli E22] gi|193071545|ref|ZP_03052454.1| ribosomal protein S4 [Escherichia coli E110019] gi|194430280|ref|ZP_03062775.1| ribosomal protein S4 [Escherichia coli B171] gi|194435081|ref|ZP_03067319.1| ribosomal protein S4 [Shigella dysenteriae 1012] gi|194439993|ref|ZP_03072051.1| ribosomal protein S4 [Escherichia coli 101-1] gi|195939844|ref|ZP_03085226.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. EC4024] gi|208806540|ref|ZP_03248877.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4206] gi|208812921|ref|ZP_03254250.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4045] gi|208819506|ref|ZP_03259826.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4042] gi|209396300|ref|YP_002272752.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4115] gi|209920762|ref|YP_002294846.1| 30S ribosomal protein S4 [Escherichia coli SE11] gi|215488596|ref|YP_002331027.1| 30S ribosomal protein S4 [Escherichia coli O127:H6 str. E2348/69] gi|217325090|ref|ZP_03441174.1| ribosomal protein S4 [Escherichia coli O157:H7 str. TW14588] gi|218550572|ref|YP_002384363.1| 30S ribosomal protein S4 [Escherichia fergusonii ATCC 35469] gi|218555854|ref|YP_002388767.1| 30S ribosomal protein S4 [Escherichia coli IAI1] gi|218560358|ref|YP_002393271.1| 30S ribosomal protein S4 [Escherichia coli S88] gi|218691583|ref|YP_002399795.1| 30S ribosomal protein S4 [Escherichia coli ED1a] gi|218696989|ref|YP_002404656.1| 30S ribosomal protein S4 [Escherichia coli 55989] gi|218702059|ref|YP_002409688.1| 30S ribosomal protein S4 [Escherichia coli IAI39] gi|218706904|ref|YP_002414423.1| 30S ribosomal protein S4 [Escherichia coli UMN026] gi|227883428|ref|ZP_04001233.1| 30S ribosomal protein S4 [Escherichia coli 83972] gi|237703026|ref|ZP_04533507.1| 30S ribosomal subunit protein S4 [Escherichia sp. 3_2_53FAA] gi|238902387|ref|YP_002928183.1| 30S ribosomal subunit protein S4 [Escherichia coli BW2952] gi|253771880|ref|YP_003034711.1| 30S ribosomal protein S4 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038457|ref|ZP_04872513.1| ribosomal protein S4 [Escherichia sp. 1_1_43] gi|254163224|ref|YP_003046332.1| 30S ribosomal protein S4 [Escherichia coli B str. REL606] gi|254795233|ref|YP_003080070.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. TW14359] gi|256020655|ref|ZP_05434520.1| 30S ribosomal protein S4 [Shigella sp. D9] gi|256025976|ref|ZP_05439841.1| 30S ribosomal protein S4 [Escherichia sp. 4_1_40B] gi|260846094|ref|YP_003223872.1| 30S ribosomal subunit protein S4 [Escherichia coli O103:H2 str. 12009] gi|260857417|ref|YP_003231308.1| 30S ribosomal subunit protein S4 [Escherichia coli O26:H11 str. 11368] gi|260870039|ref|YP_003236441.1| 30S ribosomal subunit protein S4 [Escherichia coli O111:H- str. 11128] gi|261224601|ref|ZP_05938882.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str. FRIK2000] gi|261254505|ref|ZP_05947038.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str. FRIK966] gi|291284654|ref|YP_003501472.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. CB9615] gi|293406893|ref|ZP_06650817.1| rpsD [Escherichia coli FVEC1412] gi|293412715|ref|ZP_06655383.1| 30S ribosomal protein S4 [Escherichia coli B354] gi|293416715|ref|ZP_06659352.1| 30S ribosomal protein S4 [Escherichia coli B185] gi|293453615|ref|ZP_06664034.1| 30S ribosomal protein S4 [Escherichia coli B088] gi|297517820|ref|ZP_06936206.1| 30S ribosomal protein S4 [Escherichia coli OP50] gi|298382634|ref|ZP_06992229.1| small subunit ribosomal protein S4 [Escherichia coli FVEC1302] gi|300815493|ref|ZP_07095718.1| ribosomal protein S4 [Escherichia coli MS 107-1] gi|300822900|ref|ZP_07103036.1| ribosomal protein S4 [Escherichia coli MS 119-7] gi|300896645|ref|ZP_07115161.1| ribosomal protein S4 [Escherichia coli MS 198-1] gi|300903545|ref|ZP_07121467.1| ribosomal protein S4 [Escherichia coli MS 84-1] gi|300918271|ref|ZP_07134875.1| ribosomal protein S4 [Escherichia coli MS 115-1] gi|300921894|ref|ZP_07138050.1| ribosomal protein S4 [Escherichia coli MS 182-1] gi|300932190|ref|ZP_07147469.1| ribosomal protein S4 [Escherichia coli MS 187-1] gi|300935295|ref|ZP_07150305.1| ribosomal protein S4 [Escherichia coli MS 21-1] gi|300946519|ref|ZP_07160784.1| ribosomal protein S4 [Escherichia coli MS 116-1] gi|300954829|ref|ZP_07167255.1| ribosomal protein S4 [Escherichia coli MS 175-1] gi|300973976|ref|ZP_07172383.1| ribosomal protein S4 [Escherichia coli MS 200-1] gi|300979869|ref|ZP_07174745.1| ribosomal protein S4 [Escherichia coli MS 45-1] gi|301018838|ref|ZP_07183082.1| ribosomal protein S4 [Escherichia coli MS 69-1] gi|301046068|ref|ZP_07193246.1| ribosomal protein S4 [Escherichia coli MS 185-1] gi|301305506|ref|ZP_07211598.1| ribosomal protein S4 [Escherichia coli MS 124-1] gi|301325136|ref|ZP_07218670.1| ribosomal protein S4 [Escherichia coli MS 78-1] gi|301643883|ref|ZP_07243914.1| ribosomal protein S4 [Escherichia coli MS 146-1] gi|306816361|ref|ZP_07450499.1| 30S ribosomal protein S4 [Escherichia coli NC101] gi|307139979|ref|ZP_07499335.1| 30S ribosomal protein S4 [Escherichia coli H736] gi|307315125|ref|ZP_07594708.1| ribosomal protein S4 [Escherichia coli W] gi|309794572|ref|ZP_07688994.1| ribosomal protein S4 [Escherichia coli MS 145-7] gi|331643992|ref|ZP_08345121.1| ribosomal protein S4 [Escherichia coli H736] gi|331649093|ref|ZP_08350179.1| ribosomal protein S4 [Escherichia coli M605] gi|331654889|ref|ZP_08355888.1| ribosomal protein S4 [Escherichia coli M718] gi|331659586|ref|ZP_08360524.1| ribosomal protein S4 [Escherichia coli TA206] gi|331664909|ref|ZP_08365810.1| ribosomal protein S4 [Escherichia coli TA143] gi|331670125|ref|ZP_08370964.1| ribosomal protein S4 [Escherichia coli TA271] gi|331674802|ref|ZP_08375559.1| ribosomal protein S4 [Escherichia coli TA280] gi|331679365|ref|ZP_08380035.1| ribosomal protein S4 [Escherichia coli H591] gi|331684938|ref|ZP_08385524.1| ribosomal protein S4 [Escherichia coli H299] gi|62288978|sp|P0A7V8|RS4_ECOLI RecName: Full=30S ribosomal protein S4 gi|62288979|sp|P0A7V9|RS4_ECOL6 RecName: Full=30S ribosomal protein S4 gi|62288980|sp|P0A7W0|RS4_ECO57 RecName: Full=30S ribosomal protein S4 gi|90101715|sp|Q31VY0|RS4_SHIBS RecName: Full=30S ribosomal protein S4 gi|90101716|sp|Q32B55|RS4_SHIDS RecName: Full=30S ribosomal protein S4 gi|90101726|sp|Q3YWW3|RS4_SHISS RecName: Full=30S ribosomal protein S4 gi|122957945|sp|Q0TCG5|RS4_ECOL5 RecName: Full=30S ribosomal protein S4 gi|123047859|sp|Q0T006|RS4_SHIF8 RecName: Full=30S ribosomal protein S4 gi|123387796|sp|Q1R636|RS4_ECOUT RecName: Full=30S ribosomal protein S4 gi|152060947|sp|A1AGI7|RS4_ECOK1 RecName: Full=30S ribosomal protein S4 gi|171855222|sp|A7ZSI5|RS4_ECO24 RecName: Full=30S ribosomal protein S4 gi|172044361|sp|A8A5A1|RS4_ECOHS RecName: Full=30S ribosomal protein S4 gi|172045593|sp|A8AQJ1|RS4_CITK8 RecName: Full=30S ribosomal protein S4 gi|189045379|sp|B1IQ03|RS4_ECOLC RecName: Full=30S ribosomal protein S4 gi|226695077|sp|B2U2R5|RS4_SHIB3 RecName: Full=30S ribosomal protein S4 gi|226699056|sp|B7NLL6|RS4_ECO7I RecName: Full=30S ribosomal protein S4 gi|226699057|sp|B7M102|RS4_ECO8A RecName: Full=30S ribosomal protein S4 gi|226699058|sp|B1X6E8|RS4_ECODH RecName: Full=30S ribosomal protein S4 gi|226699059|sp|B7NDR8|RS4_ECOLU RecName: Full=30S ribosomal protein S4 gi|226699060|sp|B6I210|RS4_ECOSE RecName: Full=30S ribosomal protein S4 gi|226699061|sp|B1LHB0|RS4_ECOSM RecName: Full=30S ribosomal protein S4 gi|226699064|sp|B7LRR3|RS4_ESCF3 RecName: Full=30S ribosomal protein S4 gi|226732180|sp|B7MCR2|RS4_ECO45 RecName: Full=30S ribosomal protein S4 gi|226732181|sp|B5YT15|RS4_ECO5E RecName: Full=30S ribosomal protein S4 gi|254764587|sp|B7UK20|RS4_ECO27 RecName: Full=30S ribosomal protein S4 gi|254764588|sp|B7LHZ8|RS4_ECO55 RecName: Full=30S ribosomal protein S4 gi|254764589|sp|B7N181|RS4_ECO81 RecName: Full=30S ribosomal protein S4 gi|259495276|sp|C4ZUF1|RS4_ECOBW RecName: Full=30S ribosomal protein S4 gi|116666551|pdb|1VS5|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666603|pdb|1VS7|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|256032366|pdb|3E1A|R Chain R, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Pre-Accommodation State gi|256032423|pdb|3E1C|R Chain R, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Post-Accommodation State gi|257097325|pdb|3I1M|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097377|pdb|3I1O|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097429|pdb|3I1Q|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097483|pdb|3I1S|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097537|pdb|3I1Z|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097592|pdb|3I21|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560310|pdb|3KC4|D Chain D, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3kcr gi|308198690|pdb|3OR9|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308198711|pdb|3ORA|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|326634282|pdb|3IZV|H Chain H, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Small Subunit Of A Ribosome Programmed With A Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|326634307|pdb|3IZW|H Chain H, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding.This Entry Contains The Small Subunit Of A Ribosome Programmed With A Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|12517925|gb|AAG58417.1|AE005556_10 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str. EDL933] gi|26110309|gb|AAN82495.1|AE016767_255 30S ribosomal protein S4 [Escherichia coli CFT073] gi|42798|emb|CAA26394.1| unnamed protein product [Escherichia coli] gi|606231|gb|AAA58094.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12 substr. MG1655] gi|1789691|gb|AAC76321.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12 substr. MG1655] gi|13363634|dbj|BAB37584.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str. Sakai] gi|73857292|gb|AAZ89999.1| 30S ribosomal subunit protein S4 [Shigella sonnei Ss046] gi|81242740|gb|ABB63450.1| 30S ribosomal subunit protein S4 [Shigella dysenteriae Sd197] gi|81247070|gb|ABB67778.1| 30S ribosomal subunit protein S4 [Shigella boydii Sb227] gi|85676745|dbj|BAE77995.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K12 substr. W3110] gi|91074297|gb|ABE09178.1| 30S ribosomal subunit protein S4 [Escherichia coli UTI89] gi|110345127|gb|ABG71364.1| 30S ribosomal protein S4 [Escherichia coli 536] gi|110616692|gb|ABF05359.1| 30S ribosomal subunit protein S4 [Shigella flexneri 5 str. 8401] gi|115514702|gb|ABJ02777.1| 30S ribosomal subunit protein S4 [Escherichia coli APEC O1] gi|157068450|gb|ABV07705.1| ribosomal protein S4 [Escherichia coli HS] gi|157078822|gb|ABV18530.1| ribosomal protein S4 [Escherichia coli E24377A] gi|157086076|gb|ABV15754.1| hypothetical protein CKO_04709 [Citrobacter koseri ATCC BAA-895] gi|169753396|gb|ACA76095.1| ribosomal protein S4 [Escherichia coli ATCC 8739] gi|169890651|gb|ACB04358.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12 substr. DH10B] gi|170121663|gb|EDS90594.1| ribosomal protein S4 [Escherichia albertii TW07627] gi|170521050|gb|ACB19228.1| ribosomal protein S4 [Escherichia coli SMS-3-5] gi|187429640|gb|ACD08914.1| ribosomal protein S4 [Shigella boydii CDC 3083-94] gi|187767007|gb|EDU30851.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4196] gi|188013855|gb|EDU51977.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4113] gi|188491064|gb|EDU66167.1| ribosomal protein S4 [Escherichia coli 53638] gi|188998873|gb|EDU67859.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4076] gi|189354671|gb|EDU73090.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4401] gi|189361855|gb|EDU80274.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4486] gi|189365129|gb|EDU83545.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4501] gi|189374088|gb|EDU92504.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC869] gi|189375351|gb|EDU93767.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC508] gi|190905255|gb|EDV64893.1| ribosomal protein S4 [Escherichia coli F11] gi|192925868|gb|EDV80518.1| ribosomal protein S4 [Escherichia coli E22] gi|192955133|gb|EDV85627.1| ribosomal protein S4 [Escherichia coli E110019] gi|194411669|gb|EDX27996.1| ribosomal protein S4 [Escherichia coli B171] gi|194416688|gb|EDX32819.1| ribosomal protein S4 [Shigella dysenteriae 1012] gi|194421045|gb|EDX37074.1| ribosomal protein S4 [Escherichia coli 101-1] gi|208726341|gb|EDZ75942.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4206] gi|208734198|gb|EDZ82885.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4045] gi|208739629|gb|EDZ87311.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4042] gi|209157700|gb|ACI35133.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4115] gi|209757278|gb|ACI76951.1| 30S ribosomal subunit protein S4 [Escherichia coli] gi|209757280|gb|ACI76952.1| 30S ribosomal subunit protein S4 [Escherichia coli] gi|209757282|gb|ACI76953.1| 30S ribosomal subunit protein S4 [Escherichia coli] gi|209757284|gb|ACI76954.1| 30S ribosomal subunit protein S4 [Escherichia coli] gi|209757286|gb|ACI76955.1| 30S ribosomal subunit protein S4 [Escherichia coli] gi|209914021|dbj|BAG79095.1| 30S ribosomal protein S4 [Escherichia coli SE11] gi|215266668|emb|CAS11107.1| 30S ribosomal subunit protein S4 [Escherichia coli O127:H6 str. E2348/69] gi|217321311|gb|EEC29735.1| ribosomal protein S4 [Escherichia coli O157:H7 str. TW14588] gi|218353721|emb|CAU99998.1| 30S ribosomal subunit protein S4 [Escherichia coli 55989] gi|218358113|emb|CAQ90760.1| 30S ribosomal subunit protein S4 [Escherichia fergusonii ATCC 35469] gi|218362622|emb|CAR00248.1| 30S ribosomal subunit protein S4 [Escherichia coli IAI1] gi|218367127|emb|CAR04901.1| 30S ribosomal subunit protein S4 [Escherichia coli S88] gi|218372045|emb|CAR19905.1| 30S ribosomal subunit protein S4 [Escherichia coli IAI39] gi|218429147|emb|CAR10099.2| 30S ribosomal subunit protein S4 [Escherichia coli ED1a] gi|218434001|emb|CAR14918.1| 30S ribosomal subunit protein S4 [Escherichia coli UMN026] gi|222035005|emb|CAP77748.1| 30S ribosomal protein S4 [Escherichia coli LF82] gi|226838963|gb|EEH70986.1| ribosomal protein S4 [Escherichia sp. 1_1_43] gi|226902290|gb|EEH88549.1| 30S ribosomal subunit protein S4 [Escherichia sp. 3_2_53FAA] gi|227839572|gb|EEJ50038.1| 30S ribosomal protein S4 [Escherichia coli 83972] gi|238859799|gb|ACR61797.1| 30S ribosomal subunit protein S4 [Escherichia coli BW2952] gi|242378823|emb|CAQ33615.1| 30S ribosomal subunit protein S4, subunit of 30S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253322924|gb|ACT27526.1| ribosomal protein S4 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975125|gb|ACT40796.1| 30S ribosomal protein S4 [Escherichia coli B str. REL606] gi|253979281|gb|ACT44951.1| 30S ribosomal protein S4 [Escherichia coli BL21(DE3)] gi|254594633|gb|ACT73994.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str. TW14359] gi|257756066|dbj|BAI27568.1| 30S ribosomal subunit protein S4 [Escherichia coli O26:H11 str. 11368] gi|257761241|dbj|BAI32738.1| 30S ribosomal subunit protein S4 [Escherichia coli O103:H2 str. 12009] gi|257766395|dbj|BAI37890.1| 30S ribosomal subunit protein S4 [Escherichia coli O111:H- str. 11128] gi|260447685|gb|ACX38107.1| ribosomal protein S4 [Escherichia coli DH1] gi|281180331|dbj|BAI56661.1| 30S ribosomal protein S4 [Escherichia coli SE15] gi|281602661|gb|ADA75645.1| 30S ribosomal protein S4 [Shigella flexneri 2002017] gi|284923302|emb|CBG36396.1| 30S ribosomal subunit protein S4 [Escherichia coli 042] gi|290764527|gb|ADD58488.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. CB9615] gi|291321741|gb|EFE61172.1| 30S ribosomal protein S4 [Escherichia coli B088] gi|291425704|gb|EFE98738.1| rpsD [Escherichia coli FVEC1412] gi|291431291|gb|EFF04276.1| 30S ribosomal protein S4 [Escherichia coli B185] gi|291468362|gb|EFF10855.1| 30S ribosomal protein S4 [Escherichia coli B354] gi|294491877|gb|ADE90633.1| ribosomal protein S4 [Escherichia coli IHE3034] gi|298276470|gb|EFI17988.1| small subunit ribosomal protein S4 [Escherichia coli FVEC1302] gi|300301894|gb|EFJ58279.1| ribosomal protein S4 [Escherichia coli MS 185-1] gi|300308986|gb|EFJ63506.1| ribosomal protein S4 [Escherichia coli MS 200-1] gi|300318229|gb|EFJ68013.1| ribosomal protein S4 [Escherichia coli MS 175-1] gi|300359476|gb|EFJ75346.1| ribosomal protein S4 [Escherichia coli MS 198-1] gi|300399548|gb|EFJ83086.1| ribosomal protein S4 [Escherichia coli MS 69-1] gi|300404418|gb|EFJ87956.1| ribosomal protein S4 [Escherichia coli MS 84-1] gi|300409380|gb|EFJ92918.1| ribosomal protein S4 [Escherichia coli MS 45-1] gi|300414532|gb|EFJ97842.1| ribosomal protein S4 [Escherichia coli MS 115-1] gi|300421742|gb|EFK05053.1| ribosomal protein S4 [Escherichia coli MS 182-1] gi|300453765|gb|EFK17385.1| ribosomal protein S4 [Escherichia coli MS 116-1] gi|300459451|gb|EFK22944.1| ribosomal protein S4 [Escherichia coli MS 21-1] gi|300460014|gb|EFK23507.1| ribosomal protein S4 [Escherichia coli MS 187-1] gi|300524666|gb|EFK45735.1| ribosomal protein S4 [Escherichia coli MS 119-7] gi|300532385|gb|EFK53447.1| ribosomal protein S4 [Escherichia coli MS 107-1] gi|300839201|gb|EFK66961.1| ribosomal protein S4 [Escherichia coli MS 124-1] gi|300848015|gb|EFK75775.1| ribosomal protein S4 [Escherichia coli MS 78-1] gi|301077786|gb|EFK92592.1| ribosomal protein S4 [Escherichia coli MS 146-1] gi|305850757|gb|EFM51214.1| 30S ribosomal protein S4 [Escherichia coli NC101] gi|306905474|gb|EFN36009.1| ribosomal protein S4 [Escherichia coli W] gi|307555384|gb|ADN48159.1| 30S ribosomal subunit protein S4 [Escherichia coli ABU 83972] gi|307628331|gb|ADN72635.1| 30S ribosomal protein S4 [Escherichia coli UM146] gi|308121622|gb|EFO58884.1| ribosomal protein S4 [Escherichia coli MS 145-7] gi|309703708|emb|CBJ03049.1| 30S ribosomal subunit protein S4 [Escherichia coli ETEC H10407] gi|312947847|gb|ADR28674.1| 30S ribosomal protein S4 [Escherichia coli O83:H1 str. NRG 857C] gi|315062588|gb|ADT76915.1| 30S ribosomal subunit protein S4 [Escherichia coli W] gi|315137871|dbj|BAJ45030.1| 30S ribosomal protein S4 [Escherichia coli DH1] gi|315255880|gb|EFU35848.1| ribosomal protein S4 [Escherichia coli MS 85-1] gi|315284628|gb|EFU44073.1| ribosomal protein S4 [Escherichia coli MS 110-3] gi|315292386|gb|EFU51738.1| ribosomal protein S4 [Escherichia coli MS 153-1] gi|315298595|gb|EFU57850.1| ribosomal protein S4 [Escherichia coli MS 16-3] gi|320182706|gb|EFW57592.1| SSU ribosomal protein S4p (S9e) [Shigella boydii ATCC 9905] gi|320639601|gb|EFX09195.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. G5101] gi|320645099|gb|EFX14115.1| 30S ribosomal protein S4 [Escherichia coli O157:H- str. 493-89] gi|320650410|gb|EFX18876.1| 30S ribosomal protein S4 [Escherichia coli O157:H- str. H 2687] gi|320655935|gb|EFX23855.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661387|gb|EFX28802.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. USDA 5905] gi|320666409|gb|EFX33392.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. LSU-61] gi|323162975|gb|EFZ48810.1| ribosomal protein S4 [Escherichia coli E128010] gi|323173932|gb|EFZ59560.1| ribosomal protein S4 [Escherichia coli LT-68] gi|323189099|gb|EFZ74383.1| ribosomal protein S4 [Escherichia coli RN587/1] gi|323376825|gb|ADX49093.1| ribosomal protein S4 [Escherichia coli KO11] gi|323934505|gb|EGB30913.1| ribosomal protein S4 [Escherichia coli E1520] gi|323939282|gb|EGB35494.1| ribosomal protein S4 [Escherichia coli E482] gi|323944283|gb|EGB40359.1| ribosomal protein S4 [Escherichia coli H120] gi|323950210|gb|EGB46092.1| ribosomal protein S4 [Escherichia coli H252] gi|323954581|gb|EGB50364.1| ribosomal protein S4 [Escherichia coli H263] gi|323959553|gb|EGB55206.1| ribosomal protein S4 [Escherichia coli H489] gi|323966258|gb|EGB61693.1| ribosomal protein S4 [Escherichia coli M863] gi|323970100|gb|EGB65374.1| ribosomal protein S4 [Escherichia coli TA007] gi|323974751|gb|EGB69864.1| ribosomal protein S4 [Escherichia coli TW10509] gi|324009031|gb|EGB78250.1| ribosomal protein S4 [Escherichia coli MS 57-2] gi|324014913|gb|EGB84132.1| ribosomal protein S4 [Escherichia coli MS 60-1] gi|324017885|gb|EGB87104.1| ribosomal protein S4 [Escherichia coli MS 117-3] gi|324111975|gb|EGC05954.1| ribosomal protein S4 [Escherichia fergusonii B253] gi|324116314|gb|EGC10234.1| ribosomal protein S4 [Escherichia coli E1167] gi|327250944|gb|EGE62637.1| ribosomal protein S4 [Escherichia coli STEC_7v] gi|331036286|gb|EGI08512.1| ribosomal protein S4 [Escherichia coli H736] gi|331041591|gb|EGI13735.1| ribosomal protein S4 [Escherichia coli M605] gi|331046904|gb|EGI18982.1| ribosomal protein S4 [Escherichia coli M718] gi|331052801|gb|EGI24834.1| ribosomal protein S4 [Escherichia coli TA206] gi|331057419|gb|EGI29405.1| ribosomal protein S4 [Escherichia coli TA143] gi|331062187|gb|EGI34107.1| ribosomal protein S4 [Escherichia coli TA271] gi|331067711|gb|EGI39109.1| ribosomal protein S4 [Escherichia coli TA280] gi|331072537|gb|EGI43862.1| ribosomal protein S4 [Escherichia coli H591] gi|331077309|gb|EGI48521.1| ribosomal protein S4 [Escherichia coli H299] gi|332090406|gb|EGI95504.1| ribosomal protein S4 [Shigella boydii 3594-74] gi|332104203|gb|EGJ07549.1| 30S ribosomal subunit protein S4 [Shigella sp. D9] Length = 206 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206 >gi|288553742|ref|YP_003425677.1| 30S ribosomal protein S4 [Bacillus pseudofirmus OF4] gi|288544902|gb|ADC48785.1| 30S ribosomal protein S4 [Bacillus pseudofirmus OF4] Length = 200 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LAKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G ++E++FR IF +A + G N + LESRLD +VYR T AARQ VNH H Sbjct: 60 MFG-VNERQFRRIFDDAGKMPGIHGENFMILLESRLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I +++KS+ L+ V EA + + P Y++ + + + TF Sbjct: 119 IMVDGGRVDIPSYRVKPGQTIALREKSRDLSVVKEALEANDFT-PAYVTFDAEKLEGTFS 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEITEALIVEFYSR 200 >gi|194017389|ref|ZP_03056001.1| ribosomal protein S4 [Bacillus pumilus ATCC 7061] gi|194011257|gb|EDW20827.1| ribosomal protein S4 [Bacillus pumilus ATCC 7061] Length = 200 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKISRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +AD+ G N + LE+RLD +VYR T ARQ VNH H Sbjct: 60 MYG-VNERQFRTLFDKADKLPGKQGENFMILLETRLDNLVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I S+ K G I +++KS+ LA V E+ ++ VPEY++ + + + TF Sbjct: 119 ILVDGSRVDIPSFSVKPGQTIALREKSQNLAVVKESVEV-NSFVPEYLTFDAEKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSELAP---EISEQLIVEFYSR 200 >gi|237728631|ref|ZP_04559112.1| ribosomal protein S4 [Citrobacter sp. 30_2] gi|283835713|ref|ZP_06355454.1| hypothetical protein CIT292_10106 [Citrobacter youngae ATCC 29220] gi|226909253|gb|EEH95171.1| ribosomal protein S4 [Citrobacter sp. 30_2] gi|291068393|gb|EFE06502.1| ribosomal protein S4 [Citrobacter youngae ATCC 29220] Length = 206 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLGLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206 >gi|260592739|ref|ZP_05858197.1| ribosomal protein S4 [Prevotella veroralis F0319] gi|288803959|ref|ZP_06409382.1| ribosomal protein S4 [Prevotella melaninogenica D18] gi|302345100|ref|YP_003813453.1| ribosomal protein S4 [Prevotella melaninogenica ATCC 25845] gi|260535270|gb|EEX17887.1| ribosomal protein S4 [Prevotella veroralis F0319] gi|288333592|gb|EFC72044.1| ribosomal protein S4 [Prevotella melaninogenica D18] gi|302149280|gb|ADK95542.1| ribosomal protein S4 [Prevotella melaninogenica ATCC 25845] Length = 202 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K + R++ PG HG R+ K S +G QL KQK K Sbjct: 1 MARYIGPKSRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F +A ++ G T L+ LESRLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-ERQFRNLFDKAAKAEGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNG VNI SY+ K GDV+ V++K+K L + A ++ + + F+ Sbjct: 119 IVVNGNVVNIASYQVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDDNAKCGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201 >gi|238921420|ref|YP_002934935.1| 30S ribosomal protein S4 [Edwardsiella ictaluri 93-146] gi|269140550|ref|YP_003297251.1| 30S ribosomal protein S4 [Edwardsiella tarda EIB202] gi|294638030|ref|ZP_06716290.1| ribosomal protein S4 [Edwardsiella tarda ATCC 23685] gi|259495277|sp|C5BF28|RS4_EDWI9 RecName: Full=30S ribosomal protein S4 gi|238870989|gb|ACR70700.1| 30S ribosomal protein S4 (BS4) [Edwardsiella ictaluri 93-146] gi|267986211|gb|ACY86040.1| 30S ribosomal protein S4 [Edwardsiella tarda EIB202] gi|291088822|gb|EFE21383.1| ribosomal protein S4 [Edwardsiella tarda ATCC 23685] gi|304560335|gb|ADM42999.1| SSU ribosomal protein S4p (S9e) [Edwardsiella tarda FL6-60] Length = 206 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ V++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIVVNGRVVNIASYQVSPNDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + +L+VE YS+ Sbjct: 179 EGVFKRQPERSD---LSADINEHLIVELYSK 206 >gi|160896494|ref|YP_001562076.1| 30S ribosomal protein S4 [Delftia acidovorans SPH-1] gi|226697834|sp|A9BRX4|RS4_DELAS RecName: Full=30S ribosomal protein S4 gi|160362078|gb|ABX33691.1| ribosomal protein S4 [Delftia acidovorans SPH-1] Length = 207 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + KS +T+ PG HG+ + S FGLQLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSIADKSKFDTK---PGQHGRTSGQRTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ AD+ +G+T NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAADKKKGNTGANLLSLLESRLDNVVYRMGFGSTRSEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GDV+ V++KSK+ A ++EA QLA + P ++ V+ Sbjct: 117 QLVSHKAITVNGQSVNIPSYMVKVGDVVAVREKSKKQARIVEALQLAGQVGFPAWVEVSA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D TF + P + + + +L+VE YSR Sbjct: 177 DKAEGTFKKSPDRDE---FGADINESLIVELYSR 207 >gi|262280201|ref|ZP_06057985.1| 30S ribosomal protein S4 [Acinetobacter calcoaceticus RUH2202] gi|262257979|gb|EEY76713.1| 30S ribosomal protein S4 [Acinetobacter calcoaceticus RUH2202] Length = 208 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P ++ V+H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMDVDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRAD---LPAEINESLIVELYSK 208 >gi|167036828|ref|YP_001664406.1| 30S ribosomal protein S4 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039547|ref|YP_001662532.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X514] gi|256752659|ref|ZP_05493511.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1] gi|300915202|ref|ZP_07132517.1| ribosomal protein S4 [Thermoanaerobacter sp. X561] gi|307725126|ref|YP_003904877.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X513] gi|320115250|ref|YP_004185409.1| 30S ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226695091|sp|B0KCM7|RS4_THEP3 RecName: Full=30S ribosomal protein S4 gi|226695092|sp|B0K5S0|RS4_THEPX RecName: Full=30S ribosomal protein S4 gi|166853787|gb|ABY92196.1| RNA-binding S4 domain protein [Thermoanaerobacter sp. X514] gi|166855662|gb|ABY94070.1| RNA-binding S4 domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748479|gb|EEU61531.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1] gi|300888926|gb|EFK84073.1| ribosomal protein S4 [Thermoanaerobacter sp. X561] gi|307582187|gb|ADN55586.1| ribosomal protein S4 [Thermoanaerobacter sp. X513] gi|319928341|gb|ADV79026.1| ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 206 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 126/212 (59%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + K P R Y PG HGQ +K K + +G+QLR Sbjct: 1 MGRYTGPTCRLCRREGMKLYLKGDKCYTDKCPFARRGYAPGQHGQEKK-KLTNYGMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+YYG + E++F +++EA+R +G T NL+ LE RLD +V+R F + ARQ Sbjct: 60 KQKLKRYYGVL-ERQFERLYEEAERMKGITGENLLQLLERRLDNVVFRLGFAASRPQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V+H H+ VNG+ V+I S+ K GDVI V++KS+ + + +++ R+VP+++ +N D Sbjct: 119 LVSHGHIEVNGKKVDIPSFLVKPGDVISVREKSRSMELIKNNLEVS-RNVPDWLELNKDA 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + + P +Q +L+VE YS+ Sbjct: 178 FEGRVVSLP-RREHIDLP--IQEHLIVELYSK 206 >gi|53715440|ref|YP_101432.1| 30S ribosomal protein S4 [Bacteroides fragilis YCH46] gi|60683412|ref|YP_213556.1| 30S ribosomal protein S4 [Bacteroides fragilis NCTC 9343] gi|265767574|ref|ZP_06095240.1| ribosomal protein S4 [Bacteroides sp. 2_1_16] gi|61215469|sp|Q64NN4|RS4_BACFR RecName: Full=30S ribosomal protein S4 gi|81313536|sp|Q5L8D5|RS4_BACFN RecName: Full=30S ribosomal protein S4 gi|52218305|dbj|BAD50898.1| 30S ribosomal protein S4 [Bacteroides fragilis YCH46] gi|60494846|emb|CAH09653.1| putative 30S ribosomal protein S4 [Bacteroides fragilis NCTC 9343] gi|263252879|gb|EEZ24391.1| ribosomal protein S4 [Bacteroides sp. 2_1_16] gi|301164897|emb|CBW24458.1| putative 30S ribosomal protein S4 [Bacteroides fragilis 638R] Length = 201 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD IV+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQMLEGRLDNIVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G +I V+++SK L + + ++ + + V + Sbjct: 119 ITVDGQVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|172044373|sp|A4JAR5|RS4_BURVG RecName: Full=30S ribosomal protein S4 Length = 207 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GDVI +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDVIAIREKAKKQARIIEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207 >gi|282858349|ref|ZP_06267529.1| ribosomal protein S4 [Prevotella bivia JCVIHMP010] gi|282588797|gb|EFB93922.1| ribosomal protein S4 [Prevotella bivia JCVIHMP010] Length = 201 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K + R++ PG HG R+ K S +G QL KQK K Sbjct: 1 MARYIGPKTRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A +S G T L+ LE+RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNLFEKAAKSSGITGEVLLQSLEARLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG VNI SY K GDV+ V++K+K L + A ++ + + F+ Sbjct: 119 ITVNGDVVNIASYNVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENAKAGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201 >gi|307132815|ref|YP_003884831.1| 30S ribosomal subunit protein S4 [Dickeya dadantii 3937] gi|306530344|gb|ADN00275.1| 30S ribosomal subunit protein S4 [Dickeya dadantii 3937] Length = 206 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|194290998|ref|YP_002006905.1| 30S ribosomal protein s4 [Cupriavidus taiwanensis LMG 19424] gi|226697831|sp|B3R7E4|RS4_CUPTR RecName: Full=30S ribosomal protein S4 gi|193224833|emb|CAQ70844.1| 30S ribosomal subunit protein S4 [Cupriavidus taiwanensis LMG 19424] Length = 207 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSSRRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDVI ++++SK+ + EA LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQTLNVPSAQIKSGDVITIREQSKKQVRIAEALSLAEQSGFPTWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPDRAD---ISGDINESLIVELYSR 207 >gi|310815406|ref|YP_003963370.1| ribosomal protein S4 [Ketogulonicigenium vulgare Y25] gi|308754141|gb|ADO42070.1| ribosomal protein S4 [Ketogulonicigenium vulgare Y25] Length = 192 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 131/192 (68%), Positives = 159/192 (82%), Gaps = 1/192 (0%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +GEN+WGRPKSP+N R YGPG HGQRRK K S FG QLRAKQK+K YYGD++EK+FR I+ Sbjct: 1 MGENIWGRPKSPLNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKGYYGDLTEKQFRRIY 60 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +A+R++GDT NL+ LE RLD +VYRAK+V T+FAARQFVNH HV VNG SVNI SYR Sbjct: 61 SDAERTKGDTGENLVGLLERRLDAVVYRAKWVATVFAARQFVNHGHVTVNGVSVNIPSYR 120 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 KEGDVIE++ KSKQLA VLEA LAER+VP+YI V++ + AT+VR PS L DVPYPVI Sbjct: 121 VKEGDVIEIRAKSKQLAVVLEAINLAERNVPDYIEVDNSKLTATYVRTPS-LADVPYPVI 179 Query: 195 MQPNLVVEFYSR 206 M+PNL+VEFY++ Sbjct: 180 MEPNLIVEFYAK 191 >gi|172059366|ref|YP_001807018.1| 30S ribosomal protein S4 [Burkholderia ambifaria MC40-6] gi|226697813|sp|B1YRQ4|RS4_BURA4 RecName: Full=30S ribosomal protein S4 gi|171991883|gb|ACB62802.1| ribosomal protein S4 [Burkholderia ambifaria MC40-6] Length = 207 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GDV+ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207 >gi|85713166|ref|ZP_01044198.1| 30S ribosomal protein S4 [Idiomarina baltica OS145] gi|85693036|gb|EAQ31002.1| 30S ribosomal protein S4 [Idiomarina baltica OS145] Length = 206 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIETAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARIKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNG+ VNI S+ + DV+ V++K+K+ A + A +L+E R+ P ++ V+ M Sbjct: 119 SHKAVVVNGQVVNIPSFMVRPEDVVSVREKAKKQARISAALELSEQREKPVWLEVDSSKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGQFKRLPERSD---LSAEINEQLIVELYSK 206 >gi|253566696|ref|ZP_04844149.1| 30S ribosomal protein S4 [Bacteroides sp. 3_2_5] gi|251944868|gb|EES85343.1| 30S ribosomal protein S4 [Bacteroides sp. 3_2_5] Length = 201 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD IV+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQMLEGRLDNIVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G +I V+++SK L + + ++ + + V + Sbjct: 119 ITVDGQVVNIPSYVVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|329956728|ref|ZP_08297301.1| ribosomal protein S4 [Bacteroides clarus YIT 12056] gi|328524100|gb|EGF51176.1| ribosomal protein S4 [Bacteroides clarus YIT 12056] Length = 201 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VN+ SY K G VI V+++SK L + + ++ + + V + Sbjct: 119 ITVDGEVVNVPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNAKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|78064949|ref|YP_367718.1| 30S ribosomal protein S4 [Burkholderia sp. 383] gi|90101679|sp|Q39KE2|RS4_BURS3 RecName: Full=30S ribosomal protein S4 gi|77965694|gb|ABB07074.1| SSU ribosomal protein S4P [Burkholderia sp. 383] Length = 207 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GDV+ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKSGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + + +L+VE YSR Sbjct: 177 KKFEGTFKQMPERAE---IAGDINESLIVELYSR 207 >gi|320540587|ref|ZP_08040237.1| 30S ribosomal subunit protein S4 [Serratia symbiotica str. Tucson] gi|320029518|gb|EFW11547.1| 30S ribosomal subunit protein S4 [Serratia symbiotica str. Tucson] Length = 206 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKASLELAEQREKPTWLEVDALKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|317049816|ref|YP_004117464.1| 30S ribosomal protein S4 [Pantoea sp. At-9b] gi|316951433|gb|ADU70908.1| ribosomal protein S4 [Pantoea sp. At-9b] Length = 206 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKSILVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|270264349|ref|ZP_06192615.1| 30S ribosomal protein S4 [Serratia odorifera 4Rx13] gi|270041485|gb|EFA14583.1| 30S ribosomal protein S4 [Serratia odorifera 4Rx13] Length = 206 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKASLELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRMPERTD---LSADINEHLIVELYSK 206 >gi|259909976|ref|YP_002650332.1| 30S ribosomal protein S4 [Erwinia pyrifoliae Ep1/96] gi|292489825|ref|YP_003532715.1| 30S ribosomal protein S4 [Erwinia amylovora CFBP1430] gi|292900867|ref|YP_003540236.1| 30S ribosomal protein S4 [Erwinia amylovora ATCC 49946] gi|224965598|emb|CAX57130.1| 30S ribosomal protein S4 [Erwinia pyrifoliae Ep1/96] gi|283480075|emb|CAY75991.1| 30S ribosomal protein S4 [Erwinia pyrifoliae DSM 12163] gi|291200715|emb|CBJ47848.1| 30S ribosomal subunit protein S4 [Erwinia amylovora ATCC 49946] gi|291555262|emb|CBA23541.1| 30S ribosomal protein S4 [Erwinia amylovora CFBP1430] gi|312174007|emb|CBX82260.1| 30S ribosomal protein S4 [Erwinia amylovora ATCC BAA-2158] Length = 206 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR V+I SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKSIMVNGRVVSIASYQVTPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|188584864|ref|YP_001916409.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF] gi|226699094|sp|B2A4P9|RS4_NATTJ RecName: Full=30S ribosomal protein S4 gi|179349551|gb|ACB83821.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 209 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K ++ ++Y PG HG R+SK S +G+QLR Sbjct: 1 MARYQGPVCRLCRREGTKLFLKGERCYTDKCAIDKKAYAPGQHGPTRRSKQSEYGMQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + E +FR F+EADR +G T L+ LE+RLD +VYR F + ARQ Sbjct: 61 KQKARRIYGVL-ENQFRRYFREADRKKGITGQTLLRLLETRLDNVVYRMGFAASRAEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 FVNH H++VNG+ VN+ SY K GD + V++KS+ + V E +LAE VPE++ +H+ Sbjct: 120 FVNHGHIMVNGKRVNVASYEVKPGDEVVVREKSRDIPRVQELKELAEGYRVPEWLEADHE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N VR P + V ++ +L+VE YSR Sbjct: 180 NFTGRVVRYPEREE---IDVPVEEHLIVELYSR 209 >gi|330722391|gb|EGH00239.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC2047] Length = 206 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + P++++ PG+HG R+S+ S +GLQLR KQ Sbjct: 1 MARYLGPTCKLSRREGTDLFLKSGVRPLDSKCKADTIPGVHGA-RRSRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R G T NL+ LE+RLD +VYR F T ARQ V Sbjct: 60 KVRRLYGVL-EKQFRNYYKEAARLSGATGENLLQLLETRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ + VNG +VN+ SY+ K GDV+ V++K+K + A ++A +R +PE++ V+ M Sbjct: 119 SHKSITVNGETVNVPSYKIKAGDVVAVREKAKNQLRIKSALEVAGQRGMPEWVQVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F IP + P + NL+VE YS+ Sbjct: 179 SGEFKSIPERGE---LPAEINENLIVELYSK 206 >gi|297717888|gb|ADI50087.1| SSU ribosomal protein S4p [Candidatus Odyssella thessalonicensis L13] Length = 204 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 127/206 (61%), Positives = 161/206 (78%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR ++K+KIDRR+G NLWGRPKSPVN+RSYGPG HGQ+R KPS +GLQLRAKQK+K Sbjct: 1 MTKRINAKYKIDRRLGVNLWGRPKSPVNSRSYGPGQHGQQRS-KPSDYGLQLRAKQKLKG 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISE++FR +++EA R RGDTS NLI LE RLD +VYR KFV T FAARQ VNH H Sbjct: 60 YYGNISERQFRRLYQEAIRRRGDTSENLIELLERRLDAVVYRMKFVATPFAARQLVNHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI S++ K+GD I + K K+ +V+ ++Q ERDVPEY++V+H M ++ Sbjct: 120 VAVNGKRVNIPSFQLKDGDEISLIGKIKENVNVIASTQSNERDVPEYMTVDHKKMEGKYI 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P +VPYPV M+PNLV+EFYSR Sbjct: 180 RGP-KFTEVPYPVHMEPNLVIEFYSR 204 >gi|253991665|ref|YP_003043021.1| 30S ribosomal protein S4 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783115|emb|CAQ86280.1| 30s ribosomal subunit protein s4 [Photorhabdus asymbiotica] Length = 206 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+S LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLSLLEGRLDNVVYRMGFGATRAESRQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ V++KSK+ + + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQREKPTWLEVDAVKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERAD---LSADINEHLIVELYSK 206 >gi|222109617|ref|YP_002551881.1| 30S ribosomal protein s4 [Acidovorax ebreus TPSY] gi|254764586|sp|B9MBW1|RS4_DIAST RecName: Full=30S ribosomal protein S4 gi|221729061|gb|ACM31881.1| ribosomal protein S4 [Acidovorax ebreus TPSY] Length = 207 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 86/214 (40%), Positives = 133/214 (62%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S +GLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ A+R +G+T NL+ LE RLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAAERLKGNTGANLLGLLECRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GDV+ V++KSK+ A ++EA QLA++ +P ++ VN Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKAGDVVAVREKSKKQARIVEALQLAQQVGMPVWVEVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D + TF ++P + + + +L+VE YSR Sbjct: 177 DKVEGTFKKVPDRDE---FGADINESLIVELYSR 207 >gi|113460232|ref|YP_718290.1| 30S ribosomal protein S4 [Haemophilus somnus 129PT] gi|123327085|sp|Q0I138|RS4_HAES1 RecName: Full=30S ribosomal protein S4 gi|112822275|gb|ABI24364.1| SSU ribosomal protein S4P [Haemophilus somnus 129PT] Length = 206 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LAE R+ P ++ V M Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQRERPTWLEVEAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206 >gi|307266987|ref|ZP_07548503.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1] gi|326390634|ref|ZP_08212189.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200] gi|306917972|gb|EFN48230.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1] gi|325993312|gb|EGD51749.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200] Length = 206 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + K PV R Y PG HGQ +K K + +G+QLR Sbjct: 1 MGRYIGPTCRLCRREGMKLYLKGDKCYTDKCPVARRGYAPGQHGQEKK-KLTNYGMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+YYG + E++F ++EA+R +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKLKRYYGVL-ERQFVRYYEEAERMKGITGENLLQLLERRLDNVVYRLGFAASRPQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V+H H+ VNG+ V+I S+ K GDVI V++KS+ + + +++ R+VP+++ +N D Sbjct: 119 LVSHGHIEVNGKKVDIPSFLVKPGDVISVREKSRSMELIKNNLEVS-RNVPDWLELNKDA 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + + P +Q +L+VE YS+ Sbjct: 178 FEGRVVSLP-RREHIDLP--IQEHLIVELYSK 206 >gi|228472245|ref|ZP_04057011.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624] gi|228276448|gb|EEK15172.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624] Length = 201 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS ++Y PG HG R+++K S + +QL+ KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGEDKS-FAKKNYPPGQHGINRKRAKRSEYAIQLQEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++F++++++A RS+G T L+ E+RLD +VYR P+ AARQ V+HR Sbjct: 60 YTYG-ILERQFQNMYEKARRSKGVTGEVLLQLCEARLDNVVYRMGIAPSRRAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GD++ V+ KS+ L + E S + V E+I+ N + + TF Sbjct: 119 HITVNGEVVNIPSYSLKPGDIVGVRHKSQSLTVI-ENSLASNSSVYEWITWNPEKLEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + P ++ L+VE YS+ Sbjct: 178 VALPQR---IQIPENIKEQLIVELYSK 201 >gi|85060232|ref|YP_455934.1| 30S ribosomal protein S4 [Sodalis glossinidius str. 'morsitans'] gi|123518718|sp|Q2NQP6|RS4_SODGM RecName: Full=30S ribosomal protein S4 gi|84780752|dbj|BAE75529.1| 30S ribosomal protein S4 [Sodalis glossinidius str. 'morsitans'] Length = 206 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVTPNDVVSIREKAKKQSRVRASLELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|297537555|ref|YP_003673324.1| 30S ribosomal protein S4 [Methylotenera sp. 301] gi|297256902|gb|ADI28747.1| ribosomal protein S4 [Methylotenera sp. 301] Length = 209 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 118/213 (55%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R++ PG HGQRR + S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKAEKCFTDKCAIEKRNFPPGQHGQRRNQRLSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FRS + EADR +G T NL+ LE RLD + YR + ARQ Sbjct: 61 KQKVRRIYGVL-EAQFRSYYAEADRQKGITGENLLQLLECRLDNVTYRMGLGGSRTEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H +LVNGR VNI SY+ K GDV+ V + SK + A + AE R P +I V+ Sbjct: 120 IVRHNSILVNGRRVNIPSYQVKAGDVVSVAESSKTQLRIKGALEAAEQRGFPAWIEVDVK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P + P + +LVVE YS+ Sbjct: 180 ALKGTFKAKPQRDE---LPPTINESLVVELYSK 209 >gi|170700719|ref|ZP_02891714.1| ribosomal protein S4 [Burkholderia ambifaria IOP40-10] gi|171318373|ref|ZP_02907531.1| ribosomal protein S4 [Burkholderia ambifaria MEX-5] gi|152060939|sp|Q0BJ21|RS4_BURCM RecName: Full=30S ribosomal protein S4 gi|170134389|gb|EDT02722.1| ribosomal protein S4 [Burkholderia ambifaria IOP40-10] gi|171096451|gb|EDT41350.1| ribosomal protein S4 [Burkholderia ambifaria MEX-5] Length = 207 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GD++ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDIVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207 >gi|296332057|ref|ZP_06874521.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675548|ref|YP_003867220.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii str. W23] gi|296150828|gb|EFG91713.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413792|gb|ADM38911.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii str. W23] Length = 200 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 123/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + L+SRLD +VY+ T ARQ VNH H Sbjct: 60 MYG-VNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I SY+ K G I V++KS+ L+ + E+ ++ VPEY++ + + + TF Sbjct: 119 ILVDGSRVDIPSYQVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200 >gi|146313361|ref|YP_001178435.1| 30S ribosomal protein S4 [Enterobacter sp. 638] gi|172046002|sp|A4WFA4|RS4_ENT38 RecName: Full=30S ribosomal protein S4 gi|145320237|gb|ABP62384.1| SSU ribosomal protein S4P [Enterobacter sp. 638] Length = 206 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRTYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ K DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVCIREKAKKQSRVKAALELAEQREKPTWLEVDASKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206 >gi|291619151|ref|YP_003521893.1| RpsD [Pantoea ananatis LMG 20103] gi|291154181|gb|ADD78765.1| RpsD [Pantoea ananatis LMG 20103] Length = 206 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ VLVNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKSVLVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|170695706|ref|ZP_02886848.1| ribosomal protein S4 [Burkholderia graminis C4D1M] gi|170139311|gb|EDT07497.1| ribosomal protein S4 [Burkholderia graminis C4D1M] Length = 207 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + K GDV+ V+++ K+ A +LEA LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGVVSNIPSMQVKAGDVVAVREQKKKQARILEALSLAEQGGMPSWVAVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + +L+VE YSR Sbjct: 177 KKFEGTFKSKPERSD---IAGDINESLIVELYSR 207 >gi|262273355|ref|ZP_06051169.1| SSU ribosomal protein S4p (S9e) [Grimontia hollisae CIP 101886] gi|262222333|gb|EEY73644.1| SSU ribosomal protein S4p (S9e) [Grimontia hollisae CIP 101886] Length = 206 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 129/211 (61%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DVI +++K+K A + A ++ A+R++P +I V+ + M Sbjct: 119 SHKAILVNGKVVNVPSFKVTANDVISIREKAKNQARIKAALEIAAQRELPTWIEVDSNKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206 >gi|228474508|ref|ZP_04059241.1| ribosomal protein S4 [Staphylococcus hominis SK119] gi|314936181|ref|ZP_07843528.1| ribosomal protein S4 [Staphylococcus hominis subsp. hominis C80] gi|228271537|gb|EEK12899.1| ribosomal protein S4 [Staphylococcus hominis SK119] gi|313654800|gb|EFS18545.1| ribosomal protein S4 [Staphylococcus hominis subsp. hominis C80] Length = 200 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ V H H Sbjct: 60 LYG-MTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVGHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + D++ TFV Sbjct: 119 IEVDGKRVDIPSYALKPGQVISVREKSQNLDIIKESVEI-NNFVPEYLDFDADSLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200 >gi|150392132|ref|YP_001322181.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF] gi|171460826|sp|A6TWF4|RS4A_ALKMQ RecName: Full=30S ribosomal protein S4 A gi|149951994|gb|ABR50522.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF] Length = 207 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K + R++ PG HG RK +Y G+QLR Sbjct: 1 MARYTDAVCRLCRREGLKLYLKGERCYTDKCAITKRNFAPGQHGTSRKKLSNY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K++YG + E +FR F AD+ G+T NL+ LE+RLD +VYR + ARQ Sbjct: 60 KQKAKRFYGVL-ESQFRKYFDMADKQAGNTGENLLRILETRLDNLVYRLGLASSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H VNG V+I SY K GD + V +KS E + + VP +++V+ + Sbjct: 119 LVVHGHFTVNGGKVDIPSYLVKAGDAVAVSEKSTNSPKFKELKENFKGTVPTWLTVDSEK 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +PS +D+ P+ NL+VE YS+ Sbjct: 179 LEGKVAAMPSR-EDIDLPIS--ENLIVELYSK 207 >gi|187925591|ref|YP_001897233.1| 30S ribosomal protein S4 [Burkholderia phytofirmans PsJN] gi|226697818|sp|B2T726|RS4_BURPP RecName: Full=30S ribosomal protein S4 gi|187716785|gb|ACD18009.1| ribosomal protein S4 [Burkholderia phytofirmans PsJN] Length = 207 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ ++VNG NI S + K GDV+ V++ K+ A +LEA LAE+ +P +++V+ Sbjct: 117 QLVSHKAIVVNGVVSNIPSMQVKAGDVVAVRETKKKQARILEALSLAEQGGMPSWVAVDS 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + +L+VE YSR Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207 >gi|318607721|emb|CBY29219.1| SSU ribosomal protein S4p (S9e) [Yersinia enterocolitica subsp. palearctica Y11] Length = 206 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAIKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|270294726|ref|ZP_06200927.1| 30S ribosomal protein S4 [Bacteroides sp. D20] gi|270273973|gb|EFA19834.1| 30S ribosomal protein S4 [Bacteroides sp. D20] Length = 201 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 120/206 (58%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR++F++A+ ++G T L+ LE RLD IV+R PT AARQ V+H+H Sbjct: 60 TYG-ILEKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V+++SK L + + ++ + ++ V + Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ +L+VE YS+ Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201 >gi|22127884|ref|NP_671307.1| 30S ribosomal protein S4 [Yersinia pestis KIM 10] gi|45440091|ref|NP_991630.1| 30S ribosomal protein S4 [Yersinia pestis biovar Microtus str. 91001] gi|51597964|ref|YP_072155.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis IP 32953] gi|108809231|ref|YP_653147.1| 30S ribosomal protein S4 [Yersinia pestis Antiqua] gi|108813996|ref|YP_649763.1| 30S ribosomal protein S4 [Yersinia pestis Nepal516] gi|123444074|ref|YP_001008044.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|145597474|ref|YP_001161549.1| 30S ribosomal protein S4 [Yersinia pestis Pestoides F] gi|150260719|ref|ZP_01917447.1| 30S ribosomal protein S4 [Yersinia pestis CA88-4125] gi|153947510|ref|YP_001402839.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis IP 31758] gi|162420100|ref|YP_001605196.1| 30S ribosomal protein S4 [Yersinia pestis Angola] gi|165927897|ref|ZP_02223729.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str. F1991016] gi|166010539|ref|ZP_02231437.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. E1979001] gi|166213178|ref|ZP_02239213.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. B42003004] gi|167398630|ref|ZP_02304154.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419283|ref|ZP_02311036.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425684|ref|ZP_02317437.1| ribosomal protein S4 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022568|ref|YP_001719073.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis YPIII] gi|186897160|ref|YP_001874272.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis PB1/+] gi|218927439|ref|YP_002345314.1| 30S ribosomal protein S4 [Yersinia pestis CO92] gi|229836285|ref|ZP_04456452.1| 30S ribosomal subunit protein S4 [Yersinia pestis Pestoides A] gi|229840091|ref|ZP_04460250.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842173|ref|ZP_04462328.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis str. India 195] gi|229904527|ref|ZP_04519638.1| 30S ribosomal subunit protein S4 [Yersinia pestis Nepal516] gi|238752667|ref|ZP_04614138.1| 30S ribosomal protein S4 [Yersinia rohdei ATCC 43380] gi|238754196|ref|ZP_04615554.1| 30S ribosomal protein S4 [Yersinia ruckeri ATCC 29473] gi|238758784|ref|ZP_04619958.1| 30S ribosomal protein S4 [Yersinia aldovae ATCC 35236] gi|238783187|ref|ZP_04627213.1| 30S ribosomal protein S4 [Yersinia bercovieri ATCC 43970] gi|238797220|ref|ZP_04640721.1| 30S ribosomal protein S4 [Yersinia mollaretii ATCC 43969] gi|270488255|ref|ZP_06205329.1| ribosomal protein S4 [Yersinia pestis KIM D27] gi|294502308|ref|YP_003566370.1| 30S ribosomal protein S4 [Yersinia pestis Z176003] gi|332163237|ref|YP_004299814.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|26399435|sp|Q8ZJ88|RS4_YERPE RecName: Full=30S ribosomal protein S4 gi|61215490|sp|Q664U5|RS4_YERPS RecName: Full=30S ribosomal protein S4 gi|123245525|sp|Q1C2X0|RS4_YERPA RecName: Full=30S ribosomal protein S4 gi|123372820|sp|Q1CCW7|RS4_YERPN RecName: Full=30S ribosomal protein S4 gi|152112273|sp|A1JS02|RS4_YERE8 RecName: Full=30S ribosomal protein S4 gi|171769160|sp|A7FNL1|RS4_YERP3 RecName: Full=30S ribosomal protein S4 gi|172044482|sp|A4TH14|RS4_YERPP RecName: Full=30S ribosomal protein S4 gi|226703313|sp|B2K513|RS4_YERPB RecName: Full=30S ribosomal protein S4 gi|226703314|sp|A9R917|RS4_YERPG RecName: Full=30S ribosomal protein S4 gi|226703315|sp|B1JJG9|RS4_YERPY RecName: Full=30S ribosomal protein S4 gi|21961020|gb|AAM87558.1|AE014003_16 30S ribosomal subunit protein S4 [Yersinia pestis KIM 10] gi|45434946|gb|AAS60507.1| 30S ribosomal protein S4 [Yersinia pestis biovar Microtus str. 91001] gi|51591246|emb|CAH22912.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis IP 32953] gi|108777644|gb|ABG20163.1| SSU ribosomal protein S4P [Yersinia pestis Nepal516] gi|108781144|gb|ABG15202.1| SSU ribosomal protein S4P [Yersinia pestis Antiqua] gi|115346050|emb|CAL18916.1| 30S ribosomal protein S4 [Yersinia pestis CO92] gi|122091035|emb|CAL13918.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|145209170|gb|ABP38577.1| SSU ribosomal protein S4P [Yersinia pestis Pestoides F] gi|149290127|gb|EDM40204.1| 30S ribosomal protein S4 [Yersinia pestis CA88-4125] gi|152959005|gb|ABS46466.1| ribosomal protein S4 [Yersinia pseudotuberculosis IP 31758] gi|162352915|gb|ABX86863.1| ribosomal protein S4 [Yersinia pestis Angola] gi|165920173|gb|EDR37474.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str. F1991016] gi|165990629|gb|EDR42930.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. E1979001] gi|166205476|gb|EDR49956.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. B42003004] gi|166963277|gb|EDR59298.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051134|gb|EDR62542.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055374|gb|EDR65168.1| ribosomal protein S4 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749102|gb|ACA66620.1| ribosomal protein S4 [Yersinia pseudotuberculosis YPIII] gi|186700186|gb|ACC90815.1| ribosomal protein S4 [Yersinia pseudotuberculosis PB1/+] gi|229678645|gb|EEO74750.1| 30S ribosomal subunit protein S4 [Yersinia pestis Nepal516] gi|229690483|gb|EEO82537.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis str. India 195] gi|229696457|gb|EEO86504.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706353|gb|EEO92360.1| 30S ribosomal subunit protein S4 [Yersinia pestis Pestoides A] gi|238703081|gb|EEP95624.1| 30S ribosomal protein S4 [Yersinia aldovae ATCC 35236] gi|238707692|gb|EEQ00052.1| 30S ribosomal protein S4 [Yersinia ruckeri ATCC 29473] gi|238709094|gb|EEQ01341.1| 30S ribosomal protein S4 [Yersinia rohdei ATCC 43380] gi|238715983|gb|EEQ07969.1| 30S ribosomal protein S4 [Yersinia bercovieri ATCC 43970] gi|238718857|gb|EEQ10672.1| 30S ribosomal protein S4 [Yersinia mollaretii ATCC 43969] gi|262360388|gb|ACY57109.1| 30S ribosomal protein S4 [Yersinia pestis D106004] gi|262364338|gb|ACY60895.1| 30S ribosomal protein S4 [Yersinia pestis D182038] gi|270336759|gb|EFA47536.1| ribosomal protein S4 [Yersinia pestis KIM D27] gi|294352767|gb|ADE63108.1| 30S ribosomal protein S4 [Yersinia pestis Z176003] gi|320013366|gb|ADV96937.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Medievalis str. Harbin 35] gi|325667467|gb|ADZ44111.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861830|emb|CBX72001.1| 30S ribosomal protein S4 [Yersinia enterocolitica W22703] Length = 206 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|225873051|ref|YP_002754510.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196] gi|254764560|sp|C1F615|RS4_ACIC5 RecName: Full=30S ribosomal protein S4 gi|225792033|gb|ACO32123.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196] Length = 209 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K + R++ PG HG+ RK+K +GLQLR Sbjct: 1 MARYTGPVCRLCRREGMKLFLKGTKCFTDKCAIEKRNFAPGQHGRDRKAKIVGYGLQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ Y + E +FR +++A R+ G T LI LE RLD I +R F + ARQ Sbjct: 61 KQKAKRIYFTL-EGQFREYYEKASRAPGVTGELLIQQLECRLDNIAFRLGFATSRRQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H HV VNGR VNI S++ K GD I+++ S +L V A + P ++ V+H Sbjct: 120 IVRHGHVEVNGRKVNIPSFQVKVGDEIKIRPNSSKLVVVEMGRDFASGQPAPAWLQVDHA 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ V +P +DV PV L+VE YS+ Sbjct: 180 NLSGKVVSLPKR-EDVNLPV--NEQLIVELYSK 209 >gi|255011672|ref|ZP_05283798.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12] gi|313149508|ref|ZP_07811701.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12] gi|313138275|gb|EFR55635.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12] Length = 201 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQMLEGRLDNLVFRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G +I V+++SK L + + ++ + + V + Sbjct: 119 ITVDGQVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|153805982|ref|ZP_01958650.1| hypothetical protein BACCAC_00227 [Bacteroides caccae ATCC 43185] gi|149130659|gb|EDM21865.1| hypothetical protein BACCAC_00227 [Bacteroides caccae ATCC 43185] Length = 201 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G +I V+++SK L + + ++ + + V + Sbjct: 119 ITVDGEVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKML 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|281422226|ref|ZP_06253225.1| ribosomal protein S4 [Prevotella copri DSM 18205] gi|281403731|gb|EFB34411.1| ribosomal protein S4 [Prevotella copri DSM 18205] Length = 201 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F +A ++ G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFDKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G+ VNI S+ K G V+ V++KSK L + A +I + ++ F+ Sbjct: 119 IVVDGKVVNIPSFAVKPGMVVGVREKSKSLEVIEAALAGFNHSKYPWIEWDDNSKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|307565139|ref|ZP_07627647.1| 30S ribosomal protein S4 [Prevotella amnii CRIS 21A-A] gi|307346170|gb|EFN91499.1| 30S ribosomal protein S4 [Prevotella amnii CRIS 21A-A] Length = 201 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K ++ R++ PG HG R+ K S +G QL KQK K Sbjct: 1 MARYIGPKSRIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A +S G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNLFEKAAKSEGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG VNI SY K GDV+ V++K+K L + A ++ + + F+ Sbjct: 119 ITVNGNVVNIASYCVKTGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENAKAGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201 >gi|160888373|ref|ZP_02069376.1| hypothetical protein BACUNI_00786 [Bacteroides uniformis ATCC 8492] gi|317477726|ref|ZP_07936919.1| ribosomal protein S4 [Bacteroides sp. 4_1_36] gi|319900951|ref|YP_004160679.1| SSU ribosomal protein S4P [Bacteroides helcogenes P 36-108] gi|156862050|gb|EDO55481.1| hypothetical protein BACUNI_00786 [Bacteroides uniformis ATCC 8492] gi|316906071|gb|EFV27832.1| ribosomal protein S4 [Bacteroides sp. 4_1_36] gi|319415982|gb|ADV43093.1| SSU ribosomal protein S4P [Bacteroides helcogenes P 36-108] Length = 201 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A+ ++G T L+ LE RLD IV+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V+++SK L + + ++ + ++ V + Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ +L+VE YS+ Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201 >gi|197117349|ref|YP_002137776.1| 30S ribosomal protein S4 [Geobacter bemidjiensis Bem] gi|226699068|sp|B5EFS6|RS4_GEOBB RecName: Full=30S ribosomal protein S4 gi|197086709|gb|ACH37980.1| ribosomal protein S4 [Geobacter bemidjiensis Bem] Length = 208 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K + RSY PG HGQ R K S +G+QLR Sbjct: 1 MARYTGPSCRLCRREGSELFLKGERCYTDKCAIKRRSYPPGQHGQGR-IKVSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR F+ ADR +G T NL+ LE RLD + YR F + ARQ Sbjct: 60 KQKVRRIYG-ILENQFRGYFETADRMKGVTGENLLFILERRLDNVAYRLGFATSRDEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H +NG+ VNI S + K GDV+++++KS+++A++ E+ + + R +P+++ + D Sbjct: 119 LVRHGHFTLNGKKVNIPSLQVKAGDVLQLREKSRKVAAISESLEGVVRRGIPQWLELEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P +D+ P +Q L+VE YS+ Sbjct: 179 AFKGTVKAMPVR-EDITMP--IQEQLIVELYSK 208 >gi|255690029|ref|ZP_05413704.1| ribosomal protein S4 [Bacteroides finegoldii DSM 17565] gi|260624636|gb|EEX47507.1| ribosomal protein S4 [Bacteroides finegoldii DSM 17565] Length = 201 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G +I V+++SK L + + ++ + + V + Sbjct: 119 ITVDGEVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKML 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|50122927|ref|YP_052094.1| 30S ribosomal protein S4 [Pectobacterium atrosepticum SCRI1043] gi|227115248|ref|ZP_03828904.1| 30S ribosomal protein S4 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328925|ref|ZP_03832949.1| 30S ribosomal protein S4 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253690159|ref|YP_003019349.1| ribosomal protein S4 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|61215522|sp|Q6CZZ4|RS4_ERWCT RecName: Full=30S ribosomal protein S4 gi|259495287|sp|C6DFS4|RS4_PECCP RecName: Full=30S ribosomal protein S4 gi|49613453|emb|CAG76904.1| 30S ribosomal subunit protein S4 [Pectobacterium atrosepticum SCRI1043] gi|251756737|gb|ACT14813.1| ribosomal protein S4 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 206 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR V+I SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVSIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|313673441|ref|YP_004051552.1| SSU ribosomal protein s4p [Calditerrivibrio nitroreducens DSM 19672] gi|312940197|gb|ADR19389.1| SSU ribosomal protein S4P [Calditerrivibrio nitroreducens DSM 19672] Length = 208 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + K + + Y PG HGQ +K K S +G+QLR Sbjct: 1 MARYTGPSCKLCRREGMKLYLKGERCYKDKCGIEKKGYPPGQHGQLKK-KLSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG I E +FR F+ A +G T NL+ LE RLD VYRA F + ARQ Sbjct: 60 KQKVKRIYG-ILESQFRLYFERATNMKGITGENLLQLLERRLDNAVYRAGFASSRTQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNG+ VNI SY K GDVIE+++KS+ ++E+ + +E R E++S++ Sbjct: 119 LVRHNHFTVNGKKVNIPSYLLKVGDVIELREKSRDNKLIVESLETSEGRGTAEWLSIDKA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A R+P +Q +L+VE YS+ Sbjct: 179 AFKAVVNRLPERSD---IGYDIQEHLIVELYSK 208 >gi|149184798|ref|ZP_01863116.1| 30S ribosomal protein S4 [Erythrobacter sp. SD-21] gi|148832118|gb|EDL50551.1| 30S ribosomal protein S4 [Erythrobacter sp. SD-21] Length = 204 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 125/206 (60%), Positives = 161/206 (78%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRKSK S FGLQLRAKQK+K Sbjct: 1 MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKSKMSDFGLQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+ +KEA +GDT NLI LE RLD +VYRAKF PTIFAARQ V+H H Sbjct: 61 YYGDVTEKQFKRTYKEASAMKGDTGQNLIGLLEQRLDMVVYRAKFAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG NI S R + GDV+ + K+K++A V+EA L ER++P+Y++ + ++ T+ Sbjct: 121 IFLNGVKTNIASARVRVGDVVSLGSKAKEMALVIEAQSLPEREIPDYVAPDGND-KVTYN 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P L +VPYPV M+PNLVVEFYSR Sbjct: 180 RVP-KLDEVPYPVTMEPNLVVEFYSR 204 >gi|329298510|ref|ZP_08255846.1| 30S ribosomal protein S4 [Plautia stali symbiont] Length = 206 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKSVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|313204943|ref|YP_004043600.1| SSU ribosomal protein s4p [Paludibacter propionicigenes WB4] gi|312444259|gb|ADQ80615.1| SSU ribosomal protein S4P [Paludibacter propionicigenes WB4] Length = 201 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K + ++Y PG HGQ R+ K S +G+QLR KQK K Sbjct: 1 MARYIGPKSRIARKFGEAIFGPDK-VLAKKNYPPGQHGQGRRKKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+++++A R++G T L+ LESRLD IVYR F PT ARQ V+H+H Sbjct: 60 TYGVL-EKQFRNMYEKAQRTKGVTGEVLLQLLESRLDNIVYRLGFAPTRSGARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY + G VI V++K K + + + +I N ++ ++ Sbjct: 119 ITVDGKVVNIASYHVRAGQVIAVREKDKSMEVIAASLNGFNHSKYPWIEWNAASLSGVYL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ L+VE YS+ Sbjct: 179 HIPER---EDIPENIKEQLIVELYSK 201 >gi|297583620|ref|YP_003699400.1| 30S ribosomal protein S4 [Bacillus selenitireducens MLS10] gi|297142077|gb|ADH98834.1| ribosomal protein S4 [Bacillus selenitireducens MLS10] Length = 200 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K ++ R YGPG HG + K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LSKRPYGPGQHGPNSRRKVSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F ++F+ A + +G N + LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-MNERQFNTLFEAAGKLQGIHGENFMILLESRLDNLVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V V+G+ V+I SYR G I +++KS+ L V A ++ + +P Y+ + + + F Sbjct: 119 VTVDGKRVDIPSYRVAPGQSISLREKSRNLDVVKSAIEMNDF-LPSYLEFDAEKLEGKFA 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RYPERSE---LPAEINEQLIVEWYSR 200 >gi|46199603|ref|YP_005270.1| 30S ribosomal protein S4 [Thermus thermophilus HB27] gi|55981634|ref|YP_144931.1| 30S ribosomal protein S4 [Thermus thermophilus HB8] gi|7404455|sp|P80373|RS4_THET8 RecName: Full=30S ribosomal protein S4 gi|50401228|sp|P62664|RS4_THET2 RecName: Full=30S ribosomal protein S4 gi|10120567|pdb|1FKA|D Chain D, Structure Of Functionally Activated Small Ribosomal Subunit At 3.3 A Resolution gi|13399795|pdb|1HNW|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Tetracycline gi|13399817|pdb|1HNX|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Pactamycin gi|13399839|pdb|1HNZ|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Hygromycin B gi|14278059|pdb|1IBK|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotic Paromomycin gi|14278080|pdb|1IBL|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site And With The Antibiotic Paromomycin gi|14278104|pdb|1IBM|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site gi|58177403|pdb|1XMO|D Chain D, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed With Aag-Mrna In The Decoding Center gi|58177426|pdb|1XMQ|D Chain D, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The Decoding Center gi|58177467|pdb|1XNQ|D Chain D, Structure Of An Inosine-Adenine Wobble Base Pair Complex In The Context Of The Decoding Center gi|58177490|pdb|1XNR|D Chain D, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair In The Context Of The Decoding Center gi|66361057|pdb|1YL4|G Chain G, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. 30s Subunit. The Coordinates For The 50s Subunit Are In The Pdb Entry 1yl3 gi|88192239|pdb|2B64|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|88192302|pdb|2B9M|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400. gi|88192358|pdb|2B9O|D Chain D, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site. This File Contains The 30s Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site And Is Described In Remark 400. gi|116667657|pdb|2HHH|D Chain D, Crystal Structure Of Kasugamycin Bound To The 30s Ribosomal Subunit gi|116668200|pdb|2J00|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule I. gi|116668261|pdb|2J02|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4) This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule Ii. gi|119389715|pdb|2HGI|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgj. gi|119389772|pdb|2HGP|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgq. gi|119389828|pdb|2HGR|G Chain G, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgu. gi|149242711|pdb|2OW8|EE Chain e, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 2ow8, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsa. gi|149243621|pdb|2UU9|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gug-Codon In The A-Site And Paromomycin. gi|149243648|pdb|2UUA|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guc-Codon In The A-Site And Paromomycin. gi|149243675|pdb|2UUB|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guu-Codon In The A-Site And Paromomycin. gi|149243702|pdb|2UUC|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gua-Codon In The A-Site And Paromomycin. gi|149243841|pdb|2UXC|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Ucgu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836411|pdb|2UXB|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Gggu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836488|pdb|2V46|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 1. gi|157836544|pdb|2V48|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 3 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 2. gi|158430903|pdb|2UXD|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Cggg In The Context Of The Thermus Thermophilus 30s Subunit. gi|160285942|pdb|2QNH|EE Chain e, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 2qnh, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsp. gi|186972852|pdb|2VQE|D Chain D, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|186972875|pdb|2VQF|D Chain D, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|187609258|pdb|2ZKQ|DD Chain d, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map gi|209156499|pdb|3D5A|D Chain D, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156555|pdb|3D5C|D Chain D, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938822|pdb|2JL5|D Chain D, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938880|pdb|2JL7|D Chain D, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|218766776|pdb|3F1E|D Chain D, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766832|pdb|3F1G|D Chain D, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887377|pdb|2WDG|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887402|pdb|2WDH|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|226887491|pdb|2WDK|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887548|pdb|2WDM|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|237823532|pdb|2WH1|D Chain D, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823591|pdb|2WH3|D Chain D, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit. gi|260099989|pdb|3HUW|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule I. gi|260100045|pdb|3HUY|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule Ii. gi|261824487|pdb|2WRI|D Chain D, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 1 Of 4). gi|261824549|pdb|2WRK|D Chain D, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 3 Of 4). gi|261824611|pdb|2WRN|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 1 Of 4). gi|261824670|pdb|2WRQ|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 3 Of 4). gi|281307170|pdb|3KIQ|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 1 Of 4) gi|281307228|pdb|3KIS|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 3 Of 4) gi|281307286|pdb|3KIU|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 1 Of 4) gi|281307344|pdb|3KIX|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 3 Of 4) gi|288965607|pdb|3KNH|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526685|pdb|3KNJ|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii' gi|289526710|pdb|3KNL|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526735|pdb|3KNN|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii gi|294979507|pdb|3I8G|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979532|pdb|3I8H|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979591|pdb|3I9B|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B. The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979645|pdb|3I9D|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A. The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982078|pdb|2X9R|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982137|pdb|2X9T|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|307567965|pdb|2XFZ|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 1 Of 4) gi|307568023|pdb|2XG1|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 3 Of 4) gi|307776615|pdb|3OTO|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga Mutant Of Thermus Thermophilus (Hb8) gi|309320238|pdb|3OGE|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320259|pdb|3OGY|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320340|pdb|3OHC|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320361|pdb|3OHD|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320442|pdb|3OHY|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320493|pdb|3OI0|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320544|pdb|3OI2|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320595|pdb|3OI4|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207676|pdb|2XQD|D Chain D, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754002|pdb|2XSY|D Chain D, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754117|pdb|2XUY|D Chain D, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533405|pdb|2Y0U|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533464|pdb|2Y0W|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533523|pdb|2Y0Y|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533582|pdb|2Y10|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533641|pdb|2Y12|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533700|pdb|2Y14|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533759|pdb|2Y16|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533818|pdb|2Y18|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|4519422|dbj|BAA75548.1| ribosomal protein S4 [Thermus thermophilus] gi|46197229|gb|AAS81643.1| SSU ribosomal protein S4P [Thermus thermophilus HB27] gi|55773047|dbj|BAD71488.1| 30S ribosomal protein S4 [Thermus thermophilus HB8] Length = 209 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + PK + R Y PG HGQ+R +PS + ++LR Sbjct: 1 MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG ISE++FR++F+EA + +G T + LESRLD +VYR F + ARQ Sbjct: 61 KQKLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+ VNGR V++ SYR + GD I V +KS+ L + + + + R V ++S++ + Sbjct: 120 LVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F+R+P +D+ PV LV+EFYSR Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVIEFYSR 209 >gi|241763534|ref|ZP_04761586.1| ribosomal protein S4 [Acidovorax delafieldii 2AN] gi|241367265|gb|EER61605.1| ribosomal protein S4 [Acidovorax delafieldii 2AN] Length = 207 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 130/214 (60%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + KS +++ PG HG+ ++ S +GLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIADKSKFDSK---PGQHGRTSGARTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG I EK+FR F+ AD +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYG-ILEKQFRRYFEAADGRKGNTGANLLFLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GDV+ V++KSK+ + ++EA QL A+ +P ++ VN Sbjct: 117 QLVSHKAITVNGQSVNIPSYLVKVGDVVAVREKSKKQSRIVEALQLAAQVGMPAWVEVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D F ++P + + + +L+VE YSR Sbjct: 177 DKAEGIFKKVPDRDE---FGADINESLIVELYSR 207 >gi|311031300|ref|ZP_07709390.1| 30S ribosomal protein S4 [Bacillus sp. m3-13] Length = 200 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGVSLSGTGKE-LEKRPYAPGQHGPNQRRKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FRSIF A + +G N + LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-VNERQFRSIFDAAGKMQGKHGENFMILLESRLDNLVYRLGLARTRRGARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I S+R K G VI V++KS+ L+SV E+ ++ VPEY++ D + TF Sbjct: 119 ITVDGSRVDIPSFRVKPGQVIGVREKSRNLSSVKESVEV-NNFVPEYLTFTADALEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFYSR Sbjct: 178 RLPERSE---LAAEINEALIVEFYSR 200 >gi|295677907|ref|YP_003606431.1| ribosomal protein S4 [Burkholderia sp. CCGE1002] gi|295437750|gb|ADG16920.1| ribosomal protein S4 [Burkholderia sp. CCGE1002] Length = 207 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V H+ + VNG NI S + K GDV+ V+++ ++ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVGHKAITVNGVVTNIPSMQVKAGDVVAVREQKRKQARIIEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + +L+VE YSR Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207 >gi|58583182|ref|YP_202198.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625021|ref|YP_452393.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710856|ref|ZP_02242063.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575513|ref|YP_001912442.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae PXO99A] gi|75508108|sp|Q5GWV8|RS4_XANOR RecName: Full=30S ribosomal protein S4 gi|123521160|sp|Q2P008|RS4_XANOM RecName: Full=30S ribosomal protein S4 gi|226732182|sp|B2SQT3|RS4_XANOP RecName: Full=30S ribosomal protein S4 gi|58427776|gb|AAW76813.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368961|dbj|BAE70119.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519965|gb|ACD57910.1| ribosomal protein S4 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 208 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + + PG HG RK K S + QLR Sbjct: 1 MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGASRKGKLSDYATQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K+A +G+T NL+ LE+RLD + YR F T AAR Sbjct: 58 EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVCYRMGFAVTRPAAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171 Q V+HR VLVNG+SVN+ SY+ K GD I + +K+++ V EA +AE+ P ++ V+ Sbjct: 117 QLVSHRCVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEALTVAEQHDMTPSWVEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P P + L+VE YS+ Sbjct: 177 SKKFSGVFKAVPDRAD---LPSDINEALIVELYSK 208 >gi|16762867|ref|NP_458484.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144354|ref|NP_807696.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213027591|ref|ZP_03342038.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052884|ref|ZP_03345762.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425775|ref|ZP_03358525.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580697|ref|ZP_03362523.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612395|ref|ZP_03370221.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647330|ref|ZP_03377383.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289824201|ref|ZP_06543796.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25009212|sp|Q8Z1X4|RS4_SALTI RecName: Full=30S ribosomal protein S4 gi|25294504|pir||AI1008 30S ribosomal chain protein S4 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505174|emb|CAD09170.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Typhi] gi|29139992|gb|AAO71556.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 206 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIGQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ R P + +L+VE YS+ Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206 >gi|53720796|ref|YP_109782.1| 30S ribosomal protein S4 [Burkholderia pseudomallei K96243] gi|53723829|ref|YP_104141.1| 30S ribosomal protein S4 [Burkholderia mallei ATCC 23344] gi|67640848|ref|ZP_00439641.1| 30S ribosomal protein S4 [Burkholderia mallei GB8 horse 4] gi|76811379|ref|YP_335115.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1710b] gi|121601043|ref|YP_994431.1| 30S ribosomal protein S4 [Burkholderia mallei SAVP1] gi|124384949|ref|YP_001027920.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10229] gi|126439277|ref|YP_001060725.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 668] gi|126448998|ref|YP_001083015.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10247] gi|134283223|ref|ZP_01769924.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 305] gi|167001674|ref|ZP_02267466.1| 30S ribosomal protein S4 [Burkholderia mallei PRL-20] gi|167721552|ref|ZP_02404788.1| 30S ribosomal protein S4 [Burkholderia pseudomallei DM98] gi|167740526|ref|ZP_02413300.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 14] gi|167817731|ref|ZP_02449411.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 91] gi|167826128|ref|ZP_02457599.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 9] gi|167896212|ref|ZP_02483614.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 7894] gi|167904594|ref|ZP_02491799.1| 30S ribosomal protein S4 [Burkholderia pseudomallei NCTC 13177] gi|167912859|ref|ZP_02499950.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 112] gi|167920818|ref|ZP_02507909.1| 30S ribosomal protein S4 [Burkholderia pseudomallei BCC215] gi|226198240|ref|ZP_03793811.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pakistan 9] gi|237814120|ref|YP_002898571.1| ribosomal protein S4 [Burkholderia pseudomallei MSHR346] gi|254175265|ref|ZP_04881926.1| 30S ribosomal protein S4 [Burkholderia mallei ATCC 10399] gi|254180364|ref|ZP_04886962.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1655] gi|254190327|ref|ZP_04896835.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pasteur 52237] gi|254198547|ref|ZP_04904968.1| 30S ribosomal protein S4 [Burkholderia pseudomallei S13] gi|254201214|ref|ZP_04907578.1| 30S ribosomal protein S4 [Burkholderia mallei FMH] gi|254206555|ref|ZP_04912906.1| 30S ribosomal protein S4 [Burkholderia mallei JHU] gi|254260076|ref|ZP_04951130.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1710a] gi|254300601|ref|ZP_04968046.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 406e] gi|61215450|sp|Q62GN0|RS4_BURMA RecName: Full=30S ribosomal protein S4 gi|61215463|sp|Q63Q36|RS4_BURPS RecName: Full=30S ribosomal protein S4 gi|90101678|sp|Q3JMT8|RS4_BURP1 RecName: Full=30S ribosomal protein S4 gi|171769469|sp|A1V878|RS4_BURMS RecName: Full=30S ribosomal protein S4 gi|171769829|sp|A2S7K1|RS4_BURM9 RecName: Full=30S ribosomal protein S4 gi|171855085|sp|A3MRX9|RS4_BURM7 RecName: Full=30S ribosomal protein S4 gi|171855116|sp|A3NEF4|RS4_BURP6 RecName: Full=30S ribosomal protein S4 gi|52211210|emb|CAH37199.1| 30S ribosomal protein S4 [Burkholderia pseudomallei K96243] gi|52427252|gb|AAU47845.1| ribosomal protein S4 [Burkholderia mallei ATCC 23344] gi|76580832|gb|ABA50307.1| ribosomal protein S4 [Burkholderia pseudomallei 1710b] gi|121229853|gb|ABM52371.1| 30S ribosomal protein S4 [Burkholderia mallei SAVP1] gi|124292969|gb|ABN02238.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10229] gi|126218770|gb|ABN82276.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 668] gi|126241868|gb|ABO04961.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10247] gi|134245418|gb|EBA45511.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 305] gi|147747108|gb|EDK54184.1| 30S ribosomal protein S4 [Burkholderia mallei FMH] gi|147752097|gb|EDK59163.1| 30S ribosomal protein S4 [Burkholderia mallei JHU] gi|157810528|gb|EDO87698.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 406e] gi|157938003|gb|EDO93673.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pasteur 52237] gi|160696310|gb|EDP86280.1| 30S ribosomal protein S4 [Burkholderia mallei ATCC 10399] gi|169655287|gb|EDS87980.1| 30S ribosomal protein S4 [Burkholderia pseudomallei S13] gi|184210903|gb|EDU07946.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1655] gi|225929760|gb|EEH25776.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pakistan 9] gi|237504346|gb|ACQ96664.1| ribosomal protein S4 [Burkholderia pseudomallei MSHR346] gi|238521643|gb|EEP85093.1| 30S ribosomal protein S4 [Burkholderia mallei GB8 horse 4] gi|243062571|gb|EES44757.1| 30S ribosomal protein S4 [Burkholderia mallei PRL-20] gi|254218765|gb|EET08149.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1710a] Length = 207 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + K GDV+ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207 >gi|319787902|ref|YP_004147377.1| ribosomal protein S4 [Pseudoxanthomonas suwonensis 11-1] gi|317466414|gb|ADV28146.1| ribosomal protein S4 [Pseudoxanthomonas suwonensis 11-1] Length = 208 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + + PG HG RK K S + QLR Sbjct: 1 MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGAARKGKLSDYATQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K+A +G+T NL+ LE+RLD +VYR F T +AR Sbjct: 58 EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPSAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171 Q V+HR VLVNG+ VN+ SY+ K GD I + +K+++ V EA +AE+ P +I V+ Sbjct: 117 QLVSHRGVLVNGKPVNLPSYQVKAGDSIALSEKAQKQLRVQEALTVAEQHDMTPSWIEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P P + L+VE YS+ Sbjct: 177 AKKFAGVFKAVPDRAD---LPADINEALIVELYSK 208 >gi|311277749|ref|YP_003939980.1| ribosomal protein S4 [Enterobacter cloacae SCF1] gi|308746944|gb|ADO46696.1| ribosomal protein S4 [Enterobacter cloacae SCF1] Length = 206 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ K DV+ V++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206 >gi|304399266|ref|ZP_07381132.1| ribosomal protein S4 [Pantoea sp. aB] gi|308188332|ref|YP_003932463.1| 30S ribosomal protein S4 [Pantoea vagans C9-1] gi|304353192|gb|EFM17573.1| ribosomal protein S4 [Pantoea sp. aB] gi|308058842|gb|ADO11014.1| 30S ribosomal protein S4 [Pantoea vagans C9-1] Length = 206 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ VLVNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKSVLVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|254456438|ref|ZP_05069867.1| ribosomal protein S4 [Candidatus Pelagibacter sp. HTCC7211] gi|207083440|gb|EDZ60866.1| ribosomal protein S4 [Candidatus Pelagibacter sp. HTCC7211] Length = 205 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 122/206 (59%), Positives = 158/206 (76%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR +SKHK+DRR+ NLWGRPKSP NTR+YGPG HGQ R+ KPS +G+QL+AKQK+K Sbjct: 1 MTKRLNSKHKVDRRLKVNLWGRPKSPFNTRAYGPGQHGQSRQGKPSDYGIQLQAKQKLKA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+I+E++FR+I+K+A +GDT NLI LE RLD ++YRAKF TIF+ARQ +NH H Sbjct: 61 YYGNINERQFRNIYKKAVMLKGDTGENLIGLLERRLDAVIYRAKFATTIFSARQLINHNH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNIGSY KE D IE++ KSKQLA + A ER+ PEYI ++ N FV Sbjct: 121 VRVNGKKVNIGSYLVKEEDSIEIRDKSKQLAIIDIALANKEREAPEYIQMDEKNKKFKFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P ++VPYP++M+PNLV+E+YSR Sbjct: 181 RTP-KFEEVPYPIVMEPNLVIEYYSR 205 >gi|188535254|ref|YP_001909051.1| 30S ribosomal protein S4 [Erwinia tasmaniensis Et1/99] gi|300718681|ref|YP_003743484.1| 30S ribosomal protein S4 [Erwinia billingiae Eb661] gi|226699063|sp|B2VK72|RS4_ERWT9 RecName: Full=30S ribosomal protein S4 gi|188030296|emb|CAO98185.1| 30S ribosomal protein S4 [Erwinia tasmaniensis Et1/99] gi|299064517|emb|CAX61637.1| 30S ribosomal protein S4 [Erwinia billingiae Eb661] Length = 206 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRTYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR V+I SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKSIMVNGRVVSIASYQVTPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|83592040|ref|YP_425792.1| 30S ribosomal protein S4 [Rhodospirillum rubrum ATCC 11170] gi|90101712|sp|Q2RWJ0|RS4_RHORT RecName: Full=30S ribosomal protein S4 gi|83574954|gb|ABC21505.1| SSU ribosomal protein S4P [Rhodospirillum rubrum ATCC 11170] Length = 204 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M KR +SKHKIDRR+G NLWGRPKSP+N R YGPG HGQRR+ KPS FG+QL AKQK+K Sbjct: 1 MGKRLNSKHKIDRRLGVNLWGRPKSPINKREYGPGEHGQRRR-KPSDFGIQLMAKQKLKG 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+ISEK FR ++EA RGDTS NLIS LE+RLD +VYR K VPT+F++RQ +NH H Sbjct: 60 YYGNISEKAFRKYYEEASSRRGDTSENLISILETRLDAVVYRMKIVPTVFSSRQIINHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR V++ SYR +EGDVIEVK+KS+Q+ +LEA Q ERD+PEYI+++ + TF+ Sbjct: 120 ILVNGRRVSVASYRVQEGDVIEVKEKSRQMPLILEALQSHERDIPEYITMDLAHAKGTFL 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P L+DVPYPV M+PNLVVEFYSR Sbjct: 180 RAP-KLEDVPYPVQMEPNLVVEFYSR 204 >gi|37528520|ref|NP_931865.1| 30S ribosomal protein S4 [Photorhabdus luminescens subsp. laumondii TTO1] gi|41017820|sp|Q7MYH4|RS4_PHOLL RecName: Full=30S ribosomal protein S4 gi|36787958|emb|CAE17075.1| 30S ribosomal protein S4 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 206 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+S LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLSLLEGRLDNVVYRMGFGATRAESRQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ V++KSK+ + + A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQREKPTWLEVDAVKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERAD---LSADINEHLIVELYSK 206 >gi|160883039|ref|ZP_02064042.1| hypothetical protein BACOVA_01002 [Bacteroides ovatus ATCC 8483] gi|237717425|ref|ZP_04547906.1| 30S ribosomal protein S4 [Bacteroides sp. D1] gi|237718717|ref|ZP_04549198.1| 30S ribosomal protein S4 [Bacteroides sp. 2_2_4] gi|260175442|ref|ZP_05761854.1| 30S ribosomal protein S4 [Bacteroides sp. D2] gi|262406190|ref|ZP_06082740.1| ribosomal protein S4 [Bacteroides sp. 2_1_22] gi|293372094|ref|ZP_06618485.1| ribosomal protein S4 [Bacteroides ovatus SD CMC 3f] gi|294644083|ref|ZP_06721860.1| ribosomal protein S4 [Bacteroides ovatus SD CC 2a] gi|294806543|ref|ZP_06765382.1| ribosomal protein S4 [Bacteroides xylanisolvens SD CC 1b] gi|298483090|ref|ZP_07001271.1| ribosomal protein S4 [Bacteroides sp. D22] gi|299144598|ref|ZP_07037666.1| ribosomal protein S4 [Bacteroides sp. 3_1_23] gi|315923671|ref|ZP_07919911.1| 30S ribosomal protein S4 [Bacteroides sp. D2] gi|156111511|gb|EDO13256.1| hypothetical protein BACOVA_01002 [Bacteroides ovatus ATCC 8483] gi|229443408|gb|EEO49199.1| 30S ribosomal protein S4 [Bacteroides sp. D1] gi|229451849|gb|EEO57640.1| 30S ribosomal protein S4 [Bacteroides sp. 2_2_4] gi|262357065|gb|EEZ06155.1| ribosomal protein S4 [Bacteroides sp. 2_1_22] gi|292632886|gb|EFF51473.1| ribosomal protein S4 [Bacteroides ovatus SD CMC 3f] gi|292640607|gb|EFF58848.1| ribosomal protein S4 [Bacteroides ovatus SD CC 2a] gi|294446238|gb|EFG14866.1| ribosomal protein S4 [Bacteroides xylanisolvens SD CC 1b] gi|295085403|emb|CBK66926.1| SSU ribosomal protein S4P [Bacteroides xylanisolvens XB1A] gi|298270834|gb|EFI12414.1| ribosomal protein S4 [Bacteroides sp. D22] gi|298515089|gb|EFI38970.1| ribosomal protein S4 [Bacteroides sp. 3_1_23] gi|313697546|gb|EFS34381.1| 30S ribosomal protein S4 [Bacteroides sp. D2] Length = 201 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI S+ K G +I V+++SK L + + ++ + + V + Sbjct: 119 ITVDGEVVNIPSFAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKML 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|317503955|ref|ZP_07961963.1| 30S ribosomal protein S4 [Prevotella salivae DSM 15606] gi|315664981|gb|EFV04640.1| 30S ribosomal protein S4 [Prevotella salivae DSM 15606] Length = 201 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LE RLD +VYR PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLECRLDNVVYRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI S+ K G V+ V++KSK L + A +I + + F+ Sbjct: 119 ITVDGKVVNIPSFAVKPGMVVAVREKSKSLEVIEAALAGFNHSKYPWIEWDDNAKCGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|305665112|ref|YP_003861399.1| 30S ribosomal protein S4 [Maribacter sp. HTCC2170] gi|88709864|gb|EAR02096.1| 30S ribosomal protein S4 [Maribacter sp. HTCC2170] Length = 201 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 89/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS +SY PG HGQ RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKSKIARKFGEAIFGDDKS-FEKKSYPPGQHGQNRRRGKKSEYAVQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR++F A+RS+G T L+ ESRLD +VYR + ARQ V+HR Sbjct: 60 YTYG-ILEKQFRNLFASANRSKGVTGEVLLQLCESRLDNVVYRMGVSTSRRGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK L ++ +A A V E+I+ N + TF Sbjct: 119 HITVNGELVNIPSYSLKAGDVVGVREKSKSLQTIEDALS-ASGHVYEWITWNSEKKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P ++ P ++ L+VE YS+ Sbjct: 178 VSVPERMQ---IPENIKEQLIVELYSK 201 >gi|152972204|ref|YP_001337350.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206575742|ref|YP_002236302.1| ribosomal protein S4 [Klebsiella pneumoniae 342] gi|238896793|ref|YP_002921538.1| 30S ribosomal protein S4 [Klebsiella pneumoniae NTUH-K2044] gi|262045155|ref|ZP_06018182.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288933290|ref|YP_003437349.1| ribosomal protein S4 [Klebsiella variicola At-22] gi|290512092|ref|ZP_06551460.1| 30S ribosomal protein S4 [Klebsiella sp. 1_1_55] gi|330002271|ref|ZP_08304265.1| ribosomal protein S4 [Klebsiella sp. MS 92-3] gi|172052444|sp|A6TEU9|RS4_KLEP7 RecName: Full=30S ribosomal protein S4 gi|226699076|sp|B5XNB5|RS4_KLEP3 RecName: Full=30S ribosomal protein S4 gi|150957053|gb|ABR79083.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206564800|gb|ACI06576.1| ribosomal protein S4 [Klebsiella pneumoniae 342] gi|238549120|dbj|BAH65471.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037475|gb|EEW38719.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288888019|gb|ADC56337.1| ribosomal protein S4 [Klebsiella variicola At-22] gi|289775882|gb|EFD83882.1| 30S ribosomal protein S4 [Klebsiella sp. 1_1_55] gi|328537344|gb|EGF63594.1| ribosomal protein S4 [Klebsiella sp. MS 92-3] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ K DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206 >gi|157372753|ref|YP_001480742.1| 30S ribosomal protein S4 [Serratia proteamaculans 568] gi|172047788|sp|A8GKH4|RS4_SERP5 RecName: Full=30S ribosomal protein S4 gi|157324517|gb|ABV43614.1| ribosomal protein S4 [Serratia proteamaculans 568] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKASLELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRMPERTD---LSADINEHLIVELYSK 206 >gi|189465443|ref|ZP_03014228.1| hypothetical protein BACINT_01796 [Bacteroides intestinalis DSM 17393] gi|224537842|ref|ZP_03678381.1| hypothetical protein BACCELL_02729 [Bacteroides cellulosilyticus DSM 14838] gi|189437717|gb|EDV06702.1| hypothetical protein BACINT_01796 [Bacteroides intestinalis DSM 17393] gi|224520528|gb|EEF89633.1| hypothetical protein BACCELL_02729 [Bacteroides cellulosilyticus DSM 14838] Length = 201 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A+ ++G T L+ LE RLD IV+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI S+ K G VI V+++SK L + + ++ + ++ V + Sbjct: 119 ITVDGEVVNIPSFAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ +L+VE YS+ Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201 >gi|167838187|ref|ZP_02465046.1| 30S ribosomal protein S4 [Burkholderia thailandensis MSMB43] Length = 207 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + K GDV+ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVVSIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207 >gi|16080018|ref|NP_390844.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str. 168] gi|221315235|ref|ZP_03597040.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320153|ref|ZP_03601447.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324434|ref|ZP_03605728.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312503|ref|YP_004204790.1| 30S ribosomal protein S4 [Bacillus subtilis BSn5] gi|133949|sp|P21466|RS4_BACSU RecName: Full=30S ribosomal protein S4; Short=BS4 gi|143467|gb|AAA22717.1| ribosomal protein S4 [Bacillus subtilis] gi|2293319|gb|AAC00397.1| ribosomal protein S4 [Bacillus subtilis] gi|2635450|emb|CAB14944.1| ribosomal protein S4 (BS4) [Bacillus subtilis subsp. subtilis str. 168] gi|291485397|dbj|BAI86472.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. natto BEST195] gi|320018777|gb|ADV93763.1| 30S ribosomal protein S4 [Bacillus subtilis BSn5] Length = 200 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + L+SRLD +VY+ T ARQ VNH H Sbjct: 60 MYG-VNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I SY K G I V++KS+ L+ + E+ ++ VPEY++ + + + TF Sbjct: 119 ILVDGSRVDIPSYLVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200 >gi|217424827|ref|ZP_03456324.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 576] gi|217392283|gb|EEC32308.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 576] Length = 207 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG NI S + + GDV+ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKAITVNGIVANIPSQQVRAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207 >gi|119773378|ref|YP_926118.1| 30S ribosomal protein S4 [Shewanella amazonensis SB2B] gi|152112259|sp|A1S242|RS4_SHEAM RecName: Full=30S ribosomal protein S4 gi|119765878|gb|ABL98448.1| SSU ribosomal protein S4P [Shewanella amazonensis SB2B] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE+RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ V+VNGR VNI S++ DV+ +++KS+ A + A + A+R+ P ++ V+ M Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206 >gi|16766705|ref|NP_462320.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56415335|ref|YP_152410.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181921|ref|YP_218338.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161506031|ref|YP_001573143.1| 30S ribosomal protein S4 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|168264703|ref|ZP_02686676.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168468027|ref|ZP_02701864.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194445278|ref|YP_002042667.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447938|ref|YP_002047440.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472917|ref|ZP_03078901.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734012|ref|YP_002116359.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247634|ref|YP_002148336.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262156|ref|ZP_03162230.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198244329|ref|YP_002217379.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387686|ref|ZP_03214298.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931411|ref|ZP_03222080.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354956|ref|YP_002228757.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858658|ref|YP_002245309.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238913869|ref|ZP_04657706.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|3914907|sp|O54297|RS4_SALTY RecName: Full=30S ribosomal protein S4 gi|62287196|sp|Q5PK09|RS4_SALPA RecName: Full=30S ribosomal protein S4 gi|75505522|sp|Q57J55|RS4_SALCH RecName: Full=30S ribosomal protein S4 gi|189045396|sp|A9MN71|RS4_SALAR RecName: Full=30S ribosomal protein S4 gi|226695074|sp|B4TXB9|RS4_SALSV RecName: Full=30S ribosomal protein S4 gi|226699114|sp|B5F7S2|RS4_SALA4 RecName: Full=30S ribosomal protein S4 gi|226699115|sp|B5FJJ1|RS4_SALDC RecName: Full=30S ribosomal protein S4 gi|226699116|sp|B5R1F3|RS4_SALEP RecName: Full=30S ribosomal protein S4 gi|226699117|sp|B5RH39|RS4_SALG2 RecName: Full=30S ribosomal protein S4 gi|226699118|sp|B4TJY6|RS4_SALHS RecName: Full=30S ribosomal protein S4 gi|226699119|sp|B4SUR7|RS4_SALNS RecName: Full=30S ribosomal protein S4 gi|2780215|emb|CAA11203.1| ribosomal protein S4 [Salmonella typhimurium] gi|16421972|gb|AAL22279.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129592|gb|AAV79098.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129554|gb|AAX67257.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|160867378|gb|ABX24001.1| hypothetical protein SARI_04212 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|194403941|gb|ACF64163.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406242|gb|ACF66461.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459281|gb|EDX48120.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709514|gb|ACF88735.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195628917|gb|EDX48327.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211337|gb|ACH48734.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240411|gb|EDY23031.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938845|gb|ACH76178.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604784|gb|EDZ03329.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319839|gb|EDZ05049.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274737|emb|CAR39793.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205346870|gb|EDZ33501.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710461|emb|CAR34819.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248573|emb|CBG26411.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995625|gb|ACY90510.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159959|emb|CBW19478.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914439|dbj|BAJ38413.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087861|emb|CBY97624.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615043|gb|EFY11967.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617330|gb|EFY14231.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625552|gb|EFY22377.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626394|gb|EFY23203.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632094|gb|EFY28847.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635027|gb|EFY31750.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643272|gb|EFY39839.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646644|gb|EFY43151.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649990|gb|EFY46409.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652707|gb|EFY49047.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659536|gb|EFY55780.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665522|gb|EFY61709.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670416|gb|EFY66555.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670489|gb|EFY66623.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675065|gb|EFY71148.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681602|gb|EFY77631.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685946|gb|EFY81935.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716407|gb|EFZ07978.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131774|gb|ADX19204.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195816|gb|EFZ80989.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196428|gb|EFZ81579.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202333|gb|EFZ87378.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207318|gb|EFZ92268.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211246|gb|EFZ96091.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216045|gb|EGA00776.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223464|gb|EGA07792.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226806|gb|EGA10996.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231832|gb|EGA15942.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233215|gb|EGA17310.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237282|gb|EGA21347.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245517|gb|EGA29516.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249023|gb|EGA32945.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250646|gb|EGA34527.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256875|gb|EGA40589.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263024|gb|EGA46571.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266024|gb|EGA49519.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272781|gb|EGA56184.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625160|gb|EGE31505.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630105|gb|EGE36448.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ R P + +L+VE YS+ Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206 >gi|152986119|ref|YP_001346247.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa PA7] gi|171460894|sp|A6UZL2|RS4_PSEA7 RecName: Full=30S ribosomal protein S4 gi|150961277|gb|ABR83302.1| ribosomal protein S4 [Pseudomonas aeruginosa PA7] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HGQ R+ + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQ-RRGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++EA R +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQEASRRKGSTGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ K GDV+ +++KS+ + +A +L +R E++ V+ D Sbjct: 119 SHKAITVNGQTVNIPSYQVKAGDVVAIREKSRNQLRIAQALELCGQRGRVEWVEVDLDKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P+ + NL+VE YS+ Sbjct: 179 TGTFKSVPARSD---LSADINENLIVELYSK 206 >gi|315178982|gb|ADT85896.1| 30S ribosomal protein S4 [Vibrio furnissii NCTC 11218] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S+ DV+ +++K+K+ + + A ++AE R+ P +I V+ +M Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDASSM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206 >gi|319778700|ref|YP_004129613.1| SSU ribosomal protein S4p (S9e) [Taylorella equigenitalis MCE9] gi|317108724|gb|ADU91470.1| SSU ribosomal protein S4p (S9e) [Taylorella equigenitalis MCE9] Length = 207 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + P++++ PG HG+ ++ S +G QLR KQ Sbjct: 1 MARYTGPKCKLSRREGIDLFLKSARRPLDSKCKFESKPGQHGRTSGARTSDYGTQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T ARQ V Sbjct: 61 KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H + +NG+ +I S GDV+ V++KSK + ++ +LAE PE++SV Sbjct: 120 SHGAIELNGKKADIPSMIVNAGDVVSVREKSKGQIRIKDSLELAESLSFPEWVSVEPKEF 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 180 KGTFKQVPDRAD---VARDINESLIVELYSR 207 >gi|197364265|ref|YP_002143902.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|226695073|sp|B5BGW2|RS4_SALPK RecName: Full=30S ribosomal protein S4 gi|197095742|emb|CAR61312.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQISPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ R P + +L+VE YS+ Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206 >gi|281423813|ref|ZP_06254726.1| ribosomal protein S4 [Prevotella oris F0302] gi|281402040|gb|EFB32871.1| ribosomal protein S4 [Prevotella oris F0302] Length = 201 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI S+ K G VI V++KSK L + A +I + ++ F+ Sbjct: 119 ITVDGKVVNIPSFAVKPGMVIAVREKSKSLEVIEAALAGFNHSKYPWIEWDDNSKCGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|209521361|ref|ZP_03270074.1| ribosomal protein S4 [Burkholderia sp. H160] gi|209498181|gb|EDZ98323.1| ribosomal protein S4 [Burkholderia sp. H160] Length = 207 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V H+ + VNG NI S + K GDV+ V+++ ++ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVGHKAITVNGVVSNIPSMQVKAGDVVAVREQKRKQARIIEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + +L+VE YSR Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207 >gi|157377427|ref|YP_001476027.1| 30S ribosomal protein S4 [Shewanella sediminis HAW-EB3] gi|189045400|sp|A8G1C6|RS4_SHESH RecName: Full=30S ribosomal protein S4 gi|157319801|gb|ABV38899.1| ribosomal protein S4 [Shewanella sediminis HAW-EB3] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 130/211 (61%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R++G+T NL++ LE+RLD +VYR F T ARQ V Sbjct: 60 KVRRTYGVL-EKQFRNYYKDAARTKGNTGENLLTLLETRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNG VNI S++ DVI +++KSK+ A ++ A ++A +R+ P ++ V++ M Sbjct: 119 SHKSIMVNGSVVNIPSFKVSANDVISIREKSKKQARIIAALEVASQREKPTWVEVDNTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206 >gi|317494318|ref|ZP_07952732.1| ribosomal protein S4 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917568|gb|EFV38913.1| ribosomal protein S4 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNGR VNI SY+ DV+ V++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAVVVNGRVVNIASYQVSPNDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + +L+VE YS+ Sbjct: 179 EGVFKRNPERSD---LSADINEHLIVELYSK 206 >gi|121603259|ref|YP_980588.1| 30S ribosomal protein S4 [Polaromonas naphthalenivorans CJ2] gi|152112243|sp|A1VJ39|RS4_POLNA RecName: Full=30S ribosomal protein S4 gi|120592228|gb|ABM35667.1| SSU ribosomal protein S4P [Polaromonas naphthalenivorans CJ2] Length = 207 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S +GLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSISDKAKFDSK---PGQHGRTSGTRTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+EADR RG+T NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEEADRRRGNTGANLLSVLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GDVI V+ KSK+ + EA +LA++ +P ++ VN Sbjct: 117 QLVSHKAMTVNGQSVNIPSYMVKAGDVIAVRDKSKKQTRIAEALELAKQVGLPAWVDVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D TF ++P + + + +L+VE YSR Sbjct: 177 DKGEGTFKKVPDRDE---FAADINESLIVELYSR 207 >gi|225010541|ref|ZP_03701012.1| ribosomal protein S4 [Flavobacteria bacterium MS024-3C] gi|225005370|gb|EEG43321.1| ribosomal protein S4 [Flavobacteria bacterium MS024-3C] Length = 201 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI RR GE ++G KS R++ PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARRFGEAIFGEDKS-FEKRNFPPGQHGNNRRRGKESEYKVQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR+IF +A+RS+G T L+ F ESRLD +VYR + ARQ V+HR Sbjct: 60 YTYG-ILEKQFRNIFAKANRSKGVTGEVLLQFCESRLDNVVYRMGVSTSRSGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK L ++ +A ++ +V E+I+ N + M +F Sbjct: 119 HITVNGSIVNIPSYSLKAGDVVGVREKSKSLQTISDALSVSS-NVYEWITWNSEKMEGSF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P L+ P ++ L+VE YS+ Sbjct: 178 VAVPERLQ---IPENIKEQLIVELYSK 201 >gi|15615771|ref|NP_244075.1| 30S ribosomal protein S4 [Bacillus halodurans C-125] gi|26399508|sp|Q9K7Z8|RS4_BACHD RecName: Full=30S ribosomal protein S4 gi|10175832|dbj|BAB06928.1| 30S ribosomal protein S4 [Bacillus halodurans C-125] Length = 200 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPTWKISRRLGISLSGTGKE-LQKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR IF +A + G N + LESRLD +VYR T AARQ VNH H Sbjct: 60 MYG-VNERQFRRIFNDAGKMAGIHGENFMILLESRLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SYR K G VI V++KS+ L + E+ + + VP Y++ + D + T+ Sbjct: 119 ITVDGQRVDIPSYRVKPGQVIGVREKSRNLQVIKESLESNDF-VPAYVTFDADKLEGTYS 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VEFYSR Sbjct: 178 RFPERSE---LPAEITEALIVEFYSR 200 >gi|325856044|ref|ZP_08171933.1| ribosomal protein S4 [Prevotella denticola CRIS 18C-A] gi|327313216|ref|YP_004328653.1| 30S ribosomal protein S4 [Prevotella denticola F0289] gi|325483716|gb|EGC86680.1| ribosomal protein S4 [Prevotella denticola CRIS 18C-A] gi|326946115|gb|AEA22000.1| ribosomal protein S4 [Prevotella denticola F0289] Length = 201 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K + +++ PG HG R+ K S +G QL KQK K Sbjct: 1 MARYIGPKSRIARRFGEPIFGADK-VLAKKNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F +A ++ G T L+ LESRLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-ERQFRNLFDKAAKADGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNG V I SY+ K GDV+ V++K+K L + A ++ + + F+ Sbjct: 119 IVVNGNVVGIASYQVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENAKCGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201 >gi|258512643|ref|YP_003186077.1| 30S ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479369|gb|ACV59688.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 208 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K V+ R Y PG HGQ RK Y G+QLR Sbjct: 1 MARYTGPVCRLCRREGIKLYLKGERCFSEKCAVDKRPYAPGQHGQGRKRTTEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++YYG + E +F ++EA R RG T L+ LESRLD +VYR F + ARQ Sbjct: 60 KQKARRYYGVL-ENQFERYYEEAARRRGVTGETLLQLLESRLDNVVYRLGFAASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+ VNGR V+I S+ KEGDV+ V++KS+ A + E ++L R +P ++ ++ + Sbjct: 119 LVRHGHIQVNGRRVDIPSFLVKEGDVVSVREKSRDNARLKELAELIPSRTIPAWLELDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N A +R P+ + +Q +VEFYSR Sbjct: 179 NWTAKVLRRPARDE---IDAPVQEQQIVEFYSR 208 >gi|253701896|ref|YP_003023085.1| 30S ribosomal protein S4 [Geobacter sp. M21] gi|259495281|sp|C6E4N1|RS4_GEOSM RecName: Full=30S ribosomal protein S4 gi|251776746|gb|ACT19327.1| ribosomal protein S4 [Geobacter sp. M21] Length = 208 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K + RSY PG HGQ R K S +G+QLR Sbjct: 1 MARYTGPSCRLCRREGSELFLKGERCYTDKCAIKRRSYPPGQHGQGR-IKVSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR F+ ADR +G T NL+ LE RLD + YR F + ARQ Sbjct: 60 KQKVRRIYG-ILENQFRGYFETADRMKGVTGENLLFILERRLDNVAYRLGFATSRDEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H +NGR VNI S + K GDV+++++KS+++A++ E+ + + R +P+++ + D Sbjct: 119 LVRHGHFTLNGRKVNIPSLQVKAGDVLQLREKSRKVAAISESLEGVVRRGIPQWLELEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P +D+ P +Q L+VE YS+ Sbjct: 179 AFKGTVKAMPVR-EDITMP--IQEQLIVELYSK 208 >gi|226953895|ref|ZP_03824359.1| 30S ribosomal protein S4 [Acinetobacter sp. ATCC 27244] gi|294651610|ref|ZP_06728914.1| 30S ribosomal protein S4 [Acinetobacter haemolyticus ATCC 19194] gi|226835378|gb|EEH67761.1| 30S ribosomal protein S4 [Acinetobacter sp. ATCC 27244] gi|292822459|gb|EFF81358.1| 30S ribosomal protein S4 [Acinetobacter haemolyticus ATCC 19194] Length = 208 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHNKAPGQHGQARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRSEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P ++ V+H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMEVDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208 >gi|29348111|ref|NP_811614.1| 30S ribosomal protein S4 [Bacteroides thetaiotaomicron VPI-5482] gi|253569617|ref|ZP_04847027.1| 30S ribosomal protein S4 [Bacteroides sp. 1_1_6] gi|298386205|ref|ZP_06995762.1| ribosomal protein S4 [Bacteroides sp. 1_1_14] gi|41017839|sp|Q8A4A1|RS4_BACTN RecName: Full=30S ribosomal protein S4 gi|29340014|gb|AAO77808.1| 30S ribosomal protein S4 [Bacteroides thetaiotaomicron VPI-5482] gi|251841636|gb|EES69717.1| 30S ribosomal protein S4 [Bacteroides sp. 1_1_6] gi|298261433|gb|EFI04300.1| ribosomal protein S4 [Bacteroides sp. 1_1_14] Length = 201 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A ++G T L+ LE RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI S+ K G +I V+++SK L + + ++ + + V + Sbjct: 119 ITVDGEVVNIPSFAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDETSKVGKML 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|289550525|ref|YP_003471429.1| SSU ribosomal protein S4p (S9e) [Staphylococcus lugdunensis HKU09-01] gi|315658019|ref|ZP_07910892.1| 30S ribosomal protein S4 [Staphylococcus lugdunensis M23590] gi|289180057|gb|ADC87302.1| SSU ribosomal protein S4p (S9e) [Staphylococcus lugdunensis HKU09-01] gi|315496909|gb|EFU85231.1| 30S ribosomal protein S4 [Staphylococcus lugdunensis M23590] Length = 200 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +G+QLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGMQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ V H H Sbjct: 60 LYG-MTERQFRNTFDIAAKQYGVHGENFMILLASRLDAVVYALGLARTRRQARQLVGHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+GR V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + DN+ TFV Sbjct: 119 IEVDGRRVDIPSYSLKPGQVITVREKSQNLDIIKESVEI-NNFVPEYLDFDADNLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|73542839|ref|YP_297359.1| 30S ribosomal protein S4 [Ralstonia eutropha JMP134] gi|90101711|sp|Q46WG8|RS4_RALEJ RecName: Full=30S ribosomal protein S4 gi|72120252|gb|AAZ62515.1| SSU ribosomal protein S4P [Ralstonia eutropha JMP134] Length = 207 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGEKLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDVI ++++SK+ + EA LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQTLNVPSAQIKSGDVITIREQSKKQVRIAEALSLAEQSGFPTWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPDRAD---ISGDINESLIVELYSR 207 >gi|118579144|ref|YP_900394.1| 30S ribosomal protein S4 [Pelobacter propionicus DSM 2379] gi|152112242|sp|A1ALW6|RS4_PELPD RecName: Full=30S ribosomal protein S4 gi|118501854|gb|ABK98336.1| SSU ribosomal protein S4P [Pelobacter propionicus DSM 2379] Length = 208 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + R+Y PG HGQ R +Y G+QLR Sbjct: 1 MARYTGPSCRLCRRENMELFLKGDRCYTDKCAIKRRNYPPGQHGQGRTKNSAY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR F EADR +G T NL+S LE RLD +VYR F + +RQ Sbjct: 60 KQKVRRIYG-LMENQFRGYFAEADRMKGVTGENLLSLLERRLDNVVYRLGFASSRSESRQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NG+ V+I S + + GDVIE+++KS+++ S+ +A A R +P+++ ++ D Sbjct: 119 LVRHGHFTLNGKKVDIPSIQTRVGDVIELREKSRKIVSINDALDAVARRGIPQWLELDRD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +DV P +Q LVVE YS+ Sbjct: 179 AFKGNLKALPVR-EDVTTP--IQEQLVVELYSK 208 >gi|325287073|ref|YP_004262863.1| 30S ribosomal protein S4 [Cellulophaga lytica DSM 7489] gi|324322527|gb|ADY29992.1| ribosomal protein S4 [Cellulophaga lytica DSM 7489] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS ++Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGEDKS-FEKKNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR++F +A+ S+G T L+ ESRLD +VYR + ARQ V+HR Sbjct: 60 YSYG-ILEKQFRNLFAKANSSKGVTGEVLLQLCESRLDNVVYRMGISNSRRGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK L+++ +A R V E+I+ N + T+ Sbjct: 119 HITVNGELVNIPSYSLKPGDVVGVREKSKSLSAIQDALAANSR-VYEWITWNSEKKEGTY 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V IP V P ++ L+VE YS+ Sbjct: 178 VSIPER---VQIPENIKEQLIVELYSK 201 >gi|152977022|ref|YP_001376539.1| 30S ribosomal protein S4 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|171769250|sp|A7GTT6|RS4_BACCN RecName: Full=30S ribosomal protein S4 gi|152025774|gb|ABS23544.1| ribosomal protein S4 [Bacillus cytotoxicus NVH 391-98] Length = 200 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS+ LA + EA ++ VPEY++ + D + ATF Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSRNLAVIKEAMEV-NNFVPEYLTFDADKLEATFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200 >gi|300690185|ref|YP_003751180.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum PSI07] gi|299077245|emb|CBJ49871.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum PSI07] Length = 207 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T +L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGESLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQVKAGDVVAIREKSKKQVRIAESLSLAEQTGFPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF + P + +L+VE YSR Sbjct: 177 KKMEGTFKQAPDRAD---IAGDINESLIVELYSR 207 >gi|295135677|ref|YP_003586353.1| 30S ribosomal protein S4 [Zunongwangia profunda SM-A87] gi|294983692|gb|ADF54157.1| 30S ribosomal protein S4 [Zunongwangia profunda SM-A87] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR++F++A RS+G T L+ ESRLD +V+R P+ AARQ V+HR Sbjct: 60 YTYG-ILERQFRNMFEKATRSQGITGEVLLQLCESRLDNVVFRLGVAPSRRAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY+ K GDV+ V++KSK L V ++ +V E+I+ N++ TF Sbjct: 119 HITVNGELVNIPSYQLKAGDVVGVREKSKSLQVVQDSLA-NNSNVYEWITWNNETKQGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P V P + +VE YS+ Sbjct: 178 VSVPGR---VQIPENINEQFIVELYSK 201 >gi|53803440|ref|YP_114764.1| 30S ribosomal protein S4 [Methylococcus capsulatus str. Bath] gi|61215442|sp|Q605D6|RS4_METCA RecName: Full=30S ribosomal protein S4 gi|53757201|gb|AAU91492.1| ribosomal protein S4 [Methylococcus capsulatus str. Bath] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + + ++ PG HGQ+R Y QLR KQ Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSRGKSLESKCKLDQPPGQHGQKRPRLSDYAA-QLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ + EA R +G T NL++ LESRLD +VYR F T ARQ V Sbjct: 60 KLRRIYG-IMERQFRNYYAEASRRKGSTGENLLTLLESRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + +NGR++NI SY+ + GDV+E++ K+K V +A Q+ E+ P ++ V+ +M Sbjct: 119 SHKAINLNGRTLNIPSYQVQSGDVVEIRDKAKSQGRVKDALQVTEQYGFPSWVDVDVKSM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F P + + LVVE YS+ Sbjct: 179 KGIFKSAPERSE---LGSDINEQLVVELYSK 206 >gi|261823208|ref|YP_003261314.1| 30S ribosomal protein S4 [Pectobacterium wasabiae WPP163] gi|261607221|gb|ACX89707.1| ribosomal protein S4 [Pectobacterium wasabiae WPP163] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR V+I SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVSIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + +L+VE YS+ Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206 >gi|126454036|ref|YP_001068009.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106a] gi|167847640|ref|ZP_02473148.1| 30S ribosomal protein S4 [Burkholderia pseudomallei B7210] gi|242314939|ref|ZP_04813955.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106b] gi|171855208|sp|A3P088|RS4_BURP0 RecName: Full=30S ribosomal protein S4 gi|126227678|gb|ABN91218.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106a] gi|242138178|gb|EES24580.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106b] Length = 207 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ V VNG NI S + K GDV+ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 117 QLVSHKAVTVNGIVANIPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207 >gi|299065440|emb|CBJ36609.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum CMR15] Length = 207 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKSGDVVTIREKSKKQVRIAESLSLAEQTGFPGWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF + P + +L+VE YSR Sbjct: 177 KKMEGTFKQAPDRAD---IAGDINESLIVELYSR 207 >gi|32034695|ref|ZP_00134833.1| COG0522: Ribosomal protein S4 and related proteins [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209247|ref|YP_001054472.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae L20] gi|165977220|ref|YP_001652813.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151138|ref|YP_001969663.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250036|ref|ZP_07336238.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253210|ref|ZP_07339359.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246713|ref|ZP_07528783.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307251082|ref|ZP_07533006.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253468|ref|ZP_07535339.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255698|ref|ZP_07537502.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257882|ref|ZP_07539638.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260150|ref|ZP_07541860.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307264487|ref|ZP_07546072.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|322515611|ref|ZP_08068590.1| 30S ribosomal protein S4 [Actinobacillus ureae ATCC 25976] gi|152060927|sp|A3N381|RS4_ACTP2 RecName: Full=30S ribosomal protein S4 gi|226697792|sp|B3GZ35|RS4_ACTP7 RecName: Full=30S ribosomal protein S4 gi|226697793|sp|B0BSV5|RS4_ACTPJ RecName: Full=30S ribosomal protein S4 gi|126098039|gb|ABN74867.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877321|gb|ABY70369.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916269|gb|ACE62521.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647892|gb|EFL78099.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651099|gb|EFL81253.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852413|gb|EFM84648.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856912|gb|EFM89044.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859147|gb|EFM91189.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861375|gb|EFM93365.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863612|gb|EFM95539.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865796|gb|EFM97674.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306870184|gb|EFN01943.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|322118321|gb|EFX90596.1| 30S ribosomal protein S4 [Actinobacillus ureae ATCC 25976] Length = 208 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E++FR+ + EA+R +G+T NL+ LE RLD +VYR F T ARQ Sbjct: 60 KQKVRRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V+H+ ++VNGR VNI SY+ DV+ V++KSK+ A + + +LA +R+ P ++ V+ Sbjct: 119 LVSHKSIVVNGRVVNIPSYQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDAT 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F R P + +L+VE YS+ Sbjct: 179 KMEGVFKRTPERSD---LSADINEHLIVELYSK 208 >gi|300728417|ref|ZP_07061779.1| ribosomal protein S4 [Prevotella bryantii B14] gi|299774336|gb|EFI70966.1| ribosomal protein S4 [Prevotella bryantii B14] Length = 202 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K ++ R++ PG HG R+ K S +G QL KQK K Sbjct: 1 MARYIGPKSRIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKQSEYGAQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F +A +S G T L+ LESRLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-ERQFRNMFDKAAKSDGITGEVLLQELESRLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SY K G VI V++K+K L + A +I + + F+ Sbjct: 119 IVVDGAVVNIPSYSVKPGQVIGVREKAKSLEVIEGALAGFNHSKYPWIEWDENTKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HRPERAD---IPENIKEQLIVELYSK 201 >gi|312968379|ref|ZP_07782589.1| ribosomal protein S4 [Escherichia coli 2362-75] gi|312287204|gb|EFR15114.1| ribosomal protein S4 [Escherichia coli 2362-75] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VN R VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNDRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206 >gi|323492143|ref|ZP_08097305.1| 30S ribosomal protein S4 [Vibrio brasiliensis LMG 20546] gi|323313704|gb|EGA66806.1| 30S ribosomal protein S4 [Vibrio brasiliensis LMG 20546] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VNI S++ DV+ +++K+KQ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKAILVNGKVVNIPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDGGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206 >gi|243180|gb|AAB21091.1| ribosomal protein S4 [Bacillus stearothermophilus, Peptide, 198 aa] Length = 198 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++ KI RR+G +L G K + R Y PG HG ++ Y GLQL+ KQK++ Sbjct: 1 ARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRKLSEY-GLQLQEKQKLRHM 58 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++FR F+EA + G N + LESRLD +VYR T ARQ V H H+ Sbjct: 59 YG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGHI 117 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181 +V+G VNI SYR K G I V++KS+ L + EA + A +P+Y+S + + M T+ R Sbjct: 118 IVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLSFDPEKMEGTYTR 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + P + L+VEFYSR Sbjct: 177 LPERSE---LPAEINEALIVEFYSR 198 >gi|288929314|ref|ZP_06423159.1| ribosomal protein S4 [Prevotella sp. oral taxon 317 str. F0108] gi|288329416|gb|EFC68002.1| ribosomal protein S4 [Prevotella sp. oral taxon 317 str. F0108] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKTSEYGAMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKASGITGEVLLQNLESRLDNVVFRLGLAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G+ VNI SY K G V+ V++K+K L + A +I + + F+ Sbjct: 119 IVVDGKVVNIPSYSVKAGQVVGVREKAKSLEVIEAALAGFNHSKYPWIEWDDASKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|304384301|ref|ZP_07366712.1| 30S ribosomal protein S4 [Prevotella marshii DSM 16973] gi|304334617|gb|EFM00899.1| 30S ribosomal protein S4 [Prevotella marshii DSM 16973] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLESRLDNVVFRMGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G+ VNI SY K G VI V++KSK L + EA +I ++++ F+ Sbjct: 119 IVVDGQVVNIPSYAVKPGQVIGVREKSKSLEVIEEALAGFNHSKYPWIEWDNNSKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPESIKEQLIVELYSK 201 >gi|322831096|ref|YP_004211123.1| ribosomal protein S4 [Rahnella sp. Y9602] gi|321166297|gb|ADW71996.1| ribosomal protein S4 [Rahnella sp. Y9602] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD ++YR F T +RQ V Sbjct: 60 KVRRTYGVL-ERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVIYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + +L+VE YS+ Sbjct: 179 EGVFKRMPERTD---LSSDINEHLIVELYSK 206 >gi|91786410|ref|YP_547362.1| 30S ribosomal protein S4 [Polaromonas sp. JS666] gi|123060350|sp|Q12G78|RS4_POLSJ RecName: Full=30S ribosomal protein S4 gi|91695635|gb|ABE42464.1| SSU ribosomal protein S4P [Polaromonas sp. JS666] Length = 207 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S FGLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRAISDKAKFDSK---PGQHGRTSGTRTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEEADRRKGNTGANLLFILESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG SVNI SY K GDVI V+ KSK+ V EA +LA++ +P ++ VN Sbjct: 117 QLVSHKAITVNGNSVNIPSYMVKTGDVIAVRDKSKKQTRVTEALELAKQVGLPAWVDVNA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D F ++P + + + +L+VE YSR Sbjct: 177 DKGEGVFKKVPDRDE---FAADVNESLIVELYSR 207 >gi|309782859|ref|ZP_07677579.1| ribosomal protein S4 [Ralstonia sp. 5_7_47FAA] gi|308918283|gb|EFP63960.1| ribosomal protein S4 [Ralstonia sp. 5_7_47FAA] Length = 207 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDVI +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKTGDVIAIREKSKKQVRIAESLTLAEQTGFPTWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF +IP + +L+VE YSR Sbjct: 177 KKMEGTFKQIPDRAD---IAGDINESLIVELYSR 207 >gi|311748488|ref|ZP_07722273.1| ribosomal protein S4 [Algoriphagus sp. PR1] gi|126577005|gb|EAZ81253.1| ribosomal protein S4 [Algoriphagus sp. PR1] Length = 201 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE + G K + ++Y PG HG+ R+ K S + +QL KQK K Sbjct: 1 MARYTGPKAKIARKFGEPIEGHSK-ALQKKNYPPGQHGRGRRKKQSEYAIQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I E++F +F A R G T NL+ LE+RLD VYR PT ARQ V+H+H Sbjct: 60 IYG-ILERQFAKMFDIASRKSGITGENLLQLLEARLDNTVYRMGISPTRRGARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG VNI SY K GD++ V+++SK L ++ + + ++ + ++ FV Sbjct: 119 ILVNGELVNIPSYSLKPGDIVSVRERSKSLEAITNSLAGRGANKYSWLEWDGASLSGKFV 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS P ++ L+VE YS+ Sbjct: 179 SVPSRDD---IPENVKEQLIVELYSK 201 >gi|89902965|ref|YP_525436.1| 30S ribosomal protein S4 [Rhodoferax ferrireducens T118] gi|122478015|sp|Q21QP8|RS4_RHOFD RecName: Full=30S ribosomal protein S4 gi|89347702|gb|ABD71905.1| SSU ribosomal protein S4P [Rhodoferax ferrireducens T118] Length = 207 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 132/214 (61%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S FGLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIGDKAKFDSK---PGQHGRTSGARTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+EADR +G+T NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEEADRRKGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GD+I V+ KSK+ ++EA QLA++ +P ++ +N Sbjct: 117 QLVSHKAMTVNGKSVNIPSYMVKAGDMIAVRDKSKKQNRIVEALQLAQQVGMPAWVEINA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF +P + + + +L+VE YSR Sbjct: 177 EKAEGTFKAVPDRDQ---FAADVNESLIVELYSR 207 >gi|300702805|ref|YP_003744406.1| 30S ribosomal protein S4 [Ralstonia solanacearum CFBP2957] gi|299070467|emb|CBJ41762.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum CFBP2957] Length = 207 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 128/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGANLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKAGDVVAIREKSKKQVRIAESLSLAEQSGFPTWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF + P V + +L+VE YSR Sbjct: 177 KKMEGTFKQAPDR---VDIAGDINESLIVELYSR 207 >gi|302388739|ref|YP_003824560.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646] gi|302199367|gb|ADL06937.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646] Length = 208 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + PK ++ R Y PG HGQ ++ Y GLQLR Sbjct: 1 MARYTGPVCRLCRREGMKLYLKGERCYTPKCAIDRRGYAPGQHGQMKRKLSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E++F+ F+EA R +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKAKRIYGVL-ERQFKIYFEEAIRRKGVTGENLLRLLECRLDNVVYRLGFAKSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+ VNGR V I SY+ +E DVI V++KS+ L E ++ + R VPE++SVN+D Sbjct: 119 IVRHGHIEVNGRKVTIPSYQVREKDVIAVREKSRSLDFFKEMAEAGKGRIVPEWLSVNYD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + VR+P+ V +Q +L+VE YS+ Sbjct: 179 TLTGEVVRMPNR---EDIDVPIQEHLIVELYSK 208 >gi|126666789|ref|ZP_01737766.1| ribosomal protein S4 [Marinobacter sp. ELB17] gi|126628834|gb|EAZ99454.1| ribosomal protein S4 [Marinobacter sp. ELB17] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALDTKCNLETPPGMHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LE+RLD + YR F T RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGVTGENLLQLLEARLDNVAYRMGFGSTRAECRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVN + VNI SY+ K GDV+ V++K+K V A LA R ++ V+ M Sbjct: 119 SHKAILVNDKVVNIPSYQVKPGDVVSVREKAKNQLRVKGALDLASGRAAVSWVDVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ ++ P + NL+VE YS+ Sbjct: 179 SGVYSSVPTRIE---LPADINENLIVELYSK 206 >gi|170728985|ref|YP_001763011.1| 30S ribosomal protein S4 [Shewanella woodyi ATCC 51908] gi|226695076|sp|B1KM36|RS4_SHEWM RecName: Full=30S ribosomal protein S4 gi|169814332|gb|ACA88916.1| ribosomal protein S4 [Shewanella woodyi ATCC 51908] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 129/211 (61%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R++G+T NL++ LE+RLD +VYR F T ARQ V Sbjct: 60 KVRRTYGVL-EKQFRNYYKDAARTKGNTGENLLTLLETRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ ++VNG VNI S++ DVI +++KSK+ A ++ A + ++R+ P ++ V++ M Sbjct: 119 SHKSIMVNGSVVNIPSFKVSANDVISIREKSKKQARIIAALEVSSQREKPTWVEVDNTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206 >gi|283788068|ref|YP_003367933.1| 30S ribosomal subunit protein S4 [Citrobacter rodentium ICC168] gi|282951522|emb|CBG91221.1| 30S ribosomal subunit protein S4 [Citrobacter rodentium ICC168] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ R P + +L+VE YS+ Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206 >gi|223042027|ref|ZP_03612208.1| 30S ribosomal protein S4 [Actinobacillus minor 202] gi|240948151|ref|ZP_04752554.1| 30S ribosomal protein S4 [Actinobacillus minor NM305] gi|198246529|gb|ACH82221.1| 30S ribosomal protein S4 [Actinobacillus minor 202] gi|240297504|gb|EER48011.1| 30S ribosomal protein S4 [Actinobacillus minor NM305] Length = 208 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E++FR+ +KEA+R +G+T NL+ LE RLD +VYR F T ARQ Sbjct: 60 KQKVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V+H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LA +R+ P ++ V+ Sbjct: 119 LVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDAT 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F R P + +L+VE YS+ Sbjct: 179 KMEGVFKRTPERSD---LSADINEHLIVELYSK 208 >gi|241664507|ref|YP_002982867.1| 30S ribosomal protein S4 [Ralstonia pickettii 12D] gi|240866534|gb|ACS64195.1| ribosomal protein S4 [Ralstonia pickettii 12D] Length = 207 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDVI +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKTGDVIAIREKSKKQVRIAESLTLAEQTGFPTWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF ++P + +L+VE YSR Sbjct: 177 KKMEGTFKQVPDRAD---IAGDINESLIVELYSR 207 >gi|10835588|pdb|1FJG|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin gi|13096397|pdb|1HR0|D Chain D, Crystal Structure Of Initiation Factor If1 Bound To The 30s Ribosomal Subunit gi|14278013|pdb|1GIX|G Chain G, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1gix, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826123|pdb|1JGO|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File, 1jgo, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826148|pdb|1JGP|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File, 1jgp, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826173|pdb|1JGQ|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File, 1jgq, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|28373702|pdb|1ML5|G Chain G, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|110591326|pdb|2F4V|D Chain D, 30s Ribosome + Designer Antibiotic Length = 209 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + PK + R Y PG HGQ+R +PS + ++LR Sbjct: 1 MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG ISE++FR++F+EA + +G T + LESRLD +VYR F + ARQ Sbjct: 61 KQKLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+ VNGR V++ SYR + GD I V +KS+ L + + + + R V ++S++ + Sbjct: 120 LVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F+R+P +D+ PV Q NLV+EFYSR Sbjct: 180 GMKGKFLRLPDR-EDLALPV--QENLVIEFYSR 209 >gi|163786165|ref|ZP_02180613.1| 30S ribosomal protein S4 [Flavobacteriales bacterium ALC-1] gi|159878025|gb|EDP72081.1| 30S ribosomal protein S4 [Flavobacteriales bacterium ALC-1] Length = 201 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ G+ ++G K R+Y PG HG +R+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGQAIFGDDK-AFEKRNYPPGQHGANKRRGKKSEYAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++FK A ++G T L+ ESRLD +V+R PT ARQ V+HR Sbjct: 60 YTYGVL-EKQFRNMFKRATAAQGITGEVLLQLCESRLDNVVFRMGVSPTRSGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VN+ SY+ K GDV+ V++KSK L ++ + + +V E+I+ N+D M T+ Sbjct: 119 HITVNGEKVNVPSYQLKAGDVVGVREKSKSLEAITNSLANSS-NVYEWITWNNDTMEGTY 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P+ + P + +VE YS+ Sbjct: 178 VSVPAR---IQIPEQINEQFIVELYSK 201 >gi|221064828|ref|ZP_03540933.1| ribosomal protein S4 [Comamonas testosteroni KF-1] gi|220709851|gb|EED65219.1| ribosomal protein S4 [Comamonas testosteroni KF-1] Length = 207 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 131/214 (61%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +T+ PG HG+ + S +GLQLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSIADKAKFDTK---PGQHGRTSGQRTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ ADR RG+T NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAADRKRGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172 Q V+H+ + VNG+SVNI SY KEGDV+ +++KSK+ A V+EA QL A+ P ++ V+ Sbjct: 117 QLVSHKAITVNGQSVNIPSYSVKEGDVVALREKSKKQARVVEALQLAAQVGFPAWVEVSA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D TF + P + + + +L+VE YSR Sbjct: 177 DKAEGTFKKSPDRDE---FAADINESLIVELYSR 207 >gi|261342766|ref|ZP_05970624.1| ribosomal protein S4 [Enterobacter cancerogenus ATCC 35316] gi|288314945|gb|EFC53883.1| ribosomal protein S4 [Enterobacter cancerogenus ATCC 35316] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ K DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206 >gi|20808633|ref|NP_623804.1| 30S ribosomal protein S4 [Thermoanaerobacter tengcongensis MB4] gi|26399396|sp|Q8R7Y1|RS4_THETN RecName: Full=30S ribosomal protein S4 gi|20517267|gb|AAM25408.1| Ribosomal protein S4 and related proteins [Thermoanaerobacter tengcongensis MB4] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + K P+ R Y PG HGQ +K Y G+QLR Sbjct: 1 MGRYLGPSCRLCRREGIKLYLKGEKCYTDKCPLAKRGYAPGQHGQEKKKLTQY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+YYG I E++F ++ A+R RG T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKLKRYYG-ILERQFVRYYERAERMRGITGENLLQLLERRLDNVVYRLGFAVSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V+H H+ VNG+ V+I SY K GDVI VK+ S+ + + ++ R+VP+++ +N D Sbjct: 119 LVSHGHIEVNGKKVDIPSYLVKPGDVISVKESSRSMELIKNNLEMG-RNVPDWLELNKDA 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + + PV Q +L+VE YS+ Sbjct: 178 FEGRVVSLP-RREHIDLPV--QEHLIVELYSK 206 >gi|163752126|ref|ZP_02159331.1| 30S ribosomal protein S4 [Shewanella benthica KT99] gi|161327961|gb|EDP99136.1| 30S ribosomal protein S4 [Shewanella benthica KT99] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 129/211 (61%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLDTAPGQHGA-RKTRLSEYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL++ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARQKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNG VNI S++ DVI +++KSK+ A ++ A ++A +R+ P ++ V++ M Sbjct: 119 SHKSIMVNGSVVNIPSFKVSASDVICIREKSKKQARIVAALEVASQREKPTWVEVDNTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206 >gi|282878783|ref|ZP_06287551.1| ribosomal protein S4 [Prevotella buccalis ATCC 35310] gi|281299174|gb|EFA91575.1| ribosomal protein S4 [Prevotella buccalis ATCC 35310] Length = 201 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S FG L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEFGAMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A +S G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKSDGITGEVLLQNLECRLDNVVFRMGIAPTRAAARQMVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SY K G ++ V++K+K L + + +I + ++ F+ Sbjct: 119 IVVDGSVVNIPSYAVKPGQIVGVREKAKSLEVIEASLAGFNHSKYPWIEWDENSKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ L+VE YS+ Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201 >gi|260909776|ref|ZP_05916470.1| 30S ribosomal protein S4 [Prevotella sp. oral taxon 472 str. F0295] gi|260636201|gb|EEX54197.1| 30S ribosomal protein S4 [Prevotella sp. oral taxon 472 str. F0295] Length = 201 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKTSEYGAMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKASGITGEVLLQNLESRLDNVVFRLGLAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G+ VNI SY K G ++ V++K+K L + A +I + + F+ Sbjct: 119 IVVDGKVVNIPSYSVKAGQIVGVREKAKSLEVIEAALAGFNHSKYPWIEWDDASKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|167587747|ref|ZP_02380135.1| 30S ribosomal protein S4 [Burkholderia ubonensis Bu] Length = 207 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG N+ S + K GDVI +++K+K+ A ++EA LAE+ + +++V+ Sbjct: 117 QLVSHKAITVNGIVANVPSQQVKAGDVIAIREKAKKQARIVEALSLAEQGGLASWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207 >gi|258625764|ref|ZP_05720643.1| 30S ribosomal protein S4 [Vibrio mimicus VM603] gi|261211127|ref|ZP_05925416.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC341] gi|262170491|ref|ZP_06038169.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus MB-451] gi|262401859|ref|ZP_06078424.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC586] gi|258582002|gb|EEW06872.1| 30S ribosomal protein S4 [Vibrio mimicus VM603] gi|260839628|gb|EEX66239.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC341] gi|261891567|gb|EEY37553.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus MB-451] gi|262351831|gb|EEZ00962.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC586] Length = 206 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S+ DV+ +++K+K+ + + A ++AE R+ P +I V+ + M Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDVNTM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206 >gi|258406160|ref|YP_003198902.1| 30S ribosomal protein S4 [Desulfohalobium retbaense DSM 5692] gi|257798387|gb|ACV69324.1| ribosomal protein S4 [Desulfohalobium retbaense DSM 5692] Length = 208 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ SK ++ RR GE L+ + K R+Y PG HG+ RK KPS + +QLR Sbjct: 1 MARYTESKCRLCRREGEKLFLKGDRCYTDKCAFERRAYPPGQHGRMRK-KPSDYAIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR+ FK+A+ +G T NL+ LE+RLD +VYR F + ARQ Sbjct: 60 KQKVRRLYG-ILENQFRNYFKKAEAQKGVTGTNLLRLLETRLDNVVYRLGFANSREQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H +NGR VNI S + +EGD IEV+++S+++ + EA + +A R PE++ V+ Sbjct: 119 LVRHGHFELNGRRVNIPSLQVREGDAIEVRERSRKVPAFQEAQEVIARRGCPEWLEVDSA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P +DV +P + L+VE YS+ Sbjct: 179 AFKGAIKAQPQR-EDVTFP--INEQLIVELYSK 208 >gi|226313743|ref|YP_002773637.1| 30S ribosomal protein S4 [Brevibacillus brevis NBRC 100599] gi|254764572|sp|C0ZHK9|RS4_BREBN RecName: Full=30S ribosomal protein S4 gi|226096691|dbj|BAH45133.1| 30S ribosomal protein S4 [Brevibacillus brevis NBRC 100599] Length = 199 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 121/206 (58%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +HK+ RR+G +L G K R++ PG HG + K S +G+QL+ KQK++ Sbjct: 1 MSRYTGPRHKLARRLGISLDGTGKDI--KRNFPPGQHGHNNRRKLSEYGIQLQEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G ++EK+FR F A + G N + LESRLD +VYR F PT AARQ VNH H Sbjct: 59 MFG-LNEKQFRRTFDNASKMAGVVGENFMKLLESRLDNLVYRMGFAPTRPAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 LVNG+ VNI SYR + GDVI +++KS+ L + +A + +P Y++ N TF Sbjct: 118 FLVNGKKVNIPSYRVQPGDVISIREKSRGLQLIKDALE-GRTFLPNYVTFNDAAAEGTFT 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 177 RLPDREE---MPAEINEVLIVEFYSR 199 >gi|17547713|ref|NP_521115.1| 30S ribosomal protein S4 [Ralstonia solanacearum GMI1000] gi|26399428|sp|Q8XV37|RS4_RALSO RecName: Full=30S ribosomal protein S4 gi|17430018|emb|CAD16703.1| probable 30s ribosomal protein s4 [Ralstonia solanacearum GMI1000] Length = 207 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKSGDVVAIREKSKKQVRIAESLSLAEQTGFPGWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF + P + +L+VE YSR Sbjct: 177 KKMEGTFKQAPDRGD---IAGDINESLIVELYSR 207 >gi|242242984|ref|ZP_04797429.1| 30S ribosomal protein S4 [Staphylococcus epidermidis W23144] gi|242233585|gb|EES35897.1| 30S ribosomal protein S4 [Staphylococcus epidermidis W23144] gi|319401032|gb|EFV89251.1| ribosomal protein S4 [Staphylococcus epidermidis FRI909] Length = 200 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + DN+ TFV Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQDLDIIKESVEI-NNFVPEYLDFDADNLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|299141173|ref|ZP_07034310.1| ribosomal protein S4 [Prevotella oris C735] gi|298577133|gb|EFI49002.1| ribosomal protein S4 [Prevotella oris C735] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI S+ K G VI V++KSK L + A +I + ++ F+ Sbjct: 119 ITVDGKVVNIPSFAVKPGMVIAVREKSKSLEVIEVALAGFNHSKYPWIEWDDNSKCGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|27364191|ref|NP_759719.1| 30S ribosomal protein S4 [Vibrio vulnificus CMCP6] gi|37678582|ref|NP_933191.1| 30S ribosomal protein S4 [Vibrio vulnificus YJ016] gi|320157577|ref|YP_004189956.1| 30S ribosomal protein S4p (S9e) [Vibrio vulnificus MO6-24/O] gi|31340392|sp|Q8DE62|RS4_VIBVU RecName: Full=30S ribosomal protein S4 gi|41017818|sp|Q7MPG5|RS4_VIBVY RecName: Full=30S ribosomal protein S4 gi|27360309|gb|AAO09246.1| ribosomal protein S4 [Vibrio vulnificus CMCP6] gi|37197322|dbj|BAC93162.1| ribosomal protein S4 [Vibrio vulnificus YJ016] gi|319932889|gb|ADV87753.1| SSU ribosomal protein S4p (S9e) [Vibrio vulnificus MO6-24/O] Length = 206 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ + EA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYAEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+KQ + A ++AE R+ P +I V+ M Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQTRIKAALEVAEQREKPTWIEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206 >gi|282880975|ref|ZP_06289666.1| ribosomal protein S4 [Prevotella timonensis CRIS 5C-B1] gi|281305198|gb|EFA97267.1| ribosomal protein S4 [Prevotella timonensis CRIS 5C-B1] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S +G L KQK K Sbjct: 1 MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGAMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LESRLD IV+R PT AARQ V+H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLESRLDNIVFRLGIAPTRAAARQMVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G+ VNI SY K G ++ V++K+K L + E+ +I + + F+ Sbjct: 119 IVVDGKVVNIPSYAVKPGQIVGVREKAKSLEVIEESLAGFNHSKYPWIEWDESSKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HQPERAD---IPENIKEQLIVELYSK 201 >gi|260779479|ref|ZP_05888369.1| SSU ribosomal protein S4p (S9e) [Vibrio coralliilyticus ATCC BAA-450] gi|260604288|gb|EEX30592.1| SSU ribosomal protein S4p (S9e) [Vibrio coralliilyticus ATCC BAA-450] Length = 206 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+KQ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDGGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206 >gi|127511116|ref|YP_001092313.1| 30S ribosomal protein S4 [Shewanella loihica PV-4] gi|152112260|sp|A3Q9A6|RS4_SHELP RecName: Full=30S ribosomal protein S4 gi|126636411|gb|ABO22054.1| SSU ribosomal protein S4P [Shewanella loihica PV-4] Length = 206 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLTRREGTDLFLKSGVRAIDSKCKLEAAPGQHGA-RKARLSEYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL++ LE+RLD +VYR F T ARQ V Sbjct: 60 KVRRTYGVL-EKQFRNYYKDAARLKGNTGENLLTLLETRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DVI V++KS++ A + A ++A +R+ P ++ V+ M Sbjct: 119 SHKSIMVNGRVVNIPSFKVSANDVISVREKSQKQARIKAALEVASQREKPTWVEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206 >gi|51891251|ref|YP_073942.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863] gi|81692253|sp|Q67T95|RS4B_SYMTH RecName: Full=30S ribosomal protein S4 B gi|51854940|dbj|BAD39098.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KHK+ RR+G L G K P R Y PG HG R K S +G QL KQK++ Sbjct: 1 MARYIGPKHKLCRRVGRPLCGSAKCPALKRPYRPGQHGPGRPQKLSEYGAQLLEKQKLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR F++A RSRG T L+ LE RLDT+VYR F T+ AARQ V H H Sbjct: 61 IYG-VMERQFRRYFEQAQRSRGVTGEVLLQLLEQRLDTVVYRLGFARTMAAARQLVGHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V +NGR V+I S + K GDV+ + QK++ LA V E+ L R VP Y+S++ M + Sbjct: 120 VTLNGRRVDIASCQVKPGDVVGLTQKARSLAVVRESLDL-RRPVPPYLSLDETTMTSRLQ 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + PV + +LVVE Y+R Sbjct: 179 RLPLREE---IPVDVDESLVVELYAR 201 >gi|264680561|ref|YP_003280471.1| ribosomal protein S4 [Comamonas testosteroni CNB-2] gi|299532875|ref|ZP_07046262.1| 30S ribosomal protein S4 [Comamonas testosteroni S44] gi|262211077|gb|ACY35175.1| ribosomal protein S4 [Comamonas testosteroni CNB-2] gi|298719099|gb|EFI60069.1| 30S ribosomal protein S4 [Comamonas testosteroni S44] Length = 207 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 131/214 (61%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +T+ PG HG+ + S +GLQLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSIADKAKFDTK---PGQHGRTSGQRTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ ADR RG+T NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAADRKRGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172 Q V+H+ + VNG+SVNI S+ KEGDV+ +++KSK+ A V+EA QL A+ P ++ V+ Sbjct: 117 QLVSHKAITVNGQSVNIPSFSVKEGDVVALREKSKKQARVVEALQLAAQVGFPAWVEVSA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D TF + P + + + +L+VE YSR Sbjct: 177 DKAEGTFKKSPDRDE---FAADINESLIVELYSR 207 >gi|218289979|ref|ZP_03494156.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1] gi|218239964|gb|EED07151.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1] Length = 208 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K V+ R Y PG HGQ RK Y G+QLR Sbjct: 1 MARYTGPVCRLCRREGIKLYLKGERCFSEKCAVDKRPYAPGQHGQGRKRTTEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++YYG + E +F ++EA R RG T L+ LESRLD +VYR F + ARQ Sbjct: 60 KQKARRYYGVL-ENQFERYYEEAARRRGVTGETLLQLLESRLDNVVYRLGFAASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+ VNGR V+I S+ KEGDV+ V++KS+ A + E ++L R +P ++ ++ + Sbjct: 119 LVRHGHIQVNGRRVDIPSFLVKEGDVVSVREKSRDNARLKELAELIPSRTIPAWLELDVE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N A +R P+ + +Q +VEFYSR Sbjct: 179 NWTAKVLRRPARDE---IDAPVQEQQIVEFYSR 208 >gi|83748174|ref|ZP_00945201.1| SSU ribosomal protein S4P [Ralstonia solanacearum UW551] gi|207744551|ref|YP_002260943.1| 30s ribosomal protein s4 [Ralstonia solanacearum IPO1609] gi|83725142|gb|EAP72293.1| SSU ribosomal protein S4P [Ralstonia solanacearum UW551] gi|206595957|emb|CAQ62884.1| 30s ribosomal protein s4 [Ralstonia solanacearum IPO1609] Length = 207 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 128/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKSGDVVAIREKSKKQVRIAESLSLAEQSGFPTWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF + P V + +L+VE YSR Sbjct: 177 KKMEGTFKQAPDR---VDIAGDINESLIVELYSR 207 >gi|167564391|ref|ZP_02357307.1| 30S ribosomal protein S4 [Burkholderia oklahomensis EO147] gi|167571538|ref|ZP_02364412.1| 30S ribosomal protein S4 [Burkholderia oklahomensis C6786] Length = 207 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + +NG N+ S + K GDVI +++K+K+ A ++EA LAE+ + +++V+ Sbjct: 117 QLVSHKAITLNGVVANVPSQQVKAGDVISIREKAKKQARIVEALSLAEQGGLASWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207 >gi|149376660|ref|ZP_01894419.1| ribosomal protein S4 [Marinobacter algicola DG893] gi|149359033|gb|EDM47498.1| ribosomal protein S4 [Marinobacter algicola DG893] Length = 206 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALDSKCNIETPPGMHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARIKGATGENLLQLLEGRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 +H+ +LVN + VNI SY+ + GDV+ V++K+K V A L+ P ++ V+ M Sbjct: 119 SHKAILVNDKLVNIPSYQVRPGDVVSVREKAKNQLRVKGALDLSSSRAPVSWVEVDASKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P + P + NL+VE YS+ Sbjct: 179 SGVYRSVPERTE---LPADINENLIVELYSK 206 >gi|94500968|ref|ZP_01307493.1| ribosomal protein S4 [Oceanobacter sp. RED65] gi|94426908|gb|EAT11891.1| ribosomal protein S4 [Oceanobacter sp. RED65] Length = 206 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG+HG R + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALDSKCKVETKPGVHGAGR-GRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FRS +KEA R +G T NL+ LE+RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRSYYKEAARVKGATGENLLKLLETRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY K GDV+ +++K+K+ + A +L A+R +I V+ M Sbjct: 119 SHKAIAVNGQTVNIPSYNIKAGDVVSIREKAKEQLRIKGALELAAQRGDIAWIDVDAKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + + L+VE YS+ Sbjct: 179 EGTFKAVPERSE---LSAEINEQLIVELYSK 206 >gi|222056680|ref|YP_002539042.1| ribosomal protein S4 [Geobacter sp. FRC-32] gi|254764590|sp|B9M6F3|RS4_GEOSF RecName: Full=30S ribosomal protein S4 gi|221565969|gb|ACM21941.1| ribosomal protein S4 [Geobacter sp. FRC-32] Length = 208 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + R+Y PG HGQ R K S +G+QLR Sbjct: 1 MARYTGPSCRLCRRENTELFLKGERCYTDKCAIKRRNYPPGQHGQGRS-KTSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR F+ ADR +G T NL+ LE RLD IVYR F + ARQ Sbjct: 60 KQKVRRIYG-ILENQFRGYFERADRLKGVTGENLLFLLERRLDNIVYRLGFASSRIEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NG+ V I S + K GD +E+++KS+++AS+ E+ + R +P+++ ++ Sbjct: 119 LVRHGHFTLNGKKVTIPSIQVKTGDTVELREKSRKVASINESLEAVVRRGIPQWLELDKG 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +D+ P +Q L+VE YS+ Sbjct: 179 AFKGSVKTLPVR-EDITMP--IQEQLIVELYSK 208 >gi|117918681|ref|YP_867873.1| 30S ribosomal protein S4 [Shewanella sp. ANA-3] gi|152112261|sp|A0KRP8|RS4_SHESA RecName: Full=30S ribosomal protein S4 gi|117611013|gb|ABK46467.1| SSU ribosomal protein S4P [Shewanella sp. ANA-3] Length = 206 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLESAPGQHGA-RKPRLSEYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ +++KS+ A + A + A+R+ P ++ V+ M Sbjct: 119 SHKSIMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + L+VE YS+ Sbjct: 179 EGAFKRIPERSD---LSAEINEQLIVELYSK 206 >gi|27468314|ref|NP_764951.1| 30S ribosomal protein S4 [Staphylococcus epidermidis ATCC 12228] gi|57867241|ref|YP_188856.1| 30S ribosomal protein S4 [Staphylococcus epidermidis RP62A] gi|251811109|ref|ZP_04825582.1| 30S ribosomal protein S4 [Staphylococcus epidermidis BCM-HMP0060] gi|282875859|ref|ZP_06284726.1| ribosomal protein S4 [Staphylococcus epidermidis SK135] gi|293366334|ref|ZP_06613014.1| 30S ribosomal protein S4 [Staphylococcus epidermidis M23864:W2(grey)] gi|38258357|sp|Q8CS54|RS4_STAES RecName: Full=30S ribosomal protein S4 gi|81674196|sp|Q5HNI5|RS4_STAEQ RecName: Full=30S ribosomal protein S4 gi|27315860|gb|AAO04995.1|AE016748_229 30S ribosomal protein S4 [Staphylococcus epidermidis ATCC 12228] gi|57637899|gb|AAW54687.1| ribosomal protein S4 [Staphylococcus epidermidis RP62A] gi|251805329|gb|EES57986.1| 30S ribosomal protein S4 [Staphylococcus epidermidis BCM-HMP0060] gi|281294884|gb|EFA87411.1| ribosomal protein S4 [Staphylococcus epidermidis SK135] gi|291319572|gb|EFE59938.1| 30S ribosomal protein S4 [Staphylococcus epidermidis M23864:W2(grey)] gi|329727885|gb|EGG64335.1| ribosomal protein S4 [Staphylococcus epidermidis VCU144] gi|329737374|gb|EGG73628.1| ribosomal protein S4 [Staphylococcus epidermidis VCU028] gi|329737515|gb|EGG73768.1| ribosomal protein S4 [Staphylococcus epidermidis VCU045] Length = 200 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + DN+ TFV Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLDIIKESVEI-NNFVPEYLDFDADNLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|152980403|ref|YP_001355076.1| 30S ribosomal protein S4 [Janthinobacterium sp. Marseille] gi|179308084|sp|A6T3H9|RS4_JANMA RecName: Full=30S ribosomal protein S4 gi|151280480|gb|ABR88890.1| small subunit ribosomal protein S4 [Janthinobacterium sp. Marseille] Length = 207 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +G QLR KQ Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG I E++FR F EADR +G+T L+ LE+RLD +VYR F T RQ V Sbjct: 61 KVKRMYG-ILERQFRRYFAEADRRKGNTGETLLKLLEARLDNVVYRMGFGSTRAEGRQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ VNG VNI SY+ K GDVI V++KSK+ ++EA LAE+ +P ++SV+ M Sbjct: 120 SHKAFTVNGIVVNIASYQVKPGDVIAVREKSKKQVRIVEALSLAEQSGMPSWVSVDAKKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ P + + +L+VE YSR Sbjct: 180 EGTYKAAPDRSE---IANDVNESLIVELYSR 207 >gi|49079326|gb|AAT49880.1| PA4239 [synthetic construct] Length = 207 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HGQ R+ + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQ-RRGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++EA R +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQEASRRKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ K GDV+ V++KSK + +A +L +R E++ V+ D Sbjct: 119 SHKAITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALELCGQRGRVEWVEVDLDKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P+ + NL+VE YS+ Sbjct: 179 AGTFKSAPARSD---LSADINENLIVELYSK 206 >gi|229524553|ref|ZP_04413958.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae bv. albensis VL426] gi|229338134|gb|EEO03151.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae bv. albensis VL426] Length = 206 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S+ DV+ V++K+K+ + + A ++AE R+ P +I V+ + M Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPPWIEVDVNTM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206 >gi|261854973|ref|YP_003262256.1| ribosomal protein S4 [Halothiobacillus neapolitanus c2] gi|261835442|gb|ACX95209.1| ribosomal protein S4 [Halothiobacillus neapolitanus c2] Length = 207 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + + PG HG RK K S +G+QLR KQ Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGVRSHEDKCHHDRAPGQHGAARKQKVSEYGVQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F + FK+A + +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 61 KLRRIYGVL-ERQFANYFKKAAQLKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +HR + VNG VNI SY+ DV+ V++ S++ + ++ ++ A+R +ISV+ M Sbjct: 120 SHRAITVNGEVVNIASYQVAANDVVAVRESSRKQQRIKDSLEIAAQRPDVSWISVDAAKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F PS + P + +LVVE YS+ Sbjct: 180 EGVFKSAPSRDE---LPAEINESLVVELYSK 207 >gi|319764615|ref|YP_004128552.1| ribosomal protein s4 [Alicycliphilus denitrificans BC] gi|330826872|ref|YP_004390175.1| 30S ribosomal protein S4 [Alicycliphilus denitrificans K601] gi|317119176|gb|ADV01665.1| ribosomal protein S4 [Alicycliphilus denitrificans BC] gi|329312244|gb|AEB86659.1| ribosomal protein S4 [Alicycliphilus denitrificans K601] Length = 224 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 15/213 (7%) Query: 2 SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 ++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S +GLQLR Sbjct: 19 ARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLRE 75 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR F+ A+R +G+T NL++ LESRLD +VYR F T ARQ Sbjct: 76 KQKVKRMYGVL-EKQFRRYFEAAERRKGNTGANLLALLESRLDNVVYRMGFGSTRAEARQ 134 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V+H+ + VNG+SVNI SY K GDV+ V++KSK+ A ++EA QLA++ +P ++ VN D Sbjct: 135 LVSHKAITVNGQSVNIASYLVKTGDVVAVREKSKKQARIVEALQLAQQVGMPAWVEVNAD 194 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF ++P + + + +L+VE YSR Sbjct: 195 KVEGTFKQVPDRDQ---FGADINESLIVELYSR 224 >gi|28897055|ref|NP_796660.1| 30S ribosomal protein S4 [Vibrio parahaemolyticus RIMD 2210633] gi|153840228|ref|ZP_01992895.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ3810] gi|156973074|ref|YP_001443981.1| 30S ribosomal protein S4 [Vibrio harveyi ATCC BAA-1116] gi|260877973|ref|ZP_05890328.1| ribosomal protein S4 [Vibrio parahaemolyticus AN-5034] gi|260895673|ref|ZP_05904169.1| ribosomal protein S4 [Vibrio parahaemolyticus Peru-466] gi|260903551|ref|ZP_05911946.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ4037] gi|262392492|ref|YP_003284346.1| 30S ribosomal protein S4p [Vibrio sp. Ex25] gi|269964713|ref|ZP_06178951.1| 30S ribosomal protein S4 [Vibrio alginolyticus 40B] gi|31340377|sp|Q87SZ1|RS4_VIBPA RecName: Full=30S ribosomal protein S4 gi|171769916|sp|A7N0H7|RS4_VIBHB RecName: Full=30S ribosomal protein S4 gi|28805263|dbj|BAC58544.1| ribosomal protein S4 [Vibrio parahaemolyticus RIMD 2210633] gi|149746105|gb|EDM57235.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ3810] gi|156524668|gb|ABU69754.1| hypothetical protein VIBHAR_00753 [Vibrio harveyi ATCC BAA-1116] gi|262336086|gb|ACY49881.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. Ex25] gi|269830612|gb|EEZ84833.1| 30S ribosomal protein S4 [Vibrio alginolyticus 40B] gi|308089501|gb|EFO39196.1| ribosomal protein S4 [Vibrio parahaemolyticus Peru-466] gi|308090096|gb|EFO39791.1| ribosomal protein S4 [Vibrio parahaemolyticus AN-5034] gi|308109051|gb|EFO46591.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ4037] gi|328471858|gb|EGF42735.1| 30S ribosomal protein S4 [Vibrio parahaemolyticus 10329] Length = 206 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+KQ A + A ++AE R+ P +I V+ M Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVAEQREKPTWIEVDGGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206 >gi|326334520|ref|ZP_08200731.1| 30S ribosomal protein S4 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693289|gb|EGD35217.1| 30S ribosomal protein S4 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 201 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 125/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS ++Y PG HG R+++K S + +QL+ KQK K Sbjct: 1 MARYIGPKSKIARKFGEAIFGEDKS-FAKKNYPPGQHGINRKRAKRSEYAIQLQEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++F++++++A RS+G T L+ E+RLD +VYR P+ AARQ V+HR Sbjct: 60 YTYG-ILERQFQNMYEKARRSKGVTGEVLLQLCEARLDNVVYRMGIAPSRRAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GD++ V+ KS+ L + A + V E+I+ N + M TF Sbjct: 119 HITVNGEVVNIPSYSLKAGDIVGVRHKSQSLTVIENALA-SNSSVYEWITWNPEKMEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + P ++ L+VE YS+ Sbjct: 178 VALPQR---IQIPENIKEQLIVELYSK 201 >gi|228941836|ref|ZP_04104383.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228960923|ref|ZP_04122556.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228974761|ref|ZP_04135327.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981356|ref|ZP_04141656.1| 30S ribosomal protein S4 [Bacillus thuringiensis Bt407] gi|229048362|ref|ZP_04193930.1| 30S ribosomal protein S4 [Bacillus cereus AH676] gi|229087217|ref|ZP_04219364.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-44] gi|229112121|ref|ZP_04241664.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-15] gi|229147216|ref|ZP_04275574.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST24] gi|228636326|gb|EEK92798.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST24] gi|228671444|gb|EEL26745.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-15] gi|228696098|gb|EEL48936.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-44] gi|228723087|gb|EEL74464.1| 30S ribosomal protein S4 [Bacillus cereus AH676] gi|228778556|gb|EEM26823.1| 30S ribosomal protein S4 [Bacillus thuringiensis Bt407] gi|228785164|gb|EEM33177.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228798819|gb|EEM45799.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228818048|gb|EEM64126.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942441|gb|AEA18337.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar chinensis CT-43] Length = 200 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200 >gi|255067434|ref|ZP_05319289.1| ribosomal protein S4 [Neisseria sicca ATCC 29256] gi|261364879|ref|ZP_05977762.1| ribosomal protein S4 [Neisseria mucosa ATCC 25996] gi|255048229|gb|EET43693.1| ribosomal protein S4 [Neisseria sicca ATCC 29256] gi|288566927|gb|EFC88487.1| ribosomal protein S4 [Neisseria mucosa ATCC 25996] Length = 206 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKLDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P ++SV+ D + Sbjct: 119 SHKAITVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206 >gi|289579115|ref|YP_003477742.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9] gi|297545302|ref|YP_003677604.1| ribosomal protein S4 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528828|gb|ADD03180.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9] gi|296843077|gb|ADH61593.1| ribosomal protein S4 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 206 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + K PV R Y PG HGQ RK SY G+QLR Sbjct: 1 MGRYLGPSCRLCRREGMKLYLKGDKCYTDKCPVVRRGYAPGQHGQERKKLTSY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+YYG + E++F +++A+R +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKLKRYYG-LLERQFERFYEKAERMKGITGENLLQLLERRLDNVVYRLGFAVSRRQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V+H H+ VNG+ V+I S+ K GDVI V++KS+ + + + A R+VP+++ +N D Sbjct: 119 LVSHGHIEVNGKKVDIPSFLVKPGDVISVREKSRSMELIKNNLEAA-RNVPDWLELNKDA 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + + P +Q +L+VE YS+ Sbjct: 178 FEGRVVSLP-RREHIDLP--IQEHLIVELYSK 206 >gi|224023644|ref|ZP_03642010.1| hypothetical protein BACCOPRO_00351 [Bacteroides coprophilus DSM 18228] gi|224016866|gb|EEF74878.1| hypothetical protein BACCOPRO_00351 [Bacteroides coprophilus DSM 18228] Length = 201 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNNRRKKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A + G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNLFEKAASANGITGEILLQSLECRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G ++ V+++SK L + A ++ + ++ + Sbjct: 119 ITVDGKVVNIPSYSVKPGQLVGVRERSKSLEVIGSALAGFNHSKYPWLEWDENSKTGKML 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|21230387|ref|NP_636304.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21241760|ref|NP_641342.1| 30S ribosomal protein S4 [Xanthomonas axonopodis pv. citri str. 306] gi|66769619|ref|YP_244381.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris str. 8004] gi|78046578|ref|YP_362753.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|188992831|ref|YP_001904841.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris str. B100] gi|294627861|ref|ZP_06706440.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664166|ref|ZP_06729552.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325916510|ref|ZP_08178779.1| SSU ribosomal protein S4P [Xanthomonas vesicatoria ATCC 35937] gi|325921504|ref|ZP_08183359.1| SSU ribosomal protein S4P [Xanthomonas gardneri ATCC 19865] gi|325925364|ref|ZP_08186766.1| SSU ribosomal protein S4P [Xanthomonas perforans 91-118] gi|59800213|sp|P0A0X9|RS4_XANCP RecName: Full=30S ribosomal protein S4 gi|59800214|sp|P0A0Y0|RS4_XANAC RecName: Full=30S ribosomal protein S4 gi|81304426|sp|Q4URG2|RS4_XANC8 RecName: Full=30S ribosomal protein S4 gi|90101736|sp|Q3BWW0|RS4_XANC5 RecName: Full=30S ribosomal protein S4 gi|226695102|sp|B0RU59|RS4_XANCB RecName: Full=30S ribosomal protein S4 gi|4098576|gb|AAD00324.1| ribosomal protein S4 [Xanthomonas campestris pv. campestris] gi|21107132|gb|AAM35878.1| 30S ribosomal protein S4 [Xanthomonas axonopodis pv. citri str. 306] gi|21111944|gb|AAM40228.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574951|gb|AAY50361.1| 30S ribosomal protein s4 [Xanthomonas campestris pv. campestris str. 8004] gi|78035008|emb|CAJ22653.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|167734591|emb|CAP52801.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris] gi|292597775|gb|EFF41933.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606069|gb|EFF49334.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325537299|gb|EGD09026.1| SSU ribosomal protein S4P [Xanthomonas vesicatoria ATCC 35937] gi|325544242|gb|EGD15623.1| SSU ribosomal protein S4P [Xanthomonas perforans 91-118] gi|325548051|gb|EGD19050.1| SSU ribosomal protein S4P [Xanthomonas gardneri ATCC 19865] Length = 208 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + + PG HG RK K S + QLR Sbjct: 1 MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGAARKGKLSDYATQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K+A +G+T NL+ LE+RLD + YR F T AAR Sbjct: 58 EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVCYRMGFAVTRPAAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171 Q V+HR VLVNG+SVN+ SY+ K GD I + +K+++ V EA +AE+ P ++ V+ Sbjct: 117 QLVSHRGVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEALTVAEQHDMTPSWVEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P P + L+VE YS+ Sbjct: 177 SKKFSGVFKAVPDRAD---LPSDINEALIVELYSK 208 >gi|295694865|ref|YP_003588103.1| ribosomal protein S4 [Bacillus tusciae DSM 2912] gi|295410467|gb|ADG04959.1| ribosomal protein S4 [Bacillus tusciae DSM 2912] Length = 208 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K ++ R Y PG HGQ R+ + Y G+QLR Sbjct: 1 MARYTGPVCRLCRREGVKLYLKGERCYSDKCAIDRRGYAPGQHGQGRRKQSEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR ++EA+R G T L+ LE RLD +VYR + + ARQ Sbjct: 60 KQKARRTYGVL-EKQFRHYYEEANRQHGVTGEVLLQLLERRLDNVVYRLGYAASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNGR V+I SY+ KEGDV+ V++KS + + E + A+ R VP ++ + Sbjct: 119 LVRHGHFTVNGRRVDIPSYQLKEGDVVAVREKSLESPRLKELVETADSRTVPAWLDRDSA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +RIP+ + +Q ++VE YSR Sbjct: 179 TASGKVLRIPTRDE---IDTPVQEQMIVELYSR 208 >gi|262370554|ref|ZP_06063879.1| ribosomal protein S4 [Acinetobacter johnsonii SH046] gi|262314354|gb|EEY95396.1| ribosomal protein S4 [Acinetobacter johnsonii SH046] Length = 208 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HG R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKAAKAPGQHGGARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P ++ ++H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAVELAAQRGIPSWMEIDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208 >gi|157960037|ref|YP_001500071.1| 30S ribosomal protein S4 [Shewanella pealeana ATCC 700345] gi|167626016|ref|YP_001676310.1| 30S ribosomal protein S4 [Shewanella halifaxensis HAW-EB4] gi|212634853|ref|YP_002311378.1| 30S ribosomal protein S4 [Shewanella piezotolerans WP3] gi|189045398|sp|B0TLY9|RS4_SHEHH RecName: Full=30S ribosomal protein S4 gi|189045399|sp|A8GYZ9|RS4_SHEPA RecName: Full=30S ribosomal protein S4 gi|226695075|sp|B8CNF7|RS4_SHEPW RecName: Full=30S ribosomal protein S4 gi|157845037|gb|ABV85536.1| ribosomal protein S4 [Shewanella pealeana ATCC 700345] gi|167356038|gb|ABZ78651.1| ribosomal protein S4 [Shewanella halifaxensis HAW-EB4] gi|212556337|gb|ACJ28791.1| Ribosomal protein S4 [Shewanella piezotolerans WP3] Length = 206 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R++G+T NL++ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARTKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ ++VNG VNI S++ DV+ V++KS+ A + A + A+R+ P ++ V++ M Sbjct: 119 SHKSIMVNGSVVNIPSFKVSANDVVSVREKSRTQARIKAALEVSAQREKPTWVEVDNTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + L+VE YS+ Sbjct: 179 EGAFKRIPERSD---LSAEINEQLIVELYSK 206 >gi|288925689|ref|ZP_06419621.1| ribosomal protein S4 [Prevotella buccae D17] gi|315606478|ref|ZP_07881493.1| 30S ribosomal protein S4 [Prevotella buccae ATCC 33574] gi|288337627|gb|EFC75981.1| ribosomal protein S4 [Prevotella buccae D17] gi|315251884|gb|EFU31858.1| 30S ribosomal protein S4 [Prevotella buccae ATCC 33574] Length = 201 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MAKYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKVSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F +A ++ G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFDKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G+ V+I SY K G V+ V++K+K L + A ++ + + F+ Sbjct: 119 IVVDGKVVSIPSYSVKAGQVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDQNTKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|319639573|ref|ZP_07994320.1| 30S ribosomal protein S4 [Neisseria mucosa C102] gi|317399144|gb|EFV79818.1| 30S ribosomal protein S4 [Neisseria mucosa C102] Length = 206 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKMDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P ++SV+ D + Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LSGDINEQLVVEFYSK 206 >gi|330997339|ref|ZP_08321190.1| ribosomal protein S4 [Paraprevotella xylaniphila YIT 11841] gi|329570713|gb|EGG52429.1| ribosomal protein S4 [Paraprevotella xylaniphila YIT 11841] Length = 201 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYTGPKSRIARRFGEAIFGPDK-VLSKRNFPPGQHGNNRRKKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A R+ G T L+ LE RLD +VYR PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNMFEKAARTSGITGEILLQNLECRLDNVVYRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SY K G +I V++KSK L + A +I + + + Sbjct: 119 IIVDGEVVNIPSYAVKPGQIIGVREKSKSLEVIANALAGFNHSKYPWIEWDENTKSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|90416840|ref|ZP_01224769.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2207] gi|90331187|gb|EAS46431.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2207] Length = 206 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + P+ ++ PG HGQ R+ + S +G+QLR KQ Sbjct: 1 MARYLGPTCKLSRREGTDLFLKSGVRPLESKCRADSAPGQHGQ-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +++A R +G+T NL++ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLTLLERRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 H ++VNG+ VNI S++ +EGDV+ +++KSK+ V A QL A+R E+++V+ M Sbjct: 119 AHNSIVVNGQKVNIPSFKVQEGDVVGLREKSKKQLRVQTALQLAAQRGEVEWMNVDSSKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P P + NL+VE YS+ Sbjct: 179 EGTFTRNPDRSD---LPAEINENLIVELYSK 206 >gi|228910481|ref|ZP_04074296.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 200] gi|228849247|gb|EEM94086.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 200] Length = 200 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVIVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERSE---LPAEINEALIVEFYSR 200 >gi|317129954|ref|YP_004096236.1| ribosomal protein S4 [Bacillus cellulosilyticus DSM 2522] gi|315474902|gb|ADU31505.1| ribosomal protein S4 [Bacillus cellulosilyticus DSM 2522] Length = 200 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R YGPG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LQKRPYGPGEHGPNQRKKMSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR +F +A + +G N + LESRLD +VYR T ARQ VNH H Sbjct: 60 MYG-MNERQFRKLFDQAGKIQGIHGENFMILLESRLDNLVYRLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V V+G V+I SYR K G VI +++KS+ L +V A ++ + VP Y+ N D + TF Sbjct: 119 VTVDGGRVDIASYRVKPGQVIGLREKSRNLDAVKNAVEVNDF-VPAYLDFNADALEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSE---LPAEITEQLIVEFYSR 200 >gi|121997625|ref|YP_001002412.1| ribosomal protein S4 [Halorhodospira halophila SL1] gi|152060952|sp|A1WV98|RS4_HALHL RecName: Full=30S ribosomal protein S4 gi|121589030|gb|ABM61610.1| SSU ribosomal protein S4P [Halorhodospira halophila SL1] Length = 207 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR +L+ + ++T+ PG HGQRR + S +GLQLR KQ Sbjct: 1 MAKYIGPKCKLARREKTDLFLKSGVRSIDTKCKLEQPPGQHGQRRGGRMSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ +KEA R + T L+ LESRLD + YR F T ARQ V Sbjct: 61 KVRRMYG-IMERQFRNYYKEAARRKAATGTALLQLLESRLDNVCYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175 NHR VLVNGR VNI SY+ + GD + VK+K+K + A +LA+++ ++ V+ M Sbjct: 120 NHRGVLVNGRVVNIPSYQVQPGDTVSVKEKAKSQLRIQAALELAQQNGWASWVDVDATKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F + P + +L+VE YS+ Sbjct: 180 EGVFKQAPDRAD---LSQEINESLIVELYSK 207 >gi|261250393|ref|ZP_05942968.1| SSU ribosomal protein S4p (S9e) [Vibrio orientalis CIP 102891] gi|260938962|gb|EEX94949.1| SSU ribosomal protein S4p (S9e) [Vibrio orientalis CIP 102891] Length = 206 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VNI S++ DV+ +++K+KQ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKAILVNGKVVNIPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ATF R+P + L+VE YS+ Sbjct: 179 EATFKRMPERSD---LSADINEQLIVELYSK 206 >gi|7440168|pir||JE0399 ribosomal protein S4 - Thermus aquaticus (strain HB8) Length = 209 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + PK + R Y PG HGQ+R +PS + ++LR Sbjct: 1 MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG ISE++FR++F+EA + +G T + LESRLD +VYR F + ARQ Sbjct: 61 KQKLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+ VNGR V++ SYR + GD I V +KS+ L + + + + R V ++S+ + Sbjct: 120 LVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLEVE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F+R+P +D+ PV LV+EFYSR Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVIEFYSR 209 >gi|319952171|ref|YP_004163438.1| ssu ribosomal protein s4p [Cellulophaga algicola DSM 14237] gi|319420831|gb|ADV47940.1| SSU ribosomal protein S4P [Cellulophaga algicola DSM 14237] Length = 201 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R++ PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYIGPKTKIARKFGEAIFGDDKS-FEKRNFPPGQHGNARRRGKKSEYAVQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR+IF A R G T L+ E RLD +V+R + ARQ V+HR Sbjct: 60 YTYG-ILEKQFRNIFASAKRKEGVTGEILLQLCECRLDNVVFRMGVSNSRSGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK ++++ +A + V E+++ N + M TF Sbjct: 119 HITVNGELVNIPSYSLKSGDVVGVREKSKSISTIQDALA-SNSSVYEWMTWNTEKMEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P L+ P ++ L+VE YS+ Sbjct: 178 VAVPERLQ---IPENIKEQLIVELYSK 201 >gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 [Neisseria flavescens SK114] gi|241320027|gb|EER56408.1| ribosomal protein S4 [Neisseria flavescens SK114] Length = 206 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKMDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P ++SV+ D + Sbjct: 119 SHKAIIVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LSGDINEQLVVEFYSK 206 >gi|189219451|ref|YP_001940092.1| Ribosomal protein S4 [Methylacidiphilum infernorum V4] gi|189186309|gb|ACD83494.1| Ribosomal protein S4 [Methylacidiphilum infernorum V4] Length = 228 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K K KI RR L+G P + + Y PG+HGQR K S + + L KQK++ Sbjct: 27 MAKYIGPKTKISRRFNVALFG-PNKALERKPYPPGIHGQRAGKKKSDYAIALGEKQKLRF 85 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E++F F A + +G T L+ LE RLD +VYR F + ARQ VNH H Sbjct: 86 MYG-ITERQFSRYFNIAHKKKGVTGEVLLQILEERLDNVVYRLCFATSRMEARQLVNHGH 144 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VNG+ VNI SYR K GDVIEV K + L + + +P+++++ DN+ Sbjct: 145 IYVNGKKVNIPSYRTKPGDVIEVCPKPQSRKLALRNLEAMKGVKIPDWLALEPDNLKGVV 204 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ + P + LVVEFYS+ Sbjct: 205 KRVPTRDEIQPI---VNEQLVVEFYSK 228 >gi|30022730|ref|NP_834361.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 14579] gi|206969984|ref|ZP_03230938.1| 30S ribosomal protein S4 [Bacillus cereus AH1134] gi|218235372|ref|YP_002369450.1| 30S ribosomal protein S4 [Bacillus cereus B4264] gi|228923404|ref|ZP_04086692.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954925|ref|ZP_04116943.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072158|ref|ZP_04205367.1| 30S ribosomal protein S4 [Bacillus cereus F65185] gi|229081908|ref|ZP_04214400.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-2] gi|229129939|ref|ZP_04258905.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-Cer4] gi|229152850|ref|ZP_04281033.1| 30S ribosomal protein S4 [Bacillus cereus m1550] gi|229180974|ref|ZP_04308309.1| 30S ribosomal protein S4 [Bacillus cereus 172560W] gi|229192859|ref|ZP_04319817.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 10876] gi|296505124|ref|YP_003666824.1| 30S ribosomal protein S4 [Bacillus thuringiensis BMB171] gi|38372409|sp|Q817A4|RS4_BACCR RecName: Full=30S ribosomal protein S4 gi|226697802|sp|B7H711|RS4_BACC4 RecName: Full=30S ribosomal protein S4 gi|29898289|gb|AAP11562.1| SSU ribosomal protein S4P [Bacillus cereus ATCC 14579] gi|206735672|gb|EDZ52840.1| 30S ribosomal protein S4 [Bacillus cereus AH1134] gi|218163329|gb|ACK63321.1| ribosomal protein S4 [Bacillus cereus B4264] gi|228590698|gb|EEK48559.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 10876] gi|228602531|gb|EEK60017.1| 30S ribosomal protein S4 [Bacillus cereus 172560W] gi|228630670|gb|EEK87316.1| 30S ribosomal protein S4 [Bacillus cereus m1550] gi|228653630|gb|EEL09502.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-Cer4] gi|228701496|gb|EEL53990.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-2] gi|228711092|gb|EEL63058.1| 30S ribosomal protein S4 [Bacillus cereus F65185] gi|228804746|gb|EEM51347.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836358|gb|EEM81711.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326176|gb|ADH09104.1| 30S ribosomal protein S4 [Bacillus thuringiensis BMB171] Length = 200 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERSE---LPAEINEALIVEFYSR 200 >gi|70726207|ref|YP_253121.1| 30S ribosomal protein S4 [Staphylococcus haemolyticus JCSC1435] gi|82581621|sp|Q4L760|RS4_STAHJ RecName: Full=30S ribosomal protein S4 gi|68446931|dbj|BAE04515.1| 30S ribosomal protein S4 [Staphylococcus haemolyticus JCSC1435] Length = 200 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ V H H Sbjct: 60 LYG-MTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVGHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V V+GR V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + D++ TFV Sbjct: 119 VEVDGRRVDIPSYSLKPGQVITVREKSQNLDIIKESVEI-NNFVPEYLDFDADSLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|312884679|ref|ZP_07744380.1| 30S ribosomal protein S4 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367592|gb|EFP95143.1| 30S ribosomal protein S4 [Vibrio caribbenthicus ATCC BAA-2122] Length = 206 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+F + +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFHNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+KQ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDGSKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ATF R+P + L+VE YS+ Sbjct: 179 EATFKRLPERSD---LSADINEQLIVELYSK 206 >gi|15642567|ref|NP_232200.1| 30S ribosomal protein S4 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147675276|ref|YP_001218066.1| 30S ribosomal protein S4 [Vibrio cholerae O395] gi|153820465|ref|ZP_01973132.1| ribosomal protein S4 [Vibrio cholerae NCTC 8457] gi|227082689|ref|YP_002811240.1| ribosomal protein S4 [Vibrio cholerae M66-2] gi|229507376|ref|ZP_04396881.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae BX 330286] gi|229509700|ref|ZP_04399181.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae B33] gi|229513495|ref|ZP_04402959.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TMA 21] gi|229516825|ref|ZP_04406271.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae RC9] gi|229521638|ref|ZP_04411056.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TM 11079-80] gi|229527498|ref|ZP_04416890.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae 12129(1)] gi|229606882|ref|YP_002877530.1| 30S ribosomal protein S4 [Vibrio cholerae MJ-1236] gi|254292241|ref|ZP_04963004.1| ribosomal protein S4 [Vibrio cholerae AM-19226] gi|254851112|ref|ZP_05240462.1| ribosomal protein S4 [Vibrio cholerae MO10] gi|255744459|ref|ZP_05418411.1| SSU ribosomal protein S4p (S9e) [Vibrio cholera CIRS 101] gi|297581414|ref|ZP_06943337.1| ribosomal protein S4 [Vibrio cholerae RC385] gi|26399513|sp|Q9KP07|RS4_VIBCH RecName: Full=30S ribosomal protein S4 gi|172047566|sp|A5F573|RS4_VIBC3 RecName: Full=30S ribosomal protein S4 gi|254764621|sp|C3LRN4|RS4_VIBCM RecName: Full=30S ribosomal protein S4 gi|9657158|gb|AAF95713.1| ribosomal protein S4 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126508992|gb|EAZ71586.1| ribosomal protein S4 [Vibrio cholerae NCTC 8457] gi|146317159|gb|ABQ21698.1| ribosomal protein S4 [Vibrio cholerae O395] gi|150421843|gb|EDN13827.1| ribosomal protein S4 [Vibrio cholerae AM-19226] gi|227010577|gb|ACP06789.1| ribosomal protein S4 [Vibrio cholerae M66-2] gi|227014461|gb|ACP10671.1| ribosomal protein S4 [Vibrio cholerae O395] gi|229335130|gb|EEO00615.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae 12129(1)] gi|229341232|gb|EEO06236.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TM 11079-80] gi|229345888|gb|EEO10860.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae RC9] gi|229349372|gb|EEO14328.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TMA 21] gi|229353174|gb|EEO18113.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae B33] gi|229354881|gb|EEO19802.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae BX 330286] gi|229369537|gb|ACQ59960.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae MJ-1236] gi|254846817|gb|EET25231.1| ribosomal protein S4 [Vibrio cholerae MO10] gi|255737984|gb|EET93377.1| SSU ribosomal protein S4p (S9e) [Vibrio cholera CIRS 101] gi|297534252|gb|EFH73090.1| ribosomal protein S4 [Vibrio cholerae RC385] gi|327485054|gb|AEA79461.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae LMA3894-4] Length = 206 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S+ DV+ V++K+K+ + + A ++AE R+ P +I V+ + M Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPTWIEVDVNTM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206 >gi|15924709|ref|NP_372243.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu50] gi|15927296|ref|NP_374829.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus N315] gi|21283391|ref|NP_646479.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MW2] gi|49486544|ref|YP_043765.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MSSA476] gi|57652018|ref|YP_186603.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus COL] gi|82751307|ref|YP_417048.1| 30S ribosomal protein S4 [Staphylococcus aureus RF122] gi|87159914|ref|YP_494360.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195529|ref|YP_500334.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268198|ref|YP_001247141.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus JH9] gi|150394266|ref|YP_001316941.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus JH1] gi|151221825|ref|YP_001332647.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980036|ref|YP_001442295.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu3] gi|161509934|ref|YP_001575593.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315106|ref|ZP_04838319.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732369|ref|ZP_04866534.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255006504|ref|ZP_05145105.2| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794103|ref|ZP_05643082.1| 30S ribosomal protein S4 [Staphylococcus aureus A9781] gi|258415807|ref|ZP_05682078.1| 30S ribosomal protein S4 [Staphylococcus aureus A9763] gi|258424134|ref|ZP_05687016.1| SSU ribosomal protein S4 [Staphylococcus aureus A9635] gi|258438286|ref|ZP_05689570.1| ribosomal protein S4 [Staphylococcus aureus A9299] gi|258443744|ref|ZP_05692083.1| ribosomal protein S4 [Staphylococcus aureus A8115] gi|258445955|ref|ZP_05694131.1| 30S ribosomal protein S4 [Staphylococcus aureus A6300] gi|258448365|ref|ZP_05696482.1| ribosomal protein S4 [Staphylococcus aureus A6224] gi|258450886|ref|ZP_05698939.1| 30S ribosomal protein S4 [Staphylococcus aureus A5948] gi|258454155|ref|ZP_05702126.1| SSU ribosomal protein S4P [Staphylococcus aureus A5937] gi|262049033|ref|ZP_06021911.1| 30S ribosomal protein S4 [Staphylococcus aureus D30] gi|262051784|ref|ZP_06024001.1| 30S ribosomal protein S4 [Staphylococcus aureus 930918-3] gi|269203358|ref|YP_003282627.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ED98] gi|282893214|ref|ZP_06301448.1| 30S ribosomal protein S4 [Staphylococcus aureus A8117] gi|282916980|ref|ZP_06324738.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus D139] gi|282924410|ref|ZP_06332083.1| 30S ribosomal protein S4 [Staphylococcus aureus A9765] gi|282927849|ref|ZP_06335460.1| 30S ribosomal protein S4 [Staphylococcus aureus A10102] gi|283770798|ref|ZP_06343690.1| small subunit ribosomal protein S4 [Staphylococcus aureus subsp. aureus H19] gi|284024766|ref|ZP_06379164.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 132] gi|294849881|ref|ZP_06790620.1| 30S ribosomal protein S4 [Staphylococcus aureus A9754] gi|295406030|ref|ZP_06815838.1| 30S ribosomal protein S4 [Staphylococcus aureus A8819] gi|296276442|ref|ZP_06858949.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MR1] gi|297207568|ref|ZP_06924003.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245044|ref|ZP_06928921.1| 30S ribosomal protein S4 [Staphylococcus aureus A8796] gi|300911649|ref|ZP_07129093.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus TCH70] gi|304380688|ref|ZP_07363359.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039510|sp|P66563|RS4_STAAN RecName: Full=30S ribosomal protein S4 gi|54039511|sp|P66564|RS4_STAAW RecName: Full=30S ribosomal protein S4 gi|54041963|sp|P66562|RS4_STAAM RecName: Full=30S ribosomal protein S4 gi|56749380|sp|Q6G8K8|RS4_STAAS RecName: Full=30S ribosomal protein S4 gi|62287184|sp|Q5HF54|RS4_STAAC RecName: Full=30S ribosomal protein S4 gi|90101727|sp|Q2YTH0|RS4_STAAB RecName: Full=30S ribosomal protein S4 gi|122539301|sp|Q2FXK6|RS4_STAA8 RecName: Full=30S ribosomal protein S4 gi|123485448|sp|Q2FG18|RS4_STAA3 RecName: Full=30S ribosomal protein S4 gi|171769945|sp|A7X3F0|RS4_STAA1 RecName: Full=30S ribosomal protein S4 gi|172048947|sp|A6QHQ3|RS4_STAAE RecName: Full=30S ribosomal protein S4 gi|189045401|sp|A6U2I6|RS4_STAA2 RecName: Full=30S ribosomal protein S4 gi|189045402|sp|A5ITP2|RS4_STAA9 RecName: Full=30S ribosomal protein S4 gi|189045403|sp|A8Z2N6|RS4_STAAT RecName: Full=30S ribosomal protein S4 gi|13701514|dbj|BAB42808.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus N315] gi|14247491|dbj|BAB57881.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu50] gi|21204831|dbj|BAB95527.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MW2] gi|49244987|emb|CAG43448.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MSSA476] gi|57286204|gb|AAW38298.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus COL] gi|82656838|emb|CAI81267.1| 30S ribosomal protein S4 [Staphylococcus aureus RF122] gi|87125888|gb|ABD20402.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203087|gb|ABD30897.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741267|gb|ABQ49565.1| SSU ribosomal protein S4P [Staphylococcus aureus subsp. aureus JH9] gi|149946718|gb|ABR52654.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus JH1] gi|150374625|dbj|BAF67885.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722171|dbj|BAF78588.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu3] gi|160368743|gb|ABX29714.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723891|gb|EES92620.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257788075|gb|EEV26415.1| 30S ribosomal protein S4 [Staphylococcus aureus A9781] gi|257839400|gb|EEV63873.1| 30S ribosomal protein S4 [Staphylococcus aureus A9763] gi|257845755|gb|EEV69787.1| SSU ribosomal protein S4 [Staphylococcus aureus A9635] gi|257848330|gb|EEV72321.1| ribosomal protein S4 [Staphylococcus aureus A9299] gi|257851150|gb|EEV75093.1| ribosomal protein S4 [Staphylococcus aureus A8115] gi|257855197|gb|EEV78136.1| 30S ribosomal protein S4 [Staphylococcus aureus A6300] gi|257858333|gb|EEV81218.1| ribosomal protein S4 [Staphylococcus aureus A6224] gi|257861422|gb|EEV84230.1| 30S ribosomal protein S4 [Staphylococcus aureus A5948] gi|257863607|gb|EEV86364.1| SSU ribosomal protein S4P [Staphylococcus aureus A5937] gi|259160278|gb|EEW45305.1| 30S ribosomal protein S4 [Staphylococcus aureus 930918-3] gi|259162850|gb|EEW47414.1| 30S ribosomal protein S4 [Staphylococcus aureus D30] gi|262075648|gb|ACY11621.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ED98] gi|269941198|emb|CBI49586.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus TW20] gi|282319467|gb|EFB49819.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus D139] gi|282590359|gb|EFB95438.1| 30S ribosomal protein S4 [Staphylococcus aureus A10102] gi|282592911|gb|EFB97914.1| 30S ribosomal protein S4 [Staphylococcus aureus A9765] gi|282764532|gb|EFC04658.1| 30S ribosomal protein S4 [Staphylococcus aureus A8117] gi|283460945|gb|EFC08035.1| small subunit ribosomal protein S4 [Staphylococcus aureus subsp. aureus H19] gi|283470985|emb|CAQ50196.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus ST398] gi|285817402|gb|ADC37889.1| 30S ribosomal protein S4 [Staphylococcus aureus 04-02981] gi|294823220|gb|EFG39650.1| 30S ribosomal protein S4 [Staphylococcus aureus A9754] gi|294969027|gb|EFG45048.1| 30S ribosomal protein S4 [Staphylococcus aureus A8819] gi|296887585|gb|EFH26483.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178124|gb|EFH37372.1| 30S ribosomal protein S4 [Staphylococcus aureus A8796] gi|298694988|gb|ADI98210.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ED133] gi|300887070|gb|EFK82271.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus TCH70] gi|302333384|gb|ADL23577.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus JKD6159] gi|304340795|gb|EFM06724.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830098|emb|CBX34940.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130645|gb|EFT86631.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus CGS03] gi|315197186|gb|EFU27525.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus CGS01] gi|320141663|gb|EFW33498.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143817|gb|EFW35590.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus MRSA177] gi|323440736|gb|EGA98445.1| 30S ribosomal protein S4 [Staphylococcus aureus O11] gi|323442976|gb|EGB00598.1| 30S ribosomal protein S4 [Staphylococcus aureus O46] gi|329314393|gb|AEB88806.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus T0131] gi|329726987|gb|EGG63444.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus 21189] gi|329727555|gb|EGG64011.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus 21172] gi|329733129|gb|EGG69466.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus 21193] Length = 200 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K G I V++KS++L ++E+ ++ VPEY++ + D++ TFV Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200 >gi|90020630|ref|YP_526457.1| 30S ribosomal protein S4P [Saccharophagus degradans 2-40] gi|123277582|sp|Q21M34|RS4_SACD2 RecName: Full=30S ribosomal protein S4 gi|89950230|gb|ABD80245.1| SSU ribosomal protein S4P [Saccharophagus degradans 2-40] Length = 206 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + P+ ++ PG HGQ R+ + S +G+QLR KQ Sbjct: 1 MARYIGPTCKLSRREGTDLFLKSGVRPLESKCKAEAAPGQHGQ-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARIKGATGENLLKLLEGRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVNG++VNI S++ GDVI V++KSK + + +A +R E++ VN + Sbjct: 119 SHKAILVNGKTVNIPSFQVNVGDVISVREKSKNQLRIQNSLGIAGQRADVEWVDVNTEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P P + NL+VE YS+ Sbjct: 179 EGVFKRCPDRAD---LPAEINENLIVELYSK 206 >gi|323344662|ref|ZP_08084886.1| 30S ribosomal protein S4 [Prevotella oralis ATCC 33269] gi|323093932|gb|EFZ36509.1| 30S ribosomal protein S4 [Prevotella oralis ATCC 33269] Length = 201 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K K KI RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MAKYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRKKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F+ A ++ G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFERAAKADGITGEVLLQNLESRLDNVVFRLGLAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G+ VNI SY K G ++ V++K+K L + A +I + ++ F+ Sbjct: 119 IVVDGKVVNIPSYSVKPGQIVGVREKAKSLEVIETALAGFNHSKYPWIEWDDNSKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|254509448|ref|ZP_05121526.1| ribosomal protein S4 [Vibrio parahaemolyticus 16] gi|323495528|ref|ZP_08100602.1| 30S ribosomal protein S4 [Vibrio sinaloensis DSM 21326] gi|219547621|gb|EED24668.1| ribosomal protein S4 [Vibrio parahaemolyticus 16] gi|323319409|gb|EGA72346.1| 30S ribosomal protein S4 [Vibrio sinaloensis DSM 21326] Length = 206 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+++ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVAIREKAQKQSRIKAALEVAEQREKPTWIEVDGGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206 >gi|315303380|ref|ZP_07873992.1| ribosomal protein S4 [Listeria ivanovii FSL F6-596] gi|313628248|gb|EFR96769.1| ribosomal protein S4 [Listeria ivanovii FSL F6-596] Length = 200 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQ KQK++ Sbjct: 1 MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ F +A + +G N + LE RLD IVYR T AARQ VNH H Sbjct: 60 MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY+ G VI V++KS + +++ E+ ++ VP+Y++ + + + + Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLDVSSF-VPDYVTFDAETLTGSLN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP + + +VEFYSR Sbjct: 178 RIPERSE---LAAEINEAFIVEFYSR 200 >gi|311069452|ref|YP_003974375.1| 30S ribosomal protein S4 [Bacillus atrophaeus 1942] gi|310869969|gb|ADP33444.1| 30S ribosomal protein S4 [Bacillus atrophaeus 1942] Length = 200 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + L++RLD +VY+ T ARQ VNH H Sbjct: 60 MYG-VNERQFRTLFDKAAKLTGKHGENFMILLDARLDNLVYKLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I SY+ K G I V++KS+ L+ V E+ ++ VPEY++ + + + + Sbjct: 119 ILVDGSRVDIPSYQVKPGQTIGVREKSRNLSIVKESVEV-NNFVPEYLTFDAEKLEGSLT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200 >gi|15599435|ref|NP_252929.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa PAO1] gi|107103755|ref|ZP_01367673.1| hypothetical protein PaerPA_01004826 [Pseudomonas aeruginosa PACS2] gi|116052274|ref|YP_788880.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889432|ref|YP_002438296.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa LESB58] gi|254237103|ref|ZP_04930426.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa C3719] gi|254242910|ref|ZP_04936232.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 2192] gi|296387204|ref|ZP_06876703.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa PAb1] gi|313111393|ref|ZP_07797198.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 39016] gi|12230936|sp|O52759|RS4_PSEAE RecName: Full=30S ribosomal protein S4 gi|122261423|sp|Q02T56|RS4_PSEAB RecName: Full=30S ribosomal protein S4 gi|226699107|sp|B7V667|RS4_PSEA8 RecName: Full=30S ribosomal protein S4 gi|9950456|gb|AAG07627.1|AE004841_5 30S ribosomal protein S4 [Pseudomonas aeruginosa PAO1] gi|115587495|gb|ABJ13510.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa UCBPP-PA14] gi|126169034|gb|EAZ54545.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa C3719] gi|126196288|gb|EAZ60351.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 2192] gi|218769655|emb|CAW25415.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa LESB58] gi|310883700|gb|EFQ42294.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 39016] Length = 206 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HGQ R+ + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQ-RRGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++EA R +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQEASRRKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ K GDV+ V++KSK + +A +L +R E++ V+ D Sbjct: 119 SHKAITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALELCGQRGRVEWVEVDLDKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P+ + NL+VE YS+ Sbjct: 179 AGTFKSAPARSD---LSADINENLIVELYSK 206 >gi|297618356|ref|YP_003703515.1| ribosomal protein S4 [Syntrophothermus lipocalidus DSM 12680] gi|297146193|gb|ADI02950.1| ribosomal protein S4 [Syntrophothermus lipocalidus DSM 12680] Length = 209 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + K + + Y PG HG+ R+ KPS +G QLR Sbjct: 1 MGRYTGPACRLCRREGIKLYLKAERCYSEKCALERKPYIPGQHGRGRRGKPSEYGSQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG I E++FR+ F++A+R G T NL++ LE RLD +VYR F + ARQ Sbjct: 61 KQKAKRIYG-ILERQFRNYFEKAERQPGITGENLLALLERRLDNVVYRLGFAGSRPEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173 + H H L+NGR VNI S K GDVI+VK+KS + A E +Q A + PE++ VN D Sbjct: 120 LITHGHFLLNGRKVNIPSILVKVGDVIQVKEKSMESAKFKELQAQAAYKTPPEWLEVNAD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ + +P + + +L+VE YSR Sbjct: 180 NLSGRVLALPRRDQ---IDAPIDEHLIVELYSR 209 >gi|33152930|ref|NP_874283.1| 30S ribosomal protein S4 [Haemophilus ducreyi 35000HP] gi|41017830|sp|Q7VKF7|RS4_HAEDU RecName: Full=30S ribosomal protein S4 gi|33149155|gb|AAP96672.1| 30S ribosomal protein S4 [Haemophilus ducreyi 35000HP] Length = 208 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E++FR+ + EA+R +G+T NL+ LE RLD +VYR F T ARQ Sbjct: 60 KQKVRRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V+H+ ++VNGR VNI SY+ DV+ V++KSK+ A + + +LA +R+ P ++ V+ Sbjct: 119 LVSHKSIVVNGRVVNIPSYQVSVDDVVTVREKSKKQARIKASLELASQREKPTWLEVDAV 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F R P + +L+VE YS+ Sbjct: 179 KMEGVFKRTPERSD---LSADINEHLIVELYSK 208 >gi|218779737|ref|YP_002431055.1| ribosomal protein S4 [Desulfatibacillum alkenivorans AK-01] gi|226697835|sp|B8FER0|RS4_DESAA RecName: Full=30S ribosomal protein S4 gi|218761121|gb|ACL03587.1| ribosomal protein S4 [Desulfatibacillum alkenivorans AK-01] Length = 208 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S +I RR L+ + K + RSY PG HGQ R++K S +G+QLR Sbjct: 1 MARYRGSVCRICRRENLKLFLKGDRCYSDKCAFDRRSYPPGQHGQ-RRTKISDYGIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG ++EK+F FK+AD ++G T NL+ LE RLD ++YR F ARQ Sbjct: 60 KQKIKRMYG-LTEKQFHLTFKKADHAKGITGTNLLVNLERRLDNVIYRLGFADCRTQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H VNG VNI S + GD IEV++KS+ +A + A + A R +P+++ ++ Sbjct: 119 MVRHNHFTVNGHKVNIPSAQVSIGDTIEVREKSRTVAVITNAMEAVARRGLPQWLELDKA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N P +D+ P MQ L+VE YS+ Sbjct: 179 NFKGVVNAYPVR-EDLTMP--MQEQLIVELYSK 208 >gi|156310431|ref|XP_001617741.1| hypothetical protein NEMVEDRAFT_v1g156832 [Nematostella vectensis] gi|156195585|gb|EDO25641.1| predicted protein [Nematostella vectensis] Length = 207 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 15/213 (7%) Query: 2 SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 ++ K K+ RR G +L+ + KS +T+ PG HG+ + S FGLQLR Sbjct: 2 ARYIGPKAKLSRREGTDLFLKSARRSIADKSKFDTK---PGQHGRTSGQRTSDFGLQLRE 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR F+ AD+ +G+T NL+S LESRLD +VYR F T ARQ Sbjct: 59 KQKVKRMYGVL-EKQFRRYFEAADKKKGNTGANLLSLLESRLDNVVYRMGFGSTRSEARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V+H+ + VNG+SVNI SY K GDV+ V++KSK+ A ++EA QLA + P ++ V+ D Sbjct: 118 LVSHKAITVNGQSVNIPSYMVKVGDVVAVREKSKKQARIVEALQLAGQVGFPAWVEVSAD 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF + P + + + +L+VE YSR Sbjct: 178 KAEGTFKKSPDRDE---FGADINESLIVELYSR 207 >gi|24371853|ref|NP_715895.1| 30S ribosomal protein S4 [Shewanella oneidensis MR-1] gi|113968568|ref|YP_732361.1| 30S ribosomal protein S4 [Shewanella sp. MR-4] gi|114045731|ref|YP_736281.1| 30S ribosomal protein S4 [Shewanella sp. MR-7] gi|26399362|sp|P59131|RS4_SHEON RecName: Full=30S ribosomal protein S4 gi|123030061|sp|Q0HNR3|RS4_SHESM RecName: Full=30S ribosomal protein S4 gi|123326989|sp|Q0I081|RS4_SHESR RecName: Full=30S ribosomal protein S4 gi|24345670|gb|AAN53340.1|AE015474_3 ribosomal protein S4 [Shewanella oneidensis MR-1] gi|113883252|gb|ABI37304.1| SSU ribosomal protein S4P [Shewanella sp. MR-4] gi|113887173|gb|ABI41224.1| SSU ribosomal protein S4P [Shewanella sp. MR-7] Length = 206 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLESAPGQHGA-RKPRLSEYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ V+VNGR VNI S++ DV+ +++KS+ A + A + A+R+ P ++ V+ M Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + L+VE YS+ Sbjct: 179 EGAFKRIPERSD---LSAEINEQLIVELYSK 206 >gi|34541515|ref|NP_905994.1| 30S ribosomal protein S4 [Porphyromonas gingivalis W83] gi|188995706|ref|YP_001929958.1| 30S ribosomal protein S4 [Porphyromonas gingivalis ATCC 33277] gi|41017819|sp|Q7MTN9|RS4_PORGI RecName: Full=30S ribosomal protein S4 gi|226699103|sp|B2RLW6|RS4_PORG3 RecName: Full=30S ribosomal protein S4 gi|34397832|gb|AAQ66893.1| ribosomal protein S4 [Porphyromonas gingivalis W83] gi|188595386|dbj|BAG34361.1| 30S ribosomal protein S4 [Porphyromonas gingivalis ATCC 33277] Length = 201 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ G+ ++G K ++ ++Y PG HG R+ K S +GLQLR KQK K Sbjct: 1 MARYTGPKSKIARKFGDPIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGLQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +F A R++G T LI FLE+RLD +V+R PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRHLFHRAQRAKGVTGELLIQFLEARLDNVVFRLGIAPTRSAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G VNI SY K G VI V+++SK L + +A ++ + ++ + Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVRERSKSLEVIADALTGFNHSKYPWMEWDQSSLSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ L+VE YS+ Sbjct: 179 HMPDRTD---IPENIKEQLIVELYSK 201 >gi|254362773|ref|ZP_04978855.1| ribosomal protein S4 [Mannheimia haemolytica PHL213] gi|261492716|ref|ZP_05989264.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495669|ref|ZP_05992115.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094402|gb|EDN75251.1| ribosomal protein S4 [Mannheimia haemolytica PHL213] gi|261308776|gb|EEY10033.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311569|gb|EEY12724.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 208 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54 M++ K K+ RR G +L+ + + ++ PG HG RK + S +G QLR Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E++FR+ + EA+R +G+T NL+ LE RLD +VYR F T ARQ Sbjct: 60 KQKVRRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V+H+ ++VNGR VNI S++ DV+ V++KSK+ A + + +LA +R+ P ++ V+ Sbjct: 119 LVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDAT 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F R P + +L+VE YS+ Sbjct: 179 KMEGVFKRRPERSD---LSADINEHLIVELYSK 208 >gi|220928235|ref|YP_002505144.1| ribosomal protein S4 [Clostridium cellulolyticum H10] gi|254764580|sp|B8I807|RS4_CLOCE RecName: Full=30S ribosomal protein S4 gi|219998563|gb|ACL75164.1| ribosomal protein S4 [Clostridium cellulolyticum H10] Length = 208 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR GE L+ + K V R Y PG HGQ RK Y G+QLR Sbjct: 1 MARYTDASCRLCRREGEKLFLKGERCYTDKCSVARRPYAPGQHGQGRKKMSEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 K K++++YG + E +F F+ A R +G T NL+ LE+RLD +VYR + +RQ Sbjct: 60 KAKVRRFYGVL-EGQFSKYFEVASRRKGITGENLLQILETRLDNVVYRLGLGTSRPESRQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHD 173 V H H VNG+ VNI SY K GDVI V SK V ++A V P+++ + + Sbjct: 119 LVTHGHFTVNGKRVNIPSYLIKVGDVIAVADNSKNSPKVKSIREIAGGKVIPKWLEFDEE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V V +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGKVVALPAR-EDIDLP--IKEHLIVELYSK 208 >gi|33357881|pdb|1P6G|D Chain D, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357958|pdb|1P87|D Chain D, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754042|pdb|2AVY|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754098|pdb|2AW7|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138056|pdb|2I2P|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138127|pdb|2I2U|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|157836026|pdb|2QOU|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836077|pdb|2QOW|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836130|pdb|2QOY|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836181|pdb|2QP0|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429701|pdb|2QAL|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429753|pdb|2QAN|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429811|pdb|2QB9|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429863|pdb|2QBB|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429915|pdb|2QBD|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429967|pdb|2QBF|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430021|pdb|2QBH|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430074|pdb|2QBJ|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431374|pdb|2Z4K|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431427|pdb|2Z4M|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988791|pdb|2VHO|D Chain D, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 3 Of 4) gi|168988812|pdb|2VHP|D Chain D, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 4 Of 4) gi|197107281|pdb|3DF1|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The First 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107333|pdb|3DF3|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|224510725|pdb|3FIH|D Chain D, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 30s Subunit, Trnas And The Ternary Complex. gi|294662220|pdb|2WWL|D Chain D, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 30s, The P-Site Trna And The Tnac Leader Peptide (Part 1 Of 2). gi|308387968|pdb|3OFO|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308387989|pdb|3OFP|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320026|pdb|3OFA|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320047|pdb|3OFB|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320130|pdb|3OFX|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320151|pdb|3OFY|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The Second 70s Ribosome gi|315113615|pdb|3OAQ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|315113636|pdb|3OAR|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|329665995|pdb|3J00|D Chain D, Structure Of The Ribosome-Secye Complex In The Membrane Environment Length = 205 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 126/210 (60%), Gaps = 10/210 (4%) Query: 2 SKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQK 57 ++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK Sbjct: 1 ARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQK 59 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+ Sbjct: 60 VRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVS 118 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMV 176 H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 HKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKME 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 GTFKRKPERSD---LSADINEHLIVELYSK 205 >gi|16800706|ref|NP_470974.1| 30S ribosomal protein S4 [Listeria innocua Clip11262] gi|226224197|ref|YP_002758304.1| ribosomal protein S4 [Listeria monocytogenes Clip81459] gi|26399441|sp|Q92BB2|RS4_LISIN RecName: Full=30S ribosomal protein S4 gi|259495285|sp|C1KVP3|RS4_LISMC RecName: Full=30S ribosomal protein S4 gi|16414125|emb|CAC96869.1| ribosomal protein S4 [Listeria innocua Clip11262] gi|225876659|emb|CAS05368.1| ribosomal protein S4 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|313618704|gb|EFR90630.1| ribosomal protein S4 [Listeria innocua FSL S4-378] Length = 200 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQ KQK++ Sbjct: 1 MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ F +A + +G N + LE RLD IVYR T AARQ VNH H Sbjct: 60 MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY+ G VI V++KS + +++ E+ +++ VPEY++ + + + + Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAETLTGSLN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200 >gi|88812733|ref|ZP_01127979.1| 30S ribosomal protein S4 [Nitrococcus mobilis Nb-231] gi|88789971|gb|EAR21092.1| 30S ribosomal protein S4 [Nitrococcus mobilis Nb-231] Length = 206 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + + P++ + PG HGQ R+ + S +GLQLR KQ Sbjct: 1 MARYTGPTCKLARREGTDLFLKSRVRPLDNKCKLDTPPGQHGQ-RRGRISDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR +KEADR +G+T L+ LESRLD VYR F T ARQ V Sbjct: 60 KVRRTYGVL-ERQFRKYYKEADRRKGNTGETLLQLLESRLDNTVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 NHR +LVNGR NI S GD++ VK+K+K+ V A ++A++ +P ++ V+ Sbjct: 119 NHRAILVNGRVSNISSRILNPGDLVSVKEKAKKQLRVQAALEMAQQIGLPAWVEVDTKQF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRMPDRSD---LSADINEHLIVELYSK 206 >gi|303237525|ref|ZP_07324090.1| ribosomal protein S4 [Prevotella disiens FB035-09AN] gi|302482345|gb|EFL45375.1| ribosomal protein S4 [Prevotella disiens FB035-09AN] Length = 202 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K + R++ PG HG R+ K S +G QL KQK K Sbjct: 1 MARYIGPKSRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F A ++ G T L+ LESRLD +VYR PT AARQ VNH+H Sbjct: 60 TYGVL-ERQFRNMFDRAAKASGITGEVLLQNLESRLDNVVYRLGLAPTRAAARQLVNHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNG VNI SY K GD++ V++K+K L + A +I + ++ F+ Sbjct: 119 IVVNGGVVNIASYAVKAGDIVGVREKAKSLEVIEAALAGFNHSKYPWIEWDENSKSGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ P ++ L+VE YS+ Sbjct: 179 HQPAR---EDIPENIKEQLIVELYSK 201 >gi|298207752|ref|YP_003715931.1| 30S ribosomal protein S4 [Croceibacter atlanticus HTCC2559] gi|83850390|gb|EAP88258.1| 30S ribosomal protein S4 [Croceibacter atlanticus HTCC2559] Length = 201 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLAEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR +FK+A + G T L+ ESRLD +VYR P+ ARQ V+HR Sbjct: 60 YTYG-ILERQFRGLFKKATAATGITGEVLLQLCESRLDNVVYRMGISPSRPGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY+ K GDV+ V++KSK L ++ + V E+I+ N++ T+ Sbjct: 119 HITVNGELVNIPSYQLKAGDVVGVREKSKSLDAIQSSLS-NNSTVYEWITWNNEKKEGTY 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P V P + +VE YS+ Sbjct: 178 VSVPGR---VQIPENINEQFIVELYSK 201 >gi|126176331|ref|YP_001052480.1| 30S ribosomal protein S4 [Shewanella baltica OS155] gi|152998773|ref|YP_001364454.1| 30S ribosomal protein S4 [Shewanella baltica OS185] gi|160873349|ref|YP_001552665.1| 30S ribosomal protein S4 [Shewanella baltica OS195] gi|217975177|ref|YP_002359928.1| 30S ribosomal protein S4 [Shewanella baltica OS223] gi|304412788|ref|ZP_07394390.1| ribosomal protein S4 [Shewanella baltica OS183] gi|307307452|ref|ZP_07587187.1| ribosomal protein S4 [Shewanella baltica BA175] gi|171704521|sp|A6WHV2|RS4_SHEB8 RecName: Full=30S ribosomal protein S4 gi|171769980|sp|A3DA48|RS4_SHEB5 RecName: Full=30S ribosomal protein S4 gi|189045397|sp|A9KWC5|RS4_SHEB9 RecName: Full=30S ribosomal protein S4 gi|254764609|sp|B8EBI1|RS4_SHEB2 RecName: Full=30S ribosomal protein S4 gi|125999536|gb|ABN63611.1| SSU ribosomal protein S4P [Shewanella baltica OS155] gi|151363391|gb|ABS06391.1| ribosomal protein S4 [Shewanella baltica OS185] gi|160858871|gb|ABX47405.1| ribosomal protein S4 [Shewanella baltica OS195] gi|217500312|gb|ACK48505.1| ribosomal protein S4 [Shewanella baltica OS223] gi|304348868|gb|EFM13284.1| ribosomal protein S4 [Shewanella baltica OS183] gi|306910240|gb|EFN40673.1| ribosomal protein S4 [Shewanella baltica BA175] gi|315265577|gb|ADT92430.1| ribosomal protein S4 [Shewanella baltica OS678] Length = 206 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R++G+T NL+ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARTKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ ++VNGR VNI S++ DV+ +++KS+ A + A + A+R+ P ++ V++ M Sbjct: 119 SHKSIMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDNAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRVPERSD---LSAEINEQLIVELYSK 206 >gi|255319791|ref|ZP_05360996.1| ribosomal protein S4 [Acinetobacter radioresistens SK82] gi|262380324|ref|ZP_06073478.1| ribosomal protein S4 [Acinetobacter radioresistens SH164] gi|255303110|gb|EET82322.1| ribosomal protein S4 [Acinetobacter radioresistens SK82] gi|262297770|gb|EEY85685.1| ribosomal protein S4 [Acinetobacter radioresistens SH164] Length = 207 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R + Y LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHAKAPGQHGQSRAKQSEY-SLQLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 60 QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 118 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P +I V+H Sbjct: 119 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKSAIELAAQRGIPAWIEVDHSK 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P P + +L+VE YS+ Sbjct: 179 FEGTFKAAPDRSD---LPAEINESLIVELYSK 207 >gi|47093459|ref|ZP_00231223.1| ribosomal protein S4 [Listeria monocytogenes str. 4b H7858] gi|47096809|ref|ZP_00234391.1| ribosomal protein S4 [Listeria monocytogenes str. 1/2a F6854] gi|217964250|ref|YP_002349928.1| ribosomal protein S4 [Listeria monocytogenes HCC23] gi|224499177|ref|ZP_03667526.1| 30S ribosomal protein S4 [Listeria monocytogenes Finland 1988] gi|224501464|ref|ZP_03669771.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL R2-561] gi|254824345|ref|ZP_05229346.1| ribosomal protein S4 [Listeria monocytogenes FSL J1-194] gi|254828169|ref|ZP_05232856.1| ribosomal protein S4 [Listeria monocytogenes FSL N3-165] gi|254831997|ref|ZP_05236652.1| 30S ribosomal protein S4 [Listeria monocytogenes 10403S] gi|254898237|ref|ZP_05258161.1| 30S ribosomal protein S4 [Listeria monocytogenes J0161] gi|254912270|ref|ZP_05262282.1| ribosomal protein S4 [Listeria monocytogenes J2818] gi|254931536|ref|ZP_05264895.1| ribosomal protein S4 [Listeria monocytogenes HPB2262] gi|254936597|ref|ZP_05268294.1| ribosomal protein S4 [Listeria monocytogenes F6900] gi|254993888|ref|ZP_05276078.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL J2-064] gi|255026363|ref|ZP_05298349.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL J2-003] gi|255522552|ref|ZP_05389789.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL J1-175] gi|284801988|ref|YP_003413853.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5578] gi|284995130|ref|YP_003416898.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5923] gi|290893191|ref|ZP_06556178.1| ribosomal protein S4 [Listeria monocytogenes FSL J2-071] gi|300765979|ref|ZP_07075950.1| ribosomal protein S4 [Listeria monocytogenes FSL N1-017] gi|315282534|ref|ZP_07870925.1| ribosomal protein S4 [Listeria marthii FSL S4-120] gi|254764594|sp|B8DHE5|RS4_LISMH RecName: Full=30S ribosomal protein S4 gi|47014842|gb|EAL05793.1| ribosomal protein S4 [Listeria monocytogenes str. 1/2a F6854] gi|47018187|gb|EAL08956.1| ribosomal protein S4 [Listeria monocytogenes str. 4b H7858] gi|217333520|gb|ACK39314.1| ribosomal protein S4 [Listeria monocytogenes HCC23] gi|258600556|gb|EEW13881.1| ribosomal protein S4 [Listeria monocytogenes FSL N3-165] gi|258609194|gb|EEW21802.1| ribosomal protein S4 [Listeria monocytogenes F6900] gi|284057550|gb|ADB68491.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5578] gi|284060597|gb|ADB71536.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5923] gi|290557173|gb|EFD90700.1| ribosomal protein S4 [Listeria monocytogenes FSL J2-071] gi|293583091|gb|EFF95123.1| ribosomal protein S4 [Listeria monocytogenes HPB2262] gi|293590249|gb|EFF98583.1| ribosomal protein S4 [Listeria monocytogenes J2818] gi|293593579|gb|EFG01340.1| ribosomal protein S4 [Listeria monocytogenes FSL J1-194] gi|300513297|gb|EFK40373.1| ribosomal protein S4 [Listeria monocytogenes FSL N1-017] gi|307571182|emb|CAR84361.1| ribosomal protein S4 [Listeria monocytogenes L99] gi|313608550|gb|EFR84435.1| ribosomal protein S4 [Listeria monocytogenes FSL F2-208] gi|313613822|gb|EFR87575.1| ribosomal protein S4 [Listeria marthii FSL S4-120] gi|313623582|gb|EFR93757.1| ribosomal protein S4 [Listeria innocua FSL J1-023] gi|328464963|gb|EGF36242.1| 30S ribosomal protein S4 [Listeria monocytogenes 1816] gi|328474830|gb|EGF45634.1| 30S ribosomal protein S4 [Listeria monocytogenes 220] Length = 200 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQ KQK++ Sbjct: 1 MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ F +A + +G N + LE RLD IVYR T AARQ VNH H Sbjct: 60 MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY+ G VI V++KS + +++ E+ +++ VPEY++ + + + + Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAEKLTGSLN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200 >gi|327439214|dbj|BAK15579.1| ribosomal protein S4 [Solibacillus silvestris StLB046] Length = 200 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + K S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGISLSGTGKE-IAKRPYAPGQHGPNSRGKKSEYGLQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ + A + +G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFKNTYLRAGKLQGVHGENFMILLETRLDNLVYRLGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I SY K G I +++KS L+ V E+ ++ VPEY+S + D+ V TFV Sbjct: 119 ILVDGNRVDIPSYSVKPGQTISLREKSANLSVVAESIEV-NSFVPEYLSFDADSKVGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 178 RLPERSE---LSSEINEQFIVEFYSR 200 >gi|222098129|ref|YP_002532186.1| 30S ribosomal protein s4 [Bacillus cereus Q1] gi|254764569|sp|B9J159|RS4_BACCQ RecName: Full=30S ribosomal protein S4 gi|221242187|gb|ACM14897.1| ribosomal protein S4 (30S ribosomal protein S4) [Bacillus cereus Q1] Length = 200 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 ITVDGSRVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200 >gi|56460992|ref|YP_156273.1| 30S ribosomal protein S4 [Idiomarina loihiensis L2TR] gi|61215388|sp|Q5QXV7|RS4_IDILO RecName: Full=30S ribosomal protein S4 gi|56180002|gb|AAV82724.1| Ribosomal protein S4 [Idiomarina loihiensis L2TR] Length = 206 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIETAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ V+VNG+ VNI S++ + DV+ V++K+K+ A + A +LAE R+ P +I V+++ + Sbjct: 119 SHKAVVVNGQVVNIPSFKVRPEDVVSVREKAKKQARIGAALELAEQREKPVWIEVDNNKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206 >gi|268316434|ref|YP_003290153.1| 30S ribosomal protein S4 [Rhodothermus marinus DSM 4252] gi|262333968|gb|ACY47765.1| ribosomal protein S4 [Rhodothermus marinus DSM 4252] Length = 200 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 127/206 (61%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K + + Y PG HG+ R++K S + +QL+ KQK+K Sbjct: 1 MARYRGPKQKIARRFGEPIFGPSK-ALERKPYPPGQHGRTRRAKESEYAVQLKEKQKVKH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A R +G T NL+ LE+RLD VYR F T ARQ V HRH Sbjct: 60 IYG-LLERQFRNLFEKATRKKGITGENLLKMLEARLDNTVYRMGFARTRRQARQLVVHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNG+ VN+ SY+ + GDV+ V+ KS+QLA + E + R+ P ++ V+ M F+ Sbjct: 119 IMVNGQVVNVPSYQLRPGDVVAVRPKSRQLAVIQENIKRLRRNFP-WLEVDRKEMQGKFL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ P ++ +L+VE YS+ Sbjct: 178 DYPNR---EDIPENIREHLIVELYSK 200 >gi|328951209|ref|YP_004368544.1| ribosomal protein S4 [Marinithermus hydrothermalis DSM 14884] gi|328451533|gb|AEB12434.1| ribosomal protein S4 [Marinithermus hydrothermalis DSM 14884] Length = 205 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + +I RR+G N+ K ++ R Y PG HGQRR +PS + ++LR KQK+ Sbjct: 1 MGRYRGPVVRIARRLGINIAETEKVQRYMDRRPYPPGQHGQRRSRRPSDYAVRLREKQKL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ++EK+FR++F+EA R +G T + LESRLD +V+R T ARQFV H Sbjct: 61 RYLYG-LNEKQFRNLFEEATRKKGVTGTVFLQLLESRLDNVVFRLGIATTRRQARQFVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 RH+LVNG+ V+ SYR K GDVI V ++SK+L E ++ A+ R +P ++ + + M Sbjct: 120 RHILVNGKRVDRPSYRVKPGDVISVAERSKKLVVFQENAEAAKRRKLPMWLEYDPETMTG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FVR+P + + + LV+E+YSR Sbjct: 180 KFVRLPERDE---LAIPVNEQLVIEYYSR 205 >gi|300309481|ref|YP_003773573.1| 30S ribosomal protein S4 [Herbaspirillum seropedicae SmR1] gi|300072266|gb|ADJ61665.1| 30S ribosomal subunit S4 protein [Herbaspirillum seropedicae SmR1] Length = 207 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +G QLR KQ Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 61 KVKRMYGVL-ERQFRRYFAEADRRKGNTGETLLKLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175 +H+ + VNG+ VNI SY K GDVI V++K+K+ + EA LAE + P+++SV+ + Sbjct: 120 SHKALTVNGQVVNIASYSVKAGDVIAVREKAKKQVRIAEALSLAESNGFPQWVSVDSKKL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + + +L+VE YSR Sbjct: 180 EGTFKSSPDRSE---IAADVNESLIVELYSR 207 >gi|116873025|ref|YP_849806.1| 30S ribosomal protein S4 [Listeria welshimeri serovar 6b str. SLCC5334] gi|289434877|ref|YP_003464749.1| ribosomal protein S4 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|123466377|sp|A0AJ45|RS4_LISW6 RecName: Full=30S ribosomal protein S4 gi|116741903|emb|CAK21027.1| 30S ribosomal protein S4 [Listeria welshimeri serovar 6b str. SLCC5334] gi|289171121|emb|CBH27663.1| ribosomal protein S4 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313633056|gb|EFR99970.1| ribosomal protein S4 [Listeria seeligeri FSL N1-067] gi|313638010|gb|EFS03298.1| ribosomal protein S4 [Listeria seeligeri FSL S4-171] Length = 200 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQ KQK++ Sbjct: 1 MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ F +A + +G N + LE RLD IVYR T AARQ VNH H Sbjct: 60 MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY+ G VI V++KS + +++ E+ ++ VPEY++ + + + + Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLDVSSF-VPEYVTFDAETLTGSLN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP + + +VEFYSR Sbjct: 178 RIPERSE---LAAEINEAFIVEFYSR 200 >gi|253734496|ref|ZP_04868661.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus TCH130] gi|253727550|gb|EES96279.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus TCH130] Length = 200 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K G I V++KS++L ++E+ ++ VPEY++ + D++ TF+ Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIIESVEI-NNFVPEYLNFDADSLTGTFI 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200 >gi|30264729|ref|NP_847106.1| 30S ribosomal protein S4 [Bacillus anthracis str. Ames] gi|42783839|ref|NP_981086.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 10987] gi|47530203|ref|YP_021552.1| 30S ribosomal protein S4 [Bacillus anthracis str. 'Ames Ancestor'] gi|49187548|ref|YP_030801.1| 30S ribosomal protein S4 [Bacillus anthracis str. Sterne] gi|49481409|ref|YP_038704.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140852|ref|YP_085977.1| 30S ribosomal protein S4 [Bacillus cereus E33L] gi|65322027|ref|ZP_00394986.1| COG0522: Ribosomal protein S4 and related proteins [Bacillus anthracis str. A2012] gi|118479796|ref|YP_896947.1| 30S ribosomal protein S4 [Bacillus thuringiensis str. Al Hakam] gi|165869836|ref|ZP_02214494.1| ribosomal protein S4 [Bacillus anthracis str. A0488] gi|167633851|ref|ZP_02392174.1| ribosomal protein S4 [Bacillus anthracis str. A0442] gi|167638038|ref|ZP_02396316.1| ribosomal protein S4 [Bacillus anthracis str. A0193] gi|170685670|ref|ZP_02876893.1| ribosomal protein S4 [Bacillus anthracis str. A0465] gi|170705531|ref|ZP_02895995.1| ribosomal protein S4 [Bacillus anthracis str. A0389] gi|177651189|ref|ZP_02934020.1| ribosomal protein S4 [Bacillus anthracis str. A0174] gi|190568368|ref|ZP_03021276.1| ribosomal protein S4 [Bacillus anthracis Tsiankovskii-I] gi|196032907|ref|ZP_03100320.1| ribosomal protein S4 [Bacillus cereus W] gi|196040797|ref|ZP_03108095.1| ribosomal protein S4 [Bacillus cereus NVH0597-99] gi|218905885|ref|YP_002453719.1| ribosomal protein S4 [Bacillus cereus AH820] gi|225866636|ref|YP_002752014.1| 30S ribosomal protein S4 [Bacillus cereus 03BB102] gi|227817448|ref|YP_002817457.1| 30S ribosomal protein S4 [Bacillus anthracis str. CDC 684] gi|228917301|ref|ZP_04080856.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929709|ref|ZP_04092726.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935965|ref|ZP_04098775.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948386|ref|ZP_04110669.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228987906|ref|ZP_04148014.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229093753|ref|ZP_04224852.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-42] gi|229124225|ref|ZP_04253417.1| 30S ribosomal protein S4 [Bacillus cereus 95/8201] gi|229158263|ref|ZP_04286330.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 4342] gi|229186914|ref|ZP_04314069.1| 30S ribosomal protein S4 [Bacillus cereus BGSC 6E1] gi|229602554|ref|YP_002868937.1| 30S ribosomal protein S4 [Bacillus anthracis str. A0248] gi|254687468|ref|ZP_05151324.1| 30S ribosomal protein S4 [Bacillus anthracis str. CNEVA-9066] gi|254725030|ref|ZP_05186813.1| 30S ribosomal protein S4 [Bacillus anthracis str. A1055] gi|254736768|ref|ZP_05194474.1| 30S ribosomal protein S4 [Bacillus anthracis str. Western North America USA6153] gi|254741805|ref|ZP_05199492.1| 30S ribosomal protein S4 [Bacillus anthracis str. Kruger B] gi|254754597|ref|ZP_05206632.1| 30S ribosomal protein S4 [Bacillus anthracis str. Vollum] gi|254757429|ref|ZP_05209456.1| 30S ribosomal protein S4 [Bacillus anthracis str. Australia 94] gi|300118469|ref|ZP_07056212.1| 30S ribosomal protein S4 [Bacillus cereus SJ1] gi|301056163|ref|YP_003794374.1| 30S ribosomal protein S4 [Bacillus anthracis CI] gi|38372415|sp|Q81KT2|RS4_BACAN RecName: Full=30S ribosomal protein S4 gi|61215457|sp|Q633E0|RS4_BACCZ RecName: Full=30S ribosomal protein S4 gi|61215551|sp|Q6HCM2|RS4_BACHK RecName: Full=30S ribosomal protein S4 gi|61215626|sp|Q72Z76|RS4_BACC1 RecName: Full=30S ribosomal protein S4 gi|152060934|sp|A0RJP7|RS4_BACAH RecName: Full=30S ribosomal protein S4 gi|226697800|sp|B7JS31|RS4_BACC0 RecName: Full=30S ribosomal protein S4 gi|254764566|sp|C3PBC1|RS4_BACAA RecName: Full=30S ribosomal protein S4 gi|254764567|sp|C3L9W4|RS4_BACAC RecName: Full=30S ribosomal protein S4 gi|254764568|sp|C1EV03|RS4_BACC3 RecName: Full=30S ribosomal protein S4 gi|30259404|gb|AAP28592.1| 30S ribosomal protein S4 [Bacillus anthracis str. Ames] gi|42739769|gb|AAS43694.1| ribosomal protein S4 [Bacillus cereus ATCC 10987] gi|47505351|gb|AAT34027.1| ribosomal protein S4 [Bacillus anthracis str. 'Ames Ancestor'] gi|49181475|gb|AAT56851.1| ribosomal protein S4 [Bacillus anthracis str. Sterne] gi|49332965|gb|AAT63611.1| ribosomal protein S4 (30S ribosomal protein S4) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974321|gb|AAU15871.1| ribosomal protein S4 (30S ribosomal protein S4) [Bacillus cereus E33L] gi|118419021|gb|ABK87440.1| SSU ribosomal protein S4P [Bacillus thuringiensis str. Al Hakam] gi|164714665|gb|EDR20184.1| ribosomal protein S4 [Bacillus anthracis str. A0488] gi|167513855|gb|EDR89223.1| ribosomal protein S4 [Bacillus anthracis str. A0193] gi|167530652|gb|EDR93354.1| ribosomal protein S4 [Bacillus anthracis str. A0442] gi|170129656|gb|EDS98519.1| ribosomal protein S4 [Bacillus anthracis str. A0389] gi|170670134|gb|EDT20874.1| ribosomal protein S4 [Bacillus anthracis str. A0465] gi|172083015|gb|EDT68077.1| ribosomal protein S4 [Bacillus anthracis str. A0174] gi|190560624|gb|EDV14601.1| ribosomal protein S4 [Bacillus anthracis Tsiankovskii-I] gi|195994336|gb|EDX58291.1| ribosomal protein S4 [Bacillus cereus W] gi|196028251|gb|EDX66860.1| ribosomal protein S4 [Bacillus cereus NVH0597-99] gi|218535551|gb|ACK87949.1| ribosomal protein S4 [Bacillus cereus AH820] gi|225790794|gb|ACO31011.1| 30S ribosomal protein S4 [Bacillus cereus 03BB102] gi|227006605|gb|ACP16348.1| 30S ribosomal protein S4 [Bacillus anthracis str. CDC 684] gi|228596651|gb|EEK54316.1| 30S ribosomal protein S4 [Bacillus cereus BGSC 6E1] gi|228625221|gb|EEK81981.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 4342] gi|228659527|gb|EEL15175.1| 30S ribosomal protein S4 [Bacillus cereus 95/8201] gi|228689638|gb|EEL43446.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-42] gi|228771829|gb|EEM20287.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228811373|gb|EEM57711.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823733|gb|EEM69555.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829888|gb|EEM75508.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842342|gb|EEM87435.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266962|gb|ACQ48599.1| 30S ribosomal protein S4 [Bacillus anthracis str. A0248] gi|298724141|gb|EFI64840.1| 30S ribosomal protein S4 [Bacillus cereus SJ1] gi|300378332|gb|ADK07236.1| 30S ribosomal protein S4 [Bacillus cereus biovar anthracis str. CI] Length = 200 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200 >gi|304404108|ref|ZP_07385770.1| ribosomal protein S4 [Paenibacillus curdlanolyticus YK9] gi|304347086|gb|EFM12918.1| ribosomal protein S4 [Paenibacillus curdlanolyticus YK9] Length = 200 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K K+ RR+G +L G K + R + PG HG + K S +G+QL+ KQK++ Sbjct: 1 MSRYTGPKFKLSRRLGISLSGTGKE-LAKRPFPPGQHGANLRKKISGYGVQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+FR++F A + +G + N + LESRLD +VYR F + ARQ V+H H Sbjct: 60 MYG-LNEKQFRNLFDRASKQKGISGENFMFLLESRLDNLVYRLGFANSRAGARQLVSHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SY GDVI ++++S+ + S+ EA + + VP Y+ +N + F+ Sbjct: 119 VTVNGKKVDIASYTVALGDVIGLRERSRSMKSIKEARE-SRSHVPNYLDLNEAALEGKFL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 178 RLPERAE---LSQDIDEKQIVEFYSR 200 >gi|304413169|ref|ZP_07394642.1| 30S ribosomal subunit protein S4 [Candidatus Regiella insecticola LSR1] gi|304284012|gb|EFL92405.1| 30S ribosomal subunit protein S4 [Candidatus Regiella insecticola LSR1] Length = 206 Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG K + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRTIDSKCKIDQPPGQHGA-HKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLGLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNGR VNI SY+ +I +++K+K+ + + A +L E R+ P ++ V+ M Sbjct: 119 SHKGILVNGRVVNIASYQVLPNAIISIREKAKKQSRIRAALELFEQREKPIWLEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R+P P + +L+VE YS+ Sbjct: 179 EGVYKRLPERTD---LPADINEHLIVELYSK 206 >gi|134294468|ref|YP_001118203.1| 30S ribosomal protein S4 [Burkholderia vietnamiensis G4] gi|134137625|gb|ABO53368.1| SSU ribosomal protein S4P [Burkholderia vietnamiensis G4] Length = 213 Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 125/213 (58%), Gaps = 15/213 (7%) Query: 2 SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 ++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 8 ARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLRE 64 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T ARQ Sbjct: 65 KQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEARQ 123 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V+H+ + VNG N+ S + K GDVI +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 124 LVSHKSITVNGVVANVPSQQVKAGDVIAIREKAKKQARIIEALSLAEQGGMPSWVAVDAK 183 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 184 KFEGTFKQMPERAD---IAGDINESLIVELYSR 213 >gi|206977164|ref|ZP_03238063.1| 30S ribosomal protein S4 [Bacillus cereus H3081.97] gi|217962143|ref|YP_002340713.1| 30S ribosomal protein S4 [Bacillus cereus AH187] gi|229141392|ref|ZP_04269930.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST26] gi|229198816|ref|ZP_04325510.1| 30S ribosomal protein S4 [Bacillus cereus m1293] gi|226697803|sp|B7HSJ2|RS4_BACC7 RecName: Full=30S ribosomal protein S4 gi|206744649|gb|EDZ56057.1| 30S ribosomal protein S4 [Bacillus cereus H3081.97] gi|217062938|gb|ACJ77188.1| ribosomal protein S4 [Bacillus cereus AH187] gi|228584652|gb|EEK42776.1| 30S ribosomal protein S4 [Bacillus cereus m1293] gi|228642173|gb|EEK98466.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST26] Length = 200 Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSSNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200 >gi|94312223|ref|YP_585433.1| 30S ribosomal protein S4 [Cupriavidus metallidurans CH34] gi|152112253|sp|Q1LI62|RS4_RALME RecName: Full=30S ribosomal protein S4 gi|93356075|gb|ABF10164.1| 30S ribosomal subunit protein S4 [Cupriavidus metallidurans CH34] Length = 207 Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ +LVNG ++N+ S + K GD++ V+++SK+ + EA LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGETLNVPSAQIKSGDIVSVREQSKKQVRIAEALSLAEQSGFPTWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ + P + +L+VE YSR Sbjct: 177 KKFEGTYKQAPDRAD---ISGDINESLIVELYSR 207 >gi|14278533|pdb|1I94|D Chain D, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 gi|14278554|pdb|1I95|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine gi|14278575|pdb|1I96|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) gi|14278597|pdb|1I97|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Tetracycline gi|20663889|pdb|1J5E|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit gi|27065879|pdb|1N32|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position At The A Site With Paromomycin gi|27065906|pdb|1N33|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position At The A Site With Paromomycin gi|27065933|pdb|1N34|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Codon And Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position gi|27065959|pdb|1N36|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Crystallographically Disordered Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position gi|34811532|pdb|1PNS|D Chain D, Crystal Structure Of A Streptomycin Dependent Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pns, Contains The 30s Subunit, Two Trnas, And One Mrna Molecule. The 50s Ribosomal Subunit Is In File 1pnu. gi|34811588|pdb|1PNX|D Chain D, Crystal Structure Of The Wild Type Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx, Contains Only Molecules Of The 30s Ribosomal Subunit. The 50s Subunit Is In The Pdb File 1pny. gi|56966326|pdb|1VOQ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966379|pdb|1VOS|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966432|pdb|1VOV|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966485|pdb|1VOX|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966538|pdb|1VOZ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|149241278|pdb|2E5L|D Chain D, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via The Shine- Dalgarno Interaction gi|224510686|pdb|3FIC|D Chain D, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 30s Subunit And The Ligands gi|226887632|pdb|2ZM6|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s Ribosomal Subunit gi|300508608|pdb|3MR8|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508663|pdb|3MS0|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s). gi|322812553|pdb|3PYN|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812606|pdb|3PYQ|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|322812659|pdb|3PYS|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812712|pdb|3PYU|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 208 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 11/211 (5%) Query: 3 KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 + ++ RR G L+ + PK + R Y PG HGQ+R +PS + ++LR KQ Sbjct: 2 RYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQ 61 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG ISE++FR++F+EA + +G T + LESRLD +VYR F + ARQ V Sbjct: 62 KLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLV 120 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 H H+ VNGR V++ SYR + GD I V +KS+ L + + + + R V ++S++ + M Sbjct: 121 RHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGM 180 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F+R+P +D+ PV LV+EFYSR Sbjct: 181 KGKFLRLPDR-EDLALPV--NEQLVIEFYSR 208 >gi|298500604|ref|ZP_07010408.1| SSU ribosomal protein S4 [Vibrio cholerae MAK 757] gi|297540773|gb|EFH76830.1| SSU ribosomal protein S4 [Vibrio cholerae MAK 757] Length = 206 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSRVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S+ DV+ V++K+K+ + + A ++AE R+ P +I V+ + M Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPTWIEVDVNTM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + L+VE YS+ Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206 >gi|114561360|ref|YP_748873.1| 30S ribosomal protein S4 [Shewanella frigidimarina NCIMB 400] gi|122301094|sp|Q089N0|RS4_SHEFN RecName: Full=30S ribosomal protein S4 gi|114332653|gb|ABI70035.1| SSU ribosomal protein S4P [Shewanella frigidimarina NCIMB 400] Length = 206 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEVRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ V+VNGR VNI S++ DV+ +++KS+ A + A ++A +R+ P ++ V++ M Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAGQREKPTWVEVDNAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRVPERSD---LSADINEQLIVELYSK 206 >gi|196044058|ref|ZP_03111295.1| ribosomal protein S4 [Bacillus cereus 03BB108] gi|196025394|gb|EDX64064.1| ribosomal protein S4 [Bacillus cereus 03BB108] gi|324328549|gb|ADY23809.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 200 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERSE---LPAEINEALIVEFYSR 200 >gi|91216885|ref|ZP_01253849.1| 30S ribosomal protein S4 [Psychroflexus torquis ATCC 700755] gi|91185046|gb|EAS71425.1| 30S ribosomal protein S4 [Psychroflexus torquis ATCC 700755] Length = 201 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE+++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGESIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAVQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR++F +A+RS G T L+ ESRLD + YR PT ARQ V+H+ Sbjct: 60 YTYG-ILEKQFRNMFSKANRSTGITGEILLQLCESRLDNVTYRLGIAPTRSGARQLVSHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ VNI SY+ K DV+ +++KSK L V E+ + V E+++ N + M TF Sbjct: 119 HITVNGQLVNIPSYQIKPNDVVSIREKSKSLNVVQESLS-NNKSVNEWMTWNSEKMQGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V++P + P + +VE YS+ Sbjct: 178 VKVPERSQ---IPEKINEQFIVELYSK 201 >gi|16803636|ref|NP_465121.1| 30S ribosomal protein S4 [Listeria monocytogenes EGD-e] gi|26399430|sp|Q8Y6T6|RS4_LISMO RecName: Full=30S ribosomal protein S4 gi|16411025|emb|CAC99674.1| ribosomal protein S4 [Listeria monocytogenes EGD-e] Length = 200 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQ KQK++ Sbjct: 1 MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ F +A + RG N + LE RLD IVYR T AARQ VNH H Sbjct: 60 MYG-LTERQFKNTFNKAGKLRGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY+ G VI V++KS + +++ E+ +++ VPEY++ + + + + Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAEKLTGSLN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200 >gi|304310039|ref|YP_003809637.1| 30S ribosomal protein S4 [gamma proteobacterium HdN1] gi|301795772|emb|CBL43971.1| 30S ribosomal protein S4 [gamma proteobacterium HdN1] Length = 206 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + PG HG+ R+ + S +G QLR KQ Sbjct: 1 MARYLGPKCKLSRREGVDLGLKSGVRAHESKCRSEKAPGQHGE-RRGRLSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I EK+FR + EA R +G T NL+ LESRLD +V+R F T ARQ V Sbjct: 60 KVRRIYG-ILEKQFRGYYAEASRRKGSTGENLLQLLESRLDNVVFRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +L+NG++VNI SY+ GDV+ V++KSK + A +LAE R +I V+ Sbjct: 119 SHKAILINGKTVNIPSYQLAAGDVVSVREKSKSQLRIGAAQELAEQRGFAAWIEVDTKKR 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + P + NL+VE YS+ Sbjct: 179 EGVFKSVPER---IDLPSDINENLIVELYSK 206 >gi|120597013|ref|YP_961587.1| 30S ribosomal protein S4 [Shewanella sp. W3-18-1] gi|146294817|ref|YP_001185241.1| 30S ribosomal protein S4 [Shewanella putrefaciens CN-32] gi|152112262|sp|A1RED8|RS4_SHESW RecName: Full=30S ribosomal protein S4 gi|172046874|sp|A4YBV9|RS4_SHEPC RecName: Full=30S ribosomal protein S4 gi|110812360|gb|ABG91716.1| ribosomal protein S4 [Shewanella putrefaciens 200] gi|120557106|gb|ABM23033.1| SSU ribosomal protein S4P [Shewanella sp. W3-18-1] gi|145566507|gb|ABP77442.1| SSU ribosomal protein S4P [Shewanella putrefaciens CN-32] gi|319424604|gb|ADV52678.1| ribosomal protein S4 [Shewanella putrefaciens 200] Length = 206 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL+ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ V+VNGR VNI S++ DV+ +++KS+ A + A + A+R+ P ++ V+ M Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDSAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRVPERSD---LSAEINEQLIVELYSK 206 >gi|260435631|ref|ZP_05789601.1| ribosomal protein S4 [Synechococcus sp. WH 8109] gi|260413505|gb|EEX06801.1| ribosomal protein S4 [Synechococcus sp. WH 8109] Length = 241 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 40 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 96 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 97 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 155 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++++ + +VP ++ ++ + A Sbjct: 156 VTVNGRVTDIASYQCKPGDVIAIRERKCSKKLAEANLEFPGLANVPSHLELDKSKLSAKV 215 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 216 TA---RCEREWVALEINELLVVEYYSR 239 >gi|163752892|ref|ZP_02160016.1| 30S ribosomal protein S4 [Kordia algicida OT-1] gi|161326624|gb|EDP97949.1| 30S ribosomal protein S4 [Kordia algicida OT-1] Length = 201 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR++F A+RS+G T L+ ESRLD +V+R PT ARQ V+HR Sbjct: 60 YTYG-ILERQFRNLFDRANRSKGITGEVLLQLCESRLDNVVFRMGISPTRSGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDV+ V++KSK L + + A V E+I+ N + T+ Sbjct: 119 HITVNGEQVNIPSYTLKAGDVVGVREKSKSLEVIERSLANASH-VYEWITWNGEKKEGTY 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V IP L+ P ++ L+VE YS+ Sbjct: 178 VSIPERLQ---IPENIKEQLIVELYSK 201 >gi|221310909|ref|ZP_03592756.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str. 168] Length = 200 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPSWKLSRRLGISLSVTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + L+SRLD +VY+ T ARQ VNH H Sbjct: 60 MYG-VNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G V+I SY K G I V++KS+ L+ + E+ ++ VPEY++ + + + TF Sbjct: 119 ILVDGSRVDIPSYLVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VEFYSR Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200 >gi|115350347|ref|YP_772186.1| 30S ribosomal protein S4 [Burkholderia ambifaria AMMD] gi|115280335|gb|ABI85852.1| SSU ribosomal protein S4P [Burkholderia ambifaria AMMD] Length = 213 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 15/213 (7%) Query: 2 SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 ++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 8 ARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLRE 64 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E++FR F EADR +G+T NL+ LESRLD +VYR F T ARQ Sbjct: 65 KQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEARQ 123 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V+H+ + VNG N+ S + K GD++ +++K+K+ A ++EA LAE+ +P +++V+ Sbjct: 124 LVSHKSITVNGVVANVPSQQVKAGDIVAIREKAKKQARIVEALSLAEQGGMPSWVAVDAK 183 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 184 KFEGTFKQMPERAD---IAGDINESLIVELYSR 213 >gi|26399364|sp|P59132|RS4_SHIFL RecName: Full=30S ribosomal protein S4 Length = 206 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++V GR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVPGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206 >gi|289665160|ref|ZP_06486741.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669367|ref|ZP_06490442.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 208 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + + PG HG RK K S + QLR Sbjct: 1 MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGAARKGKLSDYATQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K+A +G+T L+ LE+RLD + YR F T AAR Sbjct: 58 EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGEILLQLLETRLDNVCYRMGFAVTRPAAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171 Q V+HR VLVNG+SVN+ SY+ K GD I + +K+++ V EA +AE+ P ++ V+ Sbjct: 117 QLVSHRGVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEALTVAEQHDMTPSWVEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P P + L+VE YS+ Sbjct: 177 SKKFSGVFKAVPDRAD---LPSDINEALIVELYSK 208 >gi|289209305|ref|YP_003461371.1| ribosomal protein S4 [Thioalkalivibrio sp. K90mix] gi|288944936|gb|ADC72635.1| ribosomal protein S4 [Thioalkalivibrio sp. K90mix] Length = 206 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + + + T+ PG HG+ R+++ S + +QLR KQ Sbjct: 1 MARYIGPKCKLSRREGVDLGLKSRARALETKCKLDKAPGQHGE-RRTRLSDYAVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A + +G T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KLRRIYGVL-EKQFRNYYKKAAQRKGSTGENLLKLLEGRLDNVVYRMGFGSTRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR VLVNG+ VNI +Y+ + DV+ +++K+++ + ++ LAE+ P ++ V+ Sbjct: 119 SHRAVLVNGQVVNIAAYQVQPSDVVSIREKARKQVRIQDSMTLAEQSGFPSWVEVDTSKF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF IP P + +LVVE YS+ Sbjct: 179 EGTFKAIPDRSD---LPADINESLVVELYSK 206 >gi|146281194|ref|YP_001171347.1| 30S ribosomal protein S4 [Pseudomonas stutzeri A1501] gi|172045574|sp|A4VHQ4|RS4_PSEU5 RecName: Full=30S ribosomal protein S4 gi|145569399|gb|ABP78505.1| ribosomal protein S4 [Pseudomonas stutzeri A1501] Length = 206 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGARALESKCNIETPPGVHGQ-RRGRLSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +KEA +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKEAASRKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ K GDV+ V++K + + +A +L A+R E++ V+ D Sbjct: 119 SHKSITVNGQTVNIPSYQVKAGDVVAVREKCRNQLRIAQALELCAQRGRVEWVEVDADKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + NL+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206 >gi|121609261|ref|YP_997068.1| 30S ribosomal protein S4 [Verminephrobacter eiseniae EF01-2] gi|152112272|sp|A1WK93|RS4_VEREI RecName: Full=30S ribosomal protein S4 gi|121553901|gb|ABM58050.1| SSU ribosomal protein S4P [Verminephrobacter eiseniae EF01-2] Length = 207 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + KS +++ PG HG+ ++ S +GLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIADKSKFDSK---PGQHGRTSGARTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+ A+ +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFEAAESRKGNTGANLLFLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+SVNI SY K GD++ V++KSK+ + EA QLA + +P ++ VN Sbjct: 117 QLVSHKAITVNGQSVNIPSYLVKTGDLVAVREKSKKQGRIAEALQLATQVGMPAWVEVNT 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F + P + + + +L+VE YSR Sbjct: 177 EKAEGLFKKAPDRDE---FGADINESLIVELYSR 207 >gi|226939211|ref|YP_002794282.1| 30S ribosomal protein S4 [Laribacter hongkongensis HLHK9] gi|254764593|sp|C1DAU2|RS4_LARHH RecName: Full=30S ribosomal protein S4 gi|226714135|gb|ACO73273.1| RpsD [Laribacter hongkongensis HLHK9] Length = 206 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 125/214 (58%), Gaps = 16/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K +++R PG HG ++ + S +G+ LR Sbjct: 1 MARYTGPKCKLARREGTDLFLKSARRSIDSKCKLDSR---PGQHGA-KQPRLSDYGIHLR 56 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+++ YG + E++FR F EA+R +G T NL+ LESRLD +VYR + T +R Sbjct: 57 EKQKIRRIYGVL-ERQFRKYFAEAERRKGSTGENLLQILESRLDNVVYRMGYGSTRAESR 115 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ ++VNG VNI SY+ K GDV+ V++KSK+ + E+ LAE+ P ++SV+ Sbjct: 116 QLVSHKAIVVNGEVVNIPSYQVKAGDVVSVREKSKKQVRIAESLALAEQIGFPGWVSVDP 175 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF P + + LVVEFYS+ Sbjct: 176 KKMEGTFKNAPERSE---LSSDINEQLVVEFYSK 206 >gi|149926591|ref|ZP_01914851.1| 30S ribosomal protein S4 [Limnobacter sp. MED105] gi|149824520|gb|EDM83736.1| 30S ribosomal protein S4 [Limnobacter sp. MED105] Length = 207 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + + ++++ PG HG+ ++ S +G QLR KQ Sbjct: 1 MARYTGPKCKLSRREGTDLSLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGQQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA R +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 61 KVKRMYGVL-EKQFRRYFAEASRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ +LVNG++VNI SY K DVI +++KSK A ++E+ LAE+ P +++V+ + Sbjct: 120 SHKAILVNGKAVNIPSYSVKLNDVISIREKSKTQARIVESVTLAEQMGFPLWVNVDAKKL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +F +P + +L+VE YSR Sbjct: 180 EGSFKSVPERAD---LSQEINESLIVELYSR 207 >gi|258420636|ref|ZP_05683575.1| SSU ribosomal protein S4 [Staphylococcus aureus A9719] gi|257843240|gb|EEV67650.1| SSU ribosomal protein S4 [Staphylococcus aureus A9719] Length = 200 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K G I V++KS++L ++E+ ++ VPEY++ + D++ TFV Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + P + L+VE+YSR Sbjct: 178 CLPERSE---LPAEINEQLIVEYYSR 200 >gi|59710868|ref|YP_203644.1| 30S ribosomal protein S4 [Vibrio fischeri ES114] gi|197334188|ref|YP_002155020.1| ribosomal protein S4 [Vibrio fischeri MJ11] gi|75507103|sp|Q5E890|RS4_VIBF1 RecName: Full=30S ribosomal protein S4 gi|226695098|sp|B5FGE0|RS4_VIBFM RecName: Full=30S ribosomal protein S4 gi|59478969|gb|AAW84756.1| 30S ribosomal subunit protein S4 [Vibrio fischeri ES114] gi|197315678|gb|ACH65125.1| ribosomal protein S4 [Vibrio fischeri MJ11] Length = 206 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKDAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+KQ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKSILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206 >gi|223043626|ref|ZP_03613671.1| ribosomal protein S4 [Staphylococcus capitis SK14] gi|222443114|gb|EEE49214.1| ribosomal protein S4 [Staphylococcus capitis SK14] Length = 200 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F+ A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFEIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + D++ TFV Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLNIIKESVEI-NNFVPEYLDFDADSLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|46907827|ref|YP_014216.1| 30S ribosomal protein S4 [Listeria monocytogenes str. 4b F2365] gi|61215605|sp|Q71Z71|RS4_LISMF RecName: Full=30S ribosomal protein S4 gi|46881096|gb|AAT04393.1| ribosomal protein S4 [Listeria monocytogenes serotype 4b str. F2365] Length = 200 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQ KQK++ Sbjct: 1 MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ F +A + +G N + LE RLD IVYR T AARQ VNH H Sbjct: 60 MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY+ G VI V++KS + +++ E+ +++ VPEY++ + + + + Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAETLTGSLN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 178 RLPERSER---AAEINEAFIVEFYSR 200 >gi|298370567|ref|ZP_06981882.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314] gi|298281177|gb|EFI22667.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314] Length = 206 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EA R +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEAARRKGSTGELLLQLLESRLDNVVYRLGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + VNG+ VNI SY+ K GD+I V++K+K+ + EA LA + +P ++SV+ + + Sbjct: 119 SHKAITVNGQVVNIPSYQVKAGDIIAVREKAKKQVRIQEALNLATQIGLPSWVSVDTNKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LSSDINEQLVVEFYSK 206 >gi|224476810|ref|YP_002634416.1| 30S ribosomal protein S4 [Staphylococcus carnosus subsp. carnosus TM300] gi|254764610|sp|B9DN91|RS4_STACT RecName: Full=30S ribosomal protein S4 gi|222421417|emb|CAL28231.1| 30S ribosomal protein S4 [Staphylococcus carnosus subsp. carnosus TM300] Length = 201 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 6/205 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S + +QLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYAIQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E++F + F EA + G N + L RLD +VY T ARQ V H H Sbjct: 60 LYG-ITERQFHNTFIEAGKQSGVHGENFMRLLARRLDAVVYALGLARTRRQARQLVGHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G V+ V++KS++L + E+ ++ VPEY+ + + + TFV Sbjct: 119 IEVDGKRVNIPSYTLKPGQVVSVREKSQKLDIIQESVEI-NNFVPEYLDFDEEKLSGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 R+P + P + L+VE+YS Sbjct: 178 RVPERSE---LPAEINEQLIVEYYS 199 >gi|296313389|ref|ZP_06863330.1| ribosomal protein S4 [Neisseria polysaccharea ATCC 43768] gi|296840099|gb|EFH24037.1| ribosomal protein S4 [Neisseria polysaccharea ATCC 43768] Length = 206 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P ++SV+ D + Sbjct: 119 SHKAIAVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206 >gi|314933871|ref|ZP_07841236.1| ribosomal protein S4 [Staphylococcus caprae C87] gi|313654021|gb|EFS17778.1| ribosomal protein S4 [Staphylococcus caprae C87] Length = 200 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F+ A + G N + L SRLD +V+ T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFEIAGKQYGVHGENFMILLASRLDAVVFSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + D++ TFV Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLNIIKESVEI-NNFVPEYLDFDADSLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|221142354|ref|ZP_03566847.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751546|gb|ADL65723.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 200 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHSH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K G I V++KS++L ++E+ ++ VPEY++ + D++ TFV Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200 >gi|218899810|ref|YP_002448221.1| ribosomal protein S4 [Bacillus cereus G9842] gi|228903174|ref|ZP_04067308.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 4222] gi|228967755|ref|ZP_04128771.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar sotto str. T04001] gi|229163648|ref|ZP_04291596.1| 30S ribosomal protein S4 [Bacillus cereus R309803] gi|226697801|sp|B7IKS0|RS4_BACC2 RecName: Full=30S ribosomal protein S4 gi|218544223|gb|ACK96617.1| ribosomal protein S4 [Bacillus cereus G9842] gi|228619785|gb|EEK76663.1| 30S ribosomal protein S4 [Bacillus cereus R309803] gi|228791909|gb|EEM39495.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar sotto str. T04001] gi|228856456|gb|EEN00982.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 4222] Length = 200 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPNQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + P + L+VEFYSR Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200 >gi|325272032|ref|ZP_08138475.1| 30S ribosomal protein S4 [Pseudomonas sp. TJI-51] gi|324102836|gb|EGC00240.1| 30S ribosomal protein S4 [Pseudomonas sp. TJI-51] Length = 206 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++ A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ + GDV+ V++KS +++A +L A+R E++ V+ Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSLSQLRIVQALELCAQRGRVEWVDVDAAKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + NL+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206 >gi|332042696|gb|EGI78896.1| ribosomal protein S4 [Lacinutrix algicola 5H-3-7-4] Length = 201 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G K R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDK-AFEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR++FK A + G T L+ ESRLD +V+R PT AARQ V+HR Sbjct: 60 YTYG-ILEKQFRNMFKRATAAPGITGEVLLQLCESRLDNVVFRMGIAPTRSAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VN+ SY+ K GDV+ V++KSK L ++ + + +V E+I+ N + T+ Sbjct: 119 HITVNGELVNVPSYQLKAGDVVAVREKSKSLEAIERSLSNSS-NVFEWITWNTETKQGTY 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P+ + P + +VE YS+ Sbjct: 178 VSVPAR---IQIPENINEQFIVELYSK 201 >gi|242374009|ref|ZP_04819583.1| 30S ribosomal protein S4 [Staphylococcus epidermidis M23864:W1] gi|242348260|gb|EES39862.1| 30S ribosomal protein S4 [Staphylococcus epidermidis M23864:W1] Length = 200 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SY K G VI V++KS+ L + E+ ++ VPEY+ + D++ TFV Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLNIIKESVEI-NNYVPEYLDFDADSLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|325294423|ref|YP_004280937.1| ribosomal protein S4 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064871|gb|ADY72878.1| ribosomal protein S4 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 208 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 128/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLW------GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + K +I RR+G N++ + KS ++ R Y PG HG+ R+ K SY+G QL Sbjct: 1 MGRYTGPKWRIARRLGVNIYVGEEKSQKGKSILDRRPYPPGQHGRSRR-KISYYGRQLME 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K YYG I E +F+ ++ A+R RG T NL+ LESRLD +VYR F + ARQ Sbjct: 60 KQKVKYYYG-IREGQFKRFYEMAERMRGQTGENLLKLLESRLDNVVYRLGFGKSHRHARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+LVNG+ V+ SY K GD++EVK+KS+++ + E +LA+ R +P ++ ++ + Sbjct: 119 LVVHGHILVNGKKVDRPSYLVKPGDIVEVKEKSREIPQIKEGIELAQRRGIPSWLELDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N P+ + + ++ +L+VE YS+ Sbjct: 179 NFKGVVKAEPTREE---IEIPVEEHLIVELYSK 208 >gi|302344330|ref|YP_003808859.1| ribosomal protein S4 [Desulfarculus baarsii DSM 2075] gi|301640943|gb|ADK86265.1| ribosomal protein S4 [Desulfarculus baarsii DSM 2075] Length = 209 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR + L+ + K V R+Y PG HGQ R+ K S +G+QLR Sbjct: 1 MARYRGSVCRLCRREMQKLYLKGDRCYGDKCAVERRTYPPGQHGQGRRGKASDYGIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG ++E +FR +K A G T HNL+ LE RLD +V+R F + ARQ Sbjct: 61 KQKVKRMYG-LAENQFRLTYKRASSMHGVTGHNLLQLLERRLDNVVFRLGFANSRTQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 +V H H VNG VNI S K GDV+ V Q S++L + EA + A R +P ++ ++ Sbjct: 120 WVRHSHFTVNGHKVNIPSALVKAGDVVAVVQTSRELGQLKEAMEAVARRTIPGWLELDVK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ T +P+ + + MQ L+VE YSR Sbjct: 180 DLSGTVKALPTREE---LTMPMQEQLIVELYSR 209 >gi|313887042|ref|ZP_07820741.1| ribosomal protein S4 [Porphyromonas asaccharolytica PR426713P-I] gi|312923453|gb|EFR34263.1| ribosomal protein S4 [Porphyromonas asaccharolytica PR426713P-I] gi|332176607|gb|AEE12297.1| ribosomal protein S4 [Porphyromonas asaccharolytica DSM 20707] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE ++G K ++ +SY PG HG R+ K S + LQLR KQ K Sbjct: 1 MARYIGPKSKIARKFGEPIFGADK-VLSKKSYPPGQHGNSRRRKQSEYALQLREKQMAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A RS G T L+ LESRLD +V+R PT AARQ V+HRH Sbjct: 60 TYGVL-ERQFRNLFEKAQRSSGITGEVLLQLLESRLDNVVFRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SY K G +I V+++ K + + ++ ++ + + Sbjct: 119 IVVDGEVVNIPSYTLKPGQIIGVRERDKSMEVIADSLAGYNHSKYPWLEWDGRTYSGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + P ++ L+VE YS+ Sbjct: 179 NVPTREE---IPEPIKEQLIVELYSK 201 >gi|285017343|ref|YP_003375054.1| 30s ribosomal protein s4 [Xanthomonas albilineans GPE PC73] gi|283472561|emb|CBA15066.1| probable 30s ribosomal protein s4 [Xanthomonas albilineans] Length = 209 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 17/216 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQR-RKSKPSYFGLQL 52 M++ K+ RR G +L + K + + PG HG RK K S + QL Sbjct: 1 MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGATARKGKLSDYATQL 57 Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 R KQK+K+ Y + E++FR+ +K+A +G+T NL+ LE+RLD +VYR F T AA Sbjct: 58 REKQKVKRIYC-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPAA 116 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISV 170 RQ V+HR VLVNG+SVN+ SY+ K GD I + +K+++ V EA +A+ P ++ V Sbjct: 117 RQLVSHRGVLVNGKSVNLASYQVKAGDAIALSEKAQKQLRVQEALSVADTHDLTPSWVEV 176 Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +P P + L+VE YS+ Sbjct: 177 DSKKFSGIFKAVPDRAD---LPADINEALIVELYSK 209 >gi|325203287|gb|ADY98740.1| ribosomal protein S4 [Neisseria meningitidis M01-240355] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K++ S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKTRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P ++SV+ D + Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206 >gi|86148804|ref|ZP_01067071.1| 30S ribosomal protein S4 [Vibrio sp. MED222] gi|148982227|ref|ZP_01816653.1| 30S ribosomal protein S4 [Vibrionales bacterium SWAT-3] gi|218710725|ref|YP_002418346.1| 30S ribosomal protein S4 [Vibrio splendidus LGP32] gi|254764622|sp|B7VLD3|RS4_VIBSL RecName: Full=30S ribosomal protein S4 gi|85833394|gb|EAQ51585.1| 30S ribosomal protein S4 [Vibrio sp. MED222] gi|145960589|gb|EDK25942.1| 30S ribosomal protein S4 [Vibrionales bacterium SWAT-3] gi|218323744|emb|CAV20098.1| ribosomal protein S4 [Vibrio splendidus LGP32] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+KQ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKSILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRMPERSD---LSADINEHLIVELYSK 206 >gi|150003363|ref|YP_001298107.1| 30S ribosomal protein S4 [Bacteroides vulgatus ATCC 8482] gi|212695280|ref|ZP_03303408.1| hypothetical protein BACDOR_04820 [Bacteroides dorei DSM 17855] gi|237711700|ref|ZP_04542181.1| 30S ribosomal protein S4 [Bacteroides sp. 9_1_42FAA] gi|237725859|ref|ZP_04556340.1| 30S ribosomal protein S4 [Bacteroides sp. D4] gi|265753119|ref|ZP_06088688.1| 30S ribosomal protein S4 [Bacteroides sp. 3_1_33FAA] gi|294777845|ref|ZP_06743289.1| ribosomal protein S4 [Bacteroides vulgatus PC510] gi|172048640|sp|A6KYH1|RS4_BACV8 RecName: Full=30S ribosomal protein S4 gi|149931787|gb|ABR38485.1| 30S ribosomal protein S4 [Bacteroides vulgatus ATCC 8482] gi|212662190|gb|EEB22764.1| hypothetical protein BACDOR_04820 [Bacteroides dorei DSM 17855] gi|229435667|gb|EEO45744.1| 30S ribosomal protein S4 [Bacteroides dorei 5_1_36/D4] gi|229454395|gb|EEO60116.1| 30S ribosomal protein S4 [Bacteroides sp. 9_1_42FAA] gi|263236305|gb|EEZ21800.1| 30S ribosomal protein S4 [Bacteroides sp. 3_1_33FAA] gi|294448299|gb|EFG16855.1| ribosomal protein S4 [Bacteroides vulgatus PC510] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A + G T L+ LE+RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAASANGITGEILLQSLEARLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI S+ K G ++ V+++SK L + + ++ + + V + Sbjct: 119 ITVDGKVVNIPSFSVKPGQIVGVRERSKSLEVIANSLAGFNHSKYPWLEWDESSKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|50086191|ref|YP_047701.1| 30S ribosomal protein S4 [Acinetobacter sp. ADP1] gi|61215531|sp|Q6F7T6|RS4_ACIAD RecName: Full=30S ribosomal protein S4 gi|49532167|emb|CAG69879.1| 30S ribosomal protein S4 [Acinetobacter sp. ADP1] Length = 207 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + PG HGQ R + Y LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHAKAPGQHGQARGKQSEY-SLQLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 60 QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 118 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +L A+R +P ++ V+H Sbjct: 119 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMDVDHSK 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 179 LEGTFKAAPDRSD---LPAEINESLIVELYSK 207 >gi|89093591|ref|ZP_01166539.1| 30S ribosomal protein S4 [Oceanospirillum sp. MED92] gi|89082281|gb|EAR61505.1| 30S ribosomal protein S4 [Oceanospirillum sp. MED92] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG+HG R+ + S +GLQLR KQ Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGVRALDSKCKAETVPGVHGA-RRGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FRS +KEA R G T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-ERQFRSYYKEAARRSGATGENLLQLLEGRLDNVVYRMGFGSTRAEARQIV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +HR + VNG+ VNI SY+ K GDV+ V++K+K + A +LA +R E++ V+ M Sbjct: 119 SHRSITVNGQVVNIASYQVKAGDVVAVREKAKTQLRIKNALELAGQRAAVEWVEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ P + L+VE YS+ Sbjct: 179 EGTYKATPERSD---LSADINEQLIVELYSK 206 >gi|189460709|ref|ZP_03009494.1| hypothetical protein BACCOP_01356 [Bacteroides coprocola DSM 17136] gi|189432668|gb|EDV01653.1| hypothetical protein BACCOP_01356 [Bacteroides coprocola DSM 17136] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNTRRRKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNMFEKAASMNGITGEILLQSLECRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G ++ V++KSK L V + ++ + ++ + Sbjct: 119 ITVDGQVVNIPSYSVKPGQLVGVREKSKSLEVVANSLAGFNHSKYPWLEWDENSKTGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ +L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEHLIVELYSK 201 >gi|187930339|ref|YP_001900826.1| 30S ribosomal protein S4 [Ralstonia pickettii 12J] gi|226699109|sp|B2UEJ4|RS4_RALPJ RecName: Full=30S ribosomal protein S4 gi|187727229|gb|ACD28394.1| ribosomal protein S4 [Ralstonia pickettii 12J] Length = 207 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ +LVNG+++N+ S + K GDVI +++KSK+ + E+ LAE+ P +++V+ Sbjct: 117 QLVSHKAILVNGQALNVPSAQVKSGDVIAIREKSKKQVRIAESLTLAEQSGFPIWVAVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF + P + +L+VE YSR Sbjct: 177 KKMEGTFKQAPDRAD---IAGDINESLIVELYSR 207 >gi|254495366|ref|ZP_05108290.1| 30S ribosomal protein S4 [Polaribacter sp. MED152] gi|85819720|gb|EAQ40877.1| 30S ribosomal protein S4 [Polaribacter sp. MED152] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 125/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G K+ R++ PG HG RR+ K S + QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGEDKN-FEKRNFPPGQHGNARRRGKKSEYATQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++F ++FK+A S+G T L+ ESRLD +VYR + ARQ V+HR Sbjct: 60 YTYG-ILERQFSNLFKKASASQGITGEILLQLCESRLDNVVYRMGVSNSRSGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY KEGDV+ V++KSK L ++ +A + +V E+++ N+D TF Sbjct: 119 HITVNGEIVNIPSYSLKEGDVVAVREKSKSLVAIEDALA-SNNNVFEWLTWNNDTKSGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V++P L+ P ++ L+VE YS+ Sbjct: 178 VKVPERLQ---IPENIKEQLIVELYSK 201 >gi|88799195|ref|ZP_01114775.1| ribosomal protein S4 [Reinekea sp. MED297] gi|88778178|gb|EAR09373.1| ribosomal protein S4 [Reinekea sp. MED297] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG+HG R+ + S +G+QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALDSKCKLETVPGVHGA-RRGRLSDYGIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R++G T L+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRTYGVL-EKQFRNYYKEAARTKGATGEVLLQLLERRLDNVVYRMGFGVTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 +H+ +LVNG+SVNI S++ K GDV+ V++KS + A +A P ++ V+ + Sbjct: 119 SHKAILVNGQSVNIPSFQVKPGDVVSVREKSANQLRIKSAVDVAATRAPVSWVEVDAKKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + NL+VE YS+ Sbjct: 179 EGKFSAVPERSD---LSQDINENLIVELYSK 206 >gi|15676094|ref|NP_273225.1| 30S ribosomal protein S4 [Neisseria meningitidis MC58] gi|59802136|ref|YP_208848.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA 1090] gi|121634041|ref|YP_974286.1| 30S ribosomal protein S4 [Neisseria meningitidis FAM18] gi|161870895|ref|YP_001600070.1| 30S ribosomal protein S4 [Neisseria meningitidis 053442] gi|218767143|ref|YP_002341655.1| 30S ribosomal protein S4 [Neisseria meningitidis Z2491] gi|239997950|ref|ZP_04717874.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 35/02] gi|240015072|ref|ZP_04721985.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI18] gi|240017521|ref|ZP_04724061.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA6140] gi|240081664|ref|ZP_04726207.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA19] gi|240113942|ref|ZP_04728432.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae MS11] gi|240116676|ref|ZP_04730738.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID18] gi|240118898|ref|ZP_04732960.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID1] gi|240122144|ref|ZP_04735106.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID24-1] gi|240124436|ref|ZP_04737392.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID332] gi|240124695|ref|ZP_04737581.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-92-679] gi|240129112|ref|ZP_04741773.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-93-1035] gi|254494697|ref|ZP_05107868.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 1291] gi|254805789|ref|YP_003084010.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha14] gi|260439565|ref|ZP_05793381.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI2] gi|268593800|ref|ZP_06127967.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 35/02] gi|268597761|ref|ZP_06131928.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA19] gi|268600006|ref|ZP_06134173.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae MS11] gi|268602343|ref|ZP_06136510.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID18] gi|268604607|ref|ZP_06138774.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID1] gi|268683064|ref|ZP_06149926.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID332] gi|268683269|ref|ZP_06150131.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-92-679] gi|268687494|ref|ZP_06154356.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-93-1035] gi|291042801|ref|ZP_06568542.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI2] gi|293398178|ref|ZP_06642383.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae F62] gi|304388967|ref|ZP_07371014.1| 30S ribosomal protein S4 [Neisseria meningitidis ATCC 13091] gi|54039509|sp|P66561|RS4_NEIMB RecName: Full=30S ribosomal protein S4 gi|54041962|sp|P66560|RS4_NEIMA RecName: Full=30S ribosomal protein S4 gi|75507306|sp|Q5F5V1|RS4_NEIG1 RecName: Full=30S ribosomal protein S4 gi|152112237|sp|A1KRJ8|RS4_NEIMF RecName: Full=30S ribosomal protein S4 gi|189045388|sp|A9M3U1|RS4_NEIM0 RecName: Full=30S ribosomal protein S4 gi|7225385|gb|AAF40624.1| 30S ribosomal protein S4 [Neisseria meningitidis MC58] gi|59719031|gb|AAW90436.1| putative 30S ribosomal protein S4 [Neisseria gonorrhoeae FA 1090] gi|120865747|emb|CAM09476.1| 30S ribosomal protein S4 [Neisseria meningitidis FAM18] gi|121051151|emb|CAM07422.1| 30S ribosomal protein S4 [Neisseria meningitidis Z2491] gi|161596448|gb|ABX74108.1| 30S ribosomal protein S4 [Neisseria meningitidis 053442] gi|226513737|gb|EEH63082.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 1291] gi|254669331|emb|CBA08372.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha14] gi|254670762|emb|CBA07036.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha153] gi|254672692|emb|CBA06587.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha275] gi|261391703|emb|CAX49152.1| 30S ribosomal protein S4 [Neisseria meningitidis 8013] gi|268547189|gb|EEZ42607.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 35/02] gi|268551549|gb|EEZ46568.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA19] gi|268584137|gb|EEZ48813.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae MS11] gi|268586474|gb|EEZ51150.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID18] gi|268588738|gb|EEZ53414.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID1] gi|268623348|gb|EEZ55748.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID332] gi|268623553|gb|EEZ55953.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-92-679] gi|268627778|gb|EEZ60178.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-93-1035] gi|291013235|gb|EFE05201.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI2] gi|291611441|gb|EFF40511.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae F62] gi|304337101|gb|EFM03288.1| 30S ribosomal protein S4 [Neisseria meningitidis ATCC 13091] gi|308388383|gb|ADO30703.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha710] gi|319411349|emb|CBY91760.1| 30S ribosomal protein S4 [Neisseria meningitidis WUE 2594] gi|325129086|gb|EGC51935.1| ribosomal protein S4 [Neisseria meningitidis N1568] gi|325131057|gb|EGC53781.1| ribosomal protein S4 [Neisseria meningitidis OX99.30304] gi|325133079|gb|EGC55751.1| ribosomal protein S4 [Neisseria meningitidis M6190] gi|325135173|gb|EGC57799.1| ribosomal protein S4 [Neisseria meningitidis M13399] gi|325137225|gb|EGC59820.1| ribosomal protein S4 [Neisseria meningitidis M0579] gi|325139057|gb|EGC61603.1| ribosomal protein S4 [Neisseria meningitidis ES14902] gi|325141180|gb|EGC63680.1| ribosomal protein S4 [Neisseria meningitidis CU385] gi|325143257|gb|EGC65596.1| ribosomal protein S4 [Neisseria meningitidis 961-5945] gi|325145364|gb|EGC67641.1| ribosomal protein S4 [Neisseria meningitidis M01-240013] gi|325197454|gb|ADY92910.1| ribosomal protein S4 [Neisseria meningitidis G2136] gi|325199380|gb|ADY94835.1| ribosomal protein S4 [Neisseria meningitidis H44/76] gi|325202998|gb|ADY98452.1| ribosomal protein S4 [Neisseria meningitidis M01-240149] gi|325205260|gb|ADZ00713.1| ribosomal protein S4 [Neisseria meningitidis M04-240196] gi|325207204|gb|ADZ02656.1| ribosomal protein S4 [Neisseria meningitidis NZ-05/33] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P ++SV+ D + Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206 >gi|303256474|ref|ZP_07342488.1| ribosomal protein S4 [Burkholderiales bacterium 1_1_47] gi|331000668|ref|ZP_08324321.1| ribosomal protein S4 [Parasutterella excrementihominis YIT 11859] gi|302859965|gb|EFL83042.1| ribosomal protein S4 [Burkholderiales bacterium 1_1_47] gi|329570880|gb|EGG52591.1| ribosomal protein S4 [Parasutterella excrementihominis YIT 11859] Length = 207 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + +++ PG HG+ ++ S +G QLR KQ Sbjct: 1 MARYTGPKEKLARREGCDLNLKSAVRSFDSKCKSESAPGQHGRTSGARLSDYGAQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + E++FR F +A R RG+T L+S LESRLD +VYR F T ARQ V Sbjct: 61 KVKRMYGVL-ERQFRLYFAKAARKRGNTGEQLLSLLESRLDNVVYRMGFGCTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175 +H + VNG VNI SY K GDVI V++K+K + E+ +LAE + +P+++SV+ + Sbjct: 120 SHCAISVNGNKVNIPSYSVKAGDVIAVREKAKNQVRIAESLKLAESNGLPDWVSVDTKKL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P+ + P + +L+VE YSR Sbjct: 180 EGTFKNVPARDEICP---DVNESLIVELYSR 207 >gi|291286338|ref|YP_003503154.1| 30S ribosomal protein S4 [Denitrovibrio acetiphilus DSM 12809] gi|290883498|gb|ADD67198.1| ribosomal protein S4 [Denitrovibrio acetiphilus DSM 12809] Length = 208 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K + Y PG HGQ RK K S FG QLR Sbjct: 1 MARYTGAVCKLCRREGMKLFLKGERCYKDKCGFEKKPYPPGQHGQGRK-KISDFGTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR F +A R G T NL+ LE RLD IVYRA F + ARQ Sbjct: 60 KQKVKRLYGVL-EKQFRRYFDKATRMDGITGENLLQLLERRLDNIVYRAGFAGSRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H L++G+ V+I S+ K G VIEV++KS+ ++ + AE R V +++++ Sbjct: 119 MVKHSHFLIDGKKVDIPSFLVKPGMVIEVREKSQNVSRFKDCLDTAEGRGVSDWLALEKS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N A R+P +Q +L+VE YS+ Sbjct: 179 NFKAVVNRLPERDD---IGYDIQEHLIVELYSK 208 >gi|229019885|ref|ZP_04176683.1| 30S ribosomal protein S4 [Bacillus cereus AH1273] gi|229026111|ref|ZP_04182488.1| 30S ribosomal protein S4 [Bacillus cereus AH1272] gi|229032307|ref|ZP_04188280.1| 30S ribosomal protein S4 [Bacillus cereus AH1271] gi|229175366|ref|ZP_04302881.1| 30S ribosomal protein S4 [Bacillus cereus MM3] gi|228608198|gb|EEK65505.1| 30S ribosomal protein S4 [Bacillus cereus MM3] gi|228729087|gb|EEL80090.1| 30S ribosomal protein S4 [Bacillus cereus AH1271] gi|228735189|gb|EEL85807.1| 30S ribosomal protein S4 [Bacillus cereus AH1272] gi|228741405|gb|EEL91607.1| 30S ribosomal protein S4 [Bacillus cereus AH1273] Length = 200 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 ITVDGSRVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + L+VEFYSR Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200 >gi|88803725|ref|ZP_01119249.1| 30S ribosomal protein S4 [Polaribacter irgensii 23-P] gi|88780458|gb|EAR11639.1| 30S ribosomal protein S4 [Polaribacter irgensii 23-P] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G K+ R+Y PG HG RR+ K S + QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGEDKN-FEKRNYPPGQHGNARRRGKKSEYATQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++F ++FK+A S+G T L+ ESRLD +VYR + ARQ V+HR Sbjct: 60 YTYG-ILERQFSNLFKKASASQGITGEILVQLCESRLDNVVYRMGVSTSRSGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VN+ SY EGDV+ V++KSK + ++ ++ + +V E+++ N D TF Sbjct: 119 HITVNGEIVNVPSYNLLEGDVVAVREKSKSIQAIEDSLA-SNSNVYEWLTWNSDKKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V++P+ L+ P ++ L+VE YS+ Sbjct: 178 VKVPARLQ---IPENIKEQLIVELYSK 201 >gi|209693947|ref|YP_002261875.1| 30S ribosomal protein S4 [Aliivibrio salmonicida LFI1238] gi|226697795|sp|B6EPU8|RS4_ALISL RecName: Full=30S ribosomal protein S4 gi|208007898|emb|CAQ78028.1| 30S ribosomal protein S4 [Aliivibrio salmonicida LFI1238] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKDAARIKGNTGENLLQLLEGRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG+ VN+ S++ DV+ +++K+K + + A ++AE R+ P +I V+ M Sbjct: 119 SHKSILVNGKVVNVPSFKVSANDVVSIREKAKLQSRIKAALEVAEQREKPTWIEVDAGKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206 >gi|170723882|ref|YP_001751570.1| 30S ribosomal protein S4 [Pseudomonas putida W619] gi|226699108|sp|B1JAI8|RS4_PSEPW RecName: Full=30S ribosomal protein S4 gi|169761885|gb|ACA75201.1| ribosomal protein S4 [Pseudomonas putida W619] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++ A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ + GDV+ V++KS +++A +L A+R E++ V+ Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSSNQLRIVQALELCAQRGRVEWVDVDSAKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + NL+VE YS+ Sbjct: 179 SGVFKNVPARGD---LSADINENLIVELYSK 206 >gi|91791563|ref|YP_561214.1| 30S ribosomal protein S4 [Shewanella denitrificans OS217] gi|123166579|sp|Q12ST5|RS4_SHEDO RecName: Full=30S ribosomal protein S4 gi|91713565|gb|ABE53491.1| SSU ribosomal protein S4P [Shewanella denitrificans OS217] Length = 206 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +G QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 +H+ VLVNGR VNI S++ DV+ +++KS+ A + + + A+R+ P ++ V++ M Sbjct: 119 SHKTVLVNGRVVNIPSFKVSANDVVSIREKSRTQARIKASLEVAAQREKPTWVEVDNTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206 >gi|220930992|ref|YP_002507900.1| ribosomal protein S4 [Halothermothrix orenii H 168] gi|254764592|sp|B8D0T6|RS4_HALOH RecName: Full=30S ribosomal protein S4 gi|219992302|gb|ACL68905.1| ribosomal protein S4 [Halothermothrix orenii H 168] Length = 208 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR GE L+ + K ++ RSY PG HG RR++KP+ +G+QLR Sbjct: 1 MARYKGPVCRLCRREGEKLYLKGQRCYTDKCAIDRRSYPPGEHG-RRRNKPTEYGMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG I EK+F+ F A++ G T N +S LE RLD +VYR + ARQ Sbjct: 60 KQKVKRIYG-ILEKQFKRYFDMAEKMPGVTGENFLSILERRLDNVVYRLGLATSRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 FV H H+LVNGR VNI SY EGDVI VK S++ E + E P+++SVN + Sbjct: 119 FVLHGHILVNGRKVNIPSYLVDEGDVISVKDSSRKSKRFKEVFEFNEDLTPPKWLSVNLE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P+ +D+ YPV + +L+VEFYSR Sbjct: 179 KAEGKVVAMPTR-EDIDYPV--EEHLIVEFYSR 208 >gi|84394604|ref|ZP_00993306.1| 30S ribosomal protein S4 [Vibrio splendidus 12B01] gi|84374778|gb|EAP91723.1| 30S ribosomal protein S4 [Vibrio splendidus 12B01] Length = 206 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ VLVNG+ VN+ S++ DV+ +++K+KQ + + A ++AE R+ P +I V+ M Sbjct: 119 SHKSVLVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDASKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P + +L+VE YS+ Sbjct: 179 EGTFKRMPERSD---LSADINEHLIVELYSK 206 >gi|229076157|ref|ZP_04209125.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-18] gi|229099115|ref|ZP_04230049.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-29] gi|229105283|ref|ZP_04235932.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-28] gi|229118145|ref|ZP_04247504.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-3] gi|228665368|gb|EEL20851.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-3] gi|228678209|gb|EEL32437.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-28] gi|228684343|gb|EEL38287.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-29] gi|228707020|gb|EEL59225.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-18] Length = 200 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + L+VEFYSR Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200 >gi|54778757|gb|AAV39591.1| ribosomal protein S4 [synthetic construct] Length = 233 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 126/210 (60%), Gaps = 10/210 (4%) Query: 2 SKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQK 57 ++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK Sbjct: 26 ARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQK 84 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+ Sbjct: 85 VRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVS 143 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMV 176 H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 144 HKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKME 203 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 204 GTFKRKPERSD---LSADINEHLIVELYSK 230 >gi|254881348|ref|ZP_05254058.1| 30S ribosomal protein S4 [Bacteroides sp. 4_3_47FAA] gi|319640349|ref|ZP_07995074.1| hypothetical protein HMPREF9011_00671 [Bacteroides sp. 3_1_40A] gi|254834141|gb|EET14450.1| 30S ribosomal protein S4 [Bacteroides sp. 4_3_47FAA] gi|317388124|gb|EFV68978.1| hypothetical protein HMPREF9011_00671 [Bacteroides sp. 3_1_40A] Length = 201 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A + G T L+ LE+RLD +V+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAASANGITGEILLQSLEARLDNVVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI S+ K G ++ V+++SK L + + ++ + + V + Sbjct: 119 ITVDGKVVNIPSFSVKPGQIVGVRERSKSLEVIANSLAGFNHSKYPWLEWDETSKVGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP P ++ +L+VE YS+ Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201 >gi|261400076|ref|ZP_05986201.1| ribosomal protein S4 [Neisseria lactamica ATCC 23970] gi|313667465|ref|YP_004047749.1| 30S ribosomal protein S4 [Neisseria lactamica ST-640] gi|269210301|gb|EEZ76756.1| ribosomal protein S4 [Neisseria lactamica ATCC 23970] gi|309379135|emb|CBX22266.1| 30S ribosomal protein S4 [Neisseria lactamica Y92-1009] gi|313004927|emb|CBN86353.1| 30S ribosomal protein S4 [Neisseria lactamica 020-06] Length = 206 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKLDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ + VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P +++V+ D + Sbjct: 119 SHKAIAVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALGLAIQIGLPSWVAVDADKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206 >gi|257425833|ref|ZP_05602257.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus 55/2053] gi|257428499|ref|ZP_05604897.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 65-1322] gi|257431133|ref|ZP_05607510.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 68-397] gi|257433815|ref|ZP_05610173.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus E1410] gi|257436732|ref|ZP_05612776.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus M876] gi|282911345|ref|ZP_06319147.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus WBG10049] gi|282914514|ref|ZP_06322300.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M899] gi|282924860|ref|ZP_06332526.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C101] gi|293503592|ref|ZP_06667439.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 58-424] gi|293510608|ref|ZP_06669313.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus M809] gi|293537149|ref|ZP_06671829.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M1015] gi|257271527|gb|EEV03673.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus 55/2053] gi|257275340|gb|EEV06827.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 65-1322] gi|257278081|gb|EEV08729.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 68-397] gi|257281908|gb|EEV12045.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus E1410] gi|257284083|gb|EEV14206.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus M876] gi|282313226|gb|EFB43622.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C101] gi|282321695|gb|EFB52020.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M899] gi|282325040|gb|EFB55350.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus WBG10049] gi|290919994|gb|EFD97062.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M1015] gi|291095258|gb|EFE25523.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 58-424] gi|291466499|gb|EFF09020.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus M809] gi|312437824|gb|ADQ76895.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus TCH60] Length = 200 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K I V++KS++L ++E+ ++ VPEY++ + D++ TFV Sbjct: 119 ILVDGKRVDIPSYSVKPSQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200 >gi|239637962|ref|ZP_04678923.1| ribosomal protein S4 [Staphylococcus warneri L37603] gi|239596525|gb|EEQ79061.1| ribosomal protein S4 [Staphylococcus warneri L37603] Length = 200 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAAKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+GR V+I SY K G + V++KS++L + E+ ++ VPEY++ + D++ TFV Sbjct: 119 IEVDGRRVDIPSYSLKPGQEVAVREKSQKLNIITESVEI-NNFVPEYLNFDADSLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|217967395|ref|YP_002352901.1| ribosomal protein S4 [Dictyoglomus turgidum DSM 6724] gi|226732179|sp|B8E1F9|RS4_DICTD RecName: Full=30S ribosomal protein S4 gi|217336494|gb|ACK42287.1| ribosomal protein S4 [Dictyoglomus turgidum DSM 6724] Length = 206 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 14/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K P R + PG HG+ ++ Y GL+LR Sbjct: 1 MARYTGPDCRLCRREGMKLFLKGTKCFSEKCPFERRPFPPGQHGRAQRKLTEY-GLRLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ+ K+ YG + E++FR F+ A + RG T L+ LE+RLD +VYR + + ARQ Sbjct: 60 KQRAKRIYGVL-ERQFRRYFEIASKGRGVTGERLLQLLETRLDNVVYRLGWALSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H + VNG+ VNI SY K GDV+E+ K L V EA + VP ++ ++ + Sbjct: 119 IVSHGKIAVNGKRVNIPSYNLKPGDVVELLD--KDLIPVQEAISVFGNKSVPAWLELDRE 176 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ +R+P + +Q L+VEFYSR Sbjct: 177 NLRGKVLRLPKREE---IDTPVQEQLIVEFYSR 206 >gi|330684381|gb|EGG96107.1| ribosomal protein S4 [Staphylococcus epidermidis VCU121] Length = 200 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAAKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+GR V+I SY K G I V++KS++L + E+ ++ VPEY++ + D++ TFV Sbjct: 119 IEVDGRRVDIPSYSLKPGQEIAVREKSQKLNIITESVEI-NNFVPEYLNFDADSLKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200 >gi|313206370|ref|YP_004045547.1| SSU ribosomal protein s4p [Riemerella anatipestifer DSM 15868] gi|312445686|gb|ADQ82041.1| SSU ribosomal protein S4P [Riemerella anatipestifer DSM 15868] gi|315023689|gb|EFT36693.1| 30S ribosomal protein S4 [Riemerella anatipestifer RA-YM] gi|325336184|gb|ADZ12458.1| Ribosomal protein S4 related protein [Riemerella anatipestifer RA-GD] Length = 202 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 82/208 (39%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQKM 58 M++ K KI R+ G ++G K+ R+ PG HG RR +K S + +QL KQK Sbjct: 1 MARYIGPKTKIARKFGAAIYGDDKNFEKRRNQPPGQHGPNKRRGAKKSEYAVQLAEKQKA 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I E++F ++FK+A S+G T L+ ESRLD +VYR F T AARQ V+H Sbjct: 61 KYTYG-ILERQFSNLFKKAHASKGVTGEVLLQLCESRLDNVVYRLGFAKTRAAARQLVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 RH+ VNG VNI SY K GD + V+QKSK L + A +++ N + T Sbjct: 120 RHITVNGEVVNIPSYSLKPGDKVAVRQKSKSLEVIETALSAKAN--YDWLQFNDETKEGT 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FV +P + P ++ L+VE YS+ Sbjct: 178 FVGVPER---IQIPEDIKEQLIVELYSK 202 >gi|92112578|ref|YP_572506.1| SSU ribosomal protein S4P [Chromohalobacter salexigens DSM 3043] gi|122420778|sp|Q1R0F1|RS4_CHRSD RecName: Full=30S ribosomal protein S4 gi|91795668|gb|ABE57807.1| SSU ribosomal protein S4P [Chromohalobacter salexigens DSM 3043] Length = 206 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + +P + PG+HGQ R+ + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVTPFEKKCKSEQIPGVHGQ-RRQRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGATGELLLQLLESRLDNVVYRMGFGSTRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNGR+VN+ SY+ K GDV+ V++K+K A + A + A R +I V+ M Sbjct: 119 SHKAIAVNGRTVNVASYQVKPGDVVSVREKAKNQARIQNALGIAANRGDVAWIDVDSKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + NL+VE YS+ Sbjct: 179 EGTFKAVPERGD---LSADINENLIVELYSK 206 >gi|198273978|ref|ZP_03206510.1| hypothetical protein BACPLE_00114 [Bacteroides plebeius DSM 17135] gi|198273056|gb|EDY97325.1| hypothetical protein BACPLE_00114 [Bacteroides plebeius DSM 17135] Length = 201 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A G T L+ LE RLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-EKQFRNMFEKAAGMNGITGEILLQSLECRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI S+ K G ++ V++KSK L + + ++ + ++ + + Sbjct: 119 ITVDGKVVNIPSFSVKPGQLVGVREKSKSLEVIANSLAGFNHSKYPWLEWDENSKIGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ +L+VE YS+ Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201 >gi|294142909|ref|YP_003558887.1| 30S ribosomal protein S4 [Shewanella violacea DSS12] gi|293329378|dbj|BAJ04109.1| ribosomal protein S4 [Shewanella violacea DSS12] Length = 206 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL++ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARQKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVNG VNI S++ DVI +++KSK+ A + + ++A +R+ P ++ V++ M Sbjct: 119 SHKSILVNGSVVNIPSFKVSASDVISIREKSKKQARISASLEVASQREKPTWVEVDNTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206 >gi|49483960|ref|YP_041184.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MRSA252] gi|282904289|ref|ZP_06312177.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus C160] gi|282906114|ref|ZP_06313969.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909029|ref|ZP_06316847.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282919482|ref|ZP_06327217.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C427] gi|283958469|ref|ZP_06375920.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus A017934/97] gi|295428289|ref|ZP_06820918.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590748|ref|ZP_06949386.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MN8] gi|56749409|sp|Q6GFY8|RS4_STAAR RecName: Full=30S ribosomal protein S4 gi|49242089|emb|CAG40788.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MRSA252] gi|282317292|gb|EFB47666.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C427] gi|282327293|gb|EFB57588.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331406|gb|EFB60920.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Btn1260] gi|282595907|gb|EFC00871.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus C160] gi|283790618|gb|EFC29435.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus A017934/97] gi|295127689|gb|EFG57326.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575634|gb|EFH94350.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MN8] gi|315195623|gb|EFU26010.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus CGS00] Length = 200 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S +GLQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F A + G N + L SRLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K I V++KS++L ++E+ ++ VPEY++ + D++ TFV Sbjct: 119 ILVDGKRVDIPSYSVKPSQTISVREKSQKLNVIVESVEI-NNFVPEYLNFDADSLTGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200 >gi|56477618|ref|YP_159207.1| 30S ribosomal protein S4 [Aromatoleum aromaticum EbN1] gi|81357334|sp|Q5P308|RS4_AZOSE RecName: Full=30S ribosomal protein S4 gi|56313661|emb|CAI08306.1| 30S Ribosomal protein S4 [Aromatoleum aromaticum EbN1] Length = 209 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R+Y PG HGQR + S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKAEKCFTDKCAIERRAYAPGQHGQRSGQRMSGYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR ++ EA+R RG T NL+ LE RLD++VYR F + +RQ Sbjct: 61 KQKIRRLYGVL-EAQFRKVYAEAERRRGQTGENLLQLLEGRLDSVVYRMGFGGSRAESRQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +LVNG+ VNI SY + GDV+E+ + S+ V A + A R PE++ V+ Sbjct: 120 LVRHNGILVNGKRVNIPSYVVRPGDVVELTEGSRGQLRVKAALEAAASRGFPEWLDVDAK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + P + LVVE YSR Sbjct: 180 AGKGTFKAYPQRAE---LPPTINEGLVVELYSR 209 >gi|148263164|ref|YP_001229870.1| 30S ribosomal protein S4 [Geobacter uraniireducens Rf4] gi|189045382|sp|A5GAU5|RS4_GEOUR RecName: Full=30S ribosomal protein S4 gi|146396664|gb|ABQ25297.1| SSU ribosomal protein S4P [Geobacter uraniireducens Rf4] Length = 208 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + R+Y PG HGQ R +K S +G+QLR Sbjct: 1 MARYTGPSCRLCRRENTELFLKGERCYTDKCAIKRRNYPPGQHGQGR-TKTSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR F+ ADR +G T NL+ LE RLD I YR F + ARQ Sbjct: 60 KQKVRRIYG-ILENQFRGYFERADRLKGVTGENLLFLLERRLDNIAYRLGFASSRIEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NGR V I S + K GDV+E+++KS+++A + E+ + R +P+++ ++ Sbjct: 119 LVRHGHFTLNGRKVTIPSIQVKAGDVLELREKSRKVACINESLEAVVRRGIPQWLELDKG 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ +D+ P +Q L+VE YS+ Sbjct: 179 AYKGAVKTLPAR-EDITMP--IQEQLIVELYSK 208 >gi|299822736|ref|ZP_07054622.1| 30S ribosomal protein S4 [Listeria grayi DSM 20601] gi|299816265|gb|EFI83503.1| 30S ribosomal protein S4 [Listeria grayi DSM 20601] Length = 200 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQ KQK++ Sbjct: 1 MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPNQRKKLSEYGLQQAEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F++ F +A + G N + LE RLD +VYR T AARQ VNH H Sbjct: 60 MYG-LTERQFKNTFDKAGKLPGKQGENFMILLEQRLDNVVYRFGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY+ G VI V++KS + +S+ E+ ++ VPEY++ + + + + Sbjct: 119 IQVDGKRVDIPSYQVSVGQVITVREKSAKNSSIAESLDVSNF-VPEYVTFDAEKLEGSLN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200 >gi|117924179|ref|YP_864796.1| 30S ribosomal protein S4P [Magnetococcus sp. MC-1] gi|152060958|sp|A0L5Z7|RS4_MAGSM RecName: Full=30S ribosomal protein S4 gi|117607935|gb|ABK43390.1| SSU ribosomal protein S4P [Magnetococcus sp. MC-1] Length = 208 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ SK ++ RR L+ + K + R+Y PG HGQRR+ K S +G+ LR Sbjct: 1 MARYLGSKCRLCRREATKLFLKGEKCYSDKCAMERRNYVPGQHGQRRR-KVSDYGVHLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR+++K+A+R +G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKVKRSYG-LLEAQFRTLYKKAERMKGVTGENLLQLLERRLDNVVYRLGLAASRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 ++H+ +LVNG+ VN+ SY CK GDV+ V++KS+ + A A +R +P ++ V+ + Sbjct: 119 IISHKTLLVNGKMVNVPSYLCKPGDVVAVREKSRGQLRIKGALASAMQRGLPSWVEVDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +V TF IP P NL+VE YS+ Sbjct: 179 KLVGTFRSIPERSD---LPAEFNENLIVELYSK 208 >gi|313158250|gb|EFR57652.1| ribosomal protein S4 [Alistipes sp. HGB5] Length = 202 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 114/207 (55%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M K K KI R+ GE ++G K + R++ PG HG R++ K S +G QL KQK K Sbjct: 1 MGKYIGPKSKIARKFGEAIYGADK-VLEKRNFPPGQHGLARKRKKVSEYGTQLSEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+F + +A R G T NL+ LE RLD +VYR PT AARQ V+H Sbjct: 60 YTYG-LLEKQFARTYDQAARMGGITGENLLKLLECRLDNVVYRLGIAPTRAAARQLVSHC 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY + GDV+ V++KSK L + + + ++ ++ +M F Sbjct: 119 HICVNGNVVNIPSYSLRAGDVVSVREKSKSLEVISASLAGGSKSRYAWLEWDNASMSGKF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P + P ++ L+VE YS+ Sbjct: 179 LQKPEREE---IPENIKEQLIVELYSK 202 >gi|78043798|ref|YP_361091.1| 30S ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901] gi|90101680|sp|Q3A9U3|RS4_CARHZ RecName: Full=30S ribosomal protein S4 gi|77995913|gb|ABB14812.1| ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901] Length = 208 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 115/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + K + R+Y PG HG RK KP+ + LQLR Sbjct: 1 MARYTGPVCKLCRREGIKLFLKGDRCYTDKCAIARRNYAPGQHGHTRK-KPTEYALQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR F+ A+R G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKAKRIYGVL-EAQFRRYFEMAERQPGITGENLLVILERRLDNVVYRLGLAESRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H VNGR VNI SY K GDVI +K++ K E + A + +P ++S + + Sbjct: 119 LVRHNFFTVNGRKVNIPSYLVKVGDVIALKEEKKDSPIAKEIMERAASKTLPAWLSYDAN 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N V +P +D+ PV + +L+VE YSR Sbjct: 179 NAVGKVEALPKR-EDIDIPV--EEHLIVELYSR 208 >gi|320108369|ref|YP_004183959.1| 30S ribosomal protein S4 [Terriglobus saanensis SP1PR4] gi|319926890|gb|ADV83965.1| ribosomal protein S4 [Terriglobus saanensis SP1PR4] Length = 209 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K + R++ PG HGQ R K +GLQLR Sbjct: 1 MARYTGAVCRLCRRDGVKLFLKGTRCFSDKCAIEKRNFPPGQHGQARAKKIVGYGLQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ Y + E +FR+ +++A G T L+ LE+RLD +VYR F +RQ Sbjct: 61 KQKAKRIYFTL-ETQFRAYYEKASNRTGVTGELLLQQLETRLDNVVYRLGFAIARRQSRQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HV VNGR VNI S++ K GDVIE+++KSK+L A A + P ++ ++ D Sbjct: 120 VVRHGHVNVNGRKVNIPSFQVKVGDVIELREKSKKLTIAEGAKDFAAAQSTPTWLEIDRD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N + P +D+ PV L+VE YS+ Sbjct: 180 NYSGKVIAFPKR-EDIQLPV--NEQLIVELYSK 209 >gi|192359460|ref|YP_001981232.1| 30S ribosomal protein S4 [Cellvibrio japonicus Ueda107] gi|226697819|sp|B3PK61|RS4_CELJU RecName: Full=30S ribosomal protein S4 gi|190685625|gb|ACE83303.1| ribosomal protein S4 [Cellvibrio japonicus Ueda107] Length = 206 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + ++++ PG HGQ R+ + S +G+QLR KQ Sbjct: 1 MARYIGPTCKLSRREGTDLFLKSGARALDSKCKIETAPGQHGQ-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR +KEA R +G T NL+ LESRLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRGYYKEAARRKGATGENLLKLLESRLDNVVYRMGFGATRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ + VNG++VN+ S++ GDV+ V++K+K + A LA +R E++ VN + Sbjct: 119 SHKAISVNGKTVNVASFQVAAGDVVAVREKAKNQLRIQSALNLAGQRSNVEWVDVNTEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P V P + NL+VE YS+ Sbjct: 179 EGVFKRVPDR---VDLPADINENLIVELYSK 206 >gi|330719419|ref|ZP_08314019.1| 30S ribosomal protein S4 [Leuconostoc fallax KCTC 3537] Length = 203 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K ++ RR+G +L G K ++ R+Y PG HG R+SK S +G+QLR KQK++ Sbjct: 1 MSRYTGPKWRLSRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRSKLSEYGVQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F +A R T N + LE RLD++V+R F + ARQ VNH Sbjct: 60 TYG-LTERQFHALFNKAGSIRKGTHGTNFMILLEQRLDSLVFRLGFATSRAQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY G I V+ KSK + + A + A P+++S + D + + Sbjct: 119 HILVDGKRVDIPSYHVVPGQEISVRDKSKNIVPIQSAIE-AVVSRPQFVSFDADKLTGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + L+VE+Y+R Sbjct: 178 VRLPEREE---LDADINEALIVEYYNR 201 >gi|189424436|ref|YP_001951613.1| 30S ribosomal protein S4 [Geobacter lovleyi SZ] gi|226699069|sp|B3E856|RS4_GEOLS RecName: Full=30S ribosomal protein S4 gi|189420695|gb|ACD95093.1| ribosomal protein S4 [Geobacter lovleyi SZ] Length = 208 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + R+Y PG HGQ R K S +G+QLR Sbjct: 1 MARYIGPSCRLCRRENMELFLKGDRCYTDKCALKRRNYPPGQHGQGRS-KTSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FRS F ADR +G T NL+S LE RLD +VYR F + ARQ Sbjct: 60 KQKVKRLYG-LLEKQFRSYFDRADRMKGVTGENLLSLLERRLDNVVYRLGFASSRSEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H ++NGR I S + K GD I +++KS+ +A++ EA R +P+++ ++ D Sbjct: 119 LVRHGHFVLNGRKATIPSIQVKAGDTIVLREKSRNVAAISEALDAVVRRGIPQWLELDRD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +D+ P +Q L+VE YS+ Sbjct: 179 AFTGLAKTVPVR-EDISTP--IQEQLIVELYSK 208 >gi|332170584|gb|AEE19839.1| ribosomal protein S4 [Krokinobacter diaphorus 4H-3-7-5] Length = 201 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAVQLAEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR+++ A+R+ G T L+ E RLD +V+R P+ ARQ V HR Sbjct: 60 YTYG-ILERQFRNMYDRANRAPGITGEVLLQLCECRLDNVVHRMGMSPSRSGARQLVGHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI S++ K GDV+ V++KSK L + + Q + +V E+IS N+D TF Sbjct: 119 HITVNGSIVNIPSFQVKPGDVVAVREKSKSLEVISNSLQNSS-NVYEWISWNNDKKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V IP L+ P + +VE YS+ Sbjct: 178 VAIPQRLQ---IPENINTQFIVELYSK 201 >gi|116667413|pdb|2GY9|D Chain D, Structure Of The 30s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667465|pdb|2GYB|D Chain D, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 Length = 204 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 125/209 (59%), Gaps = 10/209 (4%) Query: 3 KRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKM 58 + K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+ Sbjct: 1 RYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 ++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+H Sbjct: 60 RRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 + ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 KAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R P + +L+VE YS+ Sbjct: 179 TFKRKPERSD---LSADINEHLIVELYSK 204 >gi|255038115|ref|YP_003088736.1| 30S ribosomal protein S4 [Dyadobacter fermentans DSM 18053] gi|254950871|gb|ACT95571.1| ribosomal protein S4 [Dyadobacter fermentans DSM 18053] Length = 201 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR GE + G K + ++Y PG+HG+ R+SK S + LQL KQK+K Sbjct: 1 MARYTGPKTKVARRYGEPIMGPSK-ALAKKNYPPGMHGKGRRSKKSEYALQLAEKQKVKF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I E++FRS+F++A G T NL+ + E+RLD VYR PT AARQ V+H+H Sbjct: 60 IYG-ILERQFRSLFEKASVKAGLTGENLLRYCEARLDNTVYRLGIAPTRRAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G VNI SY + G V+ V++KSK L +V ++ ++ N + F+ Sbjct: 119 ILVDGEIVNIPSYSLRPGQVVTVREKSKSLEAVTDSLAGHSSKGFSWLEWNGQELSGKFI 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P + L+VE YS+ Sbjct: 179 SYPDR---ESIPENINEQLIVELYSK 201 >gi|171914054|ref|ZP_02929524.1| 30S ribosomal protein S4 [Verrucomicrobium spinosum DSM 4136] Length = 203 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 81/208 (38%), Positives = 113/208 (54%), Gaps = 7/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 M++ K KI RR G L+G K + R++ PG HG R + K S +G+ L KQK++ Sbjct: 1 MARYTGPKEKIARRFGVALFGPSK-ALELRNFPPGQHGARNTRRKLSDYGIALAEKQKLR 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR F EA R +G T L+ LE RLD +VYR F + FAARQ V H Sbjct: 60 HTYGVL-EKQFRRFFAEASRRKGVTGTILLQMLEQRLDNVVYRMGFANSRFAARQMVGHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVAT 178 HV VNG+ NI S + K GDV+ VK ++ L + + P++++V+ D + T Sbjct: 119 HVTVNGKRCNIASAQIKAGDVVAVKSTARSQQLANRFLDLTQGVNSPDWMTVDRDKLTGT 178 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + V + LVVE YSR Sbjct: 179 VNRSPEREE---IDVFVNEQLVVELYSR 203 >gi|167031523|ref|YP_001666754.1| 30S ribosomal protein S4 [Pseudomonas putida GB-1] gi|189045393|sp|B0KK90|RS4_PSEPG RecName: Full=30S ribosomal protein S4 gi|166858011|gb|ABY96418.1| ribosomal protein S4 [Pseudomonas putida GB-1] Length = 206 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++ A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ + GDV+ V++KS +++A +L A+R E++ V+ Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSLAQLRIVQALELCAQRGRVEWVDVDAAKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + NL+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206 >gi|325299106|ref|YP_004259023.1| ribosomal protein S4 [Bacteroides salanitronis DSM 18170] gi|324318659|gb|ADY36550.1| ribosomal protein S4 [Bacteroides salanitronis DSM 18170] Length = 201 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I R+ GE ++G K ++ ++Y PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNTRRRKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A G T L+ LE RLD IV+R PT AARQ V+H+H Sbjct: 60 TYGVL-EKQFRNLFEKAASMNGITGEILLQSLECRLDNIVFRLGIAPTRAAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI S+ K G +I V++KSK L ++ + ++ + ++ + + Sbjct: 119 ITVDGKVVNIPSFAVKPGQLIGVREKSKSLEAIANSLAGFNHSKYPWLEWDENSKMGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P ++ +++VE YS+ Sbjct: 179 HVPERAD---IPENIKEHMIVELYSK 201 >gi|228470684|ref|ZP_04055535.1| ribosomal protein S4 [Porphyromonas uenonis 60-3] gi|228307541|gb|EEK16537.1| ribosomal protein S4 [Porphyromonas uenonis 60-3] Length = 201 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE ++G K ++ ++Y PG HG R+ K S + LQLR KQ K Sbjct: 1 MARYIGPKSKIARKFGEPIFGADK-VLSKKNYPPGQHGNNRRRKQSEYALQLREKQMAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A R+ G T L+ LESRLD +V+R PT AARQ V+HRH Sbjct: 60 TYGVL-ERQFRNLFEKAQRTSGITGEILLQLLESRLDNVVFRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SY K G ++ V+++ K + + ++ ++ + ++ Sbjct: 119 IVVDGEVVNIPSYTLKPGQIVGVRERDKSMEVIADSLAGYNHSKYPWLEWDARTYSGKYL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + P ++ L+VE YS+ Sbjct: 179 NVPTREE---IPEPIKEQLIVELYSK 201 >gi|322384358|ref|ZP_08058056.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150860|gb|EFX44297.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 199 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR+G +L G K R + PG HG ++ K S +G+QL KQK++ Sbjct: 1 MARYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGPTQRRKVSGYGMQLMEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+F +++ +A + G + N + LESRLD +V+R F + ARQ V+H H Sbjct: 59 MYG-LNEKQFHNLYNKAIKLPGISGENFMILLESRLDNLVFRLGFANSRAGARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SY+ GDVI ++++S+ L S+ EA + +P Y+ N + F+ Sbjct: 118 VTVNGKKVDIASYQVSVGDVIGLRERSRNLKSIKEALE-NRNFLPAYLEFNEQALEGKFI 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 177 RLPERSE---LAQEIDEKQIVEFYSR 199 >gi|116749016|ref|YP_845703.1| 30S ribosomal protein S4 [Syntrophobacter fumaroxidans MPOB] gi|152112270|sp|A0LIL6|RS4_SYNFM RecName: Full=30S ribosomal protein S4 gi|116698080|gb|ABK17268.1| SSU ribosomal protein S4P [Syntrophobacter fumaroxidans MPOB] Length = 208 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S +I RR L+ + K V R+Y PG HGQ R K S +GLQLR Sbjct: 1 MARYTDSSCRICRRETMKLYLKGDRCYSDKCAVERRNYPPGQHGQGR-GKFSDYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+F++ FK ADR +G T N ++ LE R+D VYR F + ARQ Sbjct: 60 KQKIRRMYGLV-EKQFKTYFKHADRQKGVTGTNFLTLLERRIDNTVYRLGFASSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H LVNG+ VNI S+ + GD + V + S+QL + EA + + R +P ++ ++ Sbjct: 119 LVRHSHFLVNGKKVNIPSFLLRPGDSVSVVEGSRQLQMINEAMEAMPRRGLPPWLELDKA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + + +Q LVVEFYS+ Sbjct: 179 KYEGVFKTLPTREE---MNLPVQEQLVVEFYSK 208 >gi|26987219|ref|NP_742644.1| 30S ribosomal protein S4 [Pseudomonas putida KT2440] gi|148545763|ref|YP_001265865.1| 30S ribosomal protein S4 [Pseudomonas putida F1] gi|37999419|sp|Q88QL2|RS4_PSEPK RecName: Full=30S ribosomal protein S4 gi|172048431|sp|A5VXS1|RS4_PSEP1 RecName: Full=30S ribosomal protein S4 gi|24981858|gb|AAN66108.1|AE016239_3 ribosomal protein S4 [Pseudomonas putida KT2440] gi|148509821|gb|ABQ76681.1| SSU ribosomal protein S4P [Pseudomonas putida F1] gi|313496843|gb|ADR58209.1| RpsD [Pseudomonas putida BIRD-1] Length = 206 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++ A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ + GDV+ V++KS +++A +L A+R E++ V+ Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSLGQLRIVQALELCAQRGRVEWVDVDAAKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + NL+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206 >gi|46205031|ref|ZP_00049140.2| COG0522: Ribosomal protein S4 and related proteins [Magnetospirillum magnetotacticum MS-1] Length = 191 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 130/192 (67%), Positives = 150/192 (78%), Gaps = 1/192 (0%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K YYG+I+EK+FR + Sbjct: 1 MGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKGYYGNITEKQFRRYY 60 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 EA R RGD+ NLI LE RLD +VYRAKFV T FAARQFVNH HV VNGR VNI S++ Sbjct: 61 AEAIRLRGDSGENLIGLLERRLDAVVYRAKFVATPFAARQFVNHGHVKVNGRRVNIPSFQ 120 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K GDVIEVK+ S+QL V+ ASQLAERDVP+YI V+H M A RIP L +VPYPV Sbjct: 121 VKAGDVIEVKEASRQLEIVVVASQLAERDVPDYIEVDHQKMSARVTRIPG-LSEVPYPVQ 179 Query: 195 MQPNLVVEFYSR 206 M+PNLV+EFYSR Sbjct: 180 MEPNLVIEFYSR 191 >gi|262377288|ref|ZP_06070512.1| ribosomal protein S4 [Acinetobacter lwoffii SH145] gi|262307741|gb|EEY88880.1| ribosomal protein S4 [Acinetobacter lwoffii SH145] Length = 208 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + ++ PG HG R K S + LQLR K Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHAKVPGQHGGARGGKQSEYSLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDN 174 V+HR + +NGR VNI S + K GDVI V + +KQ + A +LA +R +P ++ ++H Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELATQRGMPSWMEIDHSK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF P P + +L+VE YS+ Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208 >gi|47565070|ref|ZP_00236113.1| ribosomal protein S4 [Bacillus cereus G9241] gi|47557856|gb|EAL16181.1| ribosomal protein S4 [Bacillus cereus G9241] Length = 200 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K G I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + L+VEFYSR Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200 >gi|297569396|ref|YP_003690740.1| ribosomal protein S4 [Desulfurivibrio alkaliphilus AHT2] gi|296925311|gb|ADH86121.1| ribosomal protein S4 [Desulfurivibrio alkaliphilus AHT2] Length = 209 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + K RSY PG HGQ R K S + LQLR Sbjct: 1 MARYTGAVCRQCRREKLKLFLKGDRCYSDKCSFERRSYAPGQHGQARLRKVSDYALQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F EA+R RG T L+ LESRLD +VYR F + AR Sbjct: 61 KQKVKRIYGML-EDQFRRYFDEAERRRGVTGEILLQMLESRLDNVVYRLGFAASRNQARH 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H L+NGR VNI S + K GDVI +++KS+++ ++ E+ A R VP ++ +N D Sbjct: 120 LVRHNHFLLNGRKVNIPSLQVKVGDVITLREKSREVEAIKESLAAVARRGVPTWLELNQD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P + + +Q L+VE YS+ Sbjct: 180 AFSGTVKSAPDRQE---LTMPIQEQLIVELYSK 209 >gi|94266329|ref|ZP_01290031.1| Ribosomal protein S4:RNA-binding S4 [delta proteobacterium MLMS-1] gi|93453083|gb|EAT03562.1| Ribosomal protein S4:RNA-binding S4 [delta proteobacterium MLMS-1] Length = 209 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + K RSY PG HGQ R K S + +QLR Sbjct: 1 MARYTGAVCRQCRREKLKLFLKGDRCYSDKCSFERRSYAPGQHGQARLRKVSDYAMQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +F F EA+R RG T NL+ LE RLD ++YR F + AR Sbjct: 61 KQKVKRMYGML-EGQFHRYFVEAERQRGVTGENLLRLLECRLDNVIYRLGFASSRNQARH 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173 V H H L+NG VNI S + K GDV+ V++KS+Q + E+ +A R VP ++ +N + Sbjct: 120 LVRHNHFLLNGHKVNIPSLQVKVGDVLTVREKSRQKGMIQESLAAMARRGVPTWLELNQE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P + + +Q L+VE YS+ Sbjct: 180 AFSGTVKSAPERQE---LTMPIQEQLIVELYSK 209 >gi|110639510|ref|YP_679719.1| 30S ribosomal protein S4 [Cytophaga hutchinsonii ATCC 33406] gi|123058544|sp|Q11QD7|RS4_CYTH3 RecName: Full=30S ribosomal protein S4 gi|110282191|gb|ABG60377.1| SSU ribosomal protein S4P [Cytophaga hutchinsonii ATCC 33406] Length = 201 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I RR GE + G K + ++Y PG+HG+ +K K S + +QL+ KQK K Sbjct: 1 MARYTGPRSRISRRFGEPVMGDSK-ALQKKNYAPGMHGRNKKRKQSEYSIQLKEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++F F A R +G T NL+ LE+RLD VYR + AARQ V H+H Sbjct: 60 TYGVL-ERQFAKTFDTAARKQGITGENLLKMLEARLDNTVYRLGIASSRRAARQLVIHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VNG VNI SY+ K GD + V++KSK + ++ ++ ++ + +M+ FV Sbjct: 119 IVVNGDVVNIPSYQLKPGDQLGVREKSKSIEAITDSLSTQSAKKFTWLEWDQSSMLGKFV 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + P +Q L+VE YS+ Sbjct: 179 TYPQREE---IPENIQEQLIVELYSK 201 >gi|226942802|ref|YP_002797875.1| 30S ribosomal protein S4 [Azotobacter vinelandii DJ] gi|259495268|sp|C1DKN7|RS4_AZOVD RecName: Full=30S ribosomal protein S4 gi|226717729|gb|ACO76900.1| 30S ribosomal protein S4 [Azotobacter vinelandii DJ] Length = 206 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS-PVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + S + ++ PG+HGQRR Y G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGSRALESKCNVESAPGIHGQRRGRLSEY-GTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +KEA R +G T NL+ LE RLD +VYR F T +RQ + Sbjct: 60 KVRRIYGVL-ERQFSGYYKEASRRKGSTGENLLQLLECRLDNVVYRMGFGATRAESRQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ K GDV+ +++K+K + +A +L A+R E++ V+ + Sbjct: 119 SHKAITVNGQTVNIPSYQVKVGDVVAIREKAKNQLRIAQALELCAQRGRVEWVEVDTEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + NL+VE YS+ Sbjct: 179 SGVFKSVPARSD---LSADINENLIVELYSK 206 >gi|104779779|ref|YP_606277.1| 30S ribosomal protein S4 [Pseudomonas entomophila L48] gi|152112249|sp|Q1IFU2|RS4_PSEE4 RecName: Full=30S ribosomal protein S4 gi|95108766|emb|CAK13460.1| 30S ribosomal protein S4 [Pseudomonas entomophila L48] Length = 206 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR ++ A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQMLECRLDNVVYRMGFGSTRSESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VNI SY+ + GDV+ V++KS +++A +L A+R E++ V+ Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVSVREKSLNQLRIVQALELCAQRGRVEWVDVDAAKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + NL+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206 >gi|78189781|ref|YP_380119.1| 30S ribosomal protein S4 [Chlorobium chlorochromatii CaD3] gi|90101681|sp|Q3APJ9|RS4_CHLCH RecName: Full=30S ribosomal protein S4 gi|78171980|gb|ABB29076.1| SSU ribosomal protein S4P [Chlorobium chlorochromatii CaD3] Length = 203 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R + PG HGQ RK K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGIALAPKAEKYLERRPFPPGQHGQGRKGKISEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR+ +K+A RG T NL+ LE RLD IV+RA F P+ ARQ V+H H Sbjct: 61 LYG-ILEKQFRNYYKKAVAQRGVTGDNLVKLLERRLDNIVFRAGFSPSRAGARQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 V VNG+ V+I SY DV+E +QKSK +++V ++ E +P +I V+ + A F Sbjct: 120 VTVNGKKVDIPSYLVSPADVMEFRQKSKNMSAVTDSLNKTPESRIPAWIQVDKAHQKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P LVVE YS+ Sbjct: 180 LSVPERAD---IQEEFNEQLVVELYSK 203 >gi|163859246|ref|YP_001633544.1| 30S ribosomal protein S4 [Bordetella petrii DSM 12804] gi|226697810|sp|A9IHR7|RS4_BORPD RecName: Full=30S ribosomal protein S4 gi|163262974|emb|CAP45277.1| 30S ribosomal protein S4 [Bordetella petrii] Length = 207 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +GLQLR KQ Sbjct: 1 MARYTGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T ARQ V Sbjct: 61 KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR + VNG + +I S K GDVI V++K+K+ + EA LA +P+++ V+ + M Sbjct: 120 SHRAIEVNGHTADIASLIVKAGDVITVREKAKKQGRIREALDLASSIGIPQWVEVDTNKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + ++VVE YSR Sbjct: 180 AGTFKSMPDRAD---VARDINESMVVELYSR 207 >gi|145588266|ref|YP_001154863.1| ribosomal protein S4 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189045391|sp|A4SUY5|RS4_POLSQ RecName: Full=30S ribosomal protein S4 gi|145046672|gb|ABP33299.1| SSU ribosomal protein S4P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 207 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++T+ PG HG+ S+ S +G QLR Sbjct: 1 MARYLGPKAKLARREGTDLFLKSARRALSDKCKLDTK---PGQHGRTSGSRTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EA+R +G+T L+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEAERRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172 Q V+H +L+NG VNI S + K GDV+ +++K+K+ A + E+ L + ++SV+ Sbjct: 117 QLVSHCAILLNGSPVNIPSIQVKPGDVVAIREKAKKQARITESLNLVGQMAAVTWVSVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF ++P + +L+VE YSR Sbjct: 177 AKLEGTFKQVPDR---EDISGEINESLIVELYSR 207 >gi|15605669|ref|NP_213044.1| 30S ribosomal protein S4 [Aquifex aeolicus VF5] gi|6226103|sp|O66484|RS4_AQUAE RecName: Full=30S ribosomal protein S4 gi|2982819|gb|AAC06442.1| ribosomal protein S04 [Aquifex aeolicus VF5] Length = 211 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 6/211 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQ 56 M + K+DRR G + G+ +P + R+Y PG HG++ R+ K + +GL+L KQ Sbjct: 1 MGRYIGPWVKLDRRFGVVVSGKKSAPKILARRNYPPGQHGRKYGRRKKLTEYGLRLMEKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K YG + EK+F+ F A +S+ +T L+ +LE RLD +VYR F T ARQ V Sbjct: 61 KLKFLYGGLREKQFKKYFDMASKSKENTGEMLLQYLERRLDNVVYRLGFASTRRQARQLV 120 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H HVLVNG+ VNI SY + GDVIE+K+KS+ + + E + + R +P ++ ++ DN Sbjct: 121 AHGHVLVNGKKVNIPSYLVEPGDVIEIKEKSRDIPFIKENLENVDPRSIPSWLELDKDNF 180 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P ++++ + + +VEFYS+ Sbjct: 181 RGRVVRLPENVQEY-LEIPINLQYIVEFYSK 210 >gi|83591248|ref|YP_431257.1| 30S ribosomal protein S4 [Moorella thermoacetica ATCC 39073] gi|123725621|sp|Q2RFS5|RS4_MOOTA RecName: Full=30S ribosomal protein S4 gi|83574162|gb|ABC20714.1| SSU ribosomal protein S4P [Moorella thermoacetica ATCC 39073] Length = 208 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + S ++ RR G L+ + K V RSY PG HGQ RK Y GLQLR Sbjct: 1 MARYKDSTCRLCRREGTKLFLKGDRCYSDKCAVARRSYPPGQHGQGRKKVSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E++FR+ F++A+R +G T NL+ LE RLD +VYR F + AR Sbjct: 60 KQKVRRIYG-ILERQFRNYFEKAERQKGVTGENLLILLERRLDNVVYRLGFADSRAEART 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173 V H H LVNGR VNI SY + GD I V++KSK E A A R+VP ++ + Sbjct: 119 LVRHGHFLVNGRKVNIPSYLVRPGDTISVREKSKASPKFKEIAEAAAHRNVPAWLKADSS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+ + Q +L+VE YSR Sbjct: 179 TLEGHVLALPTREQ---IDTPAQEHLIVELYSR 208 >gi|258513667|ref|YP_003189889.1| 30S ribosomal protein S4 [Desulfotomaculum acetoxidans DSM 771] gi|257777372|gb|ACV61266.1| ribosomal protein S4 [Desulfotomaculum acetoxidans DSM 771] Length = 208 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K ++ RSY PG HGQ R+ Y G QLR Sbjct: 1 MARYTGPQCKLCRREGLKLYLKGDRCYSDKCAIDRRSYPPGQHGQSRRKVSEY-GTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+FR+ F ADR +G T NL+ LE R+D +++R + ARQ Sbjct: 60 KQKVRRIYGVL-EKQFRTYFDRADRQQGITGENLLRLLERRMDNVIFRMGLGASRVEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H VNGR V+I S+ K GDVI +++ SK + E + AE+ P ++ + D Sbjct: 119 LVTHGHFTVNGRKVDIPSFLVKVGDVIGIREGSKDSPRIKELMERAAEKTRPAWLEYDSD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + +Q +L+VE YSR Sbjct: 179 AAQGRIVALPRRDE---IDAPVQEHLIVELYSR 208 >gi|148244353|ref|YP_001219047.1| 30S ribosomal protein S4 [Candidatus Vesicomyosocius okutanii HA] gi|172047241|sp|A5CXI8|RS4_VESOH RecName: Full=30S ribosomal protein S4 gi|146326180|dbj|BAF61323.1| 30S ribosomal protein S4 [Candidatus Vesicomyosocius okutanii HA] Length = 208 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 126/212 (59%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQR-RKSKPSYFGLQLRAK 55 M++ K+ RR G +L+ + ++++ PG+HG R+ K + +GLQLR K Sbjct: 1 MARYTGPTCKLARREGADLFLKSGIRSLDSKCKVTQLPGMHGASARRQKGTEYGLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG I EK+FR +K+A + +G T NL+S LE RLD +VYR F T ARQ Sbjct: 61 QKIRRIYG-ILEKQFRLYYKKASQKKGSTGENLLSLLECRLDNVVYRMGFASTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDN 174 V+H+ ++VNG VNI SY+ D I +++K+K+ + + A +L+ + P+++ V++ Sbjct: 120 VSHKSIMVNGLVVNIPSYQVSVNDKISIREKAKKQSRIQLALELSGQSTQPQWLDVDNKT 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +PS + P +Q +L+VE YS+ Sbjct: 180 LKGVFKNVPSRDE---LPSDIQEHLIVELYSK 208 >gi|81428454|ref|YP_395454.1| 30S ribosomal protein S4 [Lactobacillus sakei subsp. sakei 23K] gi|90101691|sp|Q38XD6|RS4_LACSS RecName: Full=30S ribosomal protein S4 gi|78610096|emb|CAI55145.1| 30S Ribosomal protein S4 [Lactobacillus sakei subsp. sakei 23K] Length = 201 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 117/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K K+ RR+G +L G K + R Y PG HG R+ K S +G+QL KQK++ Sbjct: 1 MSRYTGPKWKLSRRLGISLSGTGKE-LARRPYAPGQHGNDRRGKISEYGMQLSEKQKLRL 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R NL+ LE RLD IVYR T ARQ VNH Sbjct: 60 MYG-LTERQFRNLFARAGKIREGKHGVNLMILLEQRLDNIVYRLGLASTRAQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV V+G+ V+I SY K G I +++KSK L + +A + P ++ + DN+ + Sbjct: 119 HVTVDGKRVDIPSYEVKPGQEISIREKSKNLVIIKDAIE-GTVGRPSFVEFDADNLKGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + L+VEFY+R Sbjct: 178 VRLPERSELEP---EIDEALIVEFYNR 201 >gi|301628935|ref|XP_002943604.1| PREDICTED: 30S ribosomal protein S4-like, partial [Xenopus (Silurana) tropicalis] Length = 212 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 15/213 (7%) Query: 2 SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 ++ K K+ RR G +L+ + K+ +++ PG HG+ + S +GLQLR Sbjct: 7 ARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGQRTSDYGLQLRE 63 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR F EADR +G+T NL++ LE RLD +VYR F T ARQ Sbjct: 64 KQKVKRMYG-VMEKQFRRYFAEADRRKGNTGANLLTLLECRLDNMVYRMGFGSTRAEARQ 122 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V+H+ +LVNG++VNI S+ K GDV+ V++KSK+ V+EA QLA++ P ++ V D Sbjct: 123 LVSHKAILVNGQAVNIPSFLVKVGDVVSVREKSKKQGRVVEALQLAQQVGFPAWVEVAAD 182 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F ++P + + + +L+VE YSR Sbjct: 183 KAEGVFKKVPDRDE---FGADINESLIVELYSR 212 >gi|190572967|ref|YP_001970812.1| 30S ribosomal protein S4 [Stenotrophomonas maltophilia K279a] gi|194364557|ref|YP_002027167.1| 30S ribosomal protein S4 [Stenotrophomonas maltophilia R551-3] gi|254521741|ref|ZP_05133796.1| ribosomal protein S4 [Stenotrophomonas sp. SKA14] gi|226695080|sp|B4SLH4|RS4_STRM5 RecName: Full=30S ribosomal protein S4 gi|226695081|sp|B2FQK7|RS4_STRMK RecName: Full=30S ribosomal protein S4 gi|190010889|emb|CAQ44498.1| putative 30S ribosomal subunit protein S4 [Stenotrophomonas maltophilia K279a] gi|194347361|gb|ACF50484.1| ribosomal protein S4 [Stenotrophomonas maltophilia R551-3] gi|219719332|gb|EED37857.1| ribosomal protein S4 [Stenotrophomonas sp. SKA14] Length = 209 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQR-RKSKPSYFGLQL 52 M++ K+ RR G +L + K + + PG HG RK K S + QL Sbjct: 1 MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGATARKGKLSDYATQL 57 Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 R KQK+K+ YG + E++FR+ +K+A +G+T NL+ LE+RLD +VYR F T AA Sbjct: 58 REKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPAA 116 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISV 170 RQ V+HR V VNG+SVN+ SY+ K GD I + +K+ + V EA +A + P ++ V Sbjct: 117 RQLVSHRGVTVNGKSVNLASYQVKAGDAIALSEKAAKQLRVQEALTVAAQHDLSPSWVEV 176 Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +P P + L+VE YS+ Sbjct: 177 DSGKFTGIFKAVPDRSD---LPADINEALIVELYSK 209 >gi|225175647|ref|ZP_03729641.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1] gi|225168976|gb|EEG77776.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1] Length = 209 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S + RR G L+ + K V+ R+Y PG HGQRR+ K S +GLQLR Sbjct: 1 MARYTGSVCRQCRREGLKLYLKGERCYTEKCAVDRRAYAPGQHGQRRRGKVSEYGLQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + E +F FKEADR +G T NL+ LESRLD +VYR F + ARQ Sbjct: 61 KQKARRTYGVL-ESQFHKYFKEADRRKGITGENLLQILESRLDNVVYRMGFALSRPEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNGR V+I SY+ + DV+ V++ S+ + ++L + E+++V+ + Sbjct: 120 LVKHGHFTVNGRKVDIPSYQVRPDDVVAVREASRDKGRFKDLAELMRTQGTMEWVNVDRE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ +R+P+ + + + +L+VE YSR Sbjct: 180 NLAGKVLRLPTREE---IDIPIAEHLIVELYSR 209 >gi|119502947|ref|ZP_01625032.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2080] gi|119461293|gb|EAW42383.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2080] Length = 206 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + ++++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLQLKSGVRSLDSKCKAETAPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LESRLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVNG VNI SY+ + GD++ V++K+K+ + A +AE R +I VN + + Sbjct: 119 SHKGILVNGTVVNIPSYQVRPGDIVSVREKAKKQLRIQAAMSIAEQRGEQVWIEVNSEKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P P + NL+VE YS+ Sbjct: 179 EGTFKSKPERQD---LPSEINENLIVELYSK 206 >gi|327402758|ref|YP_004343596.1| 30S ribosomal protein S4P [Fluviicola taffensis DSM 16823] gi|327318266|gb|AEA42758.1| SSU ribosomal protein S4P [Fluviicola taffensis DSM 16823] Length = 203 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 7/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQKM 58 M++ K KI RR + ++G K ++ R YGPG HG RR K S + +QL KQK Sbjct: 1 MARYTGPKSKIARRFRDPIFGPDK-ALDKRQYGPGQHGPNKRRGGKQSEYAIQLGEKQKA 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I E++F ++FK+A +G T NL+ E RLD VYR + AARQ V+H Sbjct: 60 KYTYG-ILERQFSNLFKKASGMKGITGENLLQLCEMRLDNTVYRLGIANSRRAARQLVSH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 +H++VNG VNI SY + GDV+ V++KSK L ++ + + +++ + Sbjct: 119 KHIVVNGEVVNIPSYTLRIGDVVSVREKSKSLEAITSSLTASTNKRYDWLDWDSATKSGK 178 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F+ IPS P ++ L+VE YS+ Sbjct: 179 FLSIPSRD---MIPENIKEQLIVELYSK 203 >gi|146308899|ref|YP_001189364.1| 30S ribosomal protein S4 [Pseudomonas mendocina ymp] gi|172046040|sp|A4XZ66|RS4_PSEMY RecName: Full=30S ribosomal protein S4 gi|145577100|gb|ABP86632.1| SSU ribosomal protein S4P [Pseudomonas mendocina ymp] Length = 206 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +K+A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKQAASQKGATGENLLQLLECRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VN+ SY+ K GDV+ V++KSK + +A +L A+R E++ V+ + Sbjct: 119 SHKAISVNGQTVNVPSYQVKAGDVVAVREKSKNQLRIAQALELCAQRGRVEWVEVDAEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARGD---LSADINESLIVELYSK 206 >gi|16331506|ref|NP_442234.1| 30S ribosomal protein S4 [Synechocystis sp. PCC 6803] gi|1350999|sp|P48939|RS4_SYNY3 RecName: Full=30S ribosomal protein S4 gi|1001162|dbj|BAA10304.1| 30S ribosomal protein S4 [Synechocystis sp. PCC 6803] Length = 202 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE KSP R+Y PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGELPGLSRKSP--RRAYPPGQHGQARRKRSEY-AIRLEEKQKLRL 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+EK+ K+A R+ G T L+ LE RLD V+R TI ARQ V H H Sbjct: 58 NYG-ITEKQLVRYVKKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVCHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNG+ V+I SY+C+ GD++ V+ + + V + +VP ++ + + Sbjct: 117 ITVNGQVVDIPSYQCRPGDIVSVRDRDRSRKLVETNMEFPGLANVPSHLEFDKNTFTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LV+E+YSR Sbjct: 177 NSVIDR---EWVALQINELLVIEYYSR 200 >gi|326799154|ref|YP_004316973.1| ribosomal protein S4 [Sphingobacterium sp. 21] gi|326549918|gb|ADZ78303.1| ribosomal protein S4 [Sphingobacterium sp. 21] Length = 202 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ E ++G K + ++Y PG+HG +R+ K S + +QL+ KQK K Sbjct: 1 MARYTGPKSKIARKFREPIFGPDK-ALERKNYPPGMHGVSKRRGKQSEYAIQLQEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++F ++F +A G T NL+ FLE+RLD V+R PT ARQ V H+ Sbjct: 60 YTYGVL-ERQFANLFDKAASKEGITGENLLKFLEARLDNTVFRLGIAPTRAGARQLVGHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ VNI SY + GDVI V+++SK L +V+ + +++ ++ + + + F Sbjct: 119 HITVNGQVVNIPSYSVRPGDVIAVRERSKTLEAVVNSVAGRKQNKYSWLEWDANGLTGKF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + P ++ L+VE YS+ Sbjct: 179 LNYPNRDE---IPENIKEQLIVELYSK 202 >gi|168187786|ref|ZP_02622421.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund] gi|169294366|gb|EDS76499.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund] Length = 206 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HGQ RK +Y G+QLR Sbjct: 1 MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR +++A+ RG T NL+ LE RLD +VY+ F + ARQ Sbjct: 60 KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLKLLEMRLDNVVYKLGFGSSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY+ GDVI V++KS+ ++ + +P ++ N +N Sbjct: 119 LVTHGHFLVNGKKVDIISYQVSAGDVISVREKSRGTEKFKTFAENP-KTLPAWLEGNIEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ V V + L+VE YS+ Sbjct: 178 FEGKVIAEPTR---VDIDVPVNETLIVELYSK 206 >gi|296131863|ref|YP_003639110.1| ribosomal protein S4 [Thermincola sp. JR] gi|296030441|gb|ADG81209.1| ribosomal protein S4 [Thermincola potens JR] Length = 208 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K ++ R Y PG+HGQ RK Y G+QLR Sbjct: 1 MARYTGPVCRLCRREGAKLYLKGDRCYSDKCAIDRRGYAPGMHGQGRKKISEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR+ F +ADR G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKARRIYGVL-EKQFRNYFAKADRQPGVTGENLLRLLERRLDNVVYRLGFASSRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H VN + VNI SY K GDVI++K+KS +L + E + A + P ++ ++ D Sbjct: 119 LVRHGHFTVNDKKVNIPSYSLKVGDVIKIKEKSLELPRIKELLEQAAHKTPPAWLELDVD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V IPS + V ++ +L+VE YSR Sbjct: 179 QHLGKVVAIPSREE---IDVPIEEHLIVELYSR 208 >gi|163942386|ref|YP_001647270.1| 30S ribosomal protein S4 [Bacillus weihenstephanensis KBAB4] gi|229013860|ref|ZP_04170988.1| 30S ribosomal protein S4 [Bacillus mycoides DSM 2048] gi|229062341|ref|ZP_04199659.1| 30S ribosomal protein S4 [Bacillus cereus AH603] gi|229135493|ref|ZP_04264279.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST196] gi|229169382|ref|ZP_04297092.1| 30S ribosomal protein S4 [Bacillus cereus AH621] gi|226697804|sp|A9VKG5|RS4_BACWK RecName: Full=30S ribosomal protein S4 gi|163864583|gb|ABY45642.1| ribosomal protein S4 [Bacillus weihenstephanensis KBAB4] gi|228614145|gb|EEK71260.1| 30S ribosomal protein S4 [Bacillus cereus AH621] gi|228647958|gb|EEL04007.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST196] gi|228716946|gb|EEL68630.1| 30S ribosomal protein S4 [Bacillus cereus AH603] gi|228747529|gb|EEL97404.1| 30S ribosomal protein S4 [Bacillus mycoides DSM 2048] Length = 200 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 116/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SYR K I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 ITVDGARVDIPSYRVKPNQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + L+VEFYSR Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200 >gi|261378065|ref|ZP_05982638.1| ribosomal protein S4 [Neisseria cinerea ATCC 14685] gi|269145515|gb|EEZ71933.1| ribosomal protein S4 [Neisseria cinerea ATCC 14685] Length = 206 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHG-GKKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EA+R +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEAERRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + VNG+ VNI S++ K GDV+ +++K+K+ + EA LA + +P +++V+ + + Sbjct: 119 SHKAIAVNGQVVNIPSFQVKVGDVVSIREKAKKQVRIQEALSLATQVGLPGWVAVDANKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + + LVVEFYS+ Sbjct: 179 EGVFKNMPDRAE---LTGDINEQLVVEFYSK 206 >gi|291514967|emb|CBK64177.1| SSU ribosomal protein S4P [Alistipes shahii WAL 8301] Length = 202 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M K K KI R+ GE ++G K + R+Y PG HG R++ K S +G QL KQK K Sbjct: 1 MGKYIGPKSKIARKFGEAIYGADK-VLEKRNYPPGQHGLARKRKKVSEYGTQLSEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+F +++A R G T NL+ LE RLD +VYR PT AARQ V+H Sbjct: 60 YTYG-LLEKQFSRTYEQAARMGGITGENLLKLLECRLDNVVYRLGIAPTRAAARQLVSHC 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY + GDV+ V++KSK L + + + + ++ ++ +M F Sbjct: 119 HICVNGSVVNIPSYSLRAGDVVSVREKSKSLEVISASLAGSSKSRYAWLEWDNASMSGRF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P + P ++ L+VE YS+ Sbjct: 179 LQKPEREE---IPENIKEQLIVELYSK 202 >gi|294674745|ref|YP_003575361.1| 30S ribosomal protein S4 [Prevotella ruminicola 23] gi|294473372|gb|ADE82761.1| ribosomal protein S4 [Prevotella ruminicola 23] Length = 202 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR GE ++G K ++ R++ PG HG R+ K S + + L KQK K Sbjct: 1 MARYLGPKSKIARRFGEPIFGADK-VLSRRNFPPGQHGNNRRRKMSEYAVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR++F++A ++ G T L+ LESRLD +V+R PT AARQ V H+H Sbjct: 60 TYGVL-ERQFRNMFEKAAKAEGITGEVLLQNLESRLDNVVFRLGIAPTRAAARQLVGHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ VNI SY K G V+ V++KSK L + A +I + + F+ Sbjct: 119 ITVDGQVVNIPSYAVKPGQVVAVREKSKSLEVIEAALAGFNHSKYPWIEWDENVKGGKFL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|119946251|ref|YP_943931.1| ribosomal protein S4 [Psychromonas ingrahamii 37] gi|152060918|sp|A1SXW7|RS4A_PSYIN RecName: Full=30S ribosomal protein S4 A gi|119864855|gb|ABM04332.1| SSU ribosomal protein S4P [Psychromonas ingrahamii 37] Length = 206 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGVHGA-RKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KE+ R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKESARLQGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ VLVNG+ VNI S+ K DVI +++K+K+ + + A ++A +R+VP ++SV+ M Sbjct: 119 SHKAVLVNGKVVNIPSFNVKASDVIAIREKAKKQSRIGAALEIAGQREVPTWVSVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + L++E YS+ Sbjct: 179 EGVFTRQPERSD---LSAEINEQLIIELYSK 206 >gi|293602599|ref|ZP_06685042.1| 30S ribosomal protein S4 [Achromobacter piechaudii ATCC 43553] gi|292818971|gb|EFF78009.1| 30S ribosomal protein S4 [Achromobacter piechaudii ATCC 43553] Length = 207 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T ARQ V Sbjct: 61 KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR + +NG + +I S K GDV+ +++K+K+ + E+ LA +P+++ V+ + Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVVSIREKAKKQGRIKESLDLATSIGIPQWVEVDATKL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + ++VVE YSR Sbjct: 180 TGTFKSVPDRAD---VARDINESMVVELYSR 207 >gi|329893623|ref|ZP_08269757.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088] gi|328923550|gb|EGG30862.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088] Length = 206 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HG R+ + S +G+QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGARALESKCKLETAPGMHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I EK+FR +KEA R +G T NL+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRIYG-ILEKQFRGYYKEAARRKGATGENLLQLLESRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ VLVNG VN+ SY+ + GDV+ V++K+K+ + A LA +R E+I VN D + Sbjct: 119 SHKGVLVNGSVVNVPSYQVQPGDVVAVREKAKKQLRIQSAVALAGQRADIEWIDVNTDKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F P + + NL+VE YS+ Sbjct: 179 EGVFKARPERAELTS---EINENLIVELYSK 206 >gi|325267152|ref|ZP_08133820.1| 30S ribosomal protein S4 [Kingella denitrificans ATCC 33394] gi|324981390|gb|EGC17034.1| 30S ribosomal protein S4 [Kingella denitrificans ATCC 33394] Length = 206 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + + ++ PG HG +K + S +GLQLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLYLKSARRSLESKCKMDSAPGQHGA-KKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + VNG+ VNI S++ K GDV+ V++K+K+ + EA LA + +P +++V+ + Sbjct: 119 SHKALTVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEAMGLATQIGLPSWVAVDASKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + + LVVEFYS+ Sbjct: 179 EGTFKNVPDRAELYS---DINEQLVVEFYSK 206 >gi|114567813|ref|YP_754967.1| 30S ribosomal protein S4 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317309|sp|Q0AUK8|RS4_SYNWW RecName: Full=30S ribosomal protein S4 gi|114338748|gb|ABI69596.1| SSU ribosomal protein S4P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 209 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + S + RR GE L+ + K V+ R+Y PG HGQ R+ KPS +G+QLR Sbjct: 1 MGRYTDSVCRQCRREGEKLFLKGDRCYSEKCSVSRRAYPPGAHGQGRRQKPSEYGIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I EK+FR+ F++ADR +G T NL+ LE RLD +VYR F + ARQ Sbjct: 61 KQKTRRIYG-IQEKQFRNYFRKADRKQGITGDNLLVLLERRLDNVVYRLGFASSRKEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173 VNH H +NG NI S + GD+IEV+Q S++ E Q A + PE++SV+ + Sbjct: 120 LVNHGHFFINGHKANIPSMLVRVGDIIEVRQSSRESNKFQEMKEQAAYKTPPEWLSVDAE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M T + P + ++ L+VE YSR Sbjct: 180 KMTGTVLAYPRREQ---IDTLVNEQLIVELYSR 209 >gi|332040528|gb|EGI76904.1| 30S ribosomal protein S4 [Hylemonella gracilis ATCC 19624] Length = 207 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 84/214 (39%), Positives = 130/214 (60%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S FGLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSISDKAKFDSK---PGQHGRISGARTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F++A + +G++ NL+S LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-ERQFRRYFEQASQRKGNSGANLLSLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG++VNI SY + GDVI V++KSK+ V+EA QLA++ P ++ VN Sbjct: 117 QLVSHKAITVNGQAVNIPSYMVQAGDVIAVREKSKKQNRVVEALQLAQQVGFPAWVEVNV 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D F + P + + + +L+VE YSR Sbjct: 177 DKAEGAFKKAPDRDE---FGSDINESLIVELYSR 207 >gi|224543759|ref|ZP_03684298.1| hypothetical protein CATMIT_02975 [Catenibacterium mitsuokai DSM 15897] gi|224523327|gb|EEF92432.1| hypothetical protein CATMIT_02975 [Catenibacterium mitsuokai DSM 15897] Length = 201 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 114/206 (55%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G ++ K +N R Y PG HGQ+R Y GLQL KQK++ Sbjct: 1 MARYTGPIWKKSRRLGFSVLENGKE-LNKRPYAPGQHGQKRHKSTEY-GLQLAEKQKVRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+EK+F + F A + G T N + LESRLD +VYR F T AARQ VNH H Sbjct: 59 MYG-INEKQFHNTFDRASKMEGVTGANFLFLLESRLDNVVYRMGFATTRRAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L+NG +I S R GDVI VK++S+QL + A + A+ P ++ V+ + F Sbjct: 118 ILLNGIKTDIPSCRVNPGDVITVKERSQQLDVIKTALE-AQTHTPGFVEVDAEKRTGKFT 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VE+Y+R Sbjct: 177 RLPERSE---LNQEINEQLIVEYYNR 199 >gi|119947102|ref|YP_944782.1| ribosomal protein S4 [Psychromonas ingrahamii 37] gi|152060920|sp|A1T0B8|RS4B_PSYIN RecName: Full=30S ribosomal protein S4 B gi|119865706|gb|ABM05183.1| SSU ribosomal protein S4P [Psychromonas ingrahamii 37] Length = 206 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGVHGA-RKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KE+ R +G+T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKESARLQGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ VLVNG+ VNI S+ K DVI +++K+K+ + + A ++A +R+VP ++SV+ M Sbjct: 119 SHKAVLVNGKVVNIPSFNVKASDVIAIREKAKKQSRIGAALEIAGQREVPTWVSVDATKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + L++E YS+ Sbjct: 179 EGIFTRQPERSD---LSAEINEQLIIELYSK 206 >gi|256821686|ref|YP_003145649.1| 30S ribosomal protein S4 [Kangiella koreensis DSM 16069] gi|256795225|gb|ACV25881.1| ribosomal protein S4 [Kangiella koreensis DSM 16069] Length = 206 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + + T+ PG HG R+S+ S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGVDLGHKSGVRAIETKCKIEVAPGQHGA-RRSRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEADR +G T NL+ LESRLD +VYR + T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEADRLKGATGVNLLQLLESRLDNVVYRMGYAATRGEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ +L+NG +VNI SY K DV+ V++KS++ A ++ A +L A+RD PE+I V+ M Sbjct: 119 SHKAILINGETVNIPSYTVKAEDVVSVREKSQKQARIVAALELAAQRDKPEWIEVDGKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + + NL+VE YS+ Sbjct: 179 EGQFKRVPERSE---LDASINENLIVELYSK 206 >gi|118444508|ref|YP_877226.1| 30S ribosomal protein S4 [Clostridium novyi NT] gi|152060917|sp|A0PXX4|RS4A_CLONN RecName: Full=30S ribosomal protein S4 A gi|118134964|gb|ABK62008.1| ribosomal protein S4 [Clostridium novyi NT] Length = 206 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HGQ RK +Y G+QLR Sbjct: 1 MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR +++A+ RG T NL+ LE RLD +VY+ F + ARQ Sbjct: 60 KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLKLLEMRLDNVVYKLGFGSSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY+ GDVI V++KS+ ++ + +P ++ N +N Sbjct: 119 LVTHGHFLVNGKKVDIISYQVSAGDVISVREKSRGTEKFKTFAENP-KTLPAWLEGNIEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ V + L+VE YS+ Sbjct: 178 FEGKVIAEPTRAD---IDVPVNETLIVELYSK 206 >gi|210623214|ref|ZP_03293653.1| hypothetical protein CLOHIR_01603 [Clostridium hiranonis DSM 13275] gi|210153751|gb|EEA84757.1| hypothetical protein CLOHIR_01603 [Clostridium hiranonis DSM 13275] Length = 207 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR G L+ + K ++ R+Y PG HGQ RK K S +G QLR Sbjct: 1 MARYTGASCRQCRREGMKLFLKGDRCYTDKCALDRRNYAPGQHGQGRK-KVSNYGEQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR++++ A++ G T NL+S LE RLD +VYR + ARQ Sbjct: 60 KQKVKRIYGVL-ETQFRNLYERAEKMPGKTGANLLSLLERRLDNVVYRMGLAASRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H +NG+ V+I S GDVI VK+ SK A + R P ++ N D Sbjct: 119 LVTHAHFTLNGKKVDIPSLTVNVGDVIAVKETSKSSAKFKALVENNTRIAPNWLENNLDE 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M A V +P+ + + +L++E YS+ Sbjct: 179 MCAKVVSLPTR---EDIDLEIAEHLIIELYSK 207 >gi|145219087|ref|YP_001129796.1| 30S ribosomal protein S4 [Prosthecochloris vibrioformis DSM 265] gi|189045392|sp|A4SCT5|RS4_PROVI RecName: Full=30S ribosomal protein S4 gi|145205251|gb|ABP36294.1| SSU ribosomal protein S4P [Chlorobium phaeovibrioides DSM 265] Length = 203 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R + PG HGQ R+SK S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGIALTPKAEKYMERRPFAPGQHGQGRRSKVSEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR+ +K+A RG T NL+ +E R D +V+RA F P+ +RQ V+H H Sbjct: 61 LYG-ILEKQFRNYYKKAVSQRGVTGDNLVRLIERRFDNVVFRAGFAPSRAGSRQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI SY GD+IE + KSK +++V +A + +P +I V+ N A F Sbjct: 120 LLVNGKKVNIPSYMVSPGDLIEFRPKSKNMSAVSDALSKTPDARIPSWIQVDKANQKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ LVVE YS+ Sbjct: 180 LAVPERVE---VQEPFNEQLVVELYSK 203 >gi|119713262|gb|ABL97328.1| ribosomal protein S4 [uncultured marine bacterium HF10_12C08] Length = 205 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 121/206 (58%), Positives = 155/206 (75%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+KR + KHKIDRR+ NLWGRPKSP N R Y PG HGQ+ K S +G+QL AKQK+K Sbjct: 1 MTKRVAQKHKIDRRLSVNLWGRPKSPFNLRKYRPGQHGQKHTGKLSDYGVQLNAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG+++E++FR+ +KEA R +GD+ NLI+ LE RLDTIVYR+KFVPT+FAARQF+NH H Sbjct: 61 YYGNLNERQFRNCYKEAIRQKGDSGENLIAILERRLDTIVYRSKFVPTVFAARQFINHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ VNI S KEGDV+EVK KSK++A V+E+ + ERD+P YI+V+ +TFV Sbjct: 121 VKVNGKRVNIASCLLKEGDVVEVKDKSKEMALVVESMKSQERDIPGYITVDEKKCSSTFV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P +VPY M P LV+E+YSR Sbjct: 181 RTPQ-FAEVPYATQMDPKLVIEYYSR 205 >gi|170016575|ref|YP_001727494.1| ribosomal protein S4 [Leuconostoc citreum KM20] gi|226699084|sp|B1MWZ8|RS4_LEUCK RecName: Full=30S ribosomal protein S4 gi|169803432|gb|ACA82050.1| Ribosomal protein S4 [Leuconostoc citreum KM20] Length = 203 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K +I RR+G +L G K ++ R+Y PG HG R++K S +G+QLR KQK++ Sbjct: 1 MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGMQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F +A + R T N + LE RLD++VYR F T ARQ VNH Sbjct: 60 TYG-LTERQFHALFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGFATTRQQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H++V+G+ V+I SY G V+ V+ KSK + + A + P+++S + + + + Sbjct: 119 HIMVDGKRVDIPSYNVTPGQVVSVRDKSKNIVPIQAAVESVVAR-PQFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + L+VE+Y+R Sbjct: 178 VRLPEREE---LDADLNEALIVEYYNR 201 >gi|88704352|ref|ZP_01102066.1| 30S ribosomal protein S4 [Congregibacter litoralis KT71] gi|88701403|gb|EAQ98508.1| 30S ribosomal protein S4 [Congregibacter litoralis KT71] Length = 206 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGVRSLESKCKPESVPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRIGFGSTRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 H+ +LVNG+ VNI SY+ K GDV+ +++K+K+ V A L A+R PE+I VN + + Sbjct: 119 AHKAILVNGKVVNIASYKVKAGDVVSLREKAKKQLRVQSAMALAAQRGEPEWIDVNVEKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A + P + + NL+VE YS+ Sbjct: 179 EAVYKAAPDRQELTS---EINENLIVELYSK 206 >gi|255536129|ref|YP_003096500.1| 30S ribosomal protein S4 [Flavobacteriaceae bacterium 3519-10] gi|255342325|gb|ACU08438.1| SSU ribosomal protein S4p (S9e) [Flavobacteriaceae bacterium 3519-10] Length = 202 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG--QRRKSKPSYFGLQLRAKQKM 58 M++ K KI R+ G ++G K+ ++ PG HG +RR SK S + +QL KQK Sbjct: 1 MARYIGPKTKIARKFGAAIYGDDKNFEKRKNQPPGQHGVNKRRGSKKSEYAVQLMEKQKA 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I E++F +++++A R++G T L+ ESRLD +VYR F T ARQ V+H Sbjct: 61 KYTYG-ILERQFANLYEKAQRAKGVTGEVLLQLCESRLDNVVYRLGFGKTRAGARQLVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 RHV VNG VNI SY K GDVI +++KSK L + A LA + E++ N + T Sbjct: 120 RHVTVNGELVNIPSYLLKAGDVIAIREKSKSLEVI--ADSLAGKANYEWLQFNDEKKEGT 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FV P + P ++ L+VE YS+ Sbjct: 178 FVSAPER---IQIPEDIKEQLIVELYSK 202 >gi|164686553|ref|ZP_02210581.1| hypothetical protein CLOBAR_00120 [Clostridium bartlettii DSM 16795] gi|164604422|gb|EDQ97887.1| hypothetical protein CLOBAR_00120 [Clostridium bartlettii DSM 16795] Length = 206 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR G L+ + K + R+Y PG HGQ RK +Y GLQLR Sbjct: 1 MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRKKLSNY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR++++ A++ G T NL+ LE RLD +V+R + ARQ Sbjct: 60 KQKVKRIYGVL-ETQFRNLYERAEKMSGKTGENLLCLLEERLDNVVFRMGLANSRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H +NG+ V+I S K GDVI VK+ SK A + A + P ++ VN + Sbjct: 119 LVTHAHFTLNGKKVDIPSLTVKVGDVIAVKETSKSSAKFKALVE-ANKVAPNWLDVNLEE 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M A V +P+ + + +L++E YS+ Sbjct: 178 MSAKVVALPTR---EDIDIEIAEHLIIELYSK 206 >gi|307823465|ref|ZP_07653694.1| ribosomal protein S4 [Methylobacter tundripaludum SV96] gi|307735450|gb|EFO06298.1| ribosomal protein S4 [Methylobacter tundripaludum SV96] Length = 206 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + + + + PG HG ++++ S + +QLRAKQ Sbjct: 1 MARYLGPTCKLSRREGTDLFLKSRGKSLENKCKLDQRPGQHG-TKRARSSDYAIQLRAKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 ++++ YG I EK+FR+ +K AD +G T NL++ LESRLD +VYR F T ARQ V Sbjct: 60 RLRRIYG-ILEKQFRNYYKTADLKKGATGQNLLNLLESRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ + VN +N+ SY+ GDV+ V++K+K+ +++A + E+ P ++ VN +M Sbjct: 119 SHKSIQVNNVLINVPSYQVSPGDVLTVREKAKKQQRIVDALVVTEQYGFPSWVEVNSKSM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P V + LVVE YS+ Sbjct: 179 SGTFSSLPDR---VDLGSDINEQLVVELYSK 206 >gi|206900118|ref|YP_002250727.1| ribosomal protein S4 [Dictyoglomus thermophilum H-6-12] gi|226732178|sp|B5YDW9|RS4_DICT6 RecName: Full=30S ribosomal protein S4 gi|206739221|gb|ACI18279.1| ribosomal protein S4 [Dictyoglomus thermophilum H-6-12] Length = 206 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 14/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K P R + PG HG+ ++ Y GL+LR Sbjct: 1 MARYTGPDCRLCRREGMKLFLKGTKCFSEKCPFERRPFAPGQHGRAQRKLTEY-GLRLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ+ K+ YG + E++FR F+ A + RG T L+ LE+RLD +VYR + + ARQ Sbjct: 60 KQRAKRIYGVL-ERQFRRYFEIASKGRGVTGERLLQLLETRLDNVVYRLGWALSRDQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H + VNG+ VNI SY K GDV+E+ K L V EA ++VP ++ ++ + Sbjct: 119 LVSHGKIAVNGKRVNIPSYNLKPGDVVELLD--KDLIPVQEAISVFGNKNVPAWLELDRE 176 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +R+P + +Q L+VEFYSR Sbjct: 177 NFRGRVLRLPKREE---IDTPVQEQLIVEFYSR 206 >gi|219666517|ref|YP_002456952.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense DCB-2] gi|254764585|sp|B8G1Z3|RS4_DESHD RecName: Full=30S ribosomal protein S4 gi|219536777|gb|ACL18516.1| ribosomal protein S4 [Desulfitobacterium hafniense DCB-2] Length = 208 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K ++ R+Y PG HGQ R KP+ +G+QLR Sbjct: 1 MARYTGPVCRLCRREGMKLFLKGDRCYTGKCAIDRRAYAPGQHGQSRGKKPTEYGIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+FRS + +A+R +G NL+ LE RLD +V++ F + ARQ Sbjct: 61 KQKVRRIYG-VQEKQFRSYYDKANRQKGIVGENLLRLLERRLDNVVFQLGFATSRPEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H +NGR V+I S+ + GDV+ VK+ SK + E +R P+++S++ + Sbjct: 120 LVRHGHFTINGRRVDIPSFLVRVGDVVGVKEASKSSPRLKEILSSLDRTPPKWMSLDANA 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T + +P +D+ P +Q +L+VE YSR Sbjct: 180 ATGTIIALPDR-EDIQLP--IQEHLIVEKYSR 208 >gi|146297258|ref|YP_001181029.1| ribosomal protein S4 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|172046028|sp|A4XLQ3|RS4_CALS8 RecName: Full=30S ribosomal protein S4 gi|145410834|gb|ABP67838.1| SSU ribosomal protein S4P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 208 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MSK ++ RR G L+ + K R Y PG HGQ RK Y G+QLR Sbjct: 1 MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFAKRPYPPGQHGQERKKLSEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H H VNG++VNI SY GDVIEVK+KSK +E + A+R P+++ + + Sbjct: 119 LVSHAHFKVNGKTVNIPSYLVDVGDVIEVKEKSKSKPRFIEIKEKYAKRPSPKWLEKDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V + +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGKVIALPTR-EDIDMP--IKEHLIVELYSK 208 >gi|294789218|ref|ZP_06754457.1| ribosomal protein S4 [Simonsiella muelleri ATCC 29453] gi|294482959|gb|EFG30647.1| ribosomal protein S4 [Simonsiella muelleri ATCC 29453] Length = 206 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + + ++ PG HG +KS+ S +GLQLR KQ Sbjct: 1 MARYLGPKCKLARREGTDLYLKSARRSLESKCKMESAPGQHGA-KKSRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR F EADR +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG+ VNI S++ K GDV+ V++K+K+ + EA L A+ +P ++SV+ + M Sbjct: 119 SHKALTVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALGLAAQIGMPSWVSVDANKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + + LVVEFYS+ Sbjct: 179 EGTFKNVPDRAELYS---DINEQLVVEFYSK 206 >gi|73662353|ref|YP_301134.1| 30S ribosomal protein S4 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581622|sp|Q49YF2|RS4_STAS1 RecName: Full=30S ribosomal protein S4 gi|72494868|dbj|BAE18189.1| 30S ribosomal protein S4 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 200 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG ++ K S + LQLR KQK++ Sbjct: 1 MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYALQLREKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR+ F+ A G N + L +RLD +VY T ARQ VNH H Sbjct: 60 LYG-MTERQFRNTFEIAGNQHGVHGENFMQLLAARLDAVVYSLGLARTRRQARQIVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY K G I V++KS +L + E+ ++ VP+Y+ + DN+ ++ Sbjct: 119 IEVDGKRVDIPSYTLKPGQEISVREKSLKLDIIAESVEI-NNFVPDYLEFDADNLKGKYI 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RVPERSE---LPAEINEQLIVEYYSR 200 >gi|261405769|ref|YP_003242010.1| 30S ribosomal protein S4 [Paenibacillus sp. Y412MC10] gi|329922609|ref|ZP_08278161.1| ribosomal protein S4 [Paenibacillus sp. HGF5] gi|261282232|gb|ACX64203.1| ribosomal protein S4 [Paenibacillus sp. Y412MC10] gi|328941951|gb|EGG38234.1| ribosomal protein S4 [Paenibacillus sp. HGF5] Length = 200 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR+G +L G K + R + PG HG ++ K S +G+QL+ KQK++ Sbjct: 1 MARYTGPKFKLSRRLGISLSGTGKE-LAKRPFPPGQHGPNQRRKVSNYGMQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F +A +G N + LESRLD +VYR F + ARQ V H H Sbjct: 60 MYG-LGEKQFRTLFNKATSMKGIAGENFMFLLESRLDNLVYRLGFSNSRAGARQLVAHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SY GDVI ++++S+ L+S+ EA +P Y+ + M ++ Sbjct: 119 VTVNGKKVDIASYAVSTGDVIGLRERSRSLSSIKEALA-NRVHLPAYLEFDEAAMEGKYI 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFY+R Sbjct: 178 RLPERSE---LSQDIDEKQIVEFYNR 200 >gi|288906416|ref|YP_003431638.1| Ribosomal protein S4 [Streptococcus gallolyticus UCN34] gi|306832453|ref|ZP_07465605.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979478|ref|YP_004289194.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733142|emb|CBI14723.1| Ribosomal protein S4 [Streptococcus gallolyticus UCN34] gi|304425353|gb|EFM28473.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179406|emb|CBZ49450.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 203 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G T N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKIKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGHPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VE+Y++ Sbjct: 178 TRLPERDE---INPEINEALIVEYYNK 201 >gi|74316447|ref|YP_314187.1| 30S ribosomal protein S4 [Thiobacillus denitrificans ATCC 25259] gi|90101734|sp|Q3SLM5|RS4_THIDA RecName: Full=30S ribosomal protein S4 gi|74055942|gb|AAZ96382.1| ribosomal protein S4 [Thiobacillus denitrificans ATCC 25259] Length = 209 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R+Y PG HGQ+ ++ S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQKSGARLSGYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR +K AD +G T NL+S LESRLD++ YR F + ARQ Sbjct: 61 KQKIRRIYGVL-EGQFRLTYKRADSRKGVTGENLLSMLESRLDSVCYRMGFGASRTEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H ++VNGR VNI SY+ + GDV+EV +KSK + A+ A R PE+I V+ Sbjct: 120 IVRHNGIVVNGRRVNIPSYQVRPGDVVEVAEKSKAQLRIKAAADATATRGYPEWIEVDAK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T+ P + P + +LVVE YS+ Sbjct: 180 ALKGTYKAHPQRSE---LPSTINESLVVELYSK 209 >gi|27262234|gb|AAN87398.1| SSU ribosomal protein S4 [Heliobacillus mobilis] Length = 208 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K V+ R+Y PG HGQ RK Y GLQLR Sbjct: 1 MARYTGPVCRLCRREGAKLYLKGDRCYTGKCAVDRRTYAPGQHGQGRKKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR+ F +ADR +G T HNL+ LE RLD +V+R F + ARQ Sbjct: 60 KQKARRIYG-ILEGQFRTYFSKADRQQGITGHNLLRLLERRLDNVVFRLGFARSRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 FV H H +NG VNI S + + GDVI++K+KSK E + L ++ P ++ ++ + Sbjct: 119 FVLHNHFTLNGHKVNIASIQLRVGDVIQLKEKSKDTPLFKEIVASLGQKTPPAWLELDVN 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ V +P+ +Q +L+VE YSR Sbjct: 179 NLSGRVVALPNR---EDIDTTVQEHLIVELYSR 208 >gi|227538693|ref|ZP_03968742.1| ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33300] gi|227241612|gb|EEI91627.1| ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33300] Length = 202 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ E ++G K + ++Y PG HG +R+ K S + +QL KQK K Sbjct: 1 MARYTGPKSKIARKFREPIFGPDK-ALEKKNYPPGQHGPSKRRGKQSEYAIQLLEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++F ++F +A +G T N + LE+RLD VYR PT AARQ V+H+ Sbjct: 60 YTYGVL-ERQFSNLFVKAAAKQGITGENFLKLLEARLDNTVYRLGIAPTRAAARQLVSHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY + GDVI V+++S+ L +V + + + + ++ N + TF Sbjct: 119 HITVNGGVVNIPSYSLRPGDVIAVRERSQSLEAVTTSVEGRKINKFAWLEWNANEFKGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P P ++ NL+VE YS+ Sbjct: 179 LSYPERTD---IPENIKENLIVELYSK 202 >gi|325280942|ref|YP_004253484.1| ribosomal protein S4 [Odoribacter splanchnicus DSM 20712] gi|324312751|gb|ADY33304.1| ribosomal protein S4 [Odoribacter splanchnicus DSM 20712] Length = 202 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G K + R+Y G HG RR+ K S +G+QL+ KQK K Sbjct: 1 MARYTGPKSKIARKFGEPIYGPDK-ALERRNYPSGQHGLARRRRKISEYGVQLKEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR +F++A+R+ G T L+ LE RLD +VYR PT AARQ V+HR Sbjct: 60 YTYG-LLEKQFRILFEKAERAGGVTGEVLLQMLECRLDNVVYRLGIAPTRAAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG NI S K GDV+ V++KSK L V ++ + ++ + +M Sbjct: 119 HITVNGGVCNIPSAAVKAGDVVAVREKSKALEVVADSLRSNRVSKYSWLEWDGASMSGKL 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P P ++ L+VE YS+ Sbjct: 179 LNVPERSD---IPENIKEQLIVELYSK 202 >gi|237749539|ref|ZP_04580019.1| small subunit ribosomal protein S4 [Oxalobacter formigenes OXCC13] gi|229380901|gb|EEO30992.1| small subunit ribosomal protein S4 [Oxalobacter formigenes OXCC13] Length = 207 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 129/211 (61%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG + ++ S +G QLR KQ Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDTKPGQHGAKSGARTSDYGNQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG I E++FR F EA+R +G+T NL+ LESRLD +VYR F T +RQ V Sbjct: 61 KVKRMYG-ILERQFRRYFAEAERRKGNTGDNLMQLLESRLDNVVYRMGFGSTRAESRQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI SY K DVI +++KSK+ ++E+ LAE+ + +++SV+ M Sbjct: 120 SHQALMVNGKVVNIPSYLVKPEDVITIREKSKKQNRIVESLSLAEQIGMADWVSVDSKKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + + + +L++E YSR Sbjct: 180 EGVFKRIPDRSE---FANDVNESLIIELYSR 207 >gi|187476573|ref|YP_784597.1| 30S ribosomal protein S4 [Bordetella avium 197N] gi|123515214|sp|Q2L242|RS4_BORA1 RecName: Full=30S ribosomal protein S4 gi|115421159|emb|CAJ47643.1| 30S ribosomal protein S4 [Bordetella avium 197N] Length = 207 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 122/211 (57%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +GLQLR KQ Sbjct: 1 MARYTGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T ARQ V Sbjct: 61 KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR + +NG + +I S K GDVI V++ +K+ A + E+ LA +P+++ V+ + M Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVITVREGAKKQARIRESLDLAASIGIPQWVEVDSNKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + ++VVE YSR Sbjct: 180 TGTFKSPPDRAD---VARDVNESMVVELYSR 207 >gi|125975412|ref|YP_001039322.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405] gi|256005301|ref|ZP_05430267.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360] gi|281419374|ref|ZP_06250389.1| ribosomal protein S4 [Clostridium thermocellum JW20] gi|152060944|sp|A3DJK0|RS4_CLOTH RecName: Full=30S ribosomal protein S4 gi|125715637|gb|ABN54129.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405] gi|255990737|gb|EEU00853.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360] gi|281406994|gb|EFB37257.1| ribosomal protein S4 [Clostridium thermocellum JW20] gi|316939528|gb|ADU73562.1| ribosomal protein S4 [Clostridium thermocellum DSM 1313] Length = 208 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR GE L+ + K + R Y PG HGQ +K Y GLQLR Sbjct: 1 MARYTGASCRLCRREGEKLYLKGERCTTNKCAIARRGYAPGQHGQNKKKLSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++YYG I E +FR F+ A + +G T NL+ LESRLD +VYR + ARQ Sbjct: 60 KQKARRYYG-ILEGQFRRYFEMAVKKKGITGENLLQILESRLDNVVYRMGLAVSRREARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H VNG+ V+I SY K GDVI VK+KSK + + A R P+++ + + Sbjct: 119 LVRHGHFTVNGKRVDIPSYLVKVGDVIAVKEKSKSSPKMQSNKEYAAGRPRPKWLEYDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M V +P+ +D+ P ++ NL+VE YS+ Sbjct: 179 EMSGKVVALPAR-EDIDLP--IRENLIVELYSK 208 >gi|296111082|ref|YP_003621463.1| 30S ribosomal protein S4 [Leuconostoc kimchii IMSNU 11154] gi|295832613|gb|ADG40494.1| 30S ribosomal protein S4 [Leuconostoc kimchii IMSNU 11154] Length = 203 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K +I RR+G +L G K ++ R+Y PG HG R++K S +G QLR KQK++ Sbjct: 1 MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKVSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F S+F +A + R T N + LE RLD++VYR T ARQ VNH Sbjct: 60 TYG-LTERQFHSLFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGLATTRQQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I S+ G VI V+ KSK + + A + P+++S + + + + Sbjct: 119 HILVDGKRVDIPSFSVTPGQVISVRDKSKTIVPIQVAVESVVAH-PQFVSFDSEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + L+VE+Y+R Sbjct: 178 VRLPEREE---LDADINEALIVEYYNR 201 >gi|90962052|ref|YP_535968.1| 30S ribosomal protein S4 [Lactobacillus salivarius UCC118] gi|301300890|ref|ZP_07207062.1| ribosomal protein S4 [Lactobacillus salivarius ACS-116-V-Col5a] gi|122448841|sp|Q1WT66|RS4_LACS1 RecName: Full=30S ribosomal protein S4 gi|90821246|gb|ABD99885.1| SSU ribosomal protein S4P [Lactobacillus salivarius UCC118] gi|300214749|gb|ADJ79165.1| 30S ribosomal protein S4 [Lactobacillus salivarius CECT 5713] gi|300851489|gb|EFK79201.1| ribosomal protein S4 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 201 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K ++ R Y PG HGQ R+ S +GLQLR KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGFSLSGTGKE-LSRRPYAPGQHGQDRRGSLSEYGLQLREKQKLRM 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++FK A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 TYG-LTERQFSNLFKRAGKIREGKHGDNFMILLERRLDNVVYRLGLASTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI ++++SK L V EA + VP +++ + + M T Sbjct: 119 HITVDGKRVDIPSYEVEPGQVISLRERSKDLQIVKEALEAVVGRVP-FVNFDENKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + LVVEFY+R Sbjct: 178 VRLPDREE---LDANIDEALVVEFYNR 201 >gi|116491377|ref|YP_810921.1| SSU ribosomal protein S4P [Oenococcus oeni PSU-1] gi|116092102|gb|ABJ57256.1| SSU ribosomal protein S4P [Oenococcus oeni PSU-1] Length = 262 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ K ++ RR+G +L G K + R Y PG HG R+ K S + QLR KQK++ Sbjct: 59 MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 117 Query: 60 KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +SE++F ++F +A + +G N LE+RLD++V+R T ARQ VNH Sbjct: 118 FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 176 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+LV+G+ V I SY K G +I V+++SK++ +L + + + + P ++ + D + Sbjct: 177 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 235 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + +L+VE+Y+R Sbjct: 236 LTRYPEREE---LGADINESLIVEYYNR 260 >gi|227891072|ref|ZP_04008877.1| 30S ribosomal protein S4 [Lactobacillus salivarius ATCC 11741] gi|227866946|gb|EEJ74367.1| 30S ribosomal protein S4 [Lactobacillus salivarius ATCC 11741] Length = 201 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K ++ R Y PG HGQ R+ S +GLQLR KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGFSLSGTGKE-LSRRPYAPGQHGQDRRGSLSEYGLQLREKQKLRM 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++FK A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 TYG-LTERQFSNLFKRAGKIREGKHGDNFMILLERRLDNVVYRLGLASTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI ++++SK L V EA + VP +++ + + M T Sbjct: 119 HITVDGKRVDIPSYEVEPGQVISLRERSKDLQIVKEALEAVVSRVP-FVNFDENKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + LVVEFY+R Sbjct: 178 VRLPDREE---LDANIDEALVVEFYNR 201 >gi|110833282|ref|YP_692141.1| 30S ribosomal protein S4 [Alcanivorax borkumensis SK2] gi|123149715|sp|Q0VSH9|RS4_ALCBS RecName: Full=30S ribosomal protein S4 gi|110646393|emb|CAL15869.1| 30S ribosomal protein S4 [Alcanivorax borkumensis SK2] Length = 210 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 12/214 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQ------RRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + P+ ++ GQ RR ++ S +G+QLR Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGIRPLESKCKADQAPGQAAGASGRRPARLSDYGVQLR 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+++ YG + EK+FRS +K+A S+G T L+ LE RLD +VYR F T AR Sbjct: 61 EKQKVRRTYGVL-EKQFRSYYKKAAASKGATGEVLLQLLEGRLDNVVYRMGFGSTRSEAR 119 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNH 172 Q V+HR +LVNG+SVN+ SY+ K GD I V++KSK V A +LA +R +I V+ Sbjct: 120 QLVSHRAILVNGQSVNVASYQVKPGDQINVREKSKNQLRVKNAMELAQQRGFMPWIEVDD 179 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T+ P + P + NL+VE YS+ Sbjct: 180 KKLEGTYKAKPER---IDLPAEINENLIVELYSK 210 >gi|300775038|ref|ZP_07084901.1| 30S ribosomal protein S4 [Chryseobacterium gleum ATCC 35910] gi|300506853|gb|EFK37988.1| 30S ribosomal protein S4 [Chryseobacterium gleum ATCC 35910] Length = 202 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 86/208 (41%), Positives = 119/208 (57%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQKM 58 M++ K KI R+ G ++G K+ ++ PG HG RR +K S + +QL KQK Sbjct: 1 MARYIGPKTKIARKFGAAIYGDDKNFEKRKNQPPGQHGPNKRRGAKKSEYAVQLAEKQKA 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I E++F ++F +A RS+G T L+ ESRLD +VYR F T AARQ V+H Sbjct: 61 KYTYG-ILERQFANLFDKAHRSKGVTGEVLLQLCESRLDNVVYRFGFAKTRSAARQLVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 RH+ VNG +NI SY K GDVI V++KSK L V A LA + E++ N + T Sbjct: 120 RHITVNGEILNIPSYLVKAGDVIAVREKSKSLEVVTNA--LASKSNYEWLQFNDEKKEGT 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FV P + P ++ NL+VE YS+ Sbjct: 178 FVSAPER---IQIPEDIKENLIVELYSK 202 >gi|319955881|ref|YP_004167144.1| SSU ribosomal protein s4p [Nitratifractor salsuginis DSM 16511] gi|319418285|gb|ADV45395.1| SSU ribosomal protein S4P [Nitratifractor salsuginis DSM 16511] Length = 208 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K++RR+G +L + KS + R Y PG HGQ R++K S +GLQLR Sbjct: 1 MARYRGPREKLERRLGVDLGLKGERRLAGKSALEKRPYPPGQHGQ-RRTKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FRSIF+EA+R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRSIFQEANRLEGNTGELLIQLLEQRLDNVVYRMGFATTRAFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 VNH HVLV+G+ V+I SYR K G IE+++KSK + + +L + + E++ V+ + Sbjct: 119 LVNHGHVLVDGKRVDIPSYRVKPGQKIEIREKSKNNPQIQRSVELTNQTGIVEWVDVDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F RIP + + ++ L+VE YS+ Sbjct: 179 KLFGIFTRIPEREE---ISIPVEERLIVELYSK 208 >gi|209524168|ref|ZP_03272718.1| ribosomal protein S4 [Arthrospira maxima CS-328] gi|209495259|gb|EDZ95564.1| ribosomal protein S4 [Arthrospira maxima CS-328] Length = 202 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+G+ K+ R+Y PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVARRLGDLPGLTRKTA--RRAYPPGQHGQARRKRSEY-AVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ ++A R+ G T L+ +LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-LSERQLLRYVRKARRASGSTGQVLLQYLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNG+ V+I SY+C+ G+ I V+ + K V Q +VP ++ ++ +N+ AT Sbjct: 117 ITVNGKVVDIASYQCRPGETIGVRNRDKSREMVKANLQYPGLANVPSHLELDKNNLTATV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIER---EWVALSINELLVVEYYSR 200 >gi|77461277|ref|YP_350784.1| 30S ribosomal protein S4 [Pseudomonas fluorescens Pf0-1] gi|90101709|sp|Q3K611|RS4_PSEPF RecName: Full=30S ribosomal protein S4 gi|77385280|gb|ABA76793.1| 30S ribosomal protein S4 [Pseudomonas fluorescens Pf0-1] Length = 206 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQRR + Y G QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +K A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VN+ SY+ + GDV+ V++K+K +++A +L A+R E++ V+ + Sbjct: 119 SHKSISVNGQTVNVPSYQVRAGDVVAVREKAKNQLRIVQALELCAQRGRVEWVEVDAEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206 >gi|237747389|ref|ZP_04577869.1| small subunit ribosomal protein S4 [Oxalobacter formigenes HOxBLS] gi|229378740|gb|EEO28831.1| small subunit ribosomal protein S4 [Oxalobacter formigenes HOxBLS] Length = 207 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 129/211 (61%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG + ++ S +G QLR KQ Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDVKPGQHGMKSGARTSDYGNQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG I EK+FR F EA+R +G+T NL+ LESRLD +VYR F T +RQ V Sbjct: 61 KVKRMYG-ILEKQFRRYFAEAERRKGNTGDNLMQLLESRLDNVVYRMGFGSTRAESRQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +H+ ++VNG+ VNI SY K DVI +++K+K+ ++E+ LAE+ + +++SV+ M Sbjct: 120 SHQALMVNGKVVNIPSYLVKPEDVITIREKAKKQNRIVESLSLAEQIGLADWVSVDSKKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + + + +L++E YSR Sbjct: 180 EGVFKRVPDRSE---FANDVNESLIIELYSR 207 >gi|251797775|ref|YP_003012506.1| ribosomal protein S4 [Paenibacillus sp. JDR-2] gi|247545401|gb|ACT02420.1| ribosomal protein S4 [Paenibacillus sp. JDR-2] Length = 199 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K K+ RR+G +L G K R + PG HG ++ K S +G+QL+ KQK++ Sbjct: 1 MSRYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGPNQRKKLSGYGVQLQEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+FR++F +A + +G + N + LESRLD +V+R F + ARQ V+H H Sbjct: 59 MYG-LNEKQFRNLFDKAAKLKGISGENFMVLLESRLDNLVFRLGFANSRAGARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SY GDVI ++++S+ L S+ EA + +P YI N + +V Sbjct: 118 VTVNGKKVDIASYTVSTGDVIGLRERSRGLKSIKEAIE-GRHHLPNYIEFNDAAVEGKYV 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 177 RLPERAE---LSQEIDEKQIVEFYSR 199 >gi|189347677|ref|YP_001944206.1| 30S ribosomal protein S4 [Chlorobium limicola DSM 245] gi|226697820|sp|B3EGW4|RS4_CHLL2 RecName: Full=30S ribosomal protein S4 gi|189341824|gb|ACD91227.1| ribosomal protein S4 [Chlorobium limicola DSM 245] Length = 203 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 124/207 (59%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R + PG HGQ RK K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGVALSPKAEKYLERRPFAPGQHGQSRKGKVSEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR+ +K+A RG T NL+ LE RLD +V+R+ F + ARQ V+H H Sbjct: 61 LYG-ILEKQFRNYYKKAVAQRGVTGDNLVKLLERRLDNVVFRSGFSASRAGARQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 ++VNG+ VNI S++ GD+IE +Q+S+ + +V ++ A E P +I V+ N A F Sbjct: 120 LVVNGKKVNIPSFQVSPGDLIEFRQRSRNMGAVTDSLSKAPESRFPSWIQVDKANQKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +D+ P LVVE YS+ Sbjct: 180 LSVPER-EDIQEP--FNEQLVVELYSK 203 >gi|126662239|ref|ZP_01733238.1| 30S ribosomal protein S4 [Flavobacteria bacterium BAL38] gi|126625618|gb|EAZ96307.1| 30S ribosomal protein S4 [Flavobacteria bacterium BAL38] Length = 201 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G K R+Y PG HG +++ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGEDK-AFEKRNYPPGQHGLAKKRGKKSEYAVQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR++FK+A + G T L+ E+RLD +VYR P+ AARQ V+HR Sbjct: 60 YTYG-ILEKQFRNLFKKASAASGVTGEILLQLCEARLDNVVYRMGVAPSRRAARQIVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VN+ SY K GD + V++KSK L ++ + + + V E+I+ N+D TF Sbjct: 119 HITVNGELVNVPSYHLKAGDKVAVREKSKSLEAIERSLASSSQ-VYEWITWNNDTKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P L+ P ++ L+VE Y++ Sbjct: 178 VSVPQRLQ---IPENIKEQLIVELYNK 201 >gi|320547679|ref|ZP_08041964.1| 30S ribosomal protein S4 [Streptococcus equinus ATCC 9812] gi|320447754|gb|EFW88512.1| 30S ribosomal protein S4 [Streptococcus equinus ATCC 9812] Length = 203 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G T N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VE+Y++ Sbjct: 178 TRLPERDE---INPEINEALIVEYYNK 201 >gi|256830514|ref|YP_003159242.1| ribosomal protein S4 [Desulfomicrobium baculatum DSM 4028] gi|256579690|gb|ACU90826.1| ribosomal protein S4 [Desulfomicrobium baculatum DSM 4028] Length = 208 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K +I RR G L+ + K R+Y PG HG+ RK KPS + LQLR Sbjct: 1 MARYTGPKCRICRREGGKLFLKGDRCYTDKCAFERRAYAPGDHGKARK-KPSDYALQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++K YG I E +FR F+EA+R +G T NL+ LE+R+D + Y+ F + ARQ Sbjct: 60 KQKVRKMYG-ILEGQFRRYFEEAERRKGITGTNLLMLLETRIDNVAYKLGFANSRSQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NGR VN+ S + K GDV+EV+ ++K+ + EA + +A R VP ++ ++ Sbjct: 119 MVRHGLFSLNGRRVNVPSIQMKSGDVLEVRDRTKKNLVITEALEVVARRGVPAWLEIDAP 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ +D+ +P M L+VE YS+ Sbjct: 179 AFKGSVKALPTR-EDITFP--MTEQLIVELYSK 208 >gi|319938287|ref|ZP_08012684.1| 30S ribosomal protein S4 [Coprobacillus sp. 29_1] gi|319806580|gb|EFW03238.1| 30S ribosomal protein S4 [Coprobacillus sp. 29_1] Length = 201 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K RR+G + K ++ R Y PG HGQ+RK KP+ +GLQL KQK++ Sbjct: 1 MARYTGPQWKKSRRLGFSTLETGKE-LSKRPYAPGQHGQKRK-KPTEYGLQLAEKQKVRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+FR+ F A + G T +N LE+RLD +VYR F T ARQ VNH H Sbjct: 59 MYG-VNEKQFRNTFFRASKMDGITGYNFFCLLETRLDNVVYRLGFATTRRQARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L+NG +I S + K GDV+ VK+KSK L + + ++ VP ++ V+ D M F+ Sbjct: 118 ILLNGVKTDIASCQVKVGDVVAVKEKSKSLEIIKTSLA-SQNHVPGFVEVDADKMEGKFI 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +L+VE+Y+R Sbjct: 177 RLPERSE---LNQEINESLIVEYYNR 199 >gi|284049864|ref|ZP_06380074.1| 30S ribosomal protein S4 [Arthrospira platensis str. Paraca] gi|291571495|dbj|BAI93767.1| 30S ribosomal protein S4 [Arthrospira platensis NIES-39] Length = 202 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+G+ K+ R+Y PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVARRLGDLPGLTRKTA--RRAYPPGQHGQARRKRSEY-AVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ ++A R+ G T L+ +LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-LSERQLLRYVRKARRASGSTGQVLLQYLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNG+ V+I SY+C+ G++I V+ + K V Q +VP ++ ++ +N+ AT Sbjct: 117 ITVNGKVVDIASYQCRPGEIIGVRNRDKSREMVKANLQYPGLANVPSHLELDKNNLTATV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIER---EWVALSINELLVVEYYSR 200 >gi|296875556|ref|ZP_06899628.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 15912] gi|312866896|ref|ZP_07727109.1| ribosomal protein S4 [Streptococcus parasanguinis F0405] gi|296433480|gb|EFH19255.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 15912] gi|311097679|gb|EFQ55910.1| ribosomal protein S4 [Streptococcus parasanguinis F0405] Length = 203 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKVKEGTVGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + D + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATVGRPAFVSFDADKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|167752411|ref|ZP_02424538.1| hypothetical protein ALIPUT_00655 [Alistipes putredinis DSM 17216] gi|167660652|gb|EDS04782.1| hypothetical protein ALIPUT_00655 [Alistipes putredinis DSM 17216] Length = 202 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M + K KI R+ GE ++G + + R++ PG HG R++ K S +G QL KQK K Sbjct: 1 MGRYIGPKSKIARKFGEAIFGADR-VLEKRNFPPGQHGLARKRKKVSEYGQQLSEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+F +++A R G T NL+ LE RLD +VYR PT AARQ V+H Sbjct: 60 ATYG-LLEKQFSRTYEQAARMGGITGENLLKLLECRLDNVVYRLGIAPTRAAARQLVSHC 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GD++ V++KSK L ++ + + ++ + M F Sbjct: 119 HICVNGNVVNIPSYSLKVGDIVSVREKSKSLEVIVGSLAGGSKSRYAWLEWDGAAMAGKF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P + P ++ L+VE YS+ Sbjct: 179 LQRPEREE---IPENIKEQLIVELYSK 202 >gi|332107892|gb|EGJ09116.1| 30S ribosomal protein S4 [Rubrivivax benzoatilyticus JA2] Length = 207 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ S+ S +G+QLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIGDKAKFDSK---PGQHGRTSGSRTSDYGVQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EA+R +G+T NL++ LESRLD +VYR F T +R Sbjct: 58 EKQKVKRMYGVL-ERQFRRYFAEAERRKGNTGSNLLALLESRLDNVVYRMGFGSTRAESR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG+ VNI SY K GDV+ V++K+K V +A +LA+ E++ V+ Sbjct: 117 QLVSHKAITVNGQVVNIPSYMVKAGDVVAVREKAKNQLRVQDALKLAQTIGQCEWVQVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F ++P + + ++ L+VE YSR Sbjct: 177 TKMEGVFKKVPDRDQ---FGAEIKEALIVELYSR 207 >gi|311109577|ref|YP_003982430.1| 30S ribosomal protein S4 [Achromobacter xylosoxidans A8] gi|310764266|gb|ADP19715.1| ribosomal protein S4 [Achromobacter xylosoxidans A8] Length = 207 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T ARQ V Sbjct: 61 KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR + +NG + +I S K GDV+ +++K+K+ + E+ LA +P+++ V+ + Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVVSIREKAKKQGRIKESLDLATSIGIPQWVEVDTTKL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + ++VVE YSR Sbjct: 180 TGTFKSAPDRAD---VARDINESMVVELYSR 207 >gi|146298136|ref|YP_001192727.1| 30S ribosomal protein S4 [Flavobacterium johnsoniae UW101] gi|189045380|sp|A5FN16|RS4_FLAJO RecName: Full=30S ribosomal protein S4 gi|146152554|gb|ABQ03408.1| 30S ribosomal protein S4 [Flavobacterium johnsoniae UW101] Length = 201 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ GE ++G KS R+Y PG HG +++ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGMAKKRGKKSEYAVQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR++F++A ++G T L+ E+RLD +V+R P+ ARQ V+HR Sbjct: 60 YSYG-ILEKQFRNLFEKASATKGVTGEVLLQLCEARLDNVVFRMGIAPSRRGARQIVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GD + V++KSK L ++ + + V E+I+ N+D TF Sbjct: 119 HITVNGEVVNIPSYHLKPGDKVAVREKSKSLEAIERSLSNSSH-VYEWITWNNDLKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P+ L+ P ++ L+VE Y++ Sbjct: 178 VSVPARLQ---IPENIKEQLIVELYNK 201 >gi|317401573|gb|EFV82202.1| 30S ribosomal protein S4 [Achromobacter xylosoxidans C54] Length = 207 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T ARQ V Sbjct: 61 KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR + +NG + +I S K GDVI +++K+K+ + E+ LA +P+++ V+ + Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVISIREKAKKQGRIKESLDLATSIGIPQWVEVDTTKL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + ++VVE YSR Sbjct: 180 TGTFKSAPDRAD---VARDINESMVVELYSR 207 >gi|307543849|ref|YP_003896328.1| 30S ribosomal protein S4 [Halomonas elongata DSM 2581] gi|307215873|emb|CBV41143.1| 30S ribosomal protein S4 [Halomonas elongata DSM 2581] Length = 206 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + +P + PG+HGQRR+ Y GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVTPFEKKCKSEQIPGVHGQRRQRISEY-GLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EKQFRNYYKEAARLKGATGELLLQLLESRLDNVVYRMGFGSTRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNGR+VN+ SY+ K GDV+ V++K+K A + A + A R ++ + M Sbjct: 119 SHKAIAVNGRTVNVASYQVKPGDVVSVREKAKNQARIQNALGIAANRGDVAWVETDAKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + NL+VE YS+ Sbjct: 179 EGTFKALPERGD---LSADINENLIVELYSK 206 >gi|15892391|ref|NP_360105.1| 30S ribosomal protein S4 [Rickettsia conorii str. Malish 7] gi|157828341|ref|YP_001494583.1| 30S ribosomal protein S4 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933050|ref|YP_001649839.1| 30S ribosomal protein S4 [Rickettsia rickettsii str. Iowa] gi|229586609|ref|YP_002845110.1| 30S ribosomal protein S4 [Rickettsia africae ESF-5] gi|238651051|ref|YP_002916908.1| 30S ribosomal protein S4 [Rickettsia peacockii str. Rustic] gi|26399443|sp|Q92IF2|RS4_RICCN RecName: Full=30S ribosomal protein S4 gi|172045661|sp|A8F1B5|RS4_RICM5 RecName: Full=30S ribosomal protein S4 gi|172047812|sp|A8GRQ0|RS4_RICRS RecName: Full=30S ribosomal protein S4 gi|189045394|sp|B0BX57|RS4_RICRO RecName: Full=30S ribosomal protein S4 gi|259495290|sp|C3PN57|RS4_RICAE RecName: Full=30S ribosomal protein S4 gi|259495291|sp|C4K2Q9|RS4_RICPU RecName: Full=30S ribosomal protein S4 gi|15619541|gb|AAL03006.1| 30S ribosomal protein S4 [Rickettsia conorii str. Malish 7] gi|157800822|gb|ABV76075.1| 30S ribosomal protein S4 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908137|gb|ABY72433.1| SSU ribosomal protein S4P [Rickettsia rickettsii str. Iowa] gi|228021659|gb|ACP53367.1| 30S ribosomal protein S4 [Rickettsia africae ESF-5] gi|238625149|gb|ACR47855.1| 30S ribosomal protein S4 [Rickettsia peacockii str. Rustic] Length = 205 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 97/206 (47%), Positives = 136/206 (66%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+FR+IF A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H Sbjct: 61 HYGRVTEKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ +I S R K GDVIEVK+ KQ+ + E+ + P Y+S + ++ ++ Sbjct: 121 IKLNGKKADIASIRLKAGDVIEVKESVKQIPLIQESVSKQGQTTPGYLSFDVPSLTGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYP + +LV+E YSR Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205 >gi|78186094|ref|YP_374137.1| 30S ribosomal protein S4 [Chlorobium luteolum DSM 273] gi|90101702|sp|Q3B6D7|RS4_PELLD RecName: Full=30S ribosomal protein S4 gi|78165996|gb|ABB23094.1| SSU ribosomal protein S4P [Chlorobium luteolum DSM 273] Length = 203 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R + PG HGQ R+ K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGVALSPKAEKYLERRPFAPGQHGQGRRGKISEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR+ +K+A RG T NL+ +E RLD +V+RA F P+ ARQ V+H H Sbjct: 61 LYG-ILEKQFRNYYKKAVSQRGVTGDNLVKLIERRLDNVVFRAGFAPSRAGARQLVSHSH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR VNI S+ GD+IE +QKS+ + +V +A A + +P +I V+ N A F Sbjct: 120 LLVNGRKVNIPSFLVSPGDLIEFRQKSRNMDAVTDALNRAPDARIPAWIQVDKANQKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P V LVVE YS+ Sbjct: 180 LSVPER---VDIQEPYNEQLVVELYSK 203 >gi|83816564|ref|YP_445191.1| 30S ribosomal protein S4 [Salinibacter ruber DSM 13855] gi|294507075|ref|YP_003571133.1| 30S ribosomal protein S4 [Salinibacter ruber M8] gi|123529117|sp|Q2S3P0|RS4_SALRD RecName: Full=30S ribosomal protein S4 gi|83757958|gb|ABC46071.1| ribosomal protein S4 [Salinibacter ruber DSM 13855] gi|294343403|emb|CBH24181.1| 30S ribosomal protein S4 [Salinibacter ruber M8] Length = 200 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR E ++G K + + Y PG HGQ R+ + S + +QL+ KQK K Sbjct: 1 MARYRGPKQKIARRFKEPIFGPSK-ALERKPYPPGQHGQSRRRRESEYAVQLKEKQKTKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++F+++F +A R +G T L+ LE+RLD V+R T ARQFV HRH Sbjct: 60 TYG-LLERQFKNLFDKASRMQGVTGEKLLILLEARLDNTVFRMGIARTRRQARQFVAHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VN V+I SY DV+ VK S+ L + + +R ++ ++ M F+ Sbjct: 119 IMVNDEVVDIPSYEMSPDDVVSVKPSSQDLEVIQTNVEHRQRTF-SWLEMDRQEMKGKFI 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ + P + L+VE YS+ Sbjct: 178 DYPNREE---IPENIDEQLIVELYSK 200 >gi|172058242|ref|YP_001814702.1| ribosomal protein S4 [Exiguobacterium sibiricum 255-15] gi|226699065|sp|B1YKD2|RS4_EXIS2 RecName: Full=30S ribosomal protein S4 gi|171990763|gb|ACB61685.1| ribosomal protein S4 [Exiguobacterium sibiricum 255-15] Length = 199 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L K + R Y PG HG R+ Y GLQL+AKQ ++ Sbjct: 1 MARYTGPAWKLSRRLGISLTETGKE-IAKRPYAPGQHGNSRRKMSEY-GLQLQAKQTLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F IF +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 59 MYG-VNERQFNRIFNDAGKMPGIHGENFMFLLEARLDNVVYRMGMARTRRAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I S+R K G I V++KSK + EA ++A ++++ + + + TFV Sbjct: 118 IQVDGARVDIPSFRVKPGQTISVREKSKNFVVIKEALEVAPATK-DFVTFDAEKLEGTFV 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + +Q LVVE+YSR Sbjct: 177 RLPERSE---LNDQIQEQLVVEYYSR 199 >gi|196228479|ref|ZP_03127346.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428] gi|196227882|gb|EDY22385.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428] Length = 203 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 7/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 M++ K +I RR G L+G K + ++YGPG+HG + + K S + + L KQK++ Sbjct: 1 MARYTGPKTRISRRFGVALFGPSK-ALERKNYGPGMHGPKGSRRKQSEYAIALGEKQKLR 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR F A RG T L+ LE+RLD ++YR F + AARQ V+H Sbjct: 60 YQYGVL-ERQFRRYFTIASTRRGVTGEILLQLLETRLDNVIYRLGFANSRSAARQLVSHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178 HV VNGR V++ S+ K GD I +K K + + +L + VPE+++V+ + Sbjct: 119 HVQVNGRKVDVSSFNVKAGDAITIKDKPQSRRLAAKNLELTQITPVPEWLTVDKEQFSGK 178 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIPS + P + L+VE YSR Sbjct: 179 VSRIPSRDEIAPI---VNEQLIVELYSR 203 >gi|22538271|ref|NP_689122.1| 30S ribosomal protein S4 [Streptococcus agalactiae 2603V/R] gi|25012131|ref|NP_736526.1| 30S ribosomal protein S4 [Streptococcus agalactiae NEM316] gi|76787020|ref|YP_330685.1| 30S ribosomal protein S4 [Streptococcus agalactiae A909] gi|76799096|ref|ZP_00781286.1| ribosomal protein S4 [Streptococcus agalactiae 18RS21] gi|77406884|ref|ZP_00783910.1| ribosomal protein S4 [Streptococcus agalactiae H36B] gi|77408905|ref|ZP_00785630.1| ribosomal protein S4 [Streptococcus agalactiae COH1] gi|77410869|ref|ZP_00787226.1| ribosomal protein S4 [Streptococcus agalactiae CJB111] gi|77413207|ref|ZP_00789405.1| ribosomal protein S4 [Streptococcus agalactiae 515] gi|41017840|sp|Q8DWS6|RS4_STRA5 RecName: Full=30S ribosomal protein S4 gi|41017841|sp|Q8E2M6|RS4_STRA3 RecName: Full=30S ribosomal protein S4 gi|90101728|sp|Q3JYG8|RS4_STRA1 RecName: Full=30S ribosomal protein S4 gi|22535185|gb|AAN00995.1|AE014288_13 ribosomal protein S4 [Streptococcus agalactiae 2603V/R] gi|24413675|emb|CAD47755.1| 30S ribosomal protein S4 [Streptococcus agalactiae NEM316] gi|76562077|gb|ABA44661.1| ribosomal protein S4 [Streptococcus agalactiae A909] gi|76585564|gb|EAO62132.1| ribosomal protein S4 [Streptococcus agalactiae 18RS21] gi|77160747|gb|EAO71860.1| ribosomal protein S4 [Streptococcus agalactiae 515] gi|77163087|gb|EAO74041.1| ribosomal protein S4 [Streptococcus agalactiae CJB111] gi|77172496|gb|EAO75640.1| ribosomal protein S4 [Streptococcus agalactiae COH1] gi|77174516|gb|EAO77359.1| ribosomal protein S4 [Streptococcus agalactiae H36B] gi|319746120|gb|EFV98393.1| 30S ribosomal protein S4 [Streptococcus agalactiae ATCC 13813] Length = 203 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A +++ T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKAKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|254426804|ref|ZP_05040511.1| ribosomal protein S4 [Alcanivorax sp. DG881] gi|196192973|gb|EDX87932.1| ribosomal protein S4 [Alcanivorax sp. DG881] Length = 210 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 12/214 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQ------RRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + P+ ++ GQ RR ++ S +G+QLR Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGIRPLESKCKAEQAPGQAAGASGRRPARLSDYGVQLR 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+++ YG + EK+FRS +K+A S+G T L+ LE RLD +VYR F T AR Sbjct: 61 EKQKVRRTYGVL-EKQFRSYYKKAAASKGATGEVLLQLLEGRLDNVVYRMGFGSTRSEAR 119 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNH 172 Q V+HR +LVNG+SVN+ SY+ K GD I V++KSK V A +LA +R +I V+ Sbjct: 120 QLVSHRAILVNGQSVNVASYQVKPGDQINVREKSKNQLRVKNAMELAQQRGFMPWIEVDD 179 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T+ P + P + NL+VE YS+ Sbjct: 180 KKLEGTYKAKPER---IDLPAEINENLIVELYSK 210 >gi|149912288|ref|ZP_01900859.1| 30S ribosomal protein S4 [Moritella sp. PE36] gi|149804633|gb|EDM64692.1| 30S ribosomal protein S4 [Moritella sp. PE36] Length = 206 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGVHGA-RKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+++KEA R +G+T NL++ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRMYGVL-EKQFRNLYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNG+ VNI SY+ K D + +++K+K+ A + A +++E R+ ++ V+ + Sbjct: 119 SHKAIVVNGKVVNIPSYKVKVNDTVSIREKAKKQARIASALEISEQREKASWVEVDSKTL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R+P + L+VE YS+ Sbjct: 179 EGVYKRVPERSD---LSADINEQLIVELYSK 206 >gi|257483209|ref|ZP_05637250.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331012437|gb|EGH92493.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 206 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQRR + Y G QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +KEA +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKEAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ V VNG++VN+ SY+ + GDV+ +++K+K +++A L A+R E++ V+ +N Sbjct: 119 SHKSVSVNGKTVNVPSYQVRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTENK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206 >gi|229592879|ref|YP_002874998.1| 30S ribosomal protein S4 [Pseudomonas fluorescens SBW25] gi|312963346|ref|ZP_07777829.1| 30S ribosomal protein S4 [Pseudomonas fluorescens WH6] gi|330812052|ref|YP_004356514.1| 30S ribosomal protein S4 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|259495288|sp|C3K2V2|RS4_PSEFS RecName: Full=30S ribosomal protein S4 gi|229364745|emb|CAY52725.1| 30S ribosomal protein S4 [Pseudomonas fluorescens SBW25] gi|311282426|gb|EFQ61024.1| 30S ribosomal protein S4 [Pseudomonas fluorescens WH6] gi|327380160|gb|AEA71510.1| 30S ribosomal protein S4 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 206 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQRR + Y G QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +KEA +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKEAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VN+ SY+ + GDV+ V++K+K +++A L A+R E++ V+ + Sbjct: 119 SHKSISVNGQTVNVPSYQVRAGDVVAVREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206 >gi|330505183|ref|YP_004382052.1| 30S ribosomal protein S4 [Pseudomonas mendocina NK-01] gi|328919469|gb|AEB60300.1| 30S ribosomal protein S4 [Pseudomonas mendocina NK-01] Length = 206 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +K+A +G T NL+ LE RLD +VYR + T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKQAASQKGATGENLLQLLECRLDNVVYRMGYGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VN+ SY+ K GDV+ V++KSK + +A +L A+R E++ V+ + Sbjct: 119 SHKAISVNGQTVNVPSYQVKAGDVVAVREKSKNQLRIAQALELCAQRGRVEWVEVDAEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206 >gi|162022123|ref|YP_246565.2| 30S ribosomal protein S4 [Rickettsia felis URRWXCal2] gi|90101714|sp|Q4UM23|RS4_RICFE RecName: Full=30S ribosomal protein S4 Length = 205 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 98/206 (47%), Positives = 137/206 (66%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+FR+IF A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H Sbjct: 61 HYGRVTEKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ +I S R KEGDVIEVK+ KQ+ + E+ + P Y+S + ++ ++ Sbjct: 121 IKLNGKKADIASIRLKEGDVIEVKESVKQIPLIQESVSKQAQTTPGYLSFDVPSLTGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYP + +LV+E YSR Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205 >gi|323350794|ref|ZP_08086453.1| 30S ribosomal protein S4 [Streptococcus sanguinis VMC66] gi|322122968|gb|EFX94671.1| 30S ribosomal protein S4 [Streptococcus sanguinis VMC66] gi|325689321|gb|EGD31327.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK115] gi|325695727|gb|EGD37626.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK150] Length = 245 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 43 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 101 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + N + LE RLD +VYR T ARQFVNH Sbjct: 102 TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 160 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 161 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 219 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFY++ Sbjct: 220 TRLPERDE---INPEINEALIVEFYNK 243 >gi|182418834|ref|ZP_02950099.1| ribosomal protein S4 [Clostridium butyricum 5521] gi|237666637|ref|ZP_04526622.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377331|gb|EDT74892.1| ribosomal protein S4 [Clostridium butyricum 5521] gi|237657836|gb|EEP55391.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 206 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HG +K Y G+QLR Sbjct: 1 MARYTGATCRLCRREGMKLFLKGDRCFTDKCAFVRRSYAPGQHGANKKKISGY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR+ +++A+ +G + NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKAKRIYGVL-ESQFRAYYEKAEHMKGISGENLLKLLEMRLDNVVYRLGYGASRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY DVI V +KS+ ++ + +P ++ N DN Sbjct: 119 LVTHGHFLVNGKKVDICSYSVSANDVITVCEKSRASEKFKTFAENP-KTLPAWLEANVDN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +PS + V + L+VE YS+ Sbjct: 178 FEGKVVAVPSREE---IDVPVNETLIVELYSK 206 >gi|331004909|ref|ZP_08328325.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC1989] gi|330421296|gb|EGG95546.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC1989] Length = 205 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 123/210 (58%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + ++++ PG+HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPTCKLARREGTDLFLKSGVRSLDSKCKLETAPGVHG-VRRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRTYGVL-EKQFRAYYKEAARRKGATGENLLKLLETRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 +H+ +LVNG +VNI SY+ K DVI +++K+K + A LA + E++ V+ + Sbjct: 119 SHKSILVNGSTVNIPSYQVKAEDVISIREKAKNQLRIKSALDLAAQRDVEWVEVSAAKLE 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T R+P P + NL+VE YS+ Sbjct: 179 GTLKRVPDR---EDLPAEINENLIVELYSK 205 >gi|21674972|ref|NP_663037.1| 30S ribosomal protein S4 [Chlorobium tepidum TLS] gi|26399358|sp|P59129|RS4_CHLTE RecName: Full=30S ribosomal protein S4 gi|21648204|gb|AAM73379.1| ribosomal protein S4 [Chlorobium tepidum TLS] Length = 203 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R Y PG HGQ R+ K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGIALSPKAEKYLERRPYAPGQHGQSRRGKVSEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR+ +K+A RG T NL+ LE RLD +VYR F P+ ARQ V H H Sbjct: 61 LYG-ILEKQFRNYYKKAVAQRGVTGDNLVKMLERRLDNVVYRCGFSPSRAGARQLVTHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI S+ GD IE +QKS+ L +V ++ + + +PE+I V+ N A F Sbjct: 120 MLVNGKKVNIPSFLVSPGDQIEFRQKSRNLDAVADSLNKVPDSRIPEWIQVDKANRKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + IP LVVE YS+ Sbjct: 180 LAIPER---EAVQEPFNEQLVVELYSK 203 >gi|331701254|ref|YP_004398213.1| 30S ribosomal protein S4 [Lactobacillus buchneri NRRL B-30929] gi|329128597|gb|AEB73150.1| ribosomal protein S4 [Lactobacillus buchneri NRRL B-30929] Length = 203 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G +L G K ++ R Y PG HGQ R+SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRSKLSEYGLQLHEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLEERLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI V++KSK L + +A + A P+Y+S + D + + Sbjct: 119 HITVDGKRVDIPSYEVQPGQVISVREKSKDLQVIKDAVE-AVVGRPQYVSFDADKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + +L+VE+Y++ Sbjct: 178 VRLPQREE---LDADIDESLIVEYYNK 201 >gi|319944771|ref|ZP_08019035.1| 30S ribosomal protein S4 [Lautropia mirabilis ATCC 51599] gi|319742020|gb|EFV94443.1| 30S ribosomal protein S4 [Lautropia mirabilis ATCC 51599] Length = 207 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 123/211 (58%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + +++++ PG HG+ + S +GLQLR KQ Sbjct: 1 MARYTGPKAKLSRREGTDLFLKSARRSLDSKAKADTKPGQHGRTSGQRTSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + E++FR F EA R RG+T L+ LESRLD +VYR T ARQ V Sbjct: 61 KVKRMYGVL-ERQFRRYFAEASRKRGNTGELLLQLLESRLDNVVYRMGLASTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR +LVNG +N+ S K DVI VK+ +K+ A +++A LAE+ + P ++SV+ + M Sbjct: 120 SHRAILVNGAILNVPSAAIKPNDVISVKESAKKQARIVDALNLAEQHNFPSWVSVDKNKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F P + + +L+VE YSR Sbjct: 180 EGVFKAYPDRSE---IAADVNESLIVELYSR 207 >gi|306834567|ref|ZP_07467680.1| 30S ribosomal protein S4 [Streptococcus bovis ATCC 700338] gi|304423369|gb|EFM26522.1| 30S ribosomal protein S4 [Streptococcus bovis ATCC 700338] Length = 203 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G T N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKIKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDTEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVE+Y++ Sbjct: 178 TRLPERDE---INPEINEALVVEYYNK 201 >gi|194335471|ref|YP_002017265.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1] gi|226699099|sp|B4SBX3|RS4_PELPB RecName: Full=30S ribosomal protein S4 gi|194307948|gb|ACF42648.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1] Length = 203 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R + PG HGQ RK K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGIALAPKAEKYLERRPFPPGQHGQGRKGKVSEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR+ +K+A RG T NL+ LE R D +V+RA F P+ ARQ V H H Sbjct: 61 LYG-ILEKQFRNYYKKAVSQRGVTGDNLVKLLERRFDNVVFRAGFAPSRSGARQLVTHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +L+NG+ V+I SY +VIE +Q+SK + +V ++ A E +P +I V+ N A F Sbjct: 120 LLINGKKVDIPSYIVSPSEVIEFRQRSKNMGAVTDSLNKAPESRIPSWIQVDKANQKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ LVVE YS+ Sbjct: 180 LSVPERVE---VQEPFNEQLVVELYSK 203 >gi|300770226|ref|ZP_07080105.1| 30S ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33861] gi|300762702|gb|EFK59519.1| 30S ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33861] Length = 202 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ E ++G K + ++Y PG HG +R+ K S + +QL KQK K Sbjct: 1 MARYTGPKSKIARKFREPIFGPDK-ALEKKNYPPGQHGPSKRRGKQSEYAIQLLEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++F ++F +A +G T N + LE+RLD VYR PT AARQ V+H+ Sbjct: 60 YTYGVL-ERQFSNLFVKAAAKQGITGENFLKLLEARLDNTVYRLGIAPTRAAARQLVSHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY + GDVI V+++S+ L +V + + + + ++ N + TF Sbjct: 119 HITVNGGVVNIPSYSLRPGDVIAVRERSQALEAVTTSVEGRKINKFAWLEWNANEFKGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P P ++ NL+VE YS+ Sbjct: 179 LSYPERTD---IPENIKENLIVELYSK 202 >gi|89893244|ref|YP_516731.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense Y51] gi|122483915|sp|Q250K5|RS4_DESHY RecName: Full=30S ribosomal protein S4 gi|89332692|dbj|BAE82287.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense Y51] Length = 208 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 123/212 (58%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K ++ R+Y PG HGQ R KP+ +G+QLR Sbjct: 1 MARYTGPVCRLCRREGMKLFLKGDRCYTGKCAIDRRAYAPGQHGQSRGKKPTEYGIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+FRS + +A+R +G NL+ LE RLD +V++ F + ARQ Sbjct: 61 KQKVRRIYG-VQEKQFRSYYDKANRQKGIVGENLLRLLERRLDNVVFQLGFATSRPEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H +NGR V+I S+ + GDV+ VK+ SK + E +R P++++++ + Sbjct: 120 LVRHGHFTINGRRVDIPSFLVRVGDVVGVKEASKSSPRLKEILSSLDRTPPKWMNLDANA 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T + +P +D+ P +Q +L+VE YSR Sbjct: 180 ATGTIIALPDR-EDIQLP--IQEHLIVEKYSR 208 >gi|206890097|ref|YP_002249221.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347] gi|226695094|sp|B5YG23|RS4_THEYD RecName: Full=30S ribosomal protein S4 gi|206742035|gb|ACI21092.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 208 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR ++ + K R Y PG HG R K S +GLQLR Sbjct: 1 MARYTGSLCRLCRRESMKMFLKGTRCYTEKCAFERRKYPPGQHGHNR-GKLSDYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E++F++ F++A + +G T NL+ LE RLD ++YR F ARQ Sbjct: 60 KQKVKRIYG-VMERQFKNYFEKATKMKGVTGENLLKLLERRLDNVIYRMGFAMNRRQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H + VNG+ V+I SY + GD+IE+ Q K+L + E+ LAE R P ++ VN + Sbjct: 119 LVRHGYFTVNGKKVDIPSYLVRPGDIIEIVQSGKELEIIKESLALAEQRGFPVWLEVNAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M FVR+P + + +Q L+VEFYS+ Sbjct: 179 EMKGKFVRLPEREE---MQLPVQEQLIVEFYSK 208 >gi|28867878|ref|NP_790497.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato str. DC3000] gi|66047752|ref|YP_237593.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. syringae B728a] gi|71734874|ref|YP_276682.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213969238|ref|ZP_03397376.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato T1] gi|289623825|ref|ZP_06456779.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648918|ref|ZP_06480261.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aesculi str. 2250] gi|289675512|ref|ZP_06496402.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. syringae FF5] gi|298489072|ref|ZP_07007094.1| SSU ribosomal protein S4p (S9e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|301381745|ref|ZP_07230163.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato Max13] gi|302061055|ref|ZP_07252596.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato K40] gi|302130804|ref|ZP_07256794.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302189301|ref|ZP_07265974.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. syringae 642] gi|37999395|sp|Q889U7|RS4_PSESM RecName: Full=30S ribosomal protein S4 gi|81307873|sp|Q4ZMR7|RS4_PSEU2 RecName: Full=30S ribosomal protein S4 gi|90101706|sp|Q48D60|RS4_PSE14 RecName: Full=30S ribosomal protein S4 gi|28851114|gb|AAO54192.1| ribosomal protein S4 [Pseudomonas syringae pv. tomato str. DC3000] gi|63258459|gb|AAY39555.1| Ribosomal protein S4, bacterial and organelle form [Pseudomonas syringae pv. syringae B728a] gi|71555427|gb|AAZ34638.1| ribosomal protein S4 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213925916|gb|EEB59473.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato T1] gi|298156384|gb|EFH97482.1| SSU ribosomal protein S4p (S9e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322298|gb|EFW78392.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. glycinea str. B076] gi|320331956|gb|EFW87892.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. glycinea str. race 4] gi|330869407|gb|EGH04116.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879399|gb|EGH13548.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. glycinea str. race 4] gi|330879418|gb|EGH13567.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330891908|gb|EGH24569.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. mori str. 301020] gi|330899712|gb|EGH31131.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940914|gb|EGH43865.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. pisi str. 1704B] gi|330953173|gb|EGH53433.1| 30S ribosomal protein S4 [Pseudomonas syringae Cit 7] gi|330962501|gb|EGH62761.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330966887|gb|EGH67147.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330969797|gb|EGH69863.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330988258|gb|EGH86361.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331018184|gb|EGH98240.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 206 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +KEA +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKEAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ V VNG++VN+ SY+ + GDV+ +++K+K +++A L A+R E++ V+ + Sbjct: 119 SHKSVSVNGKTVNVPSYQVRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206 >gi|187935054|ref|YP_001884501.1| 30S ribosomal protein S4 [Clostridium botulinum B str. Eklund 17B] gi|188590506|ref|YP_001919700.1| 30S ribosomal protein S4 [Clostridium botulinum E3 str. Alaska E43] gi|251777686|ref|ZP_04820606.1| 30S ribosomal protein S4 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226697826|sp|B2UYD8|RS4_CLOBA RecName: Full=30S ribosomal protein S4 gi|226697827|sp|B2TIK3|RS4_CLOBB RecName: Full=30S ribosomal protein S4 gi|187723207|gb|ACD24428.1| 30S ribosomal protein S4 [Clostridium botulinum B str. Eklund 17B] gi|188500787|gb|ACD53923.1| 30S ribosomal protein S4 [Clostridium botulinum E3 str. Alaska E43] gi|243082001|gb|EES47891.1| 30S ribosomal protein S4 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 206 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HG +K K S +G+QLR Sbjct: 1 MARYTGATCRLCRREGMKLFLKGDRCFTDKCAFVRRSYAPGQHGASKK-KMSNYGIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR+ +++A+ +G T NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKARRIYG-ILEGQFRTYYEKAEHMKGITGENLLKLLEMRLDNVVYRLGYGASRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY DVI V +KS+ + + +P+++ N DN Sbjct: 119 LVTHGHFLVNGKKVDICSYHVSMNDVITVCEKSRSSEKFKTFVENP-KTLPKWLEANVDN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V PS +D+ PV L+VE YS+ Sbjct: 178 YEGKVVAEPSR-EDIDVPV--NETLIVELYSK 206 >gi|225850762|ref|YP_002730996.1| 30S ribosomal protein S4 [Persephonella marina EX-H1] gi|254764604|sp|C0QQQ0|RS4_PERMH RecName: Full=30S ribosomal protein S4 gi|225645002|gb|ACO03188.1| ribosomal protein S4 [Persephonella marina EX-H1] Length = 205 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 7/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG--QRRKSKPSYFGLQLRAKQKM 58 M + K+ RR+G + G K R++ PG HG Q RK K S + ++L+ KQK+ Sbjct: 1 MGRYLGPLTKVSRRLGVFVGGSLK-AFQKRNFPPGQHGRVQGRKVKLSDYAIRLQEKQKL 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG I EK+F+ F EA RS G+T L+ LE RLD +VYR F T ARQ V H Sbjct: 60 RYLYGGIREKQFKRYFDEAARSAGNTGQILLQLLERRLDNVVYRLGFAKTRRQARQLVRH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 H LVNGR V+I SYR GD+IE+++KS+ E + + R +P ++ ++ +N Sbjct: 120 GHFLVNGRKVDIPSYRVDPGDIIELREKSRNSPLFKENLESRDPRSIPNWLELDKENFRG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 + IP +++ + + L++EFYS Sbjct: 180 KVLEIP---QEIELEIPVNVQLIIEFYS 204 >gi|170078686|ref|YP_001735324.1| 30S ribosomal protein S4 [Synechococcus sp. PCC 7002] gi|226695087|sp|B1XI84|RS4_SYNP2 RecName: Full=30S ribosomal protein S4 gi|169886355|gb|ACB00069.1| ribosomal protein S4 [Synechococcus sp. PCC 7002] Length = 202 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++ +I RR+GE KS R Y PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MARYRGARLRITRRLGELPGLTRKSA--RREYPPGQHGQGRRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ ++A R+ G T ++ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VSEKQLIRYVRKARRTTGSTGQTILQLLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I SY+C+ GDVI V+ + + + + ++P ++ + + Sbjct: 117 ILVNGRVVDIPSYQCRPGDVITVRDRDRSRKLIEANMEFPGLANIPSHLEFDKPTLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 NGIIER---EWVALQINELLVVEYYSR 200 >gi|28198376|ref|NP_778690.1| 30S ribosomal protein S4 [Xylella fastidiosa Temecula1] gi|182681017|ref|YP_001829177.1| 30S ribosomal protein S4 [Xylella fastidiosa M23] gi|32129992|sp|Q87E60|RS4_XYLFT RecName: Full=30S ribosomal protein S4 gi|226703311|sp|B2I8J2|RS4_XYLF2 RecName: Full=30S ribosomal protein S4 gi|28056446|gb|AAO28339.1| 30S ribosomal protein S4 [Xylella fastidiosa Temecula1] gi|182631127|gb|ACB91903.1| ribosomal protein S4 [Xylella fastidiosa M23] Length = 208 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + R PG HG RKSK S + QLR Sbjct: 1 MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K A +G+T NL+ LE+RLD ++YR F T AAR Sbjct: 58 EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171 Q V+HR VLVNG+ VN+ SY K GDV+ + Q++++ V E+ + ++ +I V+ Sbjct: 117 QLVSHRSVLVNGKMVNLPSYHVKPGDVVALSQRAQKYLCVQESLTIKDQHGSAFSWIEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +P P + L+VE YS+ Sbjct: 177 SEKFSGVFKALPDRAD---LPSDINEALIVELYSK 208 >gi|71276503|ref|ZP_00652778.1| Ribosomal protein S4, bacterial and organelle form [Xylella fastidiosa Dixon] gi|71900586|ref|ZP_00682713.1| Ribosomal protein S4, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|170729723|ref|YP_001775156.1| 30S ribosomal protein S4 [Xylella fastidiosa M12] gi|226703312|sp|B0U5M2|RS4_XYLFM RecName: Full=30S ribosomal protein S4 gi|71162680|gb|EAO12407.1| Ribosomal protein S4, bacterial and organelle form [Xylella fastidiosa Dixon] gi|71729643|gb|EAO31747.1| Ribosomal protein S4, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|167964516|gb|ACA11526.1| 30S ribosomal protein S4 [Xylella fastidiosa M12] Length = 208 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 117/215 (54%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + R PG HG RKSK S + QLR Sbjct: 1 MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K A +G+T NL+ LE+RLD ++YR F T AAR Sbjct: 58 EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171 Q V+HR VLVNG+ VN+ SY K GD++ + Q++++ V E+ + ++ ++ V+ Sbjct: 117 QLVSHRGVLVNGKIVNLPSYHVKPGDIVALSQRAQKYLCVQESLTIKDQHGSAFSWVEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +P P + L+VE YS+ Sbjct: 177 SEKFSGVFKALPDRAD---LPSDINEALIVELYSK 208 >gi|86132569|ref|ZP_01051162.1| 30S ribosomal protein S4 [Dokdonia donghaensis MED134] gi|85816811|gb|EAQ37996.1| 30S ribosomal protein S4 [Dokdonia donghaensis MED134] Length = 201 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ E ++G KS R+Y PG HG RR+ K S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFSEAIFGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAVQLAEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++FR+++ A+R+ G T L+ E RLD +VYR P+ ARQ V HR Sbjct: 60 YTYG-ILERQFRNMYDRANRAPGITGEVLLQLCECRLDNVVYRMGMSPSRSGARQLVGHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY+ K GDVI V++KSK L + + A V E+I+ N+D TF Sbjct: 119 HITVNGNIVNIPSYQVKAGDVIAVREKSKSLEVISNSLSNASH-VFEWITWNNDKKEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P L+ P + +VE YS+ Sbjct: 178 VAVPQRLQ---IPENINTQFIVELYSK 201 >gi|150015071|ref|YP_001307325.1| 30S ribosomal protein S4 [Clostridium beijerinckii NCIMB 8052] gi|189045374|sp|A6LPT9|RS4_CLOB8 RecName: Full=30S ribosomal protein S4 gi|149901536|gb|ABR32369.1| ribosomal protein S4 [Clostridium beijerinckii NCIMB 8052] Length = 206 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HG +K K S +G+QLR Sbjct: 1 MARYTGATCRLCRREGMKLFLKGDRCFTDKCAFVRRSYAPGQHGANKK-KVSNYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR+ +++A+ +G T NL+ LE RLD IVYR + + ARQ Sbjct: 60 KQKARRIYG-ILEGQFRTYYEKAEHIKGITGENLLKLLEMRLDNIVYRLGYGSSRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY DVI V +KS+ + + +P+++ N DN Sbjct: 119 LVTHGHFLVNGKKVDICSYHVSVNDVITVCEKSRSSEKFKTFVENP-KTLPKWLEANVDN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V PS +D+ PV L+VE YS+ Sbjct: 178 YEGKVVAEPSR-EDIDVPV--NETLIVELYSK 206 >gi|303247017|ref|ZP_07333293.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ] gi|302491724|gb|EFL51607.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ] Length = 208 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K +I RR G L+ + K R Y PG HG+ RK K S + + LR Sbjct: 1 MARYTEAKCRICRREGAKLFLKGDRCYTDKCAYERRPYAPGQHGRIRK-KMSDYAVMLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR+ F+ AD +G T NL+ FLE R+D ++YR F + ARQ Sbjct: 60 KQKTRRMYG-ILEGQFRAYFQRADMKKGVTGENLLCFLERRMDNVIYRLGFANSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H VNGR V I S + K GDVIEV+++++Q + EA Q +A R P ++ V+ + Sbjct: 119 LVRHGIFTVNGRRVTIPSLQVKVGDVIEVRERNRQSPIIQEAQQVIARRGCPAWLEVDGE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ +DV +P + L+VE YS+ Sbjct: 179 KLKGKVNALPTR-EDVQFP--INEQLIVELYSK 208 >gi|290890943|ref|ZP_06554007.1| hypothetical protein AWRIB429_1397 [Oenococcus oeni AWRIB429] gi|290479342|gb|EFD88002.1| hypothetical protein AWRIB429_1397 [Oenococcus oeni AWRIB429] Length = 250 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ K ++ RR+G +L G K + R Y PG HG R+ K S + QLR KQK++ Sbjct: 47 MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 105 Query: 60 KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +SE++F ++F +A + +G N LE+RLD++V+R T ARQ VNH Sbjct: 106 FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 164 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+LV+G+ V I SY K G +I V+++SK++ +L + + + + P ++ + D + Sbjct: 165 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 223 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + +L+VE+Y+R Sbjct: 224 LTRYPEREE---LGADINESLIVEYYNR 248 >gi|256847990|ref|ZP_05553434.1| ribosomal protein S4 [Lactobacillus coleohominis 101-4-CHN] gi|256715050|gb|EEU30027.1| ribosomal protein S4 [Lactobacillus coleohominis 101-4-CHN] Length = 202 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ RR+G +L G K + R Y PG HG R+ S +G QLR KQK++ Sbjct: 1 MSRYTGPSWRLSRRLGVSLSGTGKE-LARRPYAPGDHGNDRRGSLSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++FK A + + T N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-LTERQFRNLFKRAGKIKEGTHGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY VI V++KSK L + A A P Y+ + D + Sbjct: 119 HITVDGKRVDIPSYEVSVDQVIGVREKSKDLDIIKNAVD-AVVARPSYVEFDADKLEGKL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P+ + L+VEFY++ Sbjct: 178 VRLPAR---EDMNADIDEALIVEFYNK 201 >gi|157825598|ref|YP_001493318.1| 30S ribosomal protein S4 [Rickettsia akari str. Hartford] gi|172047793|sp|A8GN35|RS4_RICAH RecName: Full=30S ribosomal protein S4 gi|157799556|gb|ABV74810.1| 30S ribosomal protein S4 [Rickettsia akari str. Hartford] Length = 205 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 95/206 (46%), Positives = 136/206 (66%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDGKDAFNTRNYRPGQHGQNAMIKTSDYGLHLKAKQRLKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+FR++F A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H Sbjct: 61 HYGRVTEKQFRNLFVLAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ +I S R KEGDVI +K+ KQ+ + E+ + P Y+S + ++ ++ Sbjct: 121 IKLNGKKADIASIRLKEGDVIAIKESVKQIPLIQESVSKQGQTTPGYLSFDVHSLTGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYP + +LV+E YSR Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205 >gi|118586622|ref|ZP_01544062.1| 30S ribosomal protein S4 [Oenococcus oeni ATCC BAA-1163] gi|118432937|gb|EAV39663.1| 30S ribosomal protein S4 [Oenococcus oeni ATCC BAA-1163] Length = 250 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ K ++ RR+G +L G K + R Y PG HG R+ K S + QLR KQK++ Sbjct: 47 MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 105 Query: 60 KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +SE++F ++F +A + +G N LE+RLD++V+R T ARQ VNH Sbjct: 106 FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 164 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+LV+G+ V I SY K G +I V+++SK++ +L + + + + P ++ + D + Sbjct: 165 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 223 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + +L+VE+Y+R Sbjct: 224 LTRYPEREE---LGADINESLIVEYYNR 248 >gi|329766877|ref|ZP_08258405.1| 30S ribosomal protein S4 [Gemella haemolysans M341] gi|328837602|gb|EGF87227.1| 30S ribosomal protein S4 [Gemella haemolysans M341] Length = 200 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG + K S +GLQL+ KQK++ Sbjct: 1 MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G ++EK+FR +F +A + +G N ++ L +RLD++VY T ARQ VNH H Sbjct: 60 LHG-MNEKQFRKLFDKAGKLQGLHGENFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV+G+ V+I SY K G V+ V++KS+ L + EA ++ VPEY++ + D + + V Sbjct: 119 VLVDGKKVDIASYAVKPGQVVSVREKSRNLEIIKEAVEITNF-VPEYLTFDADKLEGSLV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSELHP---EINEQLIVEYYSR 200 >gi|171060594|ref|YP_001792943.1| 30S ribosomal protein S4 [Leptothrix cholodnii SP-6] gi|226699083|sp|B1Y7N0|RS4_LEPCP RecName: Full=30S ribosomal protein S4 gi|170778039|gb|ACB36178.1| ribosomal protein S4 [Leptothrix cholodnii SP-6] Length = 207 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + KS ++ PG HG+ S+ S FGLQLR Sbjct: 1 MARYLGPKAKLARREGTDLYLKSARRSISDKSKFESK---PGQHGRTSGSRTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F EADR +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-EKQFRRYFAEADRRKGNTGANLLLLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ V VNG+SVNI SY K GDVI V++KSK+ +++A +LA+ +P ++SV+ Sbjct: 117 QLVSHKAVTVNGQSVNIPSYLVKAGDVISVREKSKKQLRIIDALKLADSIGLPAWVSVDL 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F + P + + + +L+VE YSR Sbjct: 177 TKMEGIFKKAPDRDE---FGAEINESLIVELYSR 207 >gi|326692258|ref|ZP_08229263.1| 30S ribosomal protein S4 [Leuconostoc argentinum KCTC 3773] Length = 203 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K +I RR+G +L G K ++ R+Y PG HG R++K S +G+QLR KQK++ Sbjct: 1 MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKVSEYGMQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F S+F +A + R T N + LE RLD++VYR T ARQ VNH Sbjct: 60 TYG-LTERQFHSLFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGLATTRQQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY+ G VI V+ KSK + + A + P+++S + D + T Sbjct: 119 HILVDGQRVDIPSYQVTPGQVISVRDKSKNIVPIQVAVESVVAR-PQFVSFDADRLEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + + L+VE+Y+R Sbjct: 178 VRSPEREE---LDADINEALIVEYYNR 201 >gi|319946013|ref|ZP_08020262.1| 30S ribosomal protein S4 [Streptococcus australis ATCC 700641] gi|322390490|ref|ZP_08064008.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 903] gi|319747821|gb|EFW00066.1| 30S ribosomal protein S4 [Streptococcus australis ATCC 700641] gi|321142764|gb|EFX38224.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 903] Length = 203 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKEGTVGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|15675914|ref|NP_270088.1| 30S ribosomal protein S4 [Streptococcus pyogenes M1 GAS] gi|19747014|ref|NP_608150.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS8232] gi|21911369|ref|NP_665637.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS315] gi|28896741|ref|NP_803091.1| 30S ribosomal protein S4 [Streptococcus pyogenes SSI-1] gi|50915197|ref|YP_061169.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS10394] gi|71904527|ref|YP_281330.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS6180] gi|71911644|ref|YP_283194.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS5005] gi|94989474|ref|YP_597575.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS9429] gi|94991461|ref|YP_599561.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS10270] gi|94993361|ref|YP_601460.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS2096] gi|139474603|ref|YP_001129319.1| 30S ribosomal protein S4 [Streptococcus pyogenes str. Manfredo] gi|251783531|ref|YP_002997836.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|306826445|ref|ZP_07459757.1| 30S ribosomal protein S4 [Streptococcus pyogenes ATCC 10782] gi|54039513|sp|P66568|RS4_STRP3 RecName: Full=30S ribosomal protein S4 gi|54039514|sp|P66569|RS4_STRP8 RecName: Full=30S ribosomal protein S4 gi|54041965|sp|P66567|RS4_STRP1 RecName: Full=30S ribosomal protein S4 gi|61215413|sp|Q5X9C7|RS4_STRP6 RecName: Full=30S ribosomal protein S4 gi|90101729|sp|Q48QN5|RS4_STRPM RecName: Full=30S ribosomal protein S4 gi|152112264|sp|Q1J995|RS4_STRPB RecName: Full=30S ribosomal protein S4 gi|152112265|sp|Q1JJE2|RS4_STRPC RecName: Full=30S ribosomal protein S4 gi|152112266|sp|Q1JEE1|RS4_STRPD RecName: Full=30S ribosomal protein S4 gi|152112268|sp|A2RGZ8|RS4_STRPG RecName: Full=30S ribosomal protein S4 gi|13623152|gb|AAK34809.1| 30S ribosomal protein S4 [Streptococcus pyogenes M1 GAS] gi|19749271|gb|AAL98649.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS8232] gi|21905585|gb|AAM80440.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS315] gi|28811995|dbj|BAC64924.1| 30S ribosomal protein S4 [Streptococcus pyogenes SSI-1] gi|50904271|gb|AAT87986.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS10394] gi|71803622|gb|AAX72975.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS6180] gi|71854426|gb|AAZ52449.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS5005] gi|94542982|gb|ABF33031.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS9429] gi|94544969|gb|ABF35017.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS10270] gi|94546869|gb|ABF36916.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS2096] gi|134272850|emb|CAM31130.1| 30S ribosomal protein S4 [Streptococcus pyogenes str. Manfredo] gi|242392163|dbj|BAH82622.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|304431375|gb|EFM34372.1| 30S ribosomal protein S4 [Streptococcus pyogenes ATCC 10782] Length = 203 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|317495364|ref|ZP_07953733.1| ribosomal protein S4 [Gemella moribillum M424] gi|316914423|gb|EFV35900.1| ribosomal protein S4 [Gemella moribillum M424] Length = 200 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG + K S +GLQL+ KQK++ Sbjct: 1 MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G ++EK+FR +F +A + +G N ++ L +RLD++VY T ARQ VNH H Sbjct: 60 LHG-MNEKQFRKLFDKAGKLQGLHGENFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV+G+ V+I SY K G V+ V++KS+ L + EA ++ VPEY++ + D + + V Sbjct: 119 VLVDGKKVDIASYAVKPGQVVSVREKSRNLEIIKEAVEVTNF-VPEYLTFDADKLEGSLV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSELHP---EINEQLIVEYYSR 200 >gi|71901055|ref|ZP_00683165.1| Ribosomal protein S4, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|71729182|gb|EAO31303.1| Ribosomal protein S4, bacterial and organelle form [Xylella fastidiosa Ann-1] Length = 208 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + R PG HG RKSK S + QLR Sbjct: 1 MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K A +G+T NL+ LE+RLD ++YR F T AAR Sbjct: 58 EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171 Q V+HR VLVNG+ VN+ SY K GDV+ + Q++++ V E+ + ++ +I V+ Sbjct: 117 QLVSHRSVLVNGKMVNLPSYHVKPGDVVALSQRAQKYLCVQESLTIKDQYGSAFSWIEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +P P + L+VE YS+ Sbjct: 177 SEKFSGVFKALPDRAD---LPSDINEALIVELYSK 208 >gi|329770399|ref|ZP_08261781.1| 30S ribosomal protein S4 [Gemella sanguinis M325] gi|328836522|gb|EGF86182.1| 30S ribosomal protein S4 [Gemella sanguinis M325] Length = 200 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG + K S +GLQL+ KQK++ Sbjct: 1 MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G ++EK+FR +F +A + +G N ++ L +RLD++VY T ARQ VNH H Sbjct: 60 LHG-MNEKQFRKLFDKAGKLQGLHGANFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K G V+ V++KS+ L + EA ++ VPEY++ + D + + V Sbjct: 119 ILVDGKKVDIASYAVKPGQVVSVREKSRNLDIIKEAVEITNF-VPEYLTFDADKLEGSLV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RFPERSELHP---EINEQLIVEYYSR 200 >gi|330976664|gb|EGH76707.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 206 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQ R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +K+A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKKAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ V VNG++VN+ SY+ + GDV+ +++K+K +++A L A+R E++ V+ + Sbjct: 119 SHKSVSVNGKTVNVPSYQVRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206 >gi|224370666|ref|YP_002604830.1| RpsD [Desulfobacterium autotrophicum HRM2] gi|259495274|sp|C0Q9U8|RS4_DESAH RecName: Full=30S ribosomal protein S4 gi|223693383|gb|ACN16666.1| RpsD [Desulfobacterium autotrophicum HRM2] Length = 208 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS+ S + RR L+ + K + RSY PG HGQ R+ K S +G+QLR Sbjct: 1 MSRYRGSVCRQCRRENMKLFLKGDRCFSDKCSFDRRSYPPGQHGQ-RRMKHSDYGIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I EK+FR IFK+AD +G T L+S LE RLD +V+R F + R Sbjct: 60 KQKVRRIYG-IGEKQFRIIFKKADSLKGITGETLLSLLERRLDNVVFRLGFTSSRTQGRH 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 FV H H VNG+ VNI SY K GDV+E+K+KSK++ ++ ++ R VP+++ ++ D Sbjct: 119 FVRHNHFTVNGKKVNIPSYIIKAGDVVELKEKSKKVQAITDSLDTVVRRGVPQWLELDKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ +D+ P +Q L+VE YS+ Sbjct: 179 GFKGVVKGMPAR-EDITLP--IQEQLIVELYSK 208 >gi|56964521|ref|YP_176252.1| 30S ribosomal protein S4 [Bacillus clausii KSM-K16] gi|61215394|sp|Q5WEB9|RS4_BACSK RecName: Full=30S ribosomal protein S4 gi|56910764|dbj|BAD65291.1| 30S ribosomal protein S4 [Bacillus clausii KSM-K16] Length = 200 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG ++ K S + LQL KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGVSLSGTGKE-LAKRPYAPGQHGPNQRKKLSEYALQLHEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F F +A + G N + LESRLD +VYR T AARQ VNH H Sbjct: 60 MYG-VNERQFLRTFNDAGKMNGIHGENFMILLESRLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV+G V+I SYR K G I ++++S+ L V EA + + P Y+S + + + T+ Sbjct: 119 VLVDGSRVDIPSYRVKPGQTIGLRERSRNLTVVKEALDVNDFT-PGYVSFDEEKLEGTYT 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P + L+VE+YSR Sbjct: 178 RYPERSE---LPAEITEALIVEWYSR 200 >gi|125719124|ref|YP_001036257.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK36] gi|125499041|gb|ABN45707.1| 30S ribosomal protein S4, putative [Streptococcus sanguinis SK36] gi|325686442|gb|EGD28471.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK72] gi|325698067|gb|EGD39948.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK160] gi|327463801|gb|EGF10117.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1057] gi|327467659|gb|EGF13156.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK330] gi|327471574|gb|EGF17017.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK408] gi|328945138|gb|EGG39293.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1087] Length = 245 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 43 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 101 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + N + LE RLD +VYR T ARQFVNH Sbjct: 102 TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 160 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 161 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 219 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFY++ Sbjct: 220 TRLPERDE---INPEINEALIVEFYNK 243 >gi|171778571|ref|ZP_02919698.1| hypothetical protein STRINF_00550 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282794|gb|EDT48218.1| hypothetical protein STRINF_00550 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 203 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGSGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G T N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VE+Y++ Sbjct: 178 TRLPERDE---INPEINEALIVEYYNK 201 >gi|239947523|ref|ZP_04699276.1| ribosomal protein S4 [Rickettsia endosymbiont of Ixodes scapularis] gi|239921799|gb|EER21823.1| ribosomal protein S4 [Rickettsia endosymbiont of Ixodes scapularis] Length = 205 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 98/206 (47%), Positives = 138/206 (66%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+FR+IF A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H Sbjct: 61 HYGRVTEKQFRNIFVLAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ +I S R KEGDVIEVK+ KQ++ + E+ + P Y+S + ++ ++ Sbjct: 121 IKLNGKKADIASIRLKEGDVIEVKESVKQISLIQESVSKQGQTTPGYLSFDVPSLTGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYP + +LV+E YSR Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205 >gi|239905883|ref|YP_002952622.1| 30S ribosomal protein S4 [Desulfovibrio magneticus RS-1] gi|259495275|sp|C4XLK2|RS4_DESMR RecName: Full=30S ribosomal protein S4 gi|239795747|dbj|BAH74736.1| 30S ribosomal protein S4 [Desulfovibrio magneticus RS-1] Length = 208 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K +I RR G L+ + K R Y PG HG+ RK K S + +QLR Sbjct: 1 MARYTEAKCRICRREGAKLFLKGDRCYTDKCAHERRPYAPGQHGRIRK-KMSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK +K YG I E++FR FK AD +G T NL+S LE RLD +YR F + ARQ Sbjct: 60 KQKTRKMYG-ILEEQFRDYFKRADMQKGVTGENLLSALERRLDNTIYRLGFATSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NGR VNI S + K GDVIEV+++++Q +LEA Q +A R P ++ V + Sbjct: 119 LVRHGLFTLNGRRVNIPSLQVKVGDVIEVRERNRQSPIILEAQQVIARRGTPAWLEVEGE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+ +DV +P + L+VE YS+ Sbjct: 179 KLKGKVIALPTR-EDVQFP--INEQLIVELYSK 208 >gi|298531061|ref|ZP_07018462.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1] gi|298509084|gb|EFI32989.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1] Length = 208 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ SK ++ RR G L + K R+Y PG HG+ RK K S + LQLR Sbjct: 1 MARYTDSKCRLCRREGTKLLLKGDRCYTDKCAYERRAYPPGEHGRARK-KSSDYALQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +F+ F+ AD +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKVRRMYG-LLEGQFKRYFEIADSRKGATGTNLLVMLERRLDNVVYRMGFANSRSQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H +NG VN+ S KEGDVI V +KS+++ + +A LA R P+++ +N Sbjct: 119 LVRHGHFHINGTRVNVPSILLKEGDVIGVIEKSRKMPVIQDARDVLARRGSPDWLEINDQ 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P+ +D+ +P + L+VE YS+ Sbjct: 179 EFKGTVKTLPAR-EDITFP--INEQLIVELYSK 208 >gi|78221872|ref|YP_383619.1| 30S ribosomal protein S4 [Geobacter metallireducens GS-15] gi|90101690|sp|Q39XY0|RS4_GEOMG RecName: Full=30S ribosomal protein S4 gi|78193127|gb|ABB30894.1| SSU ribosomal protein S4P [Geobacter metallireducens GS-15] Length = 208 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + R+Y PG HGQ R K S +G+QLR Sbjct: 1 MARYTGPSCRLCRRENMELFLKGERCYTDKCAIKRRNYPPGQHGQGRP-KVSNYGIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+FRS F+EADR RG T NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVRRIYGVL-EKQFRSYFEEADRMRGVTGENLLSLLERRLDNVVYRLGFASSRTEARI 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NGR NI S + K GDV+ +K+KS+++A + E+ R P+++ ++ + Sbjct: 119 LVRHNHFTLNGRKANIPSIQLKAGDVVVLKEKSRKIACINESLDAVVRRGTPQWLELDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ +D+ P +Q L+VE YS+ Sbjct: 179 GYKGVVKLLPAR-EDIAMP--IQEQLIVELYSK 208 >gi|56808368|ref|ZP_00366123.1| COG0522: Ribosomal protein S4 and related proteins [Streptococcus pyogenes M49 591] Length = 203 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLKGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|239787587|emb|CAX84055.1| 30S ribosomal protein S4 [uncultured bacterium] Length = 208 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ SK ++ RR L+ + K + R+YGPGLHGQRR+ K S +G+ LR Sbjct: 1 MARYFGSKCRLCRREAAKLFLKGEKCYSDKCAMERRNYGPGLHGQRRR-KVSDYGVHLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ Y + EK+F + F++A R G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKIKRTYC-LLEKQFHNYFQKAARMPGVTGENLLILLERRLDNVVYRLGFSSSRSEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V+H+ +LVNG+ +NI SY K GD I V ++ K + A A R P ++ V+ Sbjct: 119 VVSHKQILVNGKPINICSYLVKPGDKIAVNEQCKAHLRIKAALDHAMRRSFPSWLEVDPV 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF+ P P NL+VE YS+ Sbjct: 179 AMSGTFLSFPDRAD---LPADYNENLIVELYSK 208 >gi|70732860|ref|YP_262627.1| 30S ribosomal protein S4 [Pseudomonas fluorescens Pf-5] gi|90101707|sp|Q4K556|RS4_PSEF5 RecName: Full=30S ribosomal protein S4 gi|68347159|gb|AAY94765.1| ribosomal protein S4 [Pseudomonas fluorescens Pf-5] Length = 206 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG+HGQRR + Y G QLR KQ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +K+A +G T NL+ LE RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-ERQFSGYYKQAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG++VN+ SY+ + GDV+ V++K+K +++A L A+R E++ V+ + Sbjct: 119 SHKSISVNGQTVNVPSYQVRAGDVVAVREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P+ + +L+VE YS+ Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206 >gi|241889823|ref|ZP_04777121.1| ribosomal protein S4 [Gemella haemolysans ATCC 10379] gi|241863445|gb|EER67829.1| ribosomal protein S4 [Gemella haemolysans ATCC 10379] Length = 200 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR+G +L G K + R Y PG HG + K S +GLQL+ KQK++ Sbjct: 1 MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G ++EK+FR +F +A + +G N ++ L +RLD++VY T ARQ VNH H Sbjct: 60 LHG-MNEKQFRKLFDKAGKLQGLHGENFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV+G+ V+I SY K G V+ V++KS+ L V EA ++ VPEY++ + D + + V Sbjct: 119 VLVDGKKVDIASYAVKPGQVVSVREKSRNLEIVKEAVEITNF-VPEYLTFDADKLEGSLV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + L+VE+YSR Sbjct: 178 RLPERSELHP---EINEQLIVEYYSR 200 >gi|118602237|ref|YP_903452.1| SSU ribosomal protein S4P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|152112257|sp|A1AVM4|RS4_RUTMC RecName: Full=30S ribosomal protein S4 gi|118567176|gb|ABL01981.1| SSU ribosomal protein S4P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 208 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 126/212 (59%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQR-RKSKPSYFGLQLRAK 55 M++ K+ RR G +L+ + ++++ PG+HG R+ K + +GLQLR K Sbjct: 1 MARYTGPTCKLARREGTDLFLKSGIRSLDSKCNVTQLPGMHGANARRQKGTEYGLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG I EK+FR +K+A + +G T NL+S LE RLD +VYR F T ARQ Sbjct: 61 QKVRRIYG-ILEKQFRLYYKKASQKKGSTGENLLSLLECRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDN 174 V+H+ +L+NG VNI SY+ D I +++K+K+ + + A +LAE+ P+++ ++H Sbjct: 120 VSHKSILMNGLVVNIPSYQVSVNDEISIREKAKKQSRIQLALELAEQSTQPQWLDIDHKA 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +P+ + +Q +L+VE YS+ Sbjct: 180 LKGVFKNVPARDE---LSSDIQEHLIVELYSK 208 >gi|218249063|ref|YP_002374434.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 8801] gi|257062150|ref|YP_003140038.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 8802] gi|226697833|sp|B7JVE5|RS4_CYAP8 RecName: Full=30S ribosomal protein S4 gi|218169541|gb|ACK68278.1| ribosomal protein S4 [Cyanothece sp. PCC 8801] gi|256592316|gb|ACV03203.1| ribosomal protein S4 [Cyanothece sp. PCC 8802] Length = 202 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+P R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLSRKNP--RRAYPPGQHGQARKKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E + K+A R+ G T L+ LE RLD V+R TI AARQ VNH H Sbjct: 58 NYG-VTEGQLIRYVKKARRATGSTGQKLLELLEMRLDNTVFRLGMAGTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNG+ V+I SY+C+ G+VI V+ + + V Q ++P ++ + + + Sbjct: 117 ITVNGKVVDIPSYQCRPGEVIAVRNQERSRRLVEANMQYPGLANLPSHLEFDKNTLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NAVIER---EWIALQINELLVVEYYSR 200 >gi|322436519|ref|YP_004218731.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX9] gi|321164246|gb|ADW69951.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX9] Length = 210 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 12/214 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPS-YFGLQLR 53 M++ ++ RR G L+ + K PV R++ PG HGQ RK K +GLQLR Sbjct: 1 MARYTGPVCRMCRRDGVKLFLKGSKCFTEKCPVEKRNFPPGQHGQSRKVKKVVGYGLQLR 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK K+ Y + E +FR+ +++A G T L+ LE+RLD + YR + AR Sbjct: 61 EKQKAKRIYFTL-ETQFRAYYQKAANKTGVTGDLLLQQLETRLDNVCYRLGLATSRRQAR 119 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V H H+ VNGR VNI S++CK GD I V++ SK L+ A A ++ +N Sbjct: 120 QVVRHGHIQVNGRKVNIPSFQCKVGDEIAVREGSKTLSFFETAKDFAGGLQSVTWLDINR 179 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D + V +P +DV PV L+VE YS+ Sbjct: 180 DTLSGKVVMLPKR-EDVQLPV--NEQLIVELYSK 210 >gi|300172651|ref|YP_003771816.1| 30S ribosomal protein S4 [Leuconostoc gasicomitatum LMG 18811] gi|299887029|emb|CBL90997.1| 30S ribosomal protein S4 [Leuconostoc gasicomitatum LMG 18811] Length = 203 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K +I RR+G +L G K ++ R+Y PG HG R++K S +G QLR KQK++ Sbjct: 1 MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F S+F +A + R T N + LE RLD++VYR T ARQ VNH Sbjct: 60 TYG-LTERQFHSLFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGLATTRQQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H++V+ + V+I S+ G VI V+ KSK + + A + P+++S + + + + Sbjct: 119 HIMVDSKRVDIPSFSVTPGQVISVRDKSKTIVPIQVAVESV-VGHPQFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + +L+VE+Y+R Sbjct: 178 VRLPEREE---LDADINESLIVEYYNR 201 >gi|46579739|ref|YP_010547.1| 30S ribosomal protein S4 [Desulfovibrio vulgaris str. Hildenborough] gi|120602784|ref|YP_967184.1| 30S ribosomal protein S4 [Desulfovibrio vulgaris DP4] gi|61215610|sp|Q72CF5|RS4_DESVH RecName: Full=30S ribosomal protein S4 gi|152060946|sp|A1VE91|RS4_DESVV RecName: Full=30S ribosomal protein S4 gi|46449154|gb|AAS95806.1| ribosomal protein S4 [Desulfovibrio vulgaris str. Hildenborough] gi|120563013|gb|ABM28757.1| SSU ribosomal protein S4P [Desulfovibrio vulgaris DP4] gi|311233530|gb|ADP86384.1| ribosomal protein S4 [Desulfovibrio vulgaris RCH1] Length = 208 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K +K + RR G L+ + K + R Y PG HG+ RK K S + +QLR Sbjct: 1 MAKYTDAKCRQCRREGTKLFLKGDRCFTDKCAFDRRPYAPGQHGRARK-KVSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E++F + F +AD ++G T NL+S LE RLD ++YR F + ARQ Sbjct: 60 KQKVRRMYG-ILEQQFHAYFTKADMAKGVTGANLLSLLERRLDNVIYRLGFANSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NGR VNI S + + GD IEV +KS+++ + EA + +A R P ++ + Sbjct: 119 LVRHGIFTLNGRKVNIPSLQVRIGDTIEVPEKSRKIPVLAEAQEVIARRGCPAWLEADGA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +P +D+ +P + +L+VE YS+ Sbjct: 179 NFRGVVKALPQR-EDIQFP--INEHLIVELYSK 208 >gi|194334835|ref|YP_002016695.1| 30S ribosomal protein S4 [Prosthecochloris aestuarii DSM 271] gi|226699104|sp|B4S5A2|RS4_PROA2 RecName: Full=30S ribosomal protein S4 gi|194312653|gb|ACF47048.1| ribosomal protein S4 [Prosthecochloris aestuarii DSM 271] Length = 203 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 121/207 (58%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R Y PG HGQ R+SK S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGVALAPKAEKYLERRPYAPGEHGQSRRSKISEYALQLREKQKMKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+ +K+A RG T NL+ LE R D +V+RA F P+ ARQ V H H Sbjct: 61 LYGVL-EKQFRNYYKKAVAQRGVTGDNLVKLLERRFDNVVFRAGFSPSRAGARQLVTHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR VNI S+ K GD IE ++KSK + +V E+ A E +P +I V+ + A F Sbjct: 120 MLVNGRKVNIPSFLMKPGDAIEFREKSKNMDAVTESLNKAPESRIPSWIQVDKAHQKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P + LVVE YS+ Sbjct: 180 LTVPEREE---VQEPFNEQLVVELYSK 203 >gi|94968282|ref|YP_590330.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis Ellin345] gi|152060923|sp|Q1IS94|RS4_ACIBL RecName: Full=30S ribosomal protein S4 gi|94550332|gb|ABF40256.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis Ellin345] Length = 209 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + ++ RR G L+ + K + R++ PG HG+ RK+K +GLQLR Sbjct: 1 MARYKDAVCRLCRREGTKLFLKGPKCFTDKCAIEKRNFAPGQHGKDRKAKIVGYGLQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ Y E +FR+ F++A + +G T L+ LE RLD +VYR F ARQ Sbjct: 61 KQKTKRMYFA-QENQFRNYFEKAAKGQGVTGEMLLQQLERRLDNVVYRLGFASARRQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+ VNG+ VNI SY+ D I V++ SK++ + + +L + VP ++ V+ D Sbjct: 120 LVRHGHIAVNGKKVNIPSYQVSVKDEIAVREGSKEMTLLGQIKELTSHTTVPGWLIVDRD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N + +P + + + L+VE YS+ Sbjct: 180 NWKGSVSSLPRRDE---IQMPVNEQLIVELYSK 209 >gi|253682663|ref|ZP_04863460.1| ribosomal protein S4 [Clostridium botulinum D str. 1873] gi|253562375|gb|EES91827.1| ribosomal protein S4 [Clostridium botulinum D str. 1873] Length = 206 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HGQ RK +Y G+QLR Sbjct: 1 MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR +++A+ RG T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLKLLEMRLDNVVYRLGFGSSRSEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I S++ GDVI V++KS+ ++ + +P ++ N +N Sbjct: 119 LVTHGHFLVNGKKVDIASFKVSAGDVITVREKSRGTEKFKTFAENP-KTLPAWLQGNVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ V + L+VE YS+ Sbjct: 178 FEGKVIAEPTRTD---IDVPVNETLIVELYSK 206 >gi|313889497|ref|ZP_07823143.1| ribosomal protein S4 [Streptococcus pseudoporcinus SPIN 20026] gi|313122109|gb|EFR45202.1| ribosomal protein S4 [Streptococcus pseudoporcinus SPIN 20026] Length = 203 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + K S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRGKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVEPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|324989545|gb|EGC21491.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK353] Length = 245 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 43 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 101 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + N + LE RLD +VYR T ARQFVNH Sbjct: 102 TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 160 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 161 HILVDGKRVDIPSYRVNPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 219 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFY++ Sbjct: 220 TRLPERDE---INPEINEALIVEFYNK 243 >gi|222153933|ref|YP_002563110.1| 30S ribosomal protein S4 [Streptococcus uberis 0140J] gi|254764614|sp|B9DWC7|RS4_STRU0 RecName: Full=30S ribosomal protein S4 gi|222114746|emb|CAR43894.1| 30S ribosomal protein S4 [Streptococcus uberis 0140J] Length = 203 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKEGTLGFNFMILLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVEPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|39997924|ref|NP_953875.1| 30S ribosomal protein S4 [Geobacter sulfurreducens PCA] gi|61215647|sp|Q749B2|RS4_GEOSL RecName: Full=30S ribosomal protein S4 gi|39984869|gb|AAR36225.1| ribosomal protein S4 [Geobacter sulfurreducens PCA] gi|307635098|gb|ADI85585.2| ribosomal protein S4 [Geobacter sulfurreducens KN400] Length = 208 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + R+Y PG HGQ R K S +G+QLR Sbjct: 1 MARYTGPSCRLCRRENMELFLKGERCYTDKCAIKRRNYPPGQHGQGRP-KVSNYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I EK+FRS F+EADR +G T NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVRRIYG-ILEKQFRSYFQEADRLKGVTGENLLSLLERRLDNVVYRLGFAASRTEARI 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NG+ NI S + + GDV+E+K+KS+++A + E+ R +P+++ + D Sbjct: 119 LVRHNHFTLNGKKANIPSIQLRAGDVVELKEKSRKIACINESLDAVVRRGIPQWLELEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +D+ P +Q L+VE YS+ Sbjct: 179 AYKGVVKTLPVR-EDITMP--IQEQLIVELYSK 208 >gi|115314194|ref|YP_762917.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica OSU18] gi|122325768|sp|Q0BNQ4|RS4_FRATO RecName: Full=30S ribosomal protein S4 gi|115129093|gb|ABI82280.1| ribosomal protein S4 [Francisella tularensis subsp. holarctica OSU18] Length = 206 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + N + PG HG R+++ S +GLQLR KQ Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E +F+ + EA R +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H+ ++VNG + N+ S + K GDV+ V++K+K+ + A +LA+ R +I VN D++ Sbjct: 119 VHKGIMVNGHTCNVPSAQVKVGDVVAVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P + + L++E YS+ Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206 >gi|315646149|ref|ZP_07899269.1| ribosomal protein S4 [Paenibacillus vortex V453] gi|315278348|gb|EFU41664.1| ribosomal protein S4 [Paenibacillus vortex V453] Length = 200 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR+G +L G K + R + PG HG ++ K S +G+QL+ KQK++ Sbjct: 1 MARYTGPKFKLSRRLGISLSGTGKE-LAKRPFPPGQHGPNQRRKVSNYGMQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F+++F +A +G N + LESRLD +VYR F + ARQ V H H Sbjct: 60 MYG-LGEKQFKTLFNKATSMKGIAGENFMFLLESRLDNLVYRLGFSNSRAGARQLVAHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SY GDVI ++++S+ L+S+ EA +P YI ++ +M ++ Sbjct: 119 VTVNGKKVDIASYAVSTGDVIGLRERSRSLSSIKEALA-NRVHLPAYIELDEASMEGKYI 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFY+R Sbjct: 178 RLPERSE---LSQDIDEKQIVEFYNR 200 >gi|116628655|ref|YP_821274.1| 30S ribosomal protein S4 [Streptococcus thermophilus LMD-9] gi|90101730|sp|Q5LXK5|RS4_STRT1 RecName: Full=30S ribosomal protein S4 gi|90101731|sp|Q5M255|RS4_STRT2 RecName: Full=30S ribosomal protein S4 gi|122266751|sp|Q03I94|RS4_STRTD RecName: Full=30S ribosomal protein S4 gi|116101932|gb|ABJ67078.1| SSU ribosomal protein S4P [Streptococcus thermophilus LMD-9] gi|312279309|gb|ADQ63966.1| 30S ribosomal protein S4 [Streptococcus thermophilus ND03] Length = 203 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGFSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SEK+FR++F +A + +G T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LSEKQFRNLFVQATKVKGGTLGFNFMILLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVE-ATIGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|309389907|gb|ADO77787.1| SSU ribosomal protein S4P [Halanaerobium praevalens DSM 2228] Length = 208 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + S K+ RR GE L+ + K + R Y PG HGQ R K S +G QLR Sbjct: 1 MGRYTGSVCKLCRREGEKLYLKGARCYSDKCSFDRRPYVPGEHGQGR-HKVSEYGTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I EK+FR+ F++A+ G T N + LE RLD +VYR F + ARQ Sbjct: 60 KQKVRRIYG-IMEKQFRNYFEKAENIAGVTGENFLQLLERRLDNVVYRMGFASSRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 FV H H+ VNGR V+I SY+ D I+VK S++ E + A+ E+++ + + Sbjct: 119 FVLHGHITVNGRKVDIPSYQIDIDDEIKVKDSSRKSKRFKEIFEYNADFASQEWLNSDLE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T + +P +D+ YPV + +L+VE+YSR Sbjct: 179 KAEGTIIALPER-EDIDYPV--EEHLIVEYYSR 208 >gi|186682136|ref|YP_001865332.1| 30S ribosomal protein S4 [Nostoc punctiforme PCC 73102] gi|226699095|sp|B2J1M8|RS4_NOSP7 RecName: Full=30S ribosomal protein S4 gi|186464588|gb|ACC80389.1| ribosomal protein S4 [Nostoc punctiforme PCC 73102] Length = 202 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KS R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRKKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ ++A R G T L+ LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-LTEKQLLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRLGIAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR VNI SY+C+ G+VI V+ +++ V Q ++P ++ + + +V Sbjct: 117 VTVNGRVVNIASYQCRPGEVIAVRDRAQSRKLVEANLQYPGLANLPSHLEFDKNKLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200 >gi|56707502|ref|YP_169398.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis SCHU S4] gi|89255694|ref|YP_513055.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica LVS] gi|110669973|ref|YP_666530.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis FSC198] gi|118496876|ref|YP_897926.1| 30S ribosomal protein S4 [Francisella tularensis subsp. novicida U112] gi|156501642|ref|YP_001427707.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010989|ref|ZP_02275920.1| ribosomal protein S4 [Francisella tularensis subsp. holarctica FSC200] gi|194324098|ref|ZP_03057872.1| ribosomal protein S4 [Francisella tularensis subsp. novicida FTE] gi|208780324|ref|ZP_03247665.1| ribosomal protein S4 [Francisella novicida FTG] gi|224456565|ref|ZP_03665038.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis MA00-2987] gi|254367075|ref|ZP_04983110.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica 257] gi|254368645|ref|ZP_04984660.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica FSC022] gi|254370809|ref|ZP_04986814.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis FSC033] gi|254372233|ref|ZP_04987724.1| 30S ribosomal protein S4 [Francisella tularensis subsp. novicida GA99-3549] gi|254373715|ref|ZP_04989198.1| 30S ribosomal protein S4 [Francisella novicida GA99-3548] gi|254874322|ref|ZP_05247032.1| 30S ribosomal protein S4 rpsD [Francisella tularensis subsp. tularensis MA00-2987] gi|290953189|ref|ZP_06557810.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica URFT1] gi|295313557|ref|ZP_06804146.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica URFT1] gi|61215374|sp|Q5NHU4|RS4_FRATT RecName: Full=30S ribosomal protein S4 gi|122501251|sp|Q2A5E6|RS4_FRATH RecName: Full=30S ribosomal protein S4 gi|123359595|sp|Q14J96|RS4_FRAT1 RecName: Full=30S ribosomal protein S4 gi|152060948|sp|A0Q4K7|RS4_FRATN RecName: Full=30S ribosomal protein S4 gi|171769925|sp|A7N9U8|RS4_FRATF RecName: Full=30S ribosomal protein S4 gi|54113157|gb|AAV29212.1| NT02FT0049 [synthetic construct] gi|56603994|emb|CAG44982.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis SCHU S4] gi|89143525|emb|CAJ78701.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica LVS] gi|110320306|emb|CAL08365.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis FSC198] gi|118422782|gb|ABK89172.1| 30S ribosomal protein S4 [Francisella novicida U112] gi|134252900|gb|EBA51994.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica 257] gi|151569052|gb|EDN34706.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis FSC033] gi|151569962|gb|EDN35616.1| 30S ribosomal protein S4 [Francisella novicida GA99-3549] gi|151571436|gb|EDN37090.1| 30S ribosomal protein S4 [Francisella novicida GA99-3548] gi|156252245|gb|ABU60751.1| ribosomal protein S4 [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121553|gb|EDO65738.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica FSC022] gi|194321545|gb|EDX19029.1| ribosomal protein S4 [Francisella tularensis subsp. novicida FTE] gi|208743692|gb|EDZ89995.1| ribosomal protein S4 [Francisella novicida FTG] gi|254840321|gb|EET18757.1| 30S ribosomal protein S4 rpsD [Francisella tularensis subsp. tularensis MA00-2987] gi|282158646|gb|ADA78037.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis NE061598] gi|328675431|gb|AEB28106.1| SSU ribosomal protein S4p (S9e) [Francisella cf. novicida 3523] gi|328676345|gb|AEB27215.1| SSU ribosomal protein S4p (S9e) [Francisella cf. novicida Fx1] Length = 206 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + N + PG HG R+++ S +GLQLR KQ Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E +F+ + EA R +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H+ ++VNG + N+ S + K GDV+ V++K+K+ + A +LA+ R +I VN D++ Sbjct: 119 VHKGIMVNGHTCNVPSAQVKAGDVVAVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P + + L++E YS+ Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206 >gi|134302562|ref|YP_001122532.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis WY96-3418] gi|152060949|sp|A4IZR0|RS4_FRATW RecName: Full=30S ribosomal protein S4 gi|134050339|gb|ABO47410.1| ribosomal protein S4 [Francisella tularensis subsp. tularensis WY96-3418] Length = 206 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + N + PG HG R+++ S +GLQLR KQ Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E +F+ + EA R +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H+ ++VNG + N+ S + K GDV+ V++K+K+ + A +LA+ R +I VN D++ Sbjct: 119 VHKGIMVNGHTCNVPSAQVKAGDVVTVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P + + L++E YS+ Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206 >gi|331268441|ref|YP_004394933.1| 30S ribosomal protein S4 [Clostridium botulinum BKT015925] gi|329124991|gb|AEB74936.1| ribosomal protein S4 [Clostridium botulinum BKT015925] Length = 206 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HGQ RK +Y G+QLR Sbjct: 1 MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR +++A+ RG T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLRLLEMRLDNVVYRLGFGSSRSEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I S++ GDVI V++KS+ ++ + +P ++ N +N Sbjct: 119 LVTHGHFLVNGKKVDIASFKVSAGDVITVREKSRGTEKFKTFAENP-KTLPAWLQGNVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ V + L+VE YS+ Sbjct: 178 FEGKVIAEPTRTD---IDVPVNETLIVELYSK 206 >gi|94995345|ref|YP_603443.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS10750] gi|152112267|sp|Q1J462|RS4_STRPF RecName: Full=30S ribosomal protein S4 gi|94548853|gb|ABF38899.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS10750] Length = 203 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGAL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|302877826|ref|YP_003846390.1| 30S ribosomal protein S4 [Gallionella capsiferriformans ES-2] gi|302580615|gb|ADL54626.1| ribosomal protein S4 [Gallionella capsiferriformans ES-2] Length = 209 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K + RR GE L+ + K V R+Y PG HGQRR ++ S +G QLR Sbjct: 1 MARNLDAKCRKCRREGEKLFLKGEKCFTDKCAVERRAYPPGQHGQRRNTRLSEYGGQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++FR +K+A+ SRG T +L+ LESRLD + YR F + ARQ Sbjct: 61 KQKVRRIYGVL-ERQFRLTYKKAEASRGITGESLLQLLESRLDNVSYRMGFGASRAEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H +LVNG+ VNI SY+ + GDV+EV +KSK + A AE R PE+I ++ Sbjct: 120 VVRHNALLVNGKRVNIPSYQVRPGDVVEVAEKSKAQLRIKAAIAAAETRGFPEWIEMDTK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + P + +LVVE YS+ Sbjct: 180 AFKGTFKANPQRAE---LPATINEHLVVELYSK 209 >gi|119358165|ref|YP_912809.1| 30S ribosomal protein S4 [Chlorobium phaeobacteroides DSM 266] gi|152060943|sp|A1BJ08|RS4_CHLPD RecName: Full=30S ribosomal protein S4 gi|119355514|gb|ABL66385.1| SSU ribosomal protein S4P [Chlorobium phaeobacteroides DSM 266] Length = 203 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R + PG HGQ RK K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGIALSPKAEKYLERRPFAPGQHGQSRKGKISEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E +FRS +++A RG T NL+ LE R D +V+R+ F + AARQ V H H Sbjct: 61 LYGVL-ENQFRSYYRKAVSQRGVTGDNLVKLLERRFDNVVFRSGFAASRSAARQLVTHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 + +NG+ VNI SY G++IE +QKSK + +V ++ A + +P +I V+ N A F Sbjct: 120 LTINGKKVNIPSYLLTPGELIEFRQKSKNMGAVTDSLNKAPDARIPSWIQVDKANQKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P + LVVE YS+ Sbjct: 180 LSVPEREE---VQEPFNEQLVVELYSK 203 >gi|46911985|emb|CAG18783.1| putative ribosomal protein S4 [Photobacterium profundum SS9] Length = 202 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 124/207 (59%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG R+ + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V+H+ Sbjct: 60 TYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGSTRAESRQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNG VN+ S++ DV+ +++K+K A + A ++A +R++P ++ V++ + TF Sbjct: 119 ILVNGTVVNVPSFKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDNSKLEGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + +L+VE YS+ Sbjct: 179 KRLPERSD---LSADINEHLIVELYSK 202 >gi|323144988|ref|ZP_08079548.1| ribosomal protein S4 [Succinatimonas hippei YIT 12066] gi|322415267|gb|EFY06041.1| ribosomal protein S4 [Succinatimonas hippei YIT 12066] Length = 207 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K+ RR G +L+ + + T+ PG HG K + S +G+QLR KQ Sbjct: 1 MAKYTGPALKLSRREGVDLFLKSGVRAIETKCKLDTAPGQHGAN-KPRLSDYGMQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +K+A + G+T NL+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKKAAKMSGNTGENLLQLLESRLDNVVYRMGFGSTRMEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDN 174 +H+ + VN VNI SY+ + DVI V++K+K+ + A L+ + P +I V+H+ Sbjct: 119 SHKAITVNDHVVNIPSYQVQPSDVIAVREKAKKQLRIKAAIDLSGQRALKPTWIDVDHNA 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M T+ P + P ++ L+VE YS+ Sbjct: 179 MKGTYKNKPERSE---LPSDIKEQLIVELYSK 207 >gi|51473540|ref|YP_067297.1| 30S ribosomal protein S4 [Rickettsia typhi str. Wilmington] gi|61215500|sp|Q68X27|RS4_RICTY RecName: Full=30S ribosomal protein S4 gi|51459852|gb|AAU03815.1| 30S ribosomal protein S4 [Rickettsia typhi str. Wilmington] Length = 205 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 96/206 (46%), Positives = 137/206 (66%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG ++EK+FR+ F A R +G+T N I LESRLDT+VYR PTIFAARQ V+H H Sbjct: 61 YYGRVTEKQFRNTFALAQRMQGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ +I S R KEGD+IE+K+ +Q+ + E+ + P+Y+S + ++ ++ Sbjct: 121 IKLNGKKADIASIRLKEGDIIEIKESIQQIPLIQESIAKQGQTTPKYLSFDVSSLTGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYP + +LV+E YSR Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205 >gi|124268602|ref|YP_001022606.1| 30S ribosomal protein S4 [Methylibium petroleiphilum PM1] gi|152112230|sp|A2SLD2|RS4_METPP RecName: Full=30S ribosomal protein S4 gi|124261377|gb|ABM96371.1| SSU ribosomal protein S4P [Methylibium petroleiphilum PM1] Length = 207 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + KS T+ PG HG+ S+ S FGLQLR Sbjct: 1 MARYLGPKAKLARREGTDLFLKSARRAIGDKSKFETK---PGQHGRTSGSRTSDFGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EA+R +G+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-ERQFRRYFAEAERRKGNTGANLLLLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q V+H+ + VNG VNI SY K GDV+ V++K+K+ V E+ +LAE +P ++ V+ Sbjct: 117 QLVSHKGITVNGEVVNIASYLVKTGDVVAVREKAKKQLRVTESLKLAESMGLPAWVQVDA 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F + P + + + +L+VE YSR Sbjct: 177 TKLEGVFKKSPDRDE---FGSDINESLIVELYSR 207 >gi|325104842|ref|YP_004274496.1| SSU ribosomal protein S4P [Pedobacter saltans DSM 12145] gi|324973690|gb|ADY52674.1| SSU ribosomal protein S4P [Pedobacter saltans DSM 12145] Length = 202 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ E ++G K + ++Y PG HG +R+ K S + +QL KQK+K Sbjct: 1 MARYTGPKSKIARKFREPIFGPDK-ALERKNYPPGQHGPSKRRGKQSEYSIQLTEKQKVK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+F ++FK+A G NL+ LE+RLD +VYR T AARQ V+HR Sbjct: 60 YTYGVL-EKQFSNLFKKASAKGGIAGTNLLQLLEARLDNVVYRLGIATTRSAARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LVNG VNI S+ + GDVIEV++KSK L ++ + + ++ + N+ F Sbjct: 119 HILVNGELVNIPSFSVRPGDVIEVREKSKSLEAITNSVAGRTINKYSWLEWDSKNLTGKF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P P ++ NL+VE YS+ Sbjct: 179 IQFPDR---ESIPENIKENLIVELYSK 202 >gi|227510162|ref|ZP_03940211.1| 30S ribosomal protein S4 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190367|gb|EEI70434.1| 30S ribosomal protein S4 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 231 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G +L G K ++ R Y PG HGQ R+ K S +GLQL+ KQK++ Sbjct: 29 MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRQKLSEYGLQLKEKQKLRY 87 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + R N + LE RLD IVYR T ARQ VNH Sbjct: 88 MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLERRLDNIVYRLGLATTRRQARQLVNHG 146 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G V+ V++KSK L V +A + A P+Y+S + D + + Sbjct: 147 HITVDGKRVDIPSYEVKPGQVVSVREKSKDLQVVKDAVE-AVVGRPQYVSFDADKLEGSL 205 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + +L+VE+Y++ Sbjct: 206 VRLPQREE---LDADIDESLIVEYYNK 229 >gi|187734944|ref|YP_001877056.1| ribosomal protein S4 [Akkermansia muciniphila ATCC BAA-835] gi|226697794|sp|B2UNG3|RS4_AKKM8 RecName: Full=30S ribosomal protein S4 gi|187424996|gb|ACD04275.1| ribosomal protein S4 [Akkermansia muciniphila ATCC BAA-835] Length = 203 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 7/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 M++ + K+ RR G L+G K + R + PG HG R + K S +G+ L KQK++ Sbjct: 1 MARYTGPRDKVSRRFGVALFGSTK-ALEKRPFPPGQHGMRAGRKKKSDYGVMLAEKQKLR 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E +FR + EA R RG T L+ LE RLD +VYR F T ARQ V+H Sbjct: 60 FQYGVL-EGQFRKYYAEAARRRGITGDILLQLLELRLDNVVYRLGFSNTRAGARQLVSHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVAT 178 H+ VNG+ NI SY C+ GDVI V K+ V L + VP+++ + D + Sbjct: 119 HITVNGKKTNIASYSCRPGDVIAVGGKASSQQLVTRFLDLTQATVVPDWLECDRDKLTGK 178 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+PS + P + L+VEFYSR Sbjct: 179 IARVPSKEEIAPI---VNEQLIVEFYSR 203 >gi|119478108|ref|ZP_01618187.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2143] gi|119448814|gb|EAW30057.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2143] Length = 206 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + P++++ PG+HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPTCKLSRREGTDLFLKSGVRPLDSKCKAEAPPGVHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G T NL+ LESRLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 H+ +L+N + VNI SY+ K GD + V++K+K V +A +L A+R E+I VN NM Sbjct: 119 AHKSILINDKVVNIASYQVKAGDKVSVREKAKSQLRVKQAIELAAQRGDAEWIEVNVSNM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ P + +L+VE YS+ Sbjct: 179 EGTYKAKPDRAD---LSSEINESLIVELYSK 206 >gi|224373704|ref|YP_002608076.1| 30S ribosomal protein S4 [Nautilia profundicola AmH] gi|254764602|sp|B9L6T8|RS4_NAUPA RecName: Full=30S ribosomal protein S4 gi|223590010|gb|ACM93746.1| ribosomal protein S4 [Nautilia profundicola AmH] Length = 208 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR+G +L + KS ++ R Y PG HGQ R++K S +GLQLR Sbjct: 1 MARYTGPVEKIERRLGVSLELKGERRLAGKSALDKRPYAPGQHGQ-RRTKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K YYG + EK+FR F+EA+R G+T NLI LE RLD +VYR F T ARQ Sbjct: 60 KQKIKFYYGVL-EKQFRKFFREANRQEGNTGENLIKLLERRLDNVVYRMGFASTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V H H+LVNG+ VNI SY KEGD IE+++KSK + A +L+++ + ++ V+ + Sbjct: 119 LVTHGHILVNGKKVNIPSYLVKEGDRIEIREKSKNNVQIQRALELSQQTGIAPWVDVDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +V F R+P + + ++ LVVE YS+ Sbjct: 179 KLVGVFQRVPEREE---VNIPVEERLVVELYSK 208 >gi|300857220|ref|YP_003782204.1| 30S ribosomal protein S4 [Clostridium ljungdahlii DSM 13528] gi|300437335|gb|ADK17102.1| 30S ribosomal protein S4 [Clostridium ljungdahlii DSM 13528] Length = 206 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR G L+ + K + R Y PG HGQRRK K S +GLQLR Sbjct: 1 MARYTGSVCRLCRREGLKLFLKGDRCYTDKCAFSRRGYAPGQHGQRRK-KVSNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR ++ ADR +G T NL+ LE+RLD ++YR + + ARQ Sbjct: 60 KQKAKRIYG-LLEGQFRKYYETADRKKGITGENLLVLLETRLDNVIYRLGYGQSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNGR V+I S++ D I V KSK ++ + +P ++ N +N Sbjct: 119 LVTHGHFLVNGRKVDIPSFKVSVNDNITVSDKSKSSEKFKTFAENP-KTLPSWLEGNVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A +R P+ +D+ PV L+VE YS+ Sbjct: 178 FQAKVLRQPTR-EDIDVPV--NETLIVELYSK 206 >gi|328953131|ref|YP_004370465.1| ribosomal protein S4 [Desulfobacca acetoxidans DSM 11109] gi|328453455|gb|AEB09284.1| ribosomal protein S4 [Desulfobacca acetoxidans DSM 11109] Length = 208 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR L+ + K SY PG HGQ R +K S FG+QLR Sbjct: 1 MARYRESVCRLCRRERMKLFLKGDRCYTDKCAFERHSYPPGQHGQGR-AKFSDFGIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+FRS F ADR +G T NL++ LE RLD +VYR F + ARQ Sbjct: 60 KQKVRRMYG-LLEKQFRSYFAAADRQKGITGANLLTLLERRLDNVVYRLGFANSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173 V H H LVNG+ +NI SY GD IE+K+KS+++ + EA +A R +P+++ V+ + Sbjct: 119 LVRHNHFLVNGKKINIPSYLVNVGDTIELKEKSRKILQIAEALGAVARRGIPQWLEVDTE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +PS +DV P +Q +L+VE YS+ Sbjct: 179 NFRGIIRLMPSR-EDVTMP--IQEHLIVELYSK 208 >gi|302876506|ref|YP_003845139.1| 30S ribosomal protein S4 [Clostridium cellulovorans 743B] gi|307687178|ref|ZP_07629624.1| 30S ribosomal protein S4 [Clostridium cellulovorans 743B] gi|302579363|gb|ADL53375.1| ribosomal protein S4 [Clostridium cellulovorans 743B] Length = 206 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR GE L + K + R Y PG HGQ +K +Y G+QLR Sbjct: 1 MARYTGPVCRLCRREGEKLNLKGDRCFTDKCAFDRRGYAPGQHGQSKKKLSNY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR + +AD+ RG T NL+ LE RLD ++YR + + ARQ Sbjct: 60 KQKAKRIYGVL-ENQFRRTYDKADKMRGITGENLVKLLEMRLDNVIYRLGYGNSRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY K GDVI V++KS+ + ++ R +P ++S + Sbjct: 119 LVTHGHFLVNGKKVDIPSYVVKAGDVITVREKSRATETFKTFAENP-RVLPAWLSGDIAT 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V PS +D+ P+ L+VE YS+ Sbjct: 178 FEGKVVTAPSR-EDIDVPL--NETLIVELYSK 206 >gi|15604213|ref|NP_220728.1| 30S ribosomal protein S4 [Rickettsia prowazekii str. Madrid E] gi|6226104|sp|Q9ZDI3|RS4_RICPR RecName: Full=30S ribosomal protein S4 gi|3860905|emb|CAA14805.1| 30S RIBOSOMAL PROTEIN S4 (rpsD) [Rickettsia prowazekii] gi|292571953|gb|ADE29868.1| 30S ribosomal protein S4 [Rickettsia prowazekii Rp22] Length = 205 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 97/206 (47%), Positives = 137/206 (66%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG ++EK+FR+IF A R +G+T N I LESRLDT+VYR PTIFAARQ V+H H Sbjct: 61 YYGRVTEKQFRNIFALAQRMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ +I S R KEGD+IE+K+ +Q+ + E+ + P Y+S + ++ ++ Sbjct: 121 IKLNGKKADIASIRLKEGDIIEIKESIQQIPLIQESISKQGQTTPGYLSFDIPSLTGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYP + +LV+E YSR Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205 >gi|301021164|ref|ZP_07185202.1| ribosomal protein S4 [Escherichia coli MS 196-1] gi|312972443|ref|ZP_07786617.1| ribosomal protein S4 [Escherichia coli 1827-70] gi|30043665|gb|AAP19385.1| 30S ribosomal subunit protein S4 [Shigella flexneri 2a str. 2457T] gi|299881640|gb|EFI89851.1| ribosomal protein S4 [Escherichia coli MS 196-1] gi|310334820|gb|EFQ01025.1| ribosomal protein S4 [Escherichia coli 1827-70] gi|315617098|gb|EFU97708.1| ribosomal protein S4 [Escherichia coli 3431] gi|320187017|gb|EFW61729.1| SSU ribosomal protein S4p (S9e) [Shigella flexneri CDC 796-83] gi|320191670|gb|EFW66320.1| SSU ribosomal protein S4p (S9e) [Escherichia coli O157:H7 str. EC1212] gi|320195388|gb|EFW70015.1| SSU ribosomal protein S4p (S9e) [Escherichia coli WV_060327] gi|320199483|gb|EFW74073.1| SSU ribosomal protein S4p (S9e) [Escherichia coli EC4100B] gi|323154134|gb|EFZ40337.1| ribosomal protein S4 [Escherichia coli EPECa14] gi|323179168|gb|EFZ64742.1| ribosomal protein S4 [Escherichia coli 1180] gi|323182774|gb|EFZ68175.1| ribosomal protein S4 [Escherichia coli 1357] gi|325498865|gb|EGC96724.1| ribosomal protein S4 [Escherichia fergusonii ECD227] gi|326342544|gb|EGD66318.1| SSU ribosomal protein S4p (S9e) [Escherichia coli O157:H7 str. 1044] gi|326344531|gb|EGD68280.1| SSU ribosomal protein S4p (S9e) [Escherichia coli O157:H7 str. 1125] gi|330909340|gb|EGH37854.1| SSU ribosomal protein S4p (S9e) [Escherichia coli AA86] gi|332085445|gb|EGI90611.1| ribosomal protein S4 [Shigella boydii 5216-82] Length = 202 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 124/207 (59%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M TF Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + +L+VE YS+ Sbjct: 179 KRKPERSD---LSADINEHLIVELYSK 202 >gi|329117696|ref|ZP_08246413.1| ribosomal protein S4 [Streptococcus parauberis NCFD 2020] gi|326908101|gb|EGE55015.1| ribosomal protein S4 [Streptococcus parauberis NCFD 2020] Length = 203 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQAIKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDTEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|262197163|ref|YP_003268372.1| ribosomal protein S4 [Haliangium ochraceum DSM 14365] gi|262080510|gb|ACY16479.1| ribosomal protein S4 [Haliangium ochraceum DSM 14365] Length = 209 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 116/213 (54%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + RSY PG HGQ R+ K S +G QLR Sbjct: 1 MARYTGPVCRLCRREEMKLFLKGERCYTEKCGYDRRSYPPGQHGQSRRRKRSDYGEQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG I+E++FR + A R +G T NLI LE RLD +VYR F ARQ Sbjct: 61 KQKVKRIYG-IAERQFRGYYHRASRMKGVTGENLIQLLERRLDNVVYRMGFACDHAEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H L++GR VNI SY + G ++VK+KS+ + ++E+ E R VP +I + D Sbjct: 120 LVLHGHFLIDGRRVNIPSYLIRSGQTVQVKEKSRTVTRIVESLGAVERRGVPVWIDLEKD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +PS + ++ L+VE YS+ Sbjct: 180 AFKGSVKALPSRSD---VSLDIREQLIVELYSK 209 >gi|228478099|ref|ZP_04062710.1| ribosomal protein S4 [Streptococcus salivarius SK126] gi|312864106|ref|ZP_07724341.1| ribosomal protein S4 [Streptococcus vestibularis F0396] gi|322374008|ref|ZP_08048542.1| ribosomal protein S4 [Streptococcus sp. C150] gi|322515823|ref|ZP_08068767.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124] gi|228250279|gb|EEK09532.1| ribosomal protein S4 [Streptococcus salivarius SK126] gi|311100338|gb|EFQ58546.1| ribosomal protein S4 [Streptococcus vestibularis F0396] gi|321276974|gb|EFX54045.1| ribosomal protein S4 [Streptococcus sp. C150] gi|322125709|gb|EFX97031.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124] Length = 203 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGFSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVE-ATIGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|239618238|ref|YP_002941560.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1] gi|259495284|sp|C5CGH5|RS4_KOSOT RecName: Full=30S ribosomal protein S4 gi|239507069|gb|ACR80556.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1] Length = 208 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + PK V R + PG HG + Y G+QLR+ Sbjct: 1 MARYTGPVCKLCRREGFKLYLKGERCFTPKCAVVKRPFAPGQHGSATRKLTQY-GMQLRS 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ +K+ YG + EK+FR F+ A R +T LI LESRLD +VYR F + ARQ Sbjct: 60 KQALKRMYGVL-EKQFRRYFEIASRKSEETGTALIKVLESRLDNVVYRMGFASSRKQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V+H HVLVNGR VN SY + GD+IE+K+KSK V EA + + R P ++ ++ D Sbjct: 119 LVSHGHVLVNGRKVNKASYSVRPGDIIEIKEKSKAKVPVKEAIEASRNRTTPPWLEIDFD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TFVR P ++V PV +Q ++E YS+ Sbjct: 179 AARGTFVRFPER-EEVDIPVDLQS--IIELYSK 208 >gi|293400755|ref|ZP_06644900.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305781|gb|EFE47025.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 200 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 124/206 (60%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G ++ + R+Y PG HG ++ K + +GLQLR KQK++ Sbjct: 1 MSRVKGPVWKTSRRLGFSI-LETGEELQKRAYAPGQHGPTKRVKLTNYGLQLREKQKIRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F ++F +A + +G T N ++ LESRLD +VYR F T AARQ VNH H Sbjct: 60 MYG-LNERQFHNLFVKASKMKGVTGENFLNLLESRLDNLVYRLGFARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I S+ K G IEVK+KSK LA++ EA + V ++ V+ D T++ Sbjct: 119 ILVNGKKVDIPSFIVKPGTTIEVKEKSKNLAAINEALEACLNTV-AFVDVDKDAKKGTYL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY+R Sbjct: 178 RLPERSE---LNQEVNELLVVEFYNR 200 >gi|89891131|ref|ZP_01202639.1| 30S ribosomal protein S4 [Flavobacteria bacterium BBFL7] gi|89516775|gb|EAS19434.1| 30S ribosomal protein S4 [Flavobacteria bacterium BBFL7] Length = 201 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 126/207 (60%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI RR E ++G K + ++Y PG+HG RR+ K S + +QL+ KQK K Sbjct: 1 MARYRGPKAKIARRFREPIFGPSK-ALEKKNYPPGMHGNARRRGKESEYAVQLKEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR +F++A RS G T L+ ESRLD +VYR T ARQ V+HR Sbjct: 60 YTYGVL-EKQFRLMFEKAVRSTGITGEVLLQLCESRLDNVVYRMGIAKTRRGARQLVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY+ K GDV+ V++KSK L+++ ++ E V ++I+ N +M TF Sbjct: 119 HMTVNGELVNIPSYQLKPGDVVAVREKSKSLSAIDQSLSSNEH-VYDFITFNKASMSGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P L+ P ++ L+VE YS+ Sbjct: 178 VSVPERLQ---IPENIKEQLIVELYSK 201 >gi|124003687|ref|ZP_01688535.1| ribosomal protein S4 [Microscilla marina ATCC 23134] gi|123990742|gb|EAY30209.1| ribosomal protein S4 [Microscilla marina ATCC 23134] Length = 200 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE + G K + ++Y PG HG+ R+ K S + +QL+AKQK+K Sbjct: 1 MARYRGPKSKISRKFGEPIMGPSK-ALQKKAYPPGQHGKGRRKKQSEYAIQLQAKQKVKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++F ++F +A +G T NL+ FLE+RLD VYR PT AARQ V H+H Sbjct: 60 IYGVL-ERQFANLFDKAAGKQGITGENLLKFLEARLDNTVYRLGIAPTRRAARQLVIHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG N+ SY K GD++ V++KSK L V E+ + ++ + M F+ Sbjct: 119 ITVNGEVANVPSYSLKPGDIVGVREKSKSLEVVTESLMSNSKRF-NWLEWDSTMMAGKFL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + P +Q L+VE YS+ Sbjct: 178 SYPERDQ---IPEKVQEQLIVELYSK 200 >gi|157803917|ref|YP_001492466.1| 30S ribosomal protein S4 [Rickettsia canadensis str. McKiel] gi|172045657|sp|A8EZ98|RS4_RICCK RecName: Full=30S ribosomal protein S4 gi|157785180|gb|ABV73681.1| 30S ribosomal protein S4 [Rickettsia canadensis str. McKiel] Length = 205 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 97/206 (47%), Positives = 138/206 (66%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K N R+Y PG HGQ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDSKDAFNIRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+FR+IF+ A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H Sbjct: 61 HYGRVTEKQFRNIFELAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ +I S R KEGDV+EVK+ KQ+A + E+ + P Y+S + ++ ++ Sbjct: 121 IKLNGKKADIASIRLKEGDVVEVKESIKQIALIQESILKQGQTTPNYLSFDVPSLTGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ L DVPYP + +LV+E YSR Sbjct: 181 RVPN-LSDVPYPFEAEVHLVIELYSR 205 >gi|78484663|ref|YP_390588.1| ribosomal protein S4 [Thiomicrospira crunogena XCL-2] gi|90101733|sp|Q31IV9|RS4_THICR RecName: Full=30S ribosomal protein S4 gi|78362949|gb|ABB40914.1| SSU ribosomal protein S4P [Thiomicrospira crunogena XCL-2] Length = 206 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ PG HG RK Y GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSGVRSIESKCKIDQLPGQHGAGRKRVTEY-GLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EKKFR +KEADR +G T NL+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKKFRLYYKEADRRKGSTGVNLLQLLESRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ + VNG+SVNI SY GDVI +++KS+ + + A +L A+ ++ V+ Sbjct: 119 SHKSIQVNGQSVNIPSYEVSAGDVISIREKSRNQSRIAAALELSAQAGNVGWVEVDSSKF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + NL+VE YS+ Sbjct: 179 EGVFKTVPDRSD---LSADISENLIVELYSK 206 >gi|241895757|ref|ZP_04783053.1| ribosomal protein S4 [Weissella paramesenteroides ATCC 33313] gi|241870800|gb|EER74551.1| ribosomal protein S4 [Weissella paramesenteroides ATCC 33313] Length = 203 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+++ RR+G +L G K + R+Y PG HG R+SKPS +G+QL KQK++ Sbjct: 1 MSRYTGPKYRLSRRLGVSLSGTGKE-LARRNYAPGDHGAGRRSKPSDYGIQLAEKQKVRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F +A + R T N +S LE RLD IVYR T ARQ VNH Sbjct: 60 TYG-MTERQFHNLFLKAGKIRKGTHGDNFMSLLERRLDNIVYRLGLASTRQQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY G I V++KS++ + A + +P ++ + D + T Sbjct: 119 HILVDGKRVDIPSYEVSVGQEISVREKSQKNVYIQAAVEAQAGTLP-FVEFDKDTLKGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + L+VE+Y+R Sbjct: 178 VREPERAE---LDHEYNEALIVEYYNR 201 >gi|152998247|ref|YP_001343082.1| 30S ribosomal protein S4 [Marinomonas sp. MWYL1] gi|189045385|sp|A6W368|RS4_MARMS RecName: Full=30S ribosomal protein S4 gi|150839171|gb|ABR73147.1| ribosomal protein S4 [Marinomonas sp. MWYL1] Length = 206 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS-PVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L + S + ++ PG+HG RR Y GLQLR KQ Sbjct: 1 MARYIGPTCKLSRREGTDLQLKSGSRALESKCKVETVPGVHGARRGRLSEY-GLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I EK+FR+ +K A R +G T NL+ LESRLD +VYRA F T ARQ V Sbjct: 60 KVRRMYG-ILEKQFRNYYKSAARLKGATGENLLQLLESRLDNVVYRAGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 H+ +LVNG +VNI SY+ K GDV+ +++K+K+ V A +L++ P +I V+ + Sbjct: 119 GHKGILVNGATVNIPSYQVKAGDVVSIREKAKKQLRVQSALELSKGRAPIHWIEVDSTKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT+ +P + NL+VE YS+ Sbjct: 179 EATYKALPERAD---LSAEINENLIVELYSK 206 >gi|291613261|ref|YP_003523418.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1] gi|291583373|gb|ADE11031.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1] Length = 209 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K + RR GE L+ + K V R+Y PG HGQ++ + S +G QLR Sbjct: 1 MARNLDAKCRQCRREGEKLFLKAEKCFTDKCSVERRAYAPGQHGQKKNQRQSEYGGQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR +K A++SRG T +L+ LESRLD + YR F + ARQ Sbjct: 61 KQKLRRIYGMM-EGQFRLTYKRAEQSRGITGESLLQMLESRLDNVSYRMGFGASRSEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H +LVNG+ VNI SY+ + GDV+EV +KS+ V A Q AE R PE++ V+ Sbjct: 120 VVRHNSILVNGKRVNIPSYQVRPGDVVEVAEKSRNQLRVKAALQAAEQRGFPEWLEVDAK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + P + +LVVE YS+ Sbjct: 180 AFKGTFKAVPQRSE---LPATINEHLVVELYSK 209 >gi|189501185|ref|YP_001960655.1| 30S ribosomal protein S4 [Chlorobium phaeobacteroides BS1] gi|226697822|sp|B3EP35|RS4_CHLPB RecName: Full=30S ribosomal protein S4 gi|189496626|gb|ACE05174.1| ribosomal protein S4 [Chlorobium phaeobacteroides BS1] Length = 203 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R Y PG HGQ R+ K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGVALSPKAEKYLEKRPYAPGEHGQSRRGKVSEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+ +K+A RG T NL+ LE R D +V+RA F P+ ARQ V H H Sbjct: 61 LYGVL-EKQFRNYYKKAVSQRGITGDNLVKLLERRFDNVVFRAGFSPSRAGARQLVTHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +L+NG+ V+I SY K GD +E +QKS+ L +V ++ A + +P +I V+ + A F Sbjct: 120 LLINGKKVDIPSYLLKPGDAMEFRQKSQNLDAVADSMNRAPDSRIPSWIQVDKAHKKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P + LVVE YS+ Sbjct: 180 LAVPEREE---VQEPFNEQLVVELYSK 203 >gi|33594506|ref|NP_882150.1| 30S ribosomal protein S4 [Bordetella pertussis Tohama I] gi|33594777|ref|NP_882420.1| 30S ribosomal protein S4 [Bordetella parapertussis 12822] gi|33599049|ref|NP_886609.1| 30S ribosomal protein S4 [Bordetella bronchiseptica RB50] gi|61236218|sp|P0A4C5|RS4_BORPE RecName: Full=30S ribosomal protein S4 gi|61236221|sp|P0A4C6|RS4_BORBR RecName: Full=30S ribosomal protein S4 gi|61236225|sp|P0A4C7|RS4_BORPA RecName: Full=30S ribosomal protein S4 gi|33564582|emb|CAE43898.1| 30S ribosomal protein S4 [Bordetella pertussis Tohama I] gi|33564853|emb|CAE39797.1| 30S ribosomal protein S4 [Bordetella parapertussis] gi|33575095|emb|CAE30558.1| 30S ribosomal protein S4 [Bordetella bronchiseptica RB50] Length = 207 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++++ PG HG+ ++ S +GLQLR KQ Sbjct: 1 MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T ARQ V Sbjct: 61 KLKRMYGVL-EKQFRKYFVEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +HR + +NG + +I S K GDVI +++K+K+ + E+ LA +P+++ V+ M Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVISIREKAKKQGRIRESLDLAASIGLPQWVEVDASKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + ++VVE YSR Sbjct: 180 TGTFKSAPDRAD---VARDVNESMVVELYSR 207 >gi|209560256|ref|YP_002286728.1| 30S ribosomal protein S4 [Streptococcus pyogenes NZ131] gi|226695085|sp|B5XJ99|RS4_STRPZ RecName: Full=30S ribosomal protein S4 gi|209541457|gb|ACI62033.1| SSU ribosomal protein S4p (S9e) [Streptococcus pyogenes NZ131] Length = 203 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++ +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLVVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLKGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|152112239|sp|Q04E66|RS4_OENOB RecName: Full=30S ribosomal protein S4 Length = 204 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ K ++ RR+G +L G K + R Y PG HG R+ K S + QLR KQK++ Sbjct: 1 MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 59 Query: 60 KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +SE++F ++F +A + +G N LE+RLD++V+R T ARQ VNH Sbjct: 60 FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+LV+G+ V I SY K G +I V+++SK++ +L + + + + P ++ + D + Sbjct: 119 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + +L+VE+Y+R Sbjct: 178 LTRYPEREE---LGADINESLIVEYYNR 202 >gi|253575746|ref|ZP_04853081.1| 30S ribosomal protein S4 [Paenibacillus sp. oral taxon 786 str. D14] gi|251844789|gb|EES72802.1| 30S ribosomal protein S4 [Paenibacillus sp. oral taxon 786 str. D14] Length = 199 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR+G +L G K R + PG HG ++ K S +G QL KQK++ Sbjct: 1 MARYTGPKFKLSRRLGISLSGTGKDL--KRPFPPGQHGPNQRRKVSNYGAQLLEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A G + LESRLD +VYR F + ARQ V+H H Sbjct: 59 MYG-LGEKQFRTLFEKAQHMPGIAGETFMILLESRLDNLVYRLGFANSRAGARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SYR GDVI ++++S+ L+SV EA + VP Y+ N + ++ Sbjct: 118 VTVNGKKVDIASYRVNVGDVIGLRERSRGLSSVKEALE-NRTHVPAYLEFNDTTLEGKYI 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFY+R Sbjct: 177 RLPERSE---LSQDIDEKQIVEFYNR 199 >gi|254421878|ref|ZP_05035596.1| ribosomal protein S4 [Synechococcus sp. PCC 7335] gi|196189367|gb|EDX84331.1| ribosomal protein S4 [Synechococcus sp. PCC 7335] Length = 202 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+G+ KS ++Y PG HGQ RK K Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVVRRLGDLPGLTRKSA--RKAYPPGQHGQARKKKSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ K+A R+ G T ++ LE RLD ++R PTI AARQ VNH H Sbjct: 58 NYG-VTERQLLRYVKKARRAGGSTGQVILQQLEMRLDNTIFRLGMGPTIPAARQVVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNGR V+I SY+C+ GDVI V+ K V + ++P ++ + + A Sbjct: 117 ITVNGRVVSIPSYQCRPGDVIGVRGKEASKKLVTANLEFPGLANIPTHLDFDKGKLEAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 TGVIER---EWIALNINELLVVEYYSR 200 >gi|315221587|ref|ZP_07863507.1| ribosomal protein S4 [Streptococcus anginosus F0211] gi|315189421|gb|EFU23116.1| ribosomal protein S4 [Streptococcus anginosus F0211] Length = 227 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 25 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 83 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G N + LE RLD +VYR T ARQFVNH Sbjct: 84 TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 142 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 143 HILVDGKRVDIPSYRVSVGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 201 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVE+Y++ Sbjct: 202 TRLPERDE---INPEINEALVVEYYNK 225 >gi|310765574|gb|ADP10524.1| 30S ribosomal protein S4 [Erwinia sp. Ejp617] Length = 202 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 124/207 (59%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKS 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 ++VNGR V+I SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M F Sbjct: 119 IMVNGRVVSIASYQVTPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKMEGVF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP + +L+VE YS+ Sbjct: 179 KRIPERTD---LSADINEHLIVELYSK 202 >gi|114319643|ref|YP_741326.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1] gi|122312435|sp|Q0ABF1|RS4_ALHEH RecName: Full=30S ribosomal protein S4 gi|114226037|gb|ABI55836.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1] Length = 206 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + P++++ PG Q R+++ S +GLQLR KQ Sbjct: 1 MARYIGPTCKLARREGTDLFLKSGVRPLDSKCKLDQPPGPKLQ-RRTRMSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-ERQFRNYYKEAARQKGATGTVLLQLLESRLDNVVYRMGFATTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175 +HR V VNGR VN+ S + GD++ +K+K+++ V A ++A+++ P ++ V+ Sbjct: 119 SHRGVQVNGRVVNVPSMQVSPGDLVGLKEKAQKQLRVQAALEMAQQNGWPAWVEVDPKKF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+ P + +L+VE YS+ Sbjct: 179 EGTYKARPDRAD---LSAEINESLIVELYSK 206 >gi|308069706|ref|YP_003871311.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681] gi|305858985|gb|ADM70773.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681] Length = 199 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR+G +L G K R + PG HG ++ K S +G+QL+ KQK++ Sbjct: 1 MARYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGANQRRKISNYGMQLQEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F +A G N + LESRLD +V+R F + ARQ V H H Sbjct: 59 MYG-LGEKQFRTLFNKAQHMHGIAGENFMFLLESRLDNLVFRLGFANSRAGARQLVAHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SY+ GDVI ++++S+ L+S+ EA + + Y+ N + F+ Sbjct: 118 VTVNGKKVDIASYQVSPGDVIGLRERSRSLSSIKEALE-NRNHLVAYLEYNDAALEGKFI 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFY+R Sbjct: 177 RLPERGE---LSQDIDEKQIVEFYNR 199 >gi|148381393|ref|YP_001255934.1| ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502] gi|153933367|ref|YP_001385768.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397] gi|153935510|ref|YP_001389175.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall] gi|153940320|ref|YP_001392806.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland] gi|168178860|ref|ZP_02613524.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916] gi|168181892|ref|ZP_02616556.1| 30S ribosomal protein S4 [Clostridium botulinum Bf] gi|170755638|ref|YP_001783093.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra] gi|226950905|ref|YP_002805996.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto] gi|237796914|ref|YP_002864466.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657] gi|171769230|sp|A7FZ45|RS4A_CLOB1 RecName: Full=30S ribosomal protein S4 A gi|171769265|sp|A7GJ46|RS4A_CLOBL RecName: Full=30S ribosomal protein S4 A gi|172047868|sp|A5I7H8|RS4A_CLOBH RecName: Full=30S ribosomal protein S4 A gi|148290877|emb|CAL85013.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502] gi|152929411|gb|ABS34911.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397] gi|152931424|gb|ABS36923.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall] gi|152936216|gb|ABS41714.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland] gi|169120850|gb|ACA44686.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra] gi|182669924|gb|EDT81900.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916] gi|182674921|gb|EDT86882.1| 30S ribosomal protein S4 [Clostridium botulinum Bf] gi|226841883|gb|ACO84549.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto] gi|229261759|gb|ACQ52792.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657] gi|295320786|gb|ADG01164.1| 30S ribosomal protein S4 [Clostridium botulinum F str. 230613] gi|322807778|emb|CBZ05353.1| SSU ribosomal protein S4p (S9e) [Clostridium botulinum H04402 065] Length = 206 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 115/212 (54%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K R Y PG HGQ RK K S +GLQLR Sbjct: 1 MARYTGATCRLCRREGLKLFLKGDRCYTDKCAFARRGYAPGQHGQSRK-KVSNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG I E++FR ++EADR RG T NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKAKRIYG-ILERQFRGYYEEADRRRGITGENLLRLLEMRLDNVVYRLGYGNSRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY+ DVI V KSK ++ + +P ++S N + Sbjct: 119 LVTHGHFLVNGKKVDIPSYQVSANDVITVCDKSKATEKFKTFAENP-KTLPAWLSGNVEG 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ +D+ PV L+VE YS+ Sbjct: 178 FEGKVERQPAR-EDIDVPV--NETLIVELYSK 206 >gi|322412877|gb|EFY03785.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] gi|323128282|gb|ADX25579.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 203 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVEAGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|332185474|ref|ZP_08387222.1| ribosomal protein S4 [Sphingomonas sp. S17] gi|332014452|gb|EGI56509.1| ribosomal protein S4 [Sphingomonas sp. S17] Length = 190 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 121/192 (63%), Positives = 149/192 (77%), Gaps = 2/192 (1%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K YYGD++EK+F++ + Sbjct: 1 MGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDFGLQLRAKQKLKGYYGDVTEKQFKACY 60 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +EA R +GDTS NLI LE RLD IVYRAKF PTIFAARQ V+H H+ VNG N+ S R Sbjct: 61 QEAARMKGDTSQNLIGLLEQRLDMIVYRAKFAPTIFAARQLVSHGHIRVNGVKCNVASRR 120 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 C GD I + K+ ++A VLEA QLAER+VP+Y++ + + VA R+P+ L +VPYPV Sbjct: 121 CFVGDEISLGSKAAEMALVLEAQQLAEREVPDYVTADGNTKVA-LTRVPT-LDEVPYPVK 178 Query: 195 MQPNLVVEFYSR 206 M+PNLVVEFYSR Sbjct: 179 MEPNLVVEFYSR 190 >gi|322391286|ref|ZP_08064757.1| 30S ribosomal protein S4 [Streptococcus peroris ATCC 700780] gi|321145890|gb|EFX41280.1| 30S ribosomal protein S4 [Streptococcus peroris ATCC 700780] Length = 203 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F EA + +G N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVEATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + D + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDADKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFY++ Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201 >gi|325955022|ref|YP_004238682.1| ribosomal protein S4 [Weeksella virosa DSM 16922] gi|323437640|gb|ADX68104.1| ribosomal protein S4 [Weeksella virosa DSM 16922] Length = 200 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 123/207 (59%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ G+ ++G KS + Y PG HG +R+SK S + +QL KQK K Sbjct: 1 MARYTGPKTKIARKFGQTIFGDDKS-FEKKKYPPGQHGPNKRRSKKSEYAIQLAEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++F +++K+A+ S+G T L+ ESRLD +VYR PT AARQ V+H+ Sbjct: 60 YTYG-ILERQFENMYKKANASKGITGEVLLQLCESRLDNVVYRLGIAPTRSAARQLVSHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY+ KEGDV+ V++KSK L ++ ++ R E++ N + TF Sbjct: 119 HITVNGNIVNIPSYQLKEGDVVAVREKSKSLQTIKDSLHA--RREYEWLVWNDEQTSGTF 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P V P ++ L+VE YS+ Sbjct: 177 TKAPER---VQIPEDIKELLIVELYSK 200 >gi|238788888|ref|ZP_04632678.1| 30S ribosomal protein S4 [Yersinia frederiksenii ATCC 33641] gi|238792959|ref|ZP_04636589.1| 30S ribosomal protein S4 [Yersinia intermedia ATCC 29909] gi|238722915|gb|EEQ14565.1| 30S ribosomal protein S4 [Yersinia frederiksenii ATCC 33641] gi|238727813|gb|EEQ19337.1| 30S ribosomal protein S4 [Yersinia intermedia ATCC 29909] Length = 202 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T +RQ V+H+ Sbjct: 60 IYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M F Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKMEGVF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP + +L+VE YS+ Sbjct: 179 KRIPERTD---LSADINEHLIVELYSK 202 >gi|242278683|ref|YP_002990812.1| ribosomal protein S4 [Desulfovibrio salexigens DSM 2638] gi|259495273|sp|C6C1B0|RS4_DESAD RecName: Full=30S ribosomal protein S4 gi|242121577|gb|ACS79273.1| ribosomal protein S4 [Desulfovibrio salexigens DSM 2638] Length = 208 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K ++ RR GE L+ + K R Y PG+ G+ RK K S + +QLR Sbjct: 1 MARYTKAKCRLCRREGEKLFIKGDRCFTDKCSYERRPYAPGIAGRMRK-KMSDYAIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FRS FK AD +G T NL+ LE+RLD VYR F + ARQ Sbjct: 60 KQKVRRMYGVL-EGQFRSYFKRADGMKGVTGANLLMLLETRLDNTVYRLGFANSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H NGR VN+ S K GDVIEV+++S+++ + EA + +A R PE++ + Sbjct: 119 LVKHGIFTKNGRRVNVPSMHVKPGDVIEVREESRKIPVIAEAQEVIARRGCPEWLEADGA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +P+ +D+ +P + L+VE YS+ Sbjct: 179 NFKGEVKAMPTR-EDIQFP--INEQLIVELYSK 208 >gi|288942048|ref|YP_003444288.1| 30S ribosomal protein S4 [Allochromatium vinosum DSM 180] gi|288897420|gb|ADC63256.1| ribosomal protein S4 [Allochromatium vinosum DSM 180] Length = 206 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 121/210 (57%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQK 57 M++ K+ RR G +L + + ++T+ GQ R+ + S +G+QLR KQK Sbjct: 1 MARYIGPTCKLARREGVDLSLKSRARSLDTKCKLEKQPGQTTDRRRRLSDYGVQLREKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +++ YG + E++FR+ +K+A +S+G T NL+ LE RLD +VYR F T ARQ V+ Sbjct: 61 VRRIYGVL-ERQFRNYYKKAAQSKGATGENLLQILERRLDNVVYRMGFGATRAEARQLVS 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176 H+ +LVNGR VNI SY+ D +EV++ +K+ V A LAE+ P+++ V+ + Sbjct: 120 HKGILVNGRIVNIASYQVNADDHVEVREAAKKQVRVQNAMALAEQYGFPDWVEVDSKGLK 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP P + +L+VE YS+ Sbjct: 180 GVFKRIPDRSD---LPADINESLIVELYSK 206 >gi|149195169|ref|ZP_01872260.1| 30S ribosomal protein S4 [Caminibacter mediatlanticus TB-2] gi|149134721|gb|EDM23206.1| 30S ribosomal protein S4 [Caminibacter mediatlanticus TB-2] Length = 208 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +I+RR+G +L + KS ++ R Y PG HGQ R++K S +G QLR Sbjct: 1 MARYTGPVERIERRLGVSLELKGERRLAGKSALDRRPYAPGQHGQ-RRAKISEYGQQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K YYG + EK+FR FKEA+R G+T NLI LE RLD +VYR F T ARQ Sbjct: 60 KQKIKYYYGVL-EKQFRRFFKEANRQEGNTGENLIKLLERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ VNI SY KEGD IE+++KSK + A +L A+ + ++ V+ + Sbjct: 119 LVTHGHILVNGKRVNIPSYIVKEGDRIEIREKSKNNPQIQRALELTAQTGIAPWVDVDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 MV F R+P + + + LVVE YS+ Sbjct: 179 KMVGVFQRVPEREE---VNIPVDERLVVELYSK 208 >gi|237653971|ref|YP_002890285.1| 30S ribosomal protein S4 [Thauera sp. MZ1T] gi|237625218|gb|ACR01908.1| ribosomal protein S4 [Thauera sp. MZ1T] Length = 209 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R+Y PG HGQR + S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCSIERRAYAPGQHGQRSGQRLSGYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++FR ++ EADR RG T NL+ LE RLD + YR F + ARQ Sbjct: 61 KQKIRRIYGVL-ERQFRKVYAEADRRRGQTGENLLQLLEGRLDAVAYRMGFGASRAEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H VLVNG+ VNI SY + GDV+E+ ++++ V A + AE R PE++ V+ Sbjct: 120 VVRHNGVLVNGKRVNIPSYVVRPGDVVELTERARGHLRVKAALEAAESRGFPEWLEVDAK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + P + LVVE YSR Sbjct: 180 AGKGTFKAYPVRSE---LPPTINEGLVVELYSR 209 >gi|150025382|ref|YP_001296208.1| 30S ribosomal protein S4 [Flavobacterium psychrophilum JIP02/86] gi|172048611|sp|A6GZ74|RS4_FLAPJ RecName: Full=30S ribosomal protein S4 gi|149771923|emb|CAL43397.1| 30S ribosomal protein S4 [Flavobacterium psychrophilum JIP02/86] Length = 201 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ +I R+ GE ++G KS R+Y PG HG +++ K S F +QL KQK K Sbjct: 1 MARYTGPSTRIARKFGEAIFGDDKS-FEKRNYPPGQHGMAKKRGKKSEFAIQLMEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I EK+FR +FK+A S+G T L+ E+RLD +VYR PT AARQ V+HR Sbjct: 60 YSYG-ILEKQFRGLFKKAAASKGVTGEILLQLCEARLDNVVYRMGIAPTRRAARQIVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV VNG VN+ SY K GD + V++KSK L ++ + + V E+I+ N M TF Sbjct: 119 HVTVNGELVNVPSYHLKPGDKVAVREKSKSLEAIDRSLSNSSH-VYEWITWNTAQMEGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P+ L+ P ++ L+VE Y++ Sbjct: 178 VSVPARLQ---IPENIKEQLIVELYNK 201 >gi|317050554|ref|YP_004111670.1| 30S ribosomal protein S4 [Desulfurispirillum indicum S5] gi|316945638|gb|ADU65114.1| ribosomal protein S4 [Desulfurispirillum indicum S5] Length = 208 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR + L+ + K R+Y PG HGQ R+ KPS + +QLR Sbjct: 1 MARYTGPVCRMCRRENQKLYLKGLRCETSKCAFERRAYAPGSHGQ-RRGKPSDYAIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR F +A R +G T NL++ LE R D +VYR + +RQ Sbjct: 60 KQKVRRTYG-LLETQFRRTFDKAVRMKGVTGSNLLTLLELRFDNVVYRLGLGVSRSQSRQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 + H H L+NG+ NI S + + GDVI +++KS L V + + R VP+++ + + Sbjct: 119 LITHGHFLLNGKKANIPSIQLRAGDVISLREKSANLDVVRGSVEAGPSRTVPQWLEFDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P +DV PV NL+VE YSR Sbjct: 179 KLTGKVKQLPVR-EDVTEPVT--ENLIVELYSR 208 >gi|218961407|ref|YP_001741182.1| 30S ribosomal subunit protein S4 [Candidatus Cloacamonas acidaminovorans] gi|167730064|emb|CAO80976.1| 30S ribosomal subunit protein S4 [Candidatus Cloacamonas acidaminovorans] Length = 205 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 123/209 (58%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K KI R+ GEN++G K ++ R Y G HG+ + K S +GL L+ KQKM Sbjct: 1 MAKYTGPKAKICRKFGENIYGNAKYDKILSKRKYPAGQHGRNLRRKLSDYGLHLKEKQKM 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y + EK+F + FK+A ++ G T NL+ LE RLD +VYR F T ARQF+NH Sbjct: 61 RHTYC-LMEKQFSNYFKKAAKAPGVTGDNLLQLLERRLDNVVYRMGFAVTRMQARQFINH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNMVA 177 H LVNGR V+I SY K GD+IEV+ KSK + +LEA E P ++SV+ +N Sbjct: 120 GHFLVNGRKVDIPSYLVKAGDIIEVRPKSKGMKPLLEAMDKTEVTSPYSWMSVDKENFRG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F IP+ + PV L+VEFYS+ Sbjct: 180 QFNSIPAVSE---IPVTCDLRLIVEFYSK 205 >gi|149279638|ref|ZP_01885767.1| 30S ribosomal protein S4 [Pedobacter sp. BAL39] gi|149229674|gb|EDM35064.1| 30S ribosomal protein S4 [Pedobacter sp. BAL39] Length = 202 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ E ++G K ++ ++Y PG HG +R+ K S + +QL KQK+K Sbjct: 1 MARYTGPKSKIARKFREPIFGPDK-VLDRKNYPPGQHGASKRRGKQSEYAVQLMEKQKVK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR++F +A +G T NL+ LE+RLD VYR T AARQ V+H+ Sbjct: 60 YTYGVL-ERQFRNLFTKASSRQGITGDNLLQLLEARLDNTVYRLGIATTRSAARQLVSHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV VNG VNI SY+ K GDVI V++KSK L ++ + + ++ N + F Sbjct: 119 HVTVNGEVVNIPSYQLKAGDVIAVREKSKTLEAITNSVAGRVINKFNWLDWNASELTGKF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + P ++ NL+VE YS+ Sbjct: 179 LSYPNRDE---IPENIKENLIVELYSK 202 >gi|119512953|ref|ZP_01632015.1| 30S ribosomal protein S4 [Nodularia spumigena CCY9414] gi|119462406|gb|EAW43381.1| 30S ribosomal protein S4 [Nodularia spumigena CCY9414] Length = 202 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE K+ R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGELPGLSRKTA--RRAYPPGQHGQNRKKRSEY-AVRLEEKQKIRM 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ ++A R G T L+ LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-LTEKQLLRYVRKARRVTGSTGQVLLQMLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ V+I SY+C+ G+V+ ++ + V Q ++P ++ + + Sbjct: 117 VTVNGKRVDIASYQCRPGEVVAIRDREASRKLVEANLQYPGLANLPSHLEFDKAKLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200 >gi|152989997|ref|YP_001355719.1| 30S ribosomal protein S4 [Nitratiruptor sp. SB155-2] gi|172048726|sp|A6Q1K3|RS4_NITSB RecName: Full=30S ribosomal protein S4 gi|151421858|dbj|BAF69362.1| 30S ribosomal protein S4 [Nitratiruptor sp. SB155-2] Length = 208 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 125/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR+G +L + KS + R Y PG HGQRR Y GLQLR Sbjct: 1 MARYRGPVEKIERRLGVSLALKGERRLAGKSALEKRPYPPGQHGQRRSKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ++EK+FR++FKEA+R G+T NLI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VAEKQFRNLFKEANRMEGNTGENLIKLLERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 VNH HVLV+G+ VNI S+R K G IE+++KSK + + +L + + ++ V+ + Sbjct: 119 LVNHGHVLVDGKRVNIPSFRVKPGQKIEIREKSKNNPQIQRSLELTNQTGIVPWVDVDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F RIP + + ++ L+VE YS+ Sbjct: 179 KVFGIFTRIPEREE---IDIPVEERLIVELYSK 208 >gi|218885212|ref|YP_002434533.1| 30S ribosomal protein S4 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226732177|sp|B8DNK8|RS4_DESVM RecName: Full=30S ribosomal protein S4 gi|218756166|gb|ACL07065.1| ribosomal protein S4 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 208 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K +K ++ RR G L+ + K + R Y PG HG+ RK K S + +QLR Sbjct: 1 MAKYNDAKCRMCRREGTKLFLKGDRCYTDKCAYDRRPYAPGQHGRARK-KVSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++FR F +AD ++G T NL++ LE RLD ++YR F + ARQ Sbjct: 60 KQKVRRVYGVL-ERQFRGYFHKADMAKGVTGANLLAILERRLDNVIYRLGFANSRQQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NGR NI S + + GD+IEV + S+++ + EA + +A R P ++ V+ Sbjct: 119 LVRHGIFTLNGRKANIPSMQVRVGDIIEVPEASRKIPVIAEAQEVIARRGCPSWLEVDGP 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T +P +D+ +P + +L+VE YS+ Sbjct: 179 SFKGTVKALPQR-EDIQFP--INEHLIVELYSK 208 >gi|257054497|ref|YP_003132329.1| 30S ribosomal protein S4 [Saccharomonospora viridis DSM 43017] gi|256584369|gb|ACU95502.1| SSU ribosomal protein S4P [Saccharomonospora viridis DSM 43017] Length = 202 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ +I RR+ +L G K R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRISRRLKVDLVGNDK-AFERRPYPPGQHGRGRVKESEYL-LQLQEKQKARH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I E++FR ++EA R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-ILERQFRRYYEEAARRPGKTGDNLLQLLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKS-KQLASVLEASQLAERDVPEYISVNHDNMVATF 179 LVNG VNI SYR + D+I+V+ KS K L V L ER +P ++ V N+ Sbjct: 118 FLVNGEKVNIPSYRVSKFDIIDVRPKSLKTLPFVAAKESLGERPIPAWLQVVPSNLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IEVPVQEQLIVEFYSK 201 >gi|156743922|ref|YP_001434051.1| 30S ribosomal protein S4 [Roseiflexus castenholzii DSM 13941] gi|189045395|sp|A7NR37|RS4_ROSCS RecName: Full=30S ribosomal protein S4 gi|156235250|gb|ABU60033.1| ribosomal protein S4 [Roseiflexus castenholzii DSM 13941] Length = 206 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 M++ KI RR+G + + + + R + PG HG R+ + S +GLQL KQK + Sbjct: 1 MARYIGPVGKISRRLGIGITEKGQRILAKRPFPPGQHGPSARRRQVSDYGLQLLEKQKAR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR IF++A R G+T L+ LE RLD +VYR F T ARQ V H Sbjct: 61 YIYGVL-ERQFRRIFEKAQRFPGETGAYLLILLERRLDNVVYRLGFATTRAQARQLVTHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMV 176 H+ VNGR NI SY + G+ I V+ +S++ E+ LA+ P+++ +N ++ Sbjct: 120 HITVNGRKTNIPSYTVRVGETIAVRPESRRRMYFKNLVESGALAKHKAPDWLRLNPADLS 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P P + L+VEFYSR Sbjct: 180 GEVVAMPRREDAEP---GINEQLIVEFYSR 206 >gi|269792766|ref|YP_003317670.1| 30S ribosomal protein S4 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100401|gb|ACZ19388.1| ribosomal protein S4 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 208 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS+ ++ R G L+ + K + R+ PG HG RK K S +G++LR Sbjct: 1 MSRYTGPVCRLCRAEGTKLFLKGDRCYTEKCAIARRNTRPGQHGA-RKGKTSEYGIRLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++++YG ++E +F +++ A + G T H+ + LE RLD +VYR F + AR+ Sbjct: 60 KQKLRRFYG-LNESQFAKMYEMATKMPGQTGHDFLQLLERRLDNVVYRLGFAVSRRQARE 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H H LVNGR +++ S + GDV+ V++KS+ + + + +++A +R VP ++ VN + Sbjct: 119 LVRHGHFLVNGRKLDVPSALLRAGDVVTVREKSRDVEVLKQNAEVASQRSVPGWLEVNPE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M V +P+ + V + LVVEFY+R Sbjct: 179 TMSGRVVSLPTRDQ---IEVPVNEQLVVEFYAR 208 >gi|326793582|ref|YP_004311402.1| ribosomal protein S4 [Marinomonas mediterranea MMB-1] gi|326544346|gb|ADZ89566.1| ribosomal protein S4 [Marinomonas mediterranea MMB-1] Length = 206 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L + + ++ PG+HG R+ + S +GLQLR KQ Sbjct: 1 MARYLGPTCKLSRREGTDLLLKSGARALESKCKAETVPGVHGA-RRGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K A R +G T NL+ LESRLD +VYRA F T ARQ V Sbjct: 60 KVRRTYGVL-EKQFRNYYKHAARIKGATGENLLQLLESRLDNVVYRAGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 H+ +LVNG +VN+ SY+ K GDV+ +++K+K+ + A +L+ R +I V+ + Sbjct: 119 GHKGILVNGETVNVASYQVKAGDVVSIREKAKKQLRIQNALELSKNRTSIHWIEVDATKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ATF P + NL+VE YS+ Sbjct: 179 EATFKAAPERAD---LSAEINENLIVELYSK 206 >gi|30248442|ref|NP_840512.1| 30S ribosomal protein S4 [Nitrosomonas europaea ATCC 19718] gi|41017978|sp|Q82X70|RS4A_NITEU RecName: Full=30S ribosomal protein S4 A gi|30138328|emb|CAD84336.1| Ribosomal protein S4:S4 domain [Nitrosomonas europaea ATCC 19718] Length = 208 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K + RR GE L+ + K P+ R+Y PG HGQ +K + S + +QLR Sbjct: 1 MARNINPKCRQCRREGEKLFLKGDKCFSDKCPIERRNYPPGQHGQ-KKVRLSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR+++K AD+ +G T NL+ LESRLD + Y F + ARQ Sbjct: 60 KQKIRRIYG-LLENQFRNVYKRADKQKGVTGDNLLQLLESRLDNVAYNMGFGSSRSEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H VL+NG+ NI S+ + GD+IE+ + +K + + + A+ R +P ++ V+ D Sbjct: 119 IVRHNCVLLNGKRANIPSHLVEPGDLIEIAEHAKSYLRIKASIEAAKRRSIPSWLEVDFD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ + P + +LVVE YS+ Sbjct: 179 NLKGLYKSKPERSD---LSSTINESLVVELYSK 208 >gi|77918341|ref|YP_356156.1| 30S ribosomal protein S4 [Pelobacter carbinolicus DSM 2380] gi|90101701|sp|Q3A6M1|RS4_PELCD RecName: Full=30S ribosomal protein S4 gi|77544424|gb|ABA87986.1| SSU ribosomal protein S4P [Pelobacter carbinolicus DSM 2380] Length = 209 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K + R+Y PG HGQ R +K S +G QLR Sbjct: 1 MARYTGPVCRLCRRETMKLFLKGDRCYTDKCALERRNYAPGQHGQGR-TKVSDYGTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ+MK+ YG + EK+FR+ F +AD +G T NL+ LE RLD+ VYR F + R Sbjct: 60 KQRMKRTYG-LLEKQFRAYFDKADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRA 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H LVNGR VNI SY + DVIE+++KS+++ + +A R +P ++ ++ + Sbjct: 119 LVRQGHFLVNGRKVNIPSYVMRPNDVIELREKSRKITRINDALDGVMRRGLPSWVELDRE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + Q L+VE YS+ Sbjct: 179 AFKGTFKTLPVREEMTT--PAFQEQLIVELYSK 209 >gi|26399543|sp|Q9S0Q9|RS4_SHEVI RecName: Full=30S ribosomal protein S4 gi|5913931|dbj|BAA84524.1| ribosomal protein S4 [Shewanella violacea] Length = 206 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK++ S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETPPGRHGA-RKTRLSEYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G+T NL++ LE+RLD +VYR F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARQKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVNG VNI S++ DVI +++KSK+ A + + ++A +R+ P ++ V++ M Sbjct: 119 SHKSILVNGSVVNIPSFKVSASDVISIREKSKKQARISASLEVASQREKPTWVEVDNTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE S+ Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELCSK 206 >gi|227550803|ref|ZP_03980852.1| 30S ribosomal protein S4 [Enterococcus faecium TX1330] gi|257878795|ref|ZP_05658448.1| ribosomal protein S4 [Enterococcus faecium 1,230,933] gi|257881433|ref|ZP_05661086.1| ribosomal protein S4 [Enterococcus faecium 1,231,502] gi|257885703|ref|ZP_05665356.1| ribosomal protein S4 [Enterococcus faecium 1,231,501] gi|257887941|ref|ZP_05667594.1| ribosomal protein S4 [Enterococcus faecium 1,141,733] gi|257890654|ref|ZP_05670307.1| ribosomal protein S4 [Enterococcus faecium 1,231,410] gi|257893257|ref|ZP_05672910.1| ribosomal protein S4 [Enterococcus faecium 1,231,408] gi|257896441|ref|ZP_05676094.1| ribosomal protein S4 [Enterococcus faecium Com12] gi|257899415|ref|ZP_05679068.1| ribosomal protein S4 [Enterococcus faecium Com15] gi|258615136|ref|ZP_05712906.1| 30S ribosomal protein S4 [Enterococcus faecium DO] gi|260558361|ref|ZP_05830557.1| ribosomal protein S4 [Enterococcus faecium C68] gi|261207068|ref|ZP_05921757.1| ribosomal protein S4 [Enterococcus faecium TC 6] gi|289565930|ref|ZP_06446370.1| 30S ribosomal protein S4 [Enterococcus faecium D344SRF] gi|293379587|ref|ZP_06625726.1| ribosomal protein S4 [Enterococcus faecium PC4.1] gi|293556844|ref|ZP_06675405.1| ribosomal protein S4 [Enterococcus faecium E1039] gi|293563783|ref|ZP_06678222.1| ribosomal protein S4 [Enterococcus faecium E1162] gi|293567853|ref|ZP_06679194.1| ribosomal protein S4 [Enterococcus faecium E1071] gi|294614629|ref|ZP_06694533.1| ribosomal protein S4 [Enterococcus faecium E1636] gi|294618566|ref|ZP_06698125.1| ribosomal protein S4 [Enterococcus faecium E1679] gi|294622064|ref|ZP_06701197.1| ribosomal protein S4 [Enterococcus faecium U0317] gi|314938819|ref|ZP_07846090.1| ribosomal protein S4 [Enterococcus faecium TX0133a04] gi|314943624|ref|ZP_07850378.1| ribosomal protein S4 [Enterococcus faecium TX0133C] gi|314948703|ref|ZP_07852076.1| ribosomal protein S4 [Enterococcus faecium TX0082] gi|314952153|ref|ZP_07855171.1| ribosomal protein S4 [Enterococcus faecium TX0133A] gi|314991873|ref|ZP_07857330.1| ribosomal protein S4 [Enterococcus faecium TX0133B] gi|314996586|ref|ZP_07861621.1| ribosomal protein S4 [Enterococcus faecium TX0133a01] gi|227180040|gb|EEI61012.1| 30S ribosomal protein S4 [Enterococcus faecium TX1330] gi|257813023|gb|EEV41781.1| ribosomal protein S4 [Enterococcus faecium 1,230,933] gi|257817091|gb|EEV44419.1| ribosomal protein S4 [Enterococcus faecium 1,231,502] gi|257821559|gb|EEV48689.1| ribosomal protein S4 [Enterococcus faecium 1,231,501] gi|257823995|gb|EEV50927.1| ribosomal protein S4 [Enterococcus faecium 1,141,733] gi|257827014|gb|EEV53640.1| ribosomal protein S4 [Enterococcus faecium 1,231,410] gi|257829636|gb|EEV56243.1| ribosomal protein S4 [Enterococcus faecium 1,231,408] gi|257833006|gb|EEV59427.1| ribosomal protein S4 [Enterococcus faecium Com12] gi|257837327|gb|EEV62401.1| ribosomal protein S4 [Enterococcus faecium Com15] gi|260075535|gb|EEW63841.1| ribosomal protein S4 [Enterococcus faecium C68] gi|260078696|gb|EEW66398.1| ribosomal protein S4 [Enterococcus faecium TC 6] gi|289162303|gb|EFD10163.1| 30S ribosomal protein S4 [Enterococcus faecium D344SRF] gi|291589438|gb|EFF21245.1| ribosomal protein S4 [Enterococcus faecium E1071] gi|291592531|gb|EFF24136.1| ribosomal protein S4 [Enterococcus faecium E1636] gi|291595179|gb|EFF26513.1| ribosomal protein S4 [Enterococcus faecium E1679] gi|291598362|gb|EFF29446.1| ribosomal protein S4 [Enterococcus faecium U0317] gi|291600928|gb|EFF31219.1| ribosomal protein S4 [Enterococcus faecium E1039] gi|291604264|gb|EFF33759.1| ribosomal protein S4 [Enterococcus faecium E1162] gi|292641803|gb|EFF59974.1| ribosomal protein S4 [Enterococcus faecium PC4.1] gi|313589275|gb|EFR68120.1| ribosomal protein S4 [Enterococcus faecium TX0133a01] gi|313593578|gb|EFR72423.1| ribosomal protein S4 [Enterococcus faecium TX0133B] gi|313595685|gb|EFR74530.1| ribosomal protein S4 [Enterococcus faecium TX0133A] gi|313597661|gb|EFR76506.1| ribosomal protein S4 [Enterococcus faecium TX0133C] gi|313641830|gb|EFS06410.1| ribosomal protein S4 [Enterococcus faecium TX0133a04] gi|313644875|gb|EFS09455.1| ribosomal protein S4 [Enterococcus faecium TX0082] Length = 203 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ KI RR+G +L G K + R Y PG HG + K S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKISRRLGISLSGTGKE-LARRPYAPGQHGPNSRGKQSEYGMQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFRNLFVKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY + G VI V++KS+ + +V EA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYHVEVGQVISVREKSQNIVTVKEAVE-ATVGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + P + LVVE+Y Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199 >gi|15837777|ref|NP_298465.1| 30S ribosomal protein S4 [Xylella fastidiosa 9a5c] gi|26399518|sp|Q9PE53|RS4_XYLFA RecName: Full=30S ribosomal protein S4 gi|9106141|gb|AAF83985.1|AE003951_10 30S ribosomal protein S4 [Xylella fastidiosa 9a5c] Length = 208 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 16/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G +L + K + R PG HG RKSK S + QLR Sbjct: 1 MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR+ +K A +G+T NL+ LE+RLD ++YR F T AAR Sbjct: 58 EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171 Q V+HR VLVNG+ VN+ SY K GDV+ + Q++++ V E+ + ++ ++ V+ Sbjct: 117 QLVSHRRVLVNGKLVNLPSYHVKPGDVVALSQRAQKYLCVQESLTIKDQHGSAFSWVEVD 176 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F P P + L+VE YS+ Sbjct: 177 SEKFSGVFKAFPDRAD---LPSDINEALIVELYSK 208 >gi|310642769|ref|YP_003947527.1| 30S ribosomal protein s4 [Paenibacillus polymyxa SC2] gi|309247719|gb|ADO57286.1| 30S ribosomal protein S4 [Paenibacillus polymyxa SC2] Length = 199 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K+ RR+G +L G K R + PG HG ++ K S +G+QL+ KQK++ Sbjct: 1 MARYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGANQRRKISNYGMQLQEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F +A G N + LESRLD +V+R F + ARQ V H H Sbjct: 59 MYG-LGEKQFRTLFNKAQHMHGIAGENFMFLLESRLDNLVFRLGFANSRAGARQLVAHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V+I SY+ GDVI ++++S+ L+S+ EA + + Y+ N + ++ Sbjct: 118 VTVNGKKVDIASYQVSPGDVIGLRERSRSLSSIKEALE-NRNHLVAYLEYNDAALEGKYI 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFY+R Sbjct: 177 RLPERAE---LSQDIDEKQIVEFYNR 199 >gi|116624175|ref|YP_826331.1| 30S ribosomal protein S4P [Candidatus Solibacter usitatus Ellin6076] gi|122253109|sp|Q01WB9|RS4_SOLUE RecName: Full=30S ribosomal protein S4 gi|116227337|gb|ABJ86046.1| SSU ribosomal protein S4P [Candidatus Solibacter usitatus Ellin6076] Length = 210 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 10/213 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + RR G L+ + K + R++ PG HG+ R K +GLQLR Sbjct: 1 MARYIGPVCRQCRREGMKLYLKGERCHSEKCAIEKRNFIPGQHGKDRAKKIVGYGLQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++FR+ F++A +G T NL+ LE RLD+++YR F + ARQ Sbjct: 61 KQKVRRVYGVL-ERQFRNAFEKAALQKGITGENLMQNLERRLDSVIYRMGFGTSRAQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+ VNGR NI S GD I V++ SK A++L A A P +I V+ + Sbjct: 120 VVRHGHINVNGRKCNIPSALINVGDEITVRETSKNNATILSARDATAHAPAPNWIEVDRE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P V + + L+VE YS+ Sbjct: 180 GLKGRVQSLPKREDLVQ--IQLNEQLIVELYSK 210 >gi|257792535|ref|YP_003183141.1| 30S ribosomal protein S4 [Eggerthella lenta DSM 2243] gi|257476432|gb|ACV56752.1| ribosomal protein S4 [Eggerthella lenta DSM 2243] Length = 208 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K + R+Y PG G++R + Y QLR Sbjct: 1 MARYTGADCRLCRREGAKLFLKGDRCYTEKCAIERRNYAPGEAGKKRIKESEYRN-QLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + EK+FR + A+R +G T NL+ LESRLD +VYR F + ARQ Sbjct: 60 KQKTKRIYGVL-EKQFRHYYDMANRQKGVTGENLLRILESRLDNVVYRLGFAKSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V H H+ VNGR V+I S+R K GD++ V K+ L + A ER VP ++ V+ + Sbjct: 119 QVRHGHITVNGRRVDIPSFRVKPGDLVAVAPKAADLLVIKSALISNERVQVPSWLEVDIE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + +P + + ++ L+VE YS+ Sbjct: 179 KLQGSVLALPQRDQ---IDLDIREQLIVELYSK 208 >gi|255530540|ref|YP_003090912.1| 30S ribosomal protein S4 [Pedobacter heparinus DSM 2366] gi|255343524|gb|ACU02850.1| ribosomal protein S4 [Pedobacter heparinus DSM 2366] Length = 202 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R+ E ++G K ++ ++Y PG HG +R+ K S + +QL KQK+K Sbjct: 1 MARYTGPKSKIARKFREPIFGPDK-VLDRKNYPPGQHGASKRRGKQSEYAVQLMEKQKVK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR++F +A G T NL+ LE+RLD VYR T AARQ V+H+ Sbjct: 60 YTYGVL-ERQFRNLFTKASSRGGITGDNLLQLLEARLDNTVYRLGIATTRSAARQLVSHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV VNG VNI SY+ K GDVI V+QKSK L ++ + + ++ N + F Sbjct: 119 HVTVNGEVVNIPSYQLKAGDVIAVRQKSKTLEAITNSVAGRVINKFNWLDWNASELSGKF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + P ++ NL+VE YS+ Sbjct: 179 LAYPNRDE---IPENIKENLIVELYSK 202 >gi|37912969|gb|AAR05301.1| ribosomal protein S4 [uncultured marine gamma proteobacterium EB000-45B06] gi|40063200|gb|AAR38037.1| ribosomal protein S4 [uncultured marine bacterium 562] Length = 207 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ ++ RR G +L+ + + ++ PG+ R+ + S +GLQLR KQ Sbjct: 1 MARYTGPTLRLSRREGTDLYLKSGVRAIESKCNMDSPPGVAAGARRGRLSDYGLQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A ++G+T NL+S LE R+D +VYR F T ARQ V Sbjct: 61 KVRRMYGVL-EKQFRNYYKKAASTKGNTGENLLSLLEKRMDNVVYRMGFGSTRAEARQMV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H+ VNG VNI SY+ K GD ++V+ K + A ++ A R+ +++ V+ N+ Sbjct: 120 SHKAFKVNGEVVNIPSYQMKAGDEVQVRDNKKGHLRIAAALKIAATREDCDWLEVDEANL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P + NL++E YS+ Sbjct: 180 KGVFKSVPDRTD---LSTEINENLIIELYSK 207 >gi|187932119|ref|YP_001892104.1| 30S ribosomal protein S4 [Francisella tularensis subsp. mediasiatica FSC147] gi|226699067|sp|B2SDW1|RS4_FRATM RecName: Full=30S ribosomal protein S4 gi|187713028|gb|ACD31325.1| 30S ribosomal protein S4 [Francisella tularensis subsp. mediasiatica FSC147] Length = 206 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + N + PG HG R+++ S +GLQLR +Q Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLRERQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E +F+ + EA R +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H+ ++VNG + N+ S + K GDV+ V++K+K+ + A +LA+ R +I VN D++ Sbjct: 119 VHKGIMVNGHTCNVPSAQVKAGDVVAVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P + + L++E YS+ Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206 >gi|55821964|ref|YP_140406.1| 30S ribosomal protein S4 [Streptococcus thermophilus LMG 18311] gi|55823881|ref|YP_142322.1| 30S ribosomal protein S4 [Streptococcus thermophilus CNRZ1066] gi|55737949|gb|AAV61591.1| 30S ribosomal protein S4 [Streptococcus thermophilus LMG 18311] gi|55739866|gb|AAV63507.1| 30S ribosomal protein S4 [Streptococcus thermophilus CNRZ1066] Length = 217 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 15 MSRYTGPSWKQSRRLGFSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 73 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SEK+FR++F +A + +G T N + LE RLD +VYR T ARQFVNH Sbjct: 74 SYG-LSEKQFRNLFVQATKVKGGTLGFNFMILLERRLDNVVYRLGLATTRRQARQFVNHG 132 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 133 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVE-ATIGRPAFVSFDAEKLEGSL 191 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 192 TRLPERDE---INPEINEALVVEFYNK 215 >gi|37523141|ref|NP_926518.1| 30S ribosomal protein S4 [Gloeobacter violaceus PCC 7421] gi|41017822|sp|Q7NFF4|RS4_GLOVI RecName: Full=30S ribosomal protein S4 gi|35214144|dbj|BAC91513.1| 30S ribosomal protein S4 [Gloeobacter violaceus PCC 7421] Length = 206 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ R +G L+ + PK + R++ PG+HGQ R+ Y ++L+ Sbjct: 1 MARYTGPVCKLCRAVGMKLYLKGIRCSSPKCAIERRNFRPGVHGQARQKLSEY-AIRLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR F +A R+ G+T + LE RLD +VYR F + ARQ Sbjct: 60 KQKARWSYGVL-EKQFRRTFSDASRATGNTGAKFLELLERRLDNVVYRLGFATSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173 +VNH H VNGR V+I SYR + GD I V A V EA + A P+++ N + Sbjct: 119 WVNHGHFAVNGRRVSIPSYRVRPGDAITVMP--NSAAFVKEALEAASLPQAPKWLEANRE 176 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + AT +P +D+ PV Q L+VEFYSR Sbjct: 177 TLAATVKALPER-EDIDTPV--QELLIVEFYSR 206 >gi|317490401|ref|ZP_07948885.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA] gi|325833388|ref|ZP_08165837.1| ribosomal protein S4 [Eggerthella sp. HGA1] gi|316910536|gb|EFV32161.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA] gi|325485312|gb|EGC87781.1| ribosomal protein S4 [Eggerthella sp. HGA1] Length = 208 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K + R+Y PG G++R + Y QLR Sbjct: 1 MARYTGADCRLCRREGAKLFLKGDRCYTEKCAIERRNYAPGEAGKKRIKESEYRN-QLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + EK+FR + A+R +G T NL+ LESRLD +VYR F + ARQ Sbjct: 60 KQKTKRIYGVL-EKQFRHYYDMANRQKGVTGENLLRILESRLDNVVYRLGFAKSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V H H+ VNGR V+I S+R K GD++ V K+ L + A ER VP ++ V+ + Sbjct: 119 QVRHGHITVNGRRVDIPSFRVKPGDLVAVAPKAADLLVIKSALISNERVQVPAWLEVDIE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + +P + + ++ L+VE YS+ Sbjct: 179 KLQGSVLALPQRDQ---IDLDIREQLIVELYSK 208 >gi|161616441|ref|YP_001590406.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224585211|ref|YP_002639010.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|161365805|gb|ABX69573.1| hypothetical protein SPAB_04256 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224469739|gb|ACN47569.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|321226467|gb|EFX51517.1| SSU ribosomal protein S4p (S9e) [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 202 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 124/207 (59%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M T+ Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTY 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + +L+VE YS+ Sbjct: 179 KRKPERSD---LSADINEHLIVELYSK 202 >gi|193211877|ref|YP_001997830.1| 30S ribosomal protein S4 [Chlorobaculum parvum NCIB 8327] gi|226697821|sp|B3QR97|RS4_CHLP8 RecName: Full=30S ribosomal protein S4 gi|193085354|gb|ACF10630.1| ribosomal protein S4 [Chlorobaculum parvum NCIB 8327] Length = 203 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 117/207 (56%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R Y PG HGQ R+ K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGIALSPKAEKYLERRPYAPGEHGQSRRGKVSEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +K+A RG T NL+ LE R D +VYR F P+ ARQ V H H Sbjct: 61 LYGVL-EKQFRIYYKKAVAQRGVTGDNLVKMLERRFDNVVYRCGFSPSRAGARQLVTHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI S+ GD IE +QKS+ L +V ++ AE +PE+I V+ N A F Sbjct: 120 MLVNGKKVNIPSFLVSPGDQIEFRQKSRNLDAVADSLNKAAESRIPEWIQVDKANRKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + IP LVVE YS+ Sbjct: 180 LAIPER---EAVQEPFNEQLVVELYSK 203 >gi|187776603|ref|ZP_02993076.1| hypothetical protein CLOSPO_00117 [Clostridium sporogenes ATCC 15579] gi|187775262|gb|EDU39064.1| hypothetical protein CLOSPO_00117 [Clostridium sporogenes ATCC 15579] Length = 206 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K R Y PG HGQ RK K S +GLQLR Sbjct: 1 MARYTGATCRLCRREGLKLFLKGDRCYTDKCAFARRGYAPGQHGQSRK-KVSNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG I E++FR ++EADR RG T NL+ LE RLD +V+R + + ARQ Sbjct: 60 KQKAKRIYG-ILERQFRGYYEEADRRRGITGENLLRLLEMRLDNVVFRLGYGNSRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H L+NG+ V+I SY+ DVI V KSK ++ + +P ++S N + Sbjct: 119 LVTHGHFLINGKKVDIPSYQVSANDVITVCDKSKATEKFKTFAENP-KTLPAWLSGNVEG 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ +D+ PV L+VE YS+ Sbjct: 178 FEGKVERQPAR-EDIDVPV--NETLIVELYSK 206 >gi|212704608|ref|ZP_03312736.1| hypothetical protein DESPIG_02670 [Desulfovibrio piger ATCC 29098] gi|212672007|gb|EEB32490.1| hypothetical protein DESPIG_02670 [Desulfovibrio piger ATCC 29098] Length = 208 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K +K +I RR G L+ + K + R Y PG HG+ RK Y +QLR Sbjct: 1 MAKYTEAKCRICRREGCKLFLKGDRCFTDKCAYDRRPYAPGQHGRARKKVSEY-AVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I EK+FR F++A+ +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKTRRSYG-ILEKQFRGYFEKAEMQKGVTGTNLLVILERRLDNVVYRLGFANSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NG V I S + + GD IEV +K++++ + EA + +A R P ++ + Sbjct: 119 LVRHGIFTLNGHKVTIPSLQVRVGDTIEVPEKNRKIPVLAEAQEVIARRGCPAWLEADGA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P D+ +PV L+VE YS+ Sbjct: 179 AFKGTVKALPQR-DDIQFPV--NEQLIVELYSK 208 >gi|298492220|ref|YP_003722397.1| 30S ribosomal protein S4 ['Nostoc azollae' 0708] gi|298234138|gb|ADI65274.1| ribosomal protein S4 ['Nostoc azollae' 0708] Length = 202 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE KS R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGELPGLTRKSA--RRAYAPGQHGQNRKKRSEY-AIRLEEKQKLRL 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ ++A R G T L+ LE RLD V+R PTI ARQ VNH H Sbjct: 58 NYG-LTEKQMLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRMGMAPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR VNI SY+C+ G+ I V+ V Q ++P ++ + + + Sbjct: 117 VTVNGRVVNIASYQCRPGEEIAVRDNEASKKLVESNLQYPGLANLPNHLEFDKNKLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200 >gi|153871948|ref|ZP_02000981.1| 30S ribosomal protein S4 [Beggiatoa sp. PS] gi|152071584|gb|EDN69017.1| 30S ribosomal protein S4 [Beggiatoa sp. PS] Length = 206 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS----PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++ PG HG +R + S + LQLR KQ Sbjct: 1 MARYLGPKCKLSRREGVDLFLKSRARGLESKCKLEKLPGQHGDKRP-RLSDYALQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F + + +A R +G T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KLRRLYGVL-ERQFHNYYLKASRKKGSTGENLLMLLEGRLDNVVYRMGFAVTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVN +SVNI SY+ K GDVI ++ KS+ + A A E ++PE++ V+ + M Sbjct: 119 SHKAILVNEKSVNIPSYQVKAGDVIAIRGKSRTQLRIKAALSQAVEFELPEWVEVDVEKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F P+ + P M LVVE YS+ Sbjct: 179 SGVFKAQPTIGE---LPGDMNVQLVVELYSK 206 >gi|114330597|ref|YP_746819.1| 30S ribosomal protein S4 [Nitrosomonas eutropha C91] gi|122314409|sp|Q0AIH2|RS4_NITEC RecName: Full=30S ribosomal protein S4 gi|114307611|gb|ABI58854.1| SSU ribosomal protein S4P [Nitrosomonas eutropha C91] Length = 208 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K + RR GE L+ + K P+ R+Y PG HGQ RK++ S + +QLR Sbjct: 1 MARNINPKCRQCRREGEKLFLKGDKCFSDKCPIERRNYPPGQHGQ-RKTRLSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR+++K ADR +G T NL+ LESRLD + Y F + ARQ Sbjct: 60 KQKIRRIYG-LLENQFRNVYKRADRQKGITGENLLKLLESRLDNVAYNMGFGASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 + H +L+NG+ NI S GD IEV + +K + + +LA+ R +P ++ V+ D Sbjct: 119 IIRHDCILLNGKKANIPSQLIGPGDQIEVAEHAKSYLRIKSSIELAKRRSIPSWLEVDFD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ + P + +LVVE YS+ Sbjct: 179 NLKGLYKNKPDRSD---LSSTINESLVVELYSK 208 >gi|116618921|ref|YP_819292.1| SSU ribosomal protein S4P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122270879|sp|Q03V53|RS4_LEUMM RecName: Full=30S ribosomal protein S4 gi|116097768|gb|ABJ62919.1| SSU ribosomal protein S4P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 203 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 123/205 (60%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K +I RR+G +L G K ++ R+Y PG HG R++K S +G+QLR KQK++ Sbjct: 1 MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGMQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F +A + R T N + LE RLD++VYR T ARQ VNH Sbjct: 60 TYG-LTERQFKALFNKAGKIRKGTHGTNFMISLEQRLDSVVYRLGLATTRQQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY + G V+ V++KSK + + A + P+++S++ + + + Sbjct: 119 HILVDGKRVDIPSYSVQPGQVVSVREKSKNILPIQAAIESVVAR-PQFVSLDTEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + + L+VE+Y Sbjct: 178 VRLPEREE---LDADINEALIVEYY 199 >gi|158337110|ref|YP_001518285.1| 30S ribosomal protein S4 [Acaryochloris marina MBIC11017] gi|189045361|sp|B0C9F5|RS4_ACAM1 RecName: Full=30S ribosomal protein S4 gi|158307351|gb|ABW28968.1| 30S ribosomal protein S4 [Acaryochloris marina MBIC11017] Length = 202 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+P R+Y PG HGQ RK + Y QL KQK++ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQARKKRSEYAA-QLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ ++A R+ G T L+ LE RLD ++R PTI AARQ VNH H Sbjct: 58 NYG-LSERQLLRYVRKARRAGGSTGQTLLQLLEMRLDNTIFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNGR V+I SY+C+ GDVI+ + + + Q ++P ++ + + + Sbjct: 117 VLVNGRVVSIASYQCRPGDVIQSRDRDASRKLIETHMQFPGLANIPTHLDFDKNTLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIER---EWIALEINELLVVEYYSR 200 >gi|227513091|ref|ZP_03943140.1| 30S ribosomal protein S4 [Lactobacillus buchneri ATCC 11577] gi|227083666|gb|EEI18978.1| 30S ribosomal protein S4 [Lactobacillus buchneri ATCC 11577] Length = 231 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G +L G K ++ R Y PG HGQ R+ K S +GLQL+ KQK++ Sbjct: 29 MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRQKLSEYGLQLKEKQKLRY 87 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + R N + LE RLD IVYR T ARQ VNH Sbjct: 88 MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLERRLDNIVYRLGLATTRRQARQLVNHG 146 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G V+ V++KSK L V A + A P+Y+S + D + + Sbjct: 147 HITVDGKRVDIPSYEVKTGQVVSVREKSKDLQVVKNAVE-AVVGRPQYVSFDADKLEGSL 205 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + +L+VE+Y++ Sbjct: 206 VRLPQREE---LDADIDESLIVEYYNK 229 >gi|28378911|ref|NP_785803.1| 30S ribosomal protein S4 [Lactobacillus plantarum WCFS1] gi|254557116|ref|YP_003063533.1| 30S ribosomal protein S4 [Lactobacillus plantarum JDM1] gi|300769694|ref|ZP_07079577.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181113|ref|YP_003925241.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258326|sp|Q88UX0|RS4_LACPL RecName: Full=30S ribosomal protein S4 gi|28271748|emb|CAD64654.1| ribosomal protein S4 [Lactobacillus plantarum WCFS1] gi|254046043|gb|ACT62836.1| 30S ribosomal protein S4 [Lactobacillus plantarum JDM1] gi|300492737|gb|EFK27922.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046604|gb|ADN99147.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 202 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ KI RR+G +L G K + R Y PG HGQ R+ K S +G QLR KQK++ Sbjct: 1 MSRYTGPSWKISRRLGMSLSGTGKE-LARRPYAPGDHGQGRRGKLSEYGTQLREKQKLRM 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F +A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-LTERQFANLFIKAGKIREGKHGVNFMILLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G V+ V++KSK+LA + A + A P ++ + D + + Sbjct: 119 HITVDGKRVDIPSYEVSVGQVVSVREKSKKLAVITGAVE-AVVARPNFVQFDADKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +L+VE+Y++ Sbjct: 178 TRLPEREE---LEADIDESLIVEYYNK 201 >gi|283853178|ref|ZP_06370431.1| ribosomal protein S4 [Desulfovibrio sp. FW1012B] gi|283571436|gb|EFC19443.1| ribosomal protein S4 [Desulfovibrio sp. FW1012B] Length = 208 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K +I RR G L+ + K R Y PG HG+ RK K S + + LR Sbjct: 1 MARYTEAKCRICRREGGKLFLKGDRCYTDKCAYERRPYAPGQHGRIRK-KMSDYAVMLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR+ F+ AD +G T NL+SFLE R+D +VYR F + ARQ Sbjct: 60 KQKTRRMYG-ILEGQFRAYFQRADMKKGVTGENLLSFLERRMDNVVYRLGFANSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H ++NG V I S + K GDVIEV++K++Q +LEA Q +A R P ++ V+ + Sbjct: 119 LVRHGLFVLNGHRVTIPSLQVKVGDVIEVREKNRQSPIILEAQQVIARRGCPAWLEVDGE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ +DV +P + L+VE YS+ Sbjct: 179 KLKGKVNALPTR-EDVQFP--INEQLIVELYSK 208 >gi|325288604|ref|YP_004264785.1| SSU ribosomal protein S4P [Syntrophobotulus glycolicus DSM 8271] gi|324964005|gb|ADY54784.1| SSU ribosomal protein S4P [Syntrophobotulus glycolicus DSM 8271] Length = 209 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K S ++ RR G L+ + K ++ R Y PG+HGQ R KPS FG+QLR Sbjct: 1 MAKYTDSVCRLCRREGIKLFLKGDRCYTNKCSIDRRPYAPGVHGQSRGRKPSDFGIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I EK+FR F+ A R +G T NL+ LE RLD +VYR F + ARQ Sbjct: 61 KQKARRIYG-IMEKQFRRYFEMASRQKGMTGENLLRLLERRLDNVVYRIGFASSRAEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 FV H H+ VNG+ V+I SY K G+VI V +KS+ + + E +A+R VP ++S + + Sbjct: 120 FVTHGHITVNGKRVDIASYLIKVGEVIAVNEKSRSSSRIKELIDTMADRSVPGWLSADSN 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T + +PS +D+ P ++ + +VE YSR Sbjct: 180 SASGTVLALPSR-EDIQIP--IEEHFIVEKYSR 209 >gi|119899681|ref|YP_934894.1| 30S ribosomal protein S4 [Azoarcus sp. BH72] gi|152060933|sp|A1KB02|RS4_AZOSB RecName: Full=30S ribosomal protein S4 gi|119672094|emb|CAL96008.1| 30S ribosomal protein S4 [Azoarcus sp. BH72] Length = 209 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R+Y PG HGQR + S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQRSGQRLSGYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++FR ++ EADR RG T NL+ LE RLD++ YR F + ARQ Sbjct: 61 KQKIRRLYGVL-ERQFRKVYAEADRRRGQTGENLLQLLEGRLDSVAYRMGFGASRAEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H VLVNG+ VNI SY + GDVIE+ + +K V A + AE R PE+I V+ Sbjct: 120 VVRHNGVLVNGKRVNIPSYTVRPGDVIELAEGTKGHLRVKAALEAAESRGFPEWIEVDAK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F P + + LVVE YSR Sbjct: 180 AGKGVFKAYPQRSE---LSATINEGLVVELYSR 209 >gi|255526606|ref|ZP_05393513.1| ribosomal protein S4 [Clostridium carboxidivorans P7] gi|296187295|ref|ZP_06855691.1| ribosomal protein S4 [Clostridium carboxidivorans P7] gi|255509714|gb|EET86047.1| ribosomal protein S4 [Clostridium carboxidivorans P7] gi|296048166|gb|EFG87604.1| ribosomal protein S4 [Clostridium carboxidivorans P7] Length = 206 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K V+ R Y PG HGQ RK K S +GLQLR Sbjct: 1 MARYTGAVCRLCRREGLKLFLKGDRCFTDKCAVSRRGYAPGQHGQSRK-KVSNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + E +FR+ +++A+R RG + NL+ LE RLD + Y+ + + ARQ Sbjct: 60 KQKARRIYGVL-EGQFRTYYEKAERKRGISGENLLKLLEMRLDNVAYKFGYGNSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H L+NG+ V+I SY+ GDVI V +KS+ ++ + +P ++ N +N Sbjct: 119 LVTHGHFLINGKKVDIASYQVSAGDVITVSEKSRSTERFKTFAENP-KALPAWLEGNPEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR PS +D+ PV L+VE YS+ Sbjct: 178 FEGKIVREPSR-EDIDVPV--NETLIVELYSK 206 >gi|227529662|ref|ZP_03959711.1| 30S ribosomal protein S4 [Lactobacillus vaginalis ATCC 49540] gi|227350452|gb|EEJ40743.1| 30S ribosomal protein S4 [Lactobacillus vaginalis ATCC 49540] Length = 220 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ RR+G +L G K + R+Y PG HG+ R K S +G QLR KQK++ Sbjct: 20 MSRYTGPSWRLSRRLGVSLSGTGKE-LARRAYAPGDHGRDRHGKLSEYGTQLREKQKLRF 78 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + + T N ++ LE RLD +VYR T ARQ VNH Sbjct: 79 MYG-MTERQFSNLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 137 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G VI V+ KSK L + A A P Y+ + D + Sbjct: 138 HITVDGKRVDIPSYEVSVGQVIAVRDKSKNLDVIKNAVD-AVVSRPSYVDFDADKLEGKL 196 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ + +L+VEFY++ Sbjct: 197 NRIPAR---EDMDADIDESLIVEFYNK 220 >gi|56752482|ref|YP_173183.1| 30S ribosomal protein S4 [Synechococcus elongatus PCC 6301] gi|81300296|ref|YP_400504.1| 30S ribosomal protein S4 [Synechococcus elongatus PCC 7942] gi|61215367|sp|Q5MZ57|RS4_SYNP6 RecName: Full=30S ribosomal protein S4 gi|123556802|sp|Q31N52|RS4_SYNE7 RecName: Full=30S ribosomal protein S4 gi|56687441|dbj|BAD80663.1| 30S ribosomal protein S4 [Synechococcus elongatus PCC 6301] gi|81169177|gb|ABB57517.1| SSU ribosomal protein S4P [Synechococcus elongatus PCC 7942] Length = 202 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGDLPGLTRKAA--RRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A R +G T NL+ LE RLD +V+R F PTI ARQ VNH H Sbjct: 58 NYG-LSERQLVRYVKKARRMQGSTGTNLLQLLEMRLDNLVFRLGFAPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR V+I SY C+ G+VI V+Q+ V + +VP ++ + + + A Sbjct: 117 VTVNGRVVDIASYNCRPGEVIGVRQREASRKLVTANLEYPGLANVPVHLDFDKNKLEAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 TGACER---EWVALQINELLVVEYYSR 200 >gi|312868744|ref|ZP_07728936.1| ribosomal protein S4 [Lactobacillus oris PB013-T2-3] gi|311095730|gb|EFQ53982.1| ribosomal protein S4 [Lactobacillus oris PB013-T2-3] Length = 201 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ RR+G +L G K + R Y PG HG+ R K S +G QLR KQK++ Sbjct: 1 MSRYTGPSWRVSRRLGVSLSGTGKE-LARRPYAPGDHGRDRHGKLSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + + T N ++ LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MTERQFANLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY VI V++KSK L + A A P Y+ + D + Sbjct: 119 HITVDGKRVDIPSYEVDVNQVIGVREKSKNLDIIKNAVD-AVVSRPSYVDFDADKLEGKL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ + L+VEFY++ Sbjct: 178 NRIPAR---EDMDADIDEALIVEFYNK 201 >gi|317485797|ref|ZP_07944661.1| ribosomal protein S4 [Bilophila wadsworthia 3_1_6] gi|316922903|gb|EFV44125.1| ribosomal protein S4 [Bilophila wadsworthia 3_1_6] Length = 208 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K +K ++ RR G L + K + R Y PG HG+ RK K S + +QLR Sbjct: 1 MAKYNDAKCRLCRREGTKLLLKGDRCFTDKCAFDRRPYAPGQHGRARK-KLSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+F F AD ++G T NL++FLE RLD +VYR F + ARQ Sbjct: 60 KQKVRRVYGVL-EKQFHGYFVHADMAKGVTGANLLAFLERRLDNVVYRLGFANSRTQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H +NG V I S + K GD +EV +KS+ + + EA + A R P ++ V+ Sbjct: 119 LVRHGVFTLNGHKVTIPSLQVKVGDSVEVPEKSRTIPVLAEAQEAVARRGCPSWLEVDAP 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +P D+ +P + +L+VE YS+ Sbjct: 179 NFKGIVKALPQR-DDIQFP--INEHLIVELYSK 208 >gi|157964424|ref|YP_001499248.1| 30S ribosomal protein S4 [Rickettsia massiliae MTU5] gi|157844200|gb|ABV84701.1| 30S ribosomal protein S4 [Rickettsia massiliae MTU5] Length = 227 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 1/200 (0%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K +YG ++ Sbjct: 29 SKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 88 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+FR+IF A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H+ +NG+ Sbjct: 89 EKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 148 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 +I S R K GDVIEVK+ KQ+ + E+ + P Y+S + ++ ++R+P+ L Sbjct: 149 KADIASIRLKAGDVIEVKESVKQIPLIQESVSKQGQTTPGYLSFDVPSLTGKYLRVPA-L 207 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 DVPYP + +LV+E YSR Sbjct: 208 SDVPYPFEAEVHLVIELYSR 227 >gi|293570759|ref|ZP_06681809.1| ribosomal protein S4 [Enterococcus faecium E980] gi|291609231|gb|EFF38503.1| ribosomal protein S4 [Enterococcus faecium E980] Length = 203 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ KI RR+G +L G K + R Y PG HG + K S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKISRRLGISLSGTGKE-LARRPYAPGQHGPNSRGKQSEYGMQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFRNLFVKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY + G VI V++KS+ +V EA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYHVEVGQVISVREKSQNNVTVKEAVE-ATVGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + P + LVVE+Y Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199 >gi|223984454|ref|ZP_03634588.1| hypothetical protein HOLDEFILI_01882 [Holdemania filiformis DSM 12042] gi|223963578|gb|EEF67956.1| hypothetical protein HOLDEFILI_01882 [Holdemania filiformis DSM 12042] Length = 211 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G ++ + R+Y PG HG ++ K S +G QLR KQ+++ Sbjct: 12 MARNTGPVWKISRRLGFSI-LETGEELQRRTYAPGQHGPTKRIKLSNYGTQLREKQRIRN 70 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F + + +A++ G HN + LESRLD IVYR F T AARQ VNH H Sbjct: 71 MYG-VNERQFANTYIKAEKMAGVKGHNFLCLLESRLDNIVYRMGFARTRRAARQLVNHGH 129 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I S+ K G +EVK+KSK +A + +A + V +++V+ +N T+V Sbjct: 130 ILVNGKKVDIPSFTVKPGSTVEVKEKSKSMACIADALEATLNTV-AFVTVDKENKKGTYV 188 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVE+Y+R Sbjct: 189 RMPERNE---LNQEINELLVVEYYNR 211 >gi|167626783|ref|YP_001677283.1| 30S ribosomal protein S4 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667363|ref|ZP_04754941.1| 30S ribosomal protein S4 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875913|ref|ZP_05248623.1| 30S ribosomal protein S4 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|189045381|sp|B0U0W6|RS4_FRAP2 RecName: Full=30S ribosomal protein S4 gi|158523431|gb|ABW70829.1| 30s ribosomal protein S4 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596784|gb|ABZ86782.1| 30S ribosomal protein S4 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841934|gb|EET20348.1| 30S ribosomal protein S4 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 206 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + N + PG HG R+++ S +GLQLR KQ Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E +F+ + EA+R +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 60 KVRRMYGVL-EGQFKKYYVEANRRKGNTGATLLEILESRLDNVVYRMGFAATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H+ +++NG + N+ S + K GDV+ V++KSK+ + A +LA+ R +I VN D++ Sbjct: 119 VHKGIMLNGHTCNVPSAQVKAGDVVAVREKSKKQLRIQNAIELAKHRKELSWIDVNTDSL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P + + L++E YS+ Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206 >gi|45644720|gb|AAS73108.1| predicted ribosomal protein S4 [uncultured marine gamma proteobacterium EBAC20E09] Length = 211 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 15/216 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS--------YGPGLHGQRRKSKPSYFGLQ 51 M++ ++ RR G +L + + T+ PG+HG R + S +GLQ Sbjct: 1 MARYRGPSLRLSRREGTDLLLKSGVRAIETKCRTDGNGGLKSPGVHGAMR-GRLSDYGLQ 59 Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 LR KQK+++ YG + EK+FR+ +K+A S+G+T NL+S LE RLD +VYR F T Sbjct: 60 LREKQKVRRMYGVL-EKQFRNYYKKAASSKGNTGENLLSLLEKRLDNVVYRMGFGCTRAE 118 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISV 170 ARQ V+H+ +VNG +VNI SY+ + GD IEV++ K + A ++ A R+ +++ V Sbjct: 119 ARQMVSHKAFMVNGSTVNIPSYQVQPGDEIEVRESKKGHLRIAAALKIAATREECDWLEV 178 Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + N+ F +P + NL+VE YS+ Sbjct: 179 DDKNLKGVFKSVPDRTD---LSAEINENLIVELYSK 211 >gi|323700831|ref|ZP_08112743.1| ribosomal protein S4 [Desulfovibrio sp. ND132] gi|323460763|gb|EGB16628.1| ribosomal protein S4 [Desulfovibrio desulfuricans ND132] Length = 208 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K K+ RR GE L+ + K R Y PG G+ R K S + +QLR Sbjct: 1 MARYTEAKCKLCRREGEKLFLKGDRCYTDKCAYEKRPYPPGQAGRLR-HKMSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR+ +K A+ +G HNL+ LE RLD ++YR F + ARQ Sbjct: 60 KQKVRRMYG-ILEGQFRTYYKRAEGMKGVAGHNLLFLLERRLDNVIYRLGFANSRDQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NGR V+I S + K DVIEV+++++++ + EA + +A R PE++ + Sbjct: 119 LVLHGIFKLNGRRVSIPSMQVKAEDVIEVREEARKIPVINEAQEVIARRGCPEWLESDGA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N T +PS +D+ +P + L+VE YS+ Sbjct: 179 NFKGTVKAMPSR-EDIQFP--INEQLIVELYSK 208 >gi|291296964|ref|YP_003508362.1| 30S ribosomal protein S4 [Meiothermus ruber DSM 1279] gi|290471923|gb|ADD29342.1| ribosomal protein S4 [Meiothermus ruber DSM 1279] Length = 205 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + K+ R +G N+ K ++ R Y PG HGQ+RK +PS F ++LR KQK+ Sbjct: 1 MGRYRGPIVKVARHLGVNIAETEKVQKYLDRRPYAPGQHGQKRKGRPSDFAVRLREKQKL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y +SE +FR++F+EA R +G T + LESRLD +V+R T ARQFV H Sbjct: 61 RFIYD-VSETQFRNLFEEASRKKGVTGTVFLQLLESRLDNVVFRMGIASTRRQARQFVRH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVA 177 H+LVNG+ VNI YR + GD I+V +K+K++ +++ + R ++ N D M Sbjct: 120 GHILVNGKRVNIPGYRVRPGDEIKVSEKAKKIDFIVQNVERFKNRKSFPWLEFNADTMTG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F+R+P + + LV+EFYSR Sbjct: 180 RFLRLPER---EMLSLPVNEQLVIEFYSR 205 >gi|169350323|ref|ZP_02867261.1| hypothetical protein CLOSPI_01084 [Clostridium spiroforme DSM 1552] gi|169293106|gb|EDS75239.1| hypothetical protein CLOSPI_01084 [Clostridium spiroforme DSM 1552] Length = 201 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 119/206 (57%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G + K +N R Y PG HGQ+RK KP+ +GLQL KQK++ Sbjct: 1 MSRYTGPQWKISRRLGFSTLENGKE-LNRRPYAPGQHGQKRK-KPTEYGLQLAEKQKVRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+F + FK A + G +N LE RLD +VYR F PT AARQ VNH H Sbjct: 59 MYG-VNEKQFHNTFKRAGKMSGIHGYNFFCLLEQRLDNVVYRLGFAPTRRAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 LVNG +I SY K GDV+EVK+KSK LA + + + P ++ V+ M F Sbjct: 118 FLVNGVKTDIPSYTVKVGDVVEVKEKSKNLAIIKASLE-NRVHTPAFVEVDETKMSGKFT 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +L+VE+Y+R Sbjct: 177 RLPERSE---LNQEINESLIVEYYNR 199 >gi|307248854|ref|ZP_07530867.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307262278|ref|ZP_07543927.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306854781|gb|EFM86971.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306868041|gb|EFM99868.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 204 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 12/209 (5%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRAKQKM 58 K K+ RR G +L+ + + ++ PG HG RK + S +G QLR KQK+ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLREKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 ++ YG I E++FR+ + EA+R +G+T NL+ LE RLD +VYR F T ARQ V+H Sbjct: 60 RRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLVSH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVA 177 + ++VNGR VNI SY+ DV+ V++KSK+ A + + +LA +R+ P ++ V+ M Sbjct: 119 KSIVVNGRVVNIPSYQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDATKMEG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + +L+VE YS+ Sbjct: 179 VFKRTPERSD---LSADINEHLIVELYSK 204 >gi|146319810|ref|YP_001199522.1| 30S ribosomal protein S4 [Streptococcus suis 05ZYH33] gi|146322003|ref|YP_001201714.1| 30S ribosomal protein S4 [Streptococcus suis 98HAH33] gi|223933695|ref|ZP_03625671.1| ribosomal protein S4 [Streptococcus suis 89/1591] gi|253752788|ref|YP_003025929.1| 30S ribosomal protein S4 [Streptococcus suis SC84] gi|253754613|ref|YP_003027754.1| 30S ribosomal protein S4 [Streptococcus suis P1/7] gi|253756546|ref|YP_003029686.1| 30S ribosomal protein S4 [Streptococcus suis BM407] gi|172045576|sp|A4W4M5|RS4_STRS2 RecName: Full=30S ribosomal protein S4 gi|172045584|sp|A4VYD3|RS4_STRSY RecName: Full=30S ribosomal protein S4 gi|145690616|gb|ABP91122.1| 30S ribosomal protein S4 [Streptococcus suis 05ZYH33] gi|145692809|gb|ABP93314.1| 30S ribosomal protein S4 [Streptococcus suis 98HAH33] gi|223897648|gb|EEF64033.1| ribosomal protein S4 [Streptococcus suis 89/1591] gi|251817077|emb|CAZ52729.1| 30S ribosomal protein S4 [Streptococcus suis SC84] gi|251819010|emb|CAZ56857.1| 30S ribosomal protein S4 [Streptococcus suis BM407] gi|251820859|emb|CAR47625.1| 30S ribosomal protein S4 [Streptococcus suis P1/7] gi|319759206|gb|ADV71148.1| 30S ribosomal protein S4 [Streptococcus suis JS14] Length = 203 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSIKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|325843404|ref|ZP_08167962.1| ribosomal protein S4 [Turicibacter sp. HGF1] gi|325489326|gb|EGC91700.1| ribosomal protein S4 [Turicibacter sp. HGF1] Length = 199 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KI RR+G ++ K + R Y PG HGQ RK Y GLQL+ KQK++ Sbjct: 1 MARYTGPSWKISRRLGYSILENGKE-LQKRPYAPGQHGQSRKKISEY-GLQLQEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR + +A + G N + LESRLD +VYR T ARQ VNH H Sbjct: 59 AYG-MTERQFRRTYDKAGKLAGKHGENFLYMLESRLDNLVYRLGLAATRRQARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY K G I +++KS LA V + + A P++++ + M T+V Sbjct: 118 ITVDGKRVDIPSYSVKPGQTISLREKSANLAVVKASLE-ATIHRPDFVTFDEATMTGTYV 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + NL+VEFYSR Sbjct: 177 RLPERSE---VFADIHENLIVEFYSR 199 >gi|91205656|ref|YP_538011.1| 30S ribosomal protein S4 [Rickettsia bellii RML369-C] gi|157826887|ref|YP_001495951.1| 30S ribosomal protein S4 [Rickettsia bellii OSU 85-389] gi|122425523|sp|Q1RI92|RS4_RICBR RecName: Full=30S ribosomal protein S4 gi|172047819|sp|A8GVN7|RS4_RICB8 RecName: Full=30S ribosomal protein S4 gi|91069200|gb|ABE04922.1| 30S ribosomal protein S4 [Rickettsia bellii RML369-C] gi|157802191|gb|ABV78914.1| 30S ribosomal protein S4 [Rickettsia bellii OSU 85-389] Length = 205 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 95/206 (46%), Positives = 139/206 (67%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K SK+K RR+G +LWG K NTR+Y PG HG+ K S +GL L+AKQ++K Sbjct: 1 MTKIVRSKYKASRRLGVSLWGDGKDAFNTRNYRPGQHGRNTMVKTSDYGLHLKAKQRIKC 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+EK+FR+IF A + +G+T N I LESRLD+IVYR PTIF++RQ ++H H Sbjct: 61 HYGRITEKQFRNIFGFAQKMKGNTGENFIGLLESRLDSIVYRMNIAPTIFSSRQLISHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ +I S R KEGDVIE+K+ S+Q+ + E+ + P+Y+S + D++ ++ Sbjct: 121 IKVNGKKADIASMRLKEGDVIEIKEASRQMGIIQESVSKQGQTTPDYVSFDVDSLSGKYL 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ + DV YP + +LVVE YSR Sbjct: 181 RVPT-ISDVRYPFTPEVHLVVELYSR 205 >gi|184154963|ref|YP_001843303.1| 30S ribosomal protein S4 [Lactobacillus fermentum IFO 3956] gi|227514502|ref|ZP_03944551.1| ribosomal protein S4 [Lactobacillus fermentum ATCC 14931] gi|226699079|sp|B2GAZ1|RS4_LACF3 RecName: Full=30S ribosomal protein S4 gi|183226307|dbj|BAG26823.1| 30S ribosomal protein S4 [Lactobacillus fermentum IFO 3956] gi|227087129|gb|EEI22441.1| ribosomal protein S4 [Lactobacillus fermentum ATCC 14931] Length = 201 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ RR+G +L G K + R Y PG HG R+ K S +G QLR KQK++ Sbjct: 1 MSRYTGPSWRLSRRLGVSLSGTGKE-LARRPYAPGDHGNDRRGKLSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + + T N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MTERQFSNLFVRAGKIKEGTHGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G VI V++KSK L + A + A P Y+ + D + Sbjct: 119 HITVDGKRVDIPSYEVKVGQVIAVREKSKNLDVIKGAVE-AVVARPAYVEFDADKLEGKL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + L+VEFY++ Sbjct: 178 TRLPQR---EDMNADIDEALIVEFYNK 201 >gi|241068491|ref|XP_002408449.1| 30S ribosomal protein S4, putative [Ixodes scapularis] gi|215492437|gb|EEC02078.1| 30S ribosomal protein S4, putative [Ixodes scapularis] Length = 205 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 96/200 (48%), Positives = 135/200 (67%), Gaps = 1/200 (0%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K +YG ++ Sbjct: 7 SKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 66 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+FR+IF A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H+ +NG+ Sbjct: 67 EKQFRNIFVLAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 126 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 +I S R KEGDVIEVK+ KQ++ + E+ + P Y+S + ++ ++R+P+ L Sbjct: 127 KADIASIRLKEGDVIEVKESVKQISLIQESVSKQGQTTPGYLSFDVPSLTGKYLRVPA-L 185 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 DVPYP + +LV+E YSR Sbjct: 186 SDVPYPFEAEVHLVIELYSR 205 >gi|195979012|ref|YP_002124256.1| 30S ribosomal protein S4 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225869452|ref|YP_002745400.1| 30S ribosomal protein S4 [Streptococcus equi subsp. zooepidemicus] gi|225871455|ref|YP_002747402.1| 30S ribosomal protein S4 [Streptococcus equi subsp. equi 4047] gi|226695078|sp|B4U0N4|RS4_STREM RecName: Full=30S ribosomal protein S4 gi|254764611|sp|C0MB46|RS4_STRE4 RecName: Full=30S ribosomal protein S4 gi|259495292|sp|C0MGP5|RS4_STRS7 RecName: Full=30S ribosomal protein S4 gi|195975717|gb|ACG63243.1| 30S ribosomal protein S4 RpsD [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225700859|emb|CAW95600.1| 30S ribosomal protein S4 [Streptococcus equi subsp. equi 4047] gi|225702728|emb|CAX00869.1| 30S ribosomal protein S4 [Streptococcus equi subsp. zooepidemicus] Length = 203 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-MGEKQFRNLFVQATKIKEGTLGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I S+R + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSFRVEIGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|289548515|ref|YP_003473503.1| ribosomal protein S4 [Thermocrinis albus DSM 14484] gi|289182132|gb|ADC89376.1| ribosomal protein S4 [Thermocrinis albus DSM 14484] Length = 209 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 8/211 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQ 56 M + +IDRR G + GR + + R++ PG HG+ R+ K + +G++L KQ Sbjct: 1 MGRYIGPWSRIDRRFGVVVSGRKSAARILAKRNFPPGQHGRVKGRRRKLTEYGIRLMEKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K YG I EK+F+ F A +S+G+T L+ LE RLD +VYR T ARQFV Sbjct: 61 KLKFLYGGIREKQFKKYFDMASKSKGNTGQVLLQLLERRLDNVVYRLGIACTRRQARQFV 120 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H H+LVNG+ VNI SY + GDVIEVK S+ + ++E + + R VP ++ ++ +N Sbjct: 121 AHGHILVNGKKVNIPSYLVEPGDVIEVKPSSRDIPQIIENLENMDPRSVPPWLELDKENF 180 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P KD+ + + V+EFYSR Sbjct: 181 RGKVLDYP---KDIQLEIPINLQYVIEFYSR 208 >gi|227892659|ref|ZP_04010464.1| ribosomal protein S4 [Lactobacillus ultunensis DSM 16047] gi|227865530|gb|EEJ72951.1| ribosomal protein S4 [Lactobacillus ultunensis DSM 16047] Length = 203 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD IVYR T ARQ VNH Sbjct: 60 MYG-LNERQFRTLFARAGKIREGQHGVNFMILLERRLDNIVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G V+ +K+ SK L V +A A P ++S + + M T Sbjct: 119 HITVDGKRVDIPSYEVSVGQVVGLKENSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDESLVVEYYNK 201 >gi|17230229|ref|NP_486777.1| 30S ribosomal protein S4 [Nostoc sp. PCC 7120] gi|26399434|sp|Q8YTI0|RS4_ANASP RecName: Full=30S ribosomal protein S4 gi|17131830|dbj|BAB74436.1| 30S ribosomal protein S4 [Nostoc sp. PCC 7120] Length = 202 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KS R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRKKRSEY-AIRLEEKQKLRL 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ + A R G T L+ LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-LTEKQLLRYVRRARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR VNI SY+C+ G+ I V+ K+ V Q ++P ++ + + +V Sbjct: 117 VTVNGRVVNIASYQCRPGEEIAVRDKAPSRKLVENNLQYPGLANLPSHLEFDKNKLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200 >gi|322387048|ref|ZP_08060660.1| 30S ribosomal protein S4 [Streptococcus infantis ATCC 700779] gi|321142132|gb|EFX37625.1| 30S ribosomal protein S4 [Streptococcus infantis ATCC 700779] Length = 203 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFY++ Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201 >gi|15900029|ref|NP_344633.1| 30S ribosomal protein S4 [Streptococcus pneumoniae TIGR4] gi|15902122|ref|NP_357672.1| 30S ribosomal protein S4 [Streptococcus pneumoniae R6] gi|111656925|ref|ZP_01407747.1| hypothetical protein SpneT_02001834 [Streptococcus pneumoniae TIGR4] gi|116516581|ref|YP_815552.1| 30S ribosomal protein S4 [Streptococcus pneumoniae D39] gi|148985431|ref|ZP_01818636.1| ribosomal protein S4 [Streptococcus pneumoniae SP3-BS71] gi|148987815|ref|ZP_01819278.1| ribosomal protein S4 [Streptococcus pneumoniae SP6-BS73] gi|148993925|ref|ZP_01823308.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP9-BS68] gi|148996492|ref|ZP_01824210.1| ribosomal protein S4 [Streptococcus pneumoniae SP11-BS70] gi|149001831|ref|ZP_01826804.1| ribosomal protein S4 [Streptococcus pneumoniae SP14-BS69] gi|149007938|ref|ZP_01831516.1| ribosomal protein S4 [Streptococcus pneumoniae SP18-BS74] gi|149010947|ref|ZP_01832252.1| ribosomal protein S4 [Streptococcus pneumoniae SP19-BS75] gi|149017758|ref|ZP_01834217.1| ribosomal protein S4 [Streptococcus pneumoniae SP23-BS72] gi|168483611|ref|ZP_02708563.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1873-00] gi|168486664|ref|ZP_02711172.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1087-00] gi|168489443|ref|ZP_02713642.1| ribosomal protein S4 [Streptococcus pneumoniae SP195] gi|168492605|ref|ZP_02716748.1| ribosomal protein S4 [Streptococcus pneumoniae CDC0288-04] gi|168493783|ref|ZP_02717926.1| ribosomal protein S4 [Streptococcus pneumoniae CDC3059-06] gi|168577080|ref|ZP_02722909.1| ribosomal protein S4 [Streptococcus pneumoniae MLV-016] gi|169832653|ref|YP_001693607.1| 30S ribosomal protein S4 [Streptococcus pneumoniae Hungary19A-6] gi|182683053|ref|YP_001834800.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CGSP14] gi|194398306|ref|YP_002036801.1| 30S ribosomal protein S4 [Streptococcus pneumoniae G54] gi|221231025|ref|YP_002510177.1| 30S ribosomal protein S4 [Streptococcus pneumoniae ATCC 700669] gi|225853713|ref|YP_002735225.1| 30S ribosomal protein S4 [Streptococcus pneumoniae JJA] gi|225855868|ref|YP_002737379.1| 30S ribosomal protein S4 [Streptococcus pneumoniae P1031] gi|225857950|ref|YP_002739460.1| 30S ribosomal protein S4 [Streptococcus pneumoniae 70585] gi|225860120|ref|YP_002741629.1| 30S ribosomal protein S4 [Streptococcus pneumoniae Taiwan19F-14] gi|237649598|ref|ZP_04523850.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CCRI 1974] gi|237821538|ref|ZP_04597383.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CCRI 1974M2] gi|270291733|ref|ZP_06197949.1| ribosomal protein S4 [Streptococcus sp. M143] gi|289166998|ref|YP_003445265.1| 30S ribosomal protein S4 [Streptococcus mitis B6] gi|293364636|ref|ZP_06611357.1| 30S ribosomal protein S4 [Streptococcus oralis ATCC 35037] gi|298230010|ref|ZP_06963691.1| 30S ribosomal protein S4 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254521|ref|ZP_06978107.1| 30S ribosomal protein S4 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501873|ref|YP_003723813.1| 30S ribosomal protein S4 [Streptococcus pneumoniae TCH8431/19A] gi|303254819|ref|ZP_07340919.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS455] gi|303259128|ref|ZP_07345106.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP-BS293] gi|303260885|ref|ZP_07346834.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP14-BS292] gi|303263212|ref|ZP_07349135.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS397] gi|303267315|ref|ZP_07353176.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS457] gi|303269590|ref|ZP_07355351.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS458] gi|306826273|ref|ZP_07459607.1| 30S ribosomal protein S4 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306828536|ref|ZP_07461731.1| 30S ribosomal protein S4 [Streptococcus mitis ATCC 6249] gi|307066759|ref|YP_003875725.1| hypothetical protein SPAP_0129 [Streptococcus pneumoniae AP200] gi|307126310|ref|YP_003878341.1| 30S ribosomal protein S4 [Streptococcus pneumoniae 670-6B] gi|307702893|ref|ZP_07639841.1| ribosomal protein S4 [Streptococcus oralis ATCC 35037] gi|307705409|ref|ZP_07642267.1| ribosomal protein S4 [Streptococcus mitis SK597] gi|307707985|ref|ZP_07644460.1| ribosomal protein S4 [Streptococcus mitis NCTC 12261] gi|307710135|ref|ZP_07646579.1| ribosomal protein S4 [Streptococcus mitis SK564] gi|307711286|ref|ZP_07647707.1| ribosomal protein S4 [Streptococcus mitis SK321] gi|315612070|ref|ZP_07886987.1| 30S ribosomal protein S4 [Streptococcus sanguinis ATCC 49296] gi|322376030|ref|ZP_08050540.1| ribosomal protein S4 [Streptococcus sp. C300] gi|322378050|ref|ZP_08052537.1| ribosomal protein S4 [Streptococcus sp. M334] gi|322386473|ref|ZP_08060100.1| 30S ribosomal protein S4 [Streptococcus cristatus ATCC 51100] gi|331265518|ref|YP_004325148.1| 30S ribosomal protein S4 [Streptococcus oralis Uo5] gi|54039512|sp|P66566|RS4_STRR6 RecName: Full=30S ribosomal protein S4 gi|54041964|sp|P66565|RS4_STRPN RecName: Full=30S ribosomal protein S4 gi|122279509|sp|Q04MZ3|RS4_STRP2 RecName: Full=30S ribosomal protein S4 gi|226695082|sp|B5E5W8|RS4_STRP4 RecName: Full=30S ribosomal protein S4 gi|226695083|sp|B1I7Y6|RS4_STRPI RecName: Full=30S ribosomal protein S4 gi|226695084|sp|B2IRG4|RS4_STRPS RecName: Full=30S ribosomal protein S4 gi|254764612|sp|C1C9Y5|RS4_STRP7 RecName: Full=30S ribosomal protein S4 gi|254764613|sp|B8ZJX3|RS4_STRPJ RecName: Full=30S ribosomal protein S4 gi|254764615|sp|C1CBQ4|RS4_STRZJ RecName: Full=30S ribosomal protein S4 gi|254764616|sp|C1CHZ1|RS4_STRZP RecName: Full=30S ribosomal protein S4 gi|254764617|sp|C1CNV7|RS4_STRZT RecName: Full=30S ribosomal protein S4 gi|14971552|gb|AAK74273.1| ribosomal protein S4 [Streptococcus pneumoniae TIGR4] gi|15457613|gb|AAK98882.1| 30S Ribosomal protein S4 [Streptococcus pneumoniae R6] gi|116077157|gb|ABJ54877.1| ribosomal protein S4 [Streptococcus pneumoniae D39] gi|147757067|gb|EDK64106.1| ribosomal protein S4 [Streptococcus pneumoniae SP11-BS70] gi|147760289|gb|EDK67278.1| ribosomal protein S4 [Streptococcus pneumoniae SP14-BS69] gi|147760561|gb|EDK67536.1| ribosomal protein S4 [Streptococcus pneumoniae SP18-BS74] gi|147764583|gb|EDK71513.1| ribosomal protein S4 [Streptococcus pneumoniae SP19-BS75] gi|147922389|gb|EDK73509.1| ribosomal protein S4 [Streptococcus pneumoniae SP3-BS71] gi|147926279|gb|EDK77352.1| ribosomal protein S4 [Streptococcus pneumoniae SP6-BS73] gi|147927632|gb|EDK78658.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP9-BS68] gi|147931322|gb|EDK82300.1| ribosomal protein S4 [Streptococcus pneumoniae SP23-BS72] gi|168995155|gb|ACA35767.1| ribosomal protein S4 [Streptococcus pneumoniae Hungary19A-6] gi|172043018|gb|EDT51064.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1873-00] gi|182628387|gb|ACB89335.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CGSP14] gi|183570308|gb|EDT90836.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1087-00] gi|183572140|gb|EDT92668.1| ribosomal protein S4 [Streptococcus pneumoniae SP195] gi|183573248|gb|EDT93776.1| ribosomal protein S4 [Streptococcus pneumoniae CDC0288-04] gi|183576019|gb|EDT96547.1| ribosomal protein S4 [Streptococcus pneumoniae CDC3059-06] gi|183577316|gb|EDT97844.1| ribosomal protein S4 [Streptococcus pneumoniae MLV-016] gi|194357973|gb|ACF56421.1| 30S ribosomal protein S4 [Streptococcus pneumoniae G54] gi|220673485|emb|CAR67956.1| 30S ribosomal protein S4 [Streptococcus pneumoniae ATCC 700669] gi|225720035|gb|ACO15889.1| ribosomal protein S4 [Streptococcus pneumoniae 70585] gi|225723223|gb|ACO19076.1| ribosomal protein S4 [Streptococcus pneumoniae JJA] gi|225724355|gb|ACO20207.1| ribosomal protein S4 [Streptococcus pneumoniae P1031] gi|225727282|gb|ACO23133.1| ribosomal protein S4 [Streptococcus pneumoniae Taiwan19F-14] gi|270279818|gb|EFA25659.1| ribosomal protein S4 [Streptococcus sp. M143] gi|288906563|emb|CBJ21396.1| 30S ribosomal protein S4 [Streptococcus mitis B6] gi|291316894|gb|EFE57326.1| 30S ribosomal protein S4 [Streptococcus oralis ATCC 35037] gi|298237468|gb|ADI68599.1| 30S ribosomal protein S4 [Streptococcus pneumoniae TCH8431/19A] gi|301793388|emb|CBW35753.1| 30S ribosomal protein S4 [Streptococcus pneumoniae INV104] gi|301799257|emb|CBW31777.1| 30S ribosomal protein S4 [Streptococcus pneumoniae OXC141] gi|301801046|emb|CBW33713.1| 30S ribosomal protein S4 [Streptococcus pneumoniae INV200] gi|302598256|gb|EFL65302.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS455] gi|302637722|gb|EFL68208.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP14-BS292] gi|302639546|gb|EFL70003.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP-BS293] gi|302640864|gb|EFL71250.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS458] gi|302643166|gb|EFL73452.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS457] gi|302646985|gb|EFL77209.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS397] gi|304429335|gb|EFM32420.1| 30S ribosomal protein S4 [Streptococcus mitis ATCC 6249] gi|304431549|gb|EFM34531.1| 30S ribosomal protein S4 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306408296|gb|ADM83723.1| hypothetical protein SPAP_0129 [Streptococcus pneumoniae AP200] gi|306483372|gb|ADM90241.1| ribosomal protein S4 [Streptococcus pneumoniae 670-6B] gi|307616050|gb|EFN95248.1| ribosomal protein S4 [Streptococcus mitis NCTC 12261] gi|307616937|gb|EFN96116.1| ribosomal protein S4 [Streptococcus mitis SK321] gi|307619115|gb|EFN98247.1| ribosomal protein S4 [Streptococcus mitis SK564] gi|307621040|gb|EFO00119.1| ribosomal protein S4 [Streptococcus mitis SK597] gi|307623573|gb|EFO02562.1| ribosomal protein S4 [Streptococcus oralis ATCC 35037] gi|315315872|gb|EFU63907.1| 30S ribosomal protein S4 [Streptococcus sanguinis ATCC 49296] gi|321269392|gb|EFX52325.1| 30S ribosomal protein S4 [Streptococcus cristatus ATCC 51100] gi|321278980|gb|EFX56023.1| ribosomal protein S4 [Streptococcus sp. C300] gi|321281032|gb|EFX58045.1| ribosomal protein S4 [Streptococcus sp. M334] gi|326682190|emb|CBY99806.1| 30S ribosomal protein S4 [Streptococcus oralis Uo5] gi|327390493|gb|EGE88833.1| ribosomal protein S4 [Streptococcus pneumoniae GA04375] gi|332075747|gb|EGI86214.1| ribosomal protein S4 [Streptococcus pneumoniae GA17570] gi|332076539|gb|EGI87001.1| ribosomal protein S4 [Streptococcus pneumoniae GA17545] gi|332077392|gb|EGI87853.1| ribosomal protein S4 [Streptococcus pneumoniae GA41301] Length = 203 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|170758349|ref|YP_001788793.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree] gi|169405338|gb|ACA53749.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree] Length = 206 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 112/212 (52%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K R Y PG HGQ RK K S +GLQLR Sbjct: 1 MARYTGATCRLCRREGLKLFLKGDRCYTDKCAFARRGYAPGQHGQSRK-KVSNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG I E++FR ++EADR RG T NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKAKRIYG-ILERQFRGYYEEADRRRGITGENLLRLLEMRLDNVVYRLGYGNSRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY+ DVI V KSK ++ + +P ++S N + Sbjct: 119 LVTHGHFLVNGKKVDIPSYQVSANDVITVCDKSKATEKFKTFAENP-KTLPAWLSGNVEG 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ V + L+VE YS+ Sbjct: 178 FEGKVERQPAR---EDMDVPVNETLIVELYSK 206 >gi|171462904|ref|YP_001797017.1| ribosomal protein S4 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226699102|sp|B1XSS6|RS4_POLNS RecName: Full=30S ribosomal protein S4 gi|171192442|gb|ACB43403.1| ribosomal protein S4 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 207 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + + ++ + PG G+ S+ S +G QLR KQ Sbjct: 1 MARYLGPKAKLARREGTDLFLKSARRALSDKCRLDNKPGQDGRTSGSRTSDYGNQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + E++FR F EA+R +G+T L+ LESRLD +VYR F T ARQ V Sbjct: 61 KVKRIYGVL-ERQFRRYFAEAERRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +H +L+NG VNI S + K GDV+ +++K+K+ A + E+ L + ++SV+ + Sbjct: 120 SHCAILLNGNPVNIPSIQVKPGDVVAIREKAKKQARITESLNLVGQMAAVTWVSVDVAKL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF ++P + +L+VE YSR Sbjct: 180 EGTFKQVPDR---EDISGEINESLIVELYSR 207 >gi|67004474|gb|AAY61400.1| 30S ribosomal protein S4 [Rickettsia felis URRWXCal2] Length = 221 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 96/200 (48%), Positives = 134/200 (67%), Gaps = 1/200 (0%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K +YG ++ Sbjct: 23 SKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 82 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+FR+IF A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H+ +NG+ Sbjct: 83 EKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 142 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 +I S R KEGDVIEVK+ KQ+ + E+ + P Y+S + ++ ++R+P+ L Sbjct: 143 KADIASIRLKEGDVIEVKESVKQIPLIQESVSKQAQTTPGYLSFDVPSLTGKYLRVPA-L 201 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 DVPYP + +LV+E YSR Sbjct: 202 SDVPYPFEAEVHLVIELYSR 221 >gi|157150371|ref|YP_001451346.1| 30S ribosomal protein S4 [Streptococcus gordonii str. Challis substr. CH1] gi|262283690|ref|ZP_06061455.1| ribosomal protein S4 [Streptococcus sp. 2_1_36FAA] gi|172045598|sp|A8AZY6|RS4_STRGC RecName: Full=30S ribosomal protein S4 gi|157075165|gb|ABV09848.1| ribosomal protein S4 [Streptococcus gordonii str. Challis substr. CH1] gi|262260747|gb|EEY79448.1| ribosomal protein S4 [Streptococcus sp. 2_1_36FAA] Length = 203 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|312865798|ref|ZP_07726020.1| ribosomal protein S4 [Streptococcus downei F0415] gi|311098673|gb|EFQ56895.1| ribosomal protein S4 [Streptococcus downei F0415] Length = 203 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + K S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNHRGKLSEYGMQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T +N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-LGEKQFRNLFVQATKIKEGTLGYNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATVGRSAFVSFDEEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFY++ Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201 >gi|193214825|ref|YP_001996024.1| 30S ribosomal protein S4 [Chloroherpeton thalassium ATCC 35110] gi|226697824|sp|B3QYE9|RS4_CHLT3 RecName: Full=30S ribosomal protein S4 gi|193088302|gb|ACF13577.1| ribosomal protein S4 [Chloroherpeton thalassium ATCC 35110] Length = 203 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R+Y PG HGQ RK K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGVALAPKAEKYLGRRAYAPGQHGQSRKGKISEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +K+A RG T NL+ LE R D +V+RA F P+ ARQ V+H H Sbjct: 61 IYGVL-ERQFRNYYKKAVSQRGVTGENLVKLLECRFDNVVFRAGFSPSRAGARQLVSHCH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 + +NG VNI SY+ K GDVI+ ++KS+ + +V + + +P++I V+ NM A F Sbjct: 120 LRINGNKVNIPSYQVKPGDVIDFREKSRNMDAVRNSLNKTPDSRIPQWIQVDKANMKAVF 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P LVVE YS+ Sbjct: 180 LNVPERAD---IQEPYNEQLVVELYSK 203 >gi|85858172|ref|YP_460374.1| 30S ribosomal protein S4P [Syntrophus aciditrophicus SB] gi|123515693|sp|Q2LQD0|RS4_SYNAS RecName: Full=30S ribosomal protein S4 gi|85721263|gb|ABC76206.1| SSU ribosomal protein S4P [Syntrophus aciditrophicus SB] Length = 209 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + S ++ RR G L+ + K R Y PG HGQ R+ +PS +G+QLR Sbjct: 1 MARYKESACRLCRREGLKLFLKGDRCYGEKCAFERRGYAPGEHGQLRRKQPSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR F++AD+ +G T NL+ +LE RLD +VYR F + ARQ Sbjct: 61 KQKLKRMYG-LLEKQFRGYFEKADKKKGITGTNLLLYLERRLDNMVYRLGFANSRNEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H LVNGR VNI S+ GD IEV ++ ++ ++EA + + R +P+++ + + Sbjct: 120 LVRHNHFLVNGRKVNIPSFLVNIGDFIEVTEEGRKNNKIIEAMETIVRRGIPQWLELEQE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +P+ + + +Q LVVE YS+ Sbjct: 180 NFKGKVKMLPTREE---LTMPIQEQLVVELYSK 209 >gi|269469225|gb|EEZ80756.1| ribosomal protein S4 [uncultured SUP05 cluster bacterium] Length = 208 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 124/212 (58%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQR-RKSKPSYFGLQLRAK 55 M++ K+ RR G +L+ + ++++ PG+HG R+ K + +GLQLR K Sbjct: 1 MARYTGPTCKLARREGTDLFLKSGIRSLDSKCKITQLPGMHGANARRQKGTEYGLQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG I EK+FR +K+A + +G T NL+S LE RLD +VYR F T ARQ Sbjct: 61 QKVRRIYG-ILEKQFRLYYKKASQKKGSTGDNLLSLLECRLDNVVYRMGFGATRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN 174 V+H+ +LVNG VNI SY+ D I V++KSK+ + + A +LAE+ E++ V++ Sbjct: 120 VSHKSILVNGSIVNIPSYQVSANDEISVREKSKKQSRIQLAVELAEQSGQVEWVDVDNKA 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F +P+ ++ +L+VE YS+ Sbjct: 180 LKGVFKNVPARDD---LSSDIEEHLIVELYSK 208 >gi|227535269|ref|ZP_03965318.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187153|gb|EEI67220.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 239 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G +L G K + R Y PG HG + K S +G QLR KQK++ Sbjct: 37 MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 95 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F A + + T N + LE+RLD +V+R + ARQ VNH Sbjct: 96 MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 154 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI ++++S+ LA V EA + P Y++ + + Sbjct: 155 HITVDGKRVDIPSYEVEPGQVIALRERSQNLAIVNEAIE-NTVSRPAYVTFDDTKKTGSL 213 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + P + +LVVE+Y Sbjct: 214 VRLPERGELEP---EVDESLVVEYY 235 >gi|229916421|ref|YP_002885067.1| ribosomal protein S4 [Exiguobacterium sp. AT1b] gi|259495280|sp|C4L4A0|RS4_EXISA RecName: Full=30S ribosomal protein S4 gi|229467850|gb|ACQ69622.1| ribosomal protein S4 [Exiguobacterium sp. AT1b] Length = 199 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L K + R Y PG HG RK Y LQL+AKQ ++ Sbjct: 1 MARYTGPAWKLSRRLGISLSETGKE-LAKRPYAPGQHGNGRKKISEYD-LQLQAKQALRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+FR IF +A + G N + LESRLD +VYR T ARQ VNH H Sbjct: 59 MYG-VNEKQFRRIFNDAGKMPGIHGENFMFLLESRLDNLVYRFGLARTRRGARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V+I SYR K G VI V++KSK + ++ EA ++A +++S + + + TFV Sbjct: 118 ITVDGSRVDIASYRVKPGQVIAVREKSKNVKAIAEALEVAPATK-DFVSFDAEKLEGTFV 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + ++ L+VE+YSR Sbjct: 177 RLPERAE---LNDQIKEQLIVEYYSR 199 >gi|327325138|gb|EGE66944.1| ribosomal protein S4 [Propionibacterium acnes HL096PA3] Length = 201 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G KS R Y PG+HG+ R Y LQLR KQK + Sbjct: 1 MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRSRTKDSEY-SLQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EADR++G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR D+I+V++KSK L ++ A + E RDVP ++ V + Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + V + + +VE YS+ Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201 >gi|227431364|ref|ZP_03913416.1| ribosomal protein S4 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352874|gb|EEJ43048.1| ribosomal protein S4 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 203 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 123/205 (60%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K +I RR+G +L G K ++ R+Y PG HG R++K S +G+QLR KQK++ Sbjct: 1 MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGMQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F +A + R T N + LE RLD++VYR T ARQ VNH Sbjct: 60 TYG-LTERQFKALFNKAGKIRKGTHGTNFMISLEQRLDSVVYRLGLATTRQQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY + G V+ V++KSK + + A + P+++S++ + + + Sbjct: 119 HILVDGKRVDIPSYSVQPGQVVSVREKSKNILPIQTAIESVVAR-PQFVSLDTEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + + L+VE+Y Sbjct: 178 VRLPEREE---LDADINEALIVEYY 199 >gi|152112269|sp|A3CRA2|RS4_STRSV RecName: Full=30S ribosomal protein S4 gi|324991900|gb|EGC23823.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK405] gi|324996210|gb|EGC28120.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK678] gi|327458525|gb|EGF04875.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1] gi|327490386|gb|EGF22172.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1058] Length = 203 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + L+VEFY++ Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201 >gi|126697668|ref|YP_001086565.1| 30S ribosomal protein S4 [Clostridium difficile 630] gi|254973759|ref|ZP_05270231.1| 30S ribosomal protein S4 [Clostridium difficile QCD-66c26] gi|255091149|ref|ZP_05320627.1| 30S ribosomal protein S4 [Clostridium difficile CIP 107932] gi|255099260|ref|ZP_05328237.1| 30S ribosomal protein S4 [Clostridium difficile QCD-63q42] gi|255305043|ref|ZP_05349215.1| 30S ribosomal protein S4 [Clostridium difficile ATCC 43255] gi|255312803|ref|ZP_05354386.1| 30S ribosomal protein S4 [Clostridium difficile QCD-76w55] gi|255515562|ref|ZP_05383238.1| 30S ribosomal protein S4 [Clostridium difficile QCD-97b34] gi|255648657|ref|ZP_05395559.1| 30S ribosomal protein S4 [Clostridium difficile QCD-37x79] gi|255654190|ref|ZP_05399599.1| 30S ribosomal protein S4 [Clostridium difficile QCD-23m63] gi|260681874|ref|YP_003213159.1| 30S ribosomal protein S4 [Clostridium difficile CD196] gi|260685472|ref|YP_003216605.1| 30S ribosomal protein S4 [Clostridium difficile R20291] gi|296449771|ref|ZP_06891540.1| 30S ribosomal protein S4 [Clostridium difficile NAP08] gi|296877835|ref|ZP_06901857.1| 30S ribosomal protein S4 [Clostridium difficile NAP07] gi|122974220|sp|Q18CI6|RS4_CLOD6 RecName: Full=30S ribosomal protein S4 gi|115249105|emb|CAJ66916.1| 30S ribosomal protein S4 [Clostridium difficile] gi|260208037|emb|CBA60237.1| 30S ribosomal protein S4 [Clostridium difficile CD196] gi|260211488|emb|CBE01627.1| 30S ribosomal protein S4 [Clostridium difficile R20291] gi|296261369|gb|EFH08195.1| 30S ribosomal protein S4 [Clostridium difficile NAP08] gi|296431135|gb|EFH16960.1| 30S ribosomal protein S4 [Clostridium difficile NAP07] Length = 207 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR G L+ + K + R+Y PG HGQ RK K S +GLQLR Sbjct: 1 MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRK-KVSNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR++++ A+ G NL+S LE RLD +VYR + ARQ Sbjct: 60 KQKVKRIYGVL-ETQFRNLYERAENMPGKAGENLLSLLERRLDNVVYRMGLASSRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H +NG V+I S K GDVIEVK+KS+ A ++ R P+++ N + Sbjct: 119 LVTHGHFTLNGNKVDIPSLIVKVGDVIEVKEKSRSSAKFKNLVEVNSRIAPKWLEANVEG 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M A V +P+ + + +L++E YS+ Sbjct: 179 MTAKVVGVPTR---EDIDLEIAEHLIIELYSK 207 >gi|258622736|ref|ZP_05717754.1| 30S ribosomal protein S4 [Vibrio mimicus VM573] gi|262166593|ref|ZP_06034330.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus VM223] gi|258584924|gb|EEW09655.1| 30S ribosomal protein S4 [Vibrio mimicus VM573] gi|262026309|gb|EEY44977.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus VM223] Length = 202 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 122/207 (58%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 IYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNG+ VN+ S+ DV+ +++K+K+ + + A ++AE R+ P +I V+ + M TF Sbjct: 119 ILVNGKVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDVNTMEGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + L+VE YS+ Sbjct: 179 KRLPERSD---LSADINEQLIVELYSK 202 >gi|71905986|ref|YP_283573.1| 30S ribosomal protein S4 [Dechloromonas aromatica RCB] gi|90101686|sp|Q47J78|RS4_DECAR RecName: Full=30S ribosomal protein S4 gi|71845607|gb|AAZ45103.1| SSU ribosomal protein S4P [Dechloromonas aromatica RCB] Length = 209 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + RSY PG HGQ+ ++ S +G+ LRA Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRSYAPGQHGQKSGARLSDYGVHLRA 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR F EADR +G T NL+ LE+RLD++ YR F + +RQ Sbjct: 61 KQKIRRVYGVL-EGQFRKTFAEADRRKGQTGENLLQLLEARLDSVAYRMGFGASRSESRQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H +LVNG+ VNI S+ K GDV+++ +++ A + AE R PE+ISV+ Sbjct: 120 VVRHNGILVNGKRVNIPSFIVKPGDVVQLTDRARASLRCKAALEAAESRGFPEWISVDVK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF +P + P + LV+E YS+ Sbjct: 180 EGKGTFKAMPQRSE---LPATLNEGLVIELYSK 209 >gi|24380465|ref|NP_722420.1| 30S ribosomal protein S4 [Streptococcus mutans UA159] gi|290581395|ref|YP_003485787.1| 30S ribosomal protein S4 [Streptococcus mutans NN2025] gi|26399366|sp|P59133|RS4_STRMU RecName: Full=30S ribosomal protein S4 gi|24378494|gb|AAN59726.1|AE015034_7 30S ribosomal protein S4 [Streptococcus mutans UA159] gi|254998294|dbj|BAH88895.1| 30S ribosomal protein S4 [Streptococcus mutans NN2025] Length = 203 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKKSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G +N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKGGILGYNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + P ++S + D + + Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVESV-VGRPAFVSFDADKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|296105004|ref|YP_003615150.1| 30S ribosomal protein S4 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059463|gb|ADF64201.1| 30S ribosomal protein S4 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 202 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 125/207 (60%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T +RQ V+H+ Sbjct: 60 IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 ++VNGR VNI SY+ K DV+ +++K+K+ + V A +LAE R+ P ++ V+ M TF Sbjct: 119 IMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + +L+VE YS+ Sbjct: 179 KRQPERSD---LSADINEHLIVELYSK 202 >gi|317153933|ref|YP_004121981.1| 30S ribosomal protein S4 [Desulfovibrio aespoeensis Aspo-2] gi|316944184|gb|ADU63235.1| ribosomal protein S4 [Desulfovibrio aespoeensis Aspo-2] Length = 208 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K K+ RR G L+ + K R Y PG H R + K S + +QLR Sbjct: 1 MARYTEAKCKLCRREGTKLFLKGDRCYTDKCAYEKRPYPPG-HAGRMRHKMSDYAVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I E +FR+ ++ AD +G T HNL+ LE RLD +++R F + ARQ Sbjct: 60 KQKVRRMYG-ILEGQFRAYYERADGMKGVTGHNLLMLLERRLDNVIFRLGFANSRDQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NGR VN+ S + K DVI+V+++++++ + EA + +A R P+++ + Sbjct: 119 LVRHGIFQLNGRRVNVPSMQVKAEDVIQVREEARKIPVINEAQEVIARRGCPDWLESDGA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N T +PS + L+VE YS+ Sbjct: 179 NFKGTVKAMPSRDN---IQFPINEQLIVELYSK 208 >gi|146329810|ref|YP_001210128.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A] gi|172047329|sp|A5EX95|RS4_DICNV RecName: Full=30S ribosomal protein S4 gi|146233280|gb|ABQ14258.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A] Length = 206 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K ++ RR G +L + P ++ PG HG R+ + S +G QLR KQ Sbjct: 1 MARYIGPKCRLARREGVDLELKSGVRPSESKCNMNAAPGQHG-GRRGRLSDYGGQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + E++FR+ +K+A + +G T NL+ LE RLD +VYR + T ARQ V Sbjct: 60 KLKRTYGVL-ERQFRNYYKKAVQQKGSTGENLLILLEQRLDNVVYRMGYGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H + VNG+ V I SY+ + D++ V+++S++ + A ++A +R ++I V+ M Sbjct: 119 SHGAIEVNGQRVTIASYQVQAEDIVSVREQSRKQIRIQSALEIAKQRGFVDWIEVDAAKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + + +LVVE YS+ Sbjct: 179 SGQFKRVPER---IDLSADINESLVVELYSK 206 >gi|254416392|ref|ZP_05030145.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420] gi|196176830|gb|EDX71841.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420] Length = 202 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+G+ KSP RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVVRRLGDLPGLTRKSP--RRSYPPGQHGQARRKRSEY-AIRLEEKQKLRY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ ++A R+ G T L+ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VTEKQLLRYVRKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V+VNGR VNI SY+C+ GDVI VK + V + + ++P ++ + Sbjct: 117 VMVNGREVNIASYQCRPGDVIMVKDNERSRRLVEKNLEYPGLANLPSHLEFDKKTFTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVEFYSR Sbjct: 177 NGMIER---EWVALQINELLVVEFYSR 200 >gi|82701924|ref|YP_411490.1| 30S ribosomal protein S4 [Nitrosospira multiformis ATCC 25196] gi|90101698|sp|Q2YAX3|RS4_NITMU RecName: Full=30S ribosomal protein S4 gi|82409989|gb|ABB74098.1| SSU ribosomal protein S4P [Nitrosospira multiformis ATCC 25196] Length = 208 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + R+Y PG HGQ + + S +G+QLR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRNYAPGQHGQ-KSGRLSDYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++FR+ ++ A+R RG T NL+ LE RLDT+ YR F + ARQ Sbjct: 60 KQKLRRIYGVL-ERQFRNGYELAERQRGVTGENLLQLLECRLDTVSYRMGFGASRSEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H +LVNGR +NI SY+ K GDVIEV +K+K + + + AE R PE++ V+ Sbjct: 119 IVRHNGILVNGRRINIPSYQVKPGDVIEVAEKAKNHLRIKASVEAAEQRHFPEWLEVDTK 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF P P + +LV+E YS+ Sbjct: 179 AMKGTFKNKPERSD---LPSSINESLVIELYSK 208 >gi|302871525|ref|YP_003840161.1| ribosomal protein S4 [Caldicellulosiruptor obsidiansis OB47] gi|312127253|ref|YP_003992127.1| 30S ribosomal protein S4 [Caldicellulosiruptor hydrothermalis 108] gi|302574384|gb|ADL42175.1| ribosomal protein S4 [Caldicellulosiruptor obsidiansis OB47] gi|311777272|gb|ADQ06758.1| ribosomal protein S4 [Caldicellulosiruptor hydrothermalis 108] Length = 208 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MSK ++ RR G L+ + K R Y PG HGQ RK Y G+QLR Sbjct: 1 MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H H VNGR+VNI SY K GDVIEV ++SK +E + A++ P+++ + + Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLEKDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V + +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208 >gi|116494737|ref|YP_806471.1| ribosomal protein S4 [Lactobacillus casei ATCC 334] gi|191638248|ref|YP_001987414.1| 30S ribosomal protein S4 [Lactobacillus casei BL23] gi|239631669|ref|ZP_04674700.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066295|ref|YP_003788318.1| 30S ribosomal protein L4 [Lactobacillus casei str. Zhang] gi|122263845|sp|Q039U3|RS4_LACC3 RecName: Full=30S ribosomal protein S4 gi|226699078|sp|B3WDV5|RS4_LACCB RecName: Full=30S ribosomal protein S4 gi|116104887|gb|ABJ70029.1| SSU ribosomal protein S4P [Lactobacillus casei ATCC 334] gi|190712550|emb|CAQ66556.1| 30S ribosomal protein S4 [Lactobacillus casei BL23] gi|239526134|gb|EEQ65135.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438702|gb|ADK18468.1| Ribosomal protein S4 [Lactobacillus casei str. Zhang] gi|327382278|gb|AEA53754.1| 30S ribosomal protein S4 [Lactobacillus casei LC2W] gi|327385474|gb|AEA56948.1| 30S ribosomal protein S4 [Lactobacillus casei BD-II] Length = 203 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G +L G K + R Y PG HG + K S +G QLR KQK++ Sbjct: 1 MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F A + + T N + LE+RLD +V+R + ARQ VNH Sbjct: 60 MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI ++++S+ LA V EA + P Y++ + + Sbjct: 119 HITVDGKRVDIPSYEVEPGQVIALRERSQNLAIVNEAIE-NTVSRPAYVTFDDTKKTGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + P + +LVVE+Y Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199 >gi|148543735|ref|YP_001271105.1| 30S ribosomal protein S4 [Lactobacillus reuteri DSM 20016] gi|194468296|ref|ZP_03074282.1| ribosomal protein S4 [Lactobacillus reuteri 100-23] gi|227363285|ref|ZP_03847417.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM2-3] gi|227544238|ref|ZP_03974287.1| 30S ribosomal protein S4 [Lactobacillus reuteri CF48-3A] gi|300908234|ref|ZP_07125700.1| 30S ribosomal protein S4 [Lactobacillus reuteri SD2112] gi|325682107|ref|ZP_08161625.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM4-1A] gi|172048234|sp|A5VIU4|RS4_LACRD RecName: Full=30S ribosomal protein S4 gi|148530769|gb|ABQ82768.1| SSU ribosomal protein S4P [Lactobacillus reuteri DSM 20016] gi|194453149|gb|EDX42047.1| ribosomal protein S4 [Lactobacillus reuteri 100-23] gi|227071741|gb|EEI10032.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM2-3] gi|227185791|gb|EEI65862.1| 30S ribosomal protein S4 [Lactobacillus reuteri CF48-3A] gi|300894661|gb|EFK88017.1| 30S ribosomal protein S4 [Lactobacillus reuteri SD2112] gi|324978751|gb|EGC15700.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM4-1A] Length = 201 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ RR+G +L G K + R+Y PG HG+ R+ K S +G QLR KQK++ Sbjct: 1 MSRYTGPSWRVSRRLGVSLSGTGKE-LARRAYAPGDHGRDRRGKLSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + + T N ++ LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MTERQFSNLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G +I V+ KSK L + A + A P Y+ + D + Sbjct: 119 HITVDGKRVDIPSYEVKVGQIIAVRDKSKNLDIIKNAVE-AVVSRPSYVDFDADKLEGKL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ + L+VEFY++ Sbjct: 178 NRIPAR---EDMNADIDEALIVEFYNK 201 >gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202] gi|282855171|ref|ZP_06264503.1| ribosomal protein S4 [Propionibacterium acnes J139] gi|289424812|ref|ZP_06426594.1| ribosomal protein S4 [Propionibacterium acnes SK187] gi|289427659|ref|ZP_06429371.1| ribosomal protein S4 [Propionibacterium acnes J165] gi|295131353|ref|YP_003582016.1| ribosomal protein S4 [Propionibacterium acnes SK137] gi|61215507|sp|Q6A6R0|RS4_PROAC RecName: Full=30S ribosomal protein S4 gi|50840886|gb|AAT83553.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202] gi|282581759|gb|EFB87144.1| ribosomal protein S4 [Propionibacterium acnes J139] gi|289154775|gb|EFD03458.1| ribosomal protein S4 [Propionibacterium acnes SK187] gi|289159150|gb|EFD07342.1| ribosomal protein S4 [Propionibacterium acnes J165] gi|291375309|gb|ADD99163.1| ribosomal protein S4 [Propionibacterium acnes SK137] gi|313763204|gb|EFS34568.1| ribosomal protein S4 [Propionibacterium acnes HL013PA1] gi|313773119|gb|EFS39085.1| ribosomal protein S4 [Propionibacterium acnes HL074PA1] gi|313793291|gb|EFS41349.1| ribosomal protein S4 [Propionibacterium acnes HL110PA1] gi|313801065|gb|EFS42333.1| ribosomal protein S4 [Propionibacterium acnes HL110PA2] gi|313808806|gb|EFS47260.1| ribosomal protein S4 [Propionibacterium acnes HL087PA2] gi|313810400|gb|EFS48114.1| ribosomal protein S4 [Propionibacterium acnes HL083PA1] gi|313812264|gb|EFS49978.1| ribosomal protein S4 [Propionibacterium acnes HL025PA1] gi|313816541|gb|EFS54255.1| ribosomal protein S4 [Propionibacterium acnes HL059PA1] gi|313817985|gb|EFS55699.1| ribosomal protein S4 [Propionibacterium acnes HL046PA2] gi|313819898|gb|EFS57612.1| ribosomal protein S4 [Propionibacterium acnes HL036PA1] gi|313823389|gb|EFS61103.1| ribosomal protein S4 [Propionibacterium acnes HL036PA2] gi|313824860|gb|EFS62574.1| ribosomal protein S4 [Propionibacterium acnes HL063PA1] gi|313828398|gb|EFS66112.1| ribosomal protein S4 [Propionibacterium acnes HL063PA2] gi|313830102|gb|EFS67816.1| ribosomal protein S4 [Propionibacterium acnes HL007PA1] gi|313832626|gb|EFS70340.1| ribosomal protein S4 [Propionibacterium acnes HL056PA1] gi|313837982|gb|EFS75696.1| ribosomal protein S4 [Propionibacterium acnes HL086PA1] gi|314914365|gb|EFS78196.1| ribosomal protein S4 [Propionibacterium acnes HL005PA4] gi|314917685|gb|EFS81516.1| ribosomal protein S4 [Propionibacterium acnes HL050PA1] gi|314919583|gb|EFS83414.1| ribosomal protein S4 [Propionibacterium acnes HL050PA3] gi|314925755|gb|EFS89586.1| ribosomal protein S4 [Propionibacterium acnes HL036PA3] gi|314930173|gb|EFS94004.1| ribosomal protein S4 [Propionibacterium acnes HL067PA1] gi|314957154|gb|EFT01258.1| ribosomal protein S4 [Propionibacterium acnes HL027PA1] gi|314957795|gb|EFT01898.1| ribosomal protein S4 [Propionibacterium acnes HL002PA1] gi|314960835|gb|EFT04936.1| ribosomal protein S4 [Propionibacterium acnes HL002PA2] gi|314963509|gb|EFT07609.1| ribosomal protein S4 [Propionibacterium acnes HL082PA1] gi|314964877|gb|EFT08976.1| ribosomal protein S4 [Propionibacterium acnes HL082PA2] gi|314969908|gb|EFT14006.1| ribosomal protein S4 [Propionibacterium acnes HL037PA1] gi|314973049|gb|EFT17145.1| ribosomal protein S4 [Propionibacterium acnes HL053PA1] gi|314975545|gb|EFT19640.1| ribosomal protein S4 [Propionibacterium acnes HL045PA1] gi|314979766|gb|EFT23860.1| ribosomal protein S4 [Propionibacterium acnes HL072PA2] gi|314984828|gb|EFT28920.1| ribosomal protein S4 [Propionibacterium acnes HL005PA1] gi|314986087|gb|EFT30179.1| ribosomal protein S4 [Propionibacterium acnes HL005PA2] gi|314988702|gb|EFT32793.1| ribosomal protein S4 [Propionibacterium acnes HL005PA3] gi|315077130|gb|EFT49197.1| ribosomal protein S4 [Propionibacterium acnes HL053PA2] gi|315079817|gb|EFT51793.1| ribosomal protein S4 [Propionibacterium acnes HL078PA1] gi|315083184|gb|EFT55160.1| ribosomal protein S4 [Propionibacterium acnes HL027PA2] gi|315086862|gb|EFT58838.1| ribosomal protein S4 [Propionibacterium acnes HL002PA3] gi|315089954|gb|EFT61930.1| ribosomal protein S4 [Propionibacterium acnes HL072PA1] gi|315090476|gb|EFT62452.1| ribosomal protein S4 [Propionibacterium acnes HL110PA4] gi|315093709|gb|EFT65685.1| ribosomal protein S4 [Propionibacterium acnes HL060PA1] gi|315096724|gb|EFT68700.1| ribosomal protein S4 [Propionibacterium acnes HL038PA1] gi|315097952|gb|EFT69928.1| ribosomal protein S4 [Propionibacterium acnes HL059PA2] gi|315100595|gb|EFT72571.1| ribosomal protein S4 [Propionibacterium acnes HL046PA1] gi|315104001|gb|EFT75977.1| ribosomal protein S4 [Propionibacterium acnes HL050PA2] gi|315106038|gb|EFT78014.1| ribosomal protein S4 [Propionibacterium acnes HL030PA1] gi|315109198|gb|EFT81174.1| ribosomal protein S4 [Propionibacterium acnes HL030PA2] gi|327325233|gb|EGE67038.1| ribosomal protein S4 [Propionibacterium acnes HL096PA2] gi|327325529|gb|EGE67328.1| ribosomal protein S4 [Propionibacterium acnes HL103PA1] gi|327332742|gb|EGE74476.1| ribosomal protein S4 [Propionibacterium acnes HL097PA1] gi|327451455|gb|EGE98109.1| ribosomal protein S4 [Propionibacterium acnes HL087PA3] gi|327451570|gb|EGE98224.1| ribosomal protein S4 [Propionibacterium acnes HL092PA1] gi|327451857|gb|EGE98511.1| ribosomal protein S4 [Propionibacterium acnes HL083PA2] gi|328752071|gb|EGF65687.1| ribosomal protein S4 [Propionibacterium acnes HL087PA1] gi|328755531|gb|EGF69147.1| ribosomal protein S4 [Propionibacterium acnes HL025PA2] gi|328756316|gb|EGF69932.1| ribosomal protein S4 [Propionibacterium acnes HL020PA1] gi|328761350|gb|EGF74877.1| ribosomal protein S4 [Propionibacterium acnes HL099PA1] Length = 201 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G KS R Y PG+HG+ R Y LQLR KQK + Sbjct: 1 MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EADR++G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR D+I+V++KSK L ++ A + E RDVP ++ V + Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + V + + +VE YS+ Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201 >gi|258648133|ref|ZP_05735602.1| ribosomal protein S4 [Prevotella tannerae ATCC 51259] gi|260852014|gb|EEX71883.1| ribosomal protein S4 [Prevotella tannerae ATCC 51259] Length = 202 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K +I RR GE ++G K ++ R++ PG HG R+ K S +G+ L KQK K Sbjct: 1 MARYIGPKSRIARRFGEAIFGADK-VLSRRNFPPGQHGNGRRRKTSEYGVMLAEKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A S G T L+ LE RLD +VYR PT AARQ VNHRH Sbjct: 60 TYGVL-EKQFRNMFEKASASNGITGEILLQNLECRLDNVVYRLGIAPTRAAARQLVNHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ I SY K G ++ V++KSK L + ++ ++ + + Sbjct: 119 ITVDGKVTGIASYSVKPGQIVAVREKSKSLEVIADSLAGFNHSKYPWMEWDESAKAGKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P P ++ L+VE YS+ Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201 >gi|119484418|ref|ZP_01619035.1| 30S ribosomal protein S4 [Lyngbya sp. PCC 8106] gi|119457892|gb|EAW39015.1| 30S ribosomal protein S4 [Lyngbya sp. PCC 8106] Length = 202 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K V R+Y PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGDLPGLTRK--VARRAYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ K+A R+ G T L+ LE RLD ++R PTI ARQ VNH H Sbjct: 58 NYG-LSEKQLLRYVKKARRATGSTGQVLLQMLEMRLDNTIFRLGMAPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VN R V++ SY+C+ GDV+ ++ K K V Q +VP ++ ++ + ++A Sbjct: 117 VTVNDRVVDVASYQCRPGDVVGIRNKEKSREMVKANLQYPGLANVPSHLELDKEKLLAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NSVIDR---EWVALQVNELLVVEYYSR 200 >gi|327449339|gb|EGE95993.1| ribosomal protein S4 [Propionibacterium acnes HL013PA2] Length = 201 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G KS R Y PG+HG+ R Y LQLR KQK + Sbjct: 1 MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EADR++ T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 AYGVL-EKQFRRYYEEADRAQSKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR D+I+V++KSK L ++ A + E RDVP ++ V + Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + V + + +VE YS+ Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201 >gi|323339475|ref|ZP_08079754.1| 30S ribosomal protein S4 [Lactobacillus ruminis ATCC 25644] gi|323093089|gb|EFZ35682.1| 30S ribosomal protein S4 [Lactobacillus ruminis ATCC 25644] Length = 202 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HGQ + K S +GLQLR KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYAPGQHGQNNRRKLSEYGLQLREKQKLRM 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++F ++F +A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 TYG-LSERQFANLFVKAGKIREGKHGDNFMILLERRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G VI ++++SK L V +A + P ++S + + M + Sbjct: 119 HITVDGKRVDIPSYEVKPGQVISLRERSKNLQVVKDALEAVVGRAP-FVSFDENKMEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + LVVE+Y++ Sbjct: 178 VRLPEREE---LDANIDEALVVEYYNK 201 >gi|227524306|ref|ZP_03954355.1| 30S ribosomal protein S4 [Lactobacillus hilgardii ATCC 8290] gi|227088537|gb|EEI23849.1| 30S ribosomal protein S4 [Lactobacillus hilgardii ATCC 8290] Length = 231 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G +L G K ++ R Y PG HGQ R+ K S +GLQL+ KQK++ Sbjct: 29 MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRQKLSEYGLQLKEKQKLRY 87 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + R N + LE RLD IVYR T ARQ VNH Sbjct: 88 MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLERRLDNIVYRLGLATTRRQARQLVNHG 146 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G V+ V++KSK L V A + A P+Y++ + D + + Sbjct: 147 HITVDGKRVDIPSYEVKTGQVVSVREKSKDLQVVKNAVE-AVVGRPQYVNFDADKLEGSL 205 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + +L+VE+Y++ Sbjct: 206 VRLPQREE---LDADIDESLIVEYYNK 229 >gi|330833751|ref|YP_004402576.1| 30S ribosomal protein S4 [Streptococcus suis ST3] gi|329307974|gb|AEB82390.1| 30S ribosomal protein S4 [Streptococcus suis ST3] Length = 203 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + + T N + LE RLD +VYR T ARQFVNH Sbjct: 60 SYG-LGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRLGLATTHRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSIKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY++ Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201 >gi|75910501|ref|YP_324797.1| 30S ribosomal protein S4 [Anabaena variabilis ATCC 29413] gi|90101675|sp|Q3M534|RS4_ANAVT RecName: Full=30S ribosomal protein S4 gi|75704226|gb|ABA23902.1| SSU ribosomal protein S4P [Anabaena variabilis ATCC 29413] Length = 202 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KS R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRKKRSEY-AIRLEEKQKLRL 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ + A R G T L+ LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-LTEKQLLRYVRRARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR VNI SY+C+ G+ I V+ K+ V Q ++P ++ + + +V Sbjct: 117 VTVNGRVVNIASYQCRPGEEIAVRDKAPSRKLVENNLQYPGLANLPSHLEFDKNKLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIER---EWVALQVNELLVVEYYSR 200 >gi|34580606|ref|ZP_00142086.1| 30S ribosomal protein S4 [Rickettsia sibirica 246] gi|28261991|gb|EAA25495.1| 30S ribosomal protein S4 [Rickettsia sibirica 246] Length = 224 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 1/200 (0%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 SK+K RR+G +LWG K NTR+Y PG HGQ K S +GL L+AKQ++K +YG ++ Sbjct: 26 SKYKASRRLGVSLWGDGKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 85 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+FR+IF A + +G+T N I LESRLDT+VYR PTIFAARQ V+H H+ +NG+ Sbjct: 86 EKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 145 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 +I S R K GDVIEVK+ KQ+ + E+ + P Y+S + ++ ++R+P+ L Sbjct: 146 KADIASIRLKAGDVIEVKESVKQIPLIQESVSKQGQTTPGYLSFDVPSLTGKYLRVPA-L 204 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 DVPYP + +LV+E YSR Sbjct: 205 SDVPYPFEAEVHLVIELYSR 224 >gi|309778473|ref|ZP_07673375.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 3_1_53] gi|308913769|gb|EFP59607.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 3_1_53] Length = 200 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G ++ + R+Y PG HG ++ K + +G QLR KQK++ Sbjct: 1 MSRINGPVWKTSRRLGFSI-LETGEELQKRAYAPGQHGPTKRVKLTNYGQQLREKQKIRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F + F +A + +G T N + LESRLD ++YR F T AARQ VNH H Sbjct: 60 MYG-LNERQFYNTFMKASKMKGVTGDNFLGLLESRLDNLIYRMGFARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I S+ K G V+EVK+KSK + ++ EA + V ++ V+ D T++ Sbjct: 119 ILVNGKKVDIPSFIAKPGMVVEVKEKSKSMKAINEAQEATLNTV-AFVDVDKDAKKGTYL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + LVVEFY+R Sbjct: 178 RLPERSE---LNAEFNELLVVEFYNR 200 >gi|222529703|ref|YP_002573585.1| 30S ribosomal protein S4 [Caldicellulosiruptor bescii DSM 6725] gi|254764564|sp|B9MKF4|RS4_ANATD RecName: Full=30S ribosomal protein S4 gi|222456550|gb|ACM60812.1| ribosomal protein S4 [Caldicellulosiruptor bescii DSM 6725] Length = 208 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MSK ++ RR G L+ + K R Y PG HGQ RK Y G+QLR Sbjct: 1 MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARL 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H H VNGR+VNI SY K GDVIEV ++SK +E + A++ P+++ + + Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLEKDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V + +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208 >gi|319940172|ref|ZP_08014525.1| 30S ribosomal protein S4 [Streptococcus anginosus 1_2_62CV] gi|319810643|gb|EFW06973.1| 30S ribosomal protein S4 [Streptococcus anginosus 1_2_62CV] Length = 203 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G N + LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SYR G VI V++KS ++ ++LEA + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYRVSVGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVE+Y++ Sbjct: 178 TRLPERDE---INPEINEALVVEYYNK 201 >gi|303328069|ref|ZP_07358508.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3] gi|302861895|gb|EFL84830.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3] Length = 208 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K +K +I RR G L+ + K + R Y PG HG+ RK Y +QLR Sbjct: 1 MAKYTEAKCRICRREGCKLFLKGDRCFTDKCAYDRRPYAPGQHGRARKKVSEY-AVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + E++F F++A+ +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKTRRAYGVL-ERQFHGYFEKAEMQKGVTGTNLLVILERRLDNVVYRLGFANSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NG V I S + K GD +EV +K++++ + EA + +A R P ++ + Sbjct: 119 LVRHGIFTLNGHKVTIPSLQVKVGDSVEVPEKNRKIPVLAEAQEVIARRGCPGWLEADGA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P D+ +PV L+VE YS+ Sbjct: 179 AFKGTVKALPQR-DDIQFPV--NEQLIVELYSK 208 >gi|113474211|ref|YP_720272.1| 30S ribosomal protein S4 [Trichodesmium erythraeum IMS101] gi|123352777|sp|Q119M5|RS4_TRIEI RecName: Full=30S ribosomal protein S4 gi|110165259|gb|ABG49799.1| SSU ribosomal protein S4P [Trichodesmium erythraeum IMS101] Length = 202 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KS R+Y PG HGQ R+ + Y ++L KQK+ Sbjct: 1 MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRRKRSEY-AIRLEEKQKLLY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++ K+A R+ G T L+ LE RLD V+R PTI +ARQ VNH H Sbjct: 58 NYG-VCERQLLRYVKKARRAGGSTGKVLLELLEMRLDNTVFRLGMAPTIPSARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ V+I SY+CK G+VI VK+K K V Q ++P ++ + + +V Sbjct: 117 VTVNGKVVSIASYQCKPGEVISVKEKEKSKEMVKTNLQYPGLANIPSHLEFDKNKLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + L+VE+YSR Sbjct: 177 NGIVER---EWVALQINELLIVEYYSR 200 >gi|254517498|ref|ZP_05129554.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA] gi|226911247|gb|EEH96448.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA] Length = 206 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K RSY PG HG +K +Y G+QLR Sbjct: 1 MARYTGATCRLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGAAKKKLSNY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + E +FR+ +++AD +G T NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKARRIYGVL-ESQFRAYYEKADHMKGITGENLLKLLEMRLDNVVYRLGYGASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 VNH H LVN + V+I SYR D I V +KS+ + + +P+++ N +N Sbjct: 119 LVNHGHFLVNDKKVDIPSYRVSVNDEITVTEKSRGTEKFKTFIENP-KTLPKWLEANVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V PS +D+ PV L+VE YS+ Sbjct: 178 YSGKIVAEPSR-EDIDVPV--NETLIVELYSK 206 >gi|218439509|ref|YP_002377838.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 7424] gi|226697832|sp|B7KK85|RS4_CYAP7 RecName: Full=30S ribosomal protein S4 gi|218172237|gb|ACK70970.1| ribosomal protein S4 [Cyanothece sp. PCC 7424] Length = 202 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + ++ RR+GE K+ R+Y PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MARYRGPRLRVVRRLGELPGLTRKNA--RRAYPPGQHGQNRRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ + A R+ G T L+ LE RLD V+R TI AARQ VNH H Sbjct: 58 NYG-VSEKQLIRYVRRARRATGSTGQTLLQLLEMRLDNTVFRLGMAGTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN R V+I SY+C+ GDVI+V+ + K V + ++P ++ + + ++ Sbjct: 117 ILVNDRVVDIASYQCRPGDVIKVRDQDKSRKLVQANMEYPGLANLPSHLEFDKNTLIGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIER---EWIALNINELLVVEYYSR 200 >gi|223936404|ref|ZP_03628316.1| ribosomal protein S4 [bacterium Ellin514] gi|223894922|gb|EEF61371.1| ribosomal protein S4 [bacterium Ellin514] Length = 202 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I RR G ++G K + R+YGPG+HG + + K + +GL L KQK++ Sbjct: 1 MARYTGPRVRISRRFGIPIFGPTKY-LERRNYGPGVHGPKSRRKHTDYGLGLIEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + E++FR +++ A + RG T ++ LE+RLD +V+ F T AARQ V+H H Sbjct: 60 YYG-LMERQFRGVYERALKRRGVTGEQMLQILETRLDNVVFHLGFANTRAAARQLVSHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 V VNGR VNI S+ K DVIE K + + + + R VP+++S+N + + Sbjct: 119 VRVNGRKVNIPSFALKVNDVIEAKDSNVSRQLATKNLETSTNRSVPDWLSLNKEALKGVV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +RIPS + P VVEFYSR Sbjct: 179 MRIPSRDEIQPIA---NEQAVVEFYSR 202 >gi|148655311|ref|YP_001275516.1| 30S ribosomal protein S4 [Roseiflexus sp. RS-1] gi|172048078|sp|A5USG3|RS4_ROSS1 RecName: Full=30S ribosomal protein S4 gi|148567421|gb|ABQ89566.1| SSU ribosomal protein S4P [Roseiflexus sp. RS-1] Length = 206 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 110/210 (52%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 M++ K+ RR+G + + + + R + PG HG R+ + S +GLQL KQK + Sbjct: 1 MARYRGPVGKVSRRLGIGITDKGQRILAKRPFPPGQHGPSARRRQVSDYGLQLLEKQKAR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR IF++A R G+T L LE RLD +VYR F T ARQ V+H Sbjct: 61 YVYGVL-ERQFRRIFEKAQRFPGETGAYLFILLERRLDNVVYRLGFATTRAQARQLVSHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMV 176 H+ VNGR NI SY + G+ I V+ +S++ LA P+++ +N ++ Sbjct: 120 HITVNGRKTNIPSYTVRVGETIAVRPESRRRTYFKNLIDSGALARHKTPDWLRLNPADLS 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P P + L+VEFYSR Sbjct: 180 GEVVAMPRREDAEP---GINEQLIVEFYSR 206 >gi|119718096|ref|YP_925061.1| 30S ribosomal protein S4 [Nocardioides sp. JS614] gi|152112238|sp|A1SNI9|RS4_NOCSJ RecName: Full=30S ribosomal protein S4 gi|119538757|gb|ABL83374.1| SSU ribosomal protein S4P [Nocardioides sp. JS614] Length = 202 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G S R Y PG HG+ R + Y LQLR KQK + Sbjct: 1 MARYTGPMTKKSRRLGVDLVG-GDSAYERRPYPPGQHGRGRIKESEYL-LQLREKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F + + EA R G T NL+ LE RLD +VYRA F T ARQ V H H Sbjct: 59 TYGVL-EKQFHNYYTEASRRAGKTGDNLLQLLECRLDNVVYRAGFARTRRHARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VNG+ V+I S++ DVI+V++KS ++ + A + ER VP ++ M Sbjct: 118 FKVNGKKVDIPSFQVTAHDVIDVREKSLEMTPFIVARETHGERVVPAWLEAIPSRMRVLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VE+YS+ Sbjct: 178 HQLPVRAQ---IDIPVQEQLIVEYYSK 201 >gi|312793912|ref|YP_004026835.1| 30S ribosomal protein S4 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181052|gb|ADQ41222.1| ribosomal protein S4 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 208 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MSK ++ RR G L+ + K R Y PG HGQ RK Y G+QLR Sbjct: 1 MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H H VNGR+VNI SY K GDVIEV ++SK +E + A++ P+++ + + Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLDKDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V + +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208 >gi|313836059|gb|EFS73773.1| ribosomal protein S4 [Propionibacterium acnes HL037PA2] gi|314929595|gb|EFS93426.1| ribosomal protein S4 [Propionibacterium acnes HL044PA1] gi|314970518|gb|EFT14616.1| ribosomal protein S4 [Propionibacterium acnes HL037PA3] gi|328906196|gb|EGG25971.1| 30S ribosomal protein S4 [Propionibacterium sp. P08] Length = 201 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G KS R Y PG+HG+ R Y LQLR KQK + Sbjct: 1 MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EADR++G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR D+I+V++KSK L ++ A + E RD+P ++ V + Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLHPIVVARETFETRDIPAWLEVRPNKGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + + + + +VE YS+ Sbjct: 178 HQLPTRDQII---IDVNEQAIVELYSK 201 >gi|269959712|ref|ZP_06174092.1| 30S ribosomal protein S4 [Vibrio harveyi 1DA3] gi|269835635|gb|EEZ89714.1| 30S ribosomal protein S4 [Vibrio harveyi 1DA3] Length = 202 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 MYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNG+ VN+ S++ DV+ +++K+KQ A + A ++AE R+ P +I V+ M TF Sbjct: 119 ILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVAEQREKPTWIEVDGGKMEGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + L+VE YS+ Sbjct: 179 KRMPERSD---LSADINEQLIVELYSK 202 >gi|148270449|ref|YP_001244909.1| 30S ribosomal protein S4 [Thermotoga petrophila RKU-1] gi|170289156|ref|YP_001739394.1| RNA-binding S4 domain-containing protein [Thermotoga sp. RQ2] gi|281412756|ref|YP_003346835.1| ribosomal protein S4 [Thermotoga naphthophila RKU-10] gi|172047881|sp|A5IMB0|RS4_THEP1 RecName: Full=30S ribosomal protein S4 gi|226695093|sp|B1LBL3|RS4_THESQ RecName: Full=30S ribosomal protein S4 gi|147735993|gb|ABQ47333.1| SSU ribosomal protein S4P [Thermotoga petrophila RKU-1] gi|170176659|gb|ACB09711.1| RNA-binding S4 domain protein [Thermotoga sp. RQ2] gi|281373859|gb|ADA67421.1| ribosomal protein S4 [Thermotoga naphthophila RKU-10] Length = 209 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + K + R Y PG HGQ R++K + +G+QLRA Sbjct: 1 MARYTGPLCKLCRREGMKLYLKGERCYTDKCAFDRRPYAPGQHGQ-RRAKLTQYGIQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ +K+ YG I E++F ++A + GDT NLI LE+RLD +VYR F ARQ Sbjct: 60 KQTVKRIYG-ILERQFERYVEKAMQKAGDTRENLIQILEARLDNVVYRMGFAINRRQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 VNH H LVNG+ VNI SY K DV+E+++KS+ L + +A + ER V +I V++D Sbjct: 119 LVNHGHFLVNGKKVNIPSYLLKPNDVVELREKSRDLEVIKKAVEANKERSVVPWIEVDYD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N TF+R PS + PV +Q V+EFYSR Sbjct: 179 NYRGTFLRYPSLEEVTDLPVDLQT--VIEFYSR 209 >gi|225165488|ref|ZP_03727314.1| ribosomal protein S4 [Opitutaceae bacterium TAV2] gi|224800265|gb|EEG18669.1| ribosomal protein S4 [Opitutaceae bacterium TAV2] Length = 202 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++ RR + L+G K R Y PG HG + + K S + L KQK++ Sbjct: 1 MARYTGPTTRLSRRFNQPLFGATK-AYEKRPYPPGQHGPKLRRKVSEYAAGLNEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR F+ A R RG T + LE+RLD+I+Y F + AARQ V H H Sbjct: 60 VYG-LLERQFRRTFEAAKRERGVTGERFLQLLETRLDSIIYLLGFARSRAAARQLVGHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG V+I SY + GD +E+K + + R+VP ++++N + A Sbjct: 119 VRVNGHKVDIASYAVQVGDELEIKNAAGSRQLAQRNLEETRARNVPGWLTLNAEAFKAVV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ + P + L+VEFYSR Sbjct: 179 NRLPTREEMAP---DINEQLIVEFYSR 202 >gi|326203868|ref|ZP_08193730.1| ribosomal protein S4 [Clostridium papyrosolvens DSM 2782] gi|325985966|gb|EGD46800.1| ribosomal protein S4 [Clostridium papyrosolvens DSM 2782] Length = 208 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR GE L+ + K V R Y PG HGQ +K Y G+QLR Sbjct: 1 MARYTDASCRLCRREGEKLFLKGERCYTDKCSVARRPYAPGQHGQAKKKMSEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 K K++++YG + E +F F+ A R +G T NL+ LE+RLD +VYR + +RQ Sbjct: 60 KAKVRRFYGVL-EGQFSQYFEMASRRKGITGENLLQILETRLDNVVYRLGLGTSRPESRQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173 V H H +NG+ VNI SY K GDVI V KSK V ++A VP+++ N + Sbjct: 119 LVTHGHFTINGKRVNIPSYLIKVGDVIAVADKSKSSPKVKSIREIAGGKVVPKWLEFNEE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V V +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGKVVALPAR-EDIDLP--IREHLIVELYSK 208 >gi|314924148|gb|EFS87979.1| ribosomal protein S4 [Propionibacterium acnes HL001PA1] Length = 201 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G KS R Y PG+HG+ R Y LQLR KQK + Sbjct: 1 MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EADR++G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR D+I+V++KSK ++ A + E RDVP ++ V + Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDHPPIVIARETFETRDVPAWLEVRPNKGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + V + + +VE YS+ Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201 >gi|313901168|ref|ZP_07834656.1| ribosomal protein S4 [Clostridium sp. HGF2] gi|312954126|gb|EFR35806.1| ribosomal protein S4 [Clostridium sp. HGF2] Length = 200 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G ++ + R+Y PG HG ++ K + +G QLR KQK++ Sbjct: 1 MSRINGPVWKTSRRLGFSI-LETGEELQKRAYAPGQHGPTKRVKLTNYGQQLREKQKIRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F + F +A + +G T N + LESRLD +VYR F T AARQ VNH H Sbjct: 60 MYG-LNERQFYNTFIKASKMKGVTGDNFLGLLESRLDNLVYRMGFARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I S+ K G V+E+K+KS+ + ++ EA + V +I V+ D T++ Sbjct: 119 ILVNGKKVDIPSFIAKPGMVVEIKEKSRDMKAINEALEATLNTV-AFIDVDKDAKKGTYL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + LVVEFY+R Sbjct: 178 RLPERSE---LNSEFNELLVVEFYNR 200 >gi|282896815|ref|ZP_06304821.1| Ribosomal protein S4 [Raphidiopsis brookii D9] gi|281198224|gb|EFA73114.1| Ribosomal protein S4 [Raphidiopsis brookii D9] Length = 202 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE KS R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGELPGLTRKSA--RRAYAPGQHGQNRKKRSEY-AIRLEEKQKLRL 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ ++A R G T L+ LE RLD V+R PTI AARQ V+H H Sbjct: 58 NYG-LTEKQMLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTISAARQLVSHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V +NGR VNI SY+C+ G+ I VK K V Q ++P ++ + + + Sbjct: 117 VTINGRVVNIASYQCRPGEEIGVKDKEASRKLVENNLQYPGLANLPNHLEFDKNKLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIER---EWVALQVNELLVVEYYSR 200 >gi|297567257|ref|YP_003686229.1| 30S ribosomal protein S4 [Meiothermus silvanus DSM 9946] gi|296851706|gb|ADH64721.1| ribosomal protein S4 [Meiothermus silvanus DSM 9946] Length = 205 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 119/209 (56%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + KI RR+G N+ K ++ R Y PG HGQ+R +PS + ++LR KQK+ Sbjct: 1 MGRYRGPIVKIARRLGVNIAETEKVQKYLDRRPYAPGQHGQKRARRPSDYAVRLREKQKL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y + E+ FR++F+EA + +G T + LESRLD +V+R T ARQFV H Sbjct: 61 RFIYD-MGERSFRNLFEEASKKKGVTGTVFLQLLESRLDNVVFRLGIASTRRQARQFVRH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVA 177 H+LVNG+ VNI YR K+GD I V +K++ + + E + R ++ + M Sbjct: 120 GHILVNGKRVNIAGYRVKQGDTIAVSKKAQDIPFIKENIERFKNRKTFRWLEFDPTTMSG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F+R+P +D+ PV NLV+EFYSR Sbjct: 180 KFLRLPDR-EDLALPV--NENLVIEFYSR 205 >gi|15644222|ref|NP_229273.1| 30S ribosomal protein S4 [Thermotoga maritima MSB8] gi|7388196|sp|Q9X1I3|RS4_THEMA RecName: Full=30S ribosomal protein S4 gi|4982039|gb|AAD36541.1|AE001798_6 ribosomal protein S4 [Thermotoga maritima MSB8] Length = 209 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + K + R Y PG HGQ R++K + +G+QLRA Sbjct: 1 MARYTGPLCKLCRREGMKLYLKGERCYTDKCAFDRRPYAPGQHGQ-RRTKLTQYGIQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ +K+ YG I E++F ++A + GDT NLI LE+RLD +VYR F ARQ Sbjct: 60 KQTVKRIYG-ILERQFERYVEKAMQKAGDTRENLIQILEARLDNVVYRMGFAINRRQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 VNH H LVNG+ VNI SY + DV+EV++KS+ L + +A + ER + +I V++D Sbjct: 119 LVNHGHFLVNGKKVNIPSYLLRPNDVVEVREKSRDLEVIKKAIEANKERSIVPWIEVDYD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N TF+R PS + PV +Q V+EFYSR Sbjct: 179 NYRGTFLRYPSLEEVTDLPVDLQT--VIEFYSR 209 >gi|312622072|ref|YP_004023685.1| 30S ribosomal protein S4 [Caldicellulosiruptor kronotskyensis 2002] gi|312202539|gb|ADQ45866.1| ribosomal protein S4 [Caldicellulosiruptor kronotskyensis 2002] Length = 208 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MSK ++ RR G L+ + K R Y PG HGQ RK Y G+QLR Sbjct: 1 MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARL 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H H VNGR+VNI SY K GDVIEV ++SK +E + A++ P+++ + + Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLDKDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V + +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208 >gi|312135469|ref|YP_004002807.1| 30S ribosomal protein S4 [Caldicellulosiruptor owensensis OL] gi|311775520|gb|ADQ05007.1| ribosomal protein S4 [Caldicellulosiruptor owensensis OL] Length = 208 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MSK ++ RR G L+ + K R Y PG HGQ RK Y G+QLR Sbjct: 1 MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V+H H VNGR+VNI SY K GDVIEV ++SK +E + A++ P+++ + + Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLEKDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N++ + +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLIGKVIALPTR-EDIDMP--IREHLIVELYSK 208 >gi|160915194|ref|ZP_02077407.1| hypothetical protein EUBDOL_01202 [Eubacterium dolichum DSM 3991] gi|158432993|gb|EDP11282.1| hypothetical protein EUBDOL_01202 [Eubacterium dolichum DSM 3991] Length = 200 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G ++ + R+Y PG HG ++ K + +GLQLR KQK++ Sbjct: 1 MSRINGPVWKTSRRLGFSI-LETGEELQRRAYAPGQHGPTKRVKLTQYGLQLREKQKIRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F ++F +A + +G N ++ LESRLD +VYR F T AARQ VNH H Sbjct: 60 MYG-LNERQFYNLFTKASKMKGVKGDNFLALLESRLDNLVYRMGFARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I SY K G VIEVK+KSK L + EA + + V ++ VN D T++ Sbjct: 119 ILVNGKKVDIPSYIAKPGAVIEVKEKSKNLQVINEALEASLNTV-AFVDVNKDAKKGTYL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY+R Sbjct: 178 RLPERNE---LNSEINELLVVEFYNR 200 >gi|115376109|ref|ZP_01463354.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] gi|310821021|ref|YP_003953379.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] gi|115366924|gb|EAU65914.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] gi|309394093|gb|ADO71552.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] Length = 208 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +S +I RR ++ + K + R Y PG HGQ R Y G+QLR Sbjct: 1 MARYTASACRICRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGRVKFSGY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR + A ++G T NL+ LE RLD +V+R F T ARQ Sbjct: 60 KQKVKRMYG-LLESQFRGYYHRASAAKGKTGENLLQQLELRLDNVVFRMGFADTRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNG+ VNI S+ K G +EV +KS+++ + EA + + R VP++I ++ Sbjct: 119 LVRHGHFSVNGKKVNIPSFAVKPGSSVEVVEKSRKVLRISEALETVDRRGVPQWIDLDKK 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T +P+ +D+ P +Q L+VE YS+ Sbjct: 179 SFKGTVKTVPNR-EDLTMP--IQEQLIVELYSK 208 >gi|310829557|ref|YP_003961914.1| ribosomal protein S4 [Eubacterium limosum KIST612] gi|308741291|gb|ADO38951.1| ribosomal protein S4 [Eubacterium limosum KIST612] Length = 209 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 115/214 (53%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ + + RR G L+ + K R PG HG +R++K S +GLQLR Sbjct: 1 MARYTEASCRQCRREGMKLYLKGERCYSTNKCAFERRPTPPGQHG-KRRTKLSEYGLQLR 59 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+F F A++ +G T NL+ LE+RLD +VYR + AR Sbjct: 60 EKQKVKRIYGVL-EKQFAHYFDLAEKQKGITGSNLLEILETRLDNVVYRLGLATSRKEAR 118 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNH 172 Q V H H LVNG+ VN+ SY KEGD IEVK KSK+ E + E R V ++S + Sbjct: 119 QLVQHAHFLVNGKKVNVPSYLVKEGDTIEVKAKSKKSPKFKEILEATENRAVAPWLSADL 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D + + P+ V + +L+VE YS+ Sbjct: 179 DTLSGKVIGRPTR---EDIDVEIAEHLIVELYSK 209 >gi|296272961|ref|YP_003655592.1| 30S ribosomal protein S4 [Arcobacter nitrofigilis DSM 7299] gi|296097135|gb|ADG93085.1| ribosomal protein S4 [Arcobacter nitrofigilis DSM 7299] Length = 208 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR+ +L + KS + R + PG HGQRR Y GLQLR Sbjct: 1 MARYRGPVEKIERRLDADLGLKGERRLNGKSALEKRPFAPGQHGQRRTKLSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR FKEA R G+T NLI+ +E RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRKYFKEAARREGNTGSNLITLIEQRLDNVVYRMGFATTRANARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 F H H+LV+G+ V+I S+ K G IE+K+KSK ++ A +L + + E++ V+ D Sbjct: 119 FTTHGHILVDGQKVDIPSFVVKPGQKIEIKEKSKTNPQIVRALELTNQTGMVEWVDVDKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP+ + V + ++ L+VE YS+ Sbjct: 179 KAFGIFTRIPTREEVV---IPVEERLIVELYSK 208 >gi|152993918|ref|YP_001359639.1| 30S ribosomal protein S4 [Sulfurovum sp. NBC37-1] gi|172048747|sp|A6QCS3|RS4_SULNB RecName: Full=30S ribosomal protein S4 gi|151425779|dbj|BAF73282.1| 30S ribosomal protein S4 [Sulfurovum sp. NBC37-1] Length = 208 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 131/213 (61%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +++RR+G +L + KS + R Y PG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGPVERLERRLGVDLGLKGERRLAGKSALEKRPYAPGQHGQ-RRTKISEYGLQLQE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG SEK+FR+++KEA+R G+T LI LE RLD +VYR F T +ARQ Sbjct: 60 KQKAKFMYGT-SEKQFRALYKEANRKEGNTGSILIQLLEQRLDNVVYRMGFATTRASARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 FVNH HVLV+G+ V+I SYR K G IE+++KSK + +L A +L + + E++ V+ + Sbjct: 119 FVNHGHVLVDGKRVDIPSYRVKAGQKIEIREKSKTNSQILRAIELTNQTGMVEWVDVDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + + ++ L+VE YS+ Sbjct: 179 KLFGIFSRVPEREE---IAIPVEERLIVELYSK 208 >gi|312889341|ref|ZP_07748895.1| SSU ribosomal protein S4P [Mucilaginibacter paludis DSM 18603] gi|311298218|gb|EFQ75333.1| SSU ribosomal protein S4P [Mucilaginibacter paludis DSM 18603] Length = 202 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI RR E ++G K + ++Y PG+HG +R+ K S + QL KQK+K Sbjct: 1 MARYTGPKSKIARRFREPIFGPDK-ALERKNYPPGMHGASKRRGKQSEYSTQLMEKQKVK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+F ++F A G T NL+ FLE+RLD VYR PT ARQ V H+ Sbjct: 60 YTYGVL-EKQFENLFHRASSKEGITGENLLKFLEARLDNAVYRLGIAPTRSGARQLVGHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG VNI SY K GDVI V++KSK + S+ + + ++ + N+ F Sbjct: 119 HITVNGEVVNIASYALKAGDVIAVREKSKTMESITTSVAGRRINKHSWLEWDPSNLTGKF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + P ++ NL+VE YS+ Sbjct: 179 LNYPNRDE---IPENIKENLIVELYSK 202 >gi|222099994|ref|YP_002534562.1| 30S ribosomal protein S4 [Thermotoga neapolitana DSM 4359] gi|254764618|sp|B9K8B3|RS4_THENN RecName: Full=30S ribosomal protein S4 gi|221572384|gb|ACM23196.1| 30S ribosomal protein S4 [Thermotoga neapolitana DSM 4359] Length = 209 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K + R Y PG HGQ R+SK + +G+QLRA Sbjct: 1 MARYTGPVCRLCRREGMKLYLKGERCYTDKCAFDRRPYAPGQHGQ-RRSKLTQYGIQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ +K+ YG I E++F ++A + GDT NLI LE+RLD +VYR F ARQ Sbjct: 60 KQTVKRIYG-ILERQFERYVEKAMKRAGDTRENLIQLLEARLDNVVYRMGFAINRRQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 VNH H LVNG+ V+I SY + DV+EV++KS+ + + +A + ER+ +I V+ D Sbjct: 119 LVNHGHFLVNGKKVDIPSYLLRPNDVVEVREKSRDIEVIKKAIEFNRERNTVPWIEVDFD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N TF+R P + PV +Q V+EFYSR Sbjct: 179 NYKGTFLRYPRLEEVTDLPVDLQT--VIEFYSR 209 >gi|159027856|emb|CAO87069.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 202 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+ R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLTRKNA--RRAYAPGQHGQARKKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ ++A R+ G T L+ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VSEKQLVRYVRKARRATGSTGQVLLQLLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR V+I SY+C+ GDVI V+ + + V + ++P ++ + + +V Sbjct: 117 VTVNGRVVDIASYQCRPGDVIGVRNQERSQDLVKRNMEYPGLANLPSHLEFDKNTLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVVER---EWIALSINELLVVEYYSR 200 >gi|153952888|ref|YP_001393653.1| 30S ribosomal protein S4 [Clostridium kluyveri DSM 555] gi|219853553|ref|YP_002470675.1| hypothetical protein CKR_0210 [Clostridium kluyveri NBRC 12016] gi|146345769|gb|EDK32305.1| RpsD1 [Clostridium kluyveri DSM 555] gi|219567277|dbj|BAH05261.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 206 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K + ++ RR G L+ + K + R Y PG HGQ RK K S +GLQLR Sbjct: 1 MAKYTGAVCRLCRREGLKLFLKGDRCYTDKCGFSRRGYAPGQHGQGRK-KVSNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + EK+FR + +ADR +G T NL+ LE+RLD +VY+ + + ARQ Sbjct: 60 KQKSKRIYG-LLEKQFRKYYDKADRKKGITGENLLVLLETRLDNVVYKLGYGQSRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H VNGR VNI S++ D I VK SK ++ + +P ++ N +N Sbjct: 119 LVTHGHFKVNGRKVNIPSFKVSVNDTISVKDGSKSSEKFKTFAENP-KTLPTWLEGNIEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R P + V + L+VE YS+ Sbjct: 178 FEGRVIREPMREE---IDVPVNETLIVELYSK 206 >gi|299138173|ref|ZP_07031353.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8] gi|298600103|gb|EFI56261.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8] Length = 210 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 12/214 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLR 53 M++ ++ RR G L+ + K PV R++ PG HGQ +K K +GLQLR Sbjct: 1 MARYTGPVCRLCRRDGTKLFLKGPKCFTDKCPVEKRNFPPGQHGQSKKQKKVVGYGLQLR 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK K+ Y + E +FR+ +++A G T L+ LE+RLD + YR F + AR Sbjct: 61 EKQKAKRIYFTL-ETQFRAYYEKAANRPGVTGELLLQQLETRLDNVCYRLGFALSRRQAR 119 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNH 172 Q V H HV VNGR VNI S++CK GD I +++ SK+L + + L+ ++ +I N Sbjct: 120 QVVRHGHVQVNGRKVNIPSFQCKIGDEIAIREGSKKLVLLEASQDFLSGQNRVGWIDANR 179 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +N+ + +P +DV PV L+VE YS+ Sbjct: 180 ENLSGKIIALPKR-EDVNLPV--NEQLIVELYSK 210 >gi|189501628|ref|YP_001957345.1| RNA-binding S4 domain-containing protein [Candidatus Amoebophilus asiaticus 5a2] gi|226697797|sp|B3EUJ7|RS4_AMOA5 RecName: Full=30S ribosomal protein S4 gi|189497069|gb|ACE05616.1| RNA-binding S4 domain protein [Candidatus Amoebophilus asiaticus 5a2] Length = 200 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI RR E ++G K + ++Y PG HG+ RK K Y +QL K K K Sbjct: 1 MARYIGPKAKISRRFNEPIFGPSK-ALQKKNYPPGQHGKIRKKKSEY-AIQLMEKGKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++F +A + +G T L+ +LE+RLD +VYR PT +ARQ V+H+H Sbjct: 59 IYG-LLEKQFANLFYKAAKKKGVTGELLLQYLETRLDNVVYRLGITPTRRSARQLVSHKH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SY K GD+I + +K+K ++ E + ++ + M+ + Sbjct: 118 ITVNGKIVNIPSYALKVGDIIGLTEKTKSSNAITERISSHSHNKNNWLEWDSKQMIGKVM 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + P + +VE YS+ Sbjct: 178 SLPHREE---IPEKINEQSIVELYSK 200 >gi|255970731|ref|ZP_05421317.1| 30S ribosomal protein S4 [Enterococcus faecalis T1] gi|255974305|ref|ZP_05424891.1| 30S ribosomal protein S4 [Enterococcus faecalis T2] gi|256761099|ref|ZP_05501679.1| 30S ribosomal protein S4 [Enterococcus faecalis T3] gi|255961749|gb|EET94225.1| 30S ribosomal protein S4 [Enterococcus faecalis T1] gi|255967177|gb|EET97799.1| 30S ribosomal protein S4 [Enterococcus faecalis T2] gi|256682350|gb|EEU22045.1| 30S ribosomal protein S4 [Enterococcus faecalis T3] Length = 208 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + K S +G+QL KQK++ Sbjct: 6 MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYKPGQHGPNSRGKVSEYGMQLTEKQKLRH 64 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 65 MYG-MNERQFRTLFIKASKIKEGKHGVNFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 123 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI V++KS+ ++++ EA + A P ++S + + + +F Sbjct: 124 HITVDGKRVDIPSYHVEVGQVIGVREKSQNISTIKEAVE-ATVGRPAFVSFDTEKLEGSF 182 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + P + LVVE+Y Sbjct: 183 TRLPERDELYP---EIDEALVVEYY 204 >gi|51245003|ref|YP_064887.1| 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54] gi|61215518|sp|Q6AP44|RS4_DESPS RecName: Full=30S ribosomal protein S4 gi|50876040|emb|CAG35880.1| probable 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54] Length = 210 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + K R++ PG HGQ R K S + +QLR Sbjct: 1 MARNIGAVCRRCRRENLKLFLKGDRCYSDKCSFERRAFAPGQHGQARFKKVSDYAVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K YG + E +FR F++A+ +G NL+ LE RLD V+RA F + ARQ Sbjct: 61 KQKVKSMYGVL-EAQFRLTFEKAEAQKGVAGENLLILLERRLDNAVFRAGFASSRTQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H+H+L+NG+ V+I SY+ EGDVI +++KS+ A V++ + R VP ++ ++ D Sbjct: 120 IVRHKHILINGKRVDIPSYQVSEGDVISLREKSRANAGVVDNLEAVVRRGVPTWLELDKD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N A+ +P+ + + +Q L+VE YS+ Sbjct: 180 NFKASVKALPNREE---ITMPIQERLIVELYSK 209 >gi|229552047|ref|ZP_04440772.1| ribosomal protein S4 [Lactobacillus rhamnosus LMS2-1] gi|229314624|gb|EEN80597.1| ribosomal protein S4 [Lactobacillus rhamnosus LMS2-1] Length = 239 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G +L G K + R Y PG HG + K S +G QLR KQK++ Sbjct: 37 MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 95 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F A + + T N + LE+RLD +V+R + ARQ VNH Sbjct: 96 MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 154 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ ++I SY + G VI ++++S+ LA V EA + P Y++ + + + Sbjct: 155 HITVDGKRLDIPSYEVQPGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 213 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + P + +LVVE+Y Sbjct: 214 VRLPERGELEP---EVDESLVVEYY 235 >gi|323466846|gb|ADX70533.1| 30S ribosomal protein S4 [Lactobacillus helveticus H10] Length = 203 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R + N + LE RLD+IVYR T ARQ V+H Sbjct: 60 MYG-LNERQFRTLFTRAGKIREGEHGTNFMILLERRLDSIVYRLGLATTREQARQLVSHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G I +K+KSK L V +A A P ++S + + M T Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201 >gi|58337098|ref|YP_193683.1| 30S ribosomal protein S4 [Lactobacillus acidophilus NCFM] gi|75507617|sp|Q5FKX2|RS4_LACAC RecName: Full=30S ribosomal protein S4 gi|58254415|gb|AAV42652.1| 30s ribosomal protein S4 [Lactobacillus acidophilus NCFM] Length = 203 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD+IVYR T ARQ VNH Sbjct: 60 MYG-LNERQFRTLFIRAGKIREGQHGINFMILLERRLDSIVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G I +K KSK L + +A + A P ++S + + M T Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKDKSKNLQQIRDALE-ATTARPSFVSFDENKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201 >gi|166365984|ref|YP_001658257.1| 30S ribosomal protein S4 [Microcystis aeruginosa NIES-843] gi|189045386|sp|B0JLP1|RS4_MICAN RecName: Full=30S ribosomal protein S4 gi|166088357|dbj|BAG03065.1| 30S ribosomal protein S4 [Microcystis aeruginosa NIES-843] Length = 202 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+ R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLTRKNA--RRAYAPGQHGQARKKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ ++A R+ G T L+ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VSEKQLIRYVRKARRATGSTGQVLLQLLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR V+I SY+C+ GDVI V+ + + V + ++P ++ + + +V Sbjct: 117 VTVNGRVVDIASYQCRPGDVIGVRNQERSQDLVKRNMEYPGLANLPSHLEFDKNTLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVVER---EWIALSINELLVVEYYSR 200 >gi|159901450|ref|YP_001547697.1| 30S ribosomal protein S4 [Herpetosiphon aurantiacus ATCC 23779] gi|226699075|sp|A9B436|RS4_HERA2 RecName: Full=30S ribosomal protein S4 gi|159894489|gb|ABX07569.1| ribosomal protein S4 [Herpetosiphon aurantiacus ATCC 23779] Length = 211 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 13/215 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP----KSPVNTR-SYGPGLHGQR-RKSKPSYFGLQLRA 54 M++ K+ RR G +L + + + R S PG HG R+ + S +G+QLR Sbjct: 1 MARYTGPVCKLSRREGVDLMLKSGNSGRKVLERRGSQPPGQHGASVRRRQLSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++FR + A R+ G T L+ LE RLD +V+R + T ARQ Sbjct: 61 KQKVRRIYGVL-ERQFRRYYGIATRTTGQTGAVLLQILERRLDNVVFRLGYAVTRAQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV---PEYISVN 171 VNH H+ VNGR +I S + GDVI V+ +S++ + + + + P ++S++ Sbjct: 120 LVNHGHITVNGRKTDIPSALVEVGDVIGVRAESRKRDYFKDLEETKQLNRVSPPSWLSLD 179 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M PS + + + L+VEFYSR Sbjct: 180 AGKMEGVVQTFPSREE---LDMSINEQLIVEFYSR 211 >gi|15672266|ref|NP_266440.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. lactis Il1403] gi|281490826|ref|YP_003352806.1| 50S ribosomal protein S4P [Lactococcus lactis subsp. lactis KF147] gi|26399484|sp|Q9CIS2|RS4_LACLA RecName: Full=30S ribosomal protein S4 gi|12723147|gb|AAK04382.1|AE006266_1 30S ribosomal protein S4 [Lactococcus lactis subsp. lactis Il1403] gi|281374584|gb|ADA64104.1| SSU ribosomal protein S4P [Lactococcus lactis subsp. lactis KF147] gi|326405863|gb|ADZ62934.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. lactis CV56] Length = 203 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRYGISLSGSGKE-IARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++FR+++ A + + T N ++ LE RLD +V+R T ARQFVNH Sbjct: 60 SYG-LSERQFRNLYIAATKVKEGTVGFNFMTLLEQRLDNVVFRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I S+R + G VI V++KS ++ ++LEA + A + ++S + D + T Sbjct: 119 HILVDGKRVDIPSFRVQPGQVISVREKSMKVPAILEAVE-ATKGRANFVSFDADKLEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + L+VEFY++ Sbjct: 178 VRLPERDE---INPEINEALIVEFYNK 201 >gi|303240945|ref|ZP_07327456.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2] gi|302591531|gb|EFL61268.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2] Length = 208 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR GE L+ + K V+ R Y PG HGQ RK Y G+QLR Sbjct: 1 MARYTDASCRLCRREGEKLFLKGERCYTNKCSVSRRGYAPGQHGQGRKKLSEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++YYG + E +FR F+ A +G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKARRYYGVL-EGQFRKYFEMAVSKKGVTGDNLLQLLELRLDNVVYRLGLATSRPEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H VNG+ VNI SY K GD I V +KSK + + + + + VP+++ ++ + Sbjct: 119 LVRHGHFTVNGKKVNIPSYLTKLGDAIAVVEKSKSSPKIKAIADITSGKAVPKWLELDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ + V +PS +DV P+ NL+VE YS+ Sbjct: 179 NLTSKIVALPSR-EDVDLPLK--ENLIVELYSK 208 >gi|29377528|ref|NP_816682.1| 30S ribosomal protein S4 [Enterococcus faecalis V583] gi|227517321|ref|ZP_03947370.1| 30S ribosomal protein S4 [Enterococcus faecalis TX0104] gi|227554493|ref|ZP_03984540.1| 30S ribosomal protein S4 [Enterococcus faecalis HH22] gi|229547500|ref|ZP_04436225.1| 30S ribosomal protein S4 [Enterococcus faecalis TX1322] gi|229548076|ref|ZP_04436801.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 29200] gi|256618170|ref|ZP_05475016.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 4200] gi|256854748|ref|ZP_05560112.1| ribosomal protein S4 [Enterococcus faecalis T8] gi|256958352|ref|ZP_05562523.1| 30S ribosomal protein S4 [Enterococcus faecalis DS5] gi|256960421|ref|ZP_05564592.1| 30S ribosomal protein S4 [Enterococcus faecalis Merz96] gi|256962912|ref|ZP_05567083.1| 30S ribosomal protein S4 [Enterococcus faecalis HIP11704] gi|257078338|ref|ZP_05572699.1| 30S ribosomal protein S4 [Enterococcus faecalis JH1] gi|257080522|ref|ZP_05574883.1| 30S ribosomal protein S4 [Enterococcus faecalis E1Sol] gi|257083258|ref|ZP_05577619.1| 30S ribosomal protein S4 [Enterococcus faecalis Fly1] gi|257088187|ref|ZP_05582548.1| 30S ribosomal protein S4 [Enterococcus faecalis D6] gi|257091313|ref|ZP_05585674.1| 30S ribosomal protein S4 [Enterococcus faecalis CH188] gi|257417921|ref|ZP_05594915.1| 30S ribosomal protein S4 [Enterococcus faecalis T11] gi|257420473|ref|ZP_05597463.1| 30S ribosomal protein S4 [Enterococcus faecalis X98] gi|293383922|ref|ZP_06629824.1| ribosomal protein S4 [Enterococcus faecalis R712] gi|293388316|ref|ZP_06632830.1| ribosomal protein S4 [Enterococcus faecalis S613] gi|294780202|ref|ZP_06745574.1| ribosomal protein S4 [Enterococcus faecalis PC1.1] gi|300861437|ref|ZP_07107521.1| ribosomal protein S4 [Enterococcus faecalis TUSoD Ef11] gi|307270423|ref|ZP_07551724.1| ribosomal protein S4 [Enterococcus faecalis TX4248] gi|307273936|ref|ZP_07555148.1| ribosomal protein S4 [Enterococcus faecalis TX0855] gi|307276703|ref|ZP_07557820.1| ribosomal protein S4 [Enterococcus faecalis TX2134] gi|307278207|ref|ZP_07559289.1| ribosomal protein S4 [Enterococcus faecalis TX0860] gi|307286409|ref|ZP_07566515.1| ribosomal protein S4 [Enterococcus faecalis TX0109] gi|307292091|ref|ZP_07571958.1| ribosomal protein S4 [Enterococcus faecalis TX0411] gi|312901910|ref|ZP_07761173.1| ribosomal protein S4 [Enterococcus faecalis TX0470] gi|312905372|ref|ZP_07764487.1| ribosomal protein S4 [Enterococcus faecalis TX0635] gi|312906737|ref|ZP_07765737.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 512] gi|312910725|ref|ZP_07769564.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 516] gi|312953171|ref|ZP_07772018.1| ribosomal protein S4 [Enterococcus faecalis TX0102] gi|41017833|sp|Q82ZI6|RS4_ENTFA RecName: Full=30S ribosomal protein S4 gi|29344995|gb|AAO82752.1| ribosomal protein S4 [Enterococcus faecalis V583] gi|227075191|gb|EEI13154.1| 30S ribosomal protein S4 [Enterococcus faecalis TX0104] gi|227176403|gb|EEI57375.1| 30S ribosomal protein S4 [Enterococcus faecalis HH22] gi|229306762|gb|EEN72758.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 29200] gi|229307342|gb|EEN73329.1| 30S ribosomal protein S4 [Enterococcus faecalis TX1322] gi|256597697|gb|EEU16873.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 4200] gi|256710308|gb|EEU25352.1| ribosomal protein S4 [Enterococcus faecalis T8] gi|256948848|gb|EEU65480.1| 30S ribosomal protein S4 [Enterococcus faecalis DS5] gi|256950917|gb|EEU67549.1| 30S ribosomal protein S4 [Enterococcus faecalis Merz96] gi|256953408|gb|EEU70040.1| 30S ribosomal protein S4 [Enterococcus faecalis HIP11704] gi|256986368|gb|EEU73670.1| 30S ribosomal protein S4 [Enterococcus faecalis JH1] gi|256988552|gb|EEU75854.1| 30S ribosomal protein S4 [Enterococcus faecalis E1Sol] gi|256991288|gb|EEU78590.1| 30S ribosomal protein S4 [Enterococcus faecalis Fly1] gi|256996217|gb|EEU83519.1| 30S ribosomal protein S4 [Enterococcus faecalis D6] gi|257000125|gb|EEU86645.1| 30S ribosomal protein S4 [Enterococcus faecalis CH188] gi|257159749|gb|EEU89709.1| 30S ribosomal protein S4 [Enterococcus faecalis T11] gi|257162297|gb|EEU92257.1| 30S ribosomal protein S4 [Enterococcus faecalis X98] gi|291078749|gb|EFE16113.1| ribosomal protein S4 [Enterococcus faecalis R712] gi|291082326|gb|EFE19289.1| ribosomal protein S4 [Enterococcus faecalis S613] gi|294452745|gb|EFG21175.1| ribosomal protein S4 [Enterococcus faecalis PC1.1] gi|295114399|emb|CBL33036.1| SSU ribosomal protein S4P [Enterococcus sp. 7L76] gi|300848898|gb|EFK76651.1| ribosomal protein S4 [Enterococcus faecalis TUSoD Ef11] gi|306496873|gb|EFM66423.1| ribosomal protein S4 [Enterococcus faecalis TX0411] gi|306502422|gb|EFM71695.1| ribosomal protein S4 [Enterococcus faecalis TX0109] gi|306505196|gb|EFM74384.1| ribosomal protein S4 [Enterococcus faecalis TX0860] gi|306506602|gb|EFM75755.1| ribosomal protein S4 [Enterococcus faecalis TX2134] gi|306509415|gb|EFM78473.1| ribosomal protein S4 [Enterococcus faecalis TX0855] gi|306513201|gb|EFM81832.1| ribosomal protein S4 [Enterococcus faecalis TX4248] gi|310627385|gb|EFQ10668.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 512] gi|310628914|gb|EFQ12197.1| ribosomal protein S4 [Enterococcus faecalis TX0102] gi|310631396|gb|EFQ14679.1| ribosomal protein S4 [Enterococcus faecalis TX0635] gi|311288988|gb|EFQ67544.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 516] gi|311290977|gb|EFQ69533.1| ribosomal protein S4 [Enterococcus faecalis TX0470] gi|315027687|gb|EFT39619.1| ribosomal protein S4 [Enterococcus faecalis TX2137] gi|315028229|gb|EFT40161.1| ribosomal protein S4 [Enterococcus faecalis TX4000] gi|315031243|gb|EFT43175.1| ribosomal protein S4 [Enterococcus faecalis TX0017] gi|315036538|gb|EFT48470.1| ribosomal protein S4 [Enterococcus faecalis TX0027] gi|315143294|gb|EFT87310.1| ribosomal protein S4 [Enterococcus faecalis TX2141] gi|315148889|gb|EFT92905.1| ribosomal protein S4 [Enterococcus faecalis TX4244] gi|315149065|gb|EFT93081.1| ribosomal protein S4 [Enterococcus faecalis TX0012] gi|315152920|gb|EFT96936.1| ribosomal protein S4 [Enterococcus faecalis TX0031] gi|315154776|gb|EFT98792.1| ribosomal protein S4 [Enterococcus faecalis TX0043] gi|315157493|gb|EFU01510.1| ribosomal protein S4 [Enterococcus faecalis TX0312] gi|315162550|gb|EFU06567.1| ribosomal protein S4 [Enterococcus faecalis TX0645] gi|315164504|gb|EFU08521.1| ribosomal protein S4 [Enterococcus faecalis TX1302] gi|315167181|gb|EFU11198.1| ribosomal protein S4 [Enterococcus faecalis TX1341] gi|315171025|gb|EFU15042.1| ribosomal protein S4 [Enterococcus faecalis TX1342] gi|315173453|gb|EFU17470.1| ribosomal protein S4 [Enterococcus faecalis TX1346] gi|315573361|gb|EFU85552.1| ribosomal protein S4 [Enterococcus faecalis TX0309B] gi|315578558|gb|EFU90749.1| ribosomal protein S4 [Enterococcus faecalis TX0630] gi|315581207|gb|EFU93398.1| ribosomal protein S4 [Enterococcus faecalis TX0309A] gi|323479004|gb|ADX78443.1| ribosomal protein S4 [Enterococcus faecalis 62] gi|327536193|gb|AEA95027.1| 30S ribosomal protein S4 [Enterococcus faecalis OG1RF] gi|329571122|gb|EGG52828.1| ribosomal protein S4 [Enterococcus faecalis TX1467] Length = 203 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + K S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYKPGQHGPNSRGKVSEYGMQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFRTLFIKASKIKEGKHGVNFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI V++KS+ ++++ EA + A P ++S + + + +F Sbjct: 119 HITVDGKRVDIPSYHVEVGQVIGVREKSQNISTIKEAVE-ATVGRPAFVSFDTEKLEGSF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + P + LVVE+Y Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199 >gi|318040406|ref|ZP_07972362.1| 30S ribosomal protein S4 [Synechococcus sp. CB0101] Length = 202 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KS RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKSA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR V+I SY+CK GDV+ ++++ + + ++P ++ ++ + + A Sbjct: 117 VTVNGRVVDIPSYQCKAGDVVAIRERKQSKKLAEGNLEFPGLANIPPHLELDKNKLTAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVEFYSR Sbjct: 177 IS---KCEREWVALEINELLVVEFYSR 200 >gi|270157887|ref|ZP_06186544.1| ribosomal protein S4 [Legionella longbeachae D-4968] gi|289163854|ref|YP_003453992.1| 30S ribosomal subunit protein S4 [Legionella longbeachae NSW150] gi|269989912|gb|EEZ96166.1| ribosomal protein S4 [Legionella longbeachae D-4968] gi|288857027|emb|CBJ10841.1| 30S ribosomal subunit protein S4 [Legionella longbeachae NSW150] Length = 206 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + PG HG +K + + +GLQLR KQ Sbjct: 1 MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHG-DKKPRLNNYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K++++YG + EK+FR +K A R +G T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KIRRFYGVL-EKQFRGYYKMAARMKGATGENLMTLLERRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 H+ +LVN + VN+ SY K GDVI V+Q++K + A L+E+ VP ++++V+ + Sbjct: 119 THKAILVNDKIVNVPSYLIKPGDVISVRQRAKNQGRIQAALALSEQRVPCDWLTVDTSSF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P+ NLVVE YS+ Sbjct: 179 KGTFSTAPT---LTDLSSDYNVNLVVELYSK 206 >gi|315038024|ref|YP_004031592.1| 30S ribosomal protein S4 [Lactobacillus amylovorus GRL 1112] gi|325956476|ref|YP_004291888.1| 30S ribosomal protein S4 [Lactobacillus acidophilus 30SC] gi|312276157|gb|ADQ58797.1| 30S ribosomal protein S4 [Lactobacillus amylovorus GRL 1112] gi|325333041|gb|ADZ06949.1| 30S ribosomal protein S4 [Lactobacillus acidophilus 30SC] gi|327183304|gb|AEA31751.1| 30S ribosomal protein S4 [Lactobacillus amylovorus GRL 1118] Length = 203 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD IVYR T ARQ VNH Sbjct: 60 MYG-LNERQFRTLFARAGKIREGQHGVNFMILLERRLDNIVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G I +K+KSK L V +A A P ++S + + M + Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDESLVVEYYNK 201 >gi|237734477|ref|ZP_04564958.1| 30S ribosomal protein S4 [Mollicutes bacterium D7] gi|229382297|gb|EEO32388.1| 30S ribosomal protein S4 [Coprobacillus sp. D7] Length = 201 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+G + K +N R+Y PG HGQ+RK + Y GLQL KQK++ Sbjct: 1 MSRYTGPQWKLSRRLGFSTLENGKE-LNKRAYAPGQHGQKRKKQTEY-GLQLAEKQKVRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+F + FK+A + G +N LE RLD +VYR F PT AARQ VNH H Sbjct: 59 MYG-VNEKQFHNTFKQAGKMEGIHGYNFFCLLERRLDNVVYRLGFAPTRRAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 LVNG +I S+R K GDVIEVK+KSK LA + + + A P ++ V+ + Sbjct: 118 FLVNGIKTDIPSFRVKVGDVIEVKEKSKNLAIIKASLE-ARVHTPAFVEVDDTKLTGKLA 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +L+VE+Y+R Sbjct: 177 RLPERSE---LNQEINESLIVEYYNR 199 >gi|161507287|ref|YP_001577241.1| 30S ribosomal protein S4 [Lactobacillus helveticus DPC 4571] gi|172048222|sp|A8YUL2|RS4_LACH4 RecName: Full=30S ribosomal protein S4 gi|160348276|gb|ABX26950.1| 30S ribosomal protein S4 [Lactobacillus helveticus DPC 4571] gi|328468696|gb|EGF39681.1| 30S ribosomal protein S4 [Lactobacillus helveticus MTCC 5463] Length = 203 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R + N + LE RLD+IVYR T ARQ VNH Sbjct: 60 MYG-LNERQFRTLFTRAGKIREGEHGTNFMILLERRLDSIVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G I +K+KSK L V +A A P ++S + + M T Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201 >gi|154174170|ref|YP_001409132.1| 30S ribosomal protein S4 [Campylobacter curvus 525.92] gi|171769259|sp|A7H0Z0|RS4_CAMC5 RecName: Full=30S ribosomal protein S4 gi|112802255|gb|EAT99599.1| ribosomal protein S4 [Campylobacter curvus 525.92] Length = 208 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR+G +L + KS ++ R Y PG HGQRR Y GLQLR Sbjct: 1 MARYTGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQRRAKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FR +F+EA R G+T L+ LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-ISEKQFRRLFQEAARREGNTGALLVQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I SYR + G +EV +KSK ++ A L A+ + ++ V D Sbjct: 119 LVTHGHILVNGKRVDIPSYRVEPGSKVEVIEKSKNNPQIVRAIDLTAQTGIVGWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + + + ++ +VE YS+ Sbjct: 179 KKFGIFTRNPEREEVI---IPIEERFIVELYSK 208 >gi|167756759|ref|ZP_02428886.1| hypothetical protein CLORAM_02306 [Clostridium ramosum DSM 1402] gi|167702934|gb|EDS17513.1| hypothetical protein CLORAM_02306 [Clostridium ramosum DSM 1402] Length = 216 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+G + K +N R+Y PG HGQ+RK + Y GLQL KQK++ Sbjct: 16 MSRYTGPQWKLSRRLGFSTLENGKE-LNKRAYAPGQHGQKRKKQTEY-GLQLAEKQKVRH 73 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+F + FK+A + G +N LE RLD +VYR F PT AARQ VNH H Sbjct: 74 MYG-VNEKQFHNTFKQAGKMEGIHGYNFFCLLERRLDNVVYRLGFAPTRRAARQLVNHGH 132 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 LVNG +I S+R K GDVIEVK+KSK LA + + + A P ++ V+ + Sbjct: 133 FLVNGIKTDIPSFRVKVGDVIEVKEKSKNLAIIKASLE-ARVHTPAFVEVDDTKLTGKLA 191 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +L+VE+Y+R Sbjct: 192 RLPERSE---LNQEINESLIVEYYNR 214 >gi|78212331|ref|YP_381110.1| 30S ribosomal protein S4 [Synechococcus sp. CC9605] gi|123578565|sp|Q3ALH7|RS4_SYNSC RecName: Full=30S ribosomal protein S4 gi|78196790|gb|ABB34555.1| ribosomal protein S4 [Synechococcus sp. CC9605] Length = 202 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++++ + +VP ++ ++ + A Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKKLAEANLEFPGLANVPSHLELDKSKLSAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 TA---RCEREWVALEINELLVVEYYSR 200 >gi|227903670|ref|ZP_04021475.1| 30S ribosomal protein S4 [Lactobacillus acidophilus ATCC 4796] gi|227868557|gb|EEJ75978.1| 30S ribosomal protein S4 [Lactobacillus acidophilus ATCC 4796] Length = 235 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 33 MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 91 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD+IVYR T ARQ VNH Sbjct: 92 MYG-LNERQFRTLFIRAGKIREGQHGINFMILLERRLDSIVYRLGLATTREQARQLVNHG 150 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G I +K KSK L + +A + A P ++S + + M T Sbjct: 151 HITVDGKRVDIPSYEVSVGQTIGLKDKSKNLQQIRDALE-ATTARPSFVSFDENKMEGTL 209 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 210 VRLPERDEMEP---EIDESLVVEWYNK 233 >gi|297205789|ref|ZP_06923184.1| 30S ribosomal protein S4 [Lactobacillus jensenii JV-V16] gi|297148915|gb|EFH29213.1| 30S ribosomal protein S4 [Lactobacillus jensenii JV-V16] Length = 235 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G+QL KQK++ Sbjct: 33 MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGEHGPNNRGRLSEYGMQLHEKQKLRW 91 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++FR++F A + R + N + LE RLD IVYR T ARQ VNH Sbjct: 92 MFG-LNERQFRNLFNRAGKIRQGEHGTNFMVLLERRLDNIVYRLGLATTREQARQLVNHG 150 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY K G I +K+KSK L V +A + A P ++S + + + + Sbjct: 151 HILVDGKRVDIPSYEVKVGQEISLKEKSKNLQQVKDALE-AVVSRPSFVSFDENKLTGSL 209 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + LVVE+Y++ Sbjct: 210 VRLPERDEMEP---EINEALVVEYYNK 233 >gi|56480311|ref|NP_709084.2| 30S ribosomal protein S4 [Shigella flexneri 2a str. 301] gi|56383862|gb|AAN44791.2| 30S ribosomal subunit protein S4 [Shigella flexneri 2a str. 301] Length = 202 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 ++V GR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M TF Sbjct: 119 IMVPGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + +L+VE YS+ Sbjct: 179 KRKPERSD---LSADINEHLIVELYSK 202 >gi|326332226|ref|ZP_08198506.1| ribosomal protein S4 [Nocardioidaceae bacterium Broad-1] gi|325949932|gb|EGD41992.1| ribosomal protein S4 [Nocardioidaceae bacterium Broad-1] Length = 202 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G + R Y PG HG+ R + Y LQLR KQK + Sbjct: 1 MARYTGPMTRKSRRLGVDLVGND-AAFEKRPYPPGQHGRGRIKESEYL-LQLREKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F S + EA R G T NL+ LE RLD +VYRA F T ARQ V H H Sbjct: 59 TYG-VMEKQFASYYAEAHRRDGKTGDNLLQLLEGRLDNVVYRAGFARTRRQARQLVVHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 LVNG+ VN+ S++ DVI+V++KS ++ + A + ER VP ++ M Sbjct: 118 FLVNGKKVNVPSFQVSAHDVIDVREKSLEMTPFIVARETHGERVVPAWLEAVPSRMRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE+YS+ Sbjct: 178 HQLPVRAQ---IDVPVQEQLIVEYYSK 201 >gi|32266901|ref|NP_860933.1| 30S ribosomal protein S4 [Helicobacter hepaticus ATCC 51449] gi|41017829|sp|Q7VGC0|RS4_HELHP RecName: Full=30S ribosomal protein S4 gi|32262953|gb|AAP77999.1| ribosomal protein S4 [Helicobacter hepaticus ATCC 51449] Length = 208 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + K ++ R YGPG HGQ+R Y GLQLR Sbjct: 1 MARYRGPVEKLERRFGISLALKGERRLAGKCALDKRPYGPGQHGQKRGKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR++FKEA+R G+T NL+ +E RLD +VYR F T ARQ Sbjct: 60 KQKAKIMYG-VSEKQFRALFKEANRQEGNTGENLVRIIEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I SY K G IEVK+KSK V+ A L ++ + ++ V+ + Sbjct: 119 LVTHGHILVNGKRVDIPSYMVKPGQKIEVKEKSKNNPQVIRAIDLTSQTGIVPWVDVDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ L+VE YS+ Sbjct: 179 KKFGIFTRFPQREEVV---IPIEERLIVELYSK 208 >gi|282901762|ref|ZP_06309677.1| Ribosomal protein S4 [Cylindrospermopsis raciborskii CS-505] gi|281193379|gb|EFA68361.1| Ribosomal protein S4 [Cylindrospermopsis raciborskii CS-505] Length = 202 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE KS R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGELPGLTRKSA--RRAYAPGQHGQNRKKRSEY-AIRLEEKQKLRL 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ ++A R G T L+ LE RLD V+R PTI AARQ V+H H Sbjct: 58 NYG-LTEKQMLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTISAARQLVSHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V +NGR VNI SY+C+ G+ I VK K V Q ++P ++ + + + Sbjct: 117 VTINGRVVNIASYQCRPGEEIGVKDKEASRKLVENNLQYPGLANLPNHLEFDKNKLAGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIER---EWVALQVNELLVVEYYSR 200 >gi|268680562|ref|YP_003304993.1| ribosomal protein S4 [Sulfurospirillum deleyianum DSM 6946] gi|268618593|gb|ACZ12958.1| ribosomal protein S4 [Sulfurospirillum deleyianum DSM 6946] Length = 208 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR+G +L + KS ++ R Y PG HGQRR Y GLQLR Sbjct: 1 MARYRGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQRRTKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR IF EA R G+T NL+ +E RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRIFDEAARREGNTGINLVLLIERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173 V H H+LVNG V+I SY + GD +EV +KSK + A +L ++ + ++ V + Sbjct: 119 LVTHGHILVNGNKVDIPSYIVRAGDKVEVCEKSKNNPQIKRALELTQQTGIAPWVDVERE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F RIP + V + ++ L+VE YS+ Sbjct: 179 KAMGIFTRIPEREEVV---IPVEERLIVELYSK 208 >gi|327444033|gb|EGE90687.1| ribosomal protein S4 [Propionibacterium acnes HL043PA1] gi|327449433|gb|EGE96087.1| ribosomal protein S4 [Propionibacterium acnes HL043PA2] Length = 201 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G KS R Y PG+HG+ R Y LQLR KQK + Sbjct: 1 MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EADR++G T L+ LESRLD +VY A T ARQ V+H H Sbjct: 59 AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYLAGLAATRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR D+I+V++KSK L ++ A + E RDVP ++ V + Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + V + + +VE YS+ Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201 >gi|27904918|ref|NP_778044.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29611835|sp|P59491|RS4_BUCBP RecName: Full=30S ribosomal protein S4 gi|27904316|gb|AAO27149.1| ribosomal protein S4 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 206 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR +L+ + ++++ PG HG +R + S +G+QLR KQ Sbjct: 1 MAKYLGPKLKLCRRENTDLFFKSGIRAIDSKCKFDQFPGQHGSKR-QRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E +FR+ +K A R +G+T NL+ LE+RLD + YR F T ARQ V Sbjct: 60 KVRRLYG-ILEAQFRNYYKHASRLKGNTGENLLFLLENRLDNVTYRIGFGSTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +LVN +VNI SY+ GDVI + + SK + + A +L+E R+ P +I V+ + M Sbjct: 119 SHKSILVNNCTVNIPSYQVSPGDVISIHKNSKLQSRIKAALELSEQRETPIWIEVDFNKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R+P + L++E YS+ Sbjct: 179 QGIYKRVPERSD---LSAEINEYLIIELYSK 206 >gi|302036692|ref|YP_003797014.1| 30S ribosomal protein S4 [Candidatus Nitrospira defluvii] gi|300604756|emb|CBK41088.1| 30S ribosomal protein S4 [Candidatus Nitrospira defluvii] Length = 208 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K ++ RR GE L+ + K + RSY PG HGQ R + S + LQLR Sbjct: 1 MAKYSGPVCRLCRREGEKLFLKGSRCMTEKCAIERRSYPPGQHGQAR-QRTSDYSLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR IF+ A+R G T L+ LE RLD +VYR F + ARQ Sbjct: 60 KQKLKRIYG-LQECQFRGIFERAERQAGVTGDTLLRLLECRLDNVVYRLGFGASRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 VNH H+++NGR V K GD +EV+QKS++L + A + R +PE++ ++ Sbjct: 119 LVNHGHMMINGRKVKAPGALVKAGDSVEVRQKSRELLPIQGALAAVDGRGIPEWLELDRT 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P+ + + PV +VVE YSR Sbjct: 179 ACKGTIRSLPTK-EHIVLPV--NEQMVVELYSR 208 >gi|184153141|ref|YP_001841482.1| 30S ribosomal protein S4 [Lactobacillus reuteri JCM 1112] gi|226699080|sp|B2G6C0|RS4_LACRJ RecName: Full=30S ribosomal protein S4 gi|183224485|dbj|BAG25002.1| 30S ribosomal protein S4 [Lactobacillus reuteri JCM 1112] Length = 201 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ RR+G +L G K + R+Y PG HG+ R+ K S +G QLR KQK++ Sbjct: 1 MSRYTGPSWRVSRRLGVSLSGTVKE-LARRAYAPGDHGRDRRGKLSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + + T N ++ LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MTERQFSNLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G +I V+ KSK L + A + A P Y+ + D + Sbjct: 119 HITVDGKRVDIPSYEVKVGQIIAVRDKSKNLDIIKNAVE-AVVSRPSYVDFDADKLEGKL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ + L+VEFY++ Sbjct: 178 NRIPAR---EDMNADIDEALIVEFYNK 201 >gi|168205206|ref|ZP_02631211.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987] gi|169347013|ref|ZP_02865955.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495] gi|169296696|gb|EDS78825.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495] gi|170663240|gb|EDT15923.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987] Length = 206 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K RSY PG HG RK +Y G QLR Sbjct: 1 MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR+ ++ A++ RG NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 VNH H LVNG+ V+I S++ DV+ V +KS+ ++ + +P+++ N +N Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDVVTVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P+ +D+ PV L+VE YS+ Sbjct: 178 FEGKVVAEPAR-EDIDVPV--NETLIVELYSK 206 >gi|18311359|ref|NP_563293.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13] gi|110801306|ref|YP_697066.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124] gi|168215204|ref|ZP_02640829.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969] gi|168216659|ref|ZP_02642284.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239] gi|182626935|ref|ZP_02954668.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721] gi|26399584|sp|Q8XHV0|RS4A_CLOPE RecName: Full=30S ribosomal protein S4 A gi|123049591|sp|Q0TMS4|RS4A_CLOP1 RecName: Full=30S ribosomal protein S4 A gi|18146043|dbj|BAB82083.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13] gi|110675953|gb|ABG84940.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124] gi|170713408|gb|EDT25590.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969] gi|177907725|gb|EDT70340.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721] gi|182381248|gb|EDT78727.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239] Length = 206 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K RSY PG HG RK +Y G QLR Sbjct: 1 MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR+ ++ A++ RG NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 VNH H LVNG+ V+I S++ DVI V +KS+ ++ + +P+++ N +N Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P+ +D+ PV L+VE YS+ Sbjct: 178 FEGKVVAEPAR-EDIDVPV--NETLIVELYSK 206 >gi|312877392|ref|ZP_07737357.1| ribosomal protein S4 [Caldicellulosiruptor lactoaceticus 6A] gi|311795866|gb|EFR12230.1| ribosomal protein S4 [Caldicellulosiruptor lactoaceticus 6A] Length = 208 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MSK ++ RR G L+ + K R Y PG HGQ RK Y G+QLR Sbjct: 1 MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL+S LE RLD +VYR F + AR Sbjct: 60 KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H VNGR+VNI SY K GD IEV ++SK +E + A++ P+++ + + Sbjct: 119 LVTHAHFKVNGRTVNIPSYLVKVGDEIEVDERSKSKTRFVEIKEKYAKKPSPKWLDKDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V + +P+ +D+ P ++ +L+VE YS+ Sbjct: 179 NLVGRVIALPTR-EDIDMP--IREHLIVELYSK 208 >gi|260102591|ref|ZP_05752828.1| 30S ribosomal protein S4 [Lactobacillus helveticus DSM 20075] gi|260083618|gb|EEW67738.1| 30S ribosomal protein S4 [Lactobacillus helveticus DSM 20075] Length = 203 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R + N + LE RLD+IVYR T ARQ VNH Sbjct: 60 MYG-LNERQFRTLFIRAGKIREGEHGTNFMILLERRLDSIVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G I +K+KSK L V +A A P ++S + + M T Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201 >gi|167771240|ref|ZP_02443293.1| hypothetical protein ANACOL_02598 [Anaerotruncus colihominis DSM 17241] gi|167666491|gb|EDS10621.1| hypothetical protein ANACOL_02598 [Anaerotruncus colihominis DSM 17241] Length = 206 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR + L+ + K V R+ PG HG+ R K S +G+QLRA Sbjct: 1 MARYTGAVCRLCRRENKKLFLKGERCYTDKCAVTRRATVPGQHGKARTRKASEYGVQLRA 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ+ ++YYG I E +F F+ A G T NL+ ESRLD +VYR F + ARQ Sbjct: 61 KQQARRYYG-ILESQFSKYFEMAAAKSGVTGENLLRICESRLDNVVYRLGFAASRKEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H VNG+ NI S K GDV+ V KS ++ V+EA R V ++ N N Sbjct: 120 LVRHGHFTVNGKKANIPSILLKAGDVVAVASKSDKIKGVVEA--FGSRPVARWLECNKTN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M + +P+ + ++ +L+VE YS+ Sbjct: 178 MTGRVIELPNR---EDIDLDVEEHLIVELYSK 206 >gi|260772120|ref|ZP_05881037.1| SSU ribosomal protein S4p (S9e) [Vibrio metschnikovii CIP 69.14] gi|260612987|gb|EEX38189.1| SSU ribosomal protein S4p (S9e) [Vibrio metschnikovii CIP 69.14] Length = 202 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 10/207 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 IYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNG VN+ S+ DV+ +++K+K+ + + A ++AE R+ P +I V+ M TF Sbjct: 119 ILVNGSVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDASQMEGTF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + L+VE YS+ Sbjct: 179 KRKPERSD---LSADINEQLIVELYSK 202 >gi|163847949|ref|YP_001635993.1| 30S ribosomal protein S4 [Chloroflexus aurantiacus J-10-fl] gi|222525829|ref|YP_002570300.1| 30S ribosomal protein S4 [Chloroflexus sp. Y-400-fl] gi|189045369|sp|A9WH92|RS4_CHLAA RecName: Full=30S ribosomal protein S4 gi|254764579|sp|B9LJF8|RS4_CHLSY RecName: Full=30S ribosomal protein S4 gi|163669238|gb|ABY35604.1| ribosomal protein S4 [Chloroflexus aurantiacus J-10-fl] gi|222449708|gb|ACM53974.1| ribosomal protein S4 [Chloroflexus sp. Y-400-fl] Length = 206 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K+ RR+G + + +N RS PG HG R+ + S +G+QLR KQK K Sbjct: 1 MARYIGPVGKVSRRLGIGITEKGLRILNKRSDPPGQHGAAARRRQLSDYGMQLREKQKAK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR +F++A R G T L+S LE RLD +VYR F T ARQ VNH Sbjct: 61 FLYGVL-ERQFRRLFEQASRRSGVTGEYLLSLLERRLDNVVYRLGFATTRAQARQLVNHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMV 176 H++V+GR NI SY K G VI V+ +S+ L + PE++ +N + Sbjct: 120 HIVVDGRKTNIPSYTVKVGQVIAVRPQSRSRTYFKNLVDSGVLNKHRAPEWLRLNAAELS 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T V +P + L+VEFYSR Sbjct: 180 GTVVALPRR---EDAEAGINEQLIVEFYSR 206 >gi|163783136|ref|ZP_02178130.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1] gi|159881470|gb|EDP74980.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1] Length = 211 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 6/211 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQ 56 M + K+DR+ G + G+ +P + R++ PG HG+ R+ K S +G++L KQ Sbjct: 1 MGRYIGPWVKLDRKFGVVVSGKKSAPRIMQRRNFPPGQHGRTKGRRRKLSEYGIRLMEKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K YG + EK+F+ F A +S+ +T+ L+ LE RLD +VYR F T ARQ V Sbjct: 61 KLKYLYGGLREKQFKRYFDLAAKSKENTADVLLQLLERRLDNVVYRLGFATTRRQARQLV 120 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H H+LVNGR V+I Y + GD+IEVK S+ + + E + + R VPE++ ++ DN Sbjct: 121 AHGHILVNGRKVDIPHYEVEPGDIIEVKSSSRDIPFLKENLENIDPRSVPEWLELDKDNF 180 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P + + + + ++EFYS+ Sbjct: 181 RGKVLKNPEGVAEY-LEIPINVQYIIEFYSK 210 >gi|11465685|ref|NP_053829.1| ribosomal protein S4 [Porphyra purpurea] gi|1710705|sp|P51219|RR4_PORPU RecName: Full=30S ribosomal protein S4, chloroplastic gi|1276685|gb|AAC08105.1| 30S ribosomal protein S4 [Porphyra purpurea] Length = 201 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G +L G + + R Y PG HGQ+ + KPS + ++L KQK++ Sbjct: 1 MSRYRGPRVRISRRLG-DLPGLSRKAI-KRPYPPGEHGQKPR-KPSEYAVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ K A + +G T L+ LE RLD ++R PTI AARQ VNH H Sbjct: 58 NYG-LSEKQLFKYVKAAKKLQGSTGQILLQLLEMRLDNTIFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + +NG+ V+I SY+CK G++I VK + V ++P ++ +N N+ Sbjct: 117 ICINGKVVSICSYQCKPGELITVKPQESSKQLVESYLAFPGLANIPSHLELNKSNLSGKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NGVIDR---EWVALQLNELLVVEYYSR 200 >gi|270291002|ref|ZP_06197225.1| 30S ribosomal protein S4 [Pediococcus acidilactici 7_4] gi|304385274|ref|ZP_07367619.1| 30S ribosomal protein S4 [Pediococcus acidilactici DSM 20284] gi|270280398|gb|EFA26233.1| 30S ribosomal protein S4 [Pediococcus acidilactici 7_4] gi|304328481|gb|EFL95702.1| 30S ribosomal protein S4 [Pediococcus acidilactici DSM 20284] Length = 202 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HGQ + K S +G+QLR KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYAPGDHGQNNRRKISEYGMQLREKQKLRM 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-LTERQFANLFDRASKMREGVPGTNFMILLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI V++KSK L + EA + A P+++ + D + + Sbjct: 119 HITVDGKRVDIPSYEVEIGQVIGVREKSKDLKIINEAVE-AVVGRPQFVQFDADKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + +L+VE+Y++ Sbjct: 178 VRLPERDE---LEAEIDDSLIVEYYNK 201 >gi|300811296|ref|ZP_07091793.1| ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497660|gb|EFK32685.1| ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 203 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + RSY PG HG + + S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYVPGQHGPNHRGRLSEYGMQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G +SE++FR++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MFG-LSERQFRTLFARAGKIREGQHGTNFMILLERRLDNVVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A + A P ++S + D M Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + P + LVVE+Y++ Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201 >gi|297625817|ref|YP_003687580.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921582|emb|CBL56136.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 201 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR G +L G K R Y PG+HG+ R Y LQL+ KQK + Sbjct: 1 MARYTGPMTKKSRRFGTDLVGNDK-AFERRPYAPGVHGRGRTKDSEY-SLQLKEKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++EA R G T L+ LESRLD +VYRA F T ARQ V+H H Sbjct: 59 AYGVL-EKQFHRYYEEASRRPGRTGDLLLQILESRLDNVVYRAGFASTRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI S+R D+I+V+ KS+++ + A + ERDVP +++V + M Sbjct: 118 ILVNGKKVNIPSFRVAPLDIIDVRAKSQEMTPFVIARETFGERDVPGWLTVKPNKMRVLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + V + + +VE YSR Sbjct: 178 HQLPTREQIV---LDVNEQEIVELYSR 201 >gi|257417204|ref|ZP_05594198.1| 30S ribosomal protein S4 [Enterococcus faecalis AR01/DG] gi|257159032|gb|EEU88992.1| 30S ribosomal protein S4 [Enterococcus faecalis ARO1/DG] Length = 203 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + K S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYKPGQHGPNSRGKVSEYGMQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFRTLFIKASKIKEGKHGVNFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI V++KS+ ++++ EA + + P ++S + + + +F Sbjct: 119 HITVDGKRVDIPSYHVEVGQVIGVREKSQNISTIKEAVE-STVGRPAFVSFDTEKLEGSF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + P + LVVE+Y Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199 >gi|154249790|ref|YP_001410615.1| 30S ribosomal protein S4 [Fervidobacterium nodosum Rt17-B1] gi|171769361|sp|A7HM25|RS4_FERNB RecName: Full=30S ribosomal protein S4 gi|154153726|gb|ABS60958.1| RNA-binding S4 domain protein [Fervidobacterium nodosum Rt17-B1] Length = 209 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + K P + R + PG HG+ +K Y LQLRA Sbjct: 1 MARNTGPLCKLCRREGMKLYLKGERCFSEKCPFDKRPFAPGQHGREKKKLTQY-ALQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ MK+ YG + EK+FR ++ A + GDT NL++ +E RLD +VYR F AARQ Sbjct: 60 KQTMKRIYGVL-EKQFRIYYERAVKQSGDTRENLVAQVERRLDNVVYRLGFAINRRAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V+H HVLVNG+ V+I SY+ + GDVI +K+ S+ + + +A +L + R + ++ V++D Sbjct: 119 LVSHGHVLVNGKKVDIPSYQVRPGDVISIKEGSRTIEPIKQAIELNKGRAISNWLEVDYD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VR P + + PV +VEFYSR Sbjct: 179 QFKGVYVRNPKLEEIIDLPV--NVQAIVEFYSR 209 >gi|300114712|ref|YP_003761287.1| 30S ribosomal protein S4 [Nitrosococcus watsonii C-113] gi|299540649|gb|ADJ28966.1| ribosomal protein S4 [Nitrosococcus watsonii C-113] Length = 208 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 127/212 (59%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQ-RRKSKPSYFGLQLRAK 55 M+K K K RR G +L+ + P++++ PG HG R+++ S + LQLR K Sbjct: 1 MAKYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGTRRARMSDYALQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++FR +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKLRRMYGVL-ERQFRRYYKEAARRKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDN 174 +NH+ +LVNG+ +NI SY+ + DV+ V++K+K+ + A +LA+ R E++ +N Sbjct: 120 INHKGILVNGQGINIPSYQVRAEDVVAVREKAKKQDRIKFALELAQARTEAEWMEINAGK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + P +Q NLVVE YS+ Sbjct: 180 LEGVFKRVPERSELAP---DIQENLVVELYSK 208 >gi|269837093|ref|YP_003319321.1| 30S ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745] gi|269786356|gb|ACZ38499.1| ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745] Length = 214 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 84/217 (38%), Positives = 122/217 (56%), Gaps = 14/217 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTR----SYGPGLHGQRRKSKPSYFGL 50 M++ +I RR G L+ + PK P+ R ++ PG HGQ+R +PS +GL Sbjct: 1 MARYTGPVCRICRREGMKLFLKGERCFGPKCPIVQRQPAKNFPPGQHGQKRTRRPSEYGL 60 Query: 51 QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 QLR KQK+++ YG I E++FR F+EA+R G T NL+ LE RLD +VYR F + Sbjct: 61 QLREKQKIRRMYG-IMERQFRRHFEEAERRGGVTGENLLQILEMRLDNVVYRLGFADSRN 119 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYIS 169 ARQ V H H VNGR NI S+ K GDV+ V+ +S++ ++ A + VPE+IS Sbjct: 120 QARQLVRHGHFTVNGRKTNIPSFIVKPGDVVAVRPQSREREYFKIVAETAGSKQVPEWIS 179 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +++ + P+ + P LVVEFYSR Sbjct: 180 RDMESLSGRIINAPTPDQIERPP--FNEQLVVEFYSR 214 >gi|116511114|ref|YP_808330.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris SK11] gi|125623168|ref|YP_001031651.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris MG1363] gi|122940375|sp|Q032G4|RS4_LACLS RecName: Full=30S ribosomal protein S4 gi|152060956|sp|A2RI10|RS4_LACLM RecName: Full=30S ribosomal protein S4 gi|116106768|gb|ABJ71908.1| SSU ribosomal protein S4P [Lactococcus lactis subsp. cremoris SK11] gi|124491976|emb|CAL96903.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris MG1363] gi|300069915|gb|ADJ59315.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris NZ9000] Length = 203 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQSRRYGISLTGSGKE-IARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++FR+++ A + + T +N ++ LE RLD +VYR T ARQFVNH Sbjct: 60 TYG-LSERQFRNLYVAATKVKEGTVGYNFMTLLEQRLDNVVYRLGLATTRRQARQFVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I S+R + G VI V++KS ++ ++LEA + A + ++S + D + T Sbjct: 119 HILVDGKRVDIPSFRVQPGQVISVREKSMKVPAILEAVE-ATKGRANFVSFDADKLEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + L+VEFY++ Sbjct: 178 VRLPERDE---INPEINDALIVEFYNK 201 >gi|254495736|ref|ZP_05108651.1| 30S ribosomal protein S4 [Legionella drancourtii LLAP12] gi|254355049|gb|EET13669.1| 30S ribosomal protein S4 [Legionella drancourtii LLAP12] Length = 206 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + PG HG ++ Y G+QLR KQ Sbjct: 1 MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNGY-GIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR +K A R +G T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KIRRLYGVL-EKQFRGYYKMAARMKGSTGENLMTLLEKRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 H+ +LVN + VN+ S+ GDV+ V+QK+K + A L+E+ P ++I+V+ + Sbjct: 119 THKAILVNDKVVNVPSFLVSPGDVVTVRQKAKSQGRIQAALALSEQRAPCDWITVDSSSF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P+ NLVVE YS+ Sbjct: 179 KGTFSTAPT---LTDLSSDYNVNLVVELYSK 206 >gi|309789644|ref|ZP_07684225.1| ribosomal protein S4 [Oscillochloris trichoides DG6] gi|308228380|gb|EFO82027.1| ribosomal protein S4 [Oscillochloris trichoides DG6] Length = 238 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 M++ K+ RR+G + + + +N RSY PG HG R+ + S +GLQL KQK K Sbjct: 33 MARYNGPVGKVSRRLGIGITEKGQRILNKRSYPPGQHGPNARRRQVSDYGLQLLEKQKAK 92 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR IF++A R G T L+S LE RLD +VYR T ARQ V H Sbjct: 93 FIYGVL-ERQFRRIFEQAARRSGVTGEYLLSLLERRLDNVVYRLGMATTRAQARQLVTHG 151 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV---PEYISVNHDNMV 176 H++V+GR NI S+ K G VI V+ +S++ A + + P+++ ++ ++ Sbjct: 152 HIMVDGRKTNIPSFTLKVGQVISVRPESRRRAYFKNLVDSGDLNKYRAPDWLRLDAADLS 211 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T + +P + L+VEFYSR Sbjct: 212 GTVIALPRR---EDAEAGINEQLIVEFYSR 238 >gi|104773806|ref|YP_618786.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122983978|sp|Q1GAV4|RS4_LACDA RecName: Full=30S ribosomal protein S4 gi|152060954|sp|Q04B92|RS4_LACDB RecName: Full=30S ribosomal protein S4 gi|103422887|emb|CAI97549.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|325125470|gb|ADY84800.1| 30s ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 203 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + RSY PG HG + + S +G+QL+ KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYIPGQHGPNHRGRLSEYGMQLQEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++FR++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MFG-LNERQFRTLFARAGKIREGQHGTNFMILLERRLDNVVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A + A P ++S + D M Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + P + LVVE+Y++ Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201 >gi|319789265|ref|YP_004150898.1| ribosomal protein S4 [Thermovibrio ammonificans HB-1] gi|317113767|gb|ADU96257.1| ribosomal protein S4 [Thermovibrio ammonificans HB-1] Length = 208 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLW------GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + K +I RR+G N++ + KS ++ R Y PG HG+ R+ K SY+G QL Sbjct: 1 MGRYTGPKWRIARRLGVNIYVGEEKSQKGKSILDRRPYPPGQHGRSRR-KISYYGRQLME 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K YYG + E++FR ++ A+R RG T NL+ LESRLD +VYR F + ARQ Sbjct: 60 KQKVKYYYG-VREEQFRRFYEMAERMRGQTGENLLKLLESRLDNVVYRLGFGKSHRHARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+LVNG+ V+ SY K GDVIEVK+KS+ + + E +LA+ R +P ++ ++ + Sbjct: 119 LVVHGHILVNGKKVDRPSYLVKPGDVIEVKEKSRDIPQIKEGMELAQRRGIPSWLELDPE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N P+ + +L+VE YS+ Sbjct: 179 NFKGVVKAEPTREEIEIPIEE---HLIVELYSK 208 >gi|256420685|ref|YP_003121338.1| ribosomal protein S4 [Chitinophaga pinensis DSM 2588] gi|256035593|gb|ACU59137.1| ribosomal protein S4 [Chitinophaga pinensis DSM 2588] Length = 201 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K KI R GE + G K + S PG HG R++ + + LQLR KQK K Sbjct: 1 MARYTGPKTKISRIFGEPILGNGKY-LGKNSNPPGQHGVSRKRKQLGEYALQLREKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++F ++F EA+R +G T LI LE+RLD V+R P+ AARQ V+H+ Sbjct: 60 YTYGVL-ERQFANLFVEANRRKGVTGEVLIKLLEARLDNAVFRLGIAPSRPAARQLVSHK 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ +N+ SY+ K GD+I +K + ++ + ++ N + TF Sbjct: 119 HITVNGQVMNVPSYQLKPGDIIGLKASATTNTAITSNIRGKNPKF-SWLDWNEKELKGTF 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P P ++ L+VE YS+ Sbjct: 178 IAYPER---ESVPENIKEQLIVELYSK 201 >gi|307154043|ref|YP_003889427.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 7822] gi|306984271|gb|ADN16152.1| ribosomal protein S4 [Cyanothece sp. PCC 7822] Length = 202 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLTRKNA--RRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ ++A R+ G T L+ LE RLD ++R TI AARQ VNH H Sbjct: 58 NYG-VSEKQLIRYVRKARRATGSTGQVLLQLLEMRLDNTIFRLGMAGTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN + V+I SY+C+ GDVI+VK + + V + ++P ++ + + + Sbjct: 117 ILVNDQVVDIASYQCRPGDVIKVKNQERSRKLVEANMEYPGLANLPSHLEFDKNTFIGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVEFYSR Sbjct: 177 NGVIER---EWIALNINELLVVEFYSR 200 >gi|116075050|ref|ZP_01472310.1| 30S ribosomal protein S4 [Synechococcus sp. RS9916] gi|116067247|gb|EAU73001.1| 30S ribosomal protein S4 [Synechococcus sp. RS9916] Length = 202 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQDGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++++ + +VP ++ ++ + A Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKKLAEANLEFPGLANVPPHLELDKSKLSAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 I---GRSEREWVALEINELLVVEYYSR 200 >gi|108758664|ref|YP_631524.1| 30S ribosomal protein S4 [Myxococcus xanthus DK 1622] gi|122981072|sp|Q1D749|RS4A_MYXXD RecName: Full=30S ribosomal protein S4 A gi|108462544|gb|ABF87729.1| ribosomal protein S4 [Myxococcus xanthus DK 1622] Length = 208 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +S +I RR ++ + K + R Y PG HGQ R Y G+QLR Sbjct: 1 MARYTASACRICRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGRVKFSGY-GVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR + A ++G T NL+ LE RLD +V+R F T ARQ Sbjct: 60 KQKVKRMYG-LLENQFRGYYHRASAAKGKTGDNLLQQLELRLDNVVFRMGFADTRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNGR VNI S+ K G +EV +KS+++ + EA + + R +P++IS++ Sbjct: 119 LVRHGHFQVNGRKVNIPSFAVKPGTAVEVVEKSRKVLRISEALETVDRRGIPQWISLDKK 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P+ +D+ P+ L+VE YS+ Sbjct: 179 AFKGTVTTVPNR-EDLTMPIS--EQLIVELYSK 208 >gi|258508250|ref|YP_003171001.1| 30S ribosomal protein S4P [Lactobacillus rhamnosus GG] gi|258539461|ref|YP_003173960.1| 30S ribosomal protein S4P [Lactobacillus rhamnosus Lc 705] gi|257148177|emb|CAR87150.1| SSU/30S ribosomal protein S4P [Lactobacillus rhamnosus GG] gi|257151137|emb|CAR90109.1| SSU/30S ribosomal protein S4P [Lactobacillus rhamnosus Lc 705] gi|259649567|dbj|BAI41729.1| 30S ribosomal protein S4 [Lactobacillus rhamnosus GG] Length = 203 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G +L G K + R Y PG HG + K S +G QLR KQK++ Sbjct: 1 MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F A + + T N + LE+RLD +V+R + ARQ VNH Sbjct: 60 MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ ++I SY + G VI ++++S+ LA V EA + P Y++ + + + Sbjct: 119 HITVDGKRLDIPSYEVQPGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + P + +LVVE+Y Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199 >gi|33866226|ref|NP_897785.1| 30S ribosomal protein S4 [Synechococcus sp. WH 8102] gi|41017824|sp|Q7U5K9|RS4_SYNPX RecName: Full=30S ribosomal protein S4 gi|33639201|emb|CAE08209.1| 30S ribosomal protein S4 [Synechococcus sp. WH 8102] Length = 202 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MARYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDV+ ++++ + +VP ++ ++ + A Sbjct: 117 VTVNGRVTDIASYQCKPGDVVAIRERKCSKQLAEGNLEFPGLANVPTHLELDKAKLSAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 T---GRCEREWVALEINELLVVEYYSR 200 >gi|90994410|ref|YP_536900.1| ribosomal protein S4 [Porphyra yezoensis] gi|122194732|sp|Q1XDR8|RR4_PORYE RecName: Full=30S ribosomal protein S4, chloroplastic gi|90818974|dbj|BAE92343.1| 30S ribosomal protein S4 [Porphyra yezoensis] Length = 201 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G +L G + + RSY PG HGQ+ + KPS + ++L KQK++ Sbjct: 1 MSRYRGPRVRISRRLG-DLPGLSRKAI-KRSYPPGEHGQKSR-KPSEYAVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ K A + +G T L+ LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-LSEKQLFKYVKAAKKLQGSTGQILLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + +NG+ V+I SY+CK G+ I VK + V ++P ++ +N N+ Sbjct: 117 ICINGQVVSICSYQCKPGESISVKNQEASRKLVENYLAFPGLANIPSHLELNKSNLSGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LV+E+YSR Sbjct: 177 NGVIDR---EWVALQLNELLVIEYYSR 200 >gi|157164972|ref|YP_001467696.1| 30S ribosomal protein S4 [Campylobacter concisus 13826] gi|171855075|sp|A7ZFY8|RS4_CAMC1 RecName: Full=30S ribosomal protein S4 gi|112800789|gb|EAT98133.1| ribosomal protein S4 [Campylobacter concisus 13826] Length = 208 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR+G +L + KS + R Y PG HGQRR Y GLQLR Sbjct: 1 MARYTGPVEKLERRLGVSLALKGERRLAGKSALEKRPYAPGQHGQRRAKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F+EA R G+T L+ LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFQEAARREGNTGALLVQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I SYR + G +EV +KSK ++ A L A+ + ++ V + Sbjct: 119 LVTHGHILVNGKRVDIPSYRVEPGSKVEVAEKSKNNPQIVRAIDLTAQTGIVAWVDVEKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + + + ++ +VE YS+ Sbjct: 179 KKFGIFTRNPEREEVI---IPVEERFIVELYSK 208 >gi|157737265|ref|YP_001489948.1| 30S ribosomal protein S4 [Arcobacter butzleri RM4018] gi|315636982|ref|ZP_07892206.1| 30S ribosomal protein S4 [Arcobacter butzleri JV22] gi|172045648|sp|A8ETK5|RS4_ARCB4 RecName: Full=30S ribosomal protein S4 gi|157699119|gb|ABV67279.1| 30S ribosomal protein S4 [Arcobacter butzleri RM4018] gi|315478812|gb|EFU69521.1| 30S ribosomal protein S4 [Arcobacter butzleri JV22] Length = 208 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR+ +L + KS + R + PG HGQRR Y GLQLR Sbjct: 1 MARYRGPVEKIERRLDADLGLKGERRLSGKSALEKRPFAPGQHGQRRAKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K YG ISEK+FR+ FKEA R G+T LIS +E RLD +V+R F T ARQ Sbjct: 60 KQKVKFMYG-ISEKQFRNYFKEAVRREGNTGAILISLIEQRLDNVVFRMGFATTRANARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 F H HVLV+G+ V+I SY K G IE+K+KSK V+ A +L + + ++++V+ D Sbjct: 119 FTTHGHVLVDGKKVDIPSYLVKPGQKIEIKEKSKSNPQVVRALELTNQTGMVDWVNVDKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F RIP+ + V + ++ L+VE YS+ Sbjct: 179 KVFGIFTRIPAREEVV---IPVEERLIVELYSK 208 >gi|147676683|ref|YP_001210898.1| 30S ribosomal protein S4 [Pelotomaculum thermopropionicum SI] gi|189045389|sp|A5D5E8|RS4_PELTS RecName: Full=30S ribosomal protein S4 gi|146272780|dbj|BAF58529.1| ribosomal protein S4 and related proteins [Pelotomaculum thermopropionicum SI] Length = 208 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR G L+ + PK ++ RSY PG HGQ RK Y GLQLR Sbjct: 1 MARYTGSVCRLCRREGLKLYLKGDRCYTPKCAIDRRSYAPGQHGQGRKKVSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E +FR F++A+R G T NL+ LE RLD ++YR + ARQ Sbjct: 60 KQKARRIYG-ILESQFRRYFEKAERQPGITGENLLRLLERRLDNVIYRLGLGASRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H VNGR VNI SY K GDVI V+ +SK+ + E + A+R P ++ D Sbjct: 119 LVRHGHFTVNGRRVNIPSYLVKPGDVIAVRDQSKESPRIKELLERAADRTPPAWLEYEAD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A +P+ + +Q +L+VE YSR Sbjct: 179 QARARVAALPARDQ---IDAPVQEHLIVELYSR 208 >gi|110801849|ref|YP_699635.1| 30S ribosomal protein S4 [Clostridium perfringens SM101] gi|122956505|sp|Q0SQH2|RS4A_CLOPS RecName: Full=30S ribosomal protein S4 A gi|110682350|gb|ABG85720.1| 30S ribosomal protein S4 [Clostridium perfringens SM101] Length = 206 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K RSY PG HG RK +Y G QLR Sbjct: 1 MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR+ ++ A++ RG NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 VNH H LVNG+ V+I S++ DVI V +KS+ ++ + +P+++ N +N Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ +D+ PV L+VE YS+ Sbjct: 178 FEGKVIAEPAR-EDIDVPV--NETLIVELYSK 206 >gi|314982287|gb|EFT26380.1| ribosomal protein S4 [Propionibacterium acnes HL110PA3] Length = 201 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G KS R Y PG+HG+ R Y LQLR KQK + Sbjct: 1 MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EADR++G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQKVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR D+I+V++KSK L ++ A + E RDVP ++ V + Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + V + + +VE YS+ Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201 >gi|22297691|ref|NP_680938.1| 30S ribosomal protein S4 [Thermosynechococcus elongatus BP-1] gi|26399368|sp|P59134|RS4_THEEB RecName: Full=30S ribosomal protein S4 gi|22293868|dbj|BAC07700.1| 30S ribosomal protein S4 [Thermosynechococcus elongatus BP-1] Length = 202 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I RR+GE K P RSY PG HGQ RK + Y L+L KQK++ Sbjct: 1 MARYRGPRLRIVRRLGELAGLTRKVP--KRSYPPGQHGQARKKRSEY-ALRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ ++A R G T L+ LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-VSERQLVRYVRKARRVSGSTGQTLLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR+V+I SY+C+ GDVI V+ + V Q ++P ++ ++ + Sbjct: 117 ILVNGRNVSIPSYQCRPGDVITVRDNERSRRLVETNLQNPGLANLPSHLELDKSTLTGRV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 TGIVERQ---WVALEVNELLVVEYYSR 200 >gi|116333868|ref|YP_795395.1| 30S ribosomal protein S4 [Lactobacillus brevis ATCC 367] gi|122269445|sp|Q03R08|RS4_LACBA RecName: Full=30S ribosomal protein S4 gi|116099215|gb|ABJ64364.1| SSU ribosomal protein S4P [Lactobacillus brevis ATCC 367] Length = 201 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G +L G K +N R Y PG HGQ R+ K S +G QLR KQK++ Sbjct: 1 MSRYTGPSWRISRRLGVSLSGTGKE-LNRRPYAPGDHGQGRRQKLSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++FK A + + T N + LE RLD +VYR T ARQ VNH Sbjct: 60 TYG-MTERQFYNLFKRAGKIKEGTHGTNFMILLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G VI V++KSK +A + A + A P+Y+ + D + + Sbjct: 119 HITVDGQRVDIPSYEVKIGQVISVREKSKDMAIIKGAVE-AVVGRPQYVEFDADKLAGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + +L+VE+Y+R Sbjct: 178 TRFPQREE---LDAELDDSLIVEYYNR 201 >gi|320160440|ref|YP_004173664.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1] gi|319994293|dbj|BAJ63064.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1] Length = 212 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 109/216 (50%), Gaps = 14/216 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHG---QRRKSKPSYFGLQ 51 M K K+ RR GE L+ + PK R + PG HG Q R + S + Q Sbjct: 1 MGKYLGPVCKLCRREGEKLFLKGERCYSPKCSFEKRGFAPGQHGRTQQGRSERESDYARQ 60 Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 LRAKQK ++ YG I E++FR F A R +G T NL+ LE RLD +V+R F + Sbjct: 61 LRAKQKARRVYG-IFERQFRRYFGLALRKKGLTGLNLLQTLEMRLDNVVFRMGFASSRAQ 119 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISV 170 ARQ VNH H+ VN +I S K GD+I VK+ ++ L + + +R P +I Sbjct: 120 ARQLVNHGHIQVNNHRADIPSMLVKPGDIISVKESARSLTYWKDLLDVVDRRTCPMWIDR 179 Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + N+ +R+P + + L+VE+YSR Sbjct: 180 DTKNLSGRILRLPERSE---IDGNLNEQLIVEYYSR 212 >gi|94985941|ref|YP_605305.1| 30S ribosomal protein S4 [Deinococcus geothermalis DSM 11300] gi|152060945|sp|Q1IX98|RS4_DEIGD RecName: Full=30S ribosomal protein S4 gi|94556222|gb|ABF46136.1| ribosomal protein S4 [Deinococcus geothermalis DSM 11300] Length = 206 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 120/210 (57%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 M + S K+ RR G NL K ++ R Y PG HGQRR + +PS + ++LR KQK Sbjct: 1 MGRFRGSITKLSRREGINLAETEKVQKYLDRRPYAPGQHGQRRGRGRPSDYSVRLREKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + + YG ++EK+FR++F+EA G T + LE RLD +V+R F T ARQFV Sbjct: 61 LARLYG-VNEKQFRNLFEEAANVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVG 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMV 176 H H+LVNG+ V+I SYR + GD I V + S+ + + E + R V +I +N D Sbjct: 120 HGHILVNGKRVDIPSYRVRIGDEISVAEGSRSMGFIQENMEAQKRRRVSPWIELNPDTFT 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TFVR+P+ + + N ++E+YSR Sbjct: 180 GTFVRLPAR---EDLALPINENFIIEYYSR 206 >gi|288818043|ref|YP_003432390.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6] gi|288787442|dbj|BAI69189.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6] gi|308751644|gb|ADO45127.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6] Length = 209 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 8/211 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRP--KSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQ 56 MS+ K+DRR G L R ++ R++ PG HG+ RK K + FGL+L KQ Sbjct: 1 MSRYIGPWSKVDRRFGAVLSNRKSAGKVLSRRNFPPGQHGRVKGRKRKLTEFGLRLMEKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K YG + EK+FR F+EA +++G+T L+ LE RLD +VYR T ARQ + Sbjct: 61 KLKFLYGGLREKQFRRYFEEASKAKGNTGQVLLQLLERRLDNVVYRLGMAVTRRQARQMI 120 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H H+LVNG+ V+I SYR + GD+IE+K S+ + +E Q + R +P ++ ++ +N Sbjct: 121 AHGHILVNGKKVDIPSYRVQVGDIIELKPASRDVPQFIENIQSIDPRSIPPWLELDKENF 180 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P K+V V + V+EFYSR Sbjct: 181 RGKVIDLP---KEVELEVPVNVQYVIEFYSR 208 >gi|227877293|ref|ZP_03995366.1| ribosomal protein S4 [Lactobacillus crispatus JV-V01] gi|227863149|gb|EEJ70595.1| ribosomal protein S4 [Lactobacillus crispatus JV-V01] Length = 221 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG + + S +G QL KQK++ Sbjct: 19 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 77 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD++VYR T ARQ VNH Sbjct: 78 MYG-LNERQFRTLFTRAGKIREGQHGVNFMILLERRLDSLVYRLGLATTREQARQLVNHG 136 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A + A P ++S + + M T Sbjct: 137 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALE-AVTARPSFVSFDENKMEGTL 195 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + LVVE+Y++ Sbjct: 196 VRLPERDEMEP---EIDEALVVEWYNK 219 >gi|300864160|ref|ZP_07109054.1| 30S ribosomal protein S4 [Oscillatoria sp. PCC 6506] gi|300337850|emb|CBN54200.1| 30S ribosomal protein S4 [Oscillatoria sp. PCC 6506] Length = 202 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KSP R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGDLPGLTRKSP--RRAYPPGQHGQNRKKRSEY-AVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ ++A R G T L+ LE RLD V+R PTI AARQ VNH H Sbjct: 58 NYG-ISERQLLRYVRKARRVTGSTGQVLLQMLEMRLDNTVFRMGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VN R+V+I S++CK GDV+ VK + V + +P ++ + +V Sbjct: 117 VTVNDRTVDIASFQCKPGDVVAVKNTERSRLLVEANLKYPGLAHLPSHLEFDKQKLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 NGTVER---EWIALQVNELLVVEYYSR 200 >gi|168211877|ref|ZP_02637502.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626] gi|170710184|gb|EDT22366.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626] Length = 206 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K RSY PG HG RK +Y G QLR Sbjct: 1 MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR+ ++ A++ RG NL+ LE RLD +VYR + + ARQ Sbjct: 60 KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 VNH H LVNG+ V+I S++ D I V +KS+ ++ + +P+++ N +N Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDFITVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P+ +D+ PV L+VE YS+ Sbjct: 178 FEGKVVAEPAR-EDIDVPV--NETLIVELYSK 206 >gi|86158343|ref|YP_465128.1| 30S ribosomal protein S4 [Anaeromyxobacter dehalogenans 2CP-C] gi|197122365|ref|YP_002134316.1| 30S ribosomal protein S4 [Anaeromyxobacter sp. K] gi|220917147|ref|YP_002492451.1| RNA-binding S4 domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|123497980|sp|Q2IJ65|RS4_ANADE RecName: Full=30S ribosomal protein S4 gi|226697798|sp|B4UBC5|RS4_ANASK RecName: Full=30S ribosomal protein S4 gi|254764563|sp|B8J886|RS4_ANAD2 RecName: Full=30S ribosomal protein S4 gi|85774854|gb|ABC81691.1| SSU ribosomal protein S4P [Anaeromyxobacter dehalogenans 2CP-C] gi|196172214|gb|ACG73187.1| RNA-binding S4 domain protein [Anaeromyxobacter sp. K] gi|219955001|gb|ACL65385.1| RNA-binding S4 domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 208 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR ++ + K + R Y PG HGQ R +K S +G+QLR Sbjct: 1 MARYSESVCRLCRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGR-TKFSEYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E FR ++ A ++G T NL+ LE RLD +V+R F T ARQ Sbjct: 60 KQKVKRMYG-LLEAGFRHAYQNAAAAKGKTGENLLQTLELRLDNVVFRLGFADTRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNGR VNI SY C+ GD +E+K +SK++ + EA + + R VP ++ ++ Sbjct: 119 LVRHGHFKVNGRKVNIPSYLCRPGDKVELKDRSKKVVRITEALEAVDRRGVPAWLDLDKG 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T P+ +D+ P +Q L+VE YS+ Sbjct: 179 GFKGTVKTSPAR-EDITMP--IQEQLIVELYSK 208 >gi|326803755|ref|YP_004321573.1| ribosomal protein S4 [Aerococcus urinae ACS-120-V-Col10a] gi|326650742|gb|AEA00925.1| ribosomal protein S4 [Aerococcus urinae ACS-120-V-Col10a] Length = 203 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ K RR G +L G K + R Y PG HG R+ S +GLQL+ KQK++ Sbjct: 1 MSRYTGPSWKKSRRYGISLSGTGKE-LARRPYAPGQHGPNQRRKSLSEYGLQLQEKQKLR 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG ++EK+F +++ A++ + T N ++ LE RLD +VYR T ARQ V+H Sbjct: 60 FIYG-LTEKQFHNLYNRAEKIKEGTVGTNFMTLLEQRLDNMVYRLGLASTRRQARQLVSH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+ V+G+ V+I SY + G VI V++KSK L + ++ + VP Y+ + D + + Sbjct: 119 GHITVDGKRVDIPSYIVEVGQVIGVREKSKNLQVIKDSVEGLYGHVP-YVEFDADKLEGS 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + + +LVVE+Y Sbjct: 178 LSRLPERDE---MNQEIDESLVVEYY 200 >gi|219849861|ref|YP_002464294.1| 30S ribosomal protein S4 [Chloroflexus aggregans DSM 9485] gi|254764578|sp|B8G6P9|RS4_CHLAD RecName: Full=30S ribosomal protein S4 gi|219544120|gb|ACL25858.1| ribosomal protein S4 [Chloroflexus aggregans DSM 9485] Length = 206 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 109/210 (51%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59 M++ K+ RR+G + + + +N R PG HG R+ S +G QLR KQK K Sbjct: 1 MARFRGPVGKVSRRLGIGITEKGQRILNKRPDPPGQHGAAARRRALSDYGAQLREKQKAK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E++FR +F++A R G T L+S LE RLD +VYR F T ARQ VNH Sbjct: 61 FIYGVL-ERQFRRLFEQAARRSGVTGEYLLSLLERRLDNVVYRLGFATTRAQARQLVNHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMV 176 H++V+GR NI SY K G VI V+ +S+ L + PE++ +N + Sbjct: 120 HIVVDGRKTNIPSYTVKVGQVIAVRPQSRSRTYFKNLVDSGVLNKHRAPEWLRLNPAELS 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T V +P + L+VEFYSR Sbjct: 180 GTVVALPRR---EDAEAGINEQLIVEFYSR 206 >gi|224437308|ref|ZP_03658280.1| 30S ribosomal protein S4 [Helicobacter cinaedi CCUG 18818] gi|313143763|ref|ZP_07805956.1| 30S ribosomal protein S4 [Helicobacter cinaedi CCUG 18818] gi|313128794|gb|EFR46411.1| 30S ribosomal protein S4 [Helicobacter cinaedi CCUG 18818] Length = 208 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R YGPG HGQ+R Y GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQKRGKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR++F+EA+R G+T NL+ +E RLD +VYR F T ARQ Sbjct: 60 KQKAKIMYG-VSEKQFRALFREANRQEGNTGENLVRIIEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I SY K G IEVK+KSK V+ A L A+ + ++ V+ + Sbjct: 119 LVTHGHILVNGKHVDIPSYMVKPGQKIEVKEKSKNNPQVVRAIDLTAQTGIVPWVDVDKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ L+VE YS+ Sbjct: 179 KKFGIFTRFPQREEVV---IPIEERLIVELYSK 208 >gi|292492445|ref|YP_003527884.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4] gi|291581040|gb|ADE15497.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4] Length = 208 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 128/212 (60%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQ-RRKSKPSYFGLQLRAK 55 M+K K K RR G +L+ + P++++ PG HG R+++ S + LQLR K Sbjct: 1 MAKYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGARRARMSDYALQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + EK+FR +KEA R RG T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKLRRMYGVL-EKQFRRYYKEAARRRGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDN 174 ++H+ +LVNG+ +N+ SY+ + DV+ V++K+K+ + A +LA+ R ++I +N Sbjct: 120 ISHKGILVNGKVINVPSYQIRAEDVVSVREKAKKQDRIKFALELAQARPELDWIEINMGK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF R+P + P +Q NLVVE YS+ Sbjct: 180 LEGTFKRVPERSELAP---DIQENLVVELYSK 208 >gi|87122791|ref|ZP_01078664.1| 30S ribosomal protein S4 [Marinomonas sp. MED121] gi|86161956|gb|EAQ63248.1| 30S ribosomal protein S4 [Marinomonas sp. MED121] Length = 206 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS-PVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L + S + ++ PG+HG R+ + S +GLQLR KQ Sbjct: 1 MARYIGPTCKLSRREGTDLQLKSGSRALESKCKAETVPGVHGA-RRGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +K+A R +G T NL+ LESRLD +VYRA F T +RQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKDAARGKGATGENLLQLLESRLDNVVYRAGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 H+ + VNG +VNI SY+ K GDV+ V++K+K+ + A +L+ R ++ + + Sbjct: 119 AHKGIQVNGATVNIASYQVKAGDVVSVREKAKKQLRIQNAIELSKNRTSTHWVETDATKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A F P + NL+VE YS+ Sbjct: 179 EAVFKAAPERSD---LSAEINENLIVELYSK 206 >gi|325684425|gb|EGD26593.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 203 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + RSY PG HG + + S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYVPGQHGPNHRGRLSEYGLQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G +SE++FR++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MFG-LSERQFRTLFVRAGKIREGQHGINFMILLERRLDNVVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A + A P ++S + D M Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + P + LVVE+Y++ Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201 >gi|124025174|ref|YP_001014290.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. NATL1A] gi|152112245|sp|A2C0L5|RS4_PROM1 RecName: Full=30S ribosomal protein S4 gi|123960242|gb|ABM75025.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. NATL1A] Length = 202 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RS+ PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSHPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE+RLD + +R F PTI +RQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ +I SY+CK GDVI ++ + +VP ++ ++ + A Sbjct: 117 VTVNGKITDIASYQCKAGDVIAIRDNKASKQLAQANLEFPGLANVPPHLELDKTKLSAKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 TA---KTDREWVAIEINELLVVEYYSR 200 >gi|256842855|ref|ZP_05548343.1| 30S ribosomal protein S4 [Lactobacillus crispatus 125-2-CHN] gi|256848781|ref|ZP_05554215.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-1A-US] gi|262045821|ref|ZP_06018785.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-3A-US] gi|293381690|ref|ZP_06627671.1| 30S ribosomal protein S4 [Lactobacillus crispatus 214-1] gi|295692644|ref|YP_003601254.1| 30S ribosomal protein s4 [Lactobacillus crispatus ST1] gi|256614275|gb|EEU19476.1| 30S ribosomal protein S4 [Lactobacillus crispatus 125-2-CHN] gi|256714320|gb|EEU29307.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-1A-US] gi|260573780|gb|EEX30336.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-3A-US] gi|290921737|gb|EFD98758.1| 30S ribosomal protein S4 [Lactobacillus crispatus 214-1] gi|295030750|emb|CBL50229.1| 30S ribosomal protein S4 [Lactobacillus crispatus ST1] Length = 203 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD++VYR T ARQ VNH Sbjct: 60 MYG-LNERQFRTLFTRAGKIREGQHGVNFMILLERRLDSLVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A + A P ++S + + M T Sbjct: 119 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALE-AVTARPSFVSFDENKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDEALVVEWYNK 201 >gi|199597503|ref|ZP_03210932.1| Ribosomal protein S4 [Lactobacillus rhamnosus HN001] gi|199591526|gb|EDY99603.1| Ribosomal protein S4 [Lactobacillus rhamnosus HN001] Length = 203 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G +L G K + R Y PG HG + K S +G QLR KQK++ Sbjct: 1 MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGNHGANNRRKISEYGQQLREKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F A + + T N + LE+RLD +V+R + ARQ VNH Sbjct: 60 MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ ++I SY + G VI ++++S+ LA V EA + P Y++ + + + Sbjct: 119 HITVDGKRLDIPSYEVQPGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + P + +LVVE+Y Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199 >gi|313123420|ref|YP_004033679.1| 30S ribosomal protein s4 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279983|gb|ADQ60702.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 203 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + RSY PG HG + + S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYVPGQHGPNHRGRLSEYGMQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G +SE++FR++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MFG-LSERQFRTLFVRAGKIREGQHGINFMILLERRLDNVVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A + A P ++S + D M Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + P + LVVE+Y++ Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201 >gi|118474712|ref|YP_891268.1| 30S ribosomal protein S4 [Campylobacter fetus subsp. fetus 82-40] gi|152060940|sp|A0RM35|RS4_CAMFF RecName: Full=30S ribosomal protein S4 gi|118413938|gb|ABK82358.1| ribosomal protein S4 [Campylobacter fetus subsp. fetus 82-40] Length = 208 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR+G +L + KS ++ R Y PG HGQ RK+K S +GLQLR Sbjct: 1 MARYRGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQ-RKTKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFSEAARREGNTGALLIGLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I SYR G+ IEV +KSK ++ A +L + + ++ V D Sbjct: 119 LVTHGHILVNGKKVDIPSYRVTAGEKIEVAEKSKTNPQIVRAIELTNQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F RIP + V + ++ +VE YS+ Sbjct: 179 KKYGIFTRIPEREEVV---IPVEERYIVELYSK 208 >gi|319942197|ref|ZP_08016513.1| 30S ribosomal protein S4 [Sutterella wadsworthensis 3_1_45B] gi|319804250|gb|EFW01142.1| 30S ribosomal protein S4 [Sutterella wadsworthensis 3_1_45B] Length = 208 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY----GPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + + ++ PG HG+ ++ S +G Q+R Sbjct: 1 MARYLGPKLKLSRREGIDLNLKSARRSFESKVKDVGSKPGQHGKISGARTSDYGNQMRET 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK K+ YG + E++FR F EA R RG+T L+ LESRLD +VYR F T +RQ Sbjct: 61 QKAKRMYGVL-ERQFRRYFAEASRLRGNTGEKLLQLLESRLDNVVYRMGFGSTRAESRQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDN 174 V+H + VNGR VNI SY + GDVI +++K+++ + EA +LA+++ P ++ V+ Sbjct: 120 VSHGAIEVNGRKVNIPSYSVRAGDVITIREKAQKQVRIAEALELAQQNGFPAWVEVDAKK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P+ + P + L++E YSR Sbjct: 180 FTGTFKNAPARDEIAP---EINEALIIERYSR 208 >gi|158520749|ref|YP_001528619.1| RNA-binding S4 domain-containing protein [Desulfococcus oleovorans Hxd3] gi|226732176|sp|A8ZV81|RS4_DESOH RecName: Full=30S ribosomal protein S4 gi|158509575|gb|ABW66542.1| RNA-binding S4 domain protein [Desulfococcus oleovorans Hxd3] Length = 208 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + S ++ RR L+ + K + R Y PG HGQ R Y G+QLR Sbjct: 1 MGRYRESVCRLCRRENLKLFLKGDRCFSDKCAFDRRGYPPGEHGQLRPKFSGY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG +SE +FR +F EADR +G T L+ LESRLD VYR FV + RQ Sbjct: 60 KQKVKRMYG-LSEGQFRRVFAEADRRKGITGSTLLVLLESRLDNAVYRLGFVNSRTQGRQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 + H H LVNG++V+I SY GDVIEV++KS+ + + E+ E R VP+++S+ + Sbjct: 119 LIRHNHFLVNGKNVDIPSYVLSPGDVIEVREKSRNMQVIDESLAAVERRGVPQWLSLEKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +P +D+ P +Q L+VE YS+ Sbjct: 179 NKRGVVKNLPVR-EDITIP--IQEQLIVELYSK 208 >gi|320352938|ref|YP_004194277.1| 30S ribosomal protein S4P [Desulfobulbus propionicus DSM 2032] gi|320121440|gb|ADW16986.1| SSU ribosomal protein S4P [Desulfobulbus propionicus DSM 2032] Length = 209 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR ++ + K RS+ PG HGQ R K S + +QLR Sbjct: 1 MARYTGASCRLCRRENLKMFLKGDRCYSDKCAFERRSFAPGQHGQNRFRKVSDYAVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A+R++G T L+ LE RLD ++YR+ F + ARQ Sbjct: 61 KQKVKQMYGML-EAQFRRYFERAERAKGVTGETLLIMLERRLDNVLYRSGFASSRDQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H +NG+ VNI S++ GD+I +K+K ++ V++ + A R +P ++ ++ Sbjct: 120 MVRHNLFTLNGKKVNIPSHQVNAGDIIALKEKYQKSEQVIDNLEGAVRRGLPSWLELDQA 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + + +Q L+VE YS+ Sbjct: 180 KFHCAVKALPNREE---ITMPIQEQLIVELYSK 209 >gi|223038545|ref|ZP_03608839.1| ribosomal protein S4 [Campylobacter rectus RM3267] gi|255321747|ref|ZP_05362902.1| ribosomal protein S4 [Campylobacter showae RM3277] gi|222880402|gb|EEF15489.1| ribosomal protein S4 [Campylobacter rectus RM3267] gi|255301227|gb|EET80489.1| ribosomal protein S4 [Campylobacter showae RM3277] Length = 208 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR+G +L + KS ++ R Y PG HGQRR Y GLQLR Sbjct: 1 MARYRGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQRRSKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FR +F+EA R G+T L+ LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-ISEKQFRRLFQEAARREGNTGALLVQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I SYR + G +EV +KSK ++ A L A+ + ++ V D Sbjct: 119 LVTHGHILVNGKRVDIPSYRVQAGAKVEVIEKSKNNPQIVRAIDLTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KKFGIFTRTPEREEVV---IPVEERFIVELYSK 208 >gi|220903959|ref|YP_002479271.1| ribosomal protein S4 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254764584|sp|B8IYL6|RS4_DESDA RecName: Full=30S ribosomal protein S4 gi|219868258|gb|ACL48593.1| ribosomal protein S4 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 208 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K +K ++ RR G L+ + K + R Y PG HG+ RK Y +QLR Sbjct: 1 MAKYTEAKCRMCRREGCKLFLKGDRCFTDKCAYDRRPYAPGQHGRARKKVSEY-AVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I E++F F +AD +G T NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKTRRIYG-ILERQFHGYFVKADMQKGVTGTNLLVILERRLDNVVYRLGFANSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H +NGR VNI S + + GD IEV +K++++ + EA + +A R P ++ + Sbjct: 119 LVRHGVFTLNGRKVNIPSLQVRLGDTIEVPEKNRKIPVLAEAQEVIARRGCPAWLEADGA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P D+ +PV L+VE YS+ Sbjct: 179 AFKGTVKAMPQR-DDIQFPV--NEQLIVELYSK 208 >gi|52840598|ref|YP_094397.1| 30S ribosomal protein S4 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54293345|ref|YP_125760.1| 30S ribosomal protein S4 [Legionella pneumophila str. Lens] gi|148361031|ref|YP_001252238.1| 30S ribosomal protein S4 [Legionella pneumophila str. Corby] gi|296105901|ref|YP_003617601.1| small subunit ribosomal protein S4 [Legionella pneumophila 2300/99 Alcoy] gi|61215402|sp|Q5WZI8|RS4_LEGPL RecName: Full=30S ribosomal protein S4 gi|61215429|sp|Q5ZYL9|RS4_LEGPH RecName: Full=30S ribosomal protein S4 gi|172047874|sp|A5IHP2|RS4_LEGPC RecName: Full=30S ribosomal protein S4 gi|52627709|gb|AAU26450.1| 30S ribosomal protein S4 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53753177|emb|CAH14624.1| 30S ribosomal subunit protein S4 [Legionella pneumophila str. Lens] gi|148282804|gb|ABQ56892.1| 30S ribosomal protein S4 [Legionella pneumophila str. Corby] gi|295647802|gb|ADG23649.1| small subunit ribosomal protein S4 [Legionella pneumophila 2300/99 Alcoy] gi|307609161|emb|CBW98617.1| 30S ribosomal subunit protein S4 [Legionella pneumophila 130b] Length = 206 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + PG HG ++ SY G+QLR KQ Sbjct: 1 MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSY-GIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I EK+FR+ +K+A R +G T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KIRRLYG-ILEKQFRNYYKKAARQKGSTGENLMALLERRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 H+ +LVN + VN+ S+ GD + V+QK+K + A L+E+ P ++I+V+ + Sbjct: 119 AHKAILVNDKVVNVPSFLVNPGDTVSVRQKAKNQGRIQAALALSEQRAPCDWITVDTGSF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P+ + NLVVE YS+ Sbjct: 179 KGTFSTAPT---LMDLSSDYNVNLVVELYSK 206 >gi|54296389|ref|YP_122758.1| 30S ribosomal protein S4 [Legionella pneumophila str. Paris] gi|61215409|sp|Q5X835|RS4_LEGPA RecName: Full=30S ribosomal protein S4 gi|53750174|emb|CAH11566.1| 30S ribosomal subunit protein S4 [Legionella pneumophila str. Paris] Length = 206 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L + PG HG ++ SY G+QLR KQ Sbjct: 1 MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSY-GIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I EK+FR+ +K+A R +G T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KIRRLYG-ILEKQFRNYYKKAARQKGSTGENLMALLERRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 H+ +LVN + VN+ S+ GD I V+QK+K + A L+E+ P ++I+V+ + Sbjct: 119 AHKAILVNDKVVNVPSFLVNPGDTISVRQKAKNQGRIQAALALSEQRAPCDWITVDTGSF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P+ + NLVVE YS+ Sbjct: 179 KGTFSTAPT---LMDLSSDYNVNLVVELYSK 206 >gi|308272954|emb|CBX29558.1| 30S ribosomal protein S4 [uncultured Desulfobacterium sp.] Length = 209 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR ++ + K + RSY PG HGQRR K S +G+QLR Sbjct: 1 MARYIGAVCRLCRRENLKMFLKGDRCYSDKCAFDRRSYSPGQHGQRRGRKFSDYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG +SEK+FR F+ A+R + T NL+ LE RLD +VYR FV + R Sbjct: 61 KQKTKRLYG-LSEKQFRLFFERAERQKNITGTNLLVMLERRLDNVVYRLGFVASRTQGRH 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 FV H H +NG+ +NI SY K GD++E+ + S+ + ++ ++ A R VP+++ + D Sbjct: 120 FVRHNHFKINGKKINIPSYLIKVGDILELNETSRNIKAISDSLDAVARRGVPQWLELEKD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N P +D+ P +Q L+VE YS+ Sbjct: 180 NFKGRIKSFPVR-EDITMP--IQEQLIVELYSK 209 >gi|15807121|ref|NP_295850.1| 30S ribosomal protein S4 [Deinococcus radiodurans R1] gi|26399534|sp|Q9RSJ7|RS4_DEIRA RecName: Full=30S ribosomal protein S4 gi|6459925|gb|AAF11677.1|AE002047_10 ribosomal protein S4 [Deinococcus radiodurans R1] Length = 205 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 119/209 (56%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + S K RR G NL K ++ R YGPG HGQRRK +PS + ++LR KQK+ Sbjct: 1 MGRFRGSITKQSRREGINLAETEKVQKYLDRRPYGPGQHGQRRKGRPSDYSVRLREKQKL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ++EK+FR++F+EA G T + LE RLD +V+R F T ARQFV H Sbjct: 61 ARLYG-MNEKQFRNLFEEASNVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVGH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVA 177 H+LVNG+ V+I SYR K GD I V + S+ + + E R V +I ++ DN Sbjct: 120 GHILVNGKKVDIASYRVKIGDEISVAEGSRSMGFIQENMDAQKRRRVSPWIEMDQDNFKG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P+ + + N ++E+YSR Sbjct: 180 TFSRLPAR---EDLALPINENFIIEYYSR 205 >gi|94987423|ref|YP_595356.1| 30S ribosomal protein S4 [Lawsonia intracellularis PHE/MN1-00] gi|152060957|sp|Q1MPP2|RS4_LAWIP RecName: Full=30S ribosomal protein S4 gi|94731672|emb|CAJ55035.1| ribosomal protein S4 [Lawsonia intracellularis PHE/MN1-00] Length = 208 Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K +K ++ RR G L+ + K + R Y PG HG+ RK K S + +QLR Sbjct: 1 MAKYNDAKCRLCRREGTKLFLKGDRCFTDKCAYDRRPYAPGQHGRVRK-KMSDYAIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+FR F AD ++G T NL+S+LE RLD +VYR + ARQ Sbjct: 60 KQKVRRVYGVL-EKQFREYFVHADMAKGITGVNLLSYLERRLDNVVYRLGLANSRVQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 + H +NG V I S + GD IEV +K+++++ V +A + R P ++ ++ Sbjct: 119 LIRHGIFTLNGHKVTIPSLQVNVGDSIEVPEKNRKISVVADAQSIVGRRGCPSWLELDAS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +D+ +P + +L+VE YS+ Sbjct: 179 TFKGVVKALPQR-EDIQFP--INEHLIVELYSK 208 >gi|194477170|ref|YP_002049349.1| 30S ribosomal protein S4 [Paulinella chromatophora] gi|171192177|gb|ACB43139.1| 30S ribosomal protein S4 [Paulinella chromatophora] Length = 203 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I RR+G+ KS R+Y PG HGQ + K S + ++L KQK++ Sbjct: 1 MARYRGPRLRITRRLGDLPGLTRKSA--KRAYPPGQHGQVARRKRSEYAIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LESRLD I +R F PT+ ARQ VNH H Sbjct: 59 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLESRLDNICFRLGFGPTVPGARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNGR ++I SY+CK GD+I +++ + + +VP ++ + + Sbjct: 118 VLVNGRVLDIPSYQCKTGDIISIRESKQSRRLAETNLEFPGLANVPPHLEFDKTKLRG-- 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI S ++ + + LVVE+YSR Sbjct: 176 -RISSRIEREWVALEINELLVVEYYSR 201 >gi|225016258|ref|ZP_03705450.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum DSM 5476] gi|224950933|gb|EEG32142.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum DSM 5476] Length = 208 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G+ L+ + K V+ RSY PG HGQ RK Y GLQLR Sbjct: 1 MARYTGAVCRLCRREGKKLFLKGERCFSDKCSVSLRSYAPGQHGQSRKKVSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ K+YY ++SE +F F+ A+R G T NL+ LESRLD IVYRA F + ARQ Sbjct: 60 KQMAKRYY-NVSENQFYKYFEMAERKPGMTGENLLKILESRLDNIVYRAGFASSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NG+ VNI S K GDVIEV + S+ + + + R VP ++ VN D Sbjct: 119 LVLHNHFRLNGKKVNICSLLVKPGDVIEVTEASRSNDKMKAVVETWSARPVPMWMDVNKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M R P+ + + + +L+VE YS+ Sbjct: 179 GMTVKMDRYPNRDE---IDLEVAEHLIVELYSK 208 >gi|313683416|ref|YP_004061154.1| SSU ribosomal protein s4p [Sulfuricurvum kujiense DSM 16994] gi|313156276|gb|ADR34954.1| SSU ribosomal protein S4P [Sulfuricurvum kujiense DSM 16994] Length = 208 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS ++ R YGPG HGQ R++K S +G QLR Sbjct: 1 MARYRGPVEKIERRFGVSLGLKGERRLAGKSALDKRPYGPGQHGQ-RRTKISEYGTQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+ RS+F EA R G+T NL+ LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-LSEKQMRSLFGEAKRRTGNTGTNLVMLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 VNH HVLV+G+ V+I SYR K G +E+ +KSK+ ++ A +L + + ++ ++ D Sbjct: 119 LVNHGHVLVDGKRVDIPSYRVKPGQKVEIHEKSKKNNQIVRAIELTNQTGLAAWVDIDQD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + V + ++ L+VE YS+ Sbjct: 179 KAFGIFTRLPEREEVV---IPVEERLIVELYSK 208 >gi|150020872|ref|YP_001306226.1| 30S ribosomal protein S4 [Thermosipho melanesiensis BI429] gi|172048669|sp|A6LLP0|RS4_THEM4 RecName: Full=30S ribosomal protein S4 gi|149793393|gb|ABR30841.1| RNA-binding S4 domain protein [Thermosipho melanesiensis BI429] Length = 209 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K + R + PG HG+ +K Y G+QLRA Sbjct: 1 MARYTGPQCKLCRREGMKLYLKGERCFTDKCAFDRRPFAPGDHGREKKKLTQY-GIQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ MK+ YG + E +FR +++A + GDT NL+ +E RLD +VYR F ARQ Sbjct: 60 KQTMKRIYGVL-EAQFRRYYEKAAKKSGDTRENLVVQVERRLDNVVYRLGFAVNRTTARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V+H H LVNG+ VNI SY+ + GDVIEV++KSK + + A +L +++ ++SV+ + Sbjct: 119 LVSHGHFLVNGKKVNIPSYQVRPGDVIEVREKSKDILPIKNAIELNKDKNRMPWLSVDFE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N + R P + + PV + ++E YSR Sbjct: 179 NYKGVYERHPKLEEVIDLPVDV--QAIIELYSR 209 >gi|305679764|ref|ZP_07402574.1| ribosomal protein S4 [Corynebacterium matruchotii ATCC 14266] gi|305660384|gb|EFM49881.1| ribosomal protein S4 [Corynebacterium matruchotii ATCC 14266] Length = 203 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 9/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G K + R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPVTRKSRRLRVDLVGGSK-AYDKRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LE+RLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-EKQFRRYYAEANRMPGKTGENLVILLEARLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---AERDVPEYISVNHDNMVA 177 LVNG+ VN+ SYR + D+I+V+ KS + EA++ A++ +P ++ V + Sbjct: 118 FLVNGKKVNVPSYRVSQYDIIDVRDKSHTMLWFEEATENLVDADKVIPAWLQVVPSTLRI 177 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 LVHQLPERAQ---IDVPLQEQLIVELYSK 203 >gi|225020483|ref|ZP_03709675.1| hypothetical protein CORMATOL_00490 [Corynebacterium matruchotii ATCC 33806] gi|224946872|gb|EEG28081.1| hypothetical protein CORMATOL_00490 [Corynebacterium matruchotii ATCC 33806] Length = 203 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 9/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G K + R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPVTRKSRRLRVDLVGGSK-AYDKRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LE+RLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-EKQFRRYYAEANRMPGKTGENLVILLEARLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---AERDVPEYISVNHDNMVA 177 LVNG+ VN+ SYR + D+I+V+ KS+ + EA++ A++ +P ++ V + Sbjct: 118 FLVNGKKVNVPSYRVSQYDIIDVRDKSRTMLWFEEATENLVDADKVIPAWLQVVPSTLRI 177 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 LVHQLPERAQ---IDVPLQEQLIVELYSK 203 >gi|217077309|ref|YP_002335027.1| 30S ribosomal protein S4 [Thermosipho africanus TCF52B] gi|226695088|sp|B7IHX2|RS4_THEAB RecName: Full=30S ribosomal protein S4 gi|217037164|gb|ACJ75686.1| ribosomal protein S4 [Thermosipho africanus TCF52B] Length = 209 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR G L+ + K + R + PG HG+ +K Y G+QLRA Sbjct: 1 MARYTGPQCKLCRREGMKLYLKGERCFTDKCAFDRRPFAPGDHGRDKKKLTQY-GIQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ MK+ YG + E +FR ++ A R GDT NL+ +E RLD +VYR F ARQ Sbjct: 60 KQTMKRIYGVL-ETQFRRYYETASRKSGDTRENLVVQVERRLDNVVYRLGFAVNRTTARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 VNH HVLVNGR V I SY+ + GDVIE+++KS+ + V A +L +++ +++V+++ Sbjct: 119 LVNHGHVLVNGRKVTIPSYQVRPGDVIEIREKSRDILPVKNAIELNKDKNTMPWLTVDYE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N T+ R P + + PV + ++E YSR Sbjct: 179 NYKGTYERNPKLEEVIDLPVDV--QAIIELYSR 209 >gi|284040595|ref|YP_003390525.1| ribosomal protein S4 [Spirosoma linguale DSM 74] gi|283819888|gb|ADB41726.1| ribosomal protein S4 [Spirosoma linguale DSM 74] Length = 201 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 112/206 (54%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE + G K + ++YGPG+HG+ RK K S + LQL KQK+K Sbjct: 1 MARYTGPKAKISRKFGEPIMGPSK-ALQKKNYGPGMHGRGRKRKQSEYALQLLEKQKVKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I E++FR++F A G T NL+ E+RLD VYR + AARQ V+H+H Sbjct: 60 TYG-ILERQFRALFHRAQVREGITGENLLKLCEARLDNTVYRLGIASSRRAARQLVSHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G VNI SY K G +I V++KSK L +V + ++ + +V F+ Sbjct: 119 IIVDGEVVNIPSYSLKPGQLIGVREKSKSLEAVSSSLSARNTKRYNWVEWDGQQLVGKFI 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + P +VE YS+ Sbjct: 179 SYPERDQ---IPENFNEQAIVELYSK 201 >gi|238855293|ref|ZP_04645612.1| ribosomal protein S4 [Lactobacillus jensenii 269-3] gi|256850911|ref|ZP_05556300.1| ribosomal protein S4 [Lactobacillus jensenii 27-2-CHN] gi|260661125|ref|ZP_05862039.1| ribosomal protein S4 [Lactobacillus jensenii 115-3-CHN] gi|260664651|ref|ZP_05865503.1| ribosomal protein S4 [Lactobacillus jensenii SJ-7A-US] gi|282932414|ref|ZP_06337839.1| ribosomal protein S4 [Lactobacillus jensenii 208-1] gi|282934177|ref|ZP_06339455.1| ribosomal protein S4 [Lactobacillus jensenii 208-1] gi|313471896|ref|ZP_07812388.1| ribosomal protein S4 [Lactobacillus jensenii 1153] gi|238832185|gb|EEQ24503.1| ribosomal protein S4 [Lactobacillus jensenii 269-3] gi|239529185|gb|EEQ68186.1| ribosomal protein S4 [Lactobacillus jensenii 1153] gi|256615973|gb|EEU21161.1| ribosomal protein S4 [Lactobacillus jensenii 27-2-CHN] gi|260548062|gb|EEX24038.1| ribosomal protein S4 [Lactobacillus jensenii 115-3-CHN] gi|260561716|gb|EEX27688.1| ribosomal protein S4 [Lactobacillus jensenii SJ-7A-US] gi|281301791|gb|EFA94057.1| ribosomal protein S4 [Lactobacillus jensenii 208-1] gi|281303363|gb|EFA95540.1| ribosomal protein S4 [Lactobacillus jensenii 208-1] Length = 203 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGEHGPNNRGRLSEYGMQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++FR++F A + R + N + LE RLD IVYR T ARQ VNH Sbjct: 60 MFG-LNERQFRNLFNRAGKIRQGEHGTNFMVLLERRLDNIVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY K G I +K+KSK L V +A + A P ++S + + + + Sbjct: 119 HILVDGKRVDIPSYEVKVGQEISLKEKSKNLQQVKDALE-AVVSRPSFVSFDENKLTGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EINEALVVEYYNK 201 >gi|87125591|ref|ZP_01081436.1| 30S ribosomal protein S4 [Synechococcus sp. RS9917] gi|86166891|gb|EAQ68153.1| 30S ribosomal protein S4 [Synechococcus sp. RS9917] Length = 202 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++++ + +VP ++ ++ + A Sbjct: 117 VAVNGRVTDIASYQCKAGDVITIRERKGSKKLAEGNLEFPGLANVPPHLELDKTKLSAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 I---GRCEREWVALEINELLVVEYYSR 200 >gi|77165764|ref|YP_344289.1| ribosomal protein S4 [Nitrosococcus oceani ATCC 19707] gi|254433943|ref|ZP_05047451.1| ribosomal protein S4 [Nitrosococcus oceani AFC27] gi|90101699|sp|Q3J8T7|RS4_NITOC RecName: Full=30S ribosomal protein S4 gi|76884078|gb|ABA58759.1| SSU ribosomal protein S4P [Nitrosococcus oceani ATCC 19707] gi|207090276|gb|EDZ67547.1| ribosomal protein S4 [Nitrosococcus oceani AFC27] Length = 208 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQ-RRKSKPSYFGLQLRAK 55 M+K K K RR G +L+ + P++++ PG HG R+++ S + LQLR K Sbjct: 1 MAKYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGARRARMSDYALQLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+++ YG + E++FR +KEA R +G T NL+ LESRLD +VYR F T ARQ Sbjct: 61 QKLRRMYGVL-ERQFRRYYKEAARRKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDN 174 +NH+ VLVNG+ +NI SY+ + DV+ V++K+K+ + A +LA+ R E+I +N Sbjct: 120 INHKGVLVNGQGINIPSYQVRAEDVVAVREKAKRQDRIKFALELAQARAEAEWIEINAGK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + P +Q NLVVE YS+ Sbjct: 180 LEGVFKRVPERSELAP---DIQENLVVELYSK 208 >gi|260893345|ref|YP_003239442.1| ribosomal protein S4 [Ammonifex degensii KC4] gi|260865486|gb|ACX52592.1| ribosomal protein S4 [Ammonifex degensii KC4] Length = 208 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K + R+Y PG HG+ R+ Y +QLR Sbjct: 1 MARYTGPRCRLCRREGIKLYLKGDRCYTSKCALERRNYPPGQHGRVRRKMTEY-AMQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E +FR+ F +A+R +G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKAKRIYGVL-EAQFRNYFAQAERQKGLTGENLLRLLERRLDNVVYRLGMAASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+LVNGR V+I SY + GD I +SK+ + E + A+ + P ++ + + Sbjct: 119 LVRHGHILVNGRRVDIPSYLVEVGDKISFDPRSKESPRIQELLERAAQNNPPPWLRYDPN 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + P+ + V ++ +L+VE YSR Sbjct: 179 EAIGEVLAFPTRDQ---IDVPVKEHLIVELYSR 208 >gi|229823967|ref|ZP_04450036.1| hypothetical protein GCWU000282_01271 [Catonella morbi ATCC 51271] gi|229786321|gb|EEP22435.1| hypothetical protein GCWU000282_01271 [Catonella morbi ATCC 51271] Length = 202 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L K + R+Y PG HG +RK Y GLQL+ KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGISLSETGKE-LARRNYAPGQHGNQRKKISEY-GLQLQEKQKLRH 58 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F++A + + N ++ LE+RLD +VYR F T ARQ VNH Sbjct: 59 TYG-MNERQFATLFRKAGKIKTGKHGENFMALLETRLDNLVYRLGFATTRRQARQLVNHG 117 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV V+G+ V+I SY G VI +++ S+ LA + EA + + +++S + T Sbjct: 118 HVTVDGKRVDIPSYLVTPGQVIGLRESSRDLAIIKEALENTVSRL-DFVSYDAAAFEGTL 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVE+Y++ Sbjct: 177 TRLPERSE---LNAEIDEALVVEYYNK 200 >gi|28212155|ref|NP_783099.1| 30S ribosomal protein S4 [Clostridium tetani E88] gi|41017837|sp|Q890Q9|RS4_CLOTE RecName: Full=30S ribosomal protein S4 gi|28204599|gb|AAO37036.1| SSU ribosomal protein S4P [Clostridium tetani E88] Length = 206 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K + R Y PG HGQ RK K S +GLQLR Sbjct: 1 MARYTEANCRLCRREGLKLYLKGDRCYTDKCAFSRRGYAPGQHGQSRK-KISNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + EK+FR+ +K AD++RG T NL+ LE RLD +VYR + + +RQ Sbjct: 60 KQKAKRIYGVL-EKQFRTYYKRADKARGITGENLLVLLEMRLDNVVYRLGYGDSRKESRQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ VNI S+ DVI V +KS+ + R +P ++ N +N Sbjct: 119 LVTHGHFLVNGKKVNIPSFNVSVNDVITVSEKSRATEKFKTFIENP-RTLPNWLEGNLEN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V PS +D+ PV L+VE YS+ Sbjct: 178 FEGKVVSQPSR-EDIDVPV--NETLIVELYSK 206 >gi|315640101|ref|ZP_07895224.1| 30S ribosomal protein S4 [Enterococcus italicus DSM 15952] gi|315484148|gb|EFU74621.1| 30S ribosomal protein S4 [Enterococcus italicus DSM 15952] Length = 203 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYAPGQHGPNSRGSRSEYGQQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFRTLFVKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY G VI V++KS+ L V EA + + P ++S + + + + Sbjct: 119 HITVDGKRVDIPSYHVDLGQVIGVREKSQNLTIVKEAVE-STVGRPAFVSFDDEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + P + L+VEFY Sbjct: 178 SRLPERDELYP---DIDEALIVEFY 199 >gi|294055197|ref|YP_003548855.1| ribosomal protein S4 [Coraliomargarita akajimensis DSM 45221] gi|293614530|gb|ADE54685.1| ribosomal protein S4 [Coraliomargarita akajimensis DSM 45221] Length = 202 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 120/207 (57%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ +I+RR G+ ++ K + + PG HG R + K S + + L KQK++ Sbjct: 1 MARYTGPTTRINRRFGQAIFAPTK-AFERKPHPPGQHGPRLRRKLSDYAIGLNEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+FR F++A RG T + LE RLD++VYR F + AARQFV+H H Sbjct: 60 MYG-MTEKQFRLTFEKAKNQRGVTGEIFLQMLECRLDSVVYRLGFAKSRSAARQFVSHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ +I S+ KEGD IEV++++ + + R VPE++++N D++ AT Sbjct: 119 VCVNGKKTDIASFMVKEGDEIEVRERTSSRQLATRGMEESTARTVPEWVTLNSDSLKATV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+PS+ + + L+VE+YSR Sbjct: 179 NRLPSNEETE---AGINVQLIVEYYSR 202 >gi|328463108|gb|EGF34871.1| 30S ribosomal protein S4 [Lactobacillus rhamnosus MTCC 5462] Length = 203 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G +L G K + R Y PG HG + K S +G QLR KQK++ Sbjct: 1 MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F+++F A + + T N + LE+RLD +V+R + ARQ VNH Sbjct: 60 MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ ++I SY + G VI ++++S+ LA V EA + P Y++ + + + Sbjct: 119 HITVDGKRLDIPSYEVQLGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + P + +LVVE+Y Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199 >gi|307720212|ref|YP_003891352.1| 30S ribosomal protein S4P [Sulfurimonas autotrophica DSM 16294] gi|306978305|gb|ADN08340.1| SSU ribosomal protein S4P [Sulfurimonas autotrophica DSM 16294] Length = 208 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS + R YGPG HGQRRK Y GLQL Sbjct: 1 MARYRGPVEKIERRFGVSLNLKGERRLAGKSALEKRPYGPGQHGQRRKKVSEY-GLQLNE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FR++F EA R G+T NLI+ +E RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-ISEKQFRALFVEAKRRDGNTGTNLITLIEQRLDNVVYRMGFASTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G+ ++I SYR K G IEVK+ SK V+ A +L + + ++ ++ + Sbjct: 119 LVTHGHILVDGKKLDIPSYRVKPGQKIEVKEASKANNQVVRAIELTNQTGLAPWVDIDAE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + V + ++ L+VE YS+ Sbjct: 179 KVYGIFTRLPEREEVV---IPVEERLIVELYSK 208 >gi|312144221|ref|YP_003995667.1| ribosomal protein S4 [Halanaerobium sp. 'sapolanicus'] gi|311904872|gb|ADQ15313.1| ribosomal protein S4 [Halanaerobium sp. 'sapolanicus'] Length = 208 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S K+ RR GE L+ + K + R Y PG HGQ R K S +GLQLR Sbjct: 1 MARYTGSVCKLCRREGEKLYLKGARCYSKKCSFDRRPYVPGEHGQGR-HKVSEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I EK+F + FK A+ + G T N + LE RLD +VYR F + ARQ Sbjct: 60 KQKVRRIYG-IMEKQFSNYFKSAENTAGVTGENFLQLLERRLDNVVYRMGFASSRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 FV H H+ VNGR V+I SY+ DV+ VK S++ E + ++ E+I+ + + Sbjct: 119 FVLHGHIKVNGRKVDIPSYQVDVDDVVSVKDSSRKSKRFKEVFEYNSDFATQEWINSDLE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T V +P +D+ YPV + +L+VE+YSR Sbjct: 179 KAEGTVVALPER-EDIDYPV--EEHLIVEYYSR 208 >gi|291334081|gb|ADD93754.1| ribosomal protein S4 [uncultured marine bacterium MedDCM-OCT-S05-C114] Length = 202 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I+RR G ++ K R+Y PG HG + K S +G L KQK++ Sbjct: 1 MSRYTGPTTRINRRFGMAIFPANK-AFERRTYPPGQHGPTYRRKVSDYGEGLLEKQKLRM 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++EK+FR++F++A R +G T N ++FLE+RLD +VYR F T AARQ+VNH H Sbjct: 60 LYC-LTEKQFRNLFEKAKRKQGVTGENFLTFLETRLDNVVYRLGFAKTRKAARQYVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNG+ V+I S+ GD I V++K+ + + P ++ VN D++ T Sbjct: 119 ILVNGKKVDIPSFAVSVGDEIGVREKTSSRQLATRNLEGTQYHPSPPWVDVNADSLQGTV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + + LVVEFYSR Sbjct: 179 SRFPQNDE---LEQSINVQLVVEFYSR 202 >gi|182412027|ref|YP_001817093.1| ribosomal protein S4 [Opitutus terrae PB90-1] gi|226699097|sp|B1ZNC4|RS4_OPITP RecName: Full=30S ribosomal protein S4 gi|177839241|gb|ACB73493.1| ribosomal protein S4 [Opitutus terrae PB90-1] Length = 203 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++ RR G+ + G K RSY PG HG + + K S + + L KQK++ Sbjct: 1 MARYTGPTTRVSRRFGQQILGSGK-AFERRSYPPGQHGPKLRRKVSEYAVGLNEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR +F+ A + RG T + LE+RLD++VY + AARQFVNH H Sbjct: 60 IYG-LLERQFRRVFEIAKKERGVTGERFLQLLETRLDSVVYLLGLAKSRAAARQFVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNG V+I SY K GD IEVK + R+VP ++S+N + AT Sbjct: 119 IRVNGHKVDIASYNVKAGDEIEVKNSPASRQLATRCLEENRIRNVPGWLSMNAETFKATV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ + + L+VEFYSR Sbjct: 179 NRLPTRDEMEQ---GINEQLIVEFYSR 202 >gi|325981829|ref|YP_004294231.1| 30S ribosomal protein S4 [Nitrosomonas sp. AL212] gi|325531348|gb|ADZ26069.1| ribosomal protein S4 [Nitrosomonas sp. AL212] Length = 208 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K K K RR GE L+ + K + R+Y PG HGQ +K + S +G QLR Sbjct: 1 MAKNLEPKCKQCRREGEKLFLKGGKCFTDKCAIERRNYPPGQHGQ-KKGRTSDYGGQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG I EK+FR+I+K AD+ RG T NL+ LE RLD + + F + ARQ Sbjct: 60 KQKIRRIYG-ILEKQFRNIYKVADKQRGITGDNLLQLLEGRLDNVAFHMGFGASRSEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H +L+NG VNI SYR K GD +EV +K+K+ + A ++A R+ +I V+ Sbjct: 119 IVRHNGILINGSRVNIPSYRVKAGDTVEVAEKAKEQLRIKNALEMANNRNFATWIEVDTK 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M F P P + +L+VE YS+ Sbjct: 179 AMKGIFKTKPERSD---LPATINESLIVELYSK 208 >gi|116493045|ref|YP_804780.1| 30S ribosomal protein S4 [Pediococcus pentosaceus ATCC 25745] gi|122265491|sp|Q03EN4|RS4_PEDPA RecName: Full=30S ribosomal protein S4 gi|116103195|gb|ABJ68338.1| SSU ribosomal protein S4P [Pediococcus pentosaceus ATCC 25745] Length = 202 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HGQ + K S +G+QLR KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLTGTGKE-LARRPYAPGDHGQNNRRKISEYGMQLREKQKLRM 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-LTERQFSNLFVRAGKIREGLPGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY + G VI V++KSK L + EA + A P+++ + D + + Sbjct: 119 HITVDGKRVDIPSYEVEIGQVIGVREKSKDLKIISEAVE-AVVGRPQFVQFDADKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + + +L+VE+Y++ Sbjct: 178 VRLPQRDE---LEADIDDSLIVEYYNK 201 >gi|95930497|ref|ZP_01313233.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684] gi|95133537|gb|EAT15200.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684] Length = 206 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K ++K KI RR+G N++G PK + R PG HG R+ KPS + QL KQK+ Sbjct: 1 MAKNFTAKGKIVRRLGVNIYGNPKYDRLLERRPTPPGEHGAGRRGKPSDYSRQLTEKQKV 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SEK+FR +F +A +G T HN++ LE RLD +V+R T AR FV H Sbjct: 61 RFCYG-LSEKQFRRVFDKAKAMKGVTGHNMLVLLERRLDNMVFRLGLASTRSEARLFVRH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVA 177 H LVNGR V+I SY + GDVIEV++KS+++ + EA R +P ++ + D Sbjct: 120 GHFLVNGRKVDIPSYLVRAGDVIEVREKSRKIGKISEALDSVMRRGIPSWLELERDAFKG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P+ +++ PV + L+VE YS+ Sbjct: 180 TVKSLPAR-EELTTPV-FEEQLIVELYSK 206 >gi|302390984|ref|YP_003826804.1| 30S ribosomal protein S4P [Acetohalobium arabaticum DSM 5501] gi|302203061|gb|ADL11739.1| SSU ribosomal protein S4P [Acetohalobium arabaticum DSM 5501] Length = 208 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR GE L+ + K + R Y PG G +R K S FG+QLR Sbjct: 1 MARDTKAVCRKCRREGEKLFLKGERCFSDKCAIERRPYAPGEQGNKR-QKLSEFGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG +SE +F+ F+ AD G T N + LESRLD IVYR F + ARQ Sbjct: 60 KQKVRQIYG-VSESQFKKYFEMADNKPGITGENFLKILESRLDNIVYRLGFAASRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H LVNG V+I SY +EGD +EVK SK + + E + ++++P ++ N + Sbjct: 119 LVRHGHFLVNGERVDIPSYLVEEGDEVEVKDSSKDMKRMQEIVEFTGQQNIPAWVEANLE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N ++ P +D+ PV L+VEFYSR Sbjct: 179 NKTGKVLKEPER-EDIDLPVR--EQLIVEFYSR 208 >gi|328957152|ref|YP_004374538.1| 30S ribosomal protein S4 [Carnobacterium sp. 17-4] gi|328673476|gb|AEB29522.1| 30S ribosomal protein S4 [Carnobacterium sp. 17-4] Length = 201 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + K + +GLQL+ KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLSGTGKE-IERRPYAPGPHGPNSRKKLTEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++F ++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MFG-MNERQFSNLFLKAGKIKEGKHGENFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY G VI V++KSK + + A++ A P+Y++ + + + ++ Sbjct: 119 HILVDGKRVDIPSYSVSVGQVITVREKSKNMDIIKSAAE-ALFGRPDYVTFDVEKLEGSY 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + ++VE+YSR Sbjct: 178 NRLPLRDE---LSAEIDETIIVEYYSR 201 >gi|72383580|ref|YP_292935.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. NATL2A] gi|90101705|sp|Q46LZ9|RS4_PROMT RecName: Full=30S ribosomal protein S4 gi|72003430|gb|AAZ59232.1| SSU ribosomal protein S4P [Prochlorococcus marinus str. NATL2A] Length = 202 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RS+ PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSHPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE+RLD + +R F PTI +RQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++ + +VP ++ ++ + A Sbjct: 117 VTVNGRITDIASYQCKAGDVIAIRDNKASKQLAQANLEFPGLANVPPHLELDKTKLSAKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 SA---KTDREWVAIEINELLVVEYYSR 200 >gi|330470145|ref|YP_004407888.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032] gi|328813116|gb|AEB47288.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032] Length = 208 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + PK P +R + PG HG+ R + Y LQLR Sbjct: 1 MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR ++EA + T L+ LESRLD +VYRA + + ARQ Sbjct: 60 KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H VNG+ V+I SYR D+IEV+ KSK+L + A ++ + VP ++ Sbjct: 119 LVKHGHFTVNGKKVDIPSYRVSAHDIIEVRAKSKELTPFIVAQAEAGSKTVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ +Q L+VE YS+ Sbjct: 179 QMKVLVHSLPARQ---VIDTQVQEQLIVELYSK 208 >gi|148238927|ref|YP_001224314.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7803] gi|172047783|sp|A5GJA2|RS4_SYNPW RecName: Full=30S ribosomal protein S4 gi|147847466|emb|CAK23017.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7803] Length = 202 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++++ + +VP ++ ++ + A Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKQLAEGNLEFPGLANVPPHLELDKPKLNAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V + + + LVVE+YSR Sbjct: 177 V---GRCEREWVALEINELLVVEYYSR 200 >gi|254458831|ref|ZP_05072255.1| ribosomal protein S4 [Campylobacterales bacterium GD 1] gi|207084597|gb|EDZ61885.1| ribosomal protein S4 [Campylobacterales bacterium GD 1] Length = 208 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS + R YGPG HGQRRK Y GLQL Sbjct: 1 MARYRGPVEKIERRFGVSLNLKGERRLAGKSALEKRPYGPGQHGQRRKKVSEY-GLQLNE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR++F EA R G+T NLI+ +ESRLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRALFVEAKRREGNTGTNLITLIESRLDNVVYRMGFASTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G+ ++I SYR K G IEV++ SK+ ++ A +L + + ++ ++ D Sbjct: 119 LVTHGHLLVDGKKLDIPSYRVKPGQKIEVRESSKKNNQIVRAMELTNQTGLAPWVDIDAD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + V + ++ L+VE YS+ Sbjct: 179 KVFGIFTRLPEREEVV---IPVEERLIVELYSK 208 >gi|237786335|ref|YP_002907040.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385] gi|259495271|sp|C4LKZ2|RS4_CORK4 RecName: Full=30S ribosomal protein S4 gi|237759247|gb|ACR18497.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385] Length = 201 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVG-GDANFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR + EA R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-IMEKQFRRYYAEAHRRPGKTGDNLMVLLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ VN+ S++ + D+I+V++KS+++ EA + LA+ VP ++ V + Sbjct: 118 FTVNGKKVNVPSFQVSQYDIIDVREKSRKMVWFDEAQEALADAVVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IEVPIQEQLIVEFYSK 201 >gi|71065083|ref|YP_263810.1| 30S ribosomal protein S4 [Psychrobacter arcticus 273-4] gi|90101710|sp|Q4FUD2|RS4_PSYA2 RecName: Full=30S ribosomal protein S4 gi|71038068|gb|AAZ18376.1| SSU ribosomal protein S4P [Psychrobacter arcticus 273-4] Length = 213 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 17/218 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPV-----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + + PG HG R Y LQLR K Sbjct: 1 MARYIGPKLKLSRREGTDLGLKSGVKPYDVKTKKSARPPGQHGVSRNKSSEY-SLQLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K+ YG + E++F + +KEA R RG T NL++ LESRLD +VYR F T ARQ Sbjct: 60 QKVKRIYGVL-ERQFANYYKEAARKRGATGENLLAMLESRLDNVVYRMGFGSTRAEARQL 118 Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168 V+HR V+V VNI S + ++GDVI +++KS++ + A +LA +R +PE++ Sbjct: 119 VSHRTVMVKKAGRDEFVRVNIPSIQLQDGDVIAIQEKSREQLRIKNAIELATQRGIPEWL 178 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+H + TF + P + P + +L+VE YS+ Sbjct: 179 DVDHSKLQGTFKKAPDR---IDLPAEINESLIVELYSK 213 >gi|226227380|ref|YP_002761486.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27] gi|226090571|dbj|BAH39016.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27] Length = 211 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 13/215 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQR--RKSKPSYFGLQL 52 M++ + RR G L+ + K ++ R Y PG HGQ R+ K S + QL Sbjct: 1 MARYTGPSCRQCRREGAKLFLKGTKCFTEKCAIDRRPYAPGQHGQATARRKKMSEYAKQL 60 Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 R KQK+K+ YG +SEK+FR+ F + G T HNL++ LE+RLD +V+R F P+ AA Sbjct: 61 REKQKIKRIYG-VSEKQFRNTFDKVATQAGITGHNLVAALETRLDNVVFRMGFAPSRKAA 119 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVN 171 RQ + HRH+ V GR ++I SY + G+ + VKQ S++L V A + A R +I+V+ Sbjct: 120 RQLIRHRHIEVKGRQLDIPSYAVRPGEEVRVKQSSRELVLVQGAMEQASRGASLSWIAVD 179 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + P P+ Q LVVE YS+ Sbjct: 180 KESFSGRVLEKPQRQA---VPLAAQEQLVVELYSK 211 >gi|15617094|ref|NP_240307.1| 30S ribosomal protein S4 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681846|ref|YP_002468232.1| 30S ribosomal protein S4 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682401|ref|YP_002468785.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471551|ref|ZP_05635550.1| 30S ribosomal protein S4 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387058|sp|P57567|RS4_BUCAI RecName: Full=30S ribosomal protein S4 gi|254764574|sp|B8D9S3|RS4_BUCA5 RecName: Full=30S ribosomal protein S4 gi|254764575|sp|B8D825|RS4_BUCAT RecName: Full=30S ribosomal protein S4 gi|25294492|pir||A84988 30S ribosomal protein S4 [imported] - Buchnera sp. (strain APS) gi|10039159|dbj|BAB13193.1| 30S ribosomal protein S4 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622134|gb|ACL30290.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624689|gb|ACL30844.1| 30S ribosomal protein S4 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086222|gb|ADP66304.1| 30S ribosomal protein S4 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086799|gb|ADP66880.1| 30S ribosomal protein S4 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087386|gb|ADP67466.1| 30S ribosomal protein S4 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087883|gb|ADP67962.1| 30S ribosomal protein S4 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 206 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR G +L+ + + ++ PG HG RK + S + +QLR KQ Sbjct: 1 MAKYLGPKLKLSRREGTDLFLKSGLRSIESKCKLEQPPGQHG-IRKPRLSDYAIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F+ +K A +G+T NL+ LESRLD +VYR F T +RQ + Sbjct: 60 KVRRLYGVL-ERQFKIYYKLAASLKGNTGANLLQLLESRLDNVVYRMGFGCTRSESRQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 NH+ ++VN + VNI SY+ D I ++ KSK + + A +L E R+ P ++ VN M Sbjct: 119 NHKSIMVNNKVVNIASYQVSPNDQISIRNKSKNQSRIKAALELVEQREKPIWLEVNSTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + L+VE YS+ Sbjct: 179 EGIFKRFPERSD---LSAEINEYLIVELYSK 206 >gi|256390172|ref|YP_003111736.1| 30S ribosomal protein S4 [Catenulispora acidiphila DSM 44928] gi|256356398|gb|ACU69895.1| ribosomal protein S4 [Catenulispora acidiphila DSM 44928] Length = 208 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 112/213 (52%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K RR L+ + PK P+ R Y PG HG+ R + Y LQLR Sbjct: 1 MARYTGPDCKRCRREKTKLFLKGSKCDGPKCPIEIRPYPPGEHGRGRTKENEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR ++EA+R G T NL+ LESRLD +VYRA F + ARQ Sbjct: 60 KQKTARIYGVL-EKQFRGYYEEANRKGGKTGENLLRILESRLDNVVYRAGFAKSRDHARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H+L+NG NI S R D++EV+++S +L + A ++ ER VP +I V Sbjct: 119 LVRHGHILINGHKANIPSMRVTPSDIVEVRKESLELTPFVVARAEAGERAVPAWIEVIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P +Q L+VE YS+ Sbjct: 179 KMRILVHSLPERA---VIDTQVQEQLIVELYSK 208 >gi|317970558|ref|ZP_07971948.1| 30S ribosomal protein S4 [Synechococcus sp. CB0205] Length = 202 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KS RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKSA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR V+I SY+CK GDV+ ++++ + + ++P ++ ++ + VA Sbjct: 117 VTVNGRVVDIASYQCKAGDVVAIRERKQSKKLAEANLEFPGLANIPPHLELDKNKQVAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 IS---KCEREWVALEINELLVVEYYSR 200 >gi|238061095|ref|ZP_04605804.1| 30S ribosomal protein S4 [Micromonospora sp. ATCC 39149] gi|237882906|gb|EEP71734.1| 30S ribosomal protein S4 [Micromonospora sp. ATCC 39149] Length = 208 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + PK P +R + PG HG+ R + Y LQLR Sbjct: 1 MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR ++EA + T L+ LESRLD +VYRA + + ARQ Sbjct: 60 KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H VNG+ V+I SYR KE D+IEV+ KSK+L + A ++ R VP ++ Sbjct: 119 LVKHGHFTVNGKKVDIPSYRVKEHDIIEVRGKSKELTPFIVAQAEAGSRTVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ +Q L+VE YS+ Sbjct: 179 QMKVLVHSLPARQ---VIDTQVQEQLIVELYSK 208 >gi|78357275|ref|YP_388724.1| 30S ribosomal protein S4 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|90101689|sp|Q30Z67|RS4_DESDG RecName: Full=30S ribosomal protein S4 gi|78219680|gb|ABB39029.1| SSU ribosomal protein S4P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 208 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K SK +I RR G L+ + K + R Y PG HG+ RK Y +QLR Sbjct: 1 MAKYNDSKCRICRREGGKLFLKGDRCYTDKCAFDRRPYAPGQHGRARKKNSDY-AVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+F S F +AD S+G T NL+S LE RLD ++YR F + ARQ Sbjct: 60 KQKVRRMYG-LLEKQFHSYFVKADMSKGVTGSNLLSILERRLDNVIYRLGFANSRSQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H VNGR I S + K GDVIEV++K++++ + EA + +A R P ++ + Sbjct: 119 MVRHGIFTVNGRKATIPSIQVKVGDVIEVREKNRKMPVIAEAQEVIARRGCPSWLEADGP 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +P +D+ +P M L+VE YS+ Sbjct: 179 NFRGVVKALPQR-EDIQFP--MSEQLIVELYSK 208 >gi|237752998|ref|ZP_04583478.1| 30s ribosomal protein s4 [Helicobacter winghamensis ATCC BAA-430] gi|229375265|gb|EEO25356.1| 30s ribosomal protein s4 [Helicobacter winghamensis ATCC BAA-430] Length = 208 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS ++ R YGPG HGQRR Y G+QLR Sbjct: 1 MARYRGPVEKIERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQRRGKISEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG +SEK+FR+IF EA+R G+T NL+ +E RLD +VYR F T ARQ Sbjct: 60 KQKARMMYG-VSEKQFRAIFVEANRLEGNTGENLVKLIERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G+ ++I S G +E+ +K+K+ V A +L + + ++ V+ D Sbjct: 119 LVVHGHILVDGKKLDIPSALVGVGQKVEICEKTKKNPQVQRAIELTKQTGIAPWVDVDQD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + V + ++ L+VE YS+ Sbjct: 179 KVFGIFTRLPEREEVV---IPIEEKLIVELYSK 208 >gi|117927542|ref|YP_872093.1| SSU ribosomal protein S4P [Acidothermus cellulolyticus 11B] gi|152060925|sp|A0LRP7|RS4_ACIC1 RecName: Full=30S ribosomal protein S4 gi|117648005|gb|ABK52107.1| SSU ribosomal protein S4P [Acidothermus cellulolyticus 11B] Length = 208 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR L+ + PK P+ R Y PG HG+ R + Y LQLR Sbjct: 1 MARYLGADCKLCRREKMKLFLKGSKCESPKCPIEERPYPPGEHGRTRAKESEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR ++EA R G T NL+ LESRLD +VYRA F + ARQ Sbjct: 60 KQKCARIYGVL-EKQFRRYYEEASRKTGRTGENLLRILESRLDNVVYRAGFAASRDQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H H LVNGR V+I SYR E DVIEV +KS++L + A +A ER VP ++ V + Sbjct: 119 LVRHGHFLVNGRRVDIPSYRVSENDVIEVAEKSRELTPFVIARAVAGERTVPPWLEVIPN 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +PS +Q L+VEFYS+ Sbjct: 179 RLRILVHSLPSRQ---VIDTPVQEQLIVEFYSK 208 >gi|320528307|ref|ZP_08029469.1| ribosomal protein S4 [Solobacterium moorei F0204] gi|320131221|gb|EFW23789.1| ribosomal protein S4 [Solobacterium moorei F0204] Length = 200 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ ++ + R+Y PG HG ++ K +G QLR KQ+++ Sbjct: 1 MARYTGPVWKKARRLSFSI-LETGEELKKRTYAPGQHGPTKRIKLGGYGTQLREKQRIRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F ++F +A + G N + LESRLD IVYR T AARQ VNH H Sbjct: 60 MYG-LNERQFSNLFNKASKMEGMAGVNFLILLESRLDNIVYRMGLARTRKAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ ++I S K I V++ ++ + ++ E+ + A +P ++ V+ +N TFV Sbjct: 119 IEVNGKKLDIPSALIKPESTIAVRENARNIKAIAESLESA-ITIPAFVEVDKENKKGTFV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +LVVEFY+R Sbjct: 178 RLPERSE---LNQEINESLVVEFYNR 200 >gi|93005338|ref|YP_579775.1| 30S ribosomal protein S4 [Psychrobacter cryohalolentis K5] gi|122415887|sp|Q1QDG2|RS4_PSYCK RecName: Full=30S ribosomal protein S4 gi|92393016|gb|ABE74291.1| SSU ribosomal protein S4P [Psychrobacter cryohalolentis K5] Length = 213 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 17/218 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPV-----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + + PG HG R Y LQLR K Sbjct: 1 MARYIGPKLKLSRREGTDLGLKSGVKPYDVKTKKSARPPGQHGVSRNKSSEY-SLQLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K+ YG + E++F + +KEA R RG T NL++ LESRLD +VYR F T ARQ Sbjct: 60 QKVKRIYGVL-ERQFANYYKEAARKRGATGENLLAMLESRLDNVVYRMGFGSTRAEARQL 118 Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168 V+HR V+V VNI S + ++GDVI +++KS++ + A +LA +R +PE++ Sbjct: 119 VSHRTVMVKKAGRDEFIRVNIPSIQLQDGDVIAIQEKSREQLRIKNAIELATQRGIPEWL 178 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+H + TF + P + P + +L+VE YS+ Sbjct: 179 DVDHSKLQGTFKKAPDR---IDLPAEINESLIVELYSK 213 >gi|332178480|gb|AEE14169.1| ribosomal protein S4 [Thermodesulfobium narugense DSM 14796] Length = 208 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 114/212 (53%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS+ ++ RR G L+ + K + R PG+H R Y GL+LR Sbjct: 1 MSRYTGPVCRLCRREGMKLFLKGDRCLSEKCSFDKRPTPPGMHINTRTKTSEY-GLRLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQKMK++YG I E++FR + A++ G T NL LE RLD ++YR+ F + ARQ Sbjct: 60 KQKMKRFYGLIGERQFRRYVELAEKMGGVTGDNLYFLLERRLDNVLYRSGFASSRQEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 ++H H VN R V+I SY K GDVI V++ SK L S + ER +I V++D Sbjct: 120 MISHGHFNVNSRRVSIPSYSVKPGDVISVRENSKGLFSPEYVEVIKERTPAPWIYVDYDK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + V ++ NL++EFYSR Sbjct: 180 LEIKFDRLPQREE---LDVPIRENLIIEFYSR 208 >gi|260663356|ref|ZP_05864247.1| 30S ribosomal protein S4 [Lactobacillus fermentum 28-3-CHN] gi|260552208|gb|EEX25260.1| 30S ribosomal protein S4 [Lactobacillus fermentum 28-3-CHN] Length = 197 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 7/203 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ RR+G +L G K + R Y PG HG R+ K S +G QLR KQK++ Sbjct: 1 MSRYTGPSWRLSRRLGVSLSGTGKE-LARRPYAPGDHGNDRRGKLSEYGTQLREKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + + T N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MTERQFSNLFVRAGKIKEGTHGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G VI V++KSK L + A + A P Y+ + D + Sbjct: 119 HITVDGKRVDIPSYEVKVGQVIAVREKSKNLDVIKGAVE-AVVARPAYVEFDADKLEGKL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVE 202 R+P + L+VE Sbjct: 178 TRLPQR---EDMNADIDEALIVE 197 >gi|297623301|ref|YP_003704735.1| 30S ribosomal protein S4 [Truepera radiovictrix DSM 17093] gi|297164481|gb|ADI14192.1| ribosomal protein S4 [Truepera radiovictrix DSM 17093] Length = 205 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M ++ K+ RR G NL PK + R Y PG HGQRR K S +G++LR KQK+ Sbjct: 1 MGRQRDPIVKLSRREGVNLAETPKVQKYMERRPYPPGQHGQRRSRKLSDYGVRLREKQKL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 ++ Y ++SEK+F ++F EA R +G T + LESRLD +V+R T ARQFV H Sbjct: 61 RRLY-NLSEKQFSNLFAEAVRQQGATGGVFLQLLESRLDNVVFRLGIAHTRRQARQFVTH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVA 177 RH+LVNG+ V++ SYR + GD I V +S+ + + +R + ++ + +++ Sbjct: 120 RHILVNGKVVDVPSYRVRPGDEIAVAPRSRSNEVIKSNVEARKRGRLSPWLEFDSESLKG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+PS +D+ PV V+E+YSR Sbjct: 180 KFQRLPSR-EDITVPV--NELQVIEYYSR 205 >gi|302869943|ref|YP_003838580.1| 30S ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029] gi|315501404|ref|YP_004080291.1| ribosomal protein s4 [Micromonospora sp. L5] gi|302572802|gb|ADL49004.1| ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029] gi|315408023|gb|ADU06140.1| ribosomal protein S4 [Micromonospora sp. L5] Length = 208 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + PK P +R + PG HG+ R + Y LQLR Sbjct: 1 MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR ++EA T L+ LESRLD +VYRA + + ARQ Sbjct: 60 KQKARRVYGVL-EKQFRGYYEEAVSKEAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173 V H H VNG+ V+I SYR KE D+IEV+ KSK+L L A + R VP ++ Sbjct: 119 LVKHGHFTVNGKKVDIPSYRVKEHDIIEVRAKSKELTPFLVAQGEAGSRTVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ +Q L+VE YS+ Sbjct: 179 QMKILVHSLPARQ---VIDTQVQEQLIVELYSK 208 >gi|108773320|ref|YP_635875.1| ribosomal protein S4 [Oltmannsiellopsis viridis] gi|122195135|sp|Q20EX0|RR4_OLTVI RecName: Full=30S ribosomal protein S4, chloroplastic gi|82541902|gb|ABB81943.1| ribosomal protein S4 [Oltmannsiellopsis viridis] Length = 200 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE S TR+ PG HG +K S +G++L+ KQK++ Sbjct: 1 MSRYRGPRLRIIRRLGELPGFT--SKTTTRTSSPGQHGGSNFAKSSAYGIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E++ S K+A R +G T L+ LE RLD +V+R PT+ AARQ ++H H Sbjct: 59 NYG-ITERQLLSYVKKAKRMKGSTGEVLLQLLEMRLDNVVFRLGMAPTVVAARQLISHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VN + V I SY C+ DVI V+ K+ V EA+ A +VP ++S N +++V Sbjct: 118 IVVNDQKVTIPSYACQVKDVISVRAKNNSRKMVTEANSTATANVPSHLSWNKESLVGVVN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 178 KVIDRKD---VGLQLNELLVVEYYSR 200 >gi|295425094|ref|ZP_06817799.1| 30S ribosomal protein S4 [Lactobacillus amylolyticus DSM 11664] gi|295065153|gb|EFG56056.1| 30S ribosomal protein S4 [Lactobacillus amylolyticus DSM 11664] Length = 203 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGVSLSGTGKE-IARRNYAPGQHGTNSRGRLSEYGEQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD IVYR T ARQ VNH Sbjct: 60 AYG-LNERQFRALFARAGKIREGQHGTNFMILLERRLDNIVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A A P Y++ + + M + Sbjct: 119 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALD-AVTARPSYVAFDDNKMEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + LVVE+Y++ Sbjct: 178 VRLPERDEMDP---NVNEALVVEWYNK 201 >gi|87302988|ref|ZP_01085792.1| 30S ribosomal protein S4 [Synechococcus sp. WH 5701] gi|87282484|gb|EAQ74443.1| 30S ribosomal protein S4 [Synechococcus sp. WH 5701] Length = 202 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ KS R+Y PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKSA--KRAYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE+RLD I +R F PT+ ARQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNICFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNGR V++ SY+C+ GDVI V+++ + ++P + ++ + A Sbjct: 117 ITVNGRVVDVPSYQCRAGDVIVVRERKASRQLAEGNLEFPGLANIPPNLELDKNKFTAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVEFYSR Sbjct: 177 N---GRIEREWVALEINELLVVEFYSR 200 >gi|88809256|ref|ZP_01124765.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7805] gi|88787198|gb|EAR18356.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7805] Length = 202 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++++ Q +VP ++ ++ + A Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKLLAEGNLQFPGLANVPPHLELDKPKLNAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V + + + LVVE+YSR Sbjct: 177 V---GRCEREWVALEINELLVVEYYSR 200 >gi|160871805|ref|ZP_02061937.1| ribosomal protein S4 [Rickettsiella grylli] gi|159120604|gb|EDP45942.1| ribosomal protein S4 [Rickettsiella grylli] Length = 206 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR+G +L + ++++ PG+ ++ + S +G+ LR KQ Sbjct: 1 MARYRGPTCKLARRLGTDLQLKSGIRALDSKCKLATPPGM-QPAKRGRLSEYGVLLRQKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 ++ YG I E++FR + +A + +G T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 LIRHTYG-ILERQFRLYYTKASKRKGITGENLLKLLECRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 +HR V VN VNI SY+ K GDVIE+K+KSK + A +L ++ P +I V+ + Sbjct: 119 SHRAVKVNSTIVNIPSYQVKVGDVIEIKEKSKSQTRIQAAIELTKQKPQPAWIDVDSTQL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F IP + P+ NLVVE+YS+ Sbjct: 179 QGVFKLIPERSE---LPLEFNENLVVEYYSK 206 >gi|134298120|ref|YP_001111616.1| 30S ribosomal protein S4 [Desulfotomaculum reducens MI-1] gi|172044238|sp|A4J138|RS4_DESRM RecName: Full=30S ribosomal protein S4 gi|134050820|gb|ABO48791.1| SSU ribosomal protein S4P [Desulfotomaculum reducens MI-1] Length = 208 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + RR G L+ + K ++ RSY PG HGQ RK Y G+QLRA Sbjct: 1 MARYTGPHCRQCRREGLKLYLKGDRCYTGKCAIDRRSYAPGQHGQGRKKVSEY-GIQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK FR+ F+ A+R G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKARRIYGVL-EKPFRNYFEHAERQPGITGENLLRLLERRLDNVVYRLGLGASRVEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H VNG+ VNI S++ + GD I V++KSK + E + A+R P ++ + Sbjct: 119 LVRHGHFTVNGKKVNIPSFQVRVGDEIAVREKSKASPRIKELVERAADRTTPAWLEYDGQ 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +PS + ++ +L+VE YSR Sbjct: 179 EAKGRVIALPSRDQ---IDAPVEEHLIVELYSR 208 >gi|221632952|ref|YP_002522175.1| 30S ribosomal protein S4 [Thermomicrobium roseum DSM 5159] gi|254764619|sp|B9KZW1|RS4_THERP RecName: Full=30S ribosomal protein S4 gi|221156886|gb|ACM06013.1| ribosomal protein S4 [Thermomicrobium roseum DSM 5159] Length = 217 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 16/219 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTR----SYGPGLHGQRRK--SKPSYF 48 M + ++ RR G L+ + PK P+ R +Y PG HG ++ +PS F Sbjct: 1 MGRYIGPVCRLCRREGVKLYLKGERCFGPKCPIVKRHPNKNYPPGQHGPTQRAARRPSEF 60 Query: 49 GLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108 LQLR KQK+K+ YG I E++FR F EA+R G T NL+ LESRLD +VYR F + Sbjct: 61 ALQLREKQKLKRVYG-ILERQFRRHFDEAERRPGLTGDNLLQILESRLDNVVYRLGFADS 119 Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEY 167 ARQ V H H LVNGR +I SY+ + GD+I V+ +S++ + A+ VP + Sbjct: 120 RRQARQLVRHGHFLVNGRKTDIPSYQVRPGDIIAVRPESRRREYFKVLEETAKNKAVPAW 179 Query: 168 ISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +S + + M +R+P+ + + P + LVVE+YSR Sbjct: 180 LSRDLETMSGRVLRLPTRDE-IDIP-PVNTQLVVEYYSR 216 >gi|114778798|ref|ZP_01453605.1| 30S ribosomal protein S4 [Mariprofundus ferrooxydans PV-1] gi|114550929|gb|EAU53493.1| 30S ribosomal protein S4 [Mariprofundus ferrooxydans PV-1] Length = 209 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ +K ++ RR GE L+ + K P+ R Y PG+HGQ R++K S +GLQLR Sbjct: 1 MARYLEAKCRLCRREGEKLFLKGGKCYSDKCPIERRPYAPGMHGQNRRTKVSDYGLQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR F +ADR G T NL+ LESRLD +VYR + ARQ Sbjct: 61 KQKVKRIYG-LQEKQFRGYFDDADRMPGITGLNLLQILESRLDNVVYRMGLASSRTEARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H+ + VNG VNI SYR G +E+ +K+ V A++ A R E++ V+ Sbjct: 120 IVRHKLLKVNGGIVNIPSYRVAVGSRLELVDGAKEQLRVNAATEAAGSRGAAEWLDVDLP 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P + ++ L+VE YS+ Sbjct: 180 SRQGVYREMPVRDQ---LDSNIREQLIVELYSK 209 >gi|291298741|ref|YP_003510019.1| 30S ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728] gi|290567961|gb|ADD40926.1| ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728] Length = 208 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + RR L+ + K P+ +R + PG HG+ R + Y LQLR Sbjct: 1 MARYTGPDCRRCRREKMKLFLKGAKCESAKCPLESRPFPPGQHGRGRPKETEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + EK+F + +KEA+R G T L+ LESRLD +VYRA F + ARQ Sbjct: 60 KQKAKRTYGVL-EKQFSNYYKEANRRSGKTGEELLKILESRLDNVVYRAGFAKSRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H +VNGR VNI SYR D++EV+ KS ++ + A ++ E+ P ++ Sbjct: 119 LVLHGHFIVNGRKVNIPSYRVTAKDIVEVRPKSVEMTPFVVARAEAGEKKTPAWLESIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P +Q L+VE YS+ Sbjct: 179 KMKILVHNLPERQ---SIDTQVQEQLIVELYSK 208 >gi|237751463|ref|ZP_04581943.1| 30S ribosomal protein S4 [Helicobacter bilis ATCC 43879] gi|229372829|gb|EEO23220.1| 30S ribosomal protein S4 [Helicobacter bilis ATCC 43879] Length = 208 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR+G +L + KS R YGPG HG R+ K S +GLQLR Sbjct: 1 MARYRGPVEKIERRLGVSLALKGERRLAGKSAREKRDYGPGQHG-MRRGKISDYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIFKEA+R G+T NLI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-ISEKQFRSIFKEANRQEGNTGENLIRLLELRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V H H+LV+G+ V+I S++ K+G +EV++KSK ++ + L ++ + ++ ++ D Sbjct: 119 LVTHGHILVDGKRVDIPSFQIKQGQKVEVREKSKNNVQIVRSLDLTDQIGIVPWVDIDKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + + ++ L+VE YS+ Sbjct: 179 KKFGIFTRNPERSE---VEIPIEERLIVELYSK 208 >gi|78185157|ref|YP_377592.1| 30S ribosomal protein S4 [Synechococcus sp. CC9902] gi|116072265|ref|ZP_01469532.1| 30S ribosomal protein S4 [Synechococcus sp. BL107] gi|123581244|sp|Q3AWW5|RS4_SYNS9 RecName: Full=30S ribosomal protein S4 gi|78169451|gb|ABB26548.1| SSU ribosomal protein S4P [Synechococcus sp. CC9902] gi|116064787|gb|EAU70546.1| 30S ribosomal protein S4 [Synechococcus sp. BL107] Length = 202 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LESRLD I +R F PT+ +RQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLESRLDNICFRLGFGPTVPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+ K GDV+ +++K ++P ++ ++ + A Sbjct: 117 VTVNGRVTDIASYQVKPGDVLAIREKKGSKQLAEGNLAFPGLSNIPPHLELDKAKLSAKC 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 T---GRCEREWVALEINELLVVEYYSR 200 >gi|154148523|ref|YP_001405813.1| 30S ribosomal protein S4 [Campylobacter hominis ATCC BAA-381] gi|171769700|sp|A7HZX2|RS4_CAMHC RecName: Full=30S ribosomal protein S4 gi|153804532|gb|ABS51539.1| ribosomal protein S4 [Campylobacter hominis ATCC BAA-381] Length = 208 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS+ K++RR+G +L+ + KS + R Y PG HGQ R++K S +G QLR Sbjct: 1 MSRYTGPVEKLERRLGVDLFMKGERRLAGKSALLKRPYAPGQHGQ-RRAKVSEYGSQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +FKEA R G+T L+ LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-LSEKQFRRLFKEAARREGNTGEILVQLLEQRLDNLVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G+ V+I SY K G IE+ +KSK +L A +L A+ + ++ V D Sbjct: 119 LVTHGHILVDGKRVDIPSYSVKVGQKIEIAEKSKNNPQILRAVELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KKFGIFTRKPERDEIV---IPIEERFIVELYSK 208 >gi|259501666|ref|ZP_05744568.1| 30S ribosomal protein S4 [Lactobacillus iners DSM 13335] gi|259166951|gb|EEW51446.1| 30S ribosomal protein S4 [Lactobacillus iners DSM 13335] Length = 208 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG ++K S +G QL+ KQK++ Sbjct: 6 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPGNRTKVSEYGEQLKEKQKLRW 64 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++FR++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 65 MFG-LNERQFRNLFVLAGKIREGKHGVNFMIMLEKRLDNVVYRLGLATTREQARQLVNHG 123 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I S++ K G I +K+KSK L V +A + A P +++ + M + Sbjct: 124 HILVDGKRVDIPSFQVKVGQEISLKEKSKNLQQVKDALE-ATVSRPAFVTFDESKMTGSL 182 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 183 VRLPERDEMEP---EIDESLVVEWYNK 206 >gi|113952789|ref|YP_729847.1| 30S ribosomal protein S4 [Synechococcus sp. CC9311] gi|123327937|sp|Q0ICH5|RS4_SYNS3 RecName: Full=30S ribosomal protein S4 gi|113880140|gb|ABI45098.1| ribosomal protein S4 [Synechococcus sp. CC9311] Length = 202 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRIGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR +I SY+CK GDVI ++++ Q +VP ++ ++ + A Sbjct: 117 VTVNGRVTDIASYQCKAGDVIAIRERKCSKLLAEANLQFPGLANVPPHLELDKPKLSAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 I---GRAEREWVALEINELLVVEYYSR 200 >gi|257870579|ref|ZP_05650232.1| ribosomal protein S4 [Enterococcus gallinarum EG2] gi|257804743|gb|EEV33565.1| ribosomal protein S4 [Enterococcus gallinarum EG2] Length = 203 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ KI RR+G +L K + R Y PG HG + K S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKISRRLGISLSETGKE-LARRPYAPGQHGPNSRGKKSEYGMQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFRTLFIKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY + G VI V++KS+ ++++ EA + ++S + + + + Sbjct: 119 HILVDGKRVDIPSYHVEVGQVISVREKSQNISTIKEAIEATTGRT-AFVSFDDEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + + LVVEFY Sbjct: 178 TRLPERDE---LTAEVDEALVVEFY 199 >gi|108804948|ref|YP_644885.1| 30S ribosomal protein S4P [Rubrobacter xylanophilus DSM 9941] gi|123068978|sp|Q1AU55|RS4_RUBXD RecName: Full=30S ribosomal protein S4 gi|108766191|gb|ABG05073.1| SSU ribosomal protein S4P [Rubrobacter xylanophilus DSM 9941] Length = 200 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + + DRR G L K+P+ + Y PG HG+ R+ + Y GL+L KQK + Sbjct: 1 MARYTGPRGRRDRRAGVMLSSMRKNPLEKKPYPPGEHGRDRQRQTEY-GLRLMEKQKARW 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG +SE++FR ++EA R G + NL+ +E R+D +VYR F + ARQ V H H Sbjct: 60 YYG-VSERQFRRAYEEAIRQPGVSGENLLRLMELRMDNVVYRMGFATSRPQARQLVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 L+NGR NI S K GDVI V+ KS++L + EA + VP ++ +H+N + Sbjct: 119 FLLNGRKHNIPSATLKPGDVITVRDKSRRLQPIQEAVEQV-VAVPAWLEADHENFTGRVL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + ++ L++EFYSR Sbjct: 178 HTPSRDE---IDAPVEEQLIIEFYSR 200 >gi|149197866|ref|ZP_01874915.1| 30S ribosomal protein S4 [Lentisphaera araneosa HTCC2155] gi|149139087|gb|EDM27491.1| 30S ribosomal protein S4 [Lentisphaera araneosa HTCC2155] Length = 205 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 114/209 (54%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 M K +K KI RR G NL+G K + R PG+HG + K S +G QL KQK Sbjct: 1 MGKYSGNKGKICRRFGVNLFGNMKYDKVLAKRPNPPGVHGANAARKKLSEYGKQLVEKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +K YG + EK+FR F A + G T +NL+ LE+RLD +VYR F PT AARQ V Sbjct: 61 LKITYG-LREKQFRITFDRAAKLSGVTGNNLMVLLEARLDNVVYRLGFAPTRSAARQLVG 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H H+ +NGR NI SY + GDV+ +K S+ A V A + PE++S+ D + Sbjct: 120 HGHIRINGRRCNIPSYSVRPGDVVSLKDSSRSKALVQRFLDGARGETPEWVSLIKDELKG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +VVE YS+ Sbjct: 180 EIVRLPEREE---IPSVADELMVVELYSK 205 >gi|240047378|ref|YP_002960766.1| 30S ribosomal protein S4 [Mycoplasma conjunctivae HRC/581] gi|239984950|emb|CAT04943.1| 30S ribosomal protein S4 [Mycoplasma conjunctivae] Length = 206 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ K RR+G ++ K R Y PG HG R+ K S +G+ L+ KQK+ Sbjct: 1 MSRYTGPVFKKSRRLGFSILESGKEFVKGKQRKYAPGQHGPTRRYKLSDYGIHLQEKQKV 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SEK+FR+ F +A + G N + LESR D +VYR+ F T ARQ VNH Sbjct: 61 RFMYG-VSEKQFRNTFNKAIKKPGIAGTNFLQALESRFDNVVYRSGFAETRKQARQLVNH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGD--VIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 H L+NG+ VNI S + K GD + K++ K +V S L ++ + ++ V+ N Sbjct: 120 GHFLLNGKKVNIPSIQLKPGDSFELTSKKEGKIRKNVQILSALEKKTIASWVEVDVKNFK 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A +R+P + ++ +L+VEFYS+ Sbjct: 180 AKLIRLPERSE---LNQEIKESLIVEFYSK 206 >gi|296141063|ref|YP_003648306.1| ribosomal protein S4 [Tsukamurella paurometabola DSM 20162] gi|296029197|gb|ADG79967.1| ribosomal protein S4 [Tsukamurella paurometabola DSM 20162] Length = 201 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLGVDLVGGS-EAFERRPYPPGQHGRARVKESEYL-LQLKEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++EA + G T L+ LE+RLD +VYRA T ARQ V H H Sbjct: 59 LYG-VMEKQFSRYYQEAKTASGKTGDALLQILETRLDNVVYRAGLARTRRQARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VNG V++ SYR + D+I+V+ KS A + ER ++ V + Sbjct: 118 FTVNGVRVDVPSYRVSQYDIIDVRPKSLGTTPFQIARETVGERTPAAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + V Q L+VE+YS+ Sbjct: 178 HRVPEREQ---IDVPFQEQLIVEYYSK 201 >gi|226968687|ref|YP_002808647.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299] gi|226431165|gb|ACO55571.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299] Length = 198 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M++ + KI RR+GE K P R+YGPG HGQ K + F ++L+ KQK++ Sbjct: 1 MARYRGPRVKIVRRLGELPGLTTKVP--NRTYGPGQHGQATSTGKLTQFRVRLQEKQKLR 58 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ISEK+ + + A R++G T L+ LE RLD+IVYR F PTI AARQ+V+H Sbjct: 59 YNYG-ISEKQLLTYVRRARRAKGPTGEVLLQMLEMRLDSIVYRLGFAPTIRAARQYVSHG 117 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 + VNG++VNI SY C G+ I + V+E + VP +++V+ Sbjct: 118 LITVNGQTVNIPSYNCLPGETI-----ASTSNPVVENCKTFGGAVPSHLTVDTAKTTGKI 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ + + + + L++EFYSR Sbjct: 173 QRVITRSQ---IALTVNELLIIEFYSR 196 >gi|302524021|ref|ZP_07276363.1| ribosomal protein S4 [Streptomyces sp. AA4] gi|302432916|gb|EFL04732.1| ribosomal protein S4 [Streptomyces sp. AA4] Length = 201 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ +I RR+ +L G + R Y PG HG+ R + Y LQ + KQK + Sbjct: 1 MARYTGPATRISRRLKVDLIGGDQ-AFERRPYPPGQHGRGRIKESEYL-LQSQEKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++F +KEA R G T NL+ LESRLD ++YRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFVRYYKEAVRRPGKTGENLLQILESRLDNVIYRAGIARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG VN+ SY+ + D+I+V+ KS + + A + ER VP ++ V N+ Sbjct: 118 FLVNGVKVNVPSYQVTKWDIIDVRPKSMGMLPFVAAKEAFGERPVPAWLQVVPSNLRVLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPVQEQLIVELYSK 201 >gi|145596407|ref|YP_001160704.1| ribosomal protein S4 [Salinispora tropica CNB-440] gi|145305744|gb|ABP56326.1| SSU ribosomal protein S4P [Salinispora tropica CNB-440] Length = 208 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + PK P +R + PG HG+ R + Y LQLR Sbjct: 1 MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR ++EA + T L+ LESRLD +VYRA + + ARQ Sbjct: 60 KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H +VNG+ V+I SYR KE D++EV+ KSK+L L A ++ + VP ++ Sbjct: 119 LVKHGHFVVNGKKVDIPSYRVKEHDIVEVRGKSKELTPFLVAQAESGSKSVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +PS +Q L+VE YS+ Sbjct: 179 QMKVLVHSLPSRQ---VIDTQVQEQLIVELYSK 208 >gi|126656084|ref|ZP_01727468.1| 30S ribosomal protein S4 [Cyanothece sp. CCY0110] gi|126622364|gb|EAZ93070.1| 30S ribosomal protein S4 [Cyanothece sp. CCY0110] Length = 202 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+P R+Y PG HGQ R+ + Y ++L KQK+ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQGRRKRSEY-AIRLEEKQKLLY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ K+A RS T L+ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VTEKQLVRYMKKARRSTDSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V+VNGR VNI SY+C+ GDVI V+ K V Q ++PE++ + + + Sbjct: 117 VMVNGRVVNIASYQCRPGDVISVRNKDNSRRMVETNMQYPGLANLPEHLEFDKNTLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NNVIKR---EWVALQINELLVVEYYSR 200 >gi|257866598|ref|ZP_05646251.1| ribosomal protein S4 [Enterococcus casseliflavus EC30] gi|257872886|ref|ZP_05652539.1| ribosomal protein S4 [Enterococcus casseliflavus EC10] gi|257876202|ref|ZP_05655855.1| ribosomal protein S4 [Enterococcus casseliflavus EC20] gi|325567299|ref|ZP_08143966.1| 30S ribosomal protein S4 [Enterococcus casseliflavus ATCC 12755] gi|257800556|gb|EEV29584.1| ribosomal protein S4 [Enterococcus casseliflavus EC30] gi|257807050|gb|EEV35872.1| ribosomal protein S4 [Enterococcus casseliflavus EC10] gi|257810368|gb|EEV39188.1| ribosomal protein S4 [Enterococcus casseliflavus EC20] gi|325158732|gb|EGC70878.1| 30S ribosomal protein S4 [Enterococcus casseliflavus ATCC 12755] Length = 203 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 7/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ KI RR+G +L K + R Y PG HG + K S +G+QL KQK++ Sbjct: 1 MSRYTGPSWKISRRLGISLSETGKE-LARRPYAPGQHGPNSRGKKSEYGMQLTEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFRTLFIKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HVLV+G+ V+I SY + G VI V++KS+ ++++ EA + A ++S + + + + Sbjct: 119 HVLVDGKRVDIPSYHVEVGQVISVREKSQNISTIKEAVE-ATAGRASFVSFDSEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 R+P + + LVVEFY Sbjct: 178 TRLPERDE---LSAEVDEALVVEFY 199 >gi|224417910|ref|ZP_03655916.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491] gi|253827249|ref|ZP_04870134.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491] gi|313141451|ref|ZP_07803644.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491] gi|253510655|gb|EES89314.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491] gi|313130482|gb|EFR48099.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491] Length = 208 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS ++ R YGPG HGQRR Y G+QLR Sbjct: 1 MARYRGPVEKIERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQRRGKISEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG +SEK+FRSIF EA+R G+T NLI +E RLD +VYR F T ARQ Sbjct: 60 KQKARLMYG-VSEKQFRSIFVEANRLEGNTGENLIKLIERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G+ +NI S G IE+ +K+K+ + A +L + + ++ V+ + Sbjct: 119 LVVHGHILVDGKRLNIPSAFVSAGQKIEICEKTKKNPQIQRAIELTKQTGIVPWVDVDQE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + V + ++ L+VE YS+ Sbjct: 179 KVFGIFTRLPEREEVV---IPIEERLIVELYSK 208 >gi|148284289|ref|YP_001248379.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Boryong] gi|172047212|sp|A5CCV1|RS4_ORITB RecName: Full=30S ribosomal protein S4 gi|146739728|emb|CAM79558.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Boryong] Length = 207 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 94/206 (45%), Positives = 135/206 (65%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAKQKMK 59 M+K SK+K+ RR+G ++WG K +N ++Y PG G + L AKQ++K Sbjct: 1 MTKVIKSKYKVSRRLGTSVWGHEKDAINNKNYKPGQQGNSSSISKPSDYSKHLIAKQRLK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +YG ISEK+FR+ FK A + G+T+ NL+ LE RLD +VYR PTIFAARQ V+H+ Sbjct: 61 SHYGRISEKQFRNTFKIARKKSGNTAENLVGLLERRLDAVVYRLNIAPTIFAARQLVSHK 120 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ +NI SYR K GD IE+ +++KQ+ V+ A R +PEY++ + + + F Sbjct: 121 HIKVNGKKINIASYRVKAGDSIELSEQAKQIPIVIGAISKKARRIPEYLAFDDEKFIGNF 180 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205 +R+PSS+ +VPYP Q NLVVEFYS Sbjct: 181 IRMPSSISEVPYPFDPQINLVVEFYS 206 >gi|296137040|ref|YP_003644282.1| ribosomal protein S4 [Thiomonas intermedia K12] gi|294341217|emb|CAZ89618.1| 30S ribosomal subunit protein S4 [Thiomonas sp. 3As] gi|295797162|gb|ADG31952.1| ribosomal protein S4 [Thiomonas intermedia K12] Length = 207 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS----PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ +K K+ RR G +L+ + PG HG+ ++ S +G QLR KQ Sbjct: 1 MARFIGAKGKLTRREGADLFLKSARRGIDSKVKLETKPGQHGRTSGARTSDYGKQLREKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + E++FR ++EA R G+T NL+ LESRLD +VYR + T ARQ V Sbjct: 61 KVKRMYGVL-ERQFRRYYEEAQRRSGNTGTNLLMLLESRLDNVVYRMGYGSTRAEARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175 +HR + VNG+ +NI S K GDV+ V++KS+ A + E+ +LAE + P ++ V+ M Sbjct: 120 SHRSITVNGKVLNIPSALVKTGDVVAVREKSRNQARIQESVKLAESNGFPAWVQVDGAKM 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F + P + + + +L++E YSR Sbjct: 180 EGVFKKAPDRDE---FGNDINESLIIELYSR 207 >gi|11467355|ref|NP_043212.1| ribosomal protein S4 [Cyanophora paradoxa] gi|1350893|sp|P48133|RR4_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S4 gi|1016156|gb|AAA81243.1| ribosomal protein S4 [Cyanophora paradoxa] Length = 201 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE L G + V R Y PG HGQ+ + + Y ++L KQK++ Sbjct: 1 MSRYKGPSLRIIRRLGE-LPGLTRKVVKKRKYPPGQHGQKSRKRSEY-AIRLEEKQKLRY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + A + +G T L+ LE RLD IV+R PTI A+RQ VNH H Sbjct: 59 NYG-LTERQLVQCVRRAKQMKGSTGQILLQLLEMRLDNIVFRLGMAPTIPASRQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VN + V+I SY+CK GD+I VK+++ V ++P ++ + + Sbjct: 118 ICVNNKVVSIPSYQCKPGDIITVKERNASKKIVETNLLFPGLANLPSHLEFDKSKLQGKV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + L+VEFYSR Sbjct: 178 NDIIQR---EWVALEVNELLIVEFYSR 201 >gi|78776527|ref|YP_392842.1| 30S ribosomal protein S4 [Sulfurimonas denitrificans DSM 1251] gi|90101735|sp|Q30TS4|RS4_SULDN RecName: Full=30S ribosomal protein S4 gi|78497067|gb|ABB43607.1| SSU ribosomal protein S4P [Sulfurimonas denitrificans DSM 1251] Length = 208 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS + R Y PG HGQRRK Y GLQL Sbjct: 1 MARYRGPVEKIERRFGVSLNLKGERRLAGKSALEKRPYAPGQHGQRRKKVSEY-GLQLNE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR++F EA R G+T NL++ +E RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRALFVEAKRREGNTGTNLVTLIEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G ++I SYR + G IE+++ SK + ++ A +L + + ++ ++ D Sbjct: 119 LVTHGHLLVDGAKLDIPSYRVRPGQKIEIRESSKNNSQIVRALELTNQTGLAPWVDIDAD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + V + ++ L+VE YS+ Sbjct: 179 KKFGIFTRLPEREEVV---IPVEERLIVELYSK 208 >gi|172035133|ref|YP_001801634.1| 30S ribosomal protein S4 [Cyanothece sp. ATCC 51142] gi|254764582|sp|B1X067|RS4_CYAA5 RecName: Full=30S ribosomal protein S4 gi|171696587|gb|ACB49568.1| 30S ribosomal protein S4 [Cyanothece sp. ATCC 51142] Length = 202 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+P R+Y PG HGQ R+ + Y ++L KQK+ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQGRRKRSEY-AIRLEEKQKLLY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ K+A RS T L+ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VTEKQLVRYMKKARRSTDSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V+VNGR VNI SY+C+ GDVI V+ K V Q ++P+++ + + + Sbjct: 117 VIVNGRVVNIASYQCRPGDVISVRNKDNSRRMVETNMQYPGLANLPDHLEFDKNTLTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NDVIKR---EWVALQINELLVVEYYSR 200 >gi|29653614|ref|NP_819306.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 493] gi|154706831|ref|YP_001425158.1| 30S ribosomal protein S4 [Coxiella burnetii Dugway 5J108-111] gi|161831288|ref|YP_001596209.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 331] gi|212213226|ref|YP_002304162.1| 30S ribosomal protein S4 [Coxiella burnetii CbuG_Q212] gi|41017834|sp|Q83EQ3|RS4_COXBU RecName: Full=30S ribosomal protein S4 gi|189045376|sp|A9KD07|RS4_COXBN RecName: Full=30S ribosomal protein S4 gi|189045377|sp|A9NAZ4|RS4_COXBR RecName: Full=30S ribosomal protein S4 gi|226697830|sp|B6J239|RS4_COXB2 RecName: Full=30S ribosomal protein S4 gi|29540876|gb|AAO89820.1| SSU ribosomal protein S4P [Coxiella burnetii RSA 493] gi|154356117|gb|ABS77579.1| SSU ribosomal protein S4P [Coxiella burnetii Dugway 5J108-111] gi|161763155|gb|ABX78797.1| ribosomal protein S4 [Coxiella burnetii RSA 331] gi|212011636|gb|ACJ19017.1| SSU ribosomal protein S4P [Coxiella burnetii CbuG_Q212] Length = 206 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K ++ RR +L + ++++ PG+H Q R+ + + +G+QLR KQ Sbjct: 1 MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQ-RRGRTTDYGVQLRMKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 +K+YY + EK+F + +K+ADR +G T NL+ LESRLD +VYR F T ARQ + Sbjct: 60 MIKRYYDVL-EKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFAATRAEARQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 +H+ +LVNG VNI SY+ K GD+IEV+ ++K + A +LA++ P +I V+ M Sbjct: 119 SHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLRIKGALELAQQRAPISWIEVDTKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + P + NLVVE YS+ Sbjct: 179 TGTFKEQPDVAE---LPAEFKVNLVVELYSK 206 >gi|289608314|emb|CBI60616.1| unnamed protein product [Sordaria macrospora] Length = 190 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 118/192 (61%), Positives = 144/192 (75%), Gaps = 3/192 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K Sbjct: 1 MSKRSSAKYKLDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYGD++EK+F+ ++EA R +GDT NLI LE RLD IVYRAKF PT++AARQ V+H H Sbjct: 61 YYGDVTEKQFKRTYEEASRMKGDTGQNLIGLLEQRLDMIVYRAKFAPTVWAARQLVSHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG NI S RC GD I + K++++A VLEA LAERD+PEYI + TF Sbjct: 121 VRVNGVKCNIASRRCYVGDEISLGTKAQEMALVLEAQTLAERDIPEYIGADGTK--VTFN 178 Query: 181 RIPSSLKDVPYP 192 R+P+ L +VPYP Sbjct: 179 RVPT-LDEVPYP 189 >gi|312880344|ref|ZP_07740144.1| SSU ribosomal protein S4P [Aminomonas paucivorans DSM 12260] gi|310783635|gb|EFQ24033.1| SSU ribosomal protein S4P [Aminomonas paucivorans DSM 12260] Length = 208 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS+ ++ R G L+ + + + R+ PG HG R++K S +GL+LR Sbjct: 1 MSRYTGPVCRLCRAEGTKLFLKGDRCYTERCAMAKRNSKPGQHG-TRRTKTSEYGLRLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++++YG ++E +F I+++A G T H+ + LE RLD +VYR + AR+ Sbjct: 60 KQKLRRFYG-LNESQFAQIYEKAAAMPGQTGHDFLQLLERRLDNVVYRLGLAVSRRQARE 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H LVNGR ++I S + GDV+ V++KS+ +A + ++ A R VP ++ +N + Sbjct: 119 LVRHGHFLVNGRKLDIPSAVLRAGDVVSVREKSRDVAVLKGNAEVAASRAVPAWLEINGE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M V +P + V + LVVEFY+R Sbjct: 179 AMSGRVVTLPVREQ---IEVPVNEQLVVEFYAR 208 >gi|317131397|ref|YP_004090711.1| ribosomal protein S4 [Ethanoligenens harbinense YUAN-3] gi|315469376|gb|ADU25980.1| ribosomal protein S4 [Ethanoligenens harbinense YUAN-3] Length = 208 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S K+ RR G+ L+ + K V RSY PG HGQ RK Y G+QLRA Sbjct: 1 MARYTDSVCKLCRREGQKLFLKGERCYSDKCSVGRRSYAPGQHGQDRKKVSEY-GIQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++YYG + E++FR F+ A+ G T NL+ LE RLD +VYR F + +RQ Sbjct: 60 KQKARRYYGVL-ERQFRHYFEIAESKPGITGENLLRLLELRLDNVVYRLGFASSHAQSRQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H +NG+ NI S R + GDV+ VK+ S+ + + A R +P+++ +N + Sbjct: 119 MVRHGHFTINGKKANIPSMRVRVGDVVAVKEGSRTNEFIKSVVEANASRPIPKWLEINRE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T +P+ + ++ +L+VE YS+ Sbjct: 179 ALSGTVAVLPNR---EDIDLSVEEHLIVELYSK 208 >gi|319948696|ref|ZP_08022817.1| 30S ribosomal protein S4 [Dietzia cinnamea P4] gi|319437598|gb|EFV92597.1| 30S ribosomal protein S4 [Dietzia cinnamea P4] Length = 201 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G + R + PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLGVDLVG-GDTAFERRPFPPGHHGRARIKESEYR-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R G T NL+ LESRLD +VYRA T ARQ V H H Sbjct: 59 TYG-VMEKQFRRYYEEANRRAGKTGENLLQILESRLDNVVYRAGLARTRRQARQLVAHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVN + V I SYR + D+I+V+ KS ++ A + L ER VP ++ V + Sbjct: 118 FLVNDQKVTIPSYRVSQYDIIDVRPKSTKMDWFEIAQETLGERPVPAWLQVVPTTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IEVPLQEQLIVELYSK 201 >gi|257095016|ref|YP_003168657.1| 30S ribosomal protein S4 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047540|gb|ACV36728.1| ribosomal protein S4 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 209 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K + RR GE L+ + K + RSY PG HGQ+ + S +G+ LR Sbjct: 1 MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRSYAPGQHGQKSGQRLSDYGVHLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR ++KEADR RG T L+ LESRLD++ YR F + +RQ Sbjct: 61 KQKIRRIYGVL-EGQFRKVYKEADRRRGVTGEVLLQLLESRLDSVAYRMGFAASRSESRQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHD 173 V H VLVNGR VNI SY+ + GDV+EV +K+K V + R PE++ V+ Sbjct: 120 VVRHNGVLVNGRRVNIPSYQVRPGDVVEVCEKAKAHLRVKAALAAAEARGFPEWVEVDAK 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P + +LV+E YS+ Sbjct: 180 AAKGVYKAHPERSE---LPPTINESLVIELYSK 209 >gi|238898903|ref|YP_002924585.1| 30S ribosomal subunit protein S4 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495283|sp|C4K794|RS4_HAMD5 RecName: Full=30S ribosomal protein S4 gi|229466663|gb|ACQ68437.1| 30S ribosomal subunit protein S4 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 206 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K+ RR G +L+ + + T+ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPNLKLSRREGTDLFLKSGVRAIETKCKIDQPPGQHG-TRKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++F +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRVYGVL-ERQFHGYYKEAARLKGNTGENLLQLLERRLDNVVYRIGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175 H+ +LVN R VNI S+ D + V++K+++ + + E+ QL A+R+ ++ ++ M Sbjct: 119 THKAILVNDRVVNIPSFLVSPNDRVSVRRKAQKQSRIKESLQLSAQREELSWLEIDSSEM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF IP + +L+VE YS+ Sbjct: 179 IGTFKFIPERA---VISGGIDEHLIVELYSK 206 >gi|226356866|ref|YP_002786606.1| 30S ribosomal protein S4 [Deinococcus deserti VCD115] gi|259495272|sp|C1CXD5|RS4_DEIDV RecName: Full=30S ribosomal protein S4 gi|226318856|gb|ACO46852.1| putative 30S ribosomal protein S4 [Deinococcus deserti VCD115] Length = 206 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 120/210 (57%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 M + S K+ RR G NL K ++ R Y PG HGQRR + +PS + ++LR KQK Sbjct: 1 MGRFRGSITKLSRREGINLAETEKVQKYLDKRPYAPGQHGQRRGRGRPSDYSVRLREKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + + YG + EK+FR++F+EA G T + LE RLD +V+R F T ARQFV Sbjct: 61 LARLYG-MGEKQFRNLFEEAASVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVG 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMV 176 H H+LVNG+ V+I SYR K GD I V + S+Q+ V E + R V ++ ++ +N Sbjct: 120 HGHILVNGKKVDIPSYRVKIGDEISVFEGSRQMGFVQENMEAQKRRRVSPWVELDVENFK 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P+ + + N ++E+YSR Sbjct: 180 GTFSRLPAR---EDLALPINENFIIEYYSR 206 >gi|163791292|ref|ZP_02185706.1| 30S ribosomal protein S4 [Carnobacterium sp. AT7] gi|159873433|gb|EDP67523.1| 30S ribosomal protein S4 [Carnobacterium sp. AT7] Length = 201 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + K + +GLQL+ KQK++ Sbjct: 1 MSRYTGPSWKVSRRLGISLSGTGKE-IERRPYAPGPHGPNSRKKLTEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++F ++F +A + + N + LE RLD +VYR T +RQ VNH Sbjct: 60 MFG-MNERQFSNLFLKAGKIKEGKHGENFMILLEQRLDNVVYRLGLATTRRQSRQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY G VI V++KSK + + A++ P+Y++ + + + ++ Sbjct: 119 HILVDGKRVDIPSYSVSVGQVISVREKSKNMEIIKSAAESL-FGRPDYVTFDVEKLEGSY 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + ++VE+YSR Sbjct: 178 NRLPLRDE---LSAEIDETIIVEYYSR 201 >gi|313885082|ref|ZP_07818834.1| ribosomal protein S4 [Eremococcus coleocola ACS-139-V-Col8] gi|312619773|gb|EFR31210.1| ribosomal protein S4 [Eremococcus coleocola ACS-139-V-Col8] Length = 201 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L K ++ R Y PG HG R K + +G QL KQK++ Sbjct: 1 MARYTGPAWKKSRRLGISLTETGKE-LSRRPYAPGQHGNAR-HKVTEYGAQLNEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR++F +A + G N + LE+RLD +VYR + T ARQ V H H Sbjct: 59 MYG-LNERQFRTLFTKAAKMEGKHGENFMVILETRLDNLVYRLGYASTRRQARQLVAHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G+ V+I SY K VI ++++S+ LA + E + + +++S + +N Sbjct: 118 ITVDGQRVDIPSYLVKPEQVIGLRERSQDLAIIKENLEAVVSRL-DFVSFDENNKEGKMT 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVE+Y++ Sbjct: 177 RLPERGE---LSAEIDEALVVEYYNK 199 >gi|302191126|ref|ZP_07267380.1| 30S ribosomal protein S4 [Lactobacillus iners AB-1] gi|309803253|ref|ZP_07697350.1| ribosomal protein S4 [Lactobacillus iners LactinV 11V1-d] gi|309804768|ref|ZP_07698832.1| ribosomal protein S4 [Lactobacillus iners LactinV 09V1-c] gi|309806291|ref|ZP_07700304.1| ribosomal protein S4 [Lactobacillus iners LactinV 03V1-b] gi|309808534|ref|ZP_07702432.1| ribosomal protein S4 [Lactobacillus iners LactinV 01V1-a] gi|309809939|ref|ZP_07703787.1| ribosomal protein S4 [Lactobacillus iners SPIN 2503V10-D] gi|312871661|ref|ZP_07731753.1| ribosomal protein S4 [Lactobacillus iners LEAF 3008A-a] gi|312871931|ref|ZP_07732013.1| ribosomal protein S4 [Lactobacillus iners LEAF 2062A-h1] gi|312873253|ref|ZP_07733309.1| ribosomal protein S4 [Lactobacillus iners LEAF 2052A-d] gi|312874615|ref|ZP_07734639.1| ribosomal protein S4 [Lactobacillus iners LEAF 2053A-b] gi|325911708|ref|ZP_08174115.1| ribosomal protein S4 [Lactobacillus iners UPII 143-D] gi|325913026|ref|ZP_08175399.1| ribosomal protein S4 [Lactobacillus iners UPII 60-B] gi|329921128|ref|ZP_08277651.1| ribosomal protein S4 [Lactobacillus iners SPIN 1401G] gi|308164761|gb|EFO67011.1| ribosomal protein S4 [Lactobacillus iners LactinV 11V1-d] gi|308165878|gb|EFO68097.1| ribosomal protein S4 [Lactobacillus iners LactinV 09V1-c] gi|308167275|gb|EFO69441.1| ribosomal protein S4 [Lactobacillus iners LactinV 03V1-b] gi|308168211|gb|EFO70331.1| ribosomal protein S4 [Lactobacillus iners LactinV 01V1-a] gi|308169727|gb|EFO71772.1| ribosomal protein S4 [Lactobacillus iners SPIN 2503V10-D] gi|311089845|gb|EFQ48265.1| ribosomal protein S4 [Lactobacillus iners LEAF 2053A-b] gi|311091264|gb|EFQ49652.1| ribosomal protein S4 [Lactobacillus iners LEAF 2052A-d] gi|311092508|gb|EFQ50870.1| ribosomal protein S4 [Lactobacillus iners LEAF 2062A-h1] gi|311092886|gb|EFQ51238.1| ribosomal protein S4 [Lactobacillus iners LEAF 3008A-a] gi|325476474|gb|EGC79633.1| ribosomal protein S4 [Lactobacillus iners UPII 143-D] gi|325477706|gb|EGC80845.1| ribosomal protein S4 [Lactobacillus iners UPII 60-B] gi|328935035|gb|EGG31524.1| ribosomal protein S4 [Lactobacillus iners SPIN 1401G] Length = 203 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG ++K S +G QL+ KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPGNRTKVSEYGEQLKEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++FR++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 60 MFG-LNERQFRNLFVLAGKIREGKHGVNFMIMLEKRLDNVVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I S++ K G I +K+KSK L V +A + A P +++ + M + Sbjct: 119 HILVDGKRVDIPSFQVKVGQEISLKEKSKNLQQVKDALE-ATVSRPAFVTFDESKMTGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201 >gi|172040040|ref|YP_001799754.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109] gi|226697828|sp|B1VEY1|RS4_CORU7 RecName: Full=30S ribosomal protein S4 gi|171851344|emb|CAQ04320.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109] Length = 201 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G +S R Y PG G+ R + Y +QL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLRVDLVGGDRS-FERRPYPPGQAGRARIKESEYL-IQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+ G T NL+ LE+RLD ++YRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYAEANAMPGKTGDNLVILLEARLDNVIYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ +N+ S+R + D+I+V+ +S+ + EA L + +VP ++ V + Sbjct: 118 FTVNGKKINVPSFRVSQYDIIDVRDRSRSMLWFDEAQDNLVDANVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VE+YS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEYYSK 201 >gi|124514417|gb|EAY55930.1| ribosomal protein S4 [Leptospirillum rubarum] gi|206602702|gb|EDZ39183.1| Ribosomal protein S4 [Leptospirillum sp. Group II '5-way CG'] Length = 209 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 119/214 (55%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S + RR G L+ + K ++ RSY PG HGQ R +K S +GLQLR Sbjct: 1 MARYRGSVCRFCRREGVKLFLKGVRCLSTKCAIDRRSYPPGQHGQSR-AKISDYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ +G + EK+FR+ F+ A R +G T +L+S LE RLD++VYR + AR Sbjct: 60 KQKVKRIFGVL-EKQFRNAFERASRKKGVTGESLLSGLELRLDSVVYRMGLGTSRNEARM 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNH 172 V H H+ VNGR VNI S++CK DVI ++ KS+ E + AE +P ++ V Sbjct: 119 LVTHGHLEVNGRKVNIPSFQCKVSDVISLRTKSRSNERFKENLRDAETRGVIPSWLDVQK 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A P + +++ NL+VE YSR Sbjct: 179 EQFSAVVREQPKREE---INILISENLIVELYSR 209 >gi|242309344|ref|ZP_04808499.1| 30S ribosomal protein S4 [Helicobacter pullorum MIT 98-5489] gi|239523915|gb|EEQ63781.1| 30S ribosomal protein S4 [Helicobacter pullorum MIT 98-5489] Length = 208 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS ++ R YGPG HGQRR Y G+QLR Sbjct: 1 MARYRGPVEKIERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQRRGKISEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG +SEK+FRSIF EA+R G+T NLI +E RLD +VYR F T ARQ Sbjct: 60 KQKARMMYG-VSEKQFRSIFVEANRLEGNTGENLIKLIERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G+ +NI S G IE+ +K+K+ + A +L + + ++ V+ + Sbjct: 119 LVVHGHILVDGKRLNIPSAFVNAGQKIEICEKTKKNPQIQRAIELTKQTGIVPWVDVDQE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + V + ++ L+VE YS+ Sbjct: 179 KVFGIFTRLPEREEVV---IPIEERLIVELYSK 208 >gi|33862500|ref|NP_894060.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9313] gi|124023809|ref|YP_001018116.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9303] gi|41017827|sp|Q7V8U9|RS4_PROMM RecName: Full=30S ribosomal protein S4 gi|152112246|sp|A2CBJ1|RS4_PROM3 RecName: Full=30S ribosomal protein S4 gi|33640613|emb|CAE20402.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9313] gi|123964095|gb|ABM78851.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9303] Length = 202 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RS+ PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSHPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARAQDGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR ++I SY+CK GDV+ ++++ + +VP +I ++ M A Sbjct: 117 VTVNGRVLDIASYQCKAGDVVAIRERKGSKKLAEANLEFPGLANVPPHIELDKAKMSAK- 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I S + + + LVVE+YSR Sbjct: 176 --IISKCEREWVALEINELLVVEYYSR 200 >gi|189184338|ref|YP_001938123.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Ikeda] gi|226699098|sp|B3CU42|RS4_ORITI RecName: Full=30S ribosomal protein S4 gi|189181109|dbj|BAG40889.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Ikeda] Length = 207 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 93/206 (45%), Positives = 134/206 (65%), Gaps = 1/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAKQKMK 59 M+K SK+K+ RR+G ++WG K +N ++Y PG G + L AKQ++K Sbjct: 1 MTKVIKSKYKVSRRLGTSVWGHEKDAINNKNYKPGQQGNSSSVSKPSDYSKHLVAKQRLK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +YG I EK+FR+ FK A + G+T+ NL+ LE RLD +VYR PTIFAARQ V+H+ Sbjct: 61 SHYGRIPEKQFRNTFKIARKKSGNTAENLVGLLERRLDAVVYRLNIAPTIFAARQLVSHK 120 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ +NI SYR K GD IE+ +++KQ+ V+ A R +PEY++ + + + F Sbjct: 121 HIKVNGKKINIASYRVKAGDSIELSEQAKQIPIVIGAISKKARRIPEYLAFDDEKFIGNF 180 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205 +R+PSS+ +VPYP Q NLVVEFYS Sbjct: 181 IRMPSSISEVPYPFDPQINLVVEFYS 206 >gi|312199993|ref|YP_004020054.1| ribosomal protein S4 [Frankia sp. EuI1c] gi|311231329|gb|ADP84184.1| ribosomal protein S4 [Frankia sp. EuI1c] Length = 208 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 112/213 (52%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K RR L+ + PK P+ R Y PG HG+ R Y LQ R Sbjct: 1 MARYVGPDCKRCRREKTKLFLKGSKCESPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR + EA+R G T L+ LESRLD +VYRA F P+ AARQ Sbjct: 60 KQKCARIYGVL-EKQFRGYYDEANRRSGKTGDELLKILESRLDNVVYRAGFAPSRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H HV VNG V+I SYR + D++E+ KS++L + A + A +R VP ++ V Sbjct: 119 AVRHGHVQVNGGKVDIPSYRVSDNDIVEIAPKSRELTPFIVARETAGQRTVPAWLEVISS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ +Q L+VE YS+ Sbjct: 179 QMRILVHSLPARGA---IDTQVQEQLIVELYSK 208 >gi|159039806|ref|YP_001539059.1| RNA-binding S4 domain-containing protein [Salinispora arenicola CNS-205] gi|157918641|gb|ABW00069.1| RNA-binding S4 domain protein [Salinispora arenicola CNS-205] Length = 208 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + + RR L+ + PK P +R + PG HG+ R + Y LQLR Sbjct: 1 MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR ++EA + T L+ LESRLD +VYRA + + ARQ Sbjct: 60 KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H VNGR V+I SYR KE D++EV+ KSK+L L A ++ + VP ++ Sbjct: 119 LVKHGHFTVNGRKVDIPSYRVKEHDIVEVRGKSKELTPFLVAQAESGSKSVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +PS +Q L+VE YS+ Sbjct: 179 QMKVLVHSLPSRQ---VIDTQVQEQLIVELYSK 208 >gi|116629861|ref|YP_815033.1| 30S ribosomal protein S4 [Lactobacillus gasseri ATCC 33323] gi|116095443|gb|ABJ60595.1| SSU ribosomal protein S4P [Lactobacillus gasseri ATCC 33323] Length = 224 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG ++K S +G QL+ KQK++ Sbjct: 22 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 80 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++F+++F A + R N ++ LE RLD IVYR T ARQ VNH Sbjct: 81 MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 139 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY K G I ++ KSK L V +A A P ++S + M T Sbjct: 140 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALD-AVVSRPPFVSFDDSKMTGTL 198 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + L+VE+Y++ Sbjct: 199 VRLPERDEMEP---EVDEALIVEWYNK 222 >gi|149071984|ref|YP_001293516.1| ribosomal protein S4 [Rhodomonas salina] gi|172048713|sp|A6MVT7|RR4_RHDSA RecName: Full=30S ribosomal protein S4, chloroplastic gi|134302935|gb|ABO70739.1| ribosomal protein S4 [Rhodomonas salina] Length = 202 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE K+ R+ PG HG + + KPS + ++L KQK++ Sbjct: 1 MSRYRGAVVRIIRRLGELPGLTRKTT--RRNSRPGQHGDQPR-KPSEYAIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ K+A R +G T L+ LE RLD IV+R PTI AARQ VNH H Sbjct: 58 NYG-LTEKQLLRYVKDAKRIKGSTGEALLQLLEMRLDNIVFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VN + V+I SY+C+ DVI V+ ++ V ++P ++ ++ + +V Sbjct: 117 ICVNAKRVSIPSYQCQTTDVISVRNNARSKQLVENYLSFPGLANIPSHLEIDKEKLVGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + L+VE+YSR Sbjct: 177 NGIIERD---WVALQLNELLIVEYYSR 200 >gi|34558005|ref|NP_907820.1| 30S ribosomal protein S4 [Wolinella succinogenes DSM 1740] gi|41017817|sp|Q7M8F6|RS4_WOLSU RecName: Full=30S ribosomal protein S4 gi|34483723|emb|CAE10720.1| 30S RIBOSOMAL PROTEIN S4 [Wolinella succinogenes] Length = 208 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ KI+RR G +L + KS + R Y PG HGQRR Y GLQLR Sbjct: 1 MARYRGPVEKIERRFGVSLNLKGERRLAGKSSLEKRPYAPGQHGQRRSKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF+EA+R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-ISEKQFRSIFQEANRLEGNTGELLIKLLERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V+H HVLV+G+ VNI SY G +E+++KSK V + +L + + ++ V+ Sbjct: 119 MVSHGHVLVDGKRVNIPSYMVLPGQKVEIREKSKNNPQVQRSIELTKQTGIAPWVDVDQA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R+P + V + ++ L+VE YS+ Sbjct: 179 KVFGIFTRLPEREEVV---IPVEERLIVELYSK 208 >gi|159902949|ref|YP_001550293.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9211] gi|226699105|sp|A9BE29|RS4_PROM4 RecName: Full=30S ribosomal protein S4 gi|159888125|gb|ABX08339.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9211] Length = 202 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RS PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE+RLD + +R F PTI +RQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARSLEGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ ++I SY+CK GDVI +++K + +VP ++ M A Sbjct: 117 VTVNGKVLDIASYQCKPGDVISIREKKGSKKLAEGNLEFPGLANVPPHLEFEKSKMSAKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 T---GKCEREWVAIEINELLVVEYYSR 200 >gi|307297368|ref|ZP_07577174.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916628|gb|EFN47010.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2] Length = 208 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + P+ R PG HG + Y G+QLR+ Sbjct: 1 MARYTGPVCKLCRREGFKLYLKGERCFSPRCSQVKRPVAPGQHGASTRKLTQY-GMQLRS 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ +K+ YG + E++FR F+ A + +T L+ LESRLD IV+R F + ARQ Sbjct: 60 KQVVKRIYGVL-ERQFRRYFEAALKKNEETGTALMKILESRLDNIVFRMGFASSRRQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 VNH HVLVNGR VN S+ + GD++E+K+KS+ + + EA++ A ER ++ V+++ Sbjct: 119 LVNHGHVLVNGRRVNKPSFNLRVGDIVEIKEKSRSVLPIKEAAEAAKERTAYPWVEVDYE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T++R P ++V PV +Q ++E YS+ Sbjct: 179 TFRGTYLRYPV-TEEVEIPVDLQS--IIELYSK 208 >gi|256380568|ref|YP_003104228.1| 30S ribosomal protein S4 [Actinosynnema mirum DSM 43827] gi|255924871|gb|ACU40382.1| ribosomal protein S4 [Actinosynnema mirum DSM 43827] Length = 201 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 109/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ +I RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRISRRLKVDLIGGDQ-AFERRPYPPGQHGRGRIKESEYL-LQLQEKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+F +KEA R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-ILEKQFVRYYKEAVRRTGKTGENLLQILESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 LVNG VNI SY+ + D+I+VK KS L A + +R VP ++ V N+ Sbjct: 118 FLVNGHKVNIPSYQVSKFDIIDVKPKSLPLLPFEAARASFGDRPVPAWLQVVPSNLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + L+VE YS+ Sbjct: 178 HQLPERAQ---IDTPVTEQLIVELYSK 201 >gi|94676532|ref|YP_588800.1| ribosomal protein S4 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|152060936|sp|Q1LTB4|RS4_BAUCH RecName: Full=30S ribosomal protein S4 gi|94219682|gb|ABF13841.1| ribosomal protein S4 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 206 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR +L+ + ++++ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKMSRRENIDLFLKSGVRAIDSKCKIEQPPGQHGA-RKPRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR+ ++EA R +G+T +L+ LESRLD +VYR F T +RQ V Sbjct: 60 KVRRIYG-ILERQFRNYYQEAARLKGNTGESLLQLLESRLDNVVYRMGFGATRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VN VNI SY+ D I ++ K+K+ + + + +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNNHIVNIASYQVAINDKISIRDKAKKQSRIRASLELAEQREKPTWLEVDIVKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +IP + + +++VE YS+ Sbjct: 179 EGIFKKIPER---IHLSAHINEHMIVELYSK 206 >gi|220906440|ref|YP_002481751.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 7425] gi|254764583|sp|B8HXV1|RS4_CYAP4 RecName: Full=30S ribosomal protein S4 gi|219863051|gb|ACL43390.1| ribosomal protein S4 [Cyanothece sp. PCC 7425] Length = 204 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + ++ RR+G+ K+ + R+Y PG HGQ RK + Y ++L KQK++ Sbjct: 1 MARYRGPRLRVIRRLGDLPGLTRKAVPSRRAYPPGQHGQARKKRSEY-AMRLEEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + A R G T L+ LE RLD I++R PTI AARQ VNH H Sbjct: 60 NYG-LTERQLVRYVRRARRVSGSTGLALLQLLEMRLDNIIFRLGMAPTIPAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR V+I SY+C+ G+ I ++ K E + ++P ++ ++ + ++A Sbjct: 119 VTVNGRVVSIPSYQCRPGNEIGIRNKENSRRLAEENLKFPGLANLPTHLELDKNKLMAKV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 179 NSVVER---EWVALQVNELLVVEYYSR 202 >gi|67924299|ref|ZP_00517734.1| Ribosomal protein S4, bacterial and organelle form [Crocosphaera watsonii WH 8501] gi|67853848|gb|EAM49172.1| Ribosomal protein S4, bacterial and organelle form [Crocosphaera watsonii WH 8501] Length = 202 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+P R+Y PG HGQ R+ + Y ++L KQK+ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQGRRKRSEY-AIRLEEKQKLLY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ K+A R+ G T L+ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VTEKQLVRYMKKARRATGSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V+VNGR VNI SY+C+ GDVI V+ K V Q +VPE++ + + ++ Sbjct: 117 VMVNGRIVNIASYQCRPGDVISVRNKDHSRRLVEANMQYPGLANVPEHLEFDKNTLIGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NDVIKR---EWVALQINELLVVEYYSR 200 >gi|157363469|ref|YP_001470236.1| 30S ribosomal protein S4 [Thermotoga lettingae TMO] gi|172045985|sp|A8F4T8|RS4_THELT RecName: Full=30S ribosomal protein S4 gi|157314073|gb|ABV33172.1| RNA-binding S4 domain protein [Thermotoga lettingae TMO] Length = 209 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + + R Y PG HG++R K S +G QLRA Sbjct: 1 MARYTGPICRLCRREGMKLYLKGERCFTEHCAFDKRPYAPGDHGRQR-GKLSQYGTQLRA 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ M+ YG I E++F F++A GDT NL+ +ESR+D IVYR F + ARQ Sbjct: 60 KQVMRVIYG-IPERQFEHYFEKALGMSGDTRENLVRLVESRVDNIVYRLGFAISRRQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNG ++I SY+ + GD++EV++KS+ LA++ A + ++ R ++ V+ D Sbjct: 119 LVTHGHFSVNGVKIDIPSYKLRPGDIVEVREKSRSLAAIKHAVESSKDRTQVPWVEVDFD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + TF+R+P+ + PV + +VEFYSR Sbjct: 179 SYRGTFLRLPNLEEVTDLPVDV--QAIVEFYSR 209 >gi|291277243|ref|YP_003517015.1| 30S ribosomal protein S4 [Helicobacter mustelae 12198] gi|290964437|emb|CBG40287.1| 30S ribosomal protein S4 [Helicobacter mustelae 12198] Length = 208 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R YGPG HGQ+R Y GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQKRGKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR+IF EA+R G+T NL+ +E RLD +VYR F T ARQ Sbjct: 60 KQKAKVMYG-VSEKQFRAIFTEANRLDGNTGENLVRLIERRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V+H H+LV+G+ VNI S+ K+G IEV +KSK + A +L ++ + ++ V+ D Sbjct: 119 LVSHGHILVDGKRVNIPSFFVKQGQKIEVIEKSKNNPQITRAIELTSQTGISPWVDVDKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ L+VE YS+ Sbjct: 179 KRFGIFTRYPEREEVV---IPIEERLIVELYSK 208 >gi|283769109|ref|ZP_06342014.1| ribosomal protein S4 [Bulleidia extructa W1219] gi|283104295|gb|EFC05673.1| ribosomal protein S4 [Bulleidia extructa W1219] Length = 200 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ ++ + R+Y PG HG ++ K S +G QLR KQ+++ Sbjct: 1 MARYTGPVWKKARRLSFSI-LETGEELKKRTYAPGQHGPTKRIKLSGYGTQLREKQRIRN 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++F ++F +A + G N + LESRLD IVYR F T AARQ VNH H Sbjct: 60 MYG-LNERQFHNLFVKASKMDGMAGVNFLVLLESRLDNIVYRMGFARTRKAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ VNI S K G I +K+KS LA V E+ + ++ ++ V+ DN F+ Sbjct: 119 ILVDGKKVNIPSALIKPGQEISLKEKSLNLAIVKESLE-SQISTAAFVEVDKDNKKGKFI 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVE+Y+R Sbjct: 178 RLPDRNE---LNQEINEALVVEYYNR 200 >gi|42518876|ref|NP_964806.1| 30S ribosomal protein S4 [Lactobacillus johnsonii NCC 533] gi|227889735|ref|ZP_04007540.1| 30S ribosomal protein S4 [Lactobacillus johnsonii ATCC 33200] gi|238853696|ref|ZP_04644064.1| ribosomal protein S4 [Lactobacillus gasseri 202-4] gi|268319727|ref|YP_003293383.1| ribosomal protein S4 [Lactobacillus johnsonii FI9785] gi|282851624|ref|ZP_06260989.1| ribosomal protein S4 [Lactobacillus gasseri 224-1] gi|311110502|ref|ZP_07711899.1| ribosomal protein S4 [Lactobacillus gasseri MV-22] gi|61215653|sp|Q74K05|RS4_LACJO RecName: Full=30S ribosomal protein S4 gi|152060955|sp|Q042M7|RS4_LACGA RecName: Full=30S ribosomal protein S4 gi|41583162|gb|AAS08772.1| 30S ribosomal protein S4 [Lactobacillus johnsonii NCC 533] gi|227849599|gb|EEJ59685.1| 30S ribosomal protein S4 [Lactobacillus johnsonii ATCC 33200] gi|238833734|gb|EEQ26003.1| ribosomal protein S4 [Lactobacillus gasseri 202-4] gi|262398102|emb|CAX67116.1| ribosomal protein S4 [Lactobacillus johnsonii FI9785] gi|282557592|gb|EFB63189.1| ribosomal protein S4 [Lactobacillus gasseri 224-1] gi|311065656|gb|EFQ45996.1| ribosomal protein S4 [Lactobacillus gasseri MV-22] Length = 203 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG ++K S +G QL+ KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++F+++F A + R N ++ LE RLD IVYR T ARQ VNH Sbjct: 60 MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY K G I ++ KSK L V +A A P ++S + M T Sbjct: 119 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALD-AVVSRPPFVSFDDSKMTGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + L+VE+Y++ Sbjct: 178 VRLPERDEMEP---EVDEALIVEWYNK 201 >gi|161349358|ref|ZP_02096742.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177'] gi|164601574|gb|EDQ95165.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177'] Length = 206 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K ++ RR +L + ++++ PG+H Q R+ + + +G+QLR KQ Sbjct: 1 MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQ-RRGRTTDYGVQLRMKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 +K+YY + EK+F + +K+ADR +G T NL+ LESRLD +VYR F T ARQ + Sbjct: 60 MIKRYYDVL-EKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFSATRAEARQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 +H+ +LVNG VNI SY+ K GD+IEV+ ++K + A +LA++ P +I V+ M Sbjct: 119 SHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLQIKGALELAQQRAPISWIEVDTKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + P + NLVVE YS+ Sbjct: 179 TGTFKEQPDVAE---LPAEFKVNLVVELYSK 206 >gi|315453711|ref|YP_004073981.1| 30S ribosomal protein S4 [Helicobacter felis ATCC 49179] gi|315132763|emb|CBY83391.1| 30S ribosomal protein S4 [Helicobacter felis ATCC 49179] Length = 208 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K++RR G +L+ + KS ++ R+YGPG HGQ R+ K S +GLQLR Sbjct: 1 MARYRGAVEKLERRFGISLFLKGERRLSGKSALDKRAYGPGQHGQ-RRGKISDYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF+EA+R G+T NL+ LE RLD +VYR F T ARQ Sbjct: 60 KQKAKAMYG-ISEKQFRSIFREANRMEGNTGENLVRLLERRLDNVVYRMGFATTRSFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 V H H+LV+G+ ++I S K G IE+K+KSK+ + A +L + + +I V+ D Sbjct: 119 LVTHGHILVDGKRMDIPSAFIKSGQKIEIKEKSKENPQITRAVELTNQVGIVPWIDVDKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + + ++ L+VE YS+ Sbjct: 179 KKFGIFTRYPERDE---VSLPLEERLIVELYSK 208 >gi|295398656|ref|ZP_06808680.1| 30S ribosomal protein S4 [Aerococcus viridans ATCC 11563] gi|294973091|gb|EFG48894.1| 30S ribosomal protein S4 [Aerococcus viridans ATCC 11563] Length = 203 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S K+ RR+G ++ G K + R Y PG HG R++K S +GLQL+ KQK++ Sbjct: 1 MSRFTGSNWKVSRRLGISISGTGKE-IARRPYAPGEHGNGRRAKLSEYGLQLQEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++EK+F ++F +A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 IYG-MNEKQFANLFVQAGKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I S+R + G VI V++KSK + + EA + VP Y+ + + + + Sbjct: 119 HITVDGKRVDIPSFRVQPGQVISVREKSKDVKVIKEAVEGLYGHVP-YVQFDAEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R+P + + +LVVE+Y++ Sbjct: 178 IRLPQRDE---MNQEIDESLVVEYYNK 201 >gi|284033972|ref|YP_003383903.1| 30S ribosomal protein S4 [Kribbella flavida DSM 17836] gi|283813265|gb|ADB35104.1| ribosomal protein S4 [Kribbella flavida DSM 17836] Length = 202 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G K R Y PG+HG+ R + Y LQLR KQK + Sbjct: 1 MARYTGPMTKKSRRLGVDLVGGDK-AFERRPYPPGMHGRGRPKESEYL-LQLREKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F +KEA R G T NL+ LESRLD +VYRA T ARQ V H H Sbjct: 59 AYGVL-EKQFSLYYKEASRRPGKTGDNLLIILESRLDNVVYRAGLARTRRQARQLVVHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VNG VNI SYR DVI+V+ KS ++ + A + +ER VP ++ + + Sbjct: 118 FTVNGIKVNIPSYRVAAHDVIDVRPKSAEMTPFIIARETHSERVVPAWLEALPERLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + + +L+VE YS+ Sbjct: 178 HQLPTRAQ---IDTQVAEHLIVELYSK 201 >gi|206895668|ref|YP_002247308.1| ribosomal protein S4 [Coprothermobacter proteolyticus DSM 5265] gi|206738285|gb|ACI17363.1| ribosomal protein S4 [Coprothermobacter proteolyticus DSM 5265] Length = 210 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 13/213 (6%) Query: 3 KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAK 55 K +I RR G L+ + PK P+ R++ PG HG R+ K +GL+L+ K Sbjct: 2 KYTGPSCRICRRSGVKLFLKGEKCLSPKCPMERRAFPPGQHGPTRRGKRDTEYGLRLKEK 61 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGD-TSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 QK++ Y I+E + R F A +G T L+ LE RLD +V R F +I AR Sbjct: 62 QKLRHSY-MITETQLRRYFSTAMSQKGVATGTALLQLLERRLDAVVQRMGFASSIKMARN 120 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 +V H HV+VNG+ V+I SY K GD I + + K V ++ + E R E+++V+ + Sbjct: 121 WVRHGHVMVNGKRVDIPSYLVKPGDRITLDKDLKDNPDVQKSIAMNEGRPNLEWLNVDVE 180 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ T++R+PS + PV + L+VE+YSR Sbjct: 181 NLEGTYLRVPSREE---IPVAVNEQLIVEYYSR 210 >gi|57504894|ref|ZP_00370869.1| ribosomal protein S4 [Campylobacter coli RM2228] gi|305432399|ref|ZP_07401561.1| 30S ribosomal protein S4 [Campylobacter coli JV20] gi|57019322|gb|EAL56024.1| ribosomal protein S4 [Campylobacter coli RM2228] gi|304444438|gb|EFM37089.1| 30S ribosomal protein S4 [Campylobacter coli JV20] Length = 208 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R Y PG HG RK K S +GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARRDGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I S+R + G IEV +KSK + A +L A+ + ++ V D Sbjct: 119 LVTHGHILVNGKRVDIPSFRVEAGAKIEVIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + + + ++ +VE YS+ Sbjct: 179 KRFGIFTRKPEREEVI---IPVEERFIVELYSK 208 >gi|300782638|ref|YP_003762929.1| 30S ribosomal protein S4 [Amycolatopsis mediterranei U32] gi|299792152|gb|ADJ42527.1| small subunit ribosomal protein S4 [Amycolatopsis mediterranei U32] Length = 201 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ +I RR+ +L G + R Y PG HG+ R + Y LQ + KQK + Sbjct: 1 MARYTGPATRISRRLKVDLIGGDQ-AFERRPYPPGQHGRGRIKESEYL-LQSQEKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++F +KEA R G T NL+ LESRLD ++YRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFVRYYKEAVRRPGKTGENLLQILESRLDNVIYRAGIARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG VN+ SY+ + D+I+V+ KS + + A + +R +P ++ V N+ Sbjct: 118 FLVNGVKVNVPSYQVTKWDIIDVRPKSFSMLPFVVAKESFGDRPIPAWLQVVQSNLRVLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPVQEQLIVELYSK 201 >gi|300361435|ref|ZP_07057612.1| 30S ribosomal protein S4 [Lactobacillus gasseri JV-V03] gi|300354054|gb|EFJ69925.1| 30S ribosomal protein S4 [Lactobacillus gasseri JV-V03] Length = 208 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG ++K S +G QL+ KQK++ Sbjct: 6 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 64 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++F+++F A + R N ++ LE RLD IVYR T ARQ VNH Sbjct: 65 MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 123 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY K G I ++ KSK L V +A A P ++S + M T Sbjct: 124 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALD-AVVSRPPFVSFDDSKMTGTL 182 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + L+VE+Y++ Sbjct: 183 VRLPGRDEMEP---EVDEALIVEWYNK 206 >gi|134103232|ref|YP_001108893.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338] gi|291007976|ref|ZP_06565949.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338] gi|152112258|sp|A4FPJ3|RS4_SACEN RecName: Full=30S ribosomal protein S4 gi|133915855|emb|CAM05968.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338] Length = 201 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPATRKSRRLKVDLVGGDQ-AFERRPYPPGQHGRARIKETEYL-LQLQEKQKAKF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FRS ++EA+R G T NL+ LE RLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFRSYYEEANRRPGKTGDNLLQVLECRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKS-KQLASVLEASQLAERDVPEYISVNHDNMVATF 179 VNG+ VNI SY+ + D+I+VKQKS ++ + ER VP ++ V N+ Sbjct: 118 FTVNGKKVNIPSYQVSKWDIIDVKQKSLGTTPFIIAKETIGERPVPAWLQVVPSNLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + + L+VE YS+ Sbjct: 178 HQRPERAQ---IDTPVTEQLIVELYSK 201 >gi|68536849|ref|YP_251554.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411] gi|260579207|ref|ZP_05847097.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734] gi|90101685|sp|Q4JTC1|RS4_CORJK RecName: Full=30S ribosomal protein S4 gi|68264448|emb|CAI37936.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411] gi|258602693|gb|EEW15980.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734] Length = 201 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G S R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPVTRKSRRLRVDLVGGDNS-FERRPYPPGQAGRARIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-EKQFRRYYAEANRRPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ VN+ S++ + D+I+V++KS+ + EA + L + VP ++ V + Sbjct: 118 FTVNGKKVNVPSFKVSQYDIIDVREKSRSMLWFEEAQEALVDTIVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVELYSK 201 >gi|325282667|ref|YP_004255208.1| ribosomal protein S4 [Deinococcus proteolyticus MRP] gi|324314476|gb|ADY25591.1| ribosomal protein S4 [Deinococcus proteolyticus MRP] Length = 206 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 M + S K RR G NL K ++ R Y PG HGQRR + +PS + ++LR KQK Sbjct: 1 MGRFSGSIVKQSRREGINLAETEKVQKYLDRRPYAPGQHGQRRGRGRPSDYSVRLREKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + + YG ++EK+FR++F+EA R G + LE RLD +V+R F T ARQFV Sbjct: 61 LSRLYG-MNEKQFRNLFEEATRQPGVLGTVFLQLLERRLDNVVFRMGFASTRRQARQFVG 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE-YISVNHDNMV 176 H H+LVNG+ V+I SYR K GD I V +KS+ + V E + +R P ++ VN + Sbjct: 120 HGHILVNGKKVDIASYRVKIGDEITVAEKSRSMGFVQENMEAMKRRRPSPWLEVNAETFT 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF R+P+ + + N ++E+YSR Sbjct: 180 GTFNRLPAR---EDLALPINENFIIEYYSR 206 >gi|71277977|ref|YP_267375.1| 30S ribosomal protein S4 [Colwellia psychrerythraea 34H] gi|90101683|sp|Q488Y9|RS4_COLP3 RecName: Full=30S ribosomal protein S4 gi|71143717|gb|AAZ24190.1| ribosomal protein S4 [Colwellia psychrerythraea 34H] Length = 206 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG R+ + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIETIPGQHGA-RRGRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ +G + EK+F + +KEA R +G+T NL+ LE+RLD +VYR + T ARQ V Sbjct: 60 KVRRIFGVL-EKQFSNYYKEAARQKGNTGENLLQLLETRLDNVVYRMGYASTRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ ++VNG VNI S+ K D + V++KSK A ++ A +LA +R+ P ++ V+ + Sbjct: 119 SHKAIVVNGVVVNIPSFTVKAEDTVSVREKSKTQARIIAALELADQREKPLWVEVDTKKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + L+VE YS+ Sbjct: 179 EGVFKRVPDRAD---LSAEINEQLIVELYSK 206 >gi|222823138|ref|YP_002574711.1| 30S ribosomal protein S4 [Campylobacter lari RM2100] gi|254764576|sp|B9KEH5|RS4_CAMLR RecName: Full=30S ribosomal protein S4 gi|222538359|gb|ACM63460.1| 30S ribosomal protein S4 [Campylobacter lari RM2100] Length = 208 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR+G +L + KS ++ R Y PG HGQ RK+K S +GLQLR Sbjct: 1 MARYRGPVEKLERRLGVSLAMKGERRLAGKSALDKRPYAPGQHGQ-RKAKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARKDGNTGALLIQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I SYR + G IEV +KSK + A +L A+ + ++ V D Sbjct: 119 LVTHGHILVNGKRVDIPSYRVEAGQKIEVIEKSKNNPQISRAIELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + + + ++ +VE YS+ Sbjct: 179 KRFGIFTRKPEREEVI---IPVEERYIVELYSK 208 >gi|212218098|ref|YP_002304885.1| 30S ribosomal protein S4 [Coxiella burnetii CbuK_Q154] gi|226697829|sp|B6J5F6|RS4_COXB1 RecName: Full=30S ribosomal protein S4 gi|212012360|gb|ACJ19740.1| SSU ribosomal protein S4P [Coxiella burnetii CbuK_Q154] Length = 206 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K ++ RR +L + ++++ PG+H Q R+ + + +G+QLR KQ Sbjct: 1 MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQ-RRGRTTDYGVQLRMKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 +K+YY + EK+F + +K+ADR +G T NL+ LESRLD +VYR F T ARQ + Sbjct: 60 MIKRYYDVL-EKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFSATRAEARQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175 +H+ +LVNG VNI SY+ K GD+IEV+ ++K + A +LA++ P +I V+ M Sbjct: 119 SHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLRIKGALELAQQRAPISWIEVDTKKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF P + P + NLVVE YS+ Sbjct: 179 TGTFKEQPDVAE---LPAEFKVNLVVELYSK 206 >gi|297159624|gb|ADI09336.1| 30S ribosomal protein S4 [Streptomyces bingchenggensis BCW-1] Length = 208 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 108/213 (50%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR + L+ + K P+ R Y PG HG+ R Y LQLR Sbjct: 1 MARYTGADCKRCRREKQKLFLKGSKCESAKCPIEIRPYPPGEHGRGRTKDSEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR + EA++ G T NL+ LESRLD +VYRA F + ARQ Sbjct: 60 KQKATRIYGVL-EKQFRGYYAEANKKTGKTGENLLRILESRLDNVVYRAGFAKSRDHARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H+ VNGR +I S R D+IEV+ KS+ L A ++ ER VP ++ Sbjct: 119 LVRHGHINVNGRKTDIPSARVAVNDIIEVRPKSRTLTPFQVAQAEAGERTVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +Q L+VE YS+ Sbjct: 179 QLRILVHSLPERQ---VIDTQVQEQLIVELYSK 208 >gi|307328057|ref|ZP_07607238.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113] gi|306886362|gb|EFN17367.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113] Length = 208 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR + L+ + K P+ R Y PG HG+ R Y LQLR Sbjct: 1 MARYTGADCKRCRREKQKLFLKGSKCESAKCPIEIRPYPPGEHGRGRTKDSEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR + EA++ G T NL+ LE+RLD +VYRA F + ARQ Sbjct: 60 KQKATRIYGVL-EKQFRGYYAEANKKSGKTGENLLRILETRLDNVVYRAGFAKSRDHARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H+ VNGR +I S R D+IEV+ KS+ L A ++ ER VP ++ Sbjct: 119 LVRHGHITVNGRKTDIPSARVTVNDIIEVRTKSRTLTPFQVAQAEAGERTVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +Q L+VE YS+ Sbjct: 179 QLRILVHSMPERQ---VIDTQVQEQLIVELYSK 208 >gi|269836359|ref|YP_003318587.1| 30S ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745] gi|269785622|gb|ACZ37765.1| ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745] Length = 203 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTR-SYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M++ KHKI RR G NL G + R PG H R + + +G QLR KQK+K Sbjct: 1 MARYTGPKHKISRREGINLTGTRSRSLERRLKTPPGAHAHARPRRMTEYGRQLREKQKLK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +++G + EK+FR F++A RS+ T L+ LESRLD +VYR F PT ARQ VNH Sbjct: 61 RHFGML-EKQFRRTFQDARRSKEPTGTALVKLLESRLDNVVYRLGFTPTRPMARQLVNHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HVLVNGR V+I SYR GD I + +K+ ++ V EA Q A +P ++S V Sbjct: 120 HVLVNGRRVDIPSYRVSPGDTIALTEKAAEIPDVQEALQDAGHQIPSWLSREGTQPVGRV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ +++ PV ++ L++ FY+R Sbjct: 180 ISEPN-PEELDIPVDIE--LIIAFYAR 203 >gi|57238607|ref|YP_179738.1| 30S ribosomal protein S4 [Campylobacter jejuni RM1221] gi|148925738|ref|ZP_01809426.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CG8486] gi|205355608|ref|ZP_03222378.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CG8421] gi|81675536|sp|Q5HSJ7|RS4_CAMJR RecName: Full=30S ribosomal protein S4 gi|57167411|gb|AAW36190.1| ribosomal protein S4 [Campylobacter jejuni RM1221] gi|145845748|gb|EDK22839.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CG8486] gi|205346385|gb|EDZ33018.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CG8421] gi|315059045|gb|ADT73374.1| SSU ribosomal protein S4p [Campylobacter jejuni subsp. jejuni S3] Length = 208 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R Y PG HG RK K S +GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNG+ V+I S+R + G IE+ +KSK + A +L A+ + ++ V D Sbjct: 119 LVTHGHILVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208 >gi|108798084|ref|YP_638281.1| 30S ribosomal protein S4 [Mycobacterium sp. MCS] gi|119867180|ref|YP_937132.1| 30S ribosomal protein S4 [Mycobacterium sp. KMS] gi|126433744|ref|YP_001069435.1| 30S ribosomal protein S4 [Mycobacterium sp. JLS] gi|123070558|sp|Q1BD09|RS4_MYCSS RecName: Full=30S ribosomal protein S4 gi|152112233|sp|A3PVL7|RS4_MYCSJ RecName: Full=30S ribosomal protein S4 gi|152112234|sp|A1UBY4|RS4_MYCSK RecName: Full=30S ribosomal protein S4 gi|108768503|gb|ABG07225.1| SSU ribosomal protein S4P [Mycobacterium sp. MCS] gi|119693269|gb|ABL90342.1| SSU ribosomal protein S4P [Mycobacterium sp. KMS] gi|126233544|gb|ABN96944.1| SSU ribosomal protein S4P [Mycobacterium sp. JLS] Length = 201 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G +S R Y PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPATRKSRRLGVDLVGGDQS-FEKRPYPPGQHGRARIKESEYR-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-EKQFRRYYDEANRQPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG V+I SYR + D+I+V++KS + A + A +R +P ++ V + Sbjct: 118 FTVNGVKVDIPSYRVSQYDIIDVREKSLNTDPFVIARETAGDRPIPSWLQVVGERQRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVELYSK 201 >gi|301057497|ref|ZP_07198593.1| ribosomal protein S4 [delta proteobacterium NaphS2] gi|300448425|gb|EFK12094.1| ribosomal protein S4 [delta proteobacterium NaphS2] Length = 209 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR L+ + K R+Y PG HGQRR K S + QLR Sbjct: 1 MARYRDSSCRLCRRENLKLFLKGDRCYGDKCAFERRAYAPGQHGQRRGGKLSDYSQQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG I EK+F+ + A+R +G T NL+ LESRLD +VY+ F + ARQ Sbjct: 61 KQKVKRIYG-ILEKQFKGYYYRAERQKGITGTNLLLLLESRLDNVVYKMGFAASRTQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 + H H LVN + VNI SY+ K GDV+E K+KS++++ ++EA + R VP ++ V + Sbjct: 120 LIRHNHFLVNQKKVNIPSYQVKVGDVVEAKEKSREVSQIIEAMETVVRRGVPGWMEVEKE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ +D+ P +Q L+VE YS+ Sbjct: 180 AFKGMMKGLPNR-EDLTMP--IQEQLIVELYSK 209 >gi|255324778|ref|ZP_05365892.1| ribosomal protein S4 [Corynebacterium tuberculostearicum SK141] gi|311740031|ref|ZP_07713865.1| 30S ribosomal protein S4 [Corynebacterium pseudogenitalium ATCC 33035] gi|255298253|gb|EET77556.1| ribosomal protein S4 [Corynebacterium tuberculostearicum SK141] gi|311305104|gb|EFQ81173.1| 30S ribosomal protein S4 [Corynebacterium pseudogenitalium ATCC 33035] Length = 201 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++ RR+ +L G R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFRRYYAEANRLPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+++N+ SY+ + D+I+V+ +SK++ +A L + +VP ++ V D + Sbjct: 118 FTVNGKNINVPSYKVTQYDIIDVRDRSKKMEWFEDAQDALIDANVPAWLQVVPDTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVELYSK 201 >gi|329667577|gb|AEB93525.1| 30S ribosomal protein S4 [Lactobacillus johnsonii DPC 6026] Length = 203 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG ++K S +G QL+ KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E++F+++F A + R N ++ LE RLD IVYR T ARQ VNH Sbjct: 60 MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I SY K G I ++ KSK L V +A A P ++S + M T Sbjct: 119 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALN-AVVSRPPFVSFDDSKMTGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + L+VE+Y++ Sbjct: 178 VRLPERDEMEP---EVDEALIVEWYNK 201 >gi|257454070|ref|ZP_05619344.1| ribosomal protein S4 [Enhydrobacter aerosaccus SK60] gi|257448548|gb|EEV23517.1| ribosomal protein S4 [Enhydrobacter aerosaccus SK60] Length = 213 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 17/218 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-----SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + PG HG R Y QLR K Sbjct: 1 MARYLGPKLKLSRREGTDLQLKSGVKAYEEKTKKADRAPGQHGNPRSKTSEYSA-QLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K+ YG + E++F + +KEA R +G T NL+ LE RLD +VYR F T ARQ Sbjct: 60 QKVKRIYGVL-ERQFSNYYKEAARMKGATGENLLQMLERRLDNVVYRMGFGATRAEARQL 118 Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168 V+HR +LV VNI S + ++GDVI V +K+K+ + A +LA +R P ++ Sbjct: 119 VSHRAILVKKAGRDEFVRVNIPSIQLQDGDVIAVHEKAKEQLRIKNAIELAGQRGTPVWL 178 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+H + TF + P P + +L+VE YS+ Sbjct: 179 EVDHSKLQGTFKQAPERAD---LPTEINESLIVELYSK 213 >gi|269959011|ref|YP_003328800.1| 30S ribosomal protein S4 [Anaplasma centrale str. Israel] gi|269848842|gb|ACZ49486.1| 30S ribosomal protein S4 [Anaplasma centrale str. Israel] Length = 222 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 2/198 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G NLWGR K P NTR+Y PG HG K S FG Q A QK K YY +S Sbjct: 26 KYRASRRLGVNLWGRSKDPFNTRNYPPGQHGSMGYKKLSSFGKQFAAHQKFKCYYA-MSS 84 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ R+ F A +GDT NL+ LESRL +VY A FVPTIF+ARQ V+H+HV VNG+ Sbjct: 85 RQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTIFSARQLVSHKHVTVNGKV 144 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI S+ K GDV+++++++ +L VL A Q ER VP+++ V+ + A ++R+P + Sbjct: 145 VNIPSFSVKPGDVVQIRERASELPMVLAAIQSQERRVPDHLEVDTEQRSARYLRVPKYCE 204 Query: 188 DVPYPVIMQPNLVVEFYS 205 VPYP M+ NLVVEFYS Sbjct: 205 -VPYPANMEVNLVVEFYS 221 >gi|86608572|ref|YP_477334.1| 30S ribosomal protein S4 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123502848|sp|Q2JMH0|RS4_SYNJB RecName: Full=30S ribosomal protein S4 gi|86557114|gb|ABD02071.1| ribosomal protein S4 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 203 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 9/208 (4%) Query: 1 MSKRESSKHKIDRRIG--ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ + KI RR G + K P NT PG+HG RK K Y ++L KQK+ Sbjct: 1 MSRYTGPRLKIIRRFGGLDLPGLTRKRPKNT--NPPGMHGAERKKKSEY-AIRLEEKQKV 57 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SE++ ++A RS+G T L+ LE RLD IV+R PTI AARQ V+H Sbjct: 58 RFNYG-LSERQMIRYMRKARRSKGSTGLALLQMLEMRLDCIVFRLGMAPTIPAARQLVSH 116 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+ VNG+ V I SY CK GDVI VK K V ++ +P+Y+ + + + Sbjct: 117 GHIEVNGQKVTIPSYGCKVGDVITVKNKESSRKLVAAYAEYPGLFLPDYLEFDKEKLRGR 176 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + + LVVEFYSR Sbjct: 177 IKELPPREQ---ICAPVNELLVVEFYSR 201 >gi|144143|gb|AAC05398.1| ribosomal protein S4 [Buchnera aphidicola] gi|448400|prf||1917188A ribosomal protein S4 Length = 206 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S + QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGFRSIDSKCKLEHPPGQHG-VRKPRLSDYAYQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR +K+A RS+G+T NL+ LE RLD +VYR F T +RQ + Sbjct: 60 KVRRLYGVL-ERQFRIYYKKASRSKGNTGENLLQLLERRLDNVVYRMGFGCTRSESRQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ + VN VNI SY+ D I V+ KSK + + A +L E R+ +I V+ M Sbjct: 119 SHKSIKVNNNIVNIASYQISPNDRISVRDKSKNQSRIKAALELTEQREKLMWIEVDVTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + +L+VE YS+ Sbjct: 179 EGIFKRFPERSD---LSAEINEHLIVELYSK 206 >gi|320335497|ref|YP_004172208.1| 30S ribosomal protein S4 [Deinococcus maricopensis DSM 21211] gi|319756786|gb|ADV68543.1| ribosomal protein S4 [Deinococcus maricopensis DSM 21211] Length = 205 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 123/209 (58%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + S K RR G NL K ++ R Y PG HGQRRK +PS + ++LR KQK+ Sbjct: 1 MGRFRGSITKQSRREGINLAETEKVQKYLDRRPYAPGQHGQRRKGRPSDYSVRLREKQKL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SEK+FR++F+EA G T + FLE RLD +++R T ARQFV H Sbjct: 61 ARLYG-VSEKQFRNLFEEAANIPGVTGTVFLQFLERRLDNVIFRLGIASTRRQARQFVAH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 H+LVNG+ +++ SYR K GDVI V ++S+Q +LE + A+ R V ++ N + Sbjct: 120 GHILVNGKLLDVPSYRVKIGDVITVAERSRQNGFILENMEAAKRRRVSPWLEFNTETFTG 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +FVR+P+ + + N ++EFYSR Sbjct: 180 SFVRLPAR---EDLALPINENFIIEFYSR 205 >gi|33519682|ref|NP_878514.1| 30S ribosomal protein S4 [Candidatus Blochmannia floridanus] gi|41017831|sp|Q7VQC4|RS4_BLOFL RecName: Full=30S ribosomal protein S4 gi|33517345|emb|CAD83730.1| 30S ribosomal subunit protein S4 [Candidatus Blochmannia floridanus] Length = 207 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR +L+ + ++++ + PG H RKS+ S +G+QLR KQ Sbjct: 1 MAKYVGPKLKLSRRENTDLFLKSGIRSIDSKCQFDHAPGQH-SIRKSRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG I E +F + ++++ +G+T L+ LESRLD +VYR F T +RQ V Sbjct: 60 KVKRMYG-ILENQFANYYRKSASMKGNTGEILLQLLESRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174 +H+ ++VN VNI SY+ VI+V +KS + + A ++AE R+ +I V+ Sbjct: 119 SHKSIIVNDCIVNIASYQVVPNTVIQVYKKSHNQSRIYAALEIAEQQRESVPWIEVDSAK 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R P + + +L+VE YS+ Sbjct: 179 LKGIFKRRPERSE---LSANINEHLIVELYSK 207 >gi|21672746|ref|NP_660813.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654271|sp|P41186|RS4_BUCAP RecName: Full=30S ribosomal protein S4 gi|21623392|gb|AAM68024.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 206 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S + +QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGFRSIDSKCKLEHPPGQHG-VRKPRLSDYAIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR +K+A RS+G+T NL+ LE RLD +VYR F T +RQ + Sbjct: 60 KVRRLYGVL-ERQFRIYYKKASRSKGNTGENLLQLLERRLDNVVYRMGFGCTRSESRQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ + VN VNI SY+ D I V+ KSK + + A +L E R+ +I VN M Sbjct: 119 SHKSIKVNNNIVNIASYQISPNDRISVRDKSKNQSRIKAALELTEQREKLMWIEVNVTKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + +L+VE YS+ Sbjct: 179 EGIFKRFPERSD---LSAEINEHLIVELYSK 206 >gi|153004799|ref|YP_001379124.1| 30S ribosomal protein S4 [Anaeromyxobacter sp. Fw109-5] gi|171769305|sp|A7HBP4|RS4_ANADF RecName: Full=30S ribosomal protein S4 gi|152028372|gb|ABS26140.1| RNA-binding S4 domain protein [Anaeromyxobacter sp. Fw109-5] Length = 208 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR ++ + K + R Y PG HGQ R K S +G+QLR Sbjct: 1 MARYNESVCRLCRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGR-VKFSEYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E FR ++ A ++G T NL+ LE RLD +V+R F T ARQ Sbjct: 60 KQKVKRMYG-LLEAGFRHAYQNAAAAKGKTGENLLQTLELRLDNVVFRLGFADTRNEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H VNGR VNI SY C+ GD +E++ +S+++ + EA + + R VP ++ ++ Sbjct: 119 LVRHGHFKVNGRKVNIPSYLCRAGDKVELRDRSRKVVRISEALEAVDRRGVPGWLELDKG 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T PS +D+ P +Q L+VE YS+ Sbjct: 179 GFKGTVRTQPSR-EDITMP--IQEQLIVELYSK 208 >gi|227832272|ref|YP_002833979.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975] gi|262183872|ref|ZP_06043293.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975] gi|254764581|sp|C3PL37|RS4_CORA7 RecName: Full=30S ribosomal protein S4 gi|227453288|gb|ACP32041.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975] Length = 201 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++ RR+ +L G R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR + EA+R G T NL+ LESRLD ++YRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFRRYYAEANRLPGKTGDNLVVLLESRLDNVIYRAGLANTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ +N+ S+R + D+I+V+++S+++ EA L + +VP ++ V D + Sbjct: 118 FTVNGKKINVPSFRVTQYDIIDVRERSQKMEWFEEAQDRLVDANVPAWLQVVPDTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201 >gi|227505245|ref|ZP_03935294.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940] gi|227198144|gb|EEI78192.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940] Length = 201 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++ RR+ +L G R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFRRYYAEANRRPGKTGDNLVVLLESRLDNVVYRAGLANTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ +N+ S++ + D+I+V+++S+++ +A L + +VP ++ V D + Sbjct: 118 FTVNGKKINVPSFQVSQYDIIDVRERSQKMEWFEDAQDRLVDANVPAWLQVVPDTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201 >gi|90655388|gb|ABD96229.1| 30S ribosomal protein S4 [uncultured marine type-A Synechococcus GOM 3M9] Length = 202 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V+VNGR +I SY+CK GDVI ++++ + ++P ++ ++ + A Sbjct: 117 VMVNGRVTDIASYQCKTGDVIAIRERKGSKKLAEGNLEFPGLANIPPHMELDKTKLTAKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V + + + LVVE+YSR Sbjct: 177 V---GKCEREWVALEINELLVVEYYSR 200 >gi|259046817|ref|ZP_05737218.1| 30S ribosomal protein S4 [Granulicatella adiacens ATCC 49175] gi|259036440|gb|EEW37695.1| 30S ribosomal protein S4 [Granulicatella adiacens ATCC 49175] Length = 203 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG + K S +G QL+ KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGISLSGTGKE-IARRPYAPGQHGPNSRKKLSEYGQQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++FK+A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFATLFKKAGKIKEGKHGENFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VNG+ V+I S++ + GDV+ V++KS+ L + EA + A PE+++ + + + + Sbjct: 119 HITVNGKRVDIPSFQVQVGDVVGVREKSRNLTIIKEALE-ALYGRPEFVTFDEEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +LVVE+Y++ Sbjct: 178 NRLPLRDELTS---EVDESLVVEYYNK 201 >gi|162456220|ref|YP_001618587.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56'] gi|161166802|emb|CAN98107.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56'] Length = 209 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G L+ + K R Y PG HGQ R Y ++LR Sbjct: 1 MARYIGPVCKLCRREGMKLYLKGERCYSEKCAYTRRPYPPGQHGQGRIKLSEY-AVRLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E++F F+EA+R +G T ++ LE RLD +V+R F + ARQ Sbjct: 60 KQKVRRIYGVL-ERQFSGYFQEANRRKGRTGEEMLGLLERRLDNVVHRMGFGSSRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H HV VNG+ ++I SY + GD +E+ + +++ SVL + A +R V +I V+ Sbjct: 119 LVRHGHVHVNGKRLDIPSYVVRAGDRVELTEGARKFKSVLASIGGADKRPVASWIDVDRA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P +D+ P ++ LVVE+YSR Sbjct: 179 AFTGAIKGAPIR-EDLNEP-EIREQLVVEYYSR 209 >gi|269128486|ref|YP_003301856.1| 30S ribosomal protein S4 [Thermomonospora curvata DSM 43183] gi|268313444|gb|ACY99818.1| ribosomal protein S4 [Thermomonospora curvata DSM 43183] Length = 209 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR L+ + PK P+ R Y PG HG+ R + Y LQLR Sbjct: 1 MARYTGADCKLCRREKMKLFLKGSKCEGPKCPIEIRPYPPGEHGRGRPKETEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+F + ++ A+R G T L+ LE RLD +VYRA F + ARQ Sbjct: 60 KQKARRIYGVL-EKQFHNYYEIANRKSGKTGDVLLQLLERRLDNVVYRAGFAKSRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYIS-VNH 172 + H H VNGR V+I S+ E DVIEVK KS +L + A ++ ER P ++ + Sbjct: 119 LIRHGHFKVNGRKVDIPSFLVSENDVIEVKPKSHELTPFVVARAEAGERQTPAWLEAITE 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ + +Q L+VE YS+ Sbjct: 179 PTMRILIHSLPTRQQ---IDTPVQEQLIVELYSK 209 >gi|54022803|ref|YP_117045.1| 30S ribosomal protein S4 [Nocardia farcinica IFM 10152] gi|61215422|sp|Q5Z1L0|RS4_NOCFA RecName: Full=30S ribosomal protein S4 gi|54014311|dbj|BAD55681.1| putative ribosomal protein S4 [Nocardia farcinica IFM 10152] Length = 201 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R +G T NL+ LE+RLD +VYRA T ARQ V+H H Sbjct: 59 SYG-VMEKQFRRYYEEANRQKGKTGDNLLRLLETRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG V++ SYR + D+I+VK+KS A + L ER VP ++ V + Sbjct: 118 FLVNGVKVDVPSYRVSQYDIIDVKEKSLSTLPFQVARETLGERPVPGWLQVLPGRLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + V +Q L+VE+YS+ Sbjct: 178 HQEPERAQ---IDVPLQEQLIVEYYSK 201 >gi|86152218|ref|ZP_01070429.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 260.94] gi|86153129|ref|ZP_01071334.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612243|ref|YP_001001237.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81-176] gi|153952009|ref|YP_001398874.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. doylei 269.97] gi|157415814|ref|YP_001483070.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81116] gi|167006130|ref|ZP_02271888.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81-176] gi|283956978|ref|ZP_06374450.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 1336] gi|152060941|sp|A1W1J6|RS4_CAMJJ RecName: Full=30S ribosomal protein S4 gi|171769457|sp|A7H5U4|RS4_CAMJD RecName: Full=30S ribosomal protein S4 gi|172047193|sp|A8FNQ6|RS4_CAMJ8 RecName: Full=30S ribosomal protein S4 gi|85840707|gb|EAQ57958.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 260.94] gi|85844014|gb|EAQ61224.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249805|gb|EAQ72764.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81-176] gi|152939455|gb|ABS44196.1| ribosomal protein S4 [Campylobacter jejuni subsp. doylei 269.97] gi|157386778|gb|ABV53093.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81116] gi|283791479|gb|EFC30276.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 1336] gi|307748451|gb|ADN91721.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni M1] gi|315931273|gb|EFV10243.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 327] Length = 208 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R Y PG HG RK K S +GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLVNG+ V+I S+R + G IE+ +KSK + A +L A+ + ++ V D Sbjct: 119 LVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208 >gi|118626141|emb|CAL39368.1| small ribosomal protein 4 [Lophozia ventricosa var. silvicola] Length = 202 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKMKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|57242510|ref|ZP_00370448.1| ribosomal protein S4 [Campylobacter upsaliensis RM3195] gi|315639080|ref|ZP_07894248.1| 30S ribosomal protein S4 [Campylobacter upsaliensis JV21] gi|57016795|gb|EAL53578.1| ribosomal protein S4 [Campylobacter upsaliensis RM3195] gi|315480856|gb|EFU71492.1| 30S ribosomal protein S4 [Campylobacter upsaliensis JV21] Length = 208 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 115/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R Y PG HG RR Y GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGARRGKISEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARKEGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LVNGR V+I S+R + G IEV +KSK + A L A+ + ++ V D Sbjct: 119 LVTHGHILVNGRRVDIPSFRVEAGAKIEVAEKSKNNPQISRAIDLTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KRYGIFTRKPEREEVV---IPVEERFIVELYSK 208 >gi|86149496|ref|ZP_01067727.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596172|ref|ZP_01099409.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 84-25] gi|218563183|ref|YP_002344963.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|26399526|sp|Q9PM81|RS4_CAMJE RecName: Full=30S ribosomal protein S4 gi|85840278|gb|EAQ57536.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191013|gb|EAQ94985.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360890|emb|CAL35691.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926789|gb|ADC29141.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni IA3902] gi|315927660|gb|EFV06991.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929465|gb|EFV08662.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 305] Length = 208 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R Y PG HG RK K S +GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD IVYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNIVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLVNG+ V+I S+R + G IE+ +KSK + A +L A+ + ++ V D Sbjct: 119 LVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208 >gi|315125002|ref|YP_004067006.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018724|gb|ADT66817.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 208 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R Y PG HG RK K S +GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARREGNTGILLIQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLVNG+ V+I S+R + G IE+ +KSK + A +L A+ + ++ V D Sbjct: 119 LVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208 >gi|296113774|ref|YP_003627712.1| 30S ribosomal protein S4 [Moraxella catarrhalis RH4] gi|295921468|gb|ADG61819.1| 30S ribosomal protein S4 [Moraxella catarrhalis RH4] gi|326562119|gb|EGE12447.1| 30S ribosomal protein S4 [Moraxella catarrhalis 7169] gi|326564516|gb|EGE14742.1| 30S ribosomal protein S4 [Moraxella catarrhalis 46P47B1] gi|326566268|gb|EGE16420.1| 30S ribosomal protein S4 [Moraxella catarrhalis 103P14B1] gi|326567080|gb|EGE17202.1| 30S ribosomal protein S4 [Moraxella catarrhalis BC1] gi|326568344|gb|EGE18424.1| 30S ribosomal protein S4 [Moraxella catarrhalis BC7] gi|326572245|gb|EGE22240.1| 30S ribosomal protein S4 [Moraxella catarrhalis BC8] gi|326574587|gb|EGE24527.1| 30S ribosomal protein S4 [Moraxella catarrhalis O35E] gi|326574843|gb|EGE24773.1| 30S ribosomal protein S4 [Moraxella catarrhalis 101P30B1] gi|326576167|gb|EGE26082.1| 30S ribosomal protein S4 [Moraxella catarrhalis CO72] Length = 213 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 17/218 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + ++ PG HG + Y QLR K Sbjct: 1 MARYIGPKLKLSRREGTDLQLKSGVKPYDVKTKKAGRVPGQHGNSQNKTSEYAS-QLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K+ YG + E++F + +KEA R RG T NL+ LE RLD +VYR F T ARQ Sbjct: 60 QKVKRMYGVL-ERQFSNYYKEAARERGATGENLLVTLERRLDNVVYRMGFGATRAEARQL 118 Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168 V+HR +++ VNI S + ++GDVI V +KSK+ + A +LA +R +P ++ Sbjct: 119 VSHRAIMLKKAGRDEFVRVNIPSIQVQDGDVIAVHEKSKEQLRIKNAVELATQRGIPAWL 178 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+H + TF P + P + NL+VE YS+ Sbjct: 179 EVDHSKLQGTFKSAPERSE---LPAEINENLIVELYSK 213 >gi|300932967|ref|ZP_07148223.1| 30S ribosomal protein S4 [Corynebacterium resistens DSM 45100] Length = 201 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G S R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPVTRKSRRLRVDLVG-GDSSFERRPYPPGQAGRARIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFRRYYAEANRRPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ N+ S+R + D+I+V++KS+ + EA + L + VP ++ V + Sbjct: 118 FTVNGKKTNVPSFRVTQYDIIDVREKSRSMLWFEEAQERLVDAVVPAWLQVVPATLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVELYSK 201 >gi|295099742|emb|CBK88831.1| SSU ribosomal protein S4P [Eubacterium cylindroides T2-87] Length = 202 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 4/206 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S K RR+G ++ + R+Y PG HG R++K + +GLQL+ KQ+++ Sbjct: 1 MSRNTGSTWKKSRRLGFSI-LETGEELTRRNYVPGQHGNARRAKLTNYGLQLQEKQRIRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SEK+F + + +A + G + NL+ LESRLD +VYR F T ARQ VNH H Sbjct: 60 TY-QLSEKQFYNTYIKASKRPGPSGENLLVMLESRLDNLVYRMGFARTRRGARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I SY+ K G VIEV+++ K ++ V EA + A V ++ V+ +N T+V Sbjct: 119 ILVNGKKVDIPSYQVKPGTVIEVRERDKNMSVVAEALEAATTRV-AFVEVDAENKKGTYV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + LVVEFY+R Sbjct: 178 RYPERNELFTAQ-PINELLVVEFYNR 202 >gi|26399200|sp|Q9SMG1|RR4_FUNHY RecName: Full=30S ribosomal protein S4, chloroplastic gi|6015522|emb|CAB57798.1| small ribosomal protein 4 [Funaria hygrometrica] Length = 201 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S Q K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGVLPGLTNKTPQLKSSSP----NQSAAKKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VLVN V+I SYRCK D I VK + K A + + +++ VP +++ + Sbjct: 116 VLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKAKVPNHLTFDSTQKKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 176 NQI---LDRESIGLKINELLVVEYYSR 199 >gi|311744779|ref|ZP_07718575.1| 30S ribosomal protein S4 [Aeromicrobium marinum DSM 15272] gi|311311896|gb|EFQ81817.1| 30S ribosomal protein S4 [Aeromicrobium marinum DSM 15272] Length = 202 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+G +L G + R Y PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPLTKKSRRLGVDLVG-GDAAFERRPYPPGQHGRTRIKESEYR-TQLQEKQKARY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++ A R G T NL++ LESRLD +VYR+ T ARQ V H H Sbjct: 59 TYGVL-EKQFRRYYELASRRPGKTGDNLLTMLESRLDNVVYRSGLARTRRHARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 LVNG NI S++ + D+I+VK KS + + A + + D VP ++ V+ Sbjct: 118 FLVNGVKTNIPSFQVSKFDIIDVKPKSLETTPFIIARETHDSDTVPAWLDVSPTRGRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + V +Q L+VE+YS+ Sbjct: 178 HQQPVREQ---ITVPIQEQLIVEYYSK 201 >gi|38233157|ref|NP_938924.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae NCTC 13129] gi|61215596|sp|Q6NJ64|RS4_CORDI RecName: Full=30S ribosomal protein S4 gi|38199416|emb|CAE49059.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae] Length = 201 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-EKQFRRYYAEANRLPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ +N+ SYR + D+I+V++KS+++ EA + L + VP ++ V + Sbjct: 118 FTVNGKKINVPSYRVSQYDIIDVREKSQKMIWFEEAQENLLDAVVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201 >gi|332181992|gb|AEE17680.1| ribosomal protein S4 [Treponema brennaborense DSM 12168] Length = 211 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 9/213 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ R + L + K P+N + PG + R K S +G+QLR Sbjct: 1 MARYTGPVCRLCRTEQKKLCLKGDRCKSDKCPINKKRGAPGKDPKARTGKKSEYGVQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQKMK+ YG + EK+F F+ A R G T NLI LESRLD +V+R F + ARQ Sbjct: 61 KQKMKRIYGML-EKQFHLTFEHAQRMPGVTGDNLICLLESRLDNVVFRMHFASSRTQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173 V H H+LVNG+SVNI SY + GDV+EVK+ SK+L +L+A ++++ V +I+++ D Sbjct: 120 LVLHGHILVNGKSVNIPSYEVRPGDVVEVKENSKKLTVILDALKEVSKSGVMPWINLDVD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P ++ + ++ LVVE YS+ Sbjct: 180 AQKGVYTAKPRRVEVIDL-ADIKEQLVVELYSK 211 >gi|325126867|ref|YP_004286104.1| ribosomal protein S4 [Fragaria vesca subsp. vesca] gi|324022779|gb|ADY15353.1| ribosomal protein S4 [Fragaria vesca subsp. vesca] Length = 201 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKP----RAGSDLRTQSRPGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I V+ + K A + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVRDEQKSKALIQNYLGSSPPEELPKHLTLDPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|315653729|ref|ZP_07906649.1| 30S ribosomal protein S4 [Lactobacillus iners ATCC 55195] gi|315489091|gb|EFU78733.1| 30S ribosomal protein S4 [Lactobacillus iners ATCC 55195] Length = 208 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG ++K S +G QL+ KQK++ Sbjct: 6 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPGNRTKVSEYGEQLKEKQKLRW 64 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +G ++E+++R++F A + R N + LE RLD +VYR T ARQ VNH Sbjct: 65 MFG-LNERQYRNLFVLAGKIREGKHGVNFMIMLEKRLDNVVYRLGLATTREQARQLVNHG 123 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ V+I S++ K G I +K+KSK L V +A + A P +++ + M + Sbjct: 124 HILVDGKRVDIPSFQVKVGQEISLKEKSKNLQQVKDALE-ATVSRPAFVTFDESKMTGSL 182 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +LVVE+Y++ Sbjct: 183 VRLPERDEMEP---EIDESLVVEWYNK 206 >gi|33239861|ref|NP_874803.1| 30S ribosomal protein S4 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|41017828|sp|Q7VDG7|RS4_PROMA RecName: Full=30S ribosomal protein S4 gi|33237387|gb|AAP99455.1| Ribosomal protein S4 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 202 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K+ RS PG HG R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLTRKAA--KRSNPPGQHGNARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE++ K+A G T NL+ LE RLD + +R F PTI +RQ VNH H Sbjct: 58 NYG-ISERQLVRYVKKARAMEGSTGTNLLKLLEGRLDNVCFRLGFGPTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG++++I SY+CK GD I ++++ + +VP ++ + M A Sbjct: 117 VTVNGKTLDIASYQCKSGDTIAIRERKGSKKLAEGNLEFPGLANVPPHLELEKSKMTAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 T---GKCDREWVAIEINELLVVEYYSR 200 >gi|302543334|ref|ZP_07295676.1| ribosomal protein S4 [Streptomyces hygroscopicus ATCC 53653] gi|302460952|gb|EFL24045.1| ribosomal protein S4 [Streptomyces himastatinicus ATCC 53653] Length = 208 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR + L+ + K P+ R Y PG HG+ R Y LQLR Sbjct: 1 MARYTGADCKRCRREKQKLFLKGSKCESAKCPIEIRPYPPGEHGRGRTKDSEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR + EA++ G T NL+ LE+RLD +VYRA F + ARQ Sbjct: 60 KQKATRIYGVL-EKQFRGYYAEANKKTGKTGENLLRILETRLDNVVYRAGFAKSRDHARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H VNG +I S R D+IEV+QKS+ + A ++ +R VP ++ Sbjct: 119 LVRHGHFTVNGVKTDIPSARVAVNDIIEVRQKSRTMTPFQVAVAEAGDRTVPAWLEAIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +Q L+VE YS+ Sbjct: 179 QLRILVHSMPERQ---VIDTQVQEQLIVELYSK 208 >gi|148241720|ref|YP_001226877.1| 30S ribosomal protein S4 [Synechococcus sp. RCC307] gi|172047802|sp|A5GRL5|RS4_SYNR3 RecName: Full=30S ribosomal protein S4 gi|147850030|emb|CAK27524.1| 30S ribosomal protein S4 [Synechococcus sp. RCC307] Length = 202 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ ++ ++ RR+G+ K+ RSY PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGARLRVTRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F PTI +RQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQGGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNGR V+I SY+CK GDVI +++K + ++P ++ + + A Sbjct: 117 VTVNGRVVDIASYQCKAGDVIAIREKKPSKKLAETNLEFPGLANIPPHLELEKSKLTAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V + + + LVVE+YSR Sbjct: 177 V---GKCEREWVALEINELLVVEYYSR 200 >gi|118625943|emb|CAL39293.1| small ribosomal protein 4 [Anastrophyllum tubulosum] gi|118625945|emb|CAL39294.1| small ribosomal protein 4 [Anastrophyllum auritum] gi|118625951|emb|CAL39297.1| small ribosomal protein 4 [Anastrophyllum auritum] gi|118625953|emb|CAL39298.1| small ribosomal protein 4 [Anastrophyllum tubulosum] gi|118625955|emb|CAL39299.1| small ribosomal protein 4 [Anastrophyllum auritum] gi|118625977|emb|CAL39310.1| small ribosomal protein 4 [Anastrophyllum tubulosum] gi|118625979|emb|CAL39311.1| small ribosomal protein 4 [Anastrophyllum auritum] gi|118625983|emb|CAL39313.1| small ribosomal protein 4 [Anastrophyllum tubulosum] gi|118626001|emb|CAL41738.1| small ribosomal protein 4 [Anastrophyllum tubulosum] Length = 202 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200 >gi|284992847|ref|YP_003411401.1| 30S ribosomal protein S4 [Geodermatophilus obscurus DSM 43160] gi|284066092|gb|ADB77030.1| ribosomal protein S4 [Geodermatophilus obscurus DSM 43160] Length = 208 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR L+ + PK P+ R Y PG HG+ R Y LQLR Sbjct: 1 MARYTGADCRMCRREKMKLFLKGSKCESPKCPIEIRPYPPGEHGRGRSKDSEYL-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+FR ++EA++ G T L+ LESRLD +VYRA F + ARQ Sbjct: 60 KQKARRIYGVL-EKQFRGYYEEANKKSGKTGEVLLQILESRLDNVVYRAGFAESRDMARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H+ VNGR V+I SYR D+IEV +KS+++ A ++ ER VP ++ V Sbjct: 119 LVRHGHIRVNGRKVDIPSYRVASNDIIEVAEKSRRMLPFEIAQARAGERPVPPWLEVISS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ +Q L+VE YS+ Sbjct: 179 QLRVLVHSVPARQ---VIDTPVQEQLIVELYSK 208 >gi|260583938|ref|ZP_05851686.1| 30S ribosomal protein S4 [Granulicatella elegans ATCC 700633] gi|260158564|gb|EEW93632.1| 30S ribosomal protein S4 [Granulicatella elegans ATCC 700633] Length = 203 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K+ RR+G +L G K + R Y PG HG +SK S +G QL+ KQK++ Sbjct: 1 MSRYTGPSWKLSRRLGISLSGTGKE-IARRPYAPGQHGPNNRSKLSEYGQQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++FK+A + + N + LE RLD +VYR T ARQ VNH Sbjct: 60 MYG-MNERQFATLFKKAGKIKEGKHGENFMILLEQRLDNVVYRLGLASTRRQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV VNG+ V+I S++ + GDV+ V++KS+ L + E+ + PE+++ + + + + Sbjct: 119 HVTVNGKRVDIPSFQVQVGDVVGVREKSRNLTIIKESLESL-YGRPEFVTFDEEKLEGSL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +L+VE+Y++ Sbjct: 178 NRLPLRDELTS---DVDESLIVEYYNK 201 >gi|198282663|ref|YP_002218984.1| 30S ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667358|ref|YP_002424856.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 23270] gi|226697790|sp|B7J4A3|RS4_ACIF2 RecName: Full=30S ribosomal protein S4 gi|226697791|sp|B5EM98|RS4_ACIF5 RecName: Full=30S ribosomal protein S4 gi|198247184|gb|ACH82777.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519571|gb|ACK80157.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 208 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+K ++ RR G L+ + K PV+ R+Y PG HGQRR Y G QLR Sbjct: 1 MAKYTGPSCRLCRREGGKLFLKGEKCFSDKCPVSIRAYAPGQHGQRRGRVSEYGG-QLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR F+ A ++RG T L+ FLE RLD + YR F + ARQ Sbjct: 60 KQKIRRIYGVL-EGQFRRYFQRASQARGVTGELLLRFLELRLDNVAYRLGFGASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H+LVNGR V+I SY+ + GDV+ V + ++ + + + A R PE++S++ Sbjct: 119 VVRHGHILVNGRRVDIPSYQVRAGDVVSVAEAARTHIRIAASVEATAGRGFPEWVSMDTT 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + AT +P P + +VVE YS+ Sbjct: 179 ELKATIKAVPVREDMAP---DLNEQVVVELYSK 208 >gi|323703521|ref|ZP_08115167.1| ribosomal protein S4 [Desulfotomaculum nigrificans DSM 574] gi|323531512|gb|EGB21405.1| ribosomal protein S4 [Desulfotomaculum nigrificans DSM 574] Length = 208 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR G L+ + K V+ RSY PG HGQ RK Y G+QLR Sbjct: 1 MARYTGPHCRLCRREGLKLYLKGDRCYTGKCAVDRRSYAPGQHGQGRKKISEY-GIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK FR+ F+ A+R G T NL+ LE RLD ++YR + ARQ Sbjct: 60 KQKARRIYGVL-EKPFRNYFERAERQPGITGENLLRLLERRLDNVIYRLGLGASRVEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H VNGR VNI SY+ + GD I V++KSK+ + E + AER ++ + + Sbjct: 119 LVRHGHFTVNGRKVNIPSYQVRVGDEIAVREKSKESPRIKELMERAAERTPVAWLEYDAN 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A V +P+ + V +Q +L+VE YSR Sbjct: 179 EAKARVVALPTRDQ---IDVPVQDHLIVELYSR 208 >gi|284928899|ref|YP_003421421.1| 30S ribosomal protein S4P [cyanobacterium UCYN-A] gi|284809358|gb|ADB95063.1| SSU ribosomal protein S4P [cyanobacterium UCYN-A] Length = 202 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+P R+Y PG HGQ R+ + Y ++L KQK+ Sbjct: 1 MSRYRGPRLRVVRRLGELPGLSRKNP--RRTYPPGQHGQGRRKRSEY-AVRLEEKQKLLY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ K+A R+ G T L+ LE RLD V+R TI ARQ VNH H Sbjct: 58 NYG-VTEKQLIRYMKKARRATGSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHCH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNGR+VNI SY+C+ GD+I V+ V Q ++PE++ + + Sbjct: 117 VLVNGRTVNIASYQCRAGDIISVRNNDNSRRMVEANMQYPGLANLPEHLEFDKNTFTGKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + L+VE+YSR Sbjct: 177 NDVIKR---EWVALQINELLIVEYYSR 200 >gi|149922188|ref|ZP_01910626.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1] gi|149816928|gb|EDM76413.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1] Length = 202 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 11/205 (5%) Query: 9 HKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 ++ RR + L+ + K + R Y PG HGQ R+ +PS +G QLR KQK+K+ Y Sbjct: 2 CRLCRREDQKLFLKGDRCFSEKCAYDRRQYPPGQHGQGRRRRPSDYGHQLREKQKVKRMY 61 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G + EK+FR + +A R +G T NL+S LE RLD + R F + ARQ V H H Sbjct: 62 G-LLEKQFRGYYFKAARMKGITGENLLSLLERRLDNVAVRCGFAASHAEARQLVRHGHFT 120 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +NG+ VNI SY+ +EG+ I V++KS+++ +++A +R +P ++ ++ DN A Sbjct: 121 INGKKVNIPSYQVREGEEIVVREKSRKIQKIVDALAKLDRSPLPTWLEIDRDNFKAKIKN 180 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + L+VE YS+ Sbjct: 181 VPQRSD---ISADIDEQLIVELYSK 202 >gi|153012223|ref|YP_001381738.1| ribosomal protein S4 [Medicago truncatula] Length = 201 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q R SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKGP----TVGSELKNQSRSSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I K + K + + + A R+ +P +++++ Sbjct: 116 VLVNGRIVDIPSYRCKPEDIITAKDEQKSRTLIQNSLESAPREKLPIHLTLDPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|86739322|ref|YP_479722.1| 30S ribosomal protein S4 [Frankia sp. CcI3] gi|123751487|sp|Q2JFE9|RS4_FRASC RecName: Full=30S ribosomal protein S4 gi|86566184|gb|ABD09993.1| SSU ribosomal protein S4P [Frankia sp. CcI3] Length = 209 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 112/214 (52%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR L+ + PK P+ R Y PG HG+ R Y LQ R Sbjct: 1 MARYTGADCKRCRREKTKLFLKGSKCDTPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR + EA+R G T L+ LESRLD +VYR F P+ AARQ Sbjct: 60 KQKCARIYGVL-EKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172 V H HV VNGR V+I SYR E D++E+ K+++L + A + A R VP ++ V Sbjct: 119 AVRHGHVQVNGRKVDIPSYRISENDIVEIAPKARELTPFIVARETAGQGRAVPAWLEVIP 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ +Q L+VE YS+ Sbjct: 179 SQLRILVHSLPARQ---VIDTQVQEQLIVELYSK 209 >gi|297180260|gb|ADI16479.1| hypothetical protein [uncultured bacterium HF4000_05M23] Length = 208 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 9/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP--KSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQK 57 M++ K K RR G L RP K R PG Q+R+ + S +G QLR KQK Sbjct: 1 MARYTGPKCKNCRRFGMKLCSRPAGKCAWERRKSSPGDKSTQQRRRRISEYGTQLREKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + YG + E++FR+ +K+A R G T L+ LESRLD +VYR F + ARQ V Sbjct: 61 ARAIYGVL-ERQFRNYYKKASRLEGVTGDRLLQLLESRLDNVVYRLGFADSRPQARQIVG 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS--VLEASQLAERDVPEYISVNHDNM 175 H H+ VNG+ VNI SY+ GD I ++KSK+ ++ A + +P +++V+ D Sbjct: 120 HGHIRVNGKKVNIPSYQVSPGDRISWREKSKETGLFDIVSAGMGSNSIIPSWLNVDSDKA 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V +P K + + +VE+YSR Sbjct: 180 LGEVVTLP---KPSDVELAIDTRQIVEYYSR 207 >gi|118627522|emb|CAL39395.1| small ribosomal protein 4 [Lophozia ciliata] Length = 202 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKIKIPSHLTFDLPQLKGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|90101684|sp|Q3S664|RS4_CORAM RecName: Full=30S ribosomal protein S4 gi|73913590|gb|AAZ91711.1| 30S Ribosomal protein S4 [Corynebacterium stationis] Length = 201 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++ RR+ +L G R Y PG G+ R + Y LQL+ KQK K Sbjct: 1 MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR + EA+R G T NL+ LE+RLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-ERQFRRYYVEANRQPGKTGDNLVVLLETRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ N+ SYR + D+I+++++S+++ EA L E VP ++ V +++ Sbjct: 118 FTVNGKKTNVPSYRVSQYDIIDIRERSRKMEWFEEAQDRLGEAVVPAWLQVVPESLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201 >gi|162448043|ref|YP_001621175.1| 30S ribosomal protein S4 [Acholeplasma laidlawii PG-8A] gi|189045362|sp|A9NHG9|RS4_ACHLI RecName: Full=30S ribosomal protein S4 gi|161986150|gb|ABX81799.1| small subunit ribosomal protein S4 [Acholeplasma laidlawii PG-8A] Length = 198 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 125/206 (60%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S K+ RR+G ++ K + R Y PG HGQ R+SK S +G+QL+ KQK++ Sbjct: 1 MSRFTGSTWKVSRRLGYSISETGKE-LKKRPYAPGQHGQ-RRSKLSNYGIQLQEKQKVRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+F+ F E+ + +G N + LESRLD +VYR F T ARQ VNH H Sbjct: 59 VYG-VSEKQFKKTFLESAKMQGKQGENFLKLLESRLDNVVYRLGFTKTRAQARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SYR G +++K+KSK L V EA + A+ +Y++++ + V TF Sbjct: 118 ILVDGKKVDIPSYRLAPGQTVQLKEKSKNLTIVKEALE-AQFAHVDYVALDANG-VGTFS 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + + L+VEFY+R Sbjct: 176 RLPERNEFL---FDINEQLIVEFYNR 198 >gi|86606184|ref|YP_474947.1| 30S ribosomal protein S4 [Synechococcus sp. JA-3-3Ab] gi|123506364|sp|Q2JUD6|RS4_SYNJA RecName: Full=30S ribosomal protein S4 gi|86554726|gb|ABC99684.1| ribosomal protein S4 [Synechococcus sp. JA-3-3Ab] Length = 203 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 9/208 (4%) Query: 1 MSKRESSKHKIDRRIG--ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ + KI RR G + K P NT PG+HG RK K Y ++L KQK+ Sbjct: 1 MSRYTGPRLKIIRRFGGLDLPGLTRKRPKNT--NPPGMHGAERKKKSEY-AIRLEEKQKV 57 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SE++ ++A RS+G T L+ LE RLD IV+R PTI AARQ V+H Sbjct: 58 RLNYG-VSERQMLRYMRKARRSKGSTGLALLQMLEMRLDCIVFRLGMAPTIPAARQLVSH 116 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+ VNGR V I SY CK GDVI V+ K V ++ +P+Y+ + + + Sbjct: 117 GHIEVNGRKVTIPSYGCKVGDVITVRNKESSRKLVAAYAEYPGLFLPDYLEFDKEKLRGR 176 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + + LVVEFYSR Sbjct: 177 IKELPPREQ---ICAPVNELLVVEFYSR 201 >gi|251772517|gb|EES53083.1| ribosomal protein S4 [Leptospirillum ferrodiazotrophum] Length = 209 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 112/214 (52%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + RR G L+ + K ++ R+Y PG HGQ R Y GLQLR Sbjct: 1 MARYNGPVCRFCRREGVKLFLKGARCLSAKCAIDRRAYPPGEHGQSRAKASEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG I E++FR FK A R +G+T +L+S LE RLD++VY + + +R Sbjct: 60 KQKVKRIYG-ILERQFRKTFKVASRKKGNTGQSLLSALEMRLDSVVYHIGWGASRNESRM 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNH 172 V H HVLVNG+ VNI S+ C+ D I + +Q V + AE V ++ V+ Sbjct: 119 LVTHGHVLVNGKKVNIPSFSCRVNDTITLSSSMQQNEKVSANFRDAEIRGVVSPWLEVDK 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ A IP + + NLVVE YSR Sbjct: 179 NSFKAIVKDIPQRDA---INIHIAENLVVELYSR 209 >gi|312130523|ref|YP_003997863.1| ssu ribosomal protein s4p [Leadbetterella byssophila DSM 17132] gi|311907069|gb|ADQ17510.1| SSU ribosomal protein S4P [Leadbetterella byssophila DSM 17132] Length = 201 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 108/206 (52%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE + G K + ++Y PG HG+ R+ K S + LQL KQK+K Sbjct: 1 MARYTGPKSKISRKFGEAVLGPSK-ALAKKAYPPGQHGRGRRGKKSDYALQLLEKQKIKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++F IF A G T NLI ESRLD IVYR PT AARQ V H+H Sbjct: 60 TYGVL-ERQFARIFHLAGVKEGQTGENLIKLCESRLDNIVYRLGIAPTRRAARQLVTHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L++G NI S K G + V++KSK L ++ A+ L ++ ++ + F+ Sbjct: 119 ILLDGEVSNIPSILVKPGQKVAVREKSKALDTITTATSLNAAKKYGWLEFDNAELTGLFI 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + P VVE Y++ Sbjct: 179 NYPDLEQ---IPEQFNVQAVVELYNK 201 >gi|300779797|ref|ZP_07089653.1| 30S ribosomal protein S4 [Corynebacterium genitalium ATCC 33030] gi|300533907|gb|EFK54966.1| 30S ribosomal protein S4 [Corynebacterium genitalium ATCC 33030] Length = 201 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G S R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVGGDMS-FERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEANRLPGKTGDNLLVLLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG N+ SY+ + D+I+V++KS+ + +A L + VP ++ V + + Sbjct: 118 FTVNGVKTNVPSYQVTQYDIIDVREKSRNMLWFEDAQDNLVDSVVPAWLQVVPETLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201 >gi|289641139|ref|ZP_06473307.1| ribosomal protein S4 [Frankia symbiont of Datisca glomerata] gi|289509080|gb|EFD30011.1| ribosomal protein S4 [Frankia symbiont of Datisca glomerata] Length = 208 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR L+ + PK P+ R Y PG HG+ R Y LQ R Sbjct: 1 MARYTGADCKRCRREKTKLFLKGSKCESPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG I EK+FR + EA+R G T L+ LESRLD +VYRA F P+ AARQ Sbjct: 60 KQKCARIYG-ILEKQFRGYYDEANRRTGKTGDELLKILESRLDNVVYRAGFAPSRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H HV+VNG V+I SYR E D++E+ K+++L + A + A +R P ++ V Sbjct: 119 AVRHGHVVVNGGKVDIPSYRVSENDIVEIAPKARELTPFIIARETAGQRTPPPWLEVIPS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ +Q L+VE YS+ Sbjct: 179 QLRVLVHSLPARQ---VIDTQVQEQLIVELYSK 208 >gi|118625957|emb|CAL39300.1| small ribosomal protein 4 [Lethocolea glossophylla] gi|118625959|emb|CAL39301.1| small ribosomal protein 4 [Lethocolea glossophylla] Length = 202 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKAKSTY---IDHSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ E RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-VTERQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GDVI VK K K + +++ L ++ VP +++ + + Sbjct: 117 ISINNDIVDIPSYNCEPGDVITVKDKQKSQSIIIKNIDLFQKSKVPSHLTFDPTELRGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINRD---LINLKINELLVVEYYSR 200 >gi|118626107|emb|CAL41756.1| small ribosomal protein 4 [Anastrophyllum donnianum] Length = 202 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVELKINELLVVEYYSR 200 >gi|118626149|emb|CAL39372.1| small ribosomal protein 4 [Lophozia longidens] Length = 202 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSMITKNLNLFQKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|227487075|ref|ZP_03917391.1| ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC 51867] gi|227093149|gb|EEI28461.1| ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC 51867] Length = 201 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G R Y PG G+ R + Y +QL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRTDLVG-GDMAFERRPYPPGQAGRARIKESEYL-IQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+F ++EA R +G T NL+ LESRLD ++YRA T ARQ V H H Sbjct: 59 TYG-IMEKQFHRYYEEAARRKGKTGDNLVILLESRLDNVIYRAGLARTRRQARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG NI S++ + D+I+VK+KS+++ EA L + VP ++ V + Sbjct: 118 FLVNGVKTNIPSFQVSQYDIIDVKEKSRKMLWFEEAQDGLVDAVVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201 >gi|298243942|ref|ZP_06967749.1| ribosomal protein S4 [Ktedonobacter racemifer DSM 44963] gi|297556996|gb|EFH90860.1| ribosomal protein S4 [Ktedonobacter racemifer DSM 44963] Length = 210 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 109/214 (50%), Gaps = 12/214 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-----KSPVNT--RSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G L+ + K + R+ PG HG R K S + QLR Sbjct: 1 MARYTGPVCKLCRREGVKLFLKGDKCIQKCTLERHGRNTRPGQHGTSRARKESGYAKQLR 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQ++++ YG + E++F F A R G TS NL+ LE RLD +VYR F + AR Sbjct: 61 EKQRVRRTYGVL-ERQFSKHFVAAARRPGKTSENLLQILEMRLDNLVYRLGFADSRAQAR 119 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNH 172 Q VNH H +VNGR +I S+ K DVI V+ +K L A L+++ +P ++ ++ Sbjct: 120 QLVNHGHFVVNGRKTDIPSFIAKPNDVIAVRDSNKSLEYFKSRALLLSQKGIPTWLRLDV 179 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + M + +PS + +VVE+Y R Sbjct: 180 NAMSGRVLTLPSRTD---LELPFDEQMVVEYYQR 210 >gi|225849518|ref|YP_002729683.1| 30S ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644198|gb|ACN99248.1| ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1] Length = 204 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 M + K+ RR+G + G R++ PG HG+ + + K S +G++L+ KQK+K Sbjct: 1 MGRYIGPLTKVSRRLGVFIGG-DLESFQKRNFPPGQHGRTQGRKKLSDYGVRLQEKQKLK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E +FR F+EA + G+T L+ LE RLD +VYR F T ARQ V H Sbjct: 60 FLYGGLRESQFRRYFEEASKKAGNTGVVLLQLLERRLDNVVYRLGFAKTRQQARQLVKHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178 H VNG+ V+I SYR GD+IEV++KSK+LA E + + R +P+++ ++ +NM Sbjct: 120 HFTVNGKKVDIPSYRVDAGDIIEVREKSKKLAIFKENLENRDPRSIPKWLELDKENMRGK 179 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYS 205 V +++ + + ++EFYS Sbjct: 180 VV---EIPEEIELEIPVNVQYIIEFYS 203 >gi|91775227|ref|YP_544983.1| 30S ribosomal protein S4 [Methylobacillus flagellatus KT] gi|91775371|ref|YP_545127.1| 30S ribosomal protein S4 [Methylobacillus flagellatus KT] gi|123451995|sp|Q1H2K1|RS4_METFK RecName: Full=30S ribosomal protein S4 gi|91709214|gb|ABE49142.1| SSU ribosomal protein S4P [Methylobacillus flagellatus KT] gi|91709358|gb|ABE49286.1| SSU ribosomal protein S4P [Methylobacillus flagellatus KT] Length = 205 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 5/205 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 MS+ + K+ R +G +L G + + R PG HG + + K S FG++L+ KQK++ Sbjct: 1 MSRFTGPRLKVMRALGIDLPGLSRKTIEARPTPPGQHGAKNTRRKKSDFGVKLQEKQKLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SEK+ R + +A + + T L+ LE RLD +V+RA F PTI AARQ V HR Sbjct: 61 FNYG-LSEKQLRRLMVDARKGKSPTGETLLQLLERRLDNVVFRAGFAPTIAAARQLVTHR 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV++NG+SVNI S R + GD I +K S +L V+E PE+IS + A Sbjct: 120 HVMLNGKSVNIPSIRVRVGDEISLKASSTKLPIVVETLANPPLTRPEWISWAEQSQQAKV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 +P+ +DVP+PV + VVE+Y Sbjct: 180 AHLPA-AEDVPFPVDV--QQVVEYY 201 >gi|262341037|ref|YP_003283892.1| 30S ribosomal protein S4 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272374|gb|ACY40282.1| 30S ribosomal protein S4 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 208 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 120/207 (57%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M+K K KI RR GE ++G K + R Y G HG RR+ K S + +QL KQK K Sbjct: 7 MAKYIGPKTKISRRFGECIYGEDKY-FDRRKYPSGQHGNNRRRGKRSEYFIQLIEKQKAK 65 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++F +F EA R +G T L+ ESRLD IV+R KF P+ +ARQ V+HR Sbjct: 66 YTYG-ILERQFEKLFFEAARKKGITGELLLQACESRLDNIVFRLKFAPSRSSARQIVSHR 124 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VN R VNI S+R K GD I V++KSK+ +L++ Q + E++ + NMV F Sbjct: 125 HIFVNDRIVNIPSFRLKPGDKIGVREKSKKHPIILDSIQKKTGTLVEWLIFDEKNMVGIF 184 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + P ++ L+VE YS+ Sbjct: 185 RVMPKRTQ---IPENIKEQLIVELYSK 208 >gi|118625949|emb|CAL39296.1| small ribosomal protein 4 [Anastrophyllum auritum] Length = 202 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRXKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200 >gi|315925228|ref|ZP_07921442.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621462|gb|EFV01429.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC 23263] Length = 209 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR-------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ + + RR G L+ + K R PG +R++K S +GLQLR Sbjct: 1 MARYTEAACRQCRREGTKLYLKGERCYAKDKCAFGKRPTPPGG-APKRRAKLSEYGLQLR 59 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F A++ +G T NL++ LE+RLD VYR + AR Sbjct: 60 EKQKVKRIYGVL-EKQFRHYFDVAEKQQGITGENLLALLETRLDNAVYRMGMGQSRKEAR 118 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNH 172 Q V H H LVNG VN+ SY+ K GDVI V KSK+ A E + E R + ++ + Sbjct: 119 QLVLHGHFLVNGAKVNVASYQLKAGDVISVADKSKKSAKFKEVVESTENRAIVPWLEADL 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + PS + + +L+VE YS+ Sbjct: 179 EKLSGKVIGKPSR---EDIDIEIAEHLIVELYSK 209 >gi|307128728|ref|YP_003880758.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri CARI] gi|306483190|gb|ADM90060.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri CARI] Length = 204 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 114/208 (54%), Gaps = 6/208 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY--FGLQLRAKQKM 58 M+K K KI R+ GE ++G + Y PG HG R+ + +QL KQK+ Sbjct: 1 MAKYIGPKTKISRKFGELIYGNYNKSFEKKKYPPGQHGNNRRRNIKKSFYSIQLLEKQKV 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I E++FR +F +A + +G L+ ESRLD IVYR K + ARQ V+H Sbjct: 61 KYTYG-ILERQFRKMFYKASKKKGIKGEILLQLCESRLDNIVYRLKLSHSRPEARQLVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 RH+ VNG+ VNI SY K GD I +K+KSK+ +++ S + +++S +H M+ Sbjct: 120 RHITVNGKIVNIPSYNLKPGDKISLKEKSKKHKAIIYDSNRLLGSIKKWLSWDHHKMIGI 179 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F IP + P + NL+VE YS+ Sbjct: 180 FKSIPKRKQ---IPEKINENLIVELYSK 204 >gi|118626115|emb|CAL39357.1| small ribosomal protein 4 [Mesoptychia sahlbergii] gi|118626159|emb|CAL39377.1| small ribosomal protein 4 [Leiocolea rutheana] gi|118627550|emb|CAL39408.1| small ribosomal protein 4 [Leiocolea collaris] Length = 202 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I V+ K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200 >gi|257459219|ref|ZP_05624338.1| ribosomal protein S4 [Campylobacter gracilis RM3268] gi|257443604|gb|EEV18728.1| ribosomal protein S4 [Campylobacter gracilis RM3268] Length = 208 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR+G +L+ + KS + R Y PG HGQRR Y G QLR Sbjct: 1 MARYTGPVEKLERRLGVDLFMKGERRLAGKSALLKRPYAPGQHGQRRAKLSEY-GSQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T L+ LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARREGNTGAILVQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H+LV+G+ V+I SY + G IEV +KSK + A L A+ + ++ V + Sbjct: 119 LVTHGHILVDGKRVDIPSYSVRAGQKIEVIEKSKNNPQISRALDLTAQTGIVAWVDVEKE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + V + ++ +VE YS+ Sbjct: 179 KRYGIFSRVPEREEVV---IPVEERFIVELYSK 208 >gi|19551798|ref|NP_599800.1| 30S ribosomal protein S4 [Corynebacterium glutamicum ATCC 13032] gi|62389453|ref|YP_224855.1| 30S ribosomal protein S4 [Corynebacterium glutamicum ATCC 13032] gi|26399381|sp|Q8NSV4|RS4_CORGL RecName: Full=30S ribosomal protein S4 gi|21323328|dbj|BAB97956.1| Ribosomal protein S4 and related proteins [Corynebacterium glutamicum ATCC 13032] gi|41324787|emb|CAF19269.1| RIBOSOMAL PROTEIN S4 [Corynebacterium glutamicum ATCC 13032] Length = 201 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 IYG-VMEKQFRRYYAEANRRAGKTGENLVVLLESRLDNVVYRAGLANTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+++++ S+R + D+I V++KS+++ EA LA+ VP ++ V +N+ Sbjct: 118 FTVNGKAIDVPSFRVSQYDIINVREKSQKMNWFEEAQDNLADAVVPAWLQVVPENLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201 >gi|313183995|ref|YP_004021152.1| ribosomal protein S4 [Castanea mollissima] gi|309321522|gb|ADO65062.1| ribosomal protein S4 [Castanea mollissima] Length = 202 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVAT 178 +LVNGR V+I SYRCK D+I + + K A + + RD +P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITARDEQKSRALIQNCLDSSPRDEELPKHLTFHPFQYKGL 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 VNQIIDSK---WVGLKINELLVVEYYSR 200 >gi|294101656|ref|YP_003553514.1| ribosomal protein S4 [Aminobacterium colombiense DSM 12261] gi|293616636|gb|ADE56790.1| ribosomal protein S4 [Aminobacterium colombiense DSM 12261] Length = 209 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS+ ++ + G L+ + K + R ++K S +GL+LR Sbjct: 1 MSRYTGPVCRLCKAEGVKLFLKGDRCFTEKCAITRGETKNKQRRGRPRAKMSEYGLRLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++++YG ++E +FR +F EA R G T HN + LE RLD IVYR + ARQ Sbjct: 61 KQKLRRFYG-MNEGQFRRMFGEASRMSGVTGHNFLQLLERRLDNIVYRMGLATSRSQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H H V+GR V++ SY + G V+ V + SK++A + E ++ A R +PE++ VN + Sbjct: 120 LVLHGHFTVDGRKVDVPSYLIRAGAVVAVAENSKEVAIIRENAEVAASRMIPEWLEVNSE 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M A + IP + V + LVVEFY+R Sbjct: 180 RMEAKVLSIPMREQ---IDVPVNEQLVVEFYAR 209 >gi|148652261|ref|YP_001279354.1| 30S ribosomal protein S4 [Psychrobacter sp. PRwf-1] gi|172048490|sp|A5WCL3|RS4_PSYWF RecName: Full=30S ribosomal protein S4 gi|148571345|gb|ABQ93404.1| SSU ribosomal protein S4P [Psychrobacter sp. PRwf-1] Length = 213 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 17/218 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + ++ PG HG R Y LQLR K Sbjct: 1 MARYIGPKLKLSRREGTDLQLKSGVKPYDVKTKKAGRVPGQHGNTRNKASEY-SLQLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K+ YG + E++F + +KE+ R+RG T +L+ LE RLD +VYR F T ARQ Sbjct: 60 QKVKRMYGVL-ERQFANYYKESARARGATGEHLLQMLERRLDNVVYRMGFGSTRAEARQL 118 Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168 V+HR V++ VNI S + ++GDVI + +K+K+ + A +LA +R +PE++ Sbjct: 119 VSHRAVMIKKAGRDEFVRVNIPSIQVQDGDVIAIHEKAKEQLRIKNAIELATQRGIPEWL 178 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+H M TF + P + P + +L+VE YS+ Sbjct: 179 EVDHSKMQGTFKQAPDR---IDLPAEITESLIVELYSK 213 >gi|164688743|ref|ZP_02212771.1| hypothetical protein CLOBAR_02390 [Clostridium bartlettii DSM 16795] gi|164602219|gb|EDQ95684.1| hypothetical protein CLOBAR_02390 [Clostridium bartlettii DSM 16795] Length = 197 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K RR+G N+ G PK+ G R K S +GLQL KQ+++ Sbjct: 1 MAKMMGPRFKQCRRLGLNVCGHPKAMDRA-----GRGTSRADKKLSPYGLQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+FR+ K+A++S+ T LI LE RLD +VYR F +I ARQ V H H Sbjct: 56 YYGVL-EKQFRNYVKKAEKSKESTGVALIQMLECRLDNVVYRLGFANSIRQARQMVVHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I S+ + GD + +++KS+ E + + Y+S + D Sbjct: 115 ILVNGKKVDIPSFAVQVGDEVSLREKSRTNVMFKENFESGALNEYPYLSKDMDKFSGVLT 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + L+VEFYS+ Sbjct: 175 RLPERQE---VPIEIDEILIVEFYSK 197 >gi|118627504|emb|CAL39386.1| small ribosomal protein 4 [Diplophyllum taxifolium] Length = 202 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I V+ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITVRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200 >gi|169830463|ref|YP_001716445.1| RNA-binding S4 domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|226732175|sp|B1I1B2|RS4_DESAP RecName: Full=30S ribosomal protein S4 gi|169637307|gb|ACA58813.1| RNA-binding S4 domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 208 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ ++ RR G L+ + P+ V+ R PG H R+ K + FG+QLR Sbjct: 1 MARYTDARCRLCRREGTKLYLKGDRCYSPRCAVDRRPAPPGQHTPSRR-KVTEFGIQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + E +FR+ F +A+R G T NL+ LE RLD ++YR + ARQ Sbjct: 60 KQKVRRIYGVL-ESQFRNYFHKAERQPGVTGENLLRLLELRLDNVIYRLGLGASRAEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 V H H VNGR V+I SY+ + GDVI V+++SK L + E A E + P ++ + + Sbjct: 119 LVRHGHFKVNGRKVDIPSYQVRVGDVIAVRERSKGLTRIQELLDRASENNPPAWLEYDGE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VA V +P+ +++ PV LVVE YSR Sbjct: 179 RAVARVVALPTR-ENIDIPVR--EQLVVELYSR 208 >gi|118626103|emb|CAL39353.1| small ribosomal protein 4 [Lophozia setosa] Length = 202 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMALTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSVITKNLNLFQKLKIPSHLTFDFTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200 >gi|118627544|emb|CAL39405.1| small ribosomal protein 4 [Lophozia perssonii] Length = 202 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCELGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|120402446|ref|YP_952275.1| 30S ribosomal protein S4 [Mycobacterium vanbaalenii PYR-1] gi|145225547|ref|YP_001136225.1| 30S ribosomal protein S4 [Mycobacterium gilvum PYR-GCK] gi|315445899|ref|YP_004078778.1| 30S ribosomal protein S4P [Mycobacterium sp. Spyr1] gi|152112236|sp|A1T519|RS4_MYCVP RecName: Full=30S ribosomal protein S4 gi|189045387|sp|A4TEJ4|RS4_MYCGI RecName: Full=30S ribosomal protein S4 gi|119955264|gb|ABM12269.1| SSU ribosomal protein S4P [Mycobacterium vanbaalenii PYR-1] gi|145218033|gb|ABP47437.1| SSU ribosomal protein S4P [Mycobacterium gilvum PYR-GCK] gi|315264202|gb|ADU00944.1| SSU ribosomal protein S4P [Mycobacterium sp. Spyr1] Length = 201 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G +S R Y PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLGVDLVGGDQS-FEKRPYPPGQHGRARIKESEYR-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEANRLPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG V++ SYR + D+I+VK KS A Q A ER +P ++ V + Sbjct: 118 FTVNGVKVDVPSYRVSQYDIIDVKDKSINTLPFEVARQTAGERPIPGWLQVVGERQRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVELYSK 201 >gi|118626163|emb|CAL39379.1| small ribosomal protein 4 [Tritomaria scitula] Length = 202 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNNTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200 >gi|42524353|ref|NP_969733.1| 30S ribosomal protein S4 [Bdellovibrio bacteriovorus HD100] gi|61215581|sp|Q6MJ35|RS4A_BDEBA RecName: Full=30S ribosomal protein S4 A gi|39576562|emb|CAE80726.1| 30S ribosomal protein S4 [Bdellovibrio bacteriovorus HD100] Length = 208 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS S K+ RR L+ + K R Y PG HGQ R K S F LQLR Sbjct: 1 MSCINESVCKLCRRENVKLFLKGDRCYTDKCSFERRPYPPGQHGQSR-LKFSEFALQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+YYG +SEK+F EA+R++ T H L+ FLE+RLD +VY + + ARQ Sbjct: 60 KQKAKRYYG-VSEKQFVKYVGEANRAKELTGHALLKFLETRLDNVVYTLGYANSRREARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H L+NG+ NI S +GDVI+V + S+++A + A Q A R VP ++ +H Sbjct: 119 LVKHNHFLLNGKRANIPSILVNKGDVIQVAESSREMAKIQSAIQAVARRSVPAWLEADHA 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P+ V ++ N++VE+YSR Sbjct: 179 KFTGTVKDLPNR---EDVAVAVEENMIVEYYSR 208 >gi|30250077|ref|NP_842147.1| 30S ribosomal protein S4 [Nitrosomonas europaea ATCC 19718] gi|41017976|sp|Q82T00|RS4B_NITEU RecName: Full=30S ribosomal protein S4 B gi|30139184|emb|CAD86054.1| Ribosomal protein S4:S4 domain [Nitrosomonas europaea ATCC 19718] Length = 205 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 5/205 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ + KI R +G +L G + + +R PG HG + + + S FG++L+ KQK++ Sbjct: 1 MSRFTGPRLKIMRALGVDLPGLSRKTIASRPTPPGQHGAKLVRRRKSDFGIKLQEKQKLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++ R + A +S T L+ LE RLD +V+RA F PT+ AARQ V+HR Sbjct: 61 FNYG-LSERQLRHLMLNARKSTEPTGETLLQLLERRLDNVVFRAGFAPTVIAARQLVSHR 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV +NG+ VNI S R GD I +K +S L VL Q PE++ + + Sbjct: 120 HVRLNGKPVNIPSIRLNVGDEITIKPESLNLPIVLGTLQDLPLSRPEWLLWDEKDKTGKI 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 +P+ +DVP+P+ + VVE+Y Sbjct: 180 THLPT-AEDVPFPIDV--QQVVEYY 201 >gi|325972637|ref|YP_004248828.1| ribosomal protein S4 [Spirochaeta sp. Buddy] gi|324027875|gb|ADY14634.1| ribosomal protein S4 [Spirochaeta sp. Buddy] Length = 213 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 11/215 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVN--TRSYGPGLHGQRRKSKPSYFGLQL 52 M++ K + R L+ + K P+N + PG + R KP+ +GLQL Sbjct: 1 MARYTGPKCRYCRAERTKLFLKGERCHSGKCPMNDTKSTGLPGKDPRARSKKPTDYGLQL 60 Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 R KQK+K+ Y + EK+F+ F EA R G T NLI LE RLD +V+R F + A Sbjct: 61 REKQKLKRTYCML-EKQFKLTFDEAARIPGKTGENLIMLLEQRLDNVVFRLHFAASRNQA 119 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVN 171 QFVNH H+ VNG+ V+I SYR + GDV+ V K +++ + E + + V +++S++ Sbjct: 120 AQFVNHGHIFVNGKRVSIPSYRLRPGDVVSVGVKGQKMLMIKENLKEYTKSGVCQWLSLD 179 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D M TFV +P + + LVVE YSR Sbjct: 180 VDAMKGTFVAVPRRSEVTELE-KINEQLVVELYSR 213 >gi|118468301|ref|YP_885905.1| 30S ribosomal protein S4 [Mycobacterium smegmatis str. MC2 155] gi|171472975|sp|A0QSL7|RS4_MYCS2 RecName: Full=30S ribosomal protein S4 gi|118169588|gb|ABK70484.1| ribosomal protein S4 [Mycobacterium smegmatis str. MC2 155] Length = 201 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G +S R Y PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPATRKSRRLGVDLVGGDQS-FEKRPYPPGQHGRARIKESEYR-QQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 SYG-VMEKQFRRYYEEANRQPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 LVNG V+I SYR + D+I+VK+KS A + A ER +P ++ V + Sbjct: 118 FLVNGVKVDIPSYRVSQYDIIDVKEKSLNTLPFQIARETAGERPIPSWLQVVGERQRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE YS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVELYSK 201 >gi|118626105|emb|CAL39354.1| small ribosomal protein 4 [Barbilophozia floerkei] Length = 202 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + V L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRSKQKSQSIVTRNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200 >gi|34501413|ref|NP_904200.1| ribosomal protein S4 protein [Physcomitrella patens subsp. patens] gi|52783338|sp|Q6YXP3|RR4_PHYPA RecName: Full=30S ribosomal protein S4, chloroplastic gi|34494783|dbj|BAC85050.1| ribosomal protein S4 protein [Physcomitrella patens subsp. patens] Length = 201 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S Q K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VLVN V+I SYRCK D I VK + K A + + +++ VP +++ + Sbjct: 116 VLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 176 NQI---LDRESIGLKINELLVVEYYSR 199 >gi|13518426|ref|NP_084786.1| ribosomal protein S4 [Lotus japonicus] gi|26399164|sp|Q9BBT5|RR4_LOTJA RecName: Full=30S ribosomal protein S4, chloroplastic gi|13358967|dbj|BAB33184.1| ribosomal protein S4 [Lotus japonicus] Length = 201 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q R +K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----TVGSELRNQSRSTKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 V VNG V+I SYRCK D+I K K + + + A R ++P ++++ Sbjct: 116 VFVNGHIVDIPSYRCKPQDIITAKDNKKSKTLIQNSLESAPREELPTHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|319442996|ref|ZP_07992152.1| 30S ribosomal protein S4 [Corynebacterium variabile DSM 44702] Length = 201 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S + RR+ +L G +S R Y PG G+ R + Y QL+ KQK + Sbjct: 1 MARYTGSATRKSRRLRVDLVGGDRS-FERRPYPPGQAGRGRIKESEYL-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LE+RLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYAEANRRPGKTGANLVILLETRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ +N+ S++ + D+I+V+ +S+ + EA + L + VP ++ V + Sbjct: 118 FTVNGKKINVPSFQVSQYDIIDVRDRSRSMLWFEEAQENLLDSVVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVEFYSK 201 >gi|118626117|emb|CAL39358.1| small ribosomal protein 4 [Barbilophozia quadriloba var. glareosa] gi|118627546|emb|CAL39406.1| small ribosomal protein 4 [Barbilophozia quadriloba var. quadriloba] Length = 202 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNNTVDIPSYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|326383231|ref|ZP_08204919.1| 30S ribosomal protein S4 [Gordonia neofelifaecis NRRL B-59395] gi|326197981|gb|EGD55167.1| 30S ribosomal protein S4 [Gordonia neofelifaecis NRRL B-59395] Length = 201 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATKKSRRLRVDLIGGDQ-AYERRPYPPGQHGRARIKETEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEANRRSGKTGDVLLQILESRLDNVVYRAGLARTRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 + VNG V++ SYR + D+I+V+ KS Q A + L +R P ++ V + Sbjct: 118 LTVNGVRVDVPSYRVSQYDIIDVRPKSLQTTPFQIAKETLGDRPTPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + V + L+VE+YS+ Sbjct: 178 HSLPERAQ---IEVPLTEQLIVEYYSK 201 >gi|219673972|ref|YP_002456457.1| ribosomal protein S4 [Trifolium subterraneum] gi|193788941|gb|ACF20537.1| ribosomal protein S4 [Trifolium subterraneum] Length = 201 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q ++ S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPTD----GSKLRNQSPPTQKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I K + K + + + + R +P +++++ Sbjct: 116 VLVNGRIVDIPSYRCKPQDIITAKGEQKSRTLIQNSLESSPRGALPTHLTLHPLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + M LVVE+YSR Sbjct: 176 NQIIDSK---WVGLEMNELLVVEYYSR 199 >gi|118625941|emb|CAL39292.1| small ribosomal protein 4 [Lophozia jamesonii] gi|118626113|emb|CAL39356.1| small ribosomal protein 4 [Lophozia stolonifera] Length = 202 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNRKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKSKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|118626019|emb|CAL39327.1| small ribosomal protein 4 [Cryptochila paludosa] Length = 202 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD I +K K K + + + + L ++ +P +++ + + Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIKNKQKSQSIITKNTNLFQKVKIPSHLTFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|183981109|ref|YP_001849400.1| 30S ribosomal protein S4, RpsD [Mycobacterium marinum M] gi|226699093|sp|B2HCX3|RS4_MYCMM RecName: Full=30S ribosomal protein S4 gi|183174435|gb|ACC39545.1| 30S ribosomal protein S4, RpsD [Mycobacterium marinum M] Length = 201 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G +S R Y PG HG+ R Y QL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLGTDLVGGDQS-FEKRPYPPGQHGRARIKDSEYR-QQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRHSGKTGEELLKILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+I+V+ S A + A +R +P ++ V + Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDNSLNTVPFQIARETAGDRPIPSWLQVVGERQRILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE+YS+ Sbjct: 178 HQLPERAQ---IEVPLTEQLIVEYYSK 201 >gi|271962663|ref|YP_003336859.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021] gi|270505838|gb|ACZ84116.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021] Length = 208 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K+ RR L+ + K P+ R Y PG HG+ R + Y LQLR Sbjct: 1 MARYTGADCKLCRREKTKLFLKGKKCESAKCPIEIRPYPPGEHGRGRPKESEYQ-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG I EK+FR+ ++EA+R G T NL+ LESRLD +VYRA F + AARQ Sbjct: 60 KQKTRRIYG-ILEKQFRNYYEEANRKGGKTGENLLQILESRLDNVVYRAGFAESRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173 V H H+LVNG+ V+I SYR +E D++EV+++S+ L A + ++ P ++ V + Sbjct: 119 QVRHGHILVNGKKVDIPSYRVREHDIVEVRERSRNLLPYEVARATSGDKTFPAWLGVAPE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M ++P + +Q L+VE YS+ Sbjct: 179 AMRVLIHQLPVRQQ---IDTQVQEQLIVELYSK 208 >gi|300857808|ref|YP_003782791.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41] gi|300685262|gb|ADK28184.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41] gi|302205543|gb|ADL09885.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis C231] gi|302330098|gb|ADL20292.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis 1002] gi|308275779|gb|ADO25678.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis I19] Length = 201 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LE+RLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYAEANRLPGKTGDNLVILLEARLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ +N+ SY+ + D+I+V++KS+++ EA + L + VP ++ V + Sbjct: 118 FTVNGKKINVPSYKVSQYDIIDVREKSRKMIWFEEAQENLLDAVVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVEFYSK 201 >gi|166092841|gb|ABY82372.1| ribosomal protein S4 [Silene uniflora] Length = 201 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K +A + + +VP++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSIALIQNFIDSSPPEEVPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118627526|emb|CAL39397.1| small ribosomal protein 4 [Lophozia longiflora] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|48527411|gb|AAT45838.1| small ribosomal protein 4 [Plagiochila retrospectans] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|331699146|ref|YP_004335385.1| 30S ribosomal protein S4 [Pseudonocardia dioxanivorans CB1190] gi|326953835|gb|AEA27532.1| ribosomal protein S4 [Pseudonocardia dioxanivorans CB1190] Length = 201 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQ++ KQK + Sbjct: 1 MARYTGPMTRKSRRLKVDLVGGDQ-AFERRPYPPGQHGRIRIKETEYL-LQMQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R G T NL+ LESRLD +VYRA T ARQ VNH H Sbjct: 59 AYGVL-EKQFRRYYEEANRRPGKTGDNLLQILESRLDNVVYRAGLARTRRMARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG+ VNI SYR + D+I+VK KS + A + L +R +P ++ V N+ Sbjct: 118 FLVNGQKVNIPSYRVGQYDIIDVKPKSLGTDPFIIAKELLGDRPIPAWLQVVPSNLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + L+VE YS+ Sbjct: 178 HQLPERAQ---IDTQVTEQLIVELYSK 201 >gi|118626013|emb|CAL39324.1| small ribosomal protein 4 [Diplophyllum albicans] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNNTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPNHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200 >gi|15612279|ref|NP_223932.1| 30S ribosomal protein S4 [Helicobacter pylori J99] gi|7388210|sp|Q9ZJT4|RS4_HELPJ RecName: Full=30S ribosomal protein S4 gi|4155842|gb|AAD06816.1| 30S RIBOSOMAL PROTEIN S4 [Helicobacter pylori J99] gi|261840009|gb|ACX99774.1| 30S ribosomal protein S4 [Helicobacter pylori 52] gi|297380476|gb|ADI35363.1| ribosomal protein S4 [Helicobacter pylori v225d] Length = 208 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRTKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ ++I SY + G IE+K+K+K V+ A +L A+ + +I V D Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRAMELTAQTGIVPWIDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V V ++ L+VE YS+ Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208 >gi|118627524|emb|CAL39396.1| small ribosomal protein 4 [Crossocalyx hellerianus] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I V+ K + + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITVRNKQESQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|11497530|ref|NP_054938.1| ribosomal protein S4 [Spinacia oleracea] gi|133959|sp|P13788|RR4_SPIOL RecName: Full=30S ribosomal protein S4, chloroplastic gi|188036205|pdb|3BBN|D Chain D, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome. gi|7636111|emb|CAB88731.1| ribosomal protein S4 [Spinacia oleracea] gi|225464|prf||1303355A ribosomal protein S4 Length = 201 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I + + K +A + + L+ R ++P+++++N Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIMARDEQKSIALIQNSLDLSPREELPKHLTLNPFPYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118626111|emb|CAL39355.1| small ribosomal protein 4 [Gymnocolea inflata] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G + K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGASPGLTSKTLKLKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNGQKSQSIITKNINLFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 DQMVNR---EWVNLKINELLVVEYYSR 200 >gi|118626047|emb|CAL41748.1| small ribosomal protein 4 [Scapania obcordata] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN +V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + Sbjct: 117 ILVNNDTVDIPSYNCEPGDIITIKNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWINLKINELLVVEYYSR 200 >gi|109946782|ref|YP_664010.1| 30S ribosomal protein S4 [Helicobacter acinonychis str. Sheeba] gi|188528082|ref|YP_001910769.1| 30S ribosomal protein S4 [Helicobacter pylori Shi470] gi|207092545|ref|ZP_03240332.1| 30S ribosomal protein S4 [Helicobacter pylori HPKX_438_AG0C1] gi|208435192|ref|YP_002266858.1| ribosomal protein S4 [Helicobacter pylori G27] gi|210135453|ref|YP_002301892.1| 30S ribosomal protein S4 [Helicobacter pylori P12] gi|217033613|ref|ZP_03439041.1| hypothetical protein HP9810_899g49 [Helicobacter pylori 98-10] gi|254779836|ref|YP_003057942.1| 30S ribosomal protein S4 [Helicobacter pylori B38] gi|308183404|ref|YP_003927531.1| 30S ribosomal protein S4 [Helicobacter pylori PeCan4] gi|308185046|ref|YP_003929179.1| 30S ribosomal protein S4 [Helicobacter pylori SJM180] gi|123362789|sp|Q17ZB5|RS4_HELAH RecName: Full=30S ribosomal protein S4 gi|226699072|sp|B6JND4|RS4_HELP2 RecName: Full=30S ribosomal protein S4 gi|226699073|sp|B5Z8U3|RS4_HELPG RecName: Full=30S ribosomal protein S4 gi|226699074|sp|B2UV57|RS4_HELPS RecName: Full=30S ribosomal protein S4 gi|109714003|emb|CAJ99011.1| 30S ribosomal protein S4 [Helicobacter acinonychis str. Sheeba] gi|188144322|gb|ACD48739.1| 30S ribosomal protein S4 [Helicobacter pylori Shi470] gi|208433121|gb|ACI27992.1| ribosomal protein S4 [Helicobacter pylori G27] gi|210133421|gb|ACJ08412.1| 30S ribosomal protein S4 [Helicobacter pylori P12] gi|216943959|gb|EEC23393.1| hypothetical protein HP9810_899g49 [Helicobacter pylori 98-10] gi|254001748|emb|CAX29979.1| 30S ribosomal subunit protein S4 [Helicobacter pylori B38] gi|308060966|gb|ADO02862.1| 30S ribosomal protein S4 [Helicobacter pylori SJM180] gi|308062579|gb|ADO04467.1| 30S ribosomal protein S4 [Helicobacter pylori Cuz20] gi|308064071|gb|ADO05958.1| 30S ribosomal protein S4 [Helicobacter pylori Sat464] gi|308065589|gb|ADO07481.1| 30S ribosomal protein S4 [Helicobacter pylori PeCan4] gi|317009977|gb|ADU80557.1| 30S ribosomal protein S4 [Helicobacter pylori India7] gi|317011494|gb|ADU85241.1| 30S ribosomal protein S4 [Helicobacter pylori SouthAfrica7] gi|317013081|gb|ADU83689.1| 30S ribosomal protein S4 [Helicobacter pylori Lithuania75] gi|317014685|gb|ADU82121.1| 30S ribosomal protein S4 [Helicobacter pylori Gambia94/24] gi|317178033|dbj|BAJ55822.1| 30S ribosomal protein S4 [Helicobacter pylori F16] gi|317178415|dbj|BAJ56203.1| 30S ribosomal protein S4 [Helicobacter pylori F30] gi|317182540|dbj|BAJ60324.1| 30S ribosomal protein S4 [Helicobacter pylori F57] Length = 208 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ ++I SY + G IE+K+K+K V+ A +L A+ + +I V D Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRAMELTAQTGIVPWIDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V V ++ L+VE YS+ Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208 >gi|108563664|ref|YP_627980.1| 30S ribosomal protein S4 [Helicobacter pylori HPAG1] gi|122980453|sp|Q1CRW6|RS4_HELPH RecName: Full=30S ribosomal protein S4 gi|107837437|gb|ABF85306.1| ribosomal protein S4 [Helicobacter pylori HPAG1] Length = 208 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ ++I SY + G IE+K+K+K V+ A++L A+ + +I V D Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRATELTAQTGIVPWIDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V V ++ L+VE YS+ Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208 >gi|118626011|emb|CAL39323.1| small ribosomal protein 4 [Gymnocolea inflata] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKLKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNGQKSQSIITKNINLFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 DQMVNR---EWVNLKINELLVVEYYSR 200 >gi|283953794|ref|ZP_06371325.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 414] gi|283794835|gb|EFC33573.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 414] Length = 208 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K++RR G +L + KS ++ R Y PG HG RK K S +GLQLR Sbjct: 1 MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FR +F EA R G+T LI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ V+I S+R K G IE+ +KSK + A +L A+ + ++ V D Sbjct: 119 LVTHGHVLVDGKRVDIPSFRVKAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ +VE YS+ Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208 >gi|116515235|ref|YP_802864.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285369|sp|Q057C8|RS4_BUCCC RecName: Full=30S ribosomal protein S4 gi|58384668|gb|AAW72683.1| ribosomal protein S4 [Buchnera aphidicola (Cinara cedri)] gi|116257089|gb|ABJ90771.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 206 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR +L+ + + ++ PG HG RK + S + QLR KQ Sbjct: 1 MAKYLGPKLKLCRRENSDLFLKSGVRTIESKCNIDQAPGQHG-SRKLRLSEYAKQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I EK+F + +K+A + +G+T NL+ LESRLD IVYR F T ARQ + Sbjct: 60 KLRRLYG-ILEKQFHNYYKKASKLKGNTGQNLLFLLESRLDNIVYRLGFGTTRLEARQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 NH+ + VN + V+ S++ D I V +KSK + + + + +++ P ++S+++ NM Sbjct: 119 NHKSICVNNKIVSFPSFQVSIDDKISVVKKSKNQLRIKASLEIMKQKEKPSWLSIDYPNM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F+R + +L++E YS+ Sbjct: 179 EGVFLRSIERDD---LSSDINEHLIIELYSK 206 >gi|262203541|ref|YP_003274749.1| 30S ribosomal protein S4 [Gordonia bronchialis DSM 43247] gi|262086888|gb|ACY22856.1| ribosomal protein S4 [Gordonia bronchialis DSM 43247] Length = 201 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G + R Y PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPATKKSRRLRVDLIGGDQ-AFERRPYPPGQHGRSRIKESEYL-QQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA+R G T L+ LE+RLD +VYRA T ARQ V+H H Sbjct: 59 TYGVL-EKQFRRYYEEANRRNGKTGDELLRILETRLDNVVYRAGLARTRRQARQMVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VNG V++ SYR + D+I+V+ KS Q A ++ +R VP ++ V + Sbjct: 118 FTVNGVKVDVPSYRVGQYDIIDVRPKSLQTVPFQIAKEIQGDRPVPGWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + V + L+VEFYS+ Sbjct: 178 HNVPERAQ---IDVPLTEQLIVEFYSK 201 >gi|118627506|emb|CAL39387.1| small ribosomal protein 4 [Isopaches bicrenatus] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIKNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|166092852|gb|ABY82379.1| ribosomal protein S4 [Silene conica] Length = 201 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + A +VP++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSAPPEEVPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118626041|emb|CAL39332.1| small ribosomal protein 4 [Scapania undulata] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I + K K + + + L ++ +P +++ + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIGNKQKSQSIITKNLNLFQKLKIPSHLTFDLAQLQGYV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWINLKINELLVVEYYSR 200 >gi|118627536|emb|CAL39401.1| small ribosomal protein 4 [Tetralophozia setiformis] Length = 202 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFXKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|297621787|ref|YP_003709924.1| 30S ribosomal protein S4 [Waddlia chondrophila WSU 86-1044] gi|297377088|gb|ADI38918.1| 30S ribosomal protein S4 [Waddlia chondrophila WSU 86-1044] Length = 206 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 131/196 (66%), Gaps = 2/196 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ ++++I RR G N++GR ++P+ + PG+HG RR+ K S +GLQL KQK+K Sbjct: 1 MARYTGNRNRIARRFGVNIFGRARNPLIHKPNPPGVHGARRR-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+ + +K+A + +G+T +L LE RLD +VYR K TIFAA Q V+H H Sbjct: 60 VYGMISEKQLVNYYKKALKLKGNTPLHLAEMLECRLDNVVYRLKLASTIFAAHQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I S++ K G V+ VK++S+++ +V EA + +DVPEY S++ + + Sbjct: 120 ILVDGKKVDIRSFQVKPGMVVSVKERSQKMKAVNEALDNSMKDVPEYFSLDRNKFSGQLL 179 Query: 181 RIPSSLKDVPYPVIMQ 196 +P+ L+ +P+P+ + Sbjct: 180 SMPT-LEQIPWPLEIN 194 >gi|296268580|ref|YP_003651212.1| 30S ribosomal protein S4 [Thermobispora bispora DSM 43833] gi|296091367|gb|ADG87319.1| ribosomal protein S4 [Thermobispora bispora DSM 43833] Length = 208 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR L+ + K P+ R Y PG HG+ R + Y LQLR Sbjct: 1 MARYTGPDCKLCRREKTKLFLKGKKCESAKCPIEIRPYPPGEHGRGRPKESEYQ-LQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK ++ YG + EK+F ++EA R G T NL+ LESRLD +VYRA F + AARQ Sbjct: 60 KQKTRRIYGVL-EKQFHRYYEEASRRPGKTGENLLQILESRLDNVVYRAGFAESRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H H LVNGR VNI SYR +E DVIEV++ + L A +E+ +P ++ V+ + Sbjct: 119 QVRHGHFLVNGRKVNIPSYRVREHDVIEVRENKRHLMPYEVARATHSEKKIPAWLGVSTE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +M ++P+ + ++Q L+VE YS+ Sbjct: 179 HMRILVHQLPTRQQ---IDTLVQEQLIVELYSK 208 >gi|118626095|emb|CAL39349.1| small ribosomal protein 4 [Barbilophozia barbata] Length = 202 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I V+ + K + + + L ++ +P +++ + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITVRGRQKSQSIITQNINLFQKLKIPSHLTFELAQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200 >gi|118626157|emb|CAL39376.1| small ribosomal protein 4 [Barbilophozia attenuata] Length = 202 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ FLE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + V + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRSKQKSQSIVTKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|108802645|ref|YP_636301.1| ribosomal protein S4 [Eucalyptus globulus subsp. globulus] gi|309322451|ref|YP_003933964.1| ribosomal protein S4 [Eucalyptus grandis] gi|90101659|sp|Q49KZ6|RR4_EUCGG RecName: Full=30S ribosomal protein S4, chloroplastic gi|60460811|gb|AAX21031.1| ribosomal protein S4 [Eucalyptus globulus subsp. globulus] gi|308223285|gb|ADO23593.1| ribosomal protein S4 [Eucalyptus grandis] Length = 201 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I + K A + + +VP++++++ Sbjct: 116 ILVNGCIVDIPSYRCKPRDIITARDDQKSRAMIQNYFDSSPHEEVPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|118626043|emb|CAL41746.1| small ribosomal protein 4 [Lophozia ventricosa var. confertifolia] gi|118627540|emb|CAL39403.1| small ribosomal protein 4 [Lophozia ventricosa var. ventricosa] Length = 202 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|111220573|ref|YP_711367.1| 30S ribosomal protein S4 [Frankia alni ACN14a] gi|123339013|sp|Q0RRP4|RS4_FRAAA RecName: Full=30S ribosomal protein S4 gi|111148105|emb|CAJ59773.1| 30S ribosomal subunit protein S4 [Frankia alni ACN14a] Length = 209 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR L+ + PK P+ R Y PG HG+ R Y LQ R Sbjct: 1 MARYTGADCKRCRREKTKLFLKGSKCDTPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG I EK+FR + EA+R G T L+ LESRLD +VYR F P+ AARQ Sbjct: 60 KQKCARIYG-ILEKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172 V H HV VNGR V+I SYR E D++E+ K+++L + A + A R VP ++ Sbjct: 119 AVRHGHVQVNGRKVDIPSYRISENDIVEIAPKARELTPFIVARETAGQGRAVPAWLESIP 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ +Q L+VE YS+ Sbjct: 179 SQMRILVHSLPARQ---VIDTQVQEQLIVELYSK 209 >gi|289065091|ref|YP_003433977.1| ribosomal protein S4 [Typha latifolia] gi|69216110|gb|AAZ03893.1| ribosomal protein S4 [Typha latifolia] gi|281371774|gb|ADA63701.1| ribosomal protein S4 [Typha latifolia] Length = 201 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + + A ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDNQKSKGLIQNSIASAAHEELPKHLTIDSFQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|122893992|ref|YP_001004188.1| ribosomal protein S4 [Ranunculus macranthus] gi|69216108|gb|AAZ03892.1| ribosomal protein S4 [Ranunculus macranthus] gi|85540806|gb|ABC70758.1| ribosomal protein S4 [Ranunculus macranthus] Length = 201 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRPGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P++++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNFMDSSPHEELPKHLTLHPSQYKGSV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118627532|emb|CAL39399.1| small ribosomal protein 4 [Lophozia ventricosa var. confusa] Length = 202 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLXINELLVVEYYSR 200 >gi|118627514|emb|CAL39391.1| small ribosomal protein 4 [Lophozia obtusa] Length = 202 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKXIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|161784194|ref|YP_001595510.1| ribosomal protein S4 [Lemna minor] gi|88696772|gb|ABD48497.1| ribosomal protein S4 [Lemna minor] Length = 201 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + A + +VP++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDIISTKDNQRSKALIQNNMTSSPPEEVPKHLTLDSIQSKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|326792579|ref|YP_004310400.1| ribosomal protein S4 [Clostridium lentocellum DSM 5427] gi|326543343|gb|ADZ85202.1| ribosomal protein S4 [Clostridium lentocellum DSM 5427] Length = 208 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ SK K RR G+ L+ + + V R Y PG HGQ +K Y GLQLR Sbjct: 1 MARYIGSKCKQCRREGKKLFLKGERCFSAACSVEKRPYAPGQHGQAKKKLSEY-GLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + E KFR+ F+EADR +G T NL+ LE RLD + YR + ARQ Sbjct: 60 KQKAKRIYGVL-EGKFRTYFEEADRKQGITGENLLRLLELRLDNVCYRIGLGRSRTEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 V H + VNG+ VNI SY+ K GDVIEVK+ +K ++ R VPE++ + + Sbjct: 119 VVRHNLITVNGKRVNIPSYQVKVGDVIEVKEDAKSFERFKLTAEVTGSRIVPEWLEGDIE 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ T +P+ + + L+VE YS+ Sbjct: 179 NLRGTVKALPTREQ---IDTDIAETLIVELYSK 208 >gi|304316319|ref|YP_003851464.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777821|gb|ADL68380.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 198 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 86/204 (42%), Positives = 125/204 (61%), Gaps = 6/204 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ KH++ R +G L G PK P R Y PG HG R K S +G +L KQK+K Sbjct: 1 MARTIVPKHRMCRIVGHPLCGSPKCPSLKRPYAPGQHGLARGKKLSEYGRRLLEKQKLKS 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ E+++R F++A +S+ TS L+S LE RLD IVYR F PTI++ARQ V+H H Sbjct: 61 IY-NVKERQYRRYFEKALKSKEPTSEKLLSLLERRLDNIVYRMGFAPTIYSARQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ VNI SY GDV+ VK+KSK + + ++ D+P YI+V+ D M + Sbjct: 120 ILVNGKKVNIPSYEVNVGDVVSVKEKSKNMPLIKQSI--GTNDIPPYINVDVDKMEGKLI 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 ++P + PV + +L+VEFY Sbjct: 178 KLPRRSE---IPVEIDDHLLVEFY 198 >gi|145294734|ref|YP_001137555.1| 30S ribosomal protein S4 [Corynebacterium glutamicum R] gi|172044394|sp|A4QBQ6|RS4_CORGB RecName: Full=30S ribosomal protein S4 gi|140844654|dbj|BAF53653.1| hypothetical protein [Corynebacterium glutamicum R] Length = 201 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 IYG-VMEKQFRRYYAEANRRAGKTGENLVVLLESRLDNVVYRAGLANTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+++++ S+R + D+I V++KS+++ EA L + VP ++ V +N+ Sbjct: 118 FTVNGKAIDVPSFRVSQYDIINVREKSQKMNWFEEAQDNLVDAVVPAWLQVVPENLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201 >gi|118626097|emb|CAL39350.1| small ribosomal protein 4 [Jamesoniella colorata] Length = 202 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 YYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD I ++ K K + + + + L ++ +P +++ + + Sbjct: 117 ISINNGIVDIPSYNCEPGDTITIRNKQKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200 >gi|15645907|ref|NP_208086.1| 30S ribosomal protein S4 [Helicobacter pylori 26695] gi|217032048|ref|ZP_03437548.1| hypothetical protein HPB128_16g8 [Helicobacter pylori B128] gi|298735681|ref|YP_003728206.1| 30S ribosomal protein S4 [Helicobacter pylori B8] gi|2500400|sp|P56011|RS4_HELPY RecName: Full=30S ribosomal protein S4 gi|2314460|gb|AAD08337.1| ribosomal protein S4 (rps4) [Helicobacter pylori 26695] gi|216946196|gb|EEC24804.1| hypothetical protein HPB128_16g8 [Helicobacter pylori B128] gi|298354870|emb|CBI65742.1| small subunit ribosomal protein S4 [Helicobacter pylori B8] gi|307637965|gb|ADN80415.1| SSU ribosomal protein S4p:S9e [Helicobacter pylori 908] gi|325996570|gb|ADZ51975.1| 30S ribosomal protein S4 [Helicobacter pylori 2018] gi|325998160|gb|ADZ50368.1| 30S ribosomal protein S4 [Helicobacter pylori 2017] Length = 208 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ ++I SY + G IE+K+K+K + V+ A +L A+ + +I V D Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNSQVVRAMELTAQTGIVPWIDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V V ++ L+VE YS+ Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208 >gi|118626137|emb|CAL39366.1| small ribosomal protein 4 [Leiocolea heterocolpos] gi|118626143|emb|CAL39369.1| small ribosomal protein 4 [Leiocolea heterocolpos] gi|118626155|emb|CAL39375.1| small ribosomal protein 4 [Leiocolea heterocolpos] Length = 202 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I V+ K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCESGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200 >gi|315587183|gb|ADU41564.1| 30S ribosomal protein S4 [Helicobacter pylori 35A] Length = 208 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ ++I SY + G IE+K+K+K V+ A +L A+ + +I V D Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKNNPQVVRAMELTAQTGIAPWIDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V V ++ L+VE YS+ Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208 >gi|313183824|ref|YP_004021667.1| ribosomal protein S4 [Prunus persica] gi|309321436|gb|ADO64977.1| ribosomal protein S4 [Prunus persica] Length = 201 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I V+ + K A + R ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKTRDIITVRDEQKSRALIQNYLDSPPREELPKHLTLHPFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|323148908|ref|YP_004222463.1| ribosomal protein S4 [Smilax china] gi|308742599|gb|ADO33450.1| ribosomal protein S4 [Smilax china] Length = 201 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KSGSDLKNQLRSRKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + + A + + R ++P++++++ Sbjct: 116 ILVNGRVVDIPSYRCKPQDIITPKDEQRSKALIQNYIASSPREELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|169630850|ref|YP_001704499.1| 30S ribosomal protein S4 [Mycobacterium abscessus ATCC 19977] gi|226699092|sp|B1MGA0|RS4_MYCA9 RecName: Full=30S ribosomal protein S4 gi|169242817|emb|CAM63845.1| 30S ribosomal protein S4 [Mycobacterium abscessus] Length = 201 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G S R Y PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLGVDLVG-GSSAYEKRPYPPGQHGRARIKESEYR-QQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA RS G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYAEAVRSSGKTGEQLLQILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VN V++ SYR + D+I++K KS A + A ER +P ++ V + Sbjct: 118 FTVNNVKVDVPSYRVSQYDIIDIKPKSLNTLPFEVARETAGERPIPGWLQVVGERQRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VEFYS+ Sbjct: 178 HQLPERAQ---IDVPLAEQLIVEFYSK 201 >gi|283794970|ref|YP_003359361.1| ribosomal protein S4 [Olea europaea] gi|330850745|ref|YP_004376423.1| ribosomal protein S4 [Olea europaea subsp. europaea] gi|281428689|gb|ADA69928.1| ribosomal protein S4 [Olea europaea] gi|291059255|gb|ADD72091.1| ribosomal protein S4 [Olea europaea] gi|328795435|emb|CBR30317.1| ribosomal protein S4 [Olea europaea subsp. europaea] Length = 201 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K + + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|110456606|gb|ABG74733.1| ribosomal protein S4 [Forsythia europaea] Length = 201 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K + + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIIMAKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118616624|ref|YP_904956.1| 30S ribosomal protein S4 [Mycobacterium ulcerans Agy99] gi|152112235|sp|A0PMB6|RS4_MYCUA RecName: Full=30S ribosomal protein S4 gi|118568734|gb|ABL03485.1| 30S ribosomal protein S4, RpsD [Mycobacterium ulcerans Agy99] Length = 201 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+G +L G +S R Y PG HG+ R Y QL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLGTDLVGGDQS-FEKRPYPPGQHGRARIKDSEYR-QQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRHSGKTGEELLKILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+I+V+ S A + A +R +P ++ V Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDNSLNTVPFQIARETAGDRPIPSWLQVVGGRQRILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE+YS+ Sbjct: 178 HQLPERAQ---IEVPLTEQLIVEYYSK 201 >gi|261838613|gb|ACX98379.1| ribosomal protein S4 [Helicobacter pylori 51] Length = 208 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ ++I SY + G IE+K+K+K V+ A +L A+ + +I V D Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKNNPQVVRAMELTAQTGIVPWIDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V V ++ L+VE YS+ Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208 >gi|118625993|emb|CAL39318.1| small ribosomal protein 4 [Lophocolea concreta] Length = 202 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI AARQ VNH H Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNYIVDIPSYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|226305369|ref|YP_002765327.1| 30S ribosomal protein S4 [Rhodococcus erythropolis PR4] gi|229489412|ref|ZP_04383275.1| ribosomal protein S4 [Rhodococcus erythropolis SK121] gi|259495289|sp|C0ZW53|RS4_RHOE4 RecName: Full=30S ribosomal protein S4 gi|226184484|dbj|BAH32588.1| 30S ribosomal protein S4 [Rhodococcus erythropolis PR4] gi|229323509|gb|EEN89267.1| ribosomal protein S4 [Rhodococcus erythropolis SK121] Length = 201 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +KEA+ G T NL+ LESRLD +VYRA T ARQ V H H Sbjct: 59 TYG-VMEKQFRLYYKEANNRPGKTGENLLRILESRLDNVVYRAGLARTRRQARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 +LVN + V+I SYR + D+I+VK+KS A + +R VP ++ V + Sbjct: 118 LLVNNKKVDIPSYRVSQYDIIDVKEKSLSTLPFQVARETVGDRPVPGWLQVVGSRLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VE+YS+ Sbjct: 178 HQLPERAQ---IDIALQEQLIVEYYSK 201 >gi|118626145|emb|CAL39370.1| small ribosomal protein 4 [Barbilophozia hatcheri] Length = 202 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRSKQKSQSIITQNINLFQKLKIPSHLTFELAQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|169335656|ref|ZP_02862849.1| hypothetical protein ANASTE_02076 [Anaerofustis stercorihominis DSM 17244] gi|169258394|gb|EDS72360.1| hypothetical protein ANASTE_02076 [Anaerofustis stercorihominis DSM 17244] Length = 208 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR E L+ + K N R PG HG + SK S +G+QLR Sbjct: 1 MARYTEASCRLCRRENEKLFLKGSRCYSDKCAFNRRPTAPGQHG-SKGSKMSEYGVQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR F +A+R G NLIS LESRLD +VYR F + ARQ Sbjct: 60 KQKVKRIYGVL-EKQFRLYFDKAERKPGAAGENLISLLESRLDNVVYRMGFASSRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHD 173 V H H LV+G+ VNI S+ KEG VI+VK S++ + E +++ E VP Y V+ + Sbjct: 119 LVRHNHFLVDGKKVNIPSFSVKEGQVIKVKDDSRKSSKFKEIAEMNETKVPAAYTQVDME 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M + P+ + ++ +L+VE YS+ Sbjct: 179 KMEGKMIAAPTKAD---IEIPIEDHLIVELYSK 208 >gi|25027127|ref|NP_737181.1| 30S ribosomal protein S4 [Corynebacterium efficiens YS-314] gi|41017843|sp|Q8FS34|RS4_COREF RecName: Full=30S ribosomal protein S4 gi|23492407|dbj|BAC17381.1| putative 30S ribosomal protein S4 [Corynebacterium efficiens YS-314] Length = 201 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA+R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 IYG-VMEKQFRRYYAEANRRPGKTGENLVVMLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +VNG++V++ S+R + D+I+V++KS+++ EA L + VP ++ V + Sbjct: 118 FVVNGKAVDVPSFRVSQYDIIDVREKSQKMNWFEEAQDNLVDAIVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + +Q L+VEFYS+ Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201 >gi|118626071|emb|CAL39339.1| small ribosomal protein 4 [Anastrophyllum cavifolium] gi|118626167|emb|CAL39381.1| small ribosomal protein 4 [Barbilophozia atlantica] gi|118626169|emb|CAL39382.1| small ribosomal protein 4 [Barbilophozia atlantica] Length = 202 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ + K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNRHKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|166092835|gb|ABY82368.1| ribosomal protein S4 [Silene samia] gi|166092855|gb|ABY82381.1| ribosomal protein S4 [Silene latifolia] Length = 201 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + +VP++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEEVPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|296936673|gb|ADH94345.1| ribosomal protein S4 [Syzygium cumini] Length = 201 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I + K + + +VP++++++ Sbjct: 116 ILVNGCIVDIPSYRCKPRDIITARDDQKSRTMIQNYFDSSPHEEVPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|118626153|emb|CAL39374.1| small ribosomal protein 4 [Saccobasis polita] gi|118627548|emb|CAL39407.1| small ribosomal protein 4 [Saccobasis polita] Length = 202 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIKNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|157689454|gb|ABV65283.1| ribosomal protein S4 [Cornus florida] Length = 201 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + + + ++P++++V+ Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITARDEQKSRALIQNSLESSPHEELPKHLTVHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|156598368|gb|ABU85444.1| ribosomal protein S4 [Musa acuminata] Length = 201 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + L+ ++P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIALSPPEELPKHLTFDSFQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIDLKINELLVVEYYSR 199 >gi|166092872|gb|ABY82392.1| ribosomal protein S4 [Silene schafta] Length = 201 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + D +P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFLDSSPPDELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118625981|emb|CAL39312.1| small ribosomal protein 4 [Syzygiella setulosa] Length = 202 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY CK GD I ++ K K + + + + L ++ +P +++ + + Sbjct: 117 ISINNGIVDIPSYNCKPGDAITIRNKEKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200 >gi|114329970|ref|YP_740652.1| ribosomal protein S4 [Nandina domestica] gi|122165959|sp|Q09FV9|RR4_NANDO RecName: Full=30S ribosomal protein S4, chloroplastic gi|114054472|gb|ABI49865.1| ribosomal protein S4 [Nandina domestica] Length = 201 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|290487060|gb|ADD29914.1| ribosomal protein S4 [Antirrhinum majus] Length = 201 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K + + + +VP Y++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRTLIQNSLNSSPHEEVPNYLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118626139|emb|CAL39367.1| small ribosomal protein 4 [Tritomaria quinquedentata subsp. quinquedentata] gi|118626151|emb|CAL39373.1| small ribosomal protein 4 [Tritomaria quinquedentata subsp. turgida] Length = 202 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|118625963|emb|CAL39303.1| small ribosomal protein 4 [Syzygiella rubricaulis] Length = 202 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD +YR PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIYRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY CK GD I +K K K + + + + L ++ +P +++ + + Sbjct: 117 ISINNSIVDIPSYNCKPGDTITIKNKEKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200 >gi|118625975|emb|CAL39309.1| small ribosomal protein 4 [Anastrophyllum minutum] gi|118626005|emb|CAL39320.1| small ribosomal protein 4 [Anastrophyllum minutum] gi|118626121|emb|CAL39360.1| small ribosomal protein 4 [Anastrophyllum minutum] Length = 202 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|213964948|ref|ZP_03393147.1| ribosomal protein S4 [Corynebacterium amycolatum SK46] gi|213952484|gb|EEB63867.1| ribosomal protein S4 [Corynebacterium amycolatum SK46] Length = 201 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G R Y PG G+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPATRKSRRLRVDLVG-GDMNFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA R G T NL+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYAEAHRRPGKTGDNLVVLLESRLDNVVYRAGLARTRRQARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ +N+ S++ + D+I+V+ KS+++ EA + L + VP ++ V +++ Sbjct: 118 FTVNGKKINVPSFQVSQYDIIDVRPKSQKMIWFEEAQENLVDAVVPAWLQVVPESLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + + +Q L+VEFYS+ Sbjct: 178 HQTPERAQ---IDIPLQEQLIVEFYSK 201 >gi|118627534|emb|CAL39400.1| small ribosomal protein 4 [Jungermannia exsertifolia] Length = 202 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I VK K K + + + L E +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCELGDIITVKNKQKSQSIITKNINLFQESKIPSHLTFDSTKLQGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKVNELLVVEYYSR 200 >gi|48527359|gb|AAT45812.1| small ribosomal protein 4 [Plagiochila bantamensis] Length = 202 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD + R PT+ ARQ VNH H Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ + K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNEQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 177 NQMIDR---EWINLQINELLVVEYYSR 200 >gi|183217743|ref|YP_001837362.1| ribosomal protein S4 [Guizotia abyssinica] gi|179366258|gb|ACB86529.1| ribosomal protein S4 [Guizotia abyssinica] Length = 201 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I + + K A + + + ++P ++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|7525035|ref|NP_051061.1| ribosomal protein S4 [Arabidopsis thaliana] gi|6685914|sp|P56799|RR4_ARATH RecName: Full=30S ribosomal protein S4, chloroplastic gi|5881696|dbj|BAA84387.1| ribosomal protein S4 [Arabidopsis thaliana] Length = 201 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E + + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTEHQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|41323125|gb|AAR99792.1| small ribosomal protein 4 [Plagiochila subplana] Length = 202 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD + R PTI ARQ VNH H Sbjct: 58 HYG-LTEQQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GDVI V K K + V + ++ +P +++ N + + Sbjct: 117 ISINNDIVDIPSYNCEPGDVITVGNKQKSQSIVTKNINSFQKLKIPSHLTFNLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200 >gi|48527351|gb|AAT45808.1| small ribosomal protein 4 [Plagiochila alternans] Length = 202 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K +++ + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200 >gi|158317765|ref|YP_001510273.1| RNA-binding S4 domain-containing protein [Frankia sp. EAN1pec] gi|158113170|gb|ABW15367.1| RNA-binding S4 domain protein [Frankia sp. EAN1pec] Length = 209 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 111/214 (51%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR L+ + PK P+ R Y PG HG+ R Y LQ R Sbjct: 1 MARYTGADCKRCRREKTKLFLKGSKCETPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG I EK+FR + EA+R G T L+ LESRLD +VYR F P+ AARQ Sbjct: 60 KQKCARIYG-ILEKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172 V H HV VNGR V+I SYR E D++E+ KS++L + A + A R VP +I Sbjct: 119 AVRHGHVQVNGRKVDIPSYRVTENDIVEIAPKSRELTPFIVARETAGTGRTVPPWIEAIP 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ +Q L+VE YS+ Sbjct: 179 SQMRLLVHSLPARQ---VIDTQVQEQLIVELYSK 209 >gi|164597809|ref|NP_084669.2| ribosomal protein S4 [Oenothera elata subsp. hookeri] gi|169142699|ref|YP_001687126.1| ribosomal protein S4 [Oenothera argillicola] gi|169142849|ref|YP_001687272.1| ribosomal protein S4 [Oenothera glazioviana] gi|169142934|ref|YP_001687356.1| ribosomal protein S4 [Oenothera biennis] gi|169143020|ref|YP_001687440.1| ribosomal protein S4 [Oenothera parviflora] gi|172045788|sp|Q9MTP1|RR4_OENEH RecName: Full=30S ribosomal protein S4, chloroplastic gi|159792937|gb|ABW98693.1| ribosomal protein S4 [Oenothera argillicola] gi|159793107|gb|ABW98861.1| ribosomal protein S4 [Oenothera biennis] gi|159895461|gb|ABX10026.1| ribosomal protein S4 [Oenothera glazioviana] gi|159895546|gb|ABX10110.1| ribosomal protein S4 [Oenothera parviflora] gi|162423676|emb|CAB67134.2| ribosomal protein S4 [Oenothera elata subsp. hookeri] Length = 203 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDPRNQELSGNKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K A + + + +VP++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDDQKSKAMIQNSLESPPHEEVPKHLTFHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDS---EWVGLKINELLVVEYYSR 199 >gi|28261719|ref|NP_783234.1| ribosomal protein S4 [Atropa belladonna] gi|26399142|sp|Q8S8X2|RR4_ATRBE RecName: Full=30S ribosomal protein S4, chloroplastic gi|20068333|emb|CAC88046.1| ribosomal protein S4 [Atropa belladonna] Length = 201 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K A + + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQISLDSSPHEELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|114329748|ref|YP_740567.1| ribosomal protein S4 [Platanus occidentalis] gi|122166033|sp|Q09G44|RR4_PLAOC RecName: Full=30S ribosomal protein S4, chloroplastic gi|114054386|gb|ABI49780.1| ribosomal protein S4 [Platanus occidentalis] Length = 201 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KSP G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKSP----KAGSDLRNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSSHEELPKHLTLHSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLQINELLVVEYYSR 199 >gi|89280637|ref|YP_514854.1| ribosomal protein S4 [Solanum lycopersicum] gi|91208990|ref|YP_538850.1| ribosomal protein S4 [Solanum bulbocastanum] gi|108773132|ref|YP_635641.1| ribosomal protein S4 [Solanum tuberosum] gi|90101662|sp|Q2MI98|RR4_SOLLC RecName: Full=30S ribosomal protein S4, chloroplastic gi|90101667|sp|Q2MII5|RR4_SOLBU RecName: Full=30S ribosomal protein S4, chloroplastic gi|90101668|sp|Q2VEH5|RR4_SOLTU RecName: Full=30S ribosomal protein S4, chloroplastic gi|82754629|gb|ABB90043.1| ribosomal protein S4 [Solanum tuberosum] gi|84371897|gb|ABC56215.1| ribosomal protein S4 [Solanum bulbocastanum] gi|84371985|gb|ABC56302.1| ribosomal protein S4 [Solanum lycopersicum] gi|88656806|gb|ABD47059.1| ribosomal protein S4 [Solanum tuberosum] gi|89241673|emb|CAJ32395.1| ribosomal protein S4 [Solanum lycopersicum] Length = 201 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K + K A + + + ++P ++++ Sbjct: 116 ILVNGHIVDIPSYRCKPRDIITAKDEQKSRALIQISLDSSPHEELPNHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|94502493|ref|YP_588119.1| ribosomal protein S4 [Helianthus annuus] gi|122179576|sp|Q1KXV7|RR4_HELAN RecName: Full=30S ribosomal protein S4, chloroplastic gi|88656897|gb|ABD47148.1| ribosomal protein S4 [Helianthus annuus] Length = 201 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I + + K A + + + ++P ++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSRALIQNSLDSSPPEELPNHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|81301567|ref|YP_398864.1| ribosomal protein S4 [Nicotiana tomentosiformis] gi|90101664|sp|Q33C33|RR4_NICTO RecName: Full=30S ribosomal protein S4, chloroplastic gi|80750926|dbj|BAE48002.1| ribosomal protein S4 [Nicotiana tomentosiformis] Length = 201 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K A + + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSKALIQISLDSSPHEELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|254819220|ref|ZP_05224221.1| 30S ribosomal protein S4 [Mycobacterium intracellulare ATCC 13950] Length = 201 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+I+V+ S A + A +R +P ++ V + Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDSSLNTVPFQIARETAGDRPIPSWLQVVGERQRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VEFYS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEFYSK 201 >gi|118627516|emb|CAL39392.1| small ribosomal protein 4 [Anastrophyllum saxicola] Length = 202 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNNTVDISSYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|312977626|ref|ZP_07789373.1| LOW QUALITY PROTEIN: ribosomal protein S4 [Lactobacillus crispatus CTV-05] gi|310895365|gb|EFQ44432.1| LOW QUALITY PROTEIN: ribosomal protein S4 [Lactobacillus crispatus CTV-05] Length = 203 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 7/201 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K ++ R+Y PG HG + + S +G QL KQK++ Sbjct: 1 MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 59 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++FR++F A + R N + LE RLD++VYR T ARQ VNH Sbjct: 60 MYG-LNERQFRTLFTRAGKIREGQHGVNFMILLERRLDSLVYRLGLATTREQARQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY K G I +K+KSK L V +A + A P ++S + + M T Sbjct: 119 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALE-AVTARPSFVSFDENKMEGTL 177 Query: 180 VRIPSSLKDVPYPVIMQPNLV 200 VR+P + P + LV Sbjct: 178 VRLPERDEMEP---EIDEALV 195 >gi|282890085|ref|ZP_06298617.1| hypothetical protein pah_c012o009 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500013|gb|EFB42300.1| hypothetical protein pah_c012o009 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 229 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 126/196 (64%), Gaps = 2/196 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + PG+HG RR+ K S +G+QL KQK+K Sbjct: 24 MARYTGKKNRIARRFGANVFGRLRNPLLHKPNPPGMHGARRR-KKSDYGVQLEEKQKLKA 82 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE + + +K+A R +T+ L LE RLD +V+R KF TIFAA+Q V+H H Sbjct: 83 IYGMLSEGQLINYYKKAARLEANTAQVLAQMLECRLDIVVHRLKFGSTIFAAQQLVSHGH 142 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+ S++ + G VI V++KS+ + ++ EA + R VPEY+S++ +N + Sbjct: 143 ILVDGKKVDRRSFQVRPGMVISVREKSRGIKAIQEAQDSSMRSVPEYLSIDKENFSGQLL 202 Query: 181 RIPSSLKDVPYPVIMQ 196 PS + +P+P+ + Sbjct: 203 EYPS-YELMPWPIPIN 217 >gi|288919689|ref|ZP_06414016.1| ribosomal protein S4 [Frankia sp. EUN1f] gi|288348878|gb|EFC83128.1| ribosomal protein S4 [Frankia sp. EUN1f] Length = 209 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 111/214 (51%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + K RR L+ + PK P+ R Y PG HG+ R Y LQ R Sbjct: 1 MARYTGADCKRCRREKTKLFLKGSKCETPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK + YG + EK+FR + EA+R G T L+ LESRLD +VYR F P+ AARQ Sbjct: 60 KQKCARIYGVL-EKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172 V H HV VNGR V+I SYR E D++E+ KS++L + A + A R VP +I Sbjct: 119 AVRHGHVQVNGRKVDIPSYRVTENDIVEIAPKSRELTPFIVARETAGTGRTVPPWIEAIP 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +P+ +Q L+VE YS+ Sbjct: 179 SQMRLLVHSLPARQ---VIDTQVQEQLIVELYSK 209 >gi|188996212|ref|YP_001930463.1| ribosomal protein S4 [Sulfurihydrogenibium sp. YO3AOP1] gi|226695086|sp|B2V7I6|RS4_SULSY RecName: Full=30S ribosomal protein S4 gi|188931279|gb|ACD65909.1| ribosomal protein S4 [Sulfurihydrogenibium sp. YO3AOP1] Length = 204 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 M + K+ RR+G + G R++ PG HG+ + + K S +G++L+ KQK++ Sbjct: 1 MGRYIGPLTKVSRRLGVFVGG-DIESFQKRNFPPGQHGRTQGRKKLSDYGVRLQEKQKLR 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E +F+ F+ A ++ G+T L+ LE RLD +VYR F T ARQ V H Sbjct: 60 FLYGGIREGQFKRYFERASKAAGNTGTVLLQLLERRLDNVVYRLGFAKTRLQARQLVKHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178 H LVNG+ V+I SY +GD+IEV++KSK+L E + + R VP ++ ++ DN Sbjct: 120 HFLVNGKKVDIPSYELDKGDIIEVREKSKKLEVFKENLESRDPRSVPRWLEIDKDNFRGK 179 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYS 205 V +++ + + ++E+YS Sbjct: 180 VV---EIPEEIELEIPVNVQYIIEYYS 203 >gi|11465958|ref|NP_054500.1| ribosomal protein S4 [Nicotiana tabacum] gi|78102536|ref|YP_358677.1| ribosomal protein S4 [Nicotiana sylvestris] gi|133960|sp|P06359|RR4_TOBAC RecName: Full=30S ribosomal protein S4, chloroplastic gi|90101663|sp|Q3C1H5|RR4_NICSY RecName: Full=30S ribosomal protein S4, chloroplastic gi|11834|emb|CAA77354.1| ribosomal protein S4 [Nicotiana tabacum] gi|77799563|dbj|BAE46652.1| ribosomal protein S4 [Nicotiana sylvestris] gi|225202|prf||1211235AG ribosomal protein S4 Length = 201 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P N G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPRN----GSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K A + + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQISLDSSPHEELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|202958458|dbj|BAG71117.1| ribosomal protein S4 [Petunia integrifolia] gi|202958473|dbj|BAG71118.1| ribosomal protein S4 [Petunia integrifolia subsp. inflata] gi|202958481|dbj|BAG71119.1| ribosomal protein S4 [Petunia integrifolia subsp. inflata] Length = 201 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K A + + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDEQKSRALIQISLDSSPHEELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|229577756|ref|YP_002836092.1| ribosomal protein S4 [Megaleranthis saniculifolia] gi|226933884|gb|ACO92017.1| ribosomal protein S4 [Megaleranthis saniculifolia] Length = 201 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + + A + + ++P++++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYLDSSPHEELPKHLTLHSSQYKGSV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|254798683|ref|YP_003058268.1| ribosomal protein S4 [Parachlorella kessleri] gi|229915631|gb|ACQ90974.1| ribosomal protein S4 [Parachlorella kessleri] Length = 207 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 115/212 (54%), Gaps = 13/212 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54 MS+ K +I RR+GE K V R++ PG HG ++K +K S + ++L+ Sbjct: 1 MSRYRGPKLRIVRRLGELPGLTQK--VCVRNFPPGQHGPKKKLTGSQKAKESQYAIRLKE 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++ YG I+E++ +EA R +G T L+ LE+RLD +++R F PTI AARQ Sbjct: 59 KQKLRFNYG-INERQLLKYIREARRRKGSTGEVLLQLLETRLDNVIFRLGFAPTIAAARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H+LVN +NI SY CK DVI V + S+ L + + L VP ++ ++ + Sbjct: 118 LVAHGHILVNQHKINIPSYICKINDVIGVCETSRPLIT-KSLNSLGLPQVPSFLDLDQEK 176 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A S + + LVVE+YSR Sbjct: 177 LSAVVTNSISRD---MVGLNINELLVVEYYSR 205 >gi|218281549|ref|ZP_03487978.1| hypothetical protein EUBIFOR_00543 [Eubacterium biforme DSM 3989] gi|218217338|gb|EEC90876.1| hypothetical protein EUBIFOR_00543 [Eubacterium biforme DSM 3989] Length = 202 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 4/206 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S K RR+G ++ + R PG HG R+ K + +G+QL+ KQ+++ Sbjct: 1 MSRNTGSIWKKSRRLGFSV-LETGEELTRRDTIPGQHGSPRRPKLTNYGIQLQEKQRIRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SEK+F + + +A + G N + LESRLD IVYR F T A+RQ VNH H Sbjct: 60 TY-QLSEKQFYNTYLKASKKAGSAGENFLVMLESRLDNIVYRMGFARTRRASRQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV+G+ V+I S++ K G VIE+++++K L+ + EA + A V +++ VN D T+V Sbjct: 119 VLVDGKKVDIPSFQVKPGQVIEIRERAKNLSVINEALEAATATV-DFVEVNKDAKKGTYV 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + LVVEFY+R Sbjct: 178 RYPERKELFTAQ-EINELLVVEFYNR 202 >gi|317181016|dbj|BAJ58802.1| 30S ribosomal protein S4 [Helicobacter pylori F32] Length = 208 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 129/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG +SEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-VSEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ +++ SY + G IE+K+K+K V+ A +L A+ + +I V D Sbjct: 119 LVTHGHVLVDGKRLDVPSYFVRSGQKIEIKEKTKNNPQVVRAMELTAQTGIVPWIDVEKD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V V ++ L+VE YS+ Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208 >gi|118627520|emb|CAL39394.1| small ribosomal protein 4 [Lophozia ascendens] Length = 202 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQXLLQLLEMRLDNTIFRLGMAXTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L + +P +++ + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFXKMKIPSHLTFDLTQLQGXV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|118625965|emb|CAL39304.1| small ribosomal protein 4 [Leptoscyphus ovatus] Length = 202 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLEPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD++ ++ + K + + + L ++ +P +++ + + + Sbjct: 117 ISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 177 TQIINR---EWINLKINELLVVEYYSR 200 >gi|157689546|gb|ABV65329.1| ribosomal protein S4 [Quercus nigra] Length = 202 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVAT 178 +LVNGR V+I SYRCK D+I + + K A + + RD +P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITARDEQKYRALIKNCLDSSPRDEELPKHLTFHPFQYKGL 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 VNQIIDSK---WVGLKINELLVVEYYSR 200 >gi|118625947|emb|CAL39295.1| small ribosomal protein 4 [Gymnocoleopsis multiflora] Length = 202 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVSIARKAKGSTGQVLLQLLEMRLDNTIFRLGIAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SY C+ GD+I +K K K + + + ++ +P +++ + + + Sbjct: 117 ILVNSNLVDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQ---RVNREWVNLKINELLVVEYYSR 200 >gi|118626015|emb|CAL39325.1| small ribosomal protein 4 [Nardia scalaris] Length = 202 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200 >gi|116617110|ref|YP_817484.1| ribosomal protein S4 [Coffea arabica] gi|122153623|sp|A0A337|RR4_COFAR RecName: Full=30S ribosomal protein S4, chloroplastic gi|116242166|gb|ABJ89681.1| ribosomal protein S4 [Coffea arabica] Length = 201 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----RAGNDLRNQLRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K A + ++ + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITGKDEQKSRALIQKSLDSSPQEELPSHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|322378755|ref|ZP_08053184.1| 30S ribosomal protein S4 [Helicobacter suis HS1] gi|322380604|ref|ZP_08054756.1| 30S ribosomal protein S4 [Helicobacter suis HS5] gi|321146926|gb|EFX41674.1| 30S ribosomal protein S4 [Helicobacter suis HS5] gi|321148785|gb|EFX43256.1| 30S ribosomal protein S4 [Helicobacter suis HS1] Length = 208 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S+ K++RR G +L + KS ++ RSYGPG HGQ R+ K S +GLQLR Sbjct: 1 MARYRSAVEKLERRFGVSLALKGERRLSGKSALDKRSYGPGQHGQ-RRGKISDYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIFKEA+R G+T NLI LE RLD +VYR F T ARQ Sbjct: 60 KQKAKAMYG-ISEKQFRSIFKEANRMEGNTGENLICLLERRLDNVVYRMGFASTRSFARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173 V H H+LV+G+ ++I S + G IE+ +KSK+ + + +L+++ + +I V+ D Sbjct: 119 LVTHGHILVDGKRLDIPSAFIRHGQKIELIEKSKENPQIARSIELSKQTGMVAWIDVDQD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R P + V + ++ L+VE YS+ Sbjct: 179 KRFGIFTRYPQREEVV---IPIEERLIVELYSK 208 >gi|118625933|emb|CAL39288.1| small ribosomal protein 4 [Jamesoniella purpurascens] Length = 202 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD I ++ K K + + + + L ++ +P ++ + + Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKVKIPSHLIFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200 >gi|32480845|ref|NP_862756.1| ribosomal protein S4 [Calycanthus floridus var. glaucus] gi|52783277|sp|Q7YJX0|RR4_CALFG RecName: Full=30S ribosomal protein S4, chloroplastic gi|32399381|emb|CAD28723.1| ribosomal protein S4'' [Calycanthus floridus var. glaucus] Length = 201 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + + A + ++P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYLDSPSHEELPKHLTFHPSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|313199704|ref|YP_004021318.1| ribosomal protein S4 [Theobroma cacao] gi|309321268|gb|ADO64811.1| ribosomal protein S4 [Theobroma cacao] gi|328924785|gb|ADO64892.2| ribosomal protein S4 [Theobroma cacao] Length = 201 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RTGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVCIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR+V+I SYRCK D+I + + K + + ++P++++++ Sbjct: 116 ILVNGRTVDIPSYRCKPRDIISARDEQKSRTLIQNYLDSSTHEELPKHLTLHTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199 >gi|166092850|gb|ABY82378.1| ribosomal protein S4 [Silene integripetala] Length = 201 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|261414617|ref|YP_003248300.1| ribosomal protein S4 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371073|gb|ACX73818.1| ribosomal protein S4 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327627|gb|ADL26828.1| ribosomal protein S4 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 201 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS K K+ R +G + + + ++ R++ PG HGQ RK S + QL KQ+++ Sbjct: 1 MSSFRGPKGKVARSLGVAVSQKTQKALDRRNFAPGQHGQTRKKSASVYKQQLVEKQRLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +ISE + +KEA+R G NL+ LE+RLD +VYR F TIFAARQ+V H H Sbjct: 61 TY-NISEAQLAKAYKEANRREGSAGDNLMILLETRLDAVVYRMGFARTIFAARQYVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VNG S K GDVI V+++SK+ + EA A PEY+SV+ M T V Sbjct: 120 FTVNGVRSFSPSRLIKAGDVIAVREQSKEHVQIKEAIASAAAA-PEYLSVDLGKMQGTLV 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + PV ++ LVVE+YSR Sbjct: 179 KLPLRDQ---IPVKLEEQLVVEYYSR 201 >gi|118627508|emb|CAL39388.1| small ribosomal protein 4 [Lophozia ventricosa var. ventricosa] Length = 202 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCETGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|166092844|gb|ABY82374.1| ribosomal protein S4 [Silene zawadskii] Length = 201 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ S + + + LVVE+YSR Sbjct: 176 NQLIDSK---WFGLKINELLVVEYYSR 199 >gi|166092881|gb|ABY82398.1| ribosomal protein S4 [Heliosperma alpestre] Length = 201 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + L+ ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFLDLSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118626029|emb|CAL39330.1| small ribosomal protein 4 [Scapania lingulata] Length = 202 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLRQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWINLKINELLVVEYYSR 200 >gi|118626009|emb|CAL39322.1| small ribosomal protein 4 [Mylia taylorii] Length = 203 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 108/208 (51%), Gaps = 9/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVAT 178 + +N V+I SY C+ GD++ ++ K K + + + L ++ +P ++S + N+ + Sbjct: 117 ISINNDIVDIPSYNCEPGDILTIRNKQKSQSIITKNINLLNQNLKIPSHLSFDSTNLRGS 176 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 INQTINR---EWVNLKINELLVVEYYSR 201 >gi|111023124|ref|YP_706096.1| 30S ribosomal protein S4 [Rhodococcus jostii RHA1] gi|226365623|ref|YP_002783406.1| 30S ribosomal protein S4 [Rhodococcus opacus B4] gi|122955187|sp|Q0S3E8|RS4_RHOSR RecName: Full=30S ribosomal protein S4 gi|254764607|sp|C1B040|RS4_RHOOB RecName: Full=30S ribosomal protein S4 gi|110822654|gb|ABG97938.1| 30S ribosomal protein S4 [Rhodococcus jostii RHA1] gi|226244113|dbj|BAH54461.1| 30S ribosomal protein S4 [Rhodococcus opacus B4] Length = 201 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +KEA+ G T NL+ LESRLD +VYRA T ARQ V H H Sbjct: 59 TYG-VMEKQFRLYYKEANNRPGKTGENLLRILESRLDNVVYRAGLARTRRQARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 +LVN + V+I SYR + D+I+VK+KS A + +R +P ++ V + Sbjct: 118 LLVNNKKVDIPSYRVSQYDIIDVKEKSLSTLPFQVARETQGDRPIPGWLQVVGGRLRVLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE+YS+ Sbjct: 178 HQLPERAQ---IDVPLQEQLIVEYYSK 201 >gi|290487074|gb|ADD29921.1| ribosomal protein S4 [Nelumbo nucifera] Length = 201 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----KAGSDLRNQARSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVCIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|312140890|ref|YP_004008226.1| 30S ribosomal protein s4 rpsd [Rhodococcus equi 103S] gi|325675472|ref|ZP_08155156.1| 30S ribosomal protein S4 [Rhodococcus equi ATCC 33707] gi|311890229|emb|CBH49547.1| 30S ribosomal protein S4 RpsD [Rhodococcus equi 103S] gi|325553443|gb|EGD23121.1| 30S ribosomal protein S4 [Rhodococcus equi ATCC 33707] Length = 201 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA G T NL+ LESRLD +VYRA T ARQ V H H Sbjct: 59 TYG-VMEKQFRRYYQEAVNRPGKTGENLLQILESRLDNVVYRAGLARTRRQARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 +LVN + V+I SYR + D+I+V++KS A + +R +P ++ V + Sbjct: 118 LLVNNKKVDIPSYRVSQYDIIDVREKSLATLPFQVARETQGDRPIPGWLQVVGGRLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V +Q L+VE+YS+ Sbjct: 178 HQLPERAQ---IEVPLQEQLIVEYYSK 201 >gi|118625969|emb|CAL39306.1| small ribosomal protein 4 [Syzygiella rubricaulis] Length = 202 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY CK GD I ++ K K + + + + L ++ +P +++ + + Sbjct: 117 ISINNGIVDIPSYNCKPGDTITIRNKEKSQSIITQNTNLLQKVKIPSHLTFDLTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWVNLKINELLVVEYYSR 200 >gi|81176252|ref|YP_398331.1| ribosomal protein S4 [Lactuca sativa] gi|90101661|sp|Q332X6|RR4_LACSA RecName: Full=30S ribosomal protein S4, chloroplastic gi|78675170|dbj|BAE47596.1| chloroplast 30S ribosomal protein S4 [Lactuca sativa] gi|88656985|gb|ABD47235.1| ribosomal protein S4 [Lactuca sativa] Length = 201 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I + + K + + + ++P ++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSKVLIQNSLDSSPHEELPNHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|290487062|gb|ADD29915.1| ribosomal protein S4 [Aucuba japonica] Length = 201 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + + R ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNSLDSSTREELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|317505828|ref|ZP_07963673.1| ribosomal protein S4 [Segniliparus rugosus ATCC BAA-974] gi|316255910|gb|EFV15135.1| ribosomal protein S4 [Segniliparus rugosus ATCC BAA-974] Length = 201 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G K RSY PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPITRRSRRLRVDLVGGDK-AFERRSYPPGQHGRSRVKESEYL-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ ++EA R G T NL+ LE+RLD ++YRA T ARQ V H H Sbjct: 59 TYG-VMERQFRNYYEEAHRRTGKTGENLLRILETRLDNVIYRAGLARTRRHARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 LVN + V++ SYR + D+I+V+++S A +L +R VP ++ V D + Sbjct: 118 FLVNQKRVDVPSYRVSQYDIIDVREQSTHADPFEIARELFGDRPVPGWLQVVPDTLRIFV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + V +Q L+VEFYS+ Sbjct: 178 HAEPVREQ---IDVPLQEQLIVEFYSK 201 >gi|118627500|emb|CAL39384.1| small ribosomal protein 4 [Lophocolea difformis] Length = 202 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|118627528|emb|CAL39398.1| small ribosomal protein 4 [Schistochilopsis incisa] Length = 202 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNTIFRLGMALTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSVITKNLNLFQKLKIPNHLTFDFTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|73666827|ref|YP_302843.1| 30S ribosomal protein S4 [Ehrlichia canis str. Jake] gi|123615083|sp|Q3YSR0|RS4_EHRCJ RecName: Full=30S ribosomal protein S4 gi|72393968|gb|AAZ68245.1| SSU ribosomal protein S4P [Ehrlichia canis str. Jake] Length = 202 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 99/206 (48%), Positives = 137/206 (66%), Gaps = 4/206 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K++ RR+G +LWGR K P NTR+Y PG HG KPS FG Q A +K K Sbjct: 1 MAVQR--KYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFAAHKKFKF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY IS K+ R++F +A + RGDT N + LESRL +I+Y + VPTIF+ARQ ++H+H Sbjct: 59 YYA-ISSKQMRNVFLKAYKKRGDTGDNFVGLLESRLSSILYNSGLVPTIFSARQLISHKH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVNG++VNI SY K GDV+ +K+K+K L +V+ A Q E VP+Y+ V+ ++ Sbjct: 118 VLVNGKTVNISSYIVKVGDVVTLKEKAKNLPAVIAAIQSQEHKVPDYLEVDTQEKSVRYL 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + VPYP M+ NLV+EFYSR Sbjct: 178 RVPKYCE-VPYPATMEVNLVIEFYSR 202 >gi|118626077|emb|CAL39342.1| small ribosomal protein 4 [Plicanthus hirtellus] Length = 202 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYSCESGDIITIRNKQKSQSIITKNINLFQKSKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|166092861|gb|ABY82385.1| ribosomal protein S4 [Silene sordida] Length = 201 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIMAKDEQKSRALIKNFLDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|139389420|ref|YP_001123117.1| ribosomal protein S4 [Olimarabidopsis pumila] gi|152060556|sp|A4QJT5|RR4_OLIPU RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286314|dbj|BAF49941.1| ribosomal protein S4 [Olimarabidopsis pumila] Length = 201 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK V A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDDQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|118627538|emb|CAL39402.1| small ribosomal protein 4 [Lophozia excisa] Length = 202 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I +K K K + + + L ++ +P ++ + + + Sbjct: 117 ISVNNDTVDIPSYNCQPGDIITIKNKPKSQSIITKNLNLFQKLKIPSHLIFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200 >gi|48527361|gb|AAT45813.1| small ribosomal protein 4 [Plagiochila bicuspidata] Length = 202 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRXKIIRRLGTLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +K K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|253999473|ref|YP_003051536.1| 30S ribosomal protein S4 [Methylovorus sp. SIP3-4] gi|253986152|gb|ACT51009.1| ribosomal protein S4 [Methylovorus sp. SIP3-4] Length = 205 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 5/205 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 MS+ + K+ R +G +L G + + R PG HG + + K S FG++L KQK++ Sbjct: 1 MSRFTGPRLKVMRALGVDLPGLSRKSIEQRPTPPGQHGAKAVRRKKSDFGIKLMEKQKLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++ R + +A R + T L+ LE RLD +V+RA F PTI AARQ V+HR Sbjct: 61 FNYG-LSERQLRRLMVDARRGKAPTGETLLQLLERRLDNVVFRAGFAPTIAAARQLVSHR 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ +NG+ V+I S R + GD I +K S Q+ V E + PE++S + VA Sbjct: 120 HLQLNGKVVSIPSIRLRVGDEISLKPASAQIPIVNETLKDMPLIRPEWLSWDDTQRVARI 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 +P+ +DVP+PV + VVE+Y Sbjct: 180 SHLPA-AEDVPFPVDV--QQVVEYY 201 >gi|41410330|ref|NP_963166.1| 30S ribosomal protein S4 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464319|ref|YP_883534.1| 30S ribosomal protein S4 [Mycobacterium avium 104] gi|254776831|ref|ZP_05218347.1| 30S ribosomal protein S4 [Mycobacterium avium subsp. avium ATCC 25291] gi|61215639|sp|Q73S44|RS4_MYCPA RecName: Full=30S ribosomal protein S4 gi|152112231|sp|A0QKU6|RS4_MYCA1 RecName: Full=30S ribosomal protein S4 gi|41399164|gb|AAS06782.1| RpsD [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165606|gb|ABK66503.1| ribosomal protein S4 [Mycobacterium avium 104] Length = 201 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD +VYRA T ARQ V H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG V++ SYR + D+I+V+++S A + A +R VP ++ V + Sbjct: 118 FTVNGVRVDVPSYRVSQYDIIDVREQSLNSVPFQIARETAGDRPVPSWLQVVGERQRILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VEFYS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEFYSK 201 >gi|86438886|emb|CAJ55411.1| small ribosomal protein 4 [Plagiochila dusenii] Length = 202 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCQPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|240167782|ref|ZP_04746441.1| 30S ribosomal protein S4 [Mycobacterium kansasii ATCC 12478] Length = 201 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+I+V+ S A + A +R +P ++ V + Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDTSLNTVPFQIARETAGDRPIPSWLQVVGERQRILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VEFYS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEFYSK 201 >gi|118626161|emb|CAL39378.1| small ribosomal protein 4 [Lophozia wenzelii] Length = 202 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQXLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEXGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|118626079|emb|CAL39343.1| small ribosomal protein 4 [Delavayella serrata] Length = 202 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I VK K K + + + L ++ +P ++ + N+ + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKSKIPSHLIFDSTNLSGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---ESINLKINELLVVEYYSR 200 >gi|313201502|ref|YP_004040160.1| 30S ribosomal protein S4 [Methylovorus sp. MP688] gi|312440818|gb|ADQ84924.1| ribosomal protein S4 [Methylovorus sp. MP688] Length = 205 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 5/205 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 MS+ + K+ R +G +L G + + R PG HG + + K S FG++L KQK++ Sbjct: 1 MSRFTGPRLKVMRALGVDLPGLSRKSIEQRPTPPGQHGAKAVRRKKSDFGIKLMEKQKLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++ R + +A R + T L+ LE RLD +V+RA F PTI AARQ V+HR Sbjct: 61 FNYG-LSERQLRRLMVDARRGKAPTGETLLQLLERRLDNVVFRAGFAPTIAAARQLVSHR 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ +NG+ V+I S R + GD I +K S Q+ V E + PE++S + VA Sbjct: 120 HLQLNGKVVSIPSIRLRVGDEISLKPASAQIPIVNETLKDMPLIRPEWLSWDDTQRVARI 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 +P+ +DVP+PV + VVE+Y Sbjct: 180 AHLPA-AEDVPFPVDV--QQVVEYY 201 >gi|118626017|emb|CAL39326.1| small ribosomal protein 4 [Marsupella lacerata] Length = 202 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD +YR TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIYRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPGHLTFDSIELRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200 >gi|71891998|ref|YP_277728.1| 30S ribosomal protein S4 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|90101676|sp|Q493I5|RS4_BLOPB RecName: Full=30S ribosomal protein S4 gi|71796104|gb|AAZ40855.1| 30S ribosomal subunit protein S4 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 207 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR G +L+ + ++++ PG H RKS+ S +G+QLR KQ Sbjct: 1 MAKYLGPKLKLSRREGTDLFLKSGIRAIDSKCKLDQPPGQH-NMRKSRFSDYGIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++F + +K A R +G+T NL+ LESRLD VYR F T ARQ V Sbjct: 60 KVRRIYG-ILERQFSNYYKRAARIKGNTGENLLKLLESRLDNTVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174 +H+ ++V R VNI SY+ VI++ +KS + + + + +L+E R+ +I V+ Sbjct: 119 SHKSIMVENRIVNIASYQVVPNTVIKIHKKSHKQSRIRASLELSEQQREKLAWIEVDPIK 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R P + + +L++E YS+ Sbjct: 179 LQGLFKRYPERSE---LSANIDEHLIIELYSK 207 >gi|118625961|emb|CAL39302.1| small ribosomal protein 4 [Chiloscyphus vermicularis] Length = 202 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNEIVDIPSYNCEPGDIIAIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|88607037|ref|YP_505552.1| 30S ribosomal protein S4 [Anaplasma phagocytophilum HZ] gi|123494635|sp|Q2GJ99|RS4_ANAPZ RecName: Full=30S ribosomal protein S4 gi|88598100|gb|ABD43570.1| ribosomal protein S4 [Anaplasma phagocytophilum HZ] Length = 204 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 2/198 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G NLWGR K P NTR+Y PG HG K S FG Q A QK K YY +S Sbjct: 8 KYRASRRLGVNLWGRSKDPFNTRNYPPGQHGAMGYKKLSSFGRQFVAHQKFKCYY-VVSS 66 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ R++F +A R +GDT NL+ LESRL ++VY A VPT+F+ARQ V+H+HV VNGR Sbjct: 67 RQLRNVFLKAYRKKGDTGDNLVGALESRLASVVYSAGLVPTMFSARQLVSHKHVTVNGRV 126 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI S+ K GD++EV++++ QL VL A Q ER VP+++ VN + + ++ +P Sbjct: 127 VNIPSFSVKPGDIVEVRKRASQLPMVLAAIQSQERRVPDHLDVNTEKLSVKYLAVP-KYS 185 Query: 188 DVPYPVIMQPNLVVEFYS 205 DVPYP M+ NLVVEFYS Sbjct: 186 DVPYPANMEVNLVVEFYS 203 >gi|166092869|gb|ABY82390.1| ribosomal protein S4 [Silene pseudoatocion] Length = 201 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFLYSSPPDELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|91208904|ref|YP_538937.1| ribosomal protein S4 [Gossypium hirsutum] gi|119368501|ref|YP_913189.1| ribosomal protein S4 [Gossypium barbadense] gi|325210932|ref|YP_004286006.1| ribosomal protein S4 [Gossypium thurberi] gi|90101660|sp|Q2L908|RR4_GOSHI RecName: Full=30S ribosomal protein S4, chloroplastic gi|125987751|sp|A0ZZ37|RR4_GOSBA RecName: Full=30S ribosomal protein S4, chloroplastic gi|85687418|gb|ABC73630.1| ribosomal protein S4 [Gossypium hirsutum] gi|119224863|dbj|BAF41249.1| Ribosomal protein S4 [Gossypium barbadense] gi|290775794|gb|ADD62290.1| ribosomal protein S4 [Gossypium thurberi] Length = 201 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR+V+I SYRCK D+I + + K + + ++P++++ + Sbjct: 116 ILVNGRTVDIPSYRCKPRDIISARDEQKSRTLIQNYLDSSTNEELPKHLTFHTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199 >gi|197294102|ref|YP_002149723.1| ribosomal protein S4 [Cicer arietinum] gi|197089790|gb|ACH41060.1| ribosomal protein S4 [Cicer arietinum] Length = 201 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G+ K P + G L Q SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGDLPGLTSKRP----TVGSELRNQSSSSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 V VNGR V+I SYRCK D+I K K + + + + + R ++P +++++ Sbjct: 116 VFVNGRIVDIPSYRCKPQDIITAKDDQKSITLIQNSLESSPREELPNHLTLHPSEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|139388096|ref|YP_001123288.1| ribosomal protein S4 [Barbarea verna] gi|139388912|ref|YP_001123639.1| ribosomal protein S4 [Lepidium virginicum] gi|139389098|ref|YP_001123816.1| ribosomal protein S4 [Nasturtium officinale] gi|152060546|sp|A4QKA7|RR4_BARVE RecName: Full=30S ribosomal protein S4, chloroplastic gi|152060553|sp|A4QLA8|RR4_LEPVR RecName: Full=30S ribosomal protein S4, chloroplastic gi|152060555|sp|A4QLT5|RR4_NASOF RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286487|dbj|BAF50112.1| ribosomal protein S4 [Barbarea verna] gi|134286842|dbj|BAF50463.1| ribosomal protein S4 [Lepidium virginicum] gi|134287021|dbj|BAF50640.1| ribosomal protein S4 [Nasturtium officinale] Length = 201 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|48527367|gb|AAT45816.1| small ribosomal protein 4 [Plagiochila deltoidea] Length = 202 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPNHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|118627498|emb|CAL39383.1| small ribosomal protein 4 [Lophozia sudetica] gi|118627542|emb|CAL39404.1| small ribosomal protein 4 [Protolophozia debiliformis] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKRKSQSIITQNINLFQKLKIPSHLTFELAQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|324999251|ref|ZP_08120363.1| 30S ribosomal protein S4 [Pseudonocardia sp. P1] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPMTRKSRRLKTDLVGGDQ-AFERRPYPPGQHGRIRIKETEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+ R+ ++EA R G T L+ LESRLD +VYRA T ARQ VNH H Sbjct: 59 GYG-LQEKQLRAYYEEAHRREGKTGDELLQILESRLDNVVYRAGLARTRRMARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 LVNG+ V+I S++ + D+I+V++KS+ + A + +R VP ++ V + Sbjct: 118 FLVNGKKVDIPSFKVSKYDIIDVREKSRNTDPFVIAKETQGDRPVPAWLQVVPSTLRILV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + L+VE+YS+ Sbjct: 178 HQLPERAQ---IDTQVTEQLIVEYYSK 201 >gi|295698627|ref|YP_003603282.1| ribosomal protein S4 [Candidatus Riesia pediculicola USDA] gi|291157482|gb|ADD79927.1| ribosomal protein S4 [Candidatus Riesia pediculicola USDA] Length = 206 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M + +K K+ RR G +L+ + + ++ PG HG +KS+ S +G+Q R KQ Sbjct: 1 MGRYLGAKLKLSRREGTDLFLKSNIRQIESKCKIDRFPGQHGA-KKSRLSDYGIQFREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG I E++FR + ++ + +G+T NL+ LE RLD +VYR T ARQ V Sbjct: 60 KLRRIYG-ILERQFRRYYMKSSKLKGNTGENLLVLLERRLDNVVYRIGLGSTRSEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175 +H+ +LVN + VNI SY+ D+IE + S + + +L+ +R+ ++ ++ + M Sbjct: 119 SHKSILVNKKIVNIPSYQVNIDDIIETSEFSSSQNRIKSSIELSQQREQVSWLEISSEKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R+P P + +L+VE YS+ Sbjct: 179 RGRVLRLPVRDD---LPTDINEHLIVELYSK 206 >gi|290487068|gb|ADD29918.1| ribosomal protein S4 [Ilex cornuta] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K + V + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSIVLVQNSLDSSPHEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|166092858|gb|ABY82383.1| ribosomal protein S4 [Silene cryptoneura] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIKNLIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|166092847|gb|ABY82376.1| ribosomal protein S4 [Silene sorensenis] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRTLIQNLIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118626035|emb|CAL41744.1| small ribosomal protein 4 [Scapania hyperborea] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---ECINLKINELLVVEYYSR 200 >gi|118626123|emb|CAL41758.1| small ribosomal protein 4 [Anastrophyllum minutum] gi|118626127|emb|CAL39361.1| small ribosomal protein 4 [Anastrophyllum minutum] gi|118626129|emb|CAL39362.1| small ribosomal protein 4 [Anastrophyllum minutum] gi|118626131|emb|CAL39363.1| small ribosomal protein 4 [Anastrophyllum minutum] gi|118626133|emb|CAL39364.1| small ribosomal protein 4 [Anastrophyllum minutum var. weberi] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|57238927|ref|YP_180063.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden] gi|58578860|ref|YP_197072.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden] gi|81557345|sp|Q5HBY1|RS4_EHRRW RecName: Full=30S ribosomal protein S4 gi|57161006|emb|CAH57912.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden] gi|58417486|emb|CAI26690.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 93/199 (46%), Positives = 130/199 (65%), Gaps = 2/199 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G +LWGR K P NTR+Y PG HG KPS FG Q A +K K YY IS Sbjct: 6 KYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFGAHKKFKFYYA-ISS 64 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ R++F +A + +GDT N + LES L +++Y + VPTIF+ARQ ++H+HVLVNG+ Sbjct: 65 KQMRNMFLKAYKKKGDTGDNFVGLLESMLSSVLYNSGLVPTIFSARQLISHKHVLVNGKV 124 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI SY K GD I++++K+ L VL A E+ VP+Y+ V+ ++R+P + Sbjct: 125 VNISSYSVKPGDTIKLREKAVNLPPVLAAIDAQEQKVPDYLEVDVKERSVKYLRVPKYYE 184 Query: 188 DVPYPVIMQPNLVVEFYSR 206 VPYP M+ NLV+EFYSR Sbjct: 185 -VPYPANMEVNLVIEFYSR 202 >gi|118626135|emb|CAL39365.1| small ribosomal protein 4 [Barbilophozia lycopodioides] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I +K K K + V + L ++ +P +++ + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIKSKQKSQSIVTQNINLFQKLKIPSHLTFELAQLRGYV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|281190726|ref|YP_003330963.1| ribosomal protein S4 [Parthenium argentatum] gi|269924839|gb|ACZ52712.1| ribosomal protein S4 [Parthenium argentatum] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I + + K A + + ++P ++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSRALIQNYLDSSPPEELPNHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118627512|emb|CAL39390.1| small ribosomal protein 4 [Lophozia sudetica] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + + L ++ +P +++ + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKRKSQSIITQNTNLFQKLKIPSHLTFELAQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|118625937|emb|CAL39290.1| small ribosomal protein 4 [Schistochilopsis incisa] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAVTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + + L ++ +P ++ + + + Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSVITKNLNLFQKLKIPSHLIFDFTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|71842275|ref|YP_277363.1| ribosomal protein S4 [Emiliania huxleyi] gi|90101658|sp|Q4G3A4|RR4_EMIHU RecName: Full=30S ribosomal protein S4, chloroplastic gi|60101518|gb|AAX13862.1| ribosomal protein S4 [Emiliania huxleyi] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ +K +I RR+G+ K + R+ PG HG +K KP+ +G++L KQK++ Sbjct: 1 MARYRGAKLRITRRLGDLPGLTSK--IAKRTSRPGQHGAVQK-KPTQYGIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+ + ++A +G T L+ LE RLD +++R PTI AARQ V+H+H Sbjct: 58 NYG-ISEKQLMNYIRQAKGIKGTTGTILLQLLEMRLDNLIFRLGLAPTIAAARQLVSHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VN V+I SY+C+ GDV+ V+ + + V + P+++ + N+ A Sbjct: 117 IQVNNTRVSIPSYQCQPGDVLSVRDNAASKSLVNTYLESPSLSQSPQHLDFDKKNLTAKV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + I + + V+E+YSR Sbjct: 177 LGIVDR---EWVALKLNELFVIEYYSR 200 >gi|166092838|gb|ABY82370.1| ribosomal protein S4 [Silene littorea] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199 >gi|139387254|ref|YP_001123375.1| ribosomal protein S4 [Capsella bursa-pastoris] gi|297837951|ref|XP_002886857.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata] gi|152060547|sp|A4QKJ4|RR4_CAPBU RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286575|dbj|BAF50199.1| ribosomal protein S4 [Capsella bursa-pastoris] gi|297332698|gb|EFH63116.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|118625967|emb|CAL39305.1| small ribosomal protein 4 [Jamesoniella undata] Length = 202 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY CK D I ++ K K + + + + L ++ +P +++ + + Sbjct: 117 ISINNGIVDIPSYNCKPDDTITIRNKEKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200 >gi|323341678|ref|ZP_08081911.1| 30S ribosomal protein S4 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464103|gb|EFY09296.1| 30S ribosomal protein S4 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 200 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K RR+ ++ + R Y PG HG+ R+ K S +GLQLR KQ+++ Sbjct: 1 MARIKGPVWKKARRLSFSI-LETGEELQRRDYAPGQHGKARRPKLSNYGLQLREKQRIRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+F + FK+A + G HN + LESRLD +VYR T ARQ VNH H Sbjct: 60 TYG-VTEKQFYNTFKKASKLEGVAGHNFLFMLESRLDNVVYRMNLSRTRRGARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY K G IEVK+ S+ +A++ ++ + A + +Y++ + D + Sbjct: 119 ILVDGKKVDIPSYIVKPGQTIEVKESSRSMAAIKDSLE-ANVSMVDYVTFDKDKFKGEYK 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + LVVEFY+R Sbjct: 178 RLPERSE---LNQEINEALVVEFYNR 200 >gi|239582581|dbj|BAH70342.1| ribosomal protein S4 [Cercidiphyllum japonicum] gi|239582602|dbj|BAH70347.1| ribosomal protein S4 [Cercidiphyllum japonicum] gi|239582623|dbj|BAH70352.1| ribosomal protein S4 [Cercidiphyllum japonicum] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH+H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHKH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG VNI SYRCK D+I + + K A + + ++P++++++ Sbjct: 116 ILVNGGIVNIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|156598174|gb|ABU85351.1| ribosomal protein S4 [Elaeis oleifera] Length = 201 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K K + A + ++P++++++ Sbjct: 116 ILVNGHIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|157689560|gb|ABV65336.1| ribosomal protein S4 [Staphylea colchica] Length = 201 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRPVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I + + K + + ++P++++++ Sbjct: 116 ILVNGCIVDIPSYRCKPQDIITARNEKKSRTLIQNYLDSSPHEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|89257421|gb|ABD64913.1| Chloroplast 30S ribosomal protein S4 [Brassica oleracea] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + + + A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLIQNLLESSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|110227081|ref|YP_665560.1| ribosomal protein S4 [Populus alba] gi|134093201|ref|YP_001109503.1| ribosomal protein S4 [Populus trichocarpa] gi|122224628|sp|Q14FF5|RR4_POPAL RecName: Full=30S ribosomal protein S4, chloroplastic gi|152060558|sp|A4GYR2|RR4_POPTR RecName: Full=30S ribosomal protein S4, chloroplastic gi|109945519|dbj|BAE97207.1| ribosomal protein S4 [Populus alba] gi|133712063|gb|ABO36706.1| ribosomal protein S4 [Populus trichocarpa] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRAGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRVMIQNSLDSFPQEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I S + + LVVE+YSR Sbjct: 176 NHIIDSK---WIGLKINELLVVEYYSR 199 >gi|139389803|ref|YP_001123464.1| ribosomal protein S4 [Crucihimalaya wallichii] gi|152060549|sp|A4QKT3|RR4_CRUWA RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286665|dbj|BAF50288.1| ribosomal protein S4 [Crucihimalaya wallichii] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLIDSSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|41323093|gb|AAR99776.1| small ribosomal protein 4 [Plagiochila buchtiniana] Length = 202 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNYIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|69216112|gb|AAZ03894.1| ribosomal protein S4 [Yucca schidigera] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----RSGSDLKNPLRSVKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|306486207|gb|ADM92745.1| ribosomal protein S4 [Davidia involucrata] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNSLDSSPHEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|91983994|ref|YP_567078.1| ribosomal protein S4 [Vitis vinifera] gi|122242803|sp|Q0ZJ18|RR4_VITVI RecName: Full=30S ribosomal protein S4, chloroplastic gi|91701652|gb|ABE47536.1| ribosomal protein S4 [Vitis vinifera] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLNYVRIAGKAKGATGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAGNEQKSRALIQNVFDSSSHEELPKHLTLHPFQFKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSN---WVGLKINELLVVEYYSR 199 >gi|159161162|ref|YP_001542449.1| ribosomal protein S4 [Ceratophyllum demersum] gi|172048121|sp|A8SEA5|RR4_CERDE RecName: Full=30S ribosomal protein S4, chloroplastic gi|148508445|gb|ABQ81452.1| ribosomal protein S4 [Ceratophyllum demersum] gi|227481121|emb|CAP62500.1| ribosomal protein S4 [Ceratophyllum demersum] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----SPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + + A + ++ + +VP+++++ A Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITTRDEQRSRALIQKSIDSSPHEEVPKHLTLYPFQYKALV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NKIIDSQ---WIGLKINELLVVEYYSR 199 >gi|149390542|ref|YP_001294186.1| ribosomal protein S4 [Buxus microphylla] gi|172048678|sp|A6MM38|RR4_BUXMI RecName: Full=30S ribosomal protein S4, chloroplastic gi|146762287|gb|ABQ45251.1| ribosomal protein S4 [Buxus microphylla] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|194132117|gb|ACF33371.1| ribosomal protein S4 [Gonystylus bancanus] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRA----RVGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYGLI-ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + K +A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIISVKDEQKSIALIQNYLDSSTHEELPKHLTLHTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199 >gi|162451363|ref|YP_001613730.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56'] gi|161161945|emb|CAN93250.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56'] Length = 203 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 5/205 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ R +G L G R Y PG HGQ RK K S F L+LR KQK++ Sbjct: 1 MSRYTGPRVKVMRALGVELPGLSARKTERRPYPPGQHGQARK-KLSEFALRLREKQKVRL 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +++ + +++ EA RS LI LE RLD +++RA F TI AARQ V H H Sbjct: 60 NYG-LTDTQLKTLMLEARRSDLAAGTKLIELLERRLDNVIFRAGFARTIPAARQLVAHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VL+NG+ V+I SYR G+ + V +K + +V+E + + P +++V+ D A Sbjct: 119 VLINGKRVDIPSYRVTIGETVSVSEKRRDHRTVVEGLARTDMEAPTWLAVDKDARQARVA 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 +P + P + L++E+YS Sbjct: 179 ALPD---ETSIPFPIAVQLIIEYYS 200 >gi|118626073|emb|CAL39340.1| small ribosomal protein 4 [Gymnomitrion corallioides] Length = 202 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKSKQKSQSIITKNVNLFQKLKIPGHLTFDSIELRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200 >gi|58616917|ref|YP_196116.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Gardel] gi|75432767|sp|Q5FH70|RS4_EHRRG RecName: Full=30S ribosomal protein S4 gi|58416529|emb|CAI27642.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Gardel] Length = 202 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 94/199 (47%), Positives = 131/199 (65%), Gaps = 2/199 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G +LWGR K P NTR+Y PG HG KPS FG Q A +K K YY IS Sbjct: 6 KYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFGAHKKFKFYYA-ISS 64 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ R++F +A + +GDT N + LES L +++Y + VPTIF+ARQ ++H+HVLVNG+ Sbjct: 65 KQMRNMFLKAYKKKGDTGDNFVGLLESMLSSVLYNSGLVPTIFSARQLISHKHVLVNGKV 124 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI SY K GD I++++K+ L SVL A E+ VP+Y+ V+ ++R+P + Sbjct: 125 VNISSYSVKPGDTIKLREKAVNLPSVLAAIDAQEQKVPDYLEVDVKERSVKYLRVPKYYE 184 Query: 188 DVPYPVIMQPNLVVEFYSR 206 VPYP M+ NLV+EFYSR Sbjct: 185 -VPYPANMEVNLVIEFYSR 202 >gi|118626101|emb|CAL39352.1| small ribosomal protein 4 [Sphenolobopsis pearsonii] Length = 202 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD I ++ K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNNTVDIPSYNCESGDTITIRNKQRSQSMITNNINLFQKSKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|297537975|ref|YP_003673744.1| 30S ribosomal protein S4 [Methylotenera sp. 301] gi|297257322|gb|ADI29167.1| ribosomal protein S4 [Methylotenera sp. 301] Length = 205 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ + KI R +G +L G + + R PG HG + + + S +G++L+ KQK++ Sbjct: 1 MSRLTGPRLKIMRSLGVDLPGLSRKTIEARPTPPGQHGMKAMRRRKSDYGVKLQEKQKLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++ R + EA + T N + LE RLD +V+RA F P+ +ARQ V H Sbjct: 61 FNYG-LTERQMRRLIIEARKGSEPTGDNFLQLLERRLDNVVFRAGFAPSAISARQLVTHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV++NGRSVNI S R K D I +K S ++ V+E D P+++ + + Sbjct: 120 HVILNGRSVNIPSIRVKLADEISLKVTSLKIPLVIETLAKPVLDRPDWLQWDETDKRIKV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205 +P + + P + VVE+YS Sbjct: 180 AHLPDADQ---VPFPIDVQQVVEYYS 202 >gi|253997477|ref|YP_003049541.1| 30S ribosomal protein S4 [Methylotenera mobilis JLW8] gi|253984156|gb|ACT49014.1| ribosomal protein S4 [Methylotenera mobilis JLW8] Length = 205 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 119/205 (58%), Gaps = 5/205 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ + K+ R +G +L G + + R PG HG + + + S FG++L KQK++ Sbjct: 1 MSRFIGPRLKVMRALGIDLPGLSRKTIEARPTPPGQHGNKASRKRRSDFGVKLLEKQKIR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E + R + +A + + T L+ LE R+D +V+RA F PT+ AARQ V+H Sbjct: 61 FNYG-LTETQMRRLILDARKGKEPTGERLLQLLERRMDNVVFRAGFAPTVIAARQLVSHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+++NG+ NI S R GD I +K KSK + V+E + + PE+++ D +A Sbjct: 120 HLMLNGKPANIPSIRLNVGDEISIKAKSKNIPMVVETIKQPALERPEWLAWEADKQLAKV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 +P+ + DVP+PV + LVVE+Y Sbjct: 180 AHLPA-ITDVPFPVDV--QLVVEYY 201 >gi|118626021|emb|CAL41740.1| small ribosomal protein 4 [Syzygiella autumnalis] Length = 202 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + S+ + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTFKSKSSF---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRFGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD I ++ K K + + + + L ++ +P +++ + + Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKIKIPSHLTFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|118626083|emb|CAL39345.1| small ribosomal protein 4 [Pseudomarsupidium decipiens] Length = 202 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTEQQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ G++I +K K K + + L + +P +++++ ++ Sbjct: 117 ISVNNDMVDIPSYNCEPGNIITIKNKRKSQLIITKNINLFQNLKIPSHLTLDSIQLLGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|166092890|gb|ABY82404.1| ribosomal protein S4 [Viscaria vulgaris] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K + L+ ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRTLIKNFIDLSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|75764761|ref|ZP_00744159.1| SSU ribosomal protein S4P [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487751|gb|EAO51569.1| SSU ribosomal protein S4P [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 212 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK++ Sbjct: 1 MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++FR F +A + G N + LE+RLD +VYR T AARQ VNH H Sbjct: 60 MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++V+G V+I SYR K I V++KS L V EA ++ VPEY++ + D + AT+ Sbjct: 119 IMVDGARVDIPSYRVKPNQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177 Query: 181 RIPSSLK 187 R + Sbjct: 178 RHAERAE 184 >gi|292559510|ref|YP_003540933.1| 30S ribosomal protein S4 [Phoenix dactylifera] gi|290790918|gb|ADD63173.1| 30S ribosomal protein S4 [Phoenix dactylifera] gi|294620579|gb|ADF28148.1| 30S ribosomal protein S4 [Phoenix dactylifera] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|290487066|gb|ADD29917.1| ribosomal protein S4 [Ehretia acuminata] Length = 201 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K + + + + +P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRTLIQNSLDSSPHEGLPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118625971|emb|CAL39307.1| small ribosomal protein 4 [Gymnocoleopsis multiflora] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSISNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVSIARKAKGSTGQVLLQLLEMRLDNTIFRLGIAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SY C+ GD+I +K K K + + + ++ +P +++ + + + Sbjct: 117 ILVNSNLVDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQ---RVNREWVNLKINELLVVEYYSR 200 >gi|262400804|gb|ACY66293.1| ribosomal protein S4 [Brassica napus] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V + A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLESSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|296168684|ref|ZP_06850433.1| 30S ribosomal protein S4 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896593|gb|EFG76234.1| 30S ribosomal protein S4 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPITRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+I+V+ S A + A +R +P ++ V + Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDGSLNTVPFQIARETAGDRPIPSWLQVVGERQRILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VEFYS+ Sbjct: 178 HQLPERAQ---IDVPLAEQLIVEFYSK 201 >gi|157689422|gb|ABV65267.1| ribosomal protein S4 [Berberidopsis corallina] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSKALIQNYLDSSPHEELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|110456717|gb|ABG74820.1| ribosomal protein S4 [Jasminum subhumile] Length = 203 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KSP G L Q R K S + ++L KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKSP----KAGSDLRKQSRSRKKSQYRIRLEEKQKLCF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG + E + + A +++G T L+ LE RLD I++R TI AARQ V HRH Sbjct: 57 HYG-LREYQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVTHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+ SYRCK D+I K K + + + +++P +++++ Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|41323115|gb|AAR99787.1| small ribosomal protein 4 [Plagiochila frondescens] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IERSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMCIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSVVTKNINSFQKLKIPSHLTFDSTQLPGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|323149221|ref|YP_004222050.1| ribosomal protein S4 [Coccomyxa sp. C-169] gi|317467277|gb|ADV29898.1| ribosomal protein S4 [Coccomyxa sp. C-169] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+GE PK P + PG HG+ K Y G++L+ KQK++ Sbjct: 1 MSRYRGPRLRIVRRLGELPGLTPKLP--KKQAPPGQHGKTPKKLSQY-GIRLQEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E + +EA R +G T L+ LE RLD V+R PTI AARQ + H H Sbjct: 58 NYG-ITESQLIRYVREARRVKGSTGEILLQLLEMRLDNTVFRLGIAPTIAAARQLIRHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 VLVN + I SY+CK D + ++Q+ + V ++ +P ++S D + Sbjct: 117 VLVNNQKTTIPSYQCKGKDAVSIQQRKQSRELVARFMADASQSSLPPHLSFTKDTLTGVV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVEFYSR Sbjct: 177 ATSIDRQ---SVGLKLNELLVVEFYSR 200 >gi|139389644|ref|YP_001123201.1| ribosomal protein S4 [Arabis hirsuta] gi|139390154|ref|YP_001123727.1| ribosomal protein S4 [Lobularia maritima] gi|152060545|sp|A4QK20|RR4_ARAHI RecName: Full=30S ribosomal protein S4, chloroplastic gi|152060554|sp|A4QLJ6|RR4_LOBMA RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286399|dbj|BAF50025.1| ribosomal protein S4 [Arabis hirsuta] gi|134286931|dbj|BAF50551.1| ribosomal protein S4 [Lobularia maritima] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|86438902|emb|CAJ55413.1| small ribosomal protein 4 [Plagiochila nobilis] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ G++I ++ + K +++ + ++ VP +++ + + + Sbjct: 117 ISINDDIVDIPSYNCEPGEIITIRNRQKSQSAITKNINSFQKLKVPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + ++ LVVE+YSR Sbjct: 177 NQMINR---EWINLKIKELLVVEYYSR 200 >gi|210624083|ref|ZP_03294183.1| hypothetical protein CLOHIR_02139 [Clostridium hiranonis DSM 13275] gi|210153216|gb|EEA84222.1| hypothetical protein CLOHIR_02139 [Clostridium hiranonis DSM 13275] Length = 198 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59 M+K + K RR+G N+ G PK+ G R K S +G QL KQ++K Sbjct: 1 MAKMMGPRFKQCRRLGLNVCGHPKAMDRA------ERGTSRADKKLSPYGTQLLEKQRLK 54 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG + EK+F + +A++S+ T LI LE RLD IVYR +I ARQ V H Sbjct: 55 AYYGVL-EKQFANYVHKAEKSKESTGTVLIQLLECRLDNIVYRLGLASSIRQARQMVVHG 113 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LVNG+ V+ S+ GDV+ +++KS+ A E + +E + YI N + T Sbjct: 114 HILVNGKKVDRPSFGLNVGDVVSLREKSQSNAMFKENFENSELNTLPYIEKNMEKFSGTL 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P + P+ + LVVE+YS+ Sbjct: 174 IKRPERNE---IPIEINEILVVEYYSK 197 >gi|15610594|ref|NP_217975.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Rv] gi|15843053|ref|NP_338090.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis CDC1551] gi|31794634|ref|NP_857127.1| 30S ribosomal protein S4 [Mycobacterium bovis AF2122/97] gi|121639378|ref|YP_979602.1| 30S ribosomal protein S4 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663323|ref|YP_001284846.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Ra] gi|148824668|ref|YP_001289422.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis F11] gi|167966775|ref|ZP_02549052.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Ra] gi|215405497|ref|ZP_03417678.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 02_1987] gi|215413372|ref|ZP_03422056.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 94_M4241A] gi|215428965|ref|ZP_03426884.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T92] gi|215432429|ref|ZP_03430348.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis EAS054] gi|215447795|ref|ZP_03434547.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T85] gi|218755236|ref|ZP_03534032.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis GM 1503] gi|219559526|ref|ZP_03538602.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T17] gi|224991874|ref|YP_002646563.1| 30S ribosomal protein S4 [Mycobacterium bovis BCG str. Tokyo 172] gi|253800503|ref|YP_003033504.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 1435] gi|254366059|ref|ZP_04982104.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis str. Haarlem] gi|254552561|ref|ZP_05143008.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188513|ref|ZP_05765987.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis CPHL_A] gi|260202641|ref|ZP_05770132.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T46] gi|260206829|ref|ZP_05774320.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis K85] gi|289445058|ref|ZP_06434802.1| SSU ribosomal protein S4 [Mycobacterium tuberculosis T46] gi|289449162|ref|ZP_06438906.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis CPHL_A] gi|289555729|ref|ZP_06444939.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 605] gi|289571692|ref|ZP_06451919.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T17] gi|289576194|ref|ZP_06456421.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis K85] gi|289747291|ref|ZP_06506669.1| ribosomal protein S4 [Mycobacterium tuberculosis 02_1987] gi|289752182|ref|ZP_06511560.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T92] gi|289755591|ref|ZP_06514969.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis EAS054] gi|289759621|ref|ZP_06518999.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T85] gi|289763640|ref|ZP_06523018.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis GM 1503] gi|297636117|ref|ZP_06953897.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis KZN 4207] gi|297733117|ref|ZP_06962235.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis KZN R506] gi|298526942|ref|ZP_07014351.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 94_M4241A] gi|306777805|ref|ZP_07416142.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu001] gi|306782524|ref|ZP_07420861.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu002] gi|306786343|ref|ZP_07424665.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu003] gi|306790712|ref|ZP_07429034.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu004] gi|306795240|ref|ZP_07433542.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu005] gi|306799430|ref|ZP_07437732.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu006] gi|306805276|ref|ZP_07441944.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu008] gi|306809462|ref|ZP_07446130.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu007] gi|306969570|ref|ZP_07482231.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu009] gi|306973924|ref|ZP_07486585.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu010] gi|307081633|ref|ZP_07490803.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu011] gi|307086239|ref|ZP_07495352.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu012] gi|313660448|ref|ZP_07817328.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis KZN V2475] gi|6094181|sp|O06325|RS4_MYCTU RecName: Full=30S ribosomal protein S4 gi|32700063|sp|P45811|RS4_MYCBO RecName: Full=30S ribosomal protein S4 gi|152112232|sp|A1KPE4|RS4_MYCBP RecName: Full=30S ribosomal protein S4 gi|172047916|sp|A5U8D4|RS4_MYCTA RecName: Full=30S ribosomal protein S4 gi|254764600|sp|C1AHR6|RS4_MYCBT RecName: Full=30S ribosomal protein S4 gi|2104381|emb|CAB08724.1| PROBABLE 30S RIBOSOMAL PROTEIN S4 RPSD [Mycobacterium tuberculosis H37Rv] gi|13883397|gb|AAK47904.1| ribosomal protein S4 [Mycobacterium tuberculosis CDC1551] gi|31620231|emb|CAD95674.1| PROBABLE 30S RIBOSOMAL PROTEIN S4 RPSD [Mycobacterium bovis AF2122/97] gi|121495026|emb|CAL73512.1| Probable 30S ribosomal protein S4 rpsD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151572|gb|EBA43617.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis str. Haarlem] gi|148507475|gb|ABQ75284.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Ra] gi|148723195|gb|ABR07820.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis F11] gi|224774989|dbj|BAH27795.1| 30S ribosomal protein S4 [Mycobacterium bovis BCG str. Tokyo 172] gi|253322006|gb|ACT26609.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 1435] gi|289417977|gb|EFD15217.1| SSU ribosomal protein S4 [Mycobacterium tuberculosis T46] gi|289422120|gb|EFD19321.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis CPHL_A] gi|289440361|gb|EFD22854.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 605] gi|289540625|gb|EFD45203.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis K85] gi|289545446|gb|EFD49094.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T17] gi|289687819|gb|EFD55307.1| ribosomal protein S4 [Mycobacterium tuberculosis 02_1987] gi|289692769|gb|EFD60198.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T92] gi|289696178|gb|EFD63607.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis EAS054] gi|289711146|gb|EFD75162.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis GM 1503] gi|289715185|gb|EFD79197.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T85] gi|298496736|gb|EFI32030.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 94_M4241A] gi|308213890|gb|EFO73289.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu001] gi|308324841|gb|EFP13692.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu002] gi|308329095|gb|EFP17946.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu003] gi|308332903|gb|EFP21754.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu004] gi|308336563|gb|EFP25414.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu005] gi|308340438|gb|EFP29289.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu006] gi|308344302|gb|EFP33153.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu007] gi|308348193|gb|EFP37044.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu008] gi|308352917|gb|EFP41768.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu009] gi|308356760|gb|EFP45611.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu010] gi|308360705|gb|EFP49556.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu011] gi|308364320|gb|EFP53171.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu012] gi|323717942|gb|EGB27131.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis CDC1551A] gi|326905304|gb|EGE52237.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis W-148] gi|328460234|gb|AEB05657.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 4207] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD ++YRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+++V+ KS A + A ER +P ++ V + Sbjct: 118 FNVNGVHVNVPSYRVSQYDIVDVRDKSLNTVPFQIARETAGERPIPSWLQVVGERQRVLI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE+YS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEYYSK 201 >gi|41323107|gb|AAR99783.1| small ribosomal protein 4 [Plagiochila diversifolia] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNYIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|166092893|gb|ABY82406.1| ribosomal protein S4 [Petrocoptis pyrenaica] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199 >gi|302337501|ref|YP_003802707.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293] gi|301634686|gb|ADK80113.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293] Length = 211 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 9/213 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ R L+ + K P+ + PG + R K S +G+QLR Sbjct: 1 MARYVGPQCRLCRAEKTKLFLKGERCHTGKCPIAKKKNPPGKGPRFRARKMSDYGIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+++ YG + EK+F+ F EA+R RG T NLI LE RLD +VYR +F + ARQ Sbjct: 61 KQKLRRMYG-LLEKQFKLTFVEAERLRGKTGENLIILLERRLDNVVYRLRFANSRKQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173 V+H H+LVNG+ V I SY ++GD IE+++ SK++ + +A + + V +I ++ D Sbjct: 120 LVSHGHILVNGKRVTIPSYVVRQGDEIEIREASKKMVVIKDALKEYTKSGVMPWIMLDPD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M + IP + L+VE YSR Sbjct: 180 AMKGSLSAIPRRNDVTDLS-DVNEQLIVELYSR 211 >gi|309812264|ref|ZP_07706019.1| ribosomal protein S4 [Dermacoccus sp. Ellin185] gi|308433569|gb|EFP57446.1| ribosomal protein S4 [Dermacoccus sp. Ellin185] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G K+ R + PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPITKKSRRLKTDLVGGDKN-FEMRPFPPGQHGRGRIQEKEYLH-QLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F +KEA R G T NL+ LESRLD ++YRA T AARQ V H H Sbjct: 59 TYG-VMEKQFVRYYKEAARRPGKTGENLLIILESRLDNVIYRAGLARTRRAARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG V++ SYR ++ D+I V++KS++ + A + ER VP ++ V + Sbjct: 118 FEVNGVRVDVPSYRVEQYDIITVREKSREAFPIQLARETFGERPVPAWLHVVPGTLQVLI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ + + L+VE YS+ Sbjct: 178 HQLPTREQ---IDSQLTEQLIVELYSK 201 >gi|307718230|ref|YP_003873762.1| 30S ribosomal protein S4 [Spirochaeta thermophila DSM 6192] gi|306531955|gb|ADN01489.1| 30S ribosomal protein S4 [Spirochaeta thermophila DSM 6192] Length = 211 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 114/213 (53%), Gaps = 9/213 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + + ++ R G L+ + PK + PG R KPS + +QLR Sbjct: 1 MGRYIGPQCRLCRAEGRKLFLKGERCYTPKCAMAKNRPKPGKAQYARMRKPSNYAIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ Y ++SE +FR F A++ G T NLI LE RLD IVYR F + ARQ Sbjct: 61 KQKLKRLY-NMSEAQFRRFFHMAEKMPGKTGDNLIILLERRLDNIVYRMHFASSRKQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173 V H HVLVNGR VNI SY +EGD +E+++KSK+L E+ + V ++ V+ D Sbjct: 120 IVGHGHVLVNGRKVNIPSYLVREGDRVEIREKSKKLLVFKESLKEYTRSGVMSWLEVDPD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V T IP ++ NL+VE YS+ Sbjct: 180 NLVGTVKMIPMRSDITDL-ADIKENLIVELYSK 211 >gi|48527409|gb|AAT45837.1| small ribosomal protein 4 [Plagiochila retrorsa] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|297840979|ref|XP_002888371.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata] gi|297334212|gb|EFH64630.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|41323089|gb|AAR99774.1| small ribosomal protein 4 [Plagiochila bifaria] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYSCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|41323119|gb|AAR99789.1| small ribosomal protein 4 [Plagiochila magna] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + + K ++V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNEQKSRSTVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|254234050|ref|ZP_04927375.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis C] gi|124599579|gb|EAY58683.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis C] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD ++YRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+++V+ KS A + A ER +P ++ V + Sbjct: 118 FNVNGAHVNVPSYRVSQYDIVDVRDKSLNTVPFQIARETAGERPIPSWLQVVGERQRVLI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE+YS+ Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEYYSK 201 >gi|167391807|ref|YP_001671685.1| ribosomal protein S4 [Carica papaya] gi|166344134|gb|ABY86784.1| ribosomal protein S4 [Carica papaya] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G + P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSQRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRMGMALTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I VK + K A + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDTITVKDEQKSRALIQSFLDSSTHEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199 >gi|41323123|gb|AAR99791.1| small ribosomal protein 4 [Plagiochila pulcherrima] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IERSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMCIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + + +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKNINSFHKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|118626165|emb|CAL39380.1| small ribosomal protein 4 [Anastrophyllum minutum var. minutum] Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY C+ GD+I ++ K K + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIXSYNCEPGDIITIRXKQKSQSIXTKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|121720615|ref|YP_001001536.1| ribosomal protein S4 [Nuphar advena] gi|69216106|gb|AAZ03891.1| ribosomal protein S4 [Nuphar advena] gi|84682206|gb|ABC60460.1| ribosomal protein S4 [Nuphar advena] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKP----RSASDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++ G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLRYVRIAGKANGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + ++P++++++ Sbjct: 116 ILVNGRLVDIPSYRCKPRDIITTKDKQRSRALIQNHMDSSSNAELPKHLTLHSLQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + L+VE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLIVEYYSR 199 >gi|166092875|gb|ABY82394.1| ribosomal protein S4 [Silene aegyptiaca] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGLVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199 >gi|315186307|gb|EFU20068.1| SSU ribosomal protein S4P [Spirochaeta thermophila DSM 6578] Length = 211 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 115/213 (53%), Gaps = 9/213 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + + ++ R G L+ + PK + PG R KPS + +QLR Sbjct: 1 MGRYIGPQCRLCRAEGRKLFLKGERCYTPKCAMTKNRPKPGKAQYARMRKPSNYAIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ Y ++SE +FR F A++ G T NLI LE RLD IVYR F + ARQ Sbjct: 61 KQKLKRLY-NMSEAQFRRFFHMAEKMPGRTGDNLIILLERRLDNIVYRMHFASSRKQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173 V+H HVLVNGR VNI SY +EGD +E+++KSK+L E+ + V ++ V+ D Sbjct: 120 IVDHGHVLVNGRKVNIPSYIVREGDRVEIREKSKKLLVFKESLKEYTRSGVMAWLEVDPD 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+V T IP ++ NL+VE YS+ Sbjct: 180 NLVGTVKMIPMRSDITDL-ADIKENLIVELYSK 211 >gi|48527413|gb|AAT45839.1| small ribosomal protein 4 [Plagiochila rutilans] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLNINELLVVEYYSR 200 >gi|118627510|emb|CAL39389.1| small ribosomal protein 4 [Harpanthus flotovianus] gi|118627530|emb|CAL41760.1| small ribosomal protein 4 [Geocalyx graveolens] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKVIRRLGALPGLTSKTLKPKSSY---VDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I VK K K + + + L ++ +P +++ N + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFNSIELRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200 >gi|118627518|emb|CAL39393.1| small ribosomal protein 4 [Calypogeia integristipula] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R +G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I V++K K + + + + ++ +P +++++ + Sbjct: 117 ISINNNIVDIPSYNCEPGDIITVREKQKSQSIITKNINVFQKLKIPSHLTIDSTELRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWIDLKINELLVVEYYSR 200 >gi|283794865|ref|YP_003359218.1| ribosomal protein S4 [Cryptomonas paramecium] gi|253981837|gb|ACT46754.1| ribosomal protein S4 [Cryptomonas paramecium] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR G K+ R + PG HG + + Y ++L KQK+K Sbjct: 1 MSRYRGAALRIVRRFGSLPGLTRKTT--NRKHRPGQHGSKHRRLSEY-AIRLDEKQKIKF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ + K+A R +G T L+ LE RLD V+R PTI AARQ V H H Sbjct: 58 NYG-LSERQLFNYVKKARRIQGSTGQALLQLLEMRLDNTVFRLGMAPTIPAARQLVTHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + +N + V+I SY+C GD+I++K K V + + P ++ ++ Sbjct: 117 IYLNTKRVSIPSYQCSAGDIIKIKDSPKSKKLVTDYISFPGLANAPTHLELDKTTFTGVV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE YSR Sbjct: 177 KGIVER---EWVGINLNELLVVEHYSR 200 >gi|139389266|ref|YP_001123032.1| ribosomal protein S4 [Aethionema grandiflorum] gi|152060543|sp|A4QJK1|RR4_AETGR RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286228|dbj|BAF49856.1| ribosomal protein S4 [Aethionema grandiflorum] Length = 201 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPKHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|118627502|emb|CAL39385.1| small ribosomal protein 4 [Douinia ovata] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN +V+I SY + GD+I + + K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDTVDIPSYNREPGDIITIGNRRKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|118626031|emb|CAL41742.1| small ribosomal protein 4 [Marsupella aquatica] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + V+ V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + Sbjct: 117 ISVDNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIELRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200 >gi|166092878|gb|ABY82396.1| ribosomal protein S4 [Silene atocioides] Length = 201 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQARSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199 >gi|157689514|gb|ABV65313.1| ribosomal protein S4 [Liquidambar styraciflua] Length = 201 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRHQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A V + R ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALVQNYLASSPREELPNHLTLHLFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199 >gi|242624335|ref|YP_003002253.1| 30S ribosomal protein S4 [Aureoumbra lagunensis] gi|239997443|gb|ACS36965.1| 30S ribosomal protein S4 [Aureoumbra lagunensis] Length = 204 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 113/209 (54%), Gaps = 9/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ K +I RR+GE K V TR PG H Q R ++ S + ++L+ KQK+ Sbjct: 1 MSRYRGPKIRIVRRLGELPGLTTK--VTTRETLPGQHRQSRLQRNNSSSYSIRLQEKQKL 58 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ++EK+ + KEA R RG T L+ LE RLD IV+R TI A+RQ +NH Sbjct: 59 RYNYG-LTEKQLFAYVKEAKRLRGATGSVLMQLLEMRLDNIVFRLGLANTIPASRQIINH 117 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 H+ VN R V+I S++C D+IEVK K V + + + + VP+Y+ D + Sbjct: 118 GHICVNDRKVDIPSFQCHPNDIIEVKNKQTSKQVVSKFLEKTDVKPVPDYLEFERDKIRG 177 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ S + + + LVVE+YSR Sbjct: 178 KVKRVIESRE---ANIDINELLVVEYYSR 203 >gi|66990670|emb|CAI29113.1| small ribosomal protein 4 [Plagiochila streimannii] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIIAIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200 >gi|66990668|emb|CAI29112.1| small ribosomal protein 4 [Plagiochila teysmannii] Length = 202 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNITSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200 >gi|189162273|ref|YP_001936519.1| ribosomal protein S4 [Fagopyrum esculentum subsp. ancestrale] gi|166065359|gb|ABY79734.1| ribosomal protein S4 [Fagopyrum esculentum subsp. ancestrale] Length = 198 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + R+ R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPRDLRN-------PSRSGKRSQYRIRLEEKQKLRF 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ F+ A +++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 54 HYG-ITERQLLKYFRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D++ + K K A V + ++P++++++ Sbjct: 113 VLVNGRIVDIPSYRCKPNDIVMSRDKQKSKALVQNYLDSSHSEELPKHLTLHPFPYKGVV 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 173 NQIIDNK---WVGLKINELLVVEYYSR 196 >gi|74027103|gb|AAZ94653.1| ribosomal protein S4 [Cucumis sativus] gi|115432806|gb|ABI97419.1| ribosomal protein S4 [Cucumis sativus] gi|115498306|gb|ABI98748.1| ribosomal protein S4 [Cucumis sativus] Length = 201 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KTGNDLKNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K + K + + +++P+++++ Sbjct: 116 ILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199 >gi|84494745|ref|ZP_00993864.1| 30S ribosomal protein S4 [Janibacter sp. HTCC2649] gi|84384238|gb|EAQ00118.1| 30S ribosomal protein S4 [Janibacter sp. HTCC2649] Length = 202 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G K+ + R + PG HG+RR + Y QL+ KQK + Sbjct: 1 MARYTGPITKKSRRLRVDLVGGDKN-FDLRPFPPGQHGRRRMQEKEYL-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +KEA G T N+++ LESRLD ++YRA T AARQ V H H Sbjct: 59 TYG-VMEKQFRRYYKEAANRPGKTGENILTILESRLDNVIYRAGLARTRRAARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ V++ SYR ++ D+I V+++S + + A + +R P ++ V ++ Sbjct: 118 FEVNGKRVDVPSYRVEQYDIITVRKQSVETFPLQLARETFGDRPTPAWLQVVPGSLQILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + I+ L+VEFYS+ Sbjct: 178 HSLPIRAQ---IDSILTEQLIVEFYSK 201 >gi|169794075|ref|YP_001718439.1| ribosomal protein S4 [Manihot esculenta] gi|157695887|gb|ABV66156.1| ribosomal protein S4 [Manihot esculenta] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-VTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRAMIQNDLDSSPQEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|52220812|ref|YP_086968.1| ribosomal protein S4 [Panax ginseng] gi|62287232|sp|Q68S04|RR4_PANGI RecName: Full=30S ribosomal protein S4, chloroplastic gi|51235315|gb|AAT98511.1| ribosomal protein S4 [Panax ginseng] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + + + + ++P++++++ Sbjct: 116 ILVNGRIVDIASYRCKPRDIITARDEENSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|326909395|ref|YP_004327664.1| ribosomal protein S4 [Hevea brasiliensis] gi|308523509|gb|ADO33559.1| ribosomal protein S4 [Hevea brasiliensis] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KVGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARAEQKSRAMIKNYLDSSPQEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|326200283|gb|ADZ52322.1| ribosomal protein S4 [Asclepias syriaca] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTNKRP----RAGNDPRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI AARQFVNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQFVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK GD+I VK + K A + ++ + +++P ++ + Sbjct: 116 ILVNGHIVDIPSYRCKPGDIITVKDEQKSKALIQKSLDSSSHQELPSHLILQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + ++ LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKIKELLVVEYYSR 199 >gi|48527371|gb|AAT45818.1| small ribosomal protein 4 [Plagiochila ensiformis] Length = 202 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + + +R +P ++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIITKNINSFQRLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|139389952|ref|YP_001123552.1| ribosomal protein S4 [Draba nemorosa] gi|152060551|sp|A4QL21|RR4_DRANE RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286754|dbj|BAF50376.1| ribosomal protein S4 [Draba nemorosa] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDPRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSTPEELPNHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|24213464|ref|NP_710945.1| 30S ribosomal protein S4 [Leptospira interrogans serovar Lai str. 56601] gi|45658677|ref|YP_002763.1| 30S ribosomal protein S4 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|26454650|sp|Q9XD10|RS4_LEPIN RecName: Full=30S ribosomal protein S4 gi|61215619|sp|Q72NI7|RS4_LEPIC RecName: Full=30S ribosomal protein S4 gi|24194236|gb|AAN47963.1| 30S ribosomal protein S4 [Leptospira interrogans serovar Lai str. 56601] gi|45601921|gb|AAS71400.1| 30S ribosomal protein S4 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 207 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT----RSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ KI RR G +L+ + N R PG+ +RK K S +G QLR KQ Sbjct: 1 MARYRGPVVKIMRREGVDLFLKSSYTFNKDKFHRKGPPGMP-TKRKGKVSEYGAQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR ++EA + G T L+ LE RLD +VYR F T AR F+ Sbjct: 60 KLKRAYG-LLEKQFRRYYEEASHAHGVTGEILLQLLERRLDNVVYRLGFAITRRQARNFI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174 HRH+LVNG V+I SYR GD +E+++K K + + + +L++ + +P ++S ++ N Sbjct: 119 AHRHILVNGERVDIPSYRLNVGDKVEIREKFKTSSFIADNIKLSQSLQGIPSWLSADYTN 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + ++ ++VE YS+ Sbjct: 179 FGGDVTALPERHH---IDLPVKEQVIVELYSK 207 >gi|75755661|ref|YP_319767.1| ribosomal protein S4 [Acorus calamus] gi|161622312|ref|YP_001586184.1| ribosomal protein S4 [Acorus americanus] gi|90101657|sp|Q3V532|RR4_ACOCL RecName: Full=30S ribosomal protein S4, chloroplastic gi|69216102|gb|AAZ03889.1| ribosomal protein S4 [Acorus americanus] gi|74381711|emb|CAI53796.1| ribosomal protein S4 [Acorus calamus] gi|160369855|gb|ABX38746.1| ribosomal protein S4 [Acorus americanus] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTSKGT----RPGSDLRNQFRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + + + R ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKVLIQNNMDSSTREELPKHLTLDSFQHKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|119713705|gb|ABL97755.1| ribosomal protein S4 [uncultured marine bacterium EB0_41B09] Length = 191 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 112/192 (58%), Positives = 145/192 (75%), Gaps = 1/192 (0%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +GEN+WGR P NTR+YGPG HG + + S +G+QLR KQK+K YYG+I EK+FR+IF Sbjct: 1 MGENIWGRENCPTNTRTYGPGQHGPKGVRRRSDYGVQLREKQKLKGYYGNIGEKQFRNIF 60 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 KEA S+GDTS NL+ LESRLD IVYR+ FVPT+FAARQF+NH+HV VNG VNI SY+ Sbjct: 61 KEAAASKGDTSENLLVLLESRLDAIVYRSNFVPTVFAARQFINHKHVKVNGSVVNIASYK 120 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 CK GD I+V +KS+ V+++ Q ERD+PEYI+++ AT++R PSS + +PYP + Sbjct: 121 CKPGDEIQVNEKSRSFPFVIDSVQKLERDLPEYINLDVKEFKATYIRYPSSDE-IPYPTM 179 Query: 195 MQPNLVVEFYSR 206 M P VVEFYSR Sbjct: 180 MSPGSVVEFYSR 191 >gi|118625935|emb|CAL39289.1| small ribosomal protein 4 [Jamesoniella oenops] Length = 202 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD I ++ K K + + + + L ++ +P ++ + + Sbjct: 117 ISVNKGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKVKIPSHLIFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|139390350|ref|YP_001122948.1| ribosomal protein S4 [Aethionema cordifolium] gi|152060542|sp|A4QJB7|RR4_AETCO RecName: Full=30S ribosomal protein S4, chloroplastic gi|134286143|dbj|BAF49772.1| ribosomal protein S4 [Aethionema cordifolium] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + V A ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPKHLTLHTFQYEGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199 >gi|149390356|ref|YP_001294354.1| ribosomal protein S4 [Dioscorea elephantipes] gi|172048696|sp|A6MMK9|RR4_DIOEL RecName: Full=30S ribosomal protein S4, chloroplastic gi|148668048|gb|ABR01432.1| ribosomal protein S4 [Dioscorea elephantipes] Length = 201 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDFKNQSRFGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTEQQLLRYVHIAGKAKGSTDQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + + + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITSKDKQRSKVLIQNSIESSPHEELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---LIGLKINELLVVEYYSR 199 >gi|85057521|ref|YP_456437.1| 30S ribosomal protein S4 [Aster yellows witches'-broom phytoplasma AYWB] gi|123518331|sp|Q2NJN5|RS4_AYWBP RecName: Full=30S ribosomal protein S4 gi|84789626|gb|ABC65358.1| SSU ribosomal protein S4P [Aster yellows witches'-broom phytoplasma AYWB] Length = 198 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S K+ RR+ ++ K ++ R+YGPG HGQ +K K S +G QL+ KQK++ Sbjct: 1 MSRYTGSLWKVSRRLNYSVSETGKE-LHKRAYGPGQHGQ-KKVKLSDYGFQLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FR F A + +G + LESRLD +VYR F T ARQ VNH H Sbjct: 59 TYG-VSEKQFRKTFDNASKLKGIHGEMFLVLLESRLDNVVYRLGFAKTRAQARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SYR K G + +++KSK L V EA ++ +Y+S++ + +V +V Sbjct: 118 ILVDGKKVDIASYRLKPGQTVTLREKSKNLNIVQEALN-SKFVRADYVSLDKE-LVGKYV 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + +P + L+VE+Y+R Sbjct: 176 RYPQRNEFLP---DINEQLIVEYYNR 198 >gi|48527393|gb|AAT45829.1| small ribosomal protein 4 [Plagiochila ovata] Length = 202 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A + +G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKVKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSTITKNINSFQKLKIPSHLNFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 177 NQIINR---EWINLKINELLVVEYYSR 200 >gi|41323135|gb|AAR99797.1| small ribosomal protein 4 [Plagiochila stricta] Length = 202 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +K K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|118625995|emb|CAL39319.1| small ribosomal protein 4 [Mnioloma fuscum] Length = 202 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKILKTKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R +G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARRVKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I VK+K K + + L ++ +P +++ + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITVKKKQKSQFIIGKNLNLFQKLKIPSHLTFDPTELRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---EWIDLKINELLVVEYYSR 200 >gi|156573732|gb|ABU85198.1| ribosomal protein S4 [Anethum graveolens] Length = 201 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T LI LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLIQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + A + + + +D +P+++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|50346784|ref|YP_053157.1| ribosomal protein S4 [Nymphaea alba] gi|62287256|sp|Q6EW46|RR4_NYMAL RecName: Full=30S ribosomal protein S4, chloroplastic gi|50250329|emb|CAF28595.1| ribosomal protein S4 [Nymphaea alba] Length = 201 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKP----RSASDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++ G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 57 HYG-LTERQLLRYVRIAGKANGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K A + + ++P++++++ Sbjct: 116 ILVNGRLVDIPSYRCKPRDIITTKDKQGSRALIQNHMDSSSNAELPKHLTLHSFQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + L+VE+YSR Sbjct: 176 NQIIDSK---WVGLKVNELLIVEYYSR 199 >gi|118626081|emb|CAL39344.1| small ribosomal protein 4 [Blepharidophyllum densifolium] Length = 202 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G ++ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSRTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVKNKQKSQSIITKNIHLFQKLKIPSHLTFDSTELRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|157689576|gb|ABV65344.1| ribosomal protein S4 [Trochodendron aralioides] Length = 201 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNYFDSSPHEELPKHLTLHSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|157689486|gb|ABV65299.1| ribosomal protein S4 [Heuchera sanguinea] Length = 201 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K + + ++P+Y++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRTLIQNYLDSSPHEELPKYLTLHPLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199 >gi|48527355|gb|AAT45810.1| small ribosomal protein 4 [Plagiochila asplenioides] Length = 202 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSYSD---RSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ITINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|48527391|gb|AAT45828.1| small ribosomal protein 4 [Plagiochila ovalifolia] Length = 202 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ITINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ S + + LVVE+YSR Sbjct: 177 NQMISR---EWINLKINELLVVEYYSR 200 >gi|66990678|emb|CAI29117.1| small ribosomal protein 4 [Plagiochila rubescens] Length = 202 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNLNSFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|113170431|ref|YP_717223.1| Rps4 [Ostreococcus tauri] gi|122228948|sp|Q0P3N2|RR4_OSTTA RecName: Full=30S ribosomal protein S4, chloroplastic gi|112806838|emb|CAL36345.1| Rps4 [Ostreococcus tauri] Length = 197 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59 M++ + KI RR+GE K P R+Y G HG S + ++L+ KQK++ Sbjct: 1 MARYRGPRVKIVRRLGELPGLTTKIP--NRNYPAGQHGPSSGMTKMSQYRVRLQEKQKLR 58 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SEK+ S + A R +G T L+ LE RLD +VYR F PTI AARQ+V+H Sbjct: 59 YNYG-VSEKQLLSYVRRARRMKGPTGELLLQMLEMRLDAVVYRLGFAPTIRAARQYVSHG 117 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 V VNG++V I SY+C G+VI+ A ++E ++ VP ++SV+ +N Sbjct: 118 LVTVNGQAVTIPSYQCSVGEVIKS-----NSAPIVEHAKTFGGVVPSHLSVDKNNATGKV 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + + + L++EFYSR Sbjct: 173 ERNVTRSQ---IGLTVNELLIIEFYSR 196 >gi|195952670|ref|YP_002120960.1| 30S ribosomal protein S4 [Hydrogenobaculum sp. Y04AAS1] gi|195932282|gb|ACG56982.1| RNA-binding S4 domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 207 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGR--PKSPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQ 56 M ++ + K+DRR G + G+ + R++ PG HG+ R++K + FGL+L KQ Sbjct: 1 MGRKIQAWSKVDRRFGVVVSGKLSGNKILTRRNFPPGQHGRTKGRRAKSTEFGLRLNEKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K YG + E +FR F +A +++G+T+ +I LE RLD +VYR T ARQFV Sbjct: 61 KLKMLYGGLRESQFRKYFDKASKAKGNTASVMIELLERRLDNVVYRLGIACTRRQARQFV 120 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 H H++VNG+ V+I SY+ GD+IEV SK + + + + L R VP ++ ++ DN Sbjct: 121 VHGHIMVNGKKVDIPSYQVNVGDIIEV--YSKDIPQIRQNLENLDPRSVPHWLEIDKDNF 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P KDV V + ++E+YSR Sbjct: 179 RGKVVDKP---KDVVLEVPINMQYIIEYYSR 206 >gi|41323085|gb|AAR99772.1| small ribosomal protein 4 [Plagiochila adiantoides] Length = 202 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + + L ++ +P ++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIITKNINLFQKLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|118625989|emb|CAL39316.1| small ribosomal protein 4 [Plagiochila sp. de Roo s.n.] Length = 202 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|194099938|ref|YP_002003076.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae NCCP11945] gi|193935228|gb|ACF31052.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae NCCP11945] gi|316985689|gb|EFV64635.1| ribosomal protein S4 [Neisseria meningitidis H44/76] gi|317165390|gb|ADV08931.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae TCDC-NG08107] Length = 196 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 121/200 (60%), Gaps = 10/200 (5%) Query: 12 DRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 RR G +L+ + + ++++ PG HG +K + S +GLQLR KQK+++ YG + E Sbjct: 2 ARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQKIRRIYGVL-E 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++FR F EADR +G T L+ LESRLD +VYR F T ARQ V+H+ ++VNG+ Sbjct: 60 RQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQV 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI S++ K GDV+ V++K+K+ + EA LA + +P ++SV+ D + F +P Sbjct: 120 VNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKLEGVFKNMPDRS 179 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVEFYS+ Sbjct: 180 E---LTGDINEQLVVEFYSK 196 >gi|78103255|ref|YP_358580.1| ribosomal protein S4 [Phalaenopsis aphrodite subsp. formosana] gi|90101665|sp|Q3BAN8|RR4_PHAAO RecName: Full=30S ribosomal protein S4, chloroplastic gi|58802785|gb|AAW82505.1| ribosomal protein S4 [Phalaenopsis aphrodite subsp. formosana] Length = 201 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRPRSR----SDLQTQLRFGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + R ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPLDIITTKDKERSKALIQNYLVSSPRGELPNHLTIDSLQYKGFV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|41323137|gb|AAR99798.1| small ribosomal protein 4 [Plagiochila superba] Length = 202 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + +R +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRVKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|166092896|gb|ABY82408.1| ribosomal protein S4 [Agrostemma githago] Length = 201 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLFKYVRIARKAKGSTGQVLXXLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNYLDSSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118626147|emb|CAL39371.1| small ribosomal protein 4 [Anastrepta orcadensis] Length = 202 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGLRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNNTVDIPSYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200 >gi|46447001|ref|YP_008366.1| 30S ribosomal protein S4 [Candidatus Protochlamydia amoebophila UWE25] gi|61215574|sp|Q6MBF8|RS4_PARUW RecName: Full=30S ribosomal protein S4 gi|46400642|emb|CAF24091.1| probable 30S ribosomal protein S4 [Candidatus Protochlamydia amoebophila UWE25] Length = 206 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 125/195 (64%), Gaps = 2/195 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ SK++I RR G N++GR ++P+ + PG+HG RR+ K S FGLQL KQK+K Sbjct: 1 MARYTGSKNRIARRYGVNIFGRARNPLLHKPNPPGVHGARRR-KKSDFGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ + +K+A R G+T+ + LE RLD +VYR KF TIFAA+Q V H H Sbjct: 60 IYGMLSEKQLVAYYKKALRLEGNTASHFAEMLECRLDNLVYRLKFGHTIFAAQQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+ S++ K G VI +K+KS+++ + EA R VPEY+S + ++ + Sbjct: 120 ILVDGKKVDRRSFQVKPGMVISIKEKSRKIKIIAEALDNPARSVPEYLSSDKEHFSGQLL 179 Query: 181 RIPSSLKDVPYPVIM 195 P + +P+P+ + Sbjct: 180 AKPI-PEQMPWPIEI 193 >gi|77019135|emb|CAH60174.1| chloroplast 30S ribosomal protein S4 [Funaria hygrometrica] Length = 198 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 9/204 (4%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S Q K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGVLPGLTNKTPQLKSSSP----NQSAAKKISQYRIRLEEKQKLRFHYG 56 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLV Sbjct: 57 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLV 115 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I VK + K A + + +++ VP +++ + +I Sbjct: 116 NDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKAKVPNHLTFDSTQKKGLVNQI 175 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 ---LDRESIGLKINELLVVEYYSR 196 >gi|299890916|gb|ADJ57415.1| 30S ribosomal protein S4 [uncultured prymnesiophyte C19847] Length = 209 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN-----TRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ +K ++ RR+G+ K + PG HG ++K + + ++L K Sbjct: 1 MARYTGAKLRVTRRLGDLPGFTSKKVNRPSDQGKSTQRPGQHGAT-QTKLTQYAIRLEEK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK++ YG +SEK+ + K++ + +G T + L+ LE RLD IV+R PTI AARQ Sbjct: 60 QKLRFNYG-LSEKQLMNYIKQSKKIKGATGNVLLQLLEMRLDNIVFRLGLAPTIAAARQL 118 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174 VNH+H+LVN +I SY+C+ GD + +K V++ +L A ++P+++ N + Sbjct: 119 VNHKHILVNNSCTSIPSYQCQPGDTLSIKDNKASKQLVVKNLELPALSNIPQHLEFNKKD 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A + I + + V+E+YSR Sbjct: 179 LTAKVLGIIDR---EWVALKLNELFVIEYYSR 207 >gi|66990680|emb|CAI29118.1| small ribosomal protein 4 [Plagiochila boryana] Length = 200 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + +R +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|261749446|ref|YP_003257132.1| 30S ribosomal protein S4 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497539|gb|ACX83989.1| 30S ribosomal protein S4 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 202 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59 M+K K KI R+ GE ++G K R Y G HG RR+ K S + +QL KQK K Sbjct: 1 MAKYIGPKTKISRKFGECIYGEDKY-FERRKYPSGQHGNNRRRGKRSEYFIQLTEKQKAK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E++F +F EA R +G T L+ ESRLD IV+R KF P+ +ARQ V+HR Sbjct: 60 YTYG-ILERQFEKLFLEAARKKGVTGELLLQACESRLDNIVFRLKFSPSRSSARQIVSHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ VN R VN+ S+R + GD I +++KSK+ +LE+ + E++ ++ NM F Sbjct: 119 HITVNDRIVNVPSFRLRPGDKIGIREKSKKHPVILESISNKVGSLVEWLILDEKNMFGVF 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + P ++ L+VE YS+ Sbjct: 179 RIMPKRKQ---IPENIKEQLIVELYSK 202 >gi|47458904|ref|YP_015766.1| 30S ribosomal protein S4 [Mycoplasma mobile 163K] gi|61215559|sp|Q6KIM1|RS4_MYCMO RecName: Full=30S ribosomal protein S4 gi|47458232|gb|AAT27555.1| 30s ribosomal protein s4 [Mycoplasma mobile 163K] Length = 199 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ K RR G ++ K R Y PG HGQ R+ K S FG+ KQK+ Sbjct: 1 MSRYVGPVFKRSRRFGFSILETGKEFVKGKQRQYAPGQHGQ-RRGKLSDFGIHQLEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG I+E++FR+ F A++++G T + LESRLD IVYR F T ARQ VNH Sbjct: 60 RFMYG-INERQFRNTFAIANKAKGVTGTAFLQLLESRLDNIVYRMGFAQTRRQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H L+NG+ +I S R GD IE++ KS+ + ++L + + R V +I D Sbjct: 119 GHFLLNGKKADIPSQRINVGDTIELRAKSQNVPTILASIET--RVVAPWIE--KDKFKGK 174 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R+P + + L+VEFY++ Sbjct: 175 LIRVPERKE---LNQEINEALIVEFYNK 199 >gi|290487072|gb|ADD29920.1| ribosomal protein S4 [Meliosma aff. cuneifolia Moore 333] Length = 201 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGKVLLQLLEMRLDNILFRLGMSSTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRC D+I K + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCNPRDLITAKDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|48527387|gb|AAT45826.1| small ribosomal protein 4 [Plagiochila longiramea] Length = 202 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + + ++ +P ++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIITKNINSFQKLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|48527395|gb|AAT45830.1| small ribosomal protein 4 [Plagiochila patentissima] Length = 202 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ILINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|91214131|ref|YP_538753.1| ribosomal protein S4 [Glycine max] gi|90101669|sp|Q2PMU5|RR4_SOYBN RecName: Full=30S ribosomal protein S4, chloroplastic gi|83595732|gb|ABC25113.1| ribosomal protein S4 [Glycine max] Length = 201 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P L Q R SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGSLPGLTSKRPTVKSE----LRNQSRSSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ +NHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPQARQLINHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNG V+I SYRCK D+I K + K + A R+ +P +++++ Sbjct: 116 VLVNGHIVDIPSYRCKPQDIITAKDEQKSKTLIQNYLDSAPREKLPNHLTLHPFQYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199 >gi|68171571|ref|ZP_00544946.1| Ribosomal protein S4, bacterial and organelle form [Ehrlichia chaffeensis str. Sapulpa] gi|88657888|ref|YP_507703.1| 30S ribosomal protein S4 [Ehrlichia chaffeensis str. Arkansas] gi|123492898|sp|Q2GFT0|RS4_EHRCR RecName: Full=30S ribosomal protein S4 gi|67999012|gb|EAM85688.1| Ribosomal protein S4, bacterial and organelle form [Ehrlichia chaffeensis str. Sapulpa] gi|88599345|gb|ABD44814.1| ribosomal protein S4 [Ehrlichia chaffeensis str. Arkansas] Length = 202 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 98/199 (49%), Positives = 135/199 (67%), Gaps = 2/199 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G NLWGR K P NTR+Y PG HG KPS FG Q A +K K YY I+ Sbjct: 6 KYRASRRLGVNLWGRSKDPFNTRNYPPGQHGGMGYKKPSDFGKQFAAHKKFKFYYA-INS 64 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ R+IF +A + RGDT N + LESRL +++Y + VPTIF+ARQ ++H+HVLVNG++ Sbjct: 65 KQMRNIFLKAYKKRGDTGDNFVGLLESRLSSVLYNSGLVPTIFSARQLISHKHVLVNGKT 124 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI SY K GDV+ +K+K+K L +V+ A Q E+ VP+Y+ V+ ++R+P + Sbjct: 125 VNISSYVVKVGDVVTLKEKAKNLPAVVFAVQSQEQKVPDYLEVDTQEKSIRYLRVPKYCE 184 Query: 188 DVPYPVIMQPNLVVEFYSR 206 VPYP M+ NLV+EFYSR Sbjct: 185 -VPYPATMEVNLVIEFYSR 202 >gi|310659475|ref|YP_003937196.1| 30S ribosomal protein S4 [Clostridium sticklandii DSM 519] gi|308826253|emb|CBH22291.1| 30S ribosomal subunit protein S4 [Clostridium sticklandii] Length = 207 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ S ++ RR G L+ + K R+Y PG HGQ RK K S +G QLR Sbjct: 1 MARYTDSSCRLCRREGMKLFLKGDRCYTDKCAFAKRAYAPGQHGQGRK-KVSNYGEQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + E +FR F+ A++ +G NL++ LE RLD +VYR + ARQ Sbjct: 60 KQKVKRIYGVL-ETQFRLTFERAEKMQGMAGENLLNLLERRLDNVVYRMGLAASRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H +NG NI S GDVI VK+ S+ + + + R P+++ V+ ++ Sbjct: 119 LVRHGHFNLNGHKANIPSMTISVGDVITVKETSRSSVKIKSLVENSTRVAPKWLDVSLES 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M A V P+ + + +L+VE YS+ Sbjct: 179 MSAKMVANPTR---EDIDLEVAEHLIVELYSK 207 >gi|118626091|emb|CAL41754.1| small ribosomal protein 4 [Cephalozia lunulifolia] gi|118626099|emb|CAL39351.1| small ribosomal protein 4 [Cephalozia lunulifolia] Length = 202 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGVLPGLTGKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQSLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + Sbjct: 117 ISMNNNIVDIPSYNCEPGDIITIRNKQKSKSMITKNLNLFQKLKMPSHLTFDLTQLEGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200 >gi|222474941|ref|YP_002563356.1| 30S ribosomal protein S4 [Anaplasma marginale str. Florida] gi|222419077|gb|ACM49100.1| 30S ribosomal protein S4 [Anaplasma marginale str. Florida] Length = 250 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 96/198 (48%), Positives = 130/198 (65%), Gaps = 2/198 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G NLWGR K PV TR+Y PG HG K S FG Q A QK K YY +S Sbjct: 54 KYRASRRLGVNLWGRSKDPVATRNYPPGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 112 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ R+ F A +GDT NL+ LESRL +VY A FVPT+F+ARQ V+H+HV VNG+ Sbjct: 113 KQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 172 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI S+ K GDV+++++++ +L VL A Q ER VP+++ V+ A ++R+P + Sbjct: 173 VNIPSFSVKPGDVVQIRERATELPMVLAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE 232 Query: 188 DVPYPVIMQPNLVVEFYS 205 VPYP M+ NLVVEF+S Sbjct: 233 -VPYPANMEVNLVVEFFS 249 >gi|48527357|gb|AAT45811.1| small ribosomal protein 4 [Plagiochila banksiana] Length = 202 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTVKSKSSYXD---RSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSLTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + Sbjct: 117 ISINNNIVDIPSYNCESGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSPQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|41323087|gb|AAR99773.1| small ribosomal protein 4 [Plagiochila aerea] Length = 202 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD +YR PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIYRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P ++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|48527401|gb|AAT45833.1| small ribosomal protein 4 [Plagiochila peculiaris] Length = 202 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTTNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|289066816|ref|YP_003434334.1| ribosomal protein S4 [Vigna radiata] gi|259020003|gb|ACV90201.1| ribosomal protein S4 [Vigna radiata] Length = 201 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + Q R SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGYLPGLTSKKPTVKNEF----RNQSRFSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + +++G T L+ LE RLD I++R TI ARQF+NHRH Sbjct: 57 HYG-LTERQLLKYVRISGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPQARQFINHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I K + K + A + +P +++V+ Sbjct: 116 VLVNGRIVDIPSYRCKPQDIITAKDEQKSKTLIQNYLDSAPHEKLPNHLTVHPFQYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199 >gi|222103442|gb|ACM44250.1| small ribosomal protein subunit 4 [Bryoxiphium norvegicum] Length = 202 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R VNI SYRCK D I +K + K A +++ +++ VP +++ N Sbjct: 117 ILVNDRIVNIPSYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESINLKINELLVVEYYSR 200 >gi|48527377|gb|AAT45821.1| small ribosomal protein 4 [Plagiochila fuscolutea] Length = 202 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P ++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|41323127|gb|AAR99793.1| small ribosomal protein 4 [Plagiochila raddiana] Length = 202 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SY C+ GD+I + K K V + ++ +P +++ + + + Sbjct: 117 ILVNNDIVDIPSYNCEPGDIITIGNKQKSRVIVTKNINSFQKLKIPNHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|330850632|ref|YP_004376513.1| ribosomal protein S4 [Ptilidium pulcherrimum] gi|302024761|gb|ADK89607.1| ribosomal protein S4 [Ptilidium pulcherrimum] Length = 202 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVCIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N +VNI SY CK GD+I +K + K + + L ++ +P +++ + + + Sbjct: 117 ISINNDTVNIPSYNCKPGDIITIKNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 177 NQMIHR---EWIHLKINELLVVEYYSR 200 >gi|323149084|ref|YP_004222648.1| ribosomal protein S4 [Anthriscus cerefolium] gi|289645577|gb|ADD13640.1| ribosomal protein S4 [Anthriscus cerefolium] Length = 201 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQARSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + A + + + +D +P+++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199 >gi|116327250|ref|YP_796970.1| 30S ribosomal protein S4 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116327290|ref|YP_797010.1| 30S ribosomal protein S4 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332096|ref|YP_801814.1| 30S ribosomal protein S4 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280174|sp|Q04PW4|RS4_LEPBJ RecName: Full=30S ribosomal protein S4 gi|122284903|sp|Q055B8|RS4_LEPBL RecName: Full=30S ribosomal protein S4 gi|116119994|gb|ABJ78037.1| 30S Ribosomal protein S4 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120034|gb|ABJ78077.1| 30S Ribosomal protein S4 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125785|gb|ABJ77056.1| 30S Ribosomal protein S4 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 207 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT----RSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ KI RR G +L+ + N R PG+ +RK K S +G QLR KQ Sbjct: 1 MARYRGPVVKIMRREGVDLFLKSSYTFNKDKFHRKGPPGMP-TKRKGKVSEYGTQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR+ ++EA S G T L+ LE RLD +VYR F T AR F+ Sbjct: 60 KLKRAYG-LLEKQFRNYYEEASHSHGVTGEILLQLLERRLDNVVYRLGFAVTRRQARNFI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174 HRHVLVNG V+I SYR GD +E+++K + + + +L++ + +P ++S ++ N Sbjct: 119 AHRHVLVNGERVDIPSYRLNVGDKVEIREKFRASTFIADNIRLSQSLQGIPSWLSADYTN 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + ++ ++VE YS+ Sbjct: 179 FGGDVTALPERHH---IDLPVKEQVIVELYSK 207 >gi|48527399|gb|AAT45832.1| small ribosomal protein 4 [Plagiochila patzschkei] Length = 202 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRXKIIRRLGSLPGLTSKTLKSKSNY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNIHSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|41323109|gb|AAR99784.1| small ribosomal protein 4 [Pedinophyllum interruptum] Length = 202 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K + S+ + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKILKSKSSF---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GDVI ++ K + + + + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDVITIRNKQQSQSIITKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWVNLKINELLVVEYYSR 200 >gi|48527389|gb|AAT45827.1| small ribosomal protein 4 [Plagiochila macrostachya] Length = 202 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + +R +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKKKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|118625999|emb|CAL41737.1| small ribosomal protein 4 [Lepidozia cupressina] Length = 203 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+G K+ +Y K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKVIRRLGAPPGLTSKTLKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + Sbjct: 117 ISINNNIVDIPSYNCEPGDIITIRDKQKSRSIIAKNVNLFQNLKIPSHLTFDSIKLCGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQTIHR---EWINLKINELLVVEYYSR 200 >gi|48527417|gb|AAT45841.1| small ribosomal protein 4 [Plagiochila sciophila] Length = 202 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD + R PTI ARQ VNH H Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVV++YSR Sbjct: 177 NQMIDR---EWINLKINELLVVKYYSR 200 >gi|86438880|emb|CAJ55410.1| small ribosomal protein 4 [Plagiochila circinalis] Length = 202 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIIAIRNKEKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|34500916|ref|NP_904101.1| ribosomal protein S4 [Amborella trichopoda] gi|52783274|sp|Q70Y01|RR4_AMBTC RecName: Full=30S ribosomal protein S4, chloroplastic gi|34481631|emb|CAD45109.1| ribosomal protein S4 [Amborella trichopoda] Length = 201 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK GD + ++K + A + + ++P+++++ Sbjct: 116 ILVNGRLVDIPSYRCKPGDFVTTREKERSRALIQNHMNSSPNEELPKHLTLYSLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|41323117|gb|AAR99788.1| small ribosomal protein 4 [Plagiochilion mayebarae] Length = 202 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNIDSFQKLKIPSHLTFDPTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LV E+YSR Sbjct: 177 NQMINR---EWIILKINELLVAEYYSR 200 >gi|166239974|gb|ABY86503.1| ribosomal protein S4 [Silene fruticosa] Length = 205 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 7/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K K K A +L + ++P++++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDKQKSRALILNYLDSSPPDELPKHLTLDPFPYKFPY 175 Query: 180 VRIPSSLKDV-PYPVIMQPNLVVEFYSR 206 + + + D + + LVVE+YSR Sbjct: 176 KGLINQIIDSKWVGLKINELLVVEYYSR 203 >gi|118625939|emb|CAL39291.1| small ribosomal protein 4 [Neesioscyphus argillaceus] Length = 202 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD I V+ + K + + + L +P +++ + + Sbjct: 117 ISINNDIVDIPSYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---ELINLKINELLVVEYYSR 200 >gi|26399184|sp|Q9M4B8|RR4_JAMAU RecName: Full=30S ribosomal protein S4, chloroplastic gi|8017423|emb|CAB92136.1| small ribosomal protein 4 [Syzygiella autumnalis] Length = 202 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + S+ + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTFKSKSSF---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRFDMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD I ++ K K + + + + L ++ +P +++ + + Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKIKIPSHLTFDSTQLRGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200 >gi|193237702|dbj|BAG50112.1| ribosomal protein S4 protein [Takakia lepidozioides] gi|193237719|dbj|BAG50128.1| ribosomal protein S4 protein [Takakia lepidozioides] Length = 202 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+G K+P + Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRVIRRLGALPGLTNKTPQSKSGY---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-VTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R+VNI S+RCK D I K + K A + + +++ ++P ++++N Sbjct: 117 ILVNDRTVNIPSFRCKPQDFITTKDRQKSQAVITKNMDCSQKSEMPNHLTLNSSQKRGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---ESIGLKINELLVVEYYSR 200 >gi|319760353|ref|YP_004124291.1| 30S ribosomal protein S4 [Candidatus Blochmannia vafer str. BVAF] gi|318039067|gb|ADV33617.1| 30S ribosomal protein S4 [Candidatus Blochmannia vafer str. BVAF] Length = 207 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR +L+ + ++++ + PG H RK++ S +G+QLR KQ Sbjct: 1 MAKYLGPKLKLSRRENTDLFLKSGIRSIDSKCRFEHSPGQH-NIRKARYSDYGMQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG I E++F + +K+A R +G+T L+ LESRLD +VYR F T +RQ V Sbjct: 60 KVKRIYG-ILERQFVNYYKKAARIKGNTGEILLQLLESRLDNVVYRMGFGSTRAESRQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174 +H+ V+VNGR VNI SY+ VI++ +SK + A ++AE R+ +I V+ Sbjct: 119 SHKSVVVNGRVVNIPSYQVMSDTVIQISTRSKHQTRIHAALEIAEQQRERVLWIEVDSIK 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R P + + +L+VE YS+ Sbjct: 179 LKGFFKRRPERSE---LSANIDEHLIVELYSK 207 >gi|152112240|sp|Q6YPY9|RS4_ONYPE RecName: Full=30S ribosomal protein S4 Length = 198 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S K+ RR+ ++ K + R+YGPG HGQ +K K S +GLQL+ KQK++ Sbjct: 1 MSRYTGSLWKVSRRLNYSVSETGKE-LRKRAYGPGQHGQ-KKLKLSDYGLQLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FR F A + +G + LESRLD +VYR F T ARQ NH H Sbjct: 59 TYG-VSEKQFRKTFDNASKLKGIHGEMFLVLLESRLDNVVYRLGFAKTRAQARQLANHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SYR K G + +++KSK L V EA ++ +Y+S++ + +V +V Sbjct: 118 ILVDGKKVDIASYRLKPGQTVTLREKSKNLNIVQEAVN-SKFVRADYVSLDKE-LVGKYV 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + +P + L+VE+Y+R Sbjct: 176 RYPQRNEFLP---DINEQLIVEYYNR 198 >gi|5163230|gb|AAD40609.1|AF115283_28 ribosomal protein S4 [Leptospira interrogans] Length = 207 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT----RSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ KI RR G +L+ + N R PG+ +RK K S +G QLR +Q Sbjct: 1 MARYRGPVVKIMRREGVDLFLKSSYTFNKDKFHRKGPPGMP-TKRKGKVSEYGAQLREEQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K+ YG + EK+FR ++EA + G T L+ LE RLD +VYR F T AR F+ Sbjct: 60 KLKRAYG-LLEKQFRRYYEEASHAHGVTGEILLQLLERRLDNVVYRLGFAITRRQARNFI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174 HRH+LVNG V+I SYR GD +E+++K K + + + +L++ + +P ++S ++ N Sbjct: 119 AHRHILVNGERVDIPSYRLNVGDKVEIREKFKTSSFIADNIKLSQSLQGIPSWLSADYTN 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + ++ ++VE YS+ Sbjct: 179 FGGDVTALPERHH---IDLPVKEQVIVELYSK 207 >gi|306486209|gb|ADM92746.1| ribosomal protein S4 [Franklinia alatamaha] Length = 198 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPRA-------GNDQSRSGKKSQYRIRLEEKQKLRF 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 54 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + + ++P+++++ Sbjct: 113 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNSLDSSPHEELPKHLTLYPFQYKGLV 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 173 NQIIDSK---WVGLKINELLVVEYYSR 196 >gi|328541080|gb|AEB21764.1| ribosomal protein S4 [Chiloscyphus semiteres] Length = 200 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ SY + K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H+ Sbjct: 58 G-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHGHIS 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + Sbjct: 117 INNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 MINR---EWINLKINELLVVEYYSR 198 >gi|157689476|gb|ABV65294.1| ribosomal protein S4 [Ficus sp. Moore 315] Length = 201 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKL----RAGSDLRNQLRPGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I V+ + K + V + R ++P++++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVRDEQKSKSLVQNYLDSSSREELPKHLTLHPFQYKGSV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---CVGLKINELLVVEYYSR 199 >gi|114804267|ref|YP_762263.1| ribosomal protein S4 [Morus indica] gi|122166803|sp|Q09X15|RR4_MORIN RecName: Full=30S ribosomal protein S4, chloroplastic gi|78100319|gb|ABB20960.1| ribosomal protein S4 [Morus indica] Length = 201 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKP----RAGSNLRNQLRPGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + K + V + R ++P++++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIIRVKDEQKSKSLVQNYLDSSSREELPKHLTLHPFQYKGSV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---CVGLKINELLVVEYYSR 199 >gi|270300639|gb|ACZ69398.1| ribosomal protein S4 [Ptilidium ciliare] Length = 202 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVCIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N +VNI SY CK GD+I ++ + K + + L ++ +P +++ + + + Sbjct: 117 ISINNDTVNIPSYNCKPGDMITIRNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 177 NQMIHR---EWIHLKINELLVVEYYSR 200 >gi|166092884|gb|ABY82400.1| ribosomal protein S4 [Eudianthe laeta] Length = 201 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLXMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D I K + K + + L+ ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIXAKDEQKSRTLIQKCIDLSPPEELPKHLTLDPFPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|328541082|gb|AEB21765.1| ribosomal protein S4 [Mastigophora woodsii] Length = 199 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ SY + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSISNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + +I Sbjct: 117 NNDIVDIPSYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLCGSINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWIHLKINELLVVEYYSR 197 >gi|114107048|ref|YP_740204.1| ribosomal protein S4 [Liriodendron tulipifera] gi|122221293|sp|Q0G9L7|RR4_LIRTU RecName: Full=30S ribosomal protein S4, chloroplastic gi|113200996|gb|ABI32511.1| ribosomal protein S4 [Liriodendron tulipifera] Length = 201 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + + A + + ++ ++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRGEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|54020253|ref|YP_116101.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 232] gi|71893926|ref|YP_279372.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae J] gi|72080904|ref|YP_287962.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 7448] gi|61215435|sp|Q5ZZW4|RS4_MYCH2 RecName: Full=30S ribosomal protein S4 gi|90101694|sp|Q4A7F0|RS4_MYCH7 RecName: Full=30S ribosomal protein S4 gi|90101695|sp|Q4A9B0|RS4_MYCHJ RecName: Full=30S ribosomal protein S4 gi|53987426|gb|AAV27627.1| 30s ribosomal protein S4 [Mycoplasma hyopneumoniae 232] gi|71852053|gb|AAZ44661.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae J] gi|71914028|gb|AAZ53939.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 7448] gi|312601523|gb|ADQ90778.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 168] Length = 205 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 116/210 (55%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ S + RR+G ++ K + R Y PGLHG R+SKPS +G+ LR KQK+ Sbjct: 1 MSRYTGSIFRKSRRLGFSILETGKEFAKGKQRRYAPGLHG-LRRSKPSDYGVHLREKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SEK+FR+ +++A + G + LESRLD VYRA F T ARQ VNH Sbjct: 60 RFMYG-LSEKQFRNTYRKATKKTGIAGTLFLQALESRLDNSVYRAGFAETRRQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVI--EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 H LVN + V+I S++ K+GD+ ++ K + + L R ++ V+ DN Sbjct: 119 GHFLVNNKKVDIPSFQLKQGDIFELTTRKDGKIRKNQQILTSLETRTPAAWLEVDKDNFK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + ++ +L+VEFYS+ Sbjct: 179 VVFNRMPERSE---LNQEIKESLIVEFYSK 205 >gi|118626089|emb|CAL39348.1| small ribosomal protein 4 [Cephaloziella varians] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD+I +K K K + + + ++ +P +++ + + + Sbjct: 117 ISVNSNLVDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLRQLQGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQKVNR---EWVNLKINELLVVEYYSR 200 >gi|89147828|gb|ABD62762.1| ribosomal protein 4 [Leiocolea heterocolpos] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ SY + K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVKIIRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ Sbjct: 60 G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHIS 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY C+ GD+I V+ K K + + + L ++ +P +++ + + + + Sbjct: 119 INNDIVDIPSYNCESGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSVNQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 179 TINR---EWINLKINELLVVEYYSR 200 >gi|118626007|emb|CAL39321.1| small ribosomal protein 4 [Leiomylia anomala] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKMLKSKSSY---VDRSISNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + L + +P ++S + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQNLKIPSHLSFDSTKLCGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQPINR---ESVNLKINELLVVEYYSR 200 >gi|48527407|gb|AAT45836.1| small ribosomal protein 4 [Plagiochila punctata] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNIYSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|15896356|ref|NP_349705.1| 30S ribosomal protein S4 [Clostridium acetobutylicum ATCC 824] gi|26399600|sp|Q97EK5|RS4A_CLOAB RecName: Full=30S ribosomal protein S4 A gi|15026171|gb|AAK81045.1|AE007807_3 Ribosomal protein S4 [Clostridium acetobutylicum ATCC 824] gi|325510512|gb|ADZ22148.1| 30S ribosomal protein S4 [Clostridium acetobutylicum EA 2018] Length = 206 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR G L+ + K R Y PG+HGQ RK K S +GLQLR Sbjct: 1 MARYTGAVCRLCRREGLKLFLKGDRCYTDKCAFTRRGYAPGVHGQSRK-KISNYGLQLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K+ YG + EK+FR +K A+R +G + NL+ LE RLD + Y+ + + ARQ Sbjct: 60 KQKAKRIYGVL-EKQFRIYYKRAERIKGISGENLLKLLELRLDNVAYKLGYGSSRKEARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H H LVNG+ V+I SY K +V+ V +KS+ ++ + +P +I N+DN Sbjct: 119 LVTHGHFLVNGKKVDIPSYTLKVNEVVSVSEKSRGTEKFKTFAENP-KTLPAWIEANYDN 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A V P+ ++ L+VE YS+ Sbjct: 178 FEAKIVAEPNR---EDIDTPIKETLIVELYSK 206 >gi|114107135|ref|YP_740119.1| ribosomal protein S4 [Daucus carota] gi|122221312|sp|Q0G9W0|RR4_DAUCA RecName: Full=30S ribosomal protein S4, chloroplastic gi|113200910|gb|ABI32426.1| ribosomal protein S4 [Daucus carota] Length = 201 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMATTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + A + + ++ ++P+++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSFNSPSQDEMPKHLTLQPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|159161255|ref|YP_001542533.1| ribosomal protein S4 [Cuscuta exaltata] gi|172048131|sp|A8W3C6|RR4_CUSEX RecName: Full=Plastid 30S ribosomal protein S4 gi|158938680|gb|ABW83697.1| ribosomal protein S4 [Cuscuta exaltata] Length = 201 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P R L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRTVR----DLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + A +++G T LI LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLINYVRIARKAKGSTGEILIQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VNG V+I SYRCK D+I K K K A + + + R ++P +++++ Sbjct: 116 IFVNGHIVDIPSYRCKPRDIITSKDKPKSGALIKNSIEAFPREELPNHLTLHPAPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 176 NQIIDTK---WVGLKINELLVVEYYSR 199 >gi|48527379|gb|AAT45822.1| small ribosomal protein 4 [Plagiochila hakkodensis] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGISPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 IAINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 SQMINR---EWINLKINELLVVEYYSR 200 >gi|41323129|gb|AAR99794.1| small ribosomal protein 4 [Plagiochila rutilans] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|41323133|gb|AAR99796.1| small ribosomal protein 4 [Plagiochila sandei] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R +G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRLLGALPGLTSKTLKSKSSY---IDRSTANKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD + R PT+ ARQ VNH H Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTVPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD I ++ + K + V + ++ +P +++ + + + Sbjct: 117 ISINNDMVDIPSYNCEPGDSITIRNEQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 177 NQMIDR---EWINLQINELLVVEYYSR 200 >gi|115391906|ref|YP_778494.1| ribosomal protein S4 [Jasminum nudiflorum] gi|122164969|sp|Q06RC7|RR4_JASNU RecName: Full=30S ribosomal protein S4, chloroplastic gi|110456227|gb|ABG74632.1| ribosomal protein S4 [Jasminum nudiflorum] Length = 203 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + + K RR+G KSP G L Q R K S + ++L KQK+ Sbjct: 1 MPRYLGPRFKKIRRLGALPGLTNKSP----KAGSDLRKQPRSRKKSQYRIRLEEKQKLCF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG + E + + + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LREYQLLNYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+ SYRCK D+I K K + + ++++P +++++ Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLGSSPQKELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|41323091|gb|AAR99775.1| small ribosomal protein 4 [Plagiochila britannica] Length = 202 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSYSD---RSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ITINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWTNLKINELLVVEYYSR 200 >gi|213419635|ref|ZP_03352701.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 184 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 74/186 (39%), Positives = 117/186 (62%), Gaps = 7/186 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIGQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178 Query: 176 VATFVR 181 T+ R Sbjct: 179 EGTYKR 184 >gi|166154841|ref|YP_001654959.1| 30S ribosomal protein S4 [Chlamydia trachomatis 434/Bu] gi|166155716|ref|YP_001653971.1| 30S ribosomal protein S4 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336122|ref|ZP_07224366.1| 30S ribosomal protein S4 [Chlamydia trachomatis L2tet1] gi|226697823|sp|B0B8K1|RS4_CHLT2 RecName: Full=30S ribosomal protein S4 gi|226697825|sp|B0BA80|RS4_CHLTB RecName: Full=30S ribosomal protein S4 gi|165930829|emb|CAP04327.1| SSU ribosomal protein S4P [Chlamydia trachomatis 434/Bu] gi|165931704|emb|CAP07281.1| SSU ribosomal protein S4P [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 209 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ +KE +G+ + + E RLD+IVYR F TIFAA+Q V+H H Sbjct: 60 CYGMILEKQLVKAYKEVVNKQGNVAQMFLEKFECRLDSIVYRLGFAKTIFAAQQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G I +K+KSK+LA V E+ + + +P Y+S++ Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179 Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205 V P + P+ + +++ EF S Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206 >gi|157689474|gb|ABV65293.1| ribosomal protein S4 [Euonymus americanus] Length = 201 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRP----RVGNDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R T+ ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTVPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + K A + +VP++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSFPHEEVPKHLTLHPIQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + L+VE+YSR Sbjct: 176 NQIIDSK---SIGLKINELLIVEYYSR 199 >gi|86438908|emb|CAJ55415.1| small ribosomal protein 4 [Plagiochila validissima] Length = 202 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVV++YSR Sbjct: 177 NQMINR---EWINLKINELLVVQYYSR 200 >gi|328541040|gb|AEB21744.1| ribosomal protein S4 [Kurzia dendroides] Length = 202 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K Y K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T + LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQSLKYVRIARKAKGSTGQVSLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +KQK K + + + L + +P +++ + + + Sbjct: 117 IPINNNIVDIPSYNCEPGDIITIKQKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTINR---ESIDLKINELLVVEYYSR 200 >gi|41323097|gb|AAR99778.1| small ribosomal protein 4 [Plagiochila cristata] Length = 202 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++ PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFSLGLSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIVNKQKSRSIVTKNINSFQKSKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 177 NQIINR---EWINLKINELLVVEYYSR 200 >gi|15605357|ref|NP_220143.1| 30S ribosomal protein S4 [Chlamydia trachomatis D/UW-3/CX] gi|76789365|ref|YP_328451.1| 30S ribosomal protein S4 [Chlamydia trachomatis A/HAR-13] gi|237803055|ref|YP_002888249.1| 30S ribosomal protein S4 [Chlamydia trachomatis B/Jali20/OT] gi|237804976|ref|YP_002889130.1| 30S ribosomal protein S4 [Chlamydia trachomatis B/TZ1A828/OT] gi|7388192|sp|O84631|RS4_CHLTR RecName: Full=30S ribosomal protein S4 gi|90101682|sp|Q3KL69|RS4_CHLTA RecName: Full=30S ribosomal protein S4 gi|3329073|gb|AAC68230.1| S4 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|76167895|gb|AAX50903.1| SSU ribosomal protein S4P [Chlamydia trachomatis A/HAR-13] gi|231273276|emb|CAX10191.1| SSU ribosomal protein S4P [Chlamydia trachomatis B/TZ1A828/OT] gi|231274289|emb|CAX11084.1| SSU ribosomal protein S4P [Chlamydia trachomatis B/Jali20/OT] gi|296437091|gb|ADH19261.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/11222] gi|297748756|gb|ADI51302.1| SSU ribosomal protein S4P [Chlamydia trachomatis D-EC] gi|297749636|gb|ADI52314.1| SSU ribosomal protein S4P [Chlamydia trachomatis D-LC] Length = 209 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ +KE +G+ + + E RLD IVYR F TIFAA+Q V+H H Sbjct: 60 CYGMILEKQLVKAYKEVVNKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G I +K+KSK+LA V E+ + + +P Y+S++ Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179 Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205 V P + P+ + +++ EF S Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206 >gi|295311734|ref|YP_003587470.1| ribosomal protein S4 [Oncidium Gower Ramsey] gi|254833111|gb|ACT83114.1| ribosomal protein S4 [Oncidium Gower Ramsey] Length = 201 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + LH K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKIPRSRSDLQTQLH----SGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + R ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKARDIITTKDKERSKALIQNYLVSSPRGELPNHLTIDSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|110005221|emb|CAK99547.1| probable 30s ribosomal protein s4 [Spiroplasma citri] Length = 204 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ S K RR G ++ K S R+ PG HGQRR +Y GLQL KQK+ Sbjct: 1 MARYRGSIFKKARRYGFSILENDKEFSKGKKRTTPPGQHGQRRSKLSNY-GLQLHEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG ++E++FR+ + ++ + +G N + LESRLD IV+R T ARQ VNH Sbjct: 60 CYMYG-LTERQFRNTYSKSKKMKGIAGTNFLIMLESRLDNIVHRMGLSQTRAGARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+LVNG+ V+I SY CK GDVI VK+ ++ +LE+ + E++ + M T Sbjct: 119 AHILVNGKKVDIPSYNCKPGDVISVKESLQKNVKILESLDSQVSTL-EFVKFDKTKMTGT 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VR P + + L+VE+Y+R Sbjct: 178 YVRFPLREE---LNSNINEALIVEWYNR 202 >gi|26399186|sp|Q9M4B9|RR4_DIPFO RecName: Full=30S ribosomal protein S4, chloroplastic gi|8017364|emb|CAB92129.1| small ribosomal protein 4 [Diphyscium foliosum] Length = 202 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTSKTPQLKSNS---INQSASNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R VNI SYRCK D I +K++ K +++ L+++ +P +++ N Sbjct: 117 ILVNDRIVNIPSYRCKPQDFITIKERQKSQGIIVKNMDLSQKYKIPNHLTFNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|157689482|gb|ABV65297.1| ribosomal protein S4 [Gunnera manicata] Length = 201 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSVKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEEKSRALIQNFLDSSTHAELPKHLTRHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199 >gi|41323113|gb|AAR99786.1| small ribosomal protein 4 [Plagiochila gymnocalycina] Length = 202 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLVKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +K K K + V + ++ +P +++ N + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|41323099|gb|AAR99779.1| small ribosomal protein 4 [Plagiochila cucullifolia var. anomala] Length = 202 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSALNKKVFQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + ++R +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSSQRLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|48527427|gb|AAT45846.1| small ribosomal protein 4 [Plagiochila turgida] Length = 202 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSALNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQALLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + +R +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|255311449|ref|ZP_05354019.1| 30S ribosomal protein S4 [Chlamydia trachomatis 6276] gi|255317750|ref|ZP_05358996.1| 30S ribosomal protein S4 [Chlamydia trachomatis 6276s] gi|296436163|gb|ADH18337.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/9768] gi|296438023|gb|ADH20184.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/11074] gi|297140525|gb|ADH97283.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/9301] Length = 209 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ ++E +G+ + + E RLD IVYR F TIFAA+Q V+H H Sbjct: 60 CYGMILEKQLVKAYEEVVNKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G I +K+KSK+LA V E+ + + +P Y+S++ Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179 Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205 V P + P+ + +++ EF S Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206 >gi|229915555|gb|ACQ90899.1| ribosomal protein S4 [Pedinomonas minor] Length = 199 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I RR+GE L G + P+ TR PG HG K Y G++L KQK++ Sbjct: 1 MARYSGPRLRIIRRLGE-LPGLTRKPL-TRLNPPGQHGANTKKNSQY-GIRLLEKQKLRY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE + K+A R++G T L+ LE RLD +YR F PTI AARQ V+H H Sbjct: 58 NYA-ISETQLIRYVKQARRAKGSTGEILLQNLEMRLDNTIYRLGFAPTILAARQMVSHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVN V I SY C+ D + V+ K + V + A +P ++++N D + A Sbjct: 117 ILVNNVRVTIPSYPCQPKDTVAVRNKPQSKKLVTNSLTSA--VIPGHLNLNKDALTAVIQ 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + P + L+VEFYSR Sbjct: 175 Q---TASRTSVPFEVNELLIVEFYSR 197 >gi|258651411|ref|YP_003200567.1| 30S ribosomal protein S4 [Nakamurella multipartita DSM 44233] gi|258554636|gb|ACV77578.1| ribosomal protein S4 [Nakamurella multipartita DSM 44233] Length = 201 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G R + PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPITKKSRRLKTDLVG-GDMAFERRPFPPGQHGRARTKEKEYL-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA G T L+ LESRLD +VYRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYAEAASRTGKTGDTLLQILESRLDNVVYRAGLARTRRHARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 VNG V++ SYR ++ D+I V+++S + A + ER P ++ V + + Sbjct: 118 FEVNGVRVDVPSYRVEQYDLITVRKQSTESFPFELARATFGERTPPAWMKVVPETLQIII 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + + L+VEFYS+ Sbjct: 178 HSLPVRAQ---IDSQITEQLIVEFYSK 201 >gi|187251795|ref|YP_001876277.1| RNA-binding S4 domain-containing protein [Elusimicrobium minutum Pei191] gi|226699062|sp|B2KEJ4|RS4_ELUMP RecName: Full=30S ribosomal protein S4 gi|186971955|gb|ACC98940.1| RNA-binding S4 domain protein [Elusimicrobium minutum Pei191] Length = 201 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 102/206 (49%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE ++G KS + + RK K S FG QL KQK K Sbjct: 1 MARYIGPKTKIARKFGEPIFGPDKSLIKSERAAGNNKHAPRKKKMSVFGTQLAEKQKAKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++F +A G T L+ LE RLD IVYR T AARQ V HRH Sbjct: 61 TYG-LLEKQFSNLFTKAHSLPGVTGEVLMQLLECRLDNIVYRMGLARTRAAARQLVTHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + V+G V SY K G VI V + SK L+ + + +I + + A +V Sbjct: 120 ITVDGEIVKTPSYSVKPGQVISVTEGSKSLSMFEVNLKGYDHAKYSWIEW-KEPVSAKYV 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP + P + L+VE YS+ Sbjct: 179 RIPERAE---IPENINEQLIVEHYSK 201 >gi|48527421|gb|AAT45843.1| small ribosomal protein 4 [Plagiochila subtropica] Length = 202 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIIIIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---ELIDLKINELLVVEYYSR 200 >gi|78778790|ref|YP_396902.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9312] gi|90101704|sp|Q31CC9|RS4_PROM9 RecName: Full=30S ribosomal protein S4 gi|78712289|gb|ABB49466.1| SSU ribosomal protein S4P [Prochlorococcus marinus str. MIT 9312] Length = 202 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+ +S PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ K+A G T NL+ LE+RLD + +R F TI +RQ VNH H Sbjct: 58 NYG-VSEKQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ ++I Y+CK GDVI +K+ V + +VP ++ ++ + Sbjct: 117 VTVNGKVLDIAGYQCKSGDVIGIKENKASKKLVEGNIEFPGLANVPPHLDLDKPKLTGKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 TGKCDR---EWVALEINELLVVEYYSR 200 >gi|304372886|ref|YP_003856095.1| 30S ribosomal protein S4 [Mycoplasma hyorhinis HUB-1] gi|304309077|gb|ADM21557.1| 30S ribosomal protein S4 [Mycoplasma hyorhinis HUB-1] gi|330723530|gb|AEC45900.1| 30S ribosomal protein S4 [Mycoplasma hyorhinis MCLD] Length = 205 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 110/210 (52%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ K RR G ++ K R Y PG HGQ RK+K S +GL L KQK+ Sbjct: 1 MSRYTGPVFKKSRRYGFSILETGKEFVKGKQRKYAPGQHGQ-RKTKLSDYGLHLYEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG I+E++FR+ FK+A + G + LESRLD IVYRA F T ARQ VNH Sbjct: 60 RFMYG-INERQFRNTFKKATKKHGVAGTVFLQTLESRLDNIVYRAGFAETRRQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVI--EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 H L+NG+ NI S GD I K++ K +V L + E+I + D Sbjct: 119 GHFLLNGKKANIPSMILSVGDTIELTTKKEGKIRKNVQILEALEKNRTAEWIKLEKDKFK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ATF R+P + ++ +L+VEFYS+ Sbjct: 179 ATFERLPERKE---LNPEIKESLIVEFYSK 205 >gi|183221323|ref|YP_001839319.1| 30S ribosomal protein S4 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911414|ref|YP_001962969.1| 30S ribosomal protein S4 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226699081|sp|B0SA21|RS4_LEPBA RecName: Full=30S ribosomal protein S4 gi|226699082|sp|B0SSF3|RS4_LEPBP RecName: Full=30S ribosomal protein S4 gi|167776090|gb|ABZ94391.1| 30S Ribosomal protein S4 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779745|gb|ABZ98043.1| 30S ribosomal protein S4 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 210 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 120/215 (55%), Gaps = 14/215 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K+ RR G NL+ + KS + R Y PGL ++K K + +G QLR Sbjct: 1 MARYRGPVVKLMRREGLNLFLKNSHTLHKEKSSLEKRKYPPGLP-PKKKGKITEYGAQLR 59 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + EK+FR F+EA + G NL+ FLE RLD ++YR F T AR Sbjct: 60 EKQKVKRAYGVL-EKQFRRYFEEASHTPGIPGENLLQFLERRLDNVLYRMGFAVTRRQAR 118 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVN 171 FV HRH+LVNG V+I SYR GD IE+++K ++ A + E +LA+ ++SV+ Sbjct: 119 NFVAHRHILVNGHRVDICSYRVNIGDKIEIREKFQKSAFIEENIKLAQAINRTASWVSVD 178 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+ + ++ ++VE YS+ Sbjct: 179 YAKFSGEVLSLPTRDH---IDIPVKEQVIVELYSK 210 >gi|123967997|ref|YP_001008855.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. AS9601] gi|126695767|ref|YP_001090653.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9301] gi|157412822|ref|YP_001483688.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9215] gi|152112244|sp|A3PBC7|RS4_PROM0 RecName: Full=30S ribosomal protein S4 gi|152112248|sp|A2BPN7|RS4_PROMS RecName: Full=30S ribosomal protein S4 gi|172047276|sp|A8G3C1|RS4_PROM2 RecName: Full=30S ribosomal protein S4 gi|91070325|gb|ABE11242.1| 30S ribosomal protein S4 [uncultured Prochlorococcus marinus clone HF10-88F10] gi|123198107|gb|ABM69748.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. AS9601] gi|126542810|gb|ABO17052.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9301] gi|157387397|gb|ABV50102.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9215] Length = 202 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+ +S PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ K+A G T NL+ LE+RLD + +R F TI +RQ VNH H Sbjct: 58 NYG-VSEKQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ ++I Y+CK GDVI +K+ V + +VP ++ ++ + Sbjct: 117 VTVNGKVLDIAGYQCKSGDVIGIKENKASKKLVEGNIEFPGLANVPPHLDLDKPKLTGKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 NGKCDR---EWVALEINELLVVEYYSR 200 >gi|48527375|gb|AAT45820.1| small ribosomal protein 4 [Plagiochila flexuosa] Length = 202 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKLKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMCIARKAKGSTGEVLLQLLEMRSDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDMVNIPSYNCESGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWITLKINELLVVEYYSR 200 >gi|15828060|ref|NP_302323.1| 30S ribosomal protein S4 [Mycobacterium leprae TN] gi|221230537|ref|YP_002503953.1| 30S ribosomal protein S4 [Mycobacterium leprae Br4923] gi|7388198|sp|Q9X799|RS4_MYCLE RecName: Full=30S ribosomal protein S4 gi|254764601|sp|B8ZSH7|RS4_MYCLB RecName: Full=30S ribosomal protein S4 gi|4539113|emb|CAB39834.1| putative 30S ribosomal protein S4 [Mycobacterium leprae] gi|13093613|emb|CAC30913.1| 30S ribosomal protein S4 [Mycobacterium leprae] gi|219933644|emb|CAR72055.1| 30S ribosomal protein S4 [Mycobacterium leprae Br4923] Length = 201 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPITRKSRRLRIDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD ++YRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VNG VN+ SYR + D+I+++ KS A + +R +P ++ V ++ Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDIRDKSLDTVPFQIARETVGDRPIPSWLQVVGEHQRILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P ++ + P+I L+VE+YS+ Sbjct: 178 HQLPERVQ-IEVPLI--EQLIVEYYSK 201 >gi|33860967|ref|NP_892528.1| 30S ribosomal protein S4 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|41017826|sp|Q7V2R1|RS4_PROMP RecName: Full=30S ribosomal protein S4 gi|33639699|emb|CAE18869.1| 30S ribosomal protein S4 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 202 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+ +S PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F TI +RQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V +NG+ ++I Y+CK GDVI +K+ V + +VP +I ++ + Sbjct: 117 VTINGKVLDIAGYQCKPGDVISIKENKASKKLVEGNIEFPGLANVPPHIELDKPKLTGKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 N---GKCDREWVALEINELLVVEYYSR 200 >gi|242620095|ref|YP_003002099.1| 30S ribosomal protein S4 [Aureococcus anophagefferens] gi|239997340|gb|ACS36863.1| 30S ribosomal protein S4 [Aureococcus anophagefferens] Length = 204 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 9/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ K +I RR+GE K+ TR PG H + R ++ S + ++L+ KQK+ Sbjct: 1 MSRYRGPKIRIVRRLGELPGLTAKTT--TRETLPGQHKKVRGKQNNISSYSIRLQEKQKL 58 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ++EK+ S KEA R +G T LI LE RLD IVYR TI A+RQ VNH Sbjct: 59 RYNYG-LTEKQLFSYVKEARRLKGSTGSVLIQLLEMRLDNIVYRLGIGNTIPASRQIVNH 117 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 H+ VNG+ V I S++C DVIEV+ + + + VP+Y+ DN+ Sbjct: 118 GHIYVNGKKVTIPSFQCSPNDVIEVRNRVTSKELAKQYLEKPSYNTVPQYLEFEKDNLKG 177 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ ++ + + L+VE+YSR Sbjct: 178 KVKRV---AENTETNLNINELLIVEYYSR 203 >gi|295065730|ref|YP_003587670.1| ribosomal protein S4 [Anomochloa marantoidea] gi|251765254|gb|ACT15408.1| ribosomal protein S4 [Anomochloa marantoidea] Length = 201 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P + + L Q + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTPKSRSN----LQNQLQSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + + + ++R +P +++++ Sbjct: 116 ILVNGRIVDIPSFRCKPQDIITTKDNQRSKRLIQNSIASSDRMQLPNHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 176 KKIIARK---WIGLKINELLVVEYYSR 199 >gi|48527405|gb|AAT45835.1| small ribosomal protein 4 [Plagiochila porelloides] Length = 202 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCELGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|115605024|ref|YP_784475.1| ribosomal protein S4 [Piper cenocladum] gi|122164360|sp|Q06GQ8|RR4_PIPCE RecName: Full=30S ribosomal protein S4, chloroplastic gi|112253753|gb|ABI14474.1| ribosomal protein S4 [Piper cenocladum] Length = 201 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + S L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLIRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSSTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I + + + V + A R ++P++++++ Sbjct: 116 VLVNGRIVDIPSYRCKPRDIISTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---GVGLKINELLVVEYYSR 199 >gi|15618643|ref|NP_224929.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae CWL029] gi|15836265|ref|NP_300789.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae J138] gi|16752308|ref|NP_444565.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae AR39] gi|33242092|ref|NP_877033.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae TW-183] gi|7388204|sp|Q9Z7H2|RS4_CHLPN RecName: Full=30S ribosomal protein S4 gi|4377038|gb|AAD18872.1| S4 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|7188952|gb|AAF37909.1| ribosomal protein S4 [Chlamydophila pneumoniae AR39] gi|8979105|dbj|BAA98940.1| S4 ribosomal protein [Chlamydophila pneumoniae J138] gi|33236602|gb|AAP98690.1| ribosomal protein S4 [Chlamydophila pneumoniae TW-183] gi|269302522|gb|ACZ32622.1| ribosomal protein S4 [Chlamydophila pneumoniae LPCoLN] Length = 209 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K+++ RR G N++GR ++P+ + + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRVARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ FKE +G+ + + E RLD +VYR F TIFAA+Q V H H Sbjct: 60 CYGMIMEKQLVKAFKEVIHKQGNVAQMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+ S+ + G I +K+KSK+L SV +A + E +P YIS++ Sbjct: 120 ILVNGRRVDRRSFFLRPGMQISLKEKSKRLQSVKDALESKDESSLPSYISLDKTGFKGEL 179 Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205 + P + + P+ + ++V EF S Sbjct: 180 LVSPEQDQIEAQLPLPINISVVCEFLS 206 >gi|41323139|gb|AAR99799.1| small ribosomal protein 4 [Plagiochila tabinensis] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGXLPGLTSKTLESKSNY---MDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ +E RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLIEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P ++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|41323111|gb|AAR99785.1| small ribosomal protein 4 [Plagiochila fruticosa] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IERSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMCIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LV+E+YSR Sbjct: 177 NQMINR---EWLNLQINELLVLEYYSR 200 >gi|48527365|gb|AAT45815.1| small ribosomal protein 4 [Plagiochila deflexirama] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQILLQLLEMRSDNTIFRLSMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ILINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|6002083|emb|CAA58951.1| ribosomal protein S4 [Smilax aspera] Length = 196 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----KSGSDLKNQLRSRKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + + A + + + R ++P++++++ Sbjct: 116 ILVNGRVVDIPSYRCKPQDIITPKDEQRSKALIQNSIASSPREELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|48527425|gb|AAT45845.1| small ribosomal protein 4 [Plagiochila trichostoma] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R +G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRXKIIRCLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ N + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|296394891|ref|YP_003659775.1| 30S ribosomal protein S4 [Segniliparus rotundus DSM 44985] gi|296182038|gb|ADG98944.1| ribosomal protein S4 [Segniliparus rotundus DSM 44985] Length = 201 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G K RSY PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPITRRSRRLRVDLVGGDK-AFERRSYPPGQHGRSRIKESEYL-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++F++ ++EA R G T NL+ LE+RLD ++YRA T ARQ V H H Sbjct: 59 TYG-VMERQFQNYYREAHRRPGKTGENLLRILETRLDNVIYRAGLARTRRHARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVN + V++ SYR + D+I+V+++S A + +R VP ++ V ++ Sbjct: 118 FLVNQKRVDVPSYRVSQYDIIDVREQSAHADPFEIAREYYGDRPVPGWLQVVEGSLRIFV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + V +Q L+VEFYS+ Sbjct: 178 HAEPVREQ---IDVPLQEQLIVEFYSK 201 >gi|41323095|gb|AAR99777.1| small ribosomal protein 4 [Plagiochila carringtonii] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G ++ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSRTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGISPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|328541088|gb|AEB21768.1| ribosomal protein S4 [Zoopsis setulosa] Length = 199 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ +Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGTLPGLTSKTAKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHGHIAI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + +++ L + +P +++ + + + + Sbjct: 117 NYNIVDIPSYNCEPGDIITIRDKQKSQSVIIKNINLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|290487076|gb|ADD29922.1| ribosomal protein S4 [Nerium oleander] Length = 201 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I VK + K A + ++ + ++P ++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQKSKALIQKSLDSSPHEELPSHLILQPFQYNGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|293977953|ref|YP_003543383.1| 30S ribosomal protein S4P [Candidatus Sulcia muelleri DMIN] gi|292667884|gb|ADE35519.1| SSU ribosomal protein S4P [Candidatus Sulcia muelleri DMIN] Length = 196 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 14/208 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQKM 58 M++ K KI R+ GE ++G + Y PG H R K +++ QL KQK+ Sbjct: 1 MARYIGPKTKISRKFGELIYGNTNKSFEKKKYPPGQHANSSSRNIKKTFYSTQLLEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I E++F +F +A + +G L+ ESRLD IVYR + ARQ V+H Sbjct: 61 KYTYG-ILERQFLKMFYKASKKKGIKGEILLQLCESRLDNIVYRLNLSHSRPEARQLVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 RH+ VNG+ VNI S+ K GD I +K+K K + L S +++S +++ M+ Sbjct: 120 RHITVNGKIVNIPSFNLKPGDKISLKEKHKANKNKLLGS--------DWLSWDNEKMIGI 171 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F IP+ + + L+VE YS+ Sbjct: 172 FKYIPNRNQ---ITENINEKLIVELYSK 196 >gi|48527369|gb|AAT45817.1| small ribosomal protein 4 [Plagiochila dura] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI+RR G K+ + SY + K S + ++L QK++ Sbjct: 1 MSRYRGPRVKINRRXGSLPGLTSKALKSKSSY---IDRSTSNKKISQYRIRLEENQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYSCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|152965078|ref|YP_001360862.1| ribosomal protein S4 [Kineococcus radiotolerans SRS30216] gi|151359595|gb|ABS02598.1| ribosomal protein S4 [Kineococcus radiotolerans SRS30216] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 7/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K +I R +G L + ++ R Y PG+HG+++K K S + QLR KQ+++ Y +S Sbjct: 6 PKVRISRALGVALTPKAARFMDRRPYPPGMHGRKQK-KASDYATQLREKQRLRFQYD-VS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R + A R G T NL+ LE+RLD +V+RA F TI+ ARQ V HRH++V+GR Sbjct: 64 ETQLRRAYDLAKRKPGKTGQNLVQLLETRLDAVVWRAGFARTIYQARQMVVHRHIVVDGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPS 184 V+ S+R G IEV +SK + A + ++ ++P +++V +++ AT +P Sbjct: 124 RVDRPSFRVVVGQTIEVAPRSKTKTPFIVAREGGWSDNEIPGWLAVEREDLTATVNALPV 183 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV LVVE+YSR Sbjct: 184 REQ---IPVTCDEQLVVEYYSR 202 >gi|48527415|gb|AAT45840.1| small ribosomal protein 4 [Plagiochila satoi] Length = 202 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCELGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|62184658|ref|YP_219443.1| 30S ribosomal protein S4 [Chlamydophila abortus S26/3] gi|81313156|sp|Q5L799|RS4_CHLAB RecName: Full=30S ribosomal protein S4 gi|62147725|emb|CAH63469.1| putative 30s ribosomal protein s4 [Chlamydophila abortus S26/3] Length = 209 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRSRNPLFKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ FKE +G + + E RLD +VYR F TIFAA+Q V H H Sbjct: 60 CYGMILEKQLVKAFKEVVNKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G + +++KS++L SV E+ + E P YISV+ N Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLREKSRKLQSVKESLENKDESSFPSYISVDKSNFKGEL 179 Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205 + P + + P+ + ++V EF S Sbjct: 180 LISPEQDQIEAQLPLPVDVSVVCEFLS 206 >gi|290487070|gb|ADD29919.1| ribosomal protein S4 [Lonicera japonica] Length = 197 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 17/209 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P+ GQ R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTKKGPI----------GQSRSVKKSQYRIRLEEKQKLRF 50 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 51 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 109 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 +LVNGR V+I SYRCK D+I + + A + + + + +P+++++ Sbjct: 110 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSLNSSPHKKNKLPKHLTLQPFQYKG 169 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 170 LVNQIIDSK---WVGLKINELLVVEYYSR 195 >gi|77862557|gb|ABB04551.1| small ribosomal protein 4 [Ricciocarpos natans] Length = 202 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N +V+I SY CK DVI +K + K + + + ++ +P +++ + + Sbjct: 117 ILINNSTVDIPSYNCKPKDVITIKDRPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWIFLKINELLVVEYYSR 200 >gi|48527403|gb|AAT45834.1| small ribosomal protein 4 [Plagiochila poeltii] Length = 202 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G ++ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSRTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGISPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|255349010|ref|ZP_05381017.1| 30S ribosomal protein S4 [Chlamydia trachomatis 70] gi|255503549|ref|ZP_05381939.1| 30S ribosomal protein S4 [Chlamydia trachomatis 70s] Length = 209 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ +KE + + + + E RLD IVYR F TIFAA+Q V+H H Sbjct: 60 CYGMILEKQLVKAYKEVINKQRNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G I +K+KSK+LA V E+ + + +P Y+S++ Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179 Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205 V P + P+ + +++ EF S Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206 >gi|329942329|ref|ZP_08291139.1| ribosomal protein S4 [Chlamydophila psittaci Cal10] gi|313847567|emb|CBY16555.1| putative 30s ribosomal protein s4 [Chlamydophila psittaci RD1] gi|325507112|gb|ADZ18750.1| 30S ribosomal protein S4 [Chlamydophila psittaci 6BC] gi|328815239|gb|EGF85227.1| ribosomal protein S4 [Chlamydophila psittaci Cal10] gi|328914200|gb|AEB55033.1| ribosomal protein S4 [Chlamydophila psittaci 6BC] Length = 209 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 119/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ FKE +G + + E RLD +VYR F TIFAA+Q V H H Sbjct: 60 CYGMILEKQLVKAFKEVVNKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G + +K+KS++L SV E+ + E P YISV+ N Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLKEKSRKLQSVKESLENKDESSFPSYISVDKSNFKGEL 179 Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205 + P + + P+ + ++V EF S Sbjct: 180 LVSPEQDQIEAQLPLPVDVSVVCEFLS 206 >gi|11466704|ref|NP_039300.1| ribosomal protein S4 [Marchantia polymorpha] gi|133956|sp|P06358|RR4_MARPO RecName: Full=30S ribosomal protein S4, chloroplastic gi|11674|emb|CAA28086.1| rps4 [Marchantia polymorpha] gi|222103416|gb|ACM44237.1| small ribosomal protein subunit 4 [Marchantia polymorpha] Length = 202 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKLKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N +V+I SY CK DVI +K +SK + +++ ++ +P +++ + + Sbjct: 117 ILINNNTVDIPSYNCKPKDVITIKDRSKSQSIIIKNLNSFQKQKIPNHLTFDLMQIKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWIYLKINELLVVEYYSR 200 >gi|225544126|ref|YP_002720114.1| rps4 [Jatropha curcas] gi|224979567|gb|ACN72694.1| rps4 [Jatropha curcas] Length = 201 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGIASTIPRARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK DVI V+ + K A + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDVITVRDEQKSRAMIPNYLDSSPQEELPKHLTLHPIQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WGGLKINELLVVEYYSR 199 >gi|118626045|emb|CAL41747.1| small ribosomal protein 4 [Jungermannia caespiticia] Length = 203 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRIKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD I VK K K + + L ++ +P +++ N + + Sbjct: 117 ISVNNDIVDIPSYNCELGDFITVKNKQKSQLIITKNVNLFQKLKIPTHLTFNSIELRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQTITR---ESVNLKINELLVVEYYSR 200 >gi|41323101|gb|AAR99780.1| small ribosomal protein 4 [Chiastocaulon dendroides] gi|41323103|gb|AAR99781.1| small ribosomal protein 4 [Chiastocaulon dendroides] Length = 202 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKILKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLVKYMRIARKAKGSTGQLLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|124112120|ref|YP_001019095.1| ribosomal protein S4 [Chlorokybus atmophyticus] gi|152060548|sp|Q19VA6|RR4_CHLAT RecName: Full=30S ribosomal protein S4, chloroplastic gi|124012227|gb|ABD62252.2| ribosomal protein S4 [Chlorokybus atmophyticus] Length = 203 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 5/206 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G +L G ++ + K + S + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKIVRRLG-DLPGFTNKIQKRQASTQNKGKKTAKKRLSQYSIRLQEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ ++A R +G T L+ LE RLD I+YR PTI ARQ VNH H Sbjct: 60 NYG-VTERQLLLYVRKARRIKGSTGQILLQQLEMRLDNIIYRLGMAPTIANARQLVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++VN R V I SYRCK D+I V+ S + ++ +P ++S +++VA Sbjct: 119 IVVNDRIVTIPSYRCKPKDIISVRNNSTSRNVITNNLSFSDSRLPPHLSFKKESLVALVN 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + LVVE+YSR Sbjct: 179 GLVDRQ---WIPLNINELLVVEYYSR 201 >gi|121761863|gb|ABM65017.1| ribosomal protein S4 [Plagiomnium cf. tezukae Wyatt 1808] Length = 202 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE+RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLETRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D I +K + K + + ++ +P++++ N N Sbjct: 117 ILVNDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPDHLTYNSLNKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQILDRD---SIDLKINELLVVEYYSR 200 >gi|89898802|ref|YP_515912.1| 30S ribosomal protein S4 [Chlamydophila felis Fe/C-56] gi|123482660|sp|Q252M1|RS4_CHLFF RecName: Full=30S ribosomal protein S4 gi|89332174|dbj|BAE81767.1| 30S ribosomal protein S4 [Chlamydophila felis Fe/C-56] Length = 209 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ FKE +G + + E RLD +VYR F TIFAA+Q V H H Sbjct: 60 CYGMILEKQLVKAFKEVVHKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G + +K+KS++L SV E+ + E +P YIS++ N Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLKEKSRKLQSVQESLENKDESSLPSYISLDKGNFKGEL 179 Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205 + P + + P+ + ++V EF S Sbjct: 180 LMSPEQDQMEAQLPLPVDISVVCEFLS 206 >gi|15835528|ref|NP_297287.1| 30S ribosomal protein S4 [Chlamydia muridarum Nigg] gi|270285715|ref|ZP_06195109.1| 30S ribosomal protein S4 [Chlamydia muridarum Nigg] gi|301337109|ref|ZP_07225311.1| 30S ribosomal protein S4 [Chlamydia muridarum MopnTet14] gi|13633873|sp|Q9PJB7|RS4_CHLMU RecName: Full=30S ribosomal protein S4 gi|7190943|gb|AAF39707.1| ribosomal protein S4 [Chlamydia muridarum Nigg] Length = 209 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ +KE +G+ + + E RLD IVYR F TIFAA+Q V+H H Sbjct: 60 CYGMILEKQLVKAYKEVVHKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G I +K+KS++LA V E+ + + +P Y+S++ Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSRRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179 Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205 V P + P+ + +++ EF S Sbjct: 180 VVSPELDQISSQLPLPVNVSVICEFLS 206 >gi|91200693|emb|CAJ73744.1| strongly similar to 30S ribosomal protein S4 [Candidatus Kuenenia stuttgartiensis] Length = 208 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR GE L+ + K + R Y PG R Y G+Q R Sbjct: 1 MARYVGPQCRLCRREGEKLFLKGFRCETAKCAITKRKYPPGQFSWGRGKLSKY-GIQFRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K++YG + E++FR+ F++A++ +G+T NL+ LE RLD +V+ F + +ARQ Sbjct: 60 KQKVKRFYGVL-ERQFRNYFRKAEKQKGNTGDNLLVMLERRLDNVVHLLTFAHSRKSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173 + H +V VN + V+I S+ K GDVI K + V + ++ L R + ++ Sbjct: 119 LILHGNVTVNDKKVDIASFLVKVGDVIRPKNSERSRKLVQDNAEALKSRKISSWLEFRQG 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P+ V +Q L++E S+ Sbjct: 179 ALEGVVTQLPNRDD---ISVSVQEQLIIELCSK 208 >gi|256825859|ref|YP_003149819.1| 30S ribosomal protein S4 [Kytococcus sedentarius DSM 20547] gi|256689252|gb|ACV07054.1| SSU ribosomal protein S4P [Kytococcus sedentarius DSM 20547] Length = 202 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G KS + R Y PG+HG+RR + Y QL+ KQK + Sbjct: 1 MARYTGPITKKSRRLKVDLVGSDKS-FDARPYPPGMHGRRRTQEKEYLA-QLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + EA R G T NL++ LESRLD ++YRA PT AARQ V H H Sbjct: 59 MYG-VMEKQFRRYYAEAARRPGKTGDNLLTILESRLDNVIYRAGIAPTRRAARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 L+NG+ V++ S + + D+I+V+ KS + A + ER VP ++ V ++ Sbjct: 118 FLLNGQRVDVPSIQVSKFDIIDVRPKSAETQPFEIARETFGERPVPAWMKVVPGSLRVLI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + ++ L+VE YS+ Sbjct: 178 FDRPVREQ---IDTVLAEQLIVELYSK 201 >gi|222103560|gb|ACM44309.1| small ribosomal protein subunit 4 [Aulacomnium turgidum] Length = 202 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + L ++ +P +++ + Sbjct: 117 ILVNDHIVDIPSYRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|26399192|sp|Q9M4C2|RR4_RICNA RecName: Full=30S ribosomal protein S4, chloroplastic gi|8017981|emb|CAB92155.1| small ribosomal protein 4 [Ricciocarpos natans] Length = 202 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTLKSKPGY---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N +V+I SY CK DVI +K + K + + + ++ +P +++ + + Sbjct: 117 ILINNSTVDIPSYNCKPKDVITIKDRPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWIFLKINELLVVEYYSR 200 >gi|194246704|ref|YP_002004343.1| 30S ribosomal protein S4 [Candidatus Phytoplasma mali] gi|254764605|sp|B3QZW0|RS4_PHYMT RecName: Full=30S ribosomal protein S4 gi|193807061|emb|CAP18497.1| SSU ribosomal protein S4 [Candidatus Phytoplasma mali] Length = 199 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S K+ RR+ +L K + R Y PG+HG++R K +GLQL+ KQK++ Sbjct: 1 MSRYTGSIWKVSRRLNYSLSETGKE-LIKRPYAPGMHGKKR-IKAKDYGLQLQEKQKVRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+F+ IFK+A + +G + LESRLD +VYR F T ARQ VNH H Sbjct: 59 TYG-ISEKQFKKIFKDAGKLKGIHGEMFLFLLESRLDNVVYRLGFAKTRQQARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I SY + G +I +K+KSK L V EA V +YIS+N + +V +V Sbjct: 118 ILVDGKKVDIPSYSLRVGQIITLKEKSKDLIIVKEALANKLNRV-DYISLNKE-LVGKYV 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP + +P ++ L+VEFY+R Sbjct: 176 RIPHRDELLP---NIKEQLIVEFYNR 198 >gi|123965706|ref|YP_001010787.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9515] gi|152112247|sp|A2BV69|RS4_PROM5 RecName: Full=30S ribosomal protein S4 gi|123200072|gb|ABM71680.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9515] Length = 202 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE K+ +S PG HGQ R+ + Y ++L KQK++ Sbjct: 1 MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE++ K+A G T NL+ LE+RLD + +R F TI +RQ VNH H Sbjct: 58 NYG-VSERQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 V VNG+ ++I Y+CK GDVI +K+K V + +VP +I ++ + Sbjct: 117 VTVNGKVLDIAGYQCKSGDVISIKEKKASKKLVEGNIEFPGLANVPPHIELDKPKLTGKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 N---GKCDREWVALEINELLVVEYYSR 200 >gi|26399172|sp|Q9FSE4|RR4_PLAAD RecName: Full=30S ribosomal protein S4, chloroplastic gi|10798670|emb|CAC12828.1| small ribosomal protein 4 [Plagiochila adiantoides] Length = 202 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRS 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LAERQLLKYMRIARKAKGSTGQILLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + +R +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|6002075|emb|CAA58946.1| ribosomal protein S4 [Ranunculus lingua] Length = 196 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + D +P++++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNFMDSSPHDELPKHLTLHPSQYKGSV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196 >gi|67035564|gb|AAY62713.1| small ribosomal protein subunit 4 [Arctoa fulvella] Length = 199 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K K A +++ +++ VP +++ N +I Sbjct: 117 NDHIVNIPSYRCKPQDFITIKNCQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|89147830|gb|ABD62763.1| ribosomal protein 4 [Lophocolea heterophylla] Length = 200 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ SY + K S + ++L KQK++ +YG Sbjct: 2 YRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H+ + Sbjct: 59 -LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHGHISI 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ Sbjct: 118 NNYIVDIPSYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQM 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 INR---EWINLKINELLVVEYYSR 198 >gi|139387442|ref|YP_001122796.1| ribosomal protein S4 [Phaseolus vulgaris] gi|152060557|sp|A4GG95|RR4_PHAVU RecName: Full=30S ribosomal protein S4, chloroplastic gi|112030964|gb|ABH88076.1| ribosomal protein S4 [Phaseolus vulgaris] gi|158187159|gb|ABW22792.1| ribosomal protein S4 [Phaseolus vulgaris] Length = 201 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G K P L Q R SK S + ++L KQK++ Sbjct: 1 MSRYRGPCFKKIRRLGYLPGLTSKKPTVKNE----LRNQLRFSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + +++G T L+ LE RLD I++R TI ARQF+NHRH Sbjct: 57 HYG-LTERQLLKYVRISGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPQARQFINHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I K + K + A RD +P +++V+ Sbjct: 116 VLVNGRIVDIPSYRCKPQDIITAKDEQKSKTLIQNYLDSAPRDKLPNHLTVHPFQYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199 >gi|328541078|gb|AEB21763.1| ribosomal protein S4 [Acromastigum cavifolium] Length = 199 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ + SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTSKTLKSKSSY---NDRSASNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNMVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINIKINELLVVEYYSR 197 >gi|255507228|ref|ZP_05382867.1| 30S ribosomal protein S4 [Chlamydia trachomatis D(s)2923] gi|289525669|emb|CBJ15150.1| SSU ribosomal protein S4P [Chlamydia trachomatis Sweden2] gi|296435236|gb|ADH17414.1| 30S ribosomal protein S4 [Chlamydia trachomatis E/150] gi|296438955|gb|ADH21108.1| 30S ribosomal protein S4 [Chlamydia trachomatis E/11023] Length = 209 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ +KE + + + + E RLD I+YR F TIFAA+Q V+H H Sbjct: 60 CYGMILEKQLVKAYKEVINKQRNVAQMFLEKFECRLDNIIYRLGFAKTIFAAQQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G I +K+KSK+LA V E+ + + +P Y+S++ Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179 Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205 V P + P+ + +++ EF S Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206 >gi|29839780|ref|NP_828886.1| 30S ribosomal protein S4 [Chlamydophila caviae GPIC] gi|33301548|sp|Q824X7|RS4_CHLCV RecName: Full=30S ribosomal protein S4 gi|29834127|gb|AAP04764.1| ribosomal protein S4 [Chlamydophila caviae GPIC] Length = 209 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 3/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ FKE +G + + E RLD +VYR F TIFAA+Q V+H H Sbjct: 60 CYGMILEKQLVKAFKEVINKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G + +K+KS++L SV E+ + E +P YISV+ N Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLKEKSRKLQSVQESLENRDEGSLPSYISVDKGNFKGEL 179 Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205 + P + + P+ + ++V EF S Sbjct: 180 LVSPEQDQIEAQLPLPVDVSVVCEFLS 206 >gi|166239980|gb|ABY86508.1| ribosomal protein S4 [Lychnis chalcedonica] Length = 205 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 107/209 (51%), Gaps = 9/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYVRIARKAKGATGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMVA 177 +LVNGR V+I SYRCK D I K + K + + ++P++++++ N A Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIMAKDEQKSRVLIQNFLDSSPPEELPKHLTLDPFPYNNKA 175 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I S + + LVVE+YSR Sbjct: 176 IIKEIIDS-NSKWVGLKINELLVVEYYSR 203 >gi|68164805|ref|YP_247601.1| ribosomal protein S4 [Cucumis sativus] gi|75317263|sp|Q4VZH3|RR4_CUCSA RecName: Full=30S ribosomal protein S4, chloroplastic gi|67511400|emb|CAJ00760.1| ribosomal protein S4 [Cucumis sativus] Length = 201 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRRPRFKKIRRLGALPGLTSKRP----KTGNDLKNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K + K + + +++P+++++ Sbjct: 116 ILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199 >gi|6002089|emb|CAA58954.1| ribosomal protein S4 [Typha angustifolia] Length = 196 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + + A ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDNQKSKGLIQNSIASAAHEELPKHLTIDSFQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|169805298|gb|ACA83748.1| ribosomal protein S4 [Conostomum pentastichum] Length = 202 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D I +K + K A + + ++ +P +++ N Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541124|gb|AEB21786.1| ribosomal protein S4 [Acromastigum divaricatum] Length = 199 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ + S+ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTGKTLKSKSSH---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH H+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSIDQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|3098148|gb|AAC15522.1| small ribosomal protein 4 [Encalypta rhaptocarpa] Length = 199 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +V+R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A +++ +++ VP ++S + +I Sbjct: 117 NDCIVNIPSYRCKPQDFISIKDRQKSQAIIIKNIDFSQKSKVPNHLSFDSLQKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|26399087|sp|O78678|RR4_OROMI RecName: Full=Plastid 30S ribosomal protein S4 gi|3421346|emb|CAA07624.1| ribosomal protein S4 [Orobanche minor] Length = 203 Score = 183 bits (466), Expect = 8e-45, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPKAEKDLI----NQSRFVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I K K + + + + +P +++++ Sbjct: 116 VLVNGRIVDIPSYRCKPLDIITAKDKQQSRTLIQNSLNSSPHAKIPNHLTLDLFQYKGIV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I +S + + L+VE+YSR Sbjct: 176 NQIINSK---WVGLKINEFLIVEYYSR 199 >gi|294337258|emb|CAQ52778.1| ribosomal protein S4 [Rigodium implexum] Length = 202 Score = 183 bits (466), Expect = 8e-45, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ N Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541126|gb|AEB21787.1| ribosomal protein S4 [Paracromastigum drucei] Length = 199 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ + SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTGKTLKSKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHIAI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCQPGDTITIRDKQKSQSIITKNINLFQDLKIPSHLTFDSRKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197 >gi|149390270|ref|YP_001294100.1| ribosomal protein S4 [Chloranthus spicatus] gi|172048687|sp|A6MMC4|RR4_CHLSC RecName: Full=30S ribosomal protein S4, chloroplastic gi|146744190|gb|ABQ43262.1| ribosomal protein S4 [Chloranthus spicatus] Length = 201 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D+I + + + + + ++P++++++ Sbjct: 116 ILVNSRIVDIPSYRCKPRDIITTRDEQRSRTLIQNHIDSSPHEELPKHLTLHSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---SIGLKINELLVVEYYSR 199 >gi|169805300|gb|ACA83749.1| ribosomal protein S4 [Bartramia stricta] Length = 202 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + ++ +P +++ N Sbjct: 117 ILVNDHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|118626085|emb|CAL39346.1| small ribosomal protein 4 [Jungermannia polaris] Length = 202 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+ SR Sbjct: 177 NQTINR---EWINLKINELLVVEYNSR 200 >gi|26399194|sp|Q9M4C3|RR4_PLARP RecName: Full=30S ribosomal protein S4, chloroplastic gi|8017979|emb|CAB92154.1| small ribosomal protein 4 [Plagiochasma rupestre] Length = 202 Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTFKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHQH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N +V+I SY CK D+I +K + K + + + ++ +P +++ + Sbjct: 117 ILINNNTVDIPSYNCKPKDIITIKDRQKSQSIITKNLNFFQKQKIPNHLTFDLIQFKGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIVDR---ECIYLKINELLVVEYYSR 200 >gi|3914873|sp|O47029|RR4_NAROD RecName: Full=30S ribosomal protein S4, chloroplastic gi|2808630|emb|CAA58940.1| ribosomal protein S4 [Narcissus x odorus] Length = 196 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNPLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + A R ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSIASAPREELPNHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|6002065|emb|CAA58939.1| ribosomal protein S4 [Musa x paradisiaca] Length = 196 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + L+ ++P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIALSPPEELPKHLTFDSFQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIDLKINELLVVEY 196 >gi|41323105|gb|AAR99782.1| small ribosomal protein 4 [Plagiochila disticha] Length = 202 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRIKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ILINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LV E+YSR Sbjct: 177 NQMINR---EWINLKINELLVAEYYSR 200 >gi|11467651|ref|NP_050703.1| ribosomal protein S4 [Guillardia theta] gi|133950|sp|P17072|RR4_GUITH RecName: Full=30S ribosomal protein S4, chloroplastic gi|70879|pir||R3MD4 ribosomal protein S4, chloroplast - Cryptomonas sp. chloroplast (strain phi) gi|3602976|gb|AAC35637.1| ribosomal protein S4 [Guillardia theta] Length = 200 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+GE TR+ PG HG + KPS + ++L KQK++ Sbjct: 1 MSRYRGAVIKIIRRLGELPGLT--RKTTTRTSRPGQHG-TQARKPSEYAIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ + A R +G T L+ LE RLD +++R PTI AARQ VNH H Sbjct: 58 NYG-LTEKQLLQYVRTAKRIKGSTGEALLQLLEMRLDNVIFRLGMAPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VN V+I SY+CK GD+I ++Q K + V Q ++P ++ ++ DN+ Sbjct: 117 IKVNNTRVSIPSYQCKAGDMISIRQHPKSQSIVKNYLQFPGLANMPNHLQIDKDNLTGKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I V + L+VE+YSR Sbjct: 177 NGIIERD-----WVALNELLIVEYYSR 198 >gi|295136909|ref|YP_003587741.1| ribosomal protein S4 [Lathyrus sativus] gi|293338631|gb|ADE43603.1| ribosomal protein S4 [Lathyrus sativus] Length = 201 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K R + SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKELPVRRV----GSEESLSSKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I K + K + + + A R VP +++++ D Sbjct: 116 VLVNGRIVDIPSYRCKPKDIITAKDEQKSRTIIQNSLKSAPRKRVPTHLTLHPDQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|118625985|emb|CAL39314.1| small ribosomal protein 4 [Symphyogyna podophylla] Length = 202 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G L G + +RS +K S + ++L KQK++ Sbjct: 1 MSRYRGPRAKIIRRLGA-LPGLSHEMIGSRSGYINQLAANKK--ISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARGAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 ++VN +V+I SY CK DVI ++ + + + + + L ER +P +++ + + Sbjct: 117 IIVNDDTVDIPSYNCKPQDVITIRDRRESQSVITKNINLFRERRIPNHLTFDSTRFCGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWIGLKINELLVVEYYSR 200 >gi|299830591|ref|YP_003735040.1| 30S ribosomal protein S4 [Durinskia baltica] gi|297384955|gb|ADI40254.1| 30S ribosomal protein S4 [Durinskia baltica] Length = 204 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K KI RR+G K G + K + +G++L KQK+K Sbjct: 1 MSRYRGPKLKISRRLGSLPGLTTKKSKKLNRPGKDGNSPDTSKKLTEYGIRLEEKQKLKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E + KEA R +G T L+ LE RLDT+ + F ++ ARQ VNH H Sbjct: 61 NYG-LTESQLFRYVKEARRRKGVTGLILLQLLEMRLDTLCFTLGFASSMAQARQLVNHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN + +NI S++C+ D I VK+KS + + R ++P + + +++ AT Sbjct: 120 ITVNNKVINIPSFQCRLNDTISVKEKSSSKNLIDANLKNNPRSEIPSNLKFDSNSLKATV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + P+ + LV+E+YSR Sbjct: 180 LDYCNR---EDIPLQLDELLVIEYYSR 203 >gi|157689532|gb|ABV65322.1| ribosomal protein S4 [Oxalis latifolia] Length = 201 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S+ Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKPNAVNSF----RNQSRLGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGPTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 V VNGR V+I SYRCK D I + + K A + + ++P+++++ Sbjct: 116 VFVNGRVVDIPSYRCKPRDFITPRNEQKSRALIRNYLDSSTHEELPKHLTLYPLQCKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|294337188|emb|CAQ52744.1| ribosomal protein S4 [Lembophyllum clandestinum] Length = 202 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ N Sbjct: 117 ILVNDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337142|emb|CAQ52721.1| ribosomal protein S4 [Heterocladium macounii] Length = 202 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ VP++++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKVPDHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541130|gb|AEB21789.1| ribosomal protein S4 [Telaranea wallichiana] Length = 202 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + K+ RR+G K+ SY K S + ++L KQK++ + Sbjct: 2 SRYRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTLNKKVSQYRIRLEEKQKLRFH 58 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ Sbjct: 59 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHI 117 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 +N V+I SY C+ GDVI +K K K + + + L + +P ++ + + + Sbjct: 118 SINNNIVDIPSYNCEPGDVITIKDKQKSRSIITKNINLFQNLKIPSHLIFDSIKLCGSIN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 178 QTINR---EWINLKINELLVVEYYSR 200 >gi|157689410|gb|ABV65261.1| ribosomal protein S4 [Alnus viridis subsp. sinuata] Length = 197 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 9/203 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K RR+G K P G L Q R SK S + ++L KQK++ +YG Sbjct: 1 RGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 GR V+I SYRCK D+I + + K A + + R ++P+++++ +I Sbjct: 116 GRIVDIPSYRCKPHDIITARDEQKSRALIQNYLDSSPREELPKHLTLQPFQYKGLVNQII 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 DSQ---WVGLKINELLVVEYYSR 195 >gi|46810988|gb|AAT01812.1| small ribosomal protein 4 [Anastrophyllum michauxii] Length = 197 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +V+I SY C+ GD+I ++ K K + V + L ++ +P +++ + + + + + Sbjct: 117 DTVDIPSYNCEPGDIITIRSKQKSQSIVTKNINLFQKLKIPSHLTFDLTQLRGSVNQTVN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWVDLKINELLVVEYYSR 195 >gi|160902229|ref|YP_001567810.1| RNA-binding S4 domain-containing protein [Petrotoga mobilis SJ95] gi|189045390|sp|A9BFZ1|RS4_PETMO RecName: Full=30S ribosomal protein S4 gi|160359873|gb|ABX31487.1| RNA-binding S4 domain protein [Petrotoga mobilis SJ95] Length = 211 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 90/217 (41%), Positives = 134/217 (61%), Gaps = 17/217 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ K+ RR G NL+ + K S + R+Y PG HG R+K K + + +QLR+ Sbjct: 1 MARYIGPLEKLSRREGINLYLKGKRSYTEKSALRKRNYVPGQHG-RQKQKLTQYAMQLRS 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQ +K+ YG + E++FR+ F+EA+RSR +T L+ LE RLD++VY+ F P AR Sbjct: 60 KQALKRMYG-LMERQFRNTFEEAERSRSGETGEVLMQLLERRLDSVVYQMGFAPNRRTAR 118 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE---RDVPEYISV 170 Q V H H+LVNG+ VNI SYR K GDVIEVK+KS+ + V E +L + R++P +++V Sbjct: 119 QIVTHGHILVNGKKVNIPSYRVKVGDVIEVKEKSRNIQQVREGLELVQEGYRNIPNWLNV 178 Query: 171 NHDNMVATFVRIPSSLK-DVPYPVIMQPNLVVEFYSR 206 +N TF R+P + DVP P+ ++E YS+ Sbjct: 179 EIENFRGTFQRLPKIDEMDVPVPLTN----IIELYSK 211 >gi|157689430|gb|ABV65271.1| ribosomal protein S4 [Bulnesia arborea] Length = 200 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPKAKTIT----RNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ +E RLD I++R TI ARQFVNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKTKGSTGQVLLQLIEMRLDNILFRLGMASTIPQARQFVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVN VNI SYRCK D+I V+ K V +++ +++++ Sbjct: 116 ILVNDHIVNIPSYRCKPRDIITVRDNQKSRTLVQNYLDSPNQELAKHLTLQPFQYKGLVN 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 QIIDSK---WVGLRINELLVVEYYSR 198 >gi|11465479|ref|NP_045130.1| ribosomal protein S4 [Cyanidium caldarium] gi|14195190|sp|Q9TLY7|RR4A_CYACA RecName: Full=30S ribosomal protein S4, chloroplastic gi|6466382|gb|AAF12964.1|AF022186_87 unknown [Cyanidium caldarium] Length = 202 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 115/207 (55%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K +I RR+GE K N +Y PG + S + ++L+ KQK++ Sbjct: 1 MSRYTGPKIRIIRRLGELPALTTKKVKN--NYPPG-REWSTNEELSEYAIRLQEKQKIRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+EK+ R K+A +SRG T L++ LE RLD IV RA PTI A+RQ V+H+H Sbjct: 58 NYG-INEKQLRRYVKKAKKSRGSTGSYLLNLLEMRLDNIVLRAGLAPTIAASRQLVSHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATF 179 + VN + VNI S++C GD I VK+ +K + L + + + P+Y+ VN DNM A Sbjct: 117 IEVNNKIVNIPSFQCSIGDTIHVKKSNKSRQLIDLNSRRDTTKFFPKYLEVNKDNMGARV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+ + + LVVEFYSR Sbjct: 177 VKTMDKQD---VNLTINELLVVEFYSR 200 >gi|255002915|ref|ZP_05277879.1| 30S ribosomal protein S4 [Anaplasma marginale str. Puerto Rico] gi|255004043|ref|ZP_05278844.1| 30S ribosomal protein S4 [Anaplasma marginale str. Virginia] Length = 203 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 96/198 (48%), Positives = 130/198 (65%), Gaps = 2/198 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G NLWGR K PV TR+Y PG HG K S FG Q A QK K YY +S Sbjct: 7 KYRASRRLGVNLWGRSKDPVATRNYPPGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 65 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ R+ F A +GDT NL+ LESRL +VY A FVPT+F+ARQ V+H+HV VNG+ Sbjct: 66 KQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 125 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI S+ K GDV+++++++ +L VL A Q ER VP+++ V+ A ++R+P + Sbjct: 126 VNIPSFSVKPGDVVQIRERATELPMVLAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE 185 Query: 188 DVPYPVIMQPNLVVEFYS 205 VPYP M+ NLVVEF+S Sbjct: 186 -VPYPANMEVNLVVEFFS 202 >gi|156618828|ref|YP_001430110.1| ribosomal protein S4 [Cuscuta reflexa] gi|171769780|sp|A7M968|RR4_CUSRE RecName: Full=Plastid 30S ribosomal protein S4 gi|156556013|emb|CAM98396.1| ribosomal protein S4 [Cuscuta reflexa] Length = 201 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P R L Q R K S++ ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRTVR----DLRNQSRSGKKSHYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ S + A +++G T LI LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLISYVRIARKAKGSTGEVLIQLLEMRLDNILFRLGMAYTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K K K A + + + R ++P +++++ Sbjct: 116 ILVNGHIVDIPSYRCKPRDIITSKDKPKSGALIKNSIKAFPREELPNHLTLHPAPYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 176 NQIIDTK---WVGLKINELLVVEYYSR 199 >gi|149390444|ref|YP_001294272.1| ribosomal protein S4 [Illicium oligandrum] gi|172048705|sp|A6MMU6|RR4_ILLOL RecName: Full=30S ribosomal protein S4, chloroplastic gi|147917397|gb|ABQ52521.1| ribosomal protein S4 [Illicium oligandrum] Length = 203 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 11/209 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGSLPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMVA 177 +LVNGR V+I SYRCK D+I + + + A + + +++ ++P++++++ Sbjct: 116 ILVNGRLVDIPSYRCKPRDIITTRDEHRSRALIQNSIDSSQKEELPKHLTLHSLQYQYKG 175 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 LVNQIIDSK---WVGLKINELLVVEYYSR 201 >gi|212550427|ref|YP_002308744.1| 30S ribosomal protein S4 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226697799|sp|B6YQ61|RS4_AZOPC RecName: Full=30S ribosomal protein S4 gi|212548665|dbj|BAG83333.1| 30S ribosomal protein S4 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 197 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 112/206 (54%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R GE ++G K+ S RRK K S +G+QLR KQK K Sbjct: 1 MARYIGPKTKIACRFGELIFGPDKAFSIRNSSS-----SRRKKKTSEYGIQLREKQKAKY 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E +FR F++A RSRG T L+ LESRLD +VYR T ARQ V+H+H Sbjct: 56 IYGVL-ENQFRGFFEKASRSRGITGVVLLQLLESRLDNLVYRMGLAKTRAEARQLVSHKH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + ++ VNI SY K G +I V++++K L +L+ A + +I + +M A ++ Sbjct: 115 ITIDNNVVNIPSYLVKPGQIIGVRERAKSLEIILDNLIRANHNKYSWIEYDKSSMSARYL 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP + P ++ L+VE YS+ Sbjct: 175 YIPERMD---IPENIKEQLIVELYSK 197 >gi|48527423|gb|AAT45844.1| small ribosomal protein 4 [Plagiochila trabeculata] Length = 202 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKLKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMCIARKAKGSTGEVLLQLLEMRSDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDMVNIPSYNCESGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + L VE+YSR Sbjct: 177 NQMINR---EWINLKINELLAVEYYSR 200 >gi|77862555|gb|ABB04550.1| small ribosomal protein 4 [Riccia ciliifera] Length = 201 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTFKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYIHIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N + V+I SY CK DVI +K + K + + ++ +P +++ + + Sbjct: 117 LINNKIVDIPSYNCKPKDVITIKDRQKSQLIITKNLNFFQKQKIPNHLTFDLIQLKGLIN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 177 QVVDR---EWIYLKINELLVVEYYSR 199 >gi|6002023|emb|CAA58918.1| ribosomal protein S4 [Alisma plantago-aquatica] Length = 196 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + V + ++P++++V+ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKTLVQNYIASSSHEELPKHLTVDSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196 >gi|26399097|sp|P59138|RR4_CYABU RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504377|emb|CAC80633.1| small ribosomal protein 4 [Cyathophorum bulbosum] Length = 202 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---ITQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMFPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SY+CK D I +K + K A + + + ++ +P +++ N+ Sbjct: 117 ILVNGPIVDIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|67035598|gb|AAY62730.1| small ribosomal protein subunit 4 [Bryoxiphium norvegicum] Length = 202 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K A +++ +++ VP +++ N + Sbjct: 119 VNDRIVNIPSYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 179 I---LDRESINLKINELLVVEYYSR 200 >gi|7524902|ref|NP_045904.1| ribosomal protein S4 [Chlorella vulgaris] gi|417720|sp|P32975|RR4_CHLVU RecName: Full=30S ribosomal protein S4, chloroplastic gi|285704|dbj|BAA01767.1| ribosomal protein S4 ['Chlorella' ellipsoidea] gi|2224496|dbj|BAA57980.1| 30S ribosomal protein S4 [Chlorella vulgaris] Length = 207 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 113/212 (53%), Gaps = 13/212 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54 M++ K +I RR+GE K+ TR + PG HG ++K +K S + ++L+ Sbjct: 1 MARYRGPKLRIVRRLGELPGLTQKN--CTRDFPPGQHGPKKKGGGNQKTKESQYAVRLKE 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++ YG ISE++ S +EA + +G T L+ LE RLDTI++R F PTI AARQ Sbjct: 59 KQKLRFNYG-ISERQLMSYVREARKRKGSTGEILLQILEMRLDTIIFRLGFAPTIAAARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 +NH H++VNGR V+I S CK D I V S+ L S D P Y+ VN + Sbjct: 118 LINHGHIVVNGRRVDIPSSLCKVNDSISVALNSQNFVKNLLQSFTKTLDAP-YLEVNQEK 176 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A + + LVVEFYSR Sbjct: 177 LSAVVRDNIPR---EAVSLQINELLVVEFYSR 205 >gi|294337252|emb|CAQ52775.1| ribosomal protein S4 [Pseudoleskeopsis zippelii] Length = 202 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKAPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRC D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCXPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|256826599|ref|YP_003150558.1| 30S ribosomal protein S4P [Cryptobacterium curtum DSM 15641] gi|256582742|gb|ACU93876.1| SSU ribosomal protein S4P [Cryptobacterium curtum DSM 15641] Length = 197 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++G + + ++ +R+ K S +G+QLR KQK K Sbjct: 1 MAVNRTPVLKRCRQLGIDPIVLGYTGKESKRQP------KRRRKESEYGMQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR F+ A G T NL++ LESRLD IV+R F T ARQ V H H Sbjct: 55 IYG-VQEKQFRGYFRRAKSQSGITGENLMAILESRLDNIVFRLGFARTRREARQTVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VNG V+I SYR + GD+I V K+K+L + A ER VP ++ V+ + + + Sbjct: 114 ITVNGNRVDIPSYRVRPGDLIAVAPKAKELLVIKSALVSNERVQVPAWLEVDIEKLQGSV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ + + + L+VE YS+ Sbjct: 174 LSLPTREQ---IDLDINEQLIVELYSK 197 >gi|140083431|gb|ABO84827.1| ribosomal protein S4 [Bartramia halleriana] Length = 202 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D I +K + K + + ++ +P +++ N Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLENKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|63101091|gb|AAY33170.1| small ribosomal protein 4 [Platyneuron laticostatum] Length = 202 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R VNI SYRCK D I +K + K A +++ +++ +P +++ + Sbjct: 117 ILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDQESIGLKINELLVVEYYSR 200 >gi|50365403|ref|YP_053828.1| 30S ribosomal protein S4 [Mesoplasma florum L1] gi|61215527|sp|Q6F0M9|RS4_MESFL RecName: Full=30S ribosomal protein S4 gi|50363959|gb|AAT75944.1| 30S ribosomal protein S4 [Mesoplasma florum L1] Length = 208 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 MS+ S K RR G ++ K S R PG HG+ + + K S +G QL+ KQK Sbjct: 1 MSRYTGSTFKKARRYGFSILENGKEFSKGKKRVTTPGQHGKDKARLKMSGYGAQLQEKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 +K YG ++E++FR+ F +A + G N + LESRLD IV+R F T AARQ V Sbjct: 61 VKFMYG-MTERQFRNTFAKAKKVHGGILGTNFLVLLESRLDNIVFRLGFAMTRQAARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 NH H+LVNG+ ++I SY+ K GD IEVK+ K+ + EA Q E V E++ V+ N+ Sbjct: 120 NHGHILVNGKKLDIPSYQVKPGDSIEVKEAMKKNDKIAEALQNNESTV-EFVKVDKANLK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FVR+P + + + L+VE+Y+R Sbjct: 179 GQFVRLPERQE---LNLEINDALIVEWYNR 205 >gi|28202174|ref|NP_777415.1| ribosomal protein S4 [Anthoceros formosae] gi|41688603|sp|Q85AX4|RR4_ANTFO RecName: Full=30S ribosomal protein S4, chloroplastic gi|27807876|dbj|BAC55351.1| ribosomal protein S4 [Anthoceros formosae] gi|27807997|dbj|BAC55444.1| ribosomal protein S4 [Anthoceros formosae] Length = 202 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P + SY ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTSKTPESKPSY---INQSTSSRKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VLVN +V+I S+RCK DVI ++ + K + + E+ +P +++ N + Sbjct: 117 VLVNDCTVDIPSFRCKPQDVITIRDRQKSQNLMKRSRDSYEKYGIPNHLTFNSVQNIGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 NETIDRD---WIGLKINELLVVEYYSR 200 >gi|317046175|ref|YP_004072464.1| ribosomal protein S4 [Corynocarpus laevigata] gi|309252892|gb|ADO60312.1| ribosomal protein S4 [Corynocarpus laevigata] Length = 201 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RTGSDLKNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTISQARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K + + A + + ++P+ ++++ Sbjct: 116 ILVNGCIVDIPSYRCKPRDIITAKDEQRSRALIQNYLDSSPHEELPKDLTLHPVQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---SVGLKINELLVVEYYSR 199 >gi|228016028|gb|ACP50867.1| ribosomal protein S4 [Pinus resinosa] Length = 201 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|222103506|gb|ACM44282.1| small ribosomal protein subunit 4 [Marsupella commutata] Length = 199 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ + +Y + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ V Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + Sbjct: 117 NNDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 VNR---EWVNLKINELLVVEYYSR 197 >gi|48527353|gb|AAT45809.1| small ribosomal protein 4 [Plagiochila arbuscula] Length = 202 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIIIIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRVSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---ELIDLKINELLVVEYYSR 200 >gi|229815744|ref|ZP_04446069.1| hypothetical protein COLINT_02793 [Collinsella intestinalis DSM 13280] gi|229808660|gb|EEP44437.1| hypothetical protein COLINT_02793 [Collinsella intestinalis DSM 13280] Length = 198 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++G + S + +R+ K S +G+QLR KQK+K Sbjct: 1 MAIDRTPVLKRCRQLGIDPVELGYSSKKE-----SIRQPKRRRKESEYGMQLREKQKVKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++ A R G T NL++ LE+RLD +V+R F T ARQ V H H Sbjct: 56 IYGVL-EKQFHHYYEHALRMDGVTGENLMTILETRLDNVVFRLGFARTRKEARQTVRHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I SYR K GDVI V +K + L + EA +ER +VP ++ V+ + + Sbjct: 115 FTVNGKRVDIPSYRVKAGDVIAVGEKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGNV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +PS + + L+VE YS+ Sbjct: 175 ISLPSRDQ---ISGDINEQLIVELYSK 198 >gi|190570680|ref|YP_001975038.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019072|ref|ZP_03334879.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226695099|sp|B3CP11|RS4_WOLPP RecName: Full=30S ribosomal protein S4 gi|190356952|emb|CAQ54338.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995181|gb|EEB55822.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 204 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 131/206 (63%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K++I RR+G NLWGR K VN R Y PG HG K S FG Q A +K K Sbjct: 1 MTTVINRKYRISRRLGVNLWGRAKDSVNKRKYPPGQHGILGFKKLSDFGKQFAAHKKFKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY IS K+ R F +A + +G T+ N I LESRL +++Y + FVPTI++A+Q ++H+H Sbjct: 61 YYA-ISSKQLRRTFLDAYKRKGYTADNFIGALESRLSSVLYHSGFVPTIYSAKQLISHKH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VN + VNI SYR K GD++++++++ ++ ++EA Q ER P+Y+ + + ++ Sbjct: 120 VTVNDKVVNISSYRVKPGDIVKIRERAAKIPILIEAEQKQERKAPDYLEADSKALSVKYL 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P +VPY M+ NLVVEFYSR Sbjct: 180 RAPQ-YSEVPYSADMEVNLVVEFYSR 204 >gi|115604936|ref|YP_784388.1| ribosomal protein S4 [Drimys granadensis] gi|122164439|sp|Q06GZ5|RR4_DRIGR RecName: Full=30S ribosomal protein S4, chloroplastic gi|112032664|gb|ABH88299.1| ribosomal protein S4 [Drimys granadensis] Length = 201 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + + A + + ++ +++S+ Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITTRDEQRSRALIQNYMDSSPHEELAKHLSLYSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NQIIDIK---WIGLKINELLVVEYYSR 199 >gi|41323131|gb|AAR99795.1| small ribosomal protein 4 [Plagiochila semidecurrens] Length = 202 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNH H Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + L V++YSR Sbjct: 177 NQMIDR---EWINLKINELLGVKYYSR 200 >gi|20531077|gb|AAM27360.1| ribosomal protein 4 [Diphyscium foliosum] Length = 201 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + +I RR+G K+P + ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVRIIRRLGALPGLTSKTPQLKSNS---INQSASNKKISQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 LVN R VNI SYRCK D I +K++ K +++ L+++ +P +++ N Sbjct: 117 LVNDRIVNIPSYRCKPQDFITIKERQKSQGIIVKNMDLSQKYKIPNHLTFNSLEKKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 QI---LDRESIGLKINELLVVEYYSR 199 >gi|26399190|sp|Q9M4C1|RR4_MONFO RecName: Full=30S ribosomal protein S4, chloroplastic gi|8017421|emb|CAB92137.1| small ribosomal protein 4 [Monoclea forsteri] Length = 202 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTTKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R T+ ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMALTVPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N V+I SY CK DVI +K + K + + + ++ VP ++S + + Sbjct: 117 ILINNSMVDIPSYNCKPKDVITIKDRPKSQSIITKNLNSFQKSKVPNHLSFDLMQVKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 177 NQMIDR---EWILLKINELLVVEYYSR 200 >gi|86438900|emb|CAJ55425.1| small ribosomal protein 4 [Plagiochila korthalsiana] Length = 198 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 IAINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 ++ + + + LVVE+Y Sbjct: 177 SQMINR---EWINLKINELLVVEYY 198 >gi|62079663|gb|AAX61177.1| small ribosomal protein 4 [Makinoa crispata] Length = 196 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K P + G Q K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTNKIPKSK----SGFTNQASNKKLSQYRIRLEEKQKLRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ A R++G T L+ LE RLD I++R PTI +ARQ VNHRH+LVN Sbjct: 56 TERQLLKYVCIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPSARQLVNHRHILVNN 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ +VI ++ K + +++ L++R VP ++ + + ++ Sbjct: 116 YPVDIPSYNCEPENVISIRDPKKSRSIIIKNIDLSQRAKVPNHLIFDSTQFRGSVNQMID 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 176 RD---WINLKINELLIVEYYSR 194 >gi|6002081|emb|CAA58950.1| ribosomal protein S4 [Tradescantia pallida] Length = 196 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNH+H Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHKH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + L+ ++P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSISLSPHEELPKHLTFDSFQHKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 + S + + LVVE+ Sbjct: 176 NQTIDSK---WIGLKINELLVVEY 196 >gi|94502225|ref|ZP_01308711.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833841|ref|YP_001598037.1| 30S ribosomal subunit protein S4 [Candidatus Sulcia muelleri GWSS] gi|172048400|sp|A8Z690|RS4_SULMW RecName: Full=30S ribosomal protein S4 gi|94451196|gb|EAT14135.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206331|gb|ABS30641.1| 30S ribosomal subunit protein S4 [Candidatus Sulcia muelleri GWSS] Length = 195 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K KI R+ GE ++G+ + Y PG + R K +++ QL KQK+K Sbjct: 1 MARYIGPKTKISRKFGELIYGKTNKSFEKKKYPPG-NSSSRNIKKTFYSTQLLEKQKIKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I E++F +F +A + +G L+ ESRLD IVYR + ARQ V+HRH Sbjct: 60 TYG-ILERQFLKMFYKASKKKGIKGEILLQLCESRLDNIVYRLNLSHSRPEARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI S+ K GD I +K+K K A+ + +++S +++ M+ F Sbjct: 119 ITVNGKIVNIPSFNLKPGDKISLKEKHKHKANKNKLLGS------DWLSWDNEKMIGIFK 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP+ + + L+VE YS+ Sbjct: 173 YIPNRNQ---ITENINEKLIVELYSK 195 >gi|108796928|ref|YP_636228.1| ribosomal protein S4 [Pseudendoclonium akinetum] gi|90101666|sp|Q3ZJ39|RR4_PSEAK RecName: Full=30S ribosomal protein S4, chloroplastic gi|56159626|gb|AAV80650.1| ribosomal protein S4 [Pseudendoclonium akinetum] Length = 205 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 10/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY---FGLQLRAKQK 57 MSK + ++ R++G+ K ++ ++ PG HGQ + +GL+L KQK Sbjct: 1 MSKYRGPRLRLVRKLGKLPGLTSK--ISKKTNTPGEHGQPQNKLLKNRSPYGLRLLEKQK 58 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 ++ Y +I+E++ K+A G T L++ LE RLD IVYR PTI AARQ V+ Sbjct: 59 LRFNY-NITERQLLRYVKQAKNLTGSTGEILLAILEMRLDNIVYRLGMAPTIVAARQLVS 117 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMV 176 H H+LVN + VNI SY C+ +VI VK K V + + A VP ++S N +N+V Sbjct: 118 HGHILVNKQKVNIPSYPCQLKEVISVKDKKASRDLVKKFVQESAVNPVPSHLSFNKENLV 177 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LV+E+YSR Sbjct: 178 GIVNNVATR---EWIGLQINELLVIEYYSR 204 >gi|294337152|emb|CAQ52726.1| ribosomal protein S4 [Homalia lusitanica] Length = 202 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLPNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|46811014|gb|AAT01825.1| small ribosomal protein 4 [Herbertus alpinus] Length = 197 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGTLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + + Sbjct: 117 DIVDIPSYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGFINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|328541148|gb|AEB21798.1| ribosomal protein S4 [Lepidozia laevifolia] Length = 199 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ +Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTLKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I +K K K + + + L + +P +++ + + + +I Sbjct: 117 NNNIVDIPSYNCEPGDIITIKDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|294337194|emb|CAQ52747.1| ribosomal protein S4 [Leptopterigynandrum sp. Koponen 46079] Length = 202 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ N Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIDLKINELLVVEYYSR 200 >gi|328541104|gb|AEB21776.1| ribosomal protein S4 [Chloranthelia denticulata] Length = 199 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ S+ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV + Sbjct: 58 -LTERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIELCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|118625973|emb|CAL39308.1| small ribosomal protein 4 [Gongylanthus scariosus] Length = 202 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+G K+ Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKVIRRLGVLPGLTNKTLKPKSGY---IDRSISNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++G T L+ LE R D ++R PTI ARQ VNH H Sbjct: 58 HYG-LTERQLLKYVRIAREAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I VK K K + + + L P +++++ + + Sbjct: 117 ISINNSIVDIPSYNCEPGDIITVKDKRKSRSVITKNINLFRNLRTPSHLTLDSTELRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 DQTINR---EWIDLKINELLVVEYYSR 200 >gi|294337084|emb|CAQ52692.1| ribosomal protein S4 [Bryolawtonia vancouveriensis] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ N Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|290790782|gb|ADD63039.1| ribosomal protein S4 [Potamophila parviflora] Length = 201 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P + + H K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTPKSRSNLKKKFH----SGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199 >gi|328541096|gb|AEB21772.1| ribosomal protein S4 [Mastigobryum limbatum] Length = 199 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ S+ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV + Sbjct: 58 -LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWVNLKINELLVVEYYSR 197 >gi|63191663|gb|AAY34793.1| small ribosomal protein subunit 4 [Dixonia thamnioides] gi|294337132|emb|CAQ52716.1| ribosomal protein S4 [Haplohymenium pseudotriste] gi|294337182|emb|CAQ52741.1| ribosomal protein S4 [Hypnum cupressiforme] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|194033151|ref|YP_002000489.1| ribosomal protein S4 [Brachypodium distachyon] gi|193075559|gb|ACF08642.1| ribosomal protein S4 [Brachypodium distachyon] Length = 201 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSQSLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199 >gi|11467819|ref|NP_050870.1| ribosomal protein S4 [Nephroselmis olivacea] gi|26399202|sp|Q9TKX5|RR4_NEPOL RecName: Full=30S ribosomal protein S4, chloroplastic gi|5880748|gb|AAD54841.1|AF137379_64 ribosomal protein S4 [Nephroselmis olivacea] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+GE K + R PG HG K KPS + ++L KQK++ Sbjct: 1 MSRYRGPRLKIVRRLGELPGLTRK--MAKRKSPPGQHGAASK-KPSQYRIRLEEKQKLRY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ + A R++G + NL+ LE RLDT ++R PT+ +ARQ + H H Sbjct: 58 NYG-VTEKQLLRYMQRARRAKGSSGENLLQLLEMRLDTTIFRLGMAPTMLSARQLITHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATF 179 +LV+ + VNI SY+C + I ++ S+ + V P ++ + + + Sbjct: 117 ILVSEQRVNIPSYQCSPKEKISIRSNSRSRKLIEGYMSTMGSIVTPPHLELKKEKLEGNI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205 I + + LVVE+YS Sbjct: 177 QEIIDRQ---WVGLPINELLVVEYYS 199 >gi|290487064|gb|ADD29916.1| ribosomal protein S4 [Dillenia indica] Length = 201 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D++ VK + K A + + ++P++++++ Sbjct: 116 ILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---CVGLKINELLVVEYYSR 199 >gi|294337230|emb|CAQ52764.1| ribosomal protein S4 [Orthostichella rigida] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNGCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|83416498|gb|ABC18269.1| small ribosomal subunit protein 4 [Amphidium mougeotii] Length = 200 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K A +++ +++ VP +++ N + Sbjct: 117 VNDRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNVDFSQKSKVPNHLTFNSLEKKGLVNK 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDQESIGLKINELLVVEYYSR 198 >gi|294337228|emb|CAQ52763.1| ribosomal protein S4 [Pendulothecium punctatum] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|157325532|ref|YP_001468310.1| ribosomal protein S4 [Ipomoea purpurea] gi|171769950|sp|A7Y3D8|RR4_IPOPU RecName: Full=30S ribosomal protein S4, chloroplastic gi|157056760|gb|ABV02350.1| ribosomal protein S4 [Ipomoea purpurea] Length = 203 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAESDLRNQSRSGKKSQYCIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTERQLIQYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD-NMVAT 178 +LVNGR V+I SYRCK D+I K K A + + + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITSKDNQKSRALIQNSLESSPHEELPNHLALDPSPYYKGL 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LV+E+YSR Sbjct: 176 VNQIIDTK---WVGLKINEFLVIEYYSR 200 >gi|328541162|gb|AEB21805.1| ribosomal protein S4 [Lepidozia trichodes] Length = 200 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSTKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|222103444|gb|ACM44251.1| small ribosomal protein subunit 4 [Haplocladium microphyllum] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ N Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337244|emb|CAQ52771.1| ribosomal protein S4 [Porotrichum frahmii] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCXVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|210631179|ref|ZP_03296790.1| hypothetical protein COLSTE_00675 [Collinsella stercoris DSM 13279] gi|210160146|gb|EEA91117.1| hypothetical protein COLSTE_00675 [Collinsella stercoris DSM 13279] Length = 198 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++G + S + +R+ K S +G+QLR KQK+K Sbjct: 1 MAIDRTPVLKRCRQLGIDPVELGYSSKKE-----SIRQPKRRRKESEYGMQLREKQKVKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++ A R G T NL++ LE+RLD +V+R F T ARQ V H H Sbjct: 56 IYGVL-EKQFHHYYEHALRMDGVTGENLMTILETRLDNVVFRLGFARTRKEARQSVRHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I SYR K GDV+ V +K + L + EA +ER +VP ++ V+ + + Sbjct: 115 FTVNGKRVDIPSYRVKAGDVVAVGEKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGNV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +PS + + L+VE YS+ Sbjct: 175 ISLPSREQ---ISGDINEQLIVELYSK 198 >gi|26399180|sp|Q9FT08|RR4_BUCRO RecName: Full=30S ribosomal protein S4, chloroplastic gi|10798455|emb|CAC12803.1| small ribosomal protein 4 [Bucegia romanica] Length = 202 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A ++G T + E RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLKYVRIARGAKGSTGQISLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN VNI SYRCK D I +K K + + +L+++ +P +++ N Sbjct: 117 ILVNNNIVNIPSYRCKPQDFITIKNSQKSQTIITKNIELSQKYQIPNHLTFNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541102|gb|AEB21775.1| ribosomal protein S4 [Mastigobryum lenormandii] Length = 199 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ S+ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV + Sbjct: 58 -LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAM 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|6002069|emb|CAA58942.1| ribosomal protein S4 [Nelumbo nucifera] Length = 196 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----KAGSDFRNQARSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVCIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196 >gi|294337126|emb|CAQ52713.1| ribosomal protein S4 [Gollania ruginosa] Length = 202 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|228015961|gb|ACP50801.1| ribosomal protein S4 [Pinus ponderosa] gi|228016414|gb|ACP51247.1| ribosomal protein S4 [Pinus thunbergii] gi|228016480|gb|ACP51312.1| ribosomal protein S4 [Pinus torreyana subsp. insularis] gi|228017479|gb|ACP52295.1| ribosomal protein S4 [Pinus merkusii] gi|228017735|gb|ACP52547.1| ribosomal protein S4 [Pinus pinaster] gi|270485094|gb|ACP51372.2| ribosomal protein S4 [Pinus torreyana subsp. torreyana] Length = 201 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|118625991|emb|CAL39317.1| small ribosomal protein 4 [Gongylanthus reniformis] Length = 202 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGVLPGSTNKTLKPKSGY---IDRSISNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++G T L+ E R D ++R PTI ARQ VNH H Sbjct: 58 HYG-LTERQLLKYVRIAREAKGSTGQVLLQLPEMRSDNTIFRLGMAPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I VK K K + + + L + P +++++ + + Sbjct: 117 ISINNSIVDIPSYNCEPGDIITVKDKRKSRSVITKNINLFKNLRTPSHLTLDSTELRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 DQTINR---EWIDLKVNELLVVEYYSR 200 >gi|182420375|ref|ZP_02951597.1| ribosomal protein S4 [Clostridium butyricum 5521] gi|237668617|ref|ZP_04528601.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375741|gb|EDT73339.1| ribosomal protein S4 [Clostridium butyricum 5521] gi|237656965|gb|EEP54521.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 199 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N+ G PK+ G R K S +G QL KQ+++ Sbjct: 1 MAKMMGPRFKLCRRLGLNVNGHPKAMKRA-----GNGSARDSKKLSPYGTQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F + ++A + + T + LI LE RLD IV+R F ++ ARQ V H H Sbjct: 56 YYG-VMEKQFATYARKAFKDKDQTGYALIKRLECRLDNIVFRLGFASSLAQARQMVVHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG VNI S+ GDV+ +++KS++ + +V Y++ N + + Sbjct: 115 ILVNGEKVNIPSFNVNIGDVVALREKSQKNEMFRDNFLSNILNVYPYLTKNEAEFSGSLL 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P+ + +LVVE+YS+ Sbjct: 175 RYPERSE---VPIQINDSLVVEYYSK 197 >gi|548869|sp|P36461|RR4_IRIPA RecName: Full=30S ribosomal protein S4, chloroplastic gi|439946|emb|CAA82453.1| ribosomal protein S4 [Iris pallida] Length = 196 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|66990676|emb|CAI29116.1| small ribosomal protein 4 [Plagiochila stricta] Length = 198 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 ++ + + + LVVE+Y Sbjct: 177 NQMINR---EWINLKINEVLVVEYY 198 >gi|6002033|emb|CAA58924.1| ribosomal protein S4 [Butomus umbellatus] Length = 196 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + V + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKTLVQNSIASSSHEELPKHLTIDSSQHKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196 >gi|6002049|emb|CAA58934.1| ribosomal protein S4 [Elettaria cardamomum] Length = 196 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGIASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K K + A + + L+ ++P++++ + Sbjct: 116 ILVNGGIVDIPSYRCKPRDIITTKDKQRSKALIKNSISLSPHEELPKHLTFDSFQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIVDSK---WIGLKINELLVVEY 196 >gi|3914842|sp|O47026|RR4_ASPSB RecName: Full=30S ribosomal protein S4, chloroplastic gi|2808628|emb|CAA58922.1| ribosomal protein S4 [Asparagus maritimus] Length = 196 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNPLRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQTSIASSPHEELPNHLTIDSFQYKGLI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|294337068|emb|CAQ52684.1| ribosomal protein S4 [Andoa berthelotiana] Length = 202 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|67035738|gb|AAY62800.1| small ribosomal protein subunit 4 [Distichium capillaceum] Length = 199 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ + +++ VP +++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNIEFSQKYKVPNHLTFNSLQKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|290487082|gb|ADD29925.1| ribosomal protein S4 [Ximenia americana] Length = 201 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRAR----SDLRNQSRSGKRSQYRIRLEEKQKLRL 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++F + +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQFLKYVRITGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K A + + +++P+++++ Sbjct: 116 ILVNGRVVDIPSYRCKPRDIITARDEQKSKALIQNYLDSSPHKELPKHLALRAFQYKGFV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LV+E+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVIEYYSR 199 >gi|5911470|emb|CAA58930.1| ribosomal protein S4 [Delphinium staphisagria] Length = 196 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRFGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + K + + ++P++++++ + Sbjct: 116 ILVNGRIVDIPSYRCKARDIITTRDEQKSKVLIQNYLDSSPHEELPKHLTLHASQYKGSV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196 >gi|290790713|gb|ADD62971.1| ribosomal protein S4 [Oryza australiensis] Length = 201 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNGR V+I S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 IFVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199 >gi|62288923|sp|P69629|RR4_AGABR RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288953|sp|P69679|RR4_YUCFI RecName: Full=30S ribosomal protein S4, chloroplastic gi|2808626|emb|CAA58916.1| ribosomal protein S4 [Agave bracteosa] gi|2808632|emb|CAA58955.1| ribosomal protein S4 [Yucca filamentosa] Length = 196 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----RSGSDLKNPLRSVKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|294337226|emb|CAQ52762.1| ribosomal protein S4 [Papillaria crocea] Length = 202 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 TQI---LDRESIGLKINELLVVEYYSR 200 >gi|110456648|gb|ABG74767.1| ribosomal protein S4 [Jasminum leratii] Length = 203 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + + K RR+G KSP G L + R K S + ++L KQK+ Sbjct: 1 MPRYLGPRFKKIRRLGALPGLTNKSP----KAGSDLRKKPRSRKKSQYRIRLEEKQKLCF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG + + + + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LRDYQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+ SYRCK D+I K K + + + +++P +++++ Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|26399120|sp|P59150|RR4_TAKLE RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504727|emb|CAC80628.1| small ribosomal protein 4 [Takakia lepidozioides] Length = 202 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR G + K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRPGVSPGLTSKTLKSKSNY---IDRSTSNKKVSQYRVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH H Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N ++I SY + GD+I ++ K + + + + L ++ +P ++S + + + Sbjct: 117 ISMNNNIIDIPSYNREPGDIITIRNKLESRSMISKNINLFQKLKMPSHLSFDLTGLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200 >gi|307697313|gb|ADN86111.1| ribosomal protein S4 [Chasmanthium latifolium] Length = 201 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGTLPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ +P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 QKILDRK---WVGLKINELLVVEYYSR 199 >gi|294337088|emb|CAQ52694.1| ribosomal protein S4 [Straminergon stramineum] Length = 202 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S L+ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|237654187|ref|YP_002890501.1| 30S ribosomal protein S4 [Thauera sp. MZ1T] gi|237625434|gb|ACR02124.1| ribosomal protein S4 [Thauera sp. MZ1T] Length = 203 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 5/204 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ R +G L G + P+ R++ PG HG RR + S FG+QL KQK++ Sbjct: 1 MSRYTGPRLKVMRALGAELPGLSRKPLGERNHPPGQHG-RRPRRKSGFGVQLIEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+ + +F+EA R RG T L+ LE RLD V+RA F PT AARQ V H+H Sbjct: 60 NYG-LGEKQIQRLFREAKRDRGPTGDKLLELLERRLDNFVFRAGFAPTAVAARQLVRHKH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VL+NGR+VNI S R + GD I++ ++++ + V+EA PE++ + VAT Sbjct: 119 VLLNGRAVNIPSIRIRPGDRIQLTERARCIPVVVEALAEPALTRPEWLVFDEAAFVATMT 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204 R PS +VP+PV + VVE+Y Sbjct: 179 RTPS-PDEVPFPVDV--QQVVEYY 199 >gi|294337150|emb|CAQ52725.1| ribosomal protein S4 [Homalia glabella] Length = 202 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ +P +++ + Sbjct: 117 ILVNDCMVDIPSYRCKPQDFITIKDQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQILDRG---SIGLKINELLVVEYYSR 200 >gi|282883330|ref|ZP_06291924.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B] gi|300813858|ref|ZP_07094163.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281296834|gb|EFA89336.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B] gi|300512045|gb|EFK39240.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 198 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59 M+K + K+ RR+G N+ G PK+ G R K + +G QL KQ+++ Sbjct: 1 MAKMMGPRFKLSRRLGLNVCGHPKAMKRA------QRGSARSDKKLTEYGKQLLEKQRLR 54 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG + EK+F+++F EA +++G T NL+SFLE RLD + YR F +I ARQ V H Sbjct: 55 AYYG-LLEKQFKNLFIEAQKAKGQTGPNLVSFLERRLDNLCYRLGFASSIRQARQMVLHG 113 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LVNG+ V+I SYRC D I + +K K++ E Y+S N D Sbjct: 114 HILVNGKKVDIPSYRCDVSDEISLSRKGKKVELFKENFNTNFPVSYPYLSKNED-FKGKL 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P+ P+ ++ L+VE+YS+ Sbjct: 173 VSLPNR---EDIPIEIEDQLIVEYYSK 196 >gi|6002019|emb|CAA58915.1| ribosomal protein S4 [Aechmea dealbata] Length = 196 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYEHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K + A +++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDNQGSKGLIQNYIASSAHKELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|6002047|emb|CAA58933.1| ribosomal protein S4 [Eichhornia crassipes] Length = 196 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSVSDLKNQLRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPPARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K A + + ++ ++P +++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDKQGSKALIQNSIAVSSQEELPFHLTFDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|67035566|gb|AAY62714.1| small ribosomal protein subunit 4 [Symblepharis lindigii] Length = 199 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 NDHIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|63145902|gb|AAY33889.1| small ribosomal protein 4 [Jensenia decipiens] Length = 202 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G L G + +RS K S + ++L KQK++ Sbjct: 1 MSRYRGPRAKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +L+N VNI SY CK DVI +K + + + + + L E+ +P +++ + + Sbjct: 117 ILINDDIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWISLKINELLVVEYYSR 200 >gi|294337130|emb|CAQ52715.1| ribosomal protein S4 [Haplohymenium longinerve] Length = 202 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + + +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQXXKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|299830416|ref|YP_003734631.1| ribosomal protein S4 [Kryptoperidinium foliaceum] gi|297385118|gb|ADI40416.1| ribosomal protein S4 [Kryptoperidinium foliaceum] Length = 204 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K KI RR+G K G + K + +G++L KQK+K Sbjct: 1 MSRYRGPKLKISRRLGTLPGLTTKKSKKLNRPGKDGNSPDMNKKLTEYGIRLEEKQKLKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SE + KEA R +G T L+ LE RLDT+ + F +I ARQ VNH H Sbjct: 61 NYG-LSESQLFRYVKEARRRKGVTGLILLQLLEMRLDTLCFNLGFASSIAQARQLVNHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN + +NI S++C+ D+I VK+KS V + +R D+P + + +++ AT Sbjct: 120 ITVNNKVINIPSFQCRLKDIISVKEKSTSKNLVTTNLKNNQRNDLPSNLKFDANSLTATV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + P+ + LV+E YSR Sbjct: 180 LDYCNR---EDIPLQLDELLVIEHYSR 203 >gi|48527381|gb|AAT45823.1| small ribosomal protein 4 [Plagiochila heterophylla] Length = 200 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLESNY-----IDRSTSNKKVSQYRIRLEEKQKLRF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 56 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P ++ + + + Sbjct: 115 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 175 NQMINR---EWINLKINELLVVEYYSR 198 >gi|6002087|emb|CAA58953.1| ribosomal protein S4 [Tradescantia virginiana] Length = 196 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKKPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNH+H Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHKH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + L+ ++P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSISLSPHEELPKHLTFDSFQHKGFV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 + S + + LVVE+ Sbjct: 176 NQTIDSK---WIGLKINELLVVEY 196 >gi|294337118|emb|CAQ52709.1| ribosomal protein S4 [Giraldiella levieri] Length = 202 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A + +G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|26399102|sp|P59141|RR4_HYPAR RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504365|emb|CAC81026.1| small ribosomal protein 4 [Hypopterygium arbuscula] Length = 202 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDYVVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|67035574|gb|AAY62718.1| small ribosomal protein subunit 4 [Oreoweisia laxifolia] Length = 199 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|6002039|emb|CAA58927.1| ribosomal protein S4 [Costus lucanusianus] Length = 196 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRP----RSGSDLKNQLHSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + L ++P++++ + Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIALCPHEELPKHLTFDSFQYKGVV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|11466789|ref|NP_039385.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|50233973|ref|YP_052751.1| ribosomal protein S4 [Oryza nivara] gi|109156597|ref|YP_654216.1| ribosomal protein S4 [Oryza sativa Indica Group] gi|62287252|sp|Q6ENH2|RR4_ORYNI RecName: Full=30S ribosomal protein S4, chloroplastic gi|148840862|sp|P0C486|RR4_ORYSA RecName: Full=30S ribosomal protein S4, chloroplastic gi|148840865|sp|P0C487|RR4_ORYSI RecName: Full=30S ribosomal protein S4, chloroplastic gi|148840866|sp|P0C488|RR4_ORYSJ RecName: Full=30S ribosomal protein S4, chloroplastic gi|20146759|gb|AAM12495.1|AC074232_22 ribosomal protein S4 [Oryza sativa Japonica Group] gi|11986|emb|CAA33998.1| unnamed protein product [Oryza sativa Japonica Group] gi|42795489|gb|AAS46056.1| ribosomal protein S4 [Oryza sativa Indica Group] gi|42795556|gb|AAS46122.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|42795620|gb|AAS46185.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|49614997|dbj|BAD26780.1| ribosomal protein S4 [Oryza nivara] gi|290790575|gb|ADD62835.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|290790644|gb|ADD62903.1| ribosomal protein S4 [Oryza meridionalis] gi|226607|prf||1603356AD ribosomal protein S4 Length = 201 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199 >gi|294337070|emb|CAQ52685.1| ribosomal protein S4 [Anomodon giraldii] Length = 202 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541122|gb|AEB21785.1| ribosomal protein S4 [Acromastigum cunninghamii] Length = 198 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K+ RR+G K+ + S+ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKVIRRLGALPGLTGKTLKSKSSH---NDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH H+ +N Sbjct: 57 LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNIVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSIDQTI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWINLKINELLVVEYYSR 196 >gi|77862539|gb|ABB04542.1| small ribosomal protein 4 [Marchantia paleacea] Length = 201 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKLKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N +V+I SY CK DVI +K +SK + +++ ++ +P +++ + + Sbjct: 117 LINNNTVDIPSYNCKPKDVITIKDRSKSQSIIIKNLNSFQKQKIPNHLTFDLMQIKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|139438877|ref|ZP_01772337.1| Hypothetical protein COLAER_01341 [Collinsella aerofaciens ATCC 25986] gi|133775588|gb|EBA39408.1| Hypothetical protein COLAER_01341 [Collinsella aerofaciens ATCC 25986] Length = 198 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++G + S + +R+ K S +G+QLR KQK+K Sbjct: 1 MAIDRTPVLKRCRQLGIDPAELGYSSKKE-----SIRQPKRRRKESEYGMQLREKQKVKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F F +A + G T NL+ LESRLD +V+R F T ARQ V H H Sbjct: 56 IYGVL-EKQFHGYFNKARKMNGVTGENLMIILESRLDNVVFRLGFARTRKEARQSVRHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I SYR K GDV+ V +K + L + EA +ER +VP ++ V+ + + Sbjct: 115 FTVNGKRVDIPSYRVKAGDVVAVGEKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGNV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ + + L+VE YS+ Sbjct: 175 LALPTREQ---ISGDINEQLIVELYSK 198 >gi|295136984|ref|YP_003587530.1| ribosomal protein S4 [Pisum sativum] gi|293338556|gb|ADE43529.1| ribosomal protein S4 [Pisum sativum] Length = 197 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 13/207 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G R P Q R SK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLT-------RKELPVGSEQSRSSKKSQYRIRLEEKQKLRF 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 54 HYG-LTERQLLKYVRIAGKAKGSTGEVLLQLLEMRLDNILFRLGMAATIPQARQLVNHRH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNGR V+I SYRCK D+I K K + + + A R +P ++ + Sbjct: 113 VLVNGRIVDIPSYRCKPEDIITAKDDKKSRTLIQNSLESAPRKQLPTHLIL-PFQYKGLV 171 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 172 KQIIDSK---WVGLEINELLVVEYYSR 195 >gi|59803303|gb|AAX07760.1| Rps4 [Lunularia cruciata] Length = 202 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + KI RR+G K+ + Y ++ K S + ++L KQK++ Sbjct: 1 MSXYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI A Q VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLXLLEMRLDNIIFRLGMAPTIPGAGQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +L+N +V+I Y CK DVI +K + K + + + ++ +P ++S + Sbjct: 117 ILINDNTVDIPXYNCKPKDVITIKNRQKSQSIITKNLTSFQKQKIPNHLSFDLIQFQGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWIYLKINELLVVEYYSR 200 >gi|294337275|emb|CAQ52786.1| ribosomal protein S4 [Thamnobryum maderense] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNH H Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|140083433|gb|ABO84828.1| ribosomal protein S4 [Anacolia webbii] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G +P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNXTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D I +K + K A + + ++ +P +++ N Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|41323121|gb|AAR99790.1| small ribosomal protein 4 [Plagiochila orbicularis] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R+G K+ + Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIPRLGAFPGLTGKTLKSKSRY---INRATPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIAKKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200 >gi|118430390|ref|YP_874655.1| ribosomal protein S4 [Hordeum vulgare subsp. vulgare] gi|152060552|sp|A1E9J3|RR4_HORVU RecName: Full=30S ribosomal protein S4, chloroplastic gi|118201044|gb|ABK79415.1| ribosomal protein S4 [Hordeum vulgare subsp. vulgare] Length = 201 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P +++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPSHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199 >gi|26399112|sp|P59146|RR4_LEUSC RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504367|emb|CAC80644.1| small ribosomal protein 4 [Leucodon sciuroides] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN VNI SYRCK D I +K + K A + + + + +P +++ + Sbjct: 117 ILVNDCIVNIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQNSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|11467194|ref|NP_043027.1| ribosomal protein S4 [Zea mays] gi|48478773|ref|YP_024381.1| ribosomal protein S4 [Saccharum hybrid cultivar SP-80-3280] gi|50812530|ref|YP_054633.1| ribosomal protein S4 [Saccharum officinarum] gi|118614494|ref|YP_899409.1| ribosomal protein S4 [Sorghum bicolor] gi|133955|sp|P02355|RR4_MAIZE RecName: Full=30S ribosomal protein S4, chloroplastic; AltName: Full=Basic protein gi|52783337|sp|Q6L397|RR4_SACHY RecName: Full=30S ribosomal protein S4, chloroplastic gi|62287254|sp|Q6ENW1|RR4_SACOF RecName: Full=30S ribosomal protein S4, chloroplastic gi|125987753|sp|A1E9S6|RR4_SORBI RecName: Full=30S ribosomal protein S4, chloroplastic gi|12412|emb|CAA25754.1| unnamed protein product [Zea mays] gi|902224|emb|CAA60288.1| ribosomal protein S4 [Zea mays] gi|48478675|gb|AAT44695.1| ribosomal protein S4 [Saccharum hybrid cultivar SP80-3280] gi|49659514|dbj|BAD27295.1| ribosomal protein S4 [Saccharum hybrid cultivar NCo 310] gi|118201128|gb|ABK79498.1| ribosomal protein S4 [Sorghum bicolor] Length = 201 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V ++ +P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199 >gi|294337096|emb|CAQ52698.1| ribosomal protein S4 [Cryphaea amurensis] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337267|emb|CAQ52782.1| ribosomal protein S4 [Taiwanobryum robustum] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D+I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|157689548|gb|ABV65330.1| ribosomal protein S4 [Quillaja saponaria] Length = 197 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 9/203 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K RR+G K P G L Q R K S + ++L KQK++ +YG Sbjct: 1 RGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 GR V+I SYRCK D+I + + K A + + R ++P+++++ +I Sbjct: 116 GRIVDIPSYRCKPQDIITARDEQKSRALIQNYLDSSPREELPKHLTLPPFQYKGLVNQII 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 DSK---WVGLKINELLVVEYYSR 195 >gi|86438896|emb|CAJ55412.1| small ribosomal protein 4 [Plagiochila gigantea] Length = 196 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ + SY + K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ Sbjct: 58 G-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHIS 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + + Sbjct: 117 INNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFY 204 + + + + LVVE+Y Sbjct: 177 MINR---EWINLKINELLVVEYY 196 >gi|59803299|gb|AAX07758.1| Rps4 [Haplomitrium gibbsiae] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P + G K S + ++L KQK++ Sbjct: 1 MSRXRGPRSKIIRRLGSLPGLTNKAP---KPRPGGTDQSIANKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNVISRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +L+N ++V+I S C+ GD+I V+ ++ + E + ++R P +++++ + Sbjct: 117 ILLNDKTVDIPSCNCEPGDIITVRDRAGSRPVIAEGTDPSQRSRTPNHLNLDSARNMGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWISLKINELLVVEYYSR 200 >gi|237688560|ref|YP_002905178.1| ribosomal protein S4 [Pinus contorta] gi|226875388|gb|ACO89126.1| ribosomal protein S4 [Pinus contorta] Length = 201 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRXXXXXXXQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|294337100|emb|CAQ52700.1| ribosomal protein S4 [Dacryophyllum falcifolium] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLDKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337271|emb|CAQ52784.1| ribosomal protein S4 [Taxiphyllum aomoriense] Length = 202 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P SY ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGILPGLTNKTPQLKSSY---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|145408427|ref|NP_817246.2| ribosomal protein S4 [Pinus koraiensis] gi|324986396|ref|YP_004276268.1| ribosomal protein S4 [Pinus lambertiana] gi|148887422|sp|Q85WX8|RR4_PINKO RecName: Full=30S ribosomal protein S4, chloroplastic gi|145048679|gb|AAO74091.2| ribosomal protein S4 [Pinus koraiensis] gi|228016152|gb|ACP50989.1| ribosomal protein S4 [Pinus sibirica] gi|228016790|gb|ACP51617.1| ribosomal protein S4 [Pinus armandii] gi|228017160|gb|ACP51981.1| ribosomal protein S4 [Pinus cembra] gi|323514245|gb|ADX89792.1| ribosomal protein S4 [Pinus lambertiana] Length = 203 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + RK S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 59 HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201 >gi|77862545|gb|ABB04545.1| small ribosomal protein 4 [Neohodgsonia mirabilis] Length = 201 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N +V+I SY CK DVI +K + K + V + ++ +P +++ + Sbjct: 117 LINDNTVDIPSYNCKPKDVITIKNRQKSQSIVTKNLNSFQKQKIPNHLNFDLIQFKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|228016979|gb|ACP51803.1| ribosomal protein S4 [Pinus banksiana] Length = 201 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRPSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|67035576|gb|AAY62719.1| small ribosomal protein subunit 4 [Eucamptodon perichaetialis] Length = 199 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R +NI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NDRIINIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKIPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|328541114|gb|AEB21781.1| ribosomal protein S4 [Acromastigum mooreanum] gi|328541116|gb|AEB21782.1| ribosomal protein S4 [Acromastigum sp. 'furcatifolium'] Length = 199 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ + SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTSKTLKSKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NKNIVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDLIKLYGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + L+VE+YSR Sbjct: 177 INR---ESIDLKINELLIVEYYSR 197 >gi|228017043|gb|ACP51866.1| ribosomal protein S4 [Pinus canariensis] Length = 201 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + +N V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRINDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|237688629|ref|YP_002905246.1| ribosomal protein S4 [Pinus gerardiana] gi|226876089|gb|ACO89345.1| ribosomal protein S4 [Pinus gerardiana] gi|228016279|gb|ACP51114.1| ribosomal protein S4 [Pinus strobus] gi|228016915|gb|ACP51740.1| ribosomal protein S4 [Pinus ayacahuite] gi|228017283|gb|ACP52102.1| ribosomal protein S4 [Pinus flexilis] gi|228017348|gb|ACP52166.1| ribosomal protein S4 [Pinus lambertiana] gi|228017542|gb|ACP52357.1| ribosomal protein S4 [Pinus monticola] gi|228017604|gb|ACP52418.1| ribosomal protein S4 [Pinus parviflora var. pentaphylla] gi|228017668|gb|ACP52481.1| ribosomal protein S4 [Pinus peuce] Length = 203 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + RK S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 59 HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201 >gi|294337164|emb|CAQ52732.1| ribosomal protein S4 [Homaliodendron exiguum] gi|294337166|emb|CAQ52733.1| ribosomal protein S4 [Homaliodendron microdendron] gi|294337220|emb|CAQ52759.1| ribosomal protein S4 [Neckeropsis calcicola] gi|294337222|emb|CAQ52760.1| ribosomal protein S4 [Neckeropsis calcutensis] Length = 202 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|308177512|ref|YP_003916918.1| 30S ribosomal protein S20 [Arthrobacter arilaitensis Re117] gi|307744975|emb|CBT75947.1| 30S ribosomal protein S20 [Arthrobacter arilaitensis Re117] Length = 207 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 11/209 (5%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++R ++ R +G L + + + R YGPG HG+ RK + S + ++LR KQ+++ Sbjct: 6 ARRT---VRLSRALGLALTPKAEKYMERRPYGPGQHGRARKKQDSDYAVRLREKQRLRAQ 62 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG I E + S FKEA R G+T NL++ LESRLD +V RA F TI ARQ V HRH+ Sbjct: 63 YG-IREAQMLSAFKEAKRLGGETGGNLLALLESRLDALVLRAGFARTIQQARQMVVHRHI 121 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVA 177 LVNG+ V+ S++ + G +I V +KS+++ A+ V P Y+ V + + A Sbjct: 122 LVNGQRVDRPSFKVQPGQLIHVHEKSEKMVPFQMAAAGEHSKVLPAAPAYLDVKLEALQA 181 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 TF+R P + PV + NLVVE+Y+R Sbjct: 182 TFLRAPERAE---IPVTCEENLVVEYYAR 207 >gi|6002043|emb|CAA58931.1| ribosomal protein S4 [Dioscorea balcanica] Length = 196 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDFKNQSRFGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTEQQLLRYVHIAGKAKGSTDQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSIESSPHEELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---FIGLKINELLVVEY 196 >gi|324986539|ref|YP_004276409.1| ribosomal protein S4 [Pinus nelsonii] gi|323522727|gb|ADX94975.1| ribosomal protein S4 [Pinus nelsonii] Length = 201 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DV+ ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVLTIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|294337254|emb|CAQ52776.1| ribosomal protein S4 [Pseudotaxiphyllum fauriei] Length = 202 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPKDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|197131484|gb|ACH47260.1| ribosomal protein S4 [Geranium macrorrhizum] Length = 199 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K R+G K P + P SK + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKICRLGALPGLTTKRPPDKSKSNP------PFSKKKEYQIRLKEKQKLRF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ +NHRH Sbjct: 55 HYG-LTERQLLKYVRIAGKAKGPTGPVLLQLLEMRLDNTLFRLGMASTIPQARQLINHRH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I ++K K + + +P +++++ Sbjct: 114 ILVNGRMVDIPSYRCKPRDIITAREKEKSRTLIQNYLDSPPHEKLPYHLTIDPLQYKGLV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LVVE+YSR Sbjct: 174 NQIIARG---WVGLKIKELLVVEYYSR 197 >gi|6002073|emb|CAA58945.1| ribosomal protein S4 [Potamogeton crispus] Length = 196 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGNDPKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR VNI SYRCK D+I K + A V + R ++P++++V+ Sbjct: 116 ILVNGRIVNIPSYRCKPRDIITTKDNQRSKALVQNYIDSSSREELPQHLTVDSSQYKGFV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---SVGLKINELLVVEY 196 >gi|294337208|emb|CAQ52753.1| ribosomal protein S4 [Miyabea fruticella] gi|294337210|emb|CAQ52754.1| ribosomal protein S4 [Miyabea rotundifolia] Length = 202 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|26399182|sp|Q9FTC7|RR4_ANTPU RecName: Full=30S ribosomal protein S4, chloroplastic gi|9971065|emb|CAC07204.1| small ribosomal protein 4 [Anthoceros punctatus] Length = 202 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSKLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ VP +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQPKSETMISKNIELYQKSKVPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|77862515|gb|ABB04530.1| small ribosomal protein 4 [Athalamia pinguis] Length = 201 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKFGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD IV+R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N V+I SY CK DVI +K + K + + + ++ +P +++ + + Sbjct: 117 LINNNIVDIPSYNCKPKDVISIKDRPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|294337277|emb|CAQ52787.1| ribosomal protein S4 [Thamnobryum subserratum] Length = 202 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|317125841|ref|YP_004099953.1| 30S ribosomal protein S4P [Intrasporangium calvum DSM 43043] gi|315589929|gb|ADU49226.1| SSU ribosomal protein S4P [Intrasporangium calvum DSM 43043] Length = 202 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G K+ R + PG HG+RR + Y QL+ KQ+ + Sbjct: 1 MARYTGPITKKSRRLKMDLVGGDKN-FELRPFPPGQHGRRRIQEKEYL-TQLQEKQRARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F +KEA R G T NL+ LESRLD +VYRA T ARQ V H H Sbjct: 59 AYG-VMEKQFVRYYKEAARRPGKTGENLLQILESRLDNVVYRAGLARTRRHARQLVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG V++ SYR ++ DV+ V+++S + A Q +R P ++ V ++ Sbjct: 118 FEVNGVRVDVPSYRVEQFDVVTVRKQSVETFPFELARQTFGDRTPPAWMHVVPGSLQILI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + + L+VE YS+ Sbjct: 178 HQLPVRAQ---IDSQLTEQLIVELYSK 201 >gi|294337138|emb|CAQ52719.1| ribosomal protein S4 [Heterocladium dimorphum] Length = 202 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E+RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPETRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIASYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + LVVE+YSR Sbjct: 177 NQI---LDRESIGSKINELLVVEYYSR 200 >gi|26399092|sp|P59135|RR4_BRYCA RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504373|emb|CAC80631.1| small ribosomal protein 4 [Rosulabryum capillare] Length = 202 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGVLPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R VNI SYRCK D I +K + K A + + L ++ P +++ N Sbjct: 117 ILVNDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 TQI---LDRESIGLKINELLVVEYYSR 200 >gi|228016727|gb|ACP51555.1| ribosomal protein S4 [Pinus aristata] Length = 201 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNMDLFQRDKLPNHLTFHPLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|294337240|emb|CAQ52769.1| ribosomal protein S4 [Porotrichodendron superbum] Length = 202 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ + +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKISNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541170|gb|AEB21809.1| ribosomal protein S4 [Telaranea plumulosa] Length = 199 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTVKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCESGDLITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSIDQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWVNLKINELLVVEYYSR 197 >gi|11466426|ref|NP_038430.1| ribosomal protein S4 [Mesostigma viride] gi|14548249|sp|Q9MUN0|RR4_MESVI RecName: Full=30S ribosomal protein S4, chloroplastic gi|7259569|gb|AAF43870.1|AF166114_82 ribosomal protein S4 [Mesostigma viride] Length = 205 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R++G+ K N + + K+K S +G++L+ KQK+K Sbjct: 1 MSRYRGPRLKIVRKLGDLPGLTSKINKNLQLAEQNKGKKSTKTKLSQYGIRLQEKQKLKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ ++A +G T L+ +LE RLD V+R PTI ARQ VNH H Sbjct: 61 NYG-VTEKQLLLYIRKARTIKGSTGQMLLQYLEMRLDNTVFRLGLAPTIAGARQLVNHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 ++VN R V I SY+CK D++ ++ +K VL +P ++ + D + AT Sbjct: 120 IMVNNRIVTIPSYKCKPKDILSIRNNNKSRNLVLNNLASPSVSKIPNHLLLKKDTLTATV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I P+ + LVVE+YSR Sbjct: 180 NGIVERK---SIPLEINELLVVEYYSR 203 >gi|294337238|emb|CAQ52768.1| ribosomal protein S4 [Porotrichodendron robustum] Length = 202 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ + +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKISNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541030|gb|AEB21739.1| ribosomal protein S4 [Pseudocephalozia lepidozioides] Length = 199 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTGKAPKQKSGF---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE RLD + R PTI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMAPTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + L + +P +++ + + + +I Sbjct: 117 NKNIVDIPSYNCEPGDIITIRDKQKSQSVITRNINLFQNLKIPSHLTFDPIKLFGSINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|222103474|gb|ACM44266.1| small ribosomal protein subunit 4 [Rhytidium rugosum] gi|222103550|gb|ACM44304.1| small ribosomal protein subunit 4 [Rhytidium rugosum] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIDLKINELLVVEYYSR 200 >gi|6002059|emb|CAA58937.1| ribosomal protein S4 [Laurus nobilis] Length = 196 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K R +G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRCLGALPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I + + + A + + R D+ ++++ + Sbjct: 116 ILVNGRVVDIPSYRCKPRDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NQIIDIK---WIGLKINELLVVEY 196 >gi|330444034|ref|YP_004377020.1| 30S ribosomal protein S4 [Chlamydophila pecorum E58] gi|328807144|gb|AEB41317.1| ribosomal protein S4 [Chlamydophila pecorum E58] Length = 208 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 4/207 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K++I RR G N++GR ++P+ + + PG HG +RK K S +GLQL KQK+K Sbjct: 1 MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G I EK+ F+E ++GD + + E RLD +VYR F +IFAA+Q V H H Sbjct: 60 CFGMILEKQLVKAFREVV-NKGDVAKLFLERFECRLDNMVYRMGFARSIFAAQQLVAHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 VLVNG+ V+ S+ + G I +K+KSK+L SV +A + E +P YIS++ N Sbjct: 119 VLVNGKRVDRRSFFVRPGMQISLKEKSKRLQSVKDALEAKDESSLPSYISLDKANCKGEL 178 Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205 + P + + P+ + +V EF S Sbjct: 179 LLSPEQDQIEAQLPLPINVAVVCEFLS 205 >gi|60117193|ref|YP_209527.1| ribosomal protein S4 [Huperzia lucidula] gi|62287201|sp|Q5SD08|RR4_HUPLU RecName: Full=30S ribosomal protein S4, chloroplastic gi|50660001|gb|AAT80723.1| ribosomal protein S4 [Huperzia lucidula] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+GE K+P Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLGELPGLTRKTPKLKPDY---INKSTPNKKVSQYCIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 ++G ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH+H Sbjct: 58 HHG-LAEQQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R++N+ SYRCK D+I + + + A + + + ++ +P +++++ V Sbjct: 117 ILVNNRAINVPSYRCKPKDIITTRDRPESRARITKNYEFSQTYKIPNHLTLHSLQSVGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NKIVDR---ESIDLNINELLVVEYYSR 200 >gi|6002035|emb|CAA58925.1| ribosomal protein S4 [Cocos nucifera] Length = 196 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + + L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRICLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK +I K K + A + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRGIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|195984192|gb|ACG63786.1| rps4 [Costesia spongiosa] Length = 199 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPEARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + +++ VP +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLEINELLVVEYYSR 197 >gi|58584920|ref|YP_198493.1| 30S ribosomal protein S4 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497678|sp|Q5GRX3|RS4_WOLTR RecName: Full=30S ribosomal protein S4 gi|58419236|gb|AAW71251.1| Ribosomal protein S4 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 204 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 130/206 (63%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K++I RR+G NLWGR K PVN R Y PG G + S FG Q A +K K Sbjct: 1 MTTVINRKYRISRRLGINLWGRAKDPVNRRKYPPGQRGILGFKRLSDFGKQFAAHKKFKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY IS K+ R IF +A +G T+ N I LESRL +++Y + VPTI++A+Q ++H+H Sbjct: 61 YYA-ISSKQLRRIFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VN + VNI SYR K GD++++++++ ++ ++EA Q ER P+Y+ + ++ Sbjct: 120 VTVNDKIVNIPSYRVKPGDIVKIRERAAKIPVIVEAVQKQERKAPDYLEADSKEYSVKYL 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP +VPY M+ NLVVEFYSR Sbjct: 180 RIPQ-YSEVPYSADMEVNLVVEFYSR 204 >gi|67035630|gb|AAY62746.1| small ribosomal protein subunit 4 [Orthodicranum flagellare] Length = 200 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K A +++ +++ +P +++ + + Sbjct: 117 VNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 I---XDQESIGLKINELLVVEYYSR 198 >gi|222103478|gb|ACM44268.1| small ribosomal protein subunit 4 [Niphotrichum ericoides] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P + ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R VNI SYRCK D I +K + K A +++ +++ +P +++ N Sbjct: 117 ILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDHESIGLKINELLVVEYYSR 200 >gi|328541070|gb|AEB21759.1| ribosomal protein S4 [Zoopsis macrophylla] Length = 199 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTSKTLKLKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ E RLD + R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTILRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNDIVDIPSYNCEPGDIIMIRDKPKSQSMITKNINLFQNLKIPSHLAFDPIKLCGSVNQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 IDR---ESVNLKINELLVVEYYSR 197 >gi|294337263|emb|CAQ52780.1| ribosomal protein S4 [Pseudoscleropodium purum] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLNYSFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|197294230|ref|YP_001798771.1| 30S ribosomal protein S4 [Candidatus Phytoplasma australiense] gi|226699101|sp|B1V8Z1|RS4_PHYAS RecName: Full=30S ribosomal protein S4 gi|171853557|emb|CAM11423.1| 30S ribosomal protein S4 [Candidatus Phytoplasma australiense] Length = 198 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ S KI RR+ ++ K + R+Y PG HGQ R++K S +GLQL+ KQK++ Sbjct: 1 MSRYTGSTWKISRRLNYSITETGKE-LRKRAYAPGQHGQ-RRAKISDYGLQLKEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FR F+ A + +G + LESRLD IVYR F T ARQ VNH H Sbjct: 59 TYG-MSEKQFRKTFERASKLKGIHGEMFLVLLESRLDNIVYRLGFAKTRAQARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLV G+ V+I SY K G I +++KSK L V E + + +Y+S++ + +V Sbjct: 118 VLVEGKKVDIASYSLKPGQTITLREKSKNLKIVEEVLK-NKFVRADYVSLD-KQLNGKYV 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + + + L+VEFY+R Sbjct: 176 RYPKRNEFL---AEINEQLIVEFYNR 198 >gi|294337176|emb|CAQ52738.1| ribosomal protein S4 [Hylocomiastrum pyrenaicum] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + ++ +PE+++ + Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQRKSETIISKNIDFYQKYKIPEHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|67035596|gb|AAY62729.1| small ribosomal protein subunit 4 [Eustichia longirostris] Length = 199 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTDKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A V++ +++ VP +++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSRAMVIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197 >gi|307244571|ref|ZP_07526676.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678] gi|306492098|gb|EFM64146.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678] Length = 201 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 104/202 (51%), Gaps = 9/202 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 K K+ RR+G N+ G PK+ G R K + +G QL KQ+++ YYG Sbjct: 6 RGPKFKLSRRLGLNVCGHPKAM-----NRAGKGTARSDKKLTPYGQQLLEKQRLRAYYG- 59 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 +SEK+ R K+A +++ T +I+ LE RLD +VYR +I ARQ V+H ++ VN Sbjct: 60 VSEKQMRIYMKKAQKAKMTTGTAVITTLECRLDNLVYRMGLANSIRQARQMVSHGNIHVN 119 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184 GR V+I SY GD I +++K + + A Y++ + N A R+P Sbjct: 120 GRKVDIPSYIVSVGDEISLREKYRTNELFKANFEAAALSEYPYLTKDQANFSAVLTRLPE 179 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + P+ + LVVEFYS+ Sbjct: 180 REE---VPIEINDALVVEFYSK 198 >gi|294337246|emb|CAQ52772.1| ribosomal protein S4 [Porotrichum fruticosum] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|118626087|emb|CAL39347.1| small ribosomal protein 4 [Cephalozia crassifolia] Length = 202 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGVLPGLTSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N ++I SY C GD+I ++ K K + + L ++ +P + + + + + Sbjct: 117 ISMNNDMIDIPSYNCDPGDIITMRNKRKSELLITKNINLFQKLKMPSHSTFDPTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LV E+YSR Sbjct: 177 NQIVNR---EGVNLKINELLVAEYYSR 200 >gi|328541032|gb|AEB21740.1| ribosomal protein S4 [Pseudocephalozia paludicola] Length = 199 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K RR+G K+P + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKXIRRLGALPGLTGKAPKQKSGF---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE RLD + R PTI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMAPTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + L + +P +++ + ++ + +I Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSQSVITRNINLFQNSKIPSHLTFDPIKLLGSINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|77862537|gb|ABB04541.1| small ribosomal protein 4 [Marchantia chenopoda] Length = 201 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N V+I SY CK D+I +K + K + + + ++ +P +++ + + Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|294337224|emb|CAQ52761.1| ribosomal protein S4 [Neckeropsis nitidula] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPTHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337234|emb|CAQ52766.1| ribosomal protein S4 [Pinnatella minuta] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D+I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|260770937|ref|ZP_05879866.1| SSU ribosomal protein S4p (S9e) [Vibrio furnissii CIP 102972] gi|260614174|gb|EEX39364.1| SSU ribosomal protein S4p (S9e) [Vibrio furnissii CIP 102972] Length = 188 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 9/185 (4%) Query: 23 PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82 K ++ PG+HG RR Y G+QLR KQK+++ YG + EK+FR+ +KEA R +G Sbjct: 12 TKCKID---NAPGVHGARRGRLSEY-GVQLREKQKVRRIYGVL-EKQFRNYYKEAARLKG 66 Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 +T NL+ LE RLD +VYR F T ARQ V+H+ +LVNG+ VN+ S+ DV+ Sbjct: 67 NTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKAILVNGKVVNVPSFNVAANDVVA 126 Query: 143 VKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201 +++K+K+ + + A ++AE R+ P +I V+ +M TF R+P + L+V Sbjct: 127 IREKAKKQSRIKAALEVAEQREKPTWIEVDASSMEGTFKRLPERSD---LSADINEQLIV 183 Query: 202 EFYSR 206 E YS+ Sbjct: 184 ELYSK 188 >gi|222103448|gb|ACM44253.1| small ribosomal protein subunit 4 [Brachythecium salebrosum] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337090|emb|CAQ52695.1| ribosomal protein S4 [Calyptothecium recurvulum] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SY+CK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|48527419|gb|AAT45842.1| small ribosomal protein 4 [Plagiochila spinulosa] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNIHSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + ++ L VE+YSR Sbjct: 177 NQMINR---EWITLKIKELLDVEYYSR 200 >gi|228016658|gb|ACP51487.1| ribosomal protein S4 [Pinus albicaulis] Length = 203 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + RK S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 59 HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + +N V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 118 IRINDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201 >gi|66990662|emb|CAI29109.1| small ribosomal protein 4 [Plagiochila strictifolia] Length = 197 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 ++ + + + LVVE+ Sbjct: 177 NQMINR---EWINLKINELLVVEY 197 >gi|18311341|ref|NP_563275.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13] gi|168205188|ref|ZP_02631193.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987] gi|168213270|ref|ZP_02638895.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969] gi|168216676|ref|ZP_02642301.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239] gi|169347143|ref|ZP_02866085.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495] gi|182625776|ref|ZP_02953543.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721] gi|26399586|sp|Q8XHW7|RS4B_CLOPE RecName: Full=Putative 30S ribosomal protein S4 B gi|18146025|dbj|BAB82065.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13] gi|169296826|gb|EDS78955.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495] gi|170663264|gb|EDT15947.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987] gi|170715196|gb|EDT27378.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969] gi|177908932|gb|EDT71419.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721] gi|182381217|gb|EDT78696.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239] Length = 197 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N+ G PK+ G R K S +G+QL KQ+++ Sbjct: 1 MAKMMGPRFKMCRRLGLNVVGHPKAMKRA-----GRGTSRADKKLSDYGIQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + E++F +A S+ L+ LESRLD +VYR F +I ARQ VNH H Sbjct: 56 YYG-VMERQFTRYVDQAFNSKEQPGEALLMILESRLDNMVYRMGFASSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 LVNG+ VNI S+R GD + +++KS++ + + + Y+S DN F Sbjct: 115 FLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYVSKEEDNFKGIFT 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P+ +Q L+VEFYS+ Sbjct: 175 RKPKREE---IPITIQEQLIVEFYSK 197 >gi|327395480|dbj|BAK12902.1| 30S ribosomal protein S4 RpsD [Pantoea ananatis AJ13355] Length = 176 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 6/181 (3%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86 + PG HG RK + S +G QLR KQK+++ YG + E++FR+ +KEA R +G+T Sbjct: 1 MCKIEQAPGQHGA-RKPRLSDYGGQLREKQKVRRMYGVL-ERQFRNYYKEAARLKGNTGE 58 Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 NL++ LE RLD +VYR F T ARQ V+H+ VLVNGR VNI SY+ DV+ +++K Sbjct: 59 NLLALLEGRLDNVVYRMGFGATRAEARQLVSHKSVLVNGRVVNIASYQVSPNDVVSIREK 118 Query: 147 SKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 +K+ + V A +LAE R+ P ++ V+ M F RIP + +L+VE YS Sbjct: 119 AKKQSRVKAALELAEQREKPTWLEVDAAKMEGVFKRIPERTD---LSADINEHLIVELYS 175 Query: 206 R 206 + Sbjct: 176 K 176 >gi|118443601|ref|YP_878412.1| 30S ribosomal protein S4 [Clostridium novyi NT] gi|152060919|sp|A0Q1B0|RS4B_CLONN RecName: Full=30S ribosomal protein S4 B gi|118134057|gb|ABK61101.1| ribosomal protein S4 [Clostridium novyi NT] Length = 196 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ + R K S +G+QL KQK++ Sbjct: 1 MAKMRQPRFKLSRRLGVNIYGHPKAMKRAEGI------KSRGKKMSDYGIQLLEKQKVRA 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+FR ++A +S+ T L+ LE RLD +VYR F +I ARQ VNH H Sbjct: 55 YYG-VMEKQFRRYVEKAMKSKDVTGDALLKLLECRLDNLVYRIGFANSIRQARQMVNHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 +LVNG V+I SY K G+ + +K K ++ +L ++P YI ++DN Sbjct: 114 ILVNGSKVDIPSYEVKVGEEVTLKDKYRKNEMFSNNFLELRTFELP-YIEKDYDNFTGKL 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +RIP+ + P+ + VVE YS+ Sbjct: 173 IRIPNREE---IPIEVNEVAVVELYSK 196 >gi|67035648|gb|AAY62755.1| small ribosomal protein subunit 4 [Venturiella sinensis] Length = 199 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGILPGLTHKTPQLKSNS---INQSTSSKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ V+H+H+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVSHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K +L+ +++ VP +++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSQVIILKNVDFSQKFKVPNHLTFNSLEKKGIVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESVGLKINELLVVEYYSR 197 >gi|26399094|sp|P59136|RR4_CANTA RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504379|emb|CAC80634.1| small ribosomal protein 4 [Canalohypopterygium tamariscinum] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D I +K + K A + + + +P ++ N + Sbjct: 117 ILVNGHIVDIPSYRCKPQDFITIKNQRKSQAIINKNMNFYRKYKIPNHLIYNSLDKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|118430304|ref|YP_874738.1| ribosomal protein S4 [Agrostis stolonifera] gi|125987750|sp|A1EA10|RR4_AGRST RecName: Full=30S ribosomal protein S4, chloroplastic gi|118201213|gb|ABK79582.1| ribosomal protein S4 [Agrostis stolonifera] Length = 201 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199 >gi|290790850|gb|ADD63106.1| ribosomal protein S4 [Microlaena stipoides] Length = 201 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNIIFRLGMASTIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199 >gi|271964887|ref|YP_003339083.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021] gi|270508062|gb|ACZ86340.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021] Length = 204 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKY 61 + K ++ RR G L + R Y PG HG++ + + +GL+L KQK++ Y Sbjct: 2 RYTGPKVRLSRRAGVPLTRKAVRYFEERPYPPGEHGRKTNRRQTGDYGLRLMEKQKLRWY 61 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 Y +SE++ R + A RS G + L+ LESRL ++V RA P+I+AARQ+V H H+ Sbjct: 62 YD-VSERQMRRYWDMALRSTGRSGAELVVLLESRLASLVLRAGLAPSIYAARQYVTHGHI 120 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATF 179 V+GR V+I SY K G VI V+Q+S+ + + A++ A+ + Y+SV+H ++ T Sbjct: 121 TVDGRKVDIPSYLVKPGQVIAVRQRSRAMQPFVAAAEGTYADDRIAPYLSVDHADLRFTV 180 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P+ + V V + LVVEFYSR Sbjct: 181 VGRPAREQIV---VPVDEQLVVEFYSR 204 >gi|294337248|emb|CAQ52773.1| ribosomal protein S4 [Porotrichum substriatum] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337232|emb|CAQ52765.1| ribosomal protein S4 [Pinnatella alopecuroides] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D+I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|222103554|gb|ACM44306.1| small ribosomal protein subunit 4 [Marsupella commutata] Length = 198 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ + +Y + K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN Sbjct: 57 LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + Sbjct: 117 NDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTV 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWVNLKINELLVVEYYSR 196 >gi|260655137|ref|ZP_05860625.1| ribosomal protein S4 [Jonquetella anthropi E3_33 E1] gi|260630059|gb|EEX48253.1| ribosomal protein S4 [Jonquetella anthropi E3_33 E1] Length = 206 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 115/208 (55%), Gaps = 10/208 (4%) Query: 2 SKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 +++ + K KI RR+G N++G K ++ ++ PG RR K S +GLQL+ KQK++ Sbjct: 6 TRKTAPKGKIVRRLGANIFGNQKYDKLLSRKATPPGG-QPRRHGKQSIYGLQLQEKQKIR 64 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++ ++ A + G T N++ LESRLD +VYR F T ARQ V H Sbjct: 65 FSYG-VSERQLHKVYTLAKKMEGVTGSNMLILLESRLDNVVYRLGFCTTRPQARQLVCHG 123 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVAT 178 H VNGR V+I S R GDVI +++ SK + + E ++A P ++S+ T Sbjct: 124 HFAVNGRKVDIPSARVSAGDVISIRENSKDMKVLKENLEVASAVSQPAWLSL--SGTEGT 181 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R+P + V +VVE+Y++ Sbjct: 182 VLRLPERSEIVCLA---DEQVVVEYYAK 206 >gi|328541132|gb|AEB21790.1| ribosomal protein S4 [Telaranea heterotexta] Length = 200 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GDVI +K K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCELGDVITIKDKQKSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|294337158|emb|CAQ52729.1| ribosomal protein S4 [Homalia webbiana] gi|294337160|emb|CAQ52730.1| ribosomal protein S4 [Homalia webbiana] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LV+ V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVDDCIVDIPSYRCKPQDFITIKNQRKSETMISKNIEFYQKFKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337140|emb|CAQ52720.1| ribosomal protein S4 [Heterocladium heteropterum] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRPDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ VP++++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKVPDHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337082|emb|CAQ52691.1| ribosomal protein S4 [Brachythecium rivulare] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|77862553|gb|ABB04549.1| small ribosomal protein 4 [Riccia fluitans] Length = 201 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTFKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHQHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N +V+I SY CK D+I +K + K + + + ++ +P +++ + Sbjct: 117 LINNNTVDIPSYNCKPKDIITIKDRQKSQSIITKNLTFFQKQKIPNHLTFDLIQFKGLIN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIVDR---ECIYLKINELLVVEYYSR 199 >gi|67035728|gb|AAY62795.1| small ribosomal protein subunit 4 [Funariella curviseta] Length = 196 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K P S Q K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGVLPGLTNKIPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-I 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN Sbjct: 56 TERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVND 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I VK + K A + + +++ VP +++ N +I Sbjct: 116 CIVDIPSYRCKPDDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFNSTQKKGLVNQI-- 173 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 -LDRESIGLKINELLVVEYYSR 194 >gi|228016343|gb|ACP51177.1| ribosomal protein S4 [Pinus taeda] Length = 201 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK+ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLHF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|6002045|emb|CAA58932.1| ribosomal protein S4 [Dioscorea polystachya] Length = 196 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDFKNQSRFGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 HYG-LTEQQLLRYIHIAGKAKGSTDQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + + + + + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKVLIQNSIESSPHEELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---LIGLKINELLVVEY 196 >gi|73748343|ref|YP_307582.1| 30S ribosomal protein S4 [Dehalococcoides sp. CBDB1] gi|289432391|ref|YP_003462264.1| ribosomal protein S4 [Dehalococcoides sp. GT] gi|90101688|sp|Q3ZZP7|RS4_DEHSC RecName: Full=30S ribosomal protein S4 gi|73660059|emb|CAI82666.1| ribosomal protein S4 [Dehalococcoides sp. CBDB1] gi|288946111|gb|ADC73808.1| ribosomal protein S4 [Dehalococcoides sp. GT] Length = 207 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54 MS+ + ++ RR G+ L+ + K R PG G+ R+ S G QLR Sbjct: 1 MSRETGAVCRMCRRSGDKLFLKGDKCVTKCVFEKRPKPPGPQLGRPRR--LSDRGQQLRQ 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ ++ YG ++E++FR F A+ G T N++ LE RLD +++R F + ARQ Sbjct: 59 KQSIRWSYG-MTERQFRRFFGLANAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+LVNG+ +I SY KEG I V++ SK A ++ E + +P ++S++ Sbjct: 118 IVMHGHILVNGQKTDIPSYLIKEGQEITVRETSKATAYFKTLAENIEAKAIPGWLSLDRK 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P++ VVE+YSR Sbjct: 178 TLSGKVISLPNAGD---IDARFDAQTVVEYYSR 207 >gi|328541100|gb|AEB21774.1| ribosomal protein S4 [Bazzania involuta] Length = 197 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ S+ K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N Sbjct: 57 TERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|294337216|emb|CAQ52757.1| ribosomal protein S4 [Neckera remota] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337144|emb|CAQ52722.1| ribosomal protein S4 [Heterocladium procurrens] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIASYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + LVVE+YSR Sbjct: 177 NQI---LDRESIGSKINELLVVEYYSR 200 >gi|67036092|gb|AAY62972.1| small ribosomal protein subunit 4 [Cyrto-hypnum schistocalyx] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVRIIRRLGTLPGLTTKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337236|emb|CAQ52767.1| ribosomal protein S4 [Pinnatella mucronata] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T + E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVSLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D+I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|222103446|gb|ACM44252.1| small ribosomal protein subunit 4 [Pleurozium schreberi] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L LE RLD +++R PTI ARQ VNH H Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|26399101|sp|P59140|RR4_HYLSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504353|emb|CAC80756.1| small ribosomal protein 4 [Hylocomium splendens] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337086|emb|CAQ52693.1| ribosomal protein S4 [Callicostella cf. africana Rikkinen et al. 21] Length = 202 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + + ++ +P +++ N Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQILDRD---SIGLKINELLVVEYYSR 200 >gi|51210012|ref|YP_063676.1| ribosomal protein S4 [Gracilaria tenuistipitata var. liui] gi|62287237|sp|Q6B8N4|RR4_GRATL RecName: Full=30S ribosomal protein S4, chloroplastic gi|50657766|gb|AAT79751.1| 30S ribosomal protein S4 [Gracilaria tenuistipitata var. liui] Length = 201 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ K ++ + G HGQ+ + KPS + L+L KQK++ Sbjct: 1 MSRYRGPRLRISRRLGDLPGLTRK--ISKKLSPAGEHGQQLR-KPSEYSLRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ K A + G T L+ LE RLD +++R PT+ AARQ VNH H Sbjct: 58 NYG-LSEKQLSKYIKIAKKVTGSTGLILLQILEMRLDNVIFRLGLSPTLPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+N + V+I SY+CK GD+I+V+ K V +P ++ +N + A Sbjct: 117 ILINKQKVSICSYQCKPGDIIDVQAKDSSQNLVKRYLSFPTLVGIPNHLELNTKTLNAKI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + M LVVE+YSR Sbjct: 177 NAIVER---ESVALQMNELLVVEYYSR 200 >gi|42520265|ref|NP_966180.1| 30S ribosomal protein S4 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225630200|ref|YP_002726991.1| ribosomal protein S4 [Wolbachia sp. wRi] gi|81652701|sp|Q73HZ8|RS4_WOLPM RecName: Full=30S ribosomal protein S4 gi|254764623|sp|C0R2Q8|RS4_WOLWR RecName: Full=30S ribosomal protein S4 gi|42410003|gb|AAS14114.1| ribosomal protein S4 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225592181|gb|ACN95200.1| ribosomal protein S4 [Wolbachia sp. wRi] Length = 204 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K++I RR+G NLWGR K PVN R Y PG HG K S FG Q A +K K Sbjct: 1 MTTVITRKYRISRRLGVNLWGRAKDPVNKRKYPPGQHGILGFKKLSDFGKQFAAHKKFKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY IS K+ R F +A +G T+ N I LESRL +++Y + VPTI++A+Q ++H+H Sbjct: 61 YYA-ISSKQLRRTFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VN + VNI SYR K GD+I++++++ ++ V+EA Q ER P+Y+ + ++ Sbjct: 120 VTVNDKVVNISSYRVKPGDIIKIRERAAKIPVVVEAEQKQERKAPDYLEADSKEHSVKYL 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P +VPY M+ NLVVEFYSR Sbjct: 180 RSPQ-YSEVPYSADMEVNLVVEFYSR 204 >gi|294337202|emb|CAQ52795.1| ribosomal protein S4 [Macrothamnium hylocomioides] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G ++P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNRTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ +E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLIEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|67035636|gb|AAY62749.1| small ribosomal protein subunit 4 [Sclerodontium pallidum] Length = 199 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K +++ + +++ VP +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|168335041|ref|ZP_02693154.1| 30S ribosomal protein S4 [Epulopiscium sp. 'N.t. morphotype B'] Length = 196 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 112/206 (54%), Gaps = 10/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ R +G N+ G PK+ + R K S +G+QL KQ+++ Sbjct: 1 MAKMMGPRFKMCRSLGVNVVGHPKAMDRAK-----QGTSRDARKLSEYGVQLLEKQRLRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F ++A R+ + +++ LE RLD IVYR F + ARQ VNH H Sbjct: 56 YYGVL-EKQFVRYVEKAFRAGSNPGPIILTSLEMRLDNIVYRMGFARSTRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 L+NG+ V+ SY KEGD I +K+KS++ E +P Y+ ++ DN+ T + Sbjct: 115 FLINGQKVDRPSYALKEGDTITLKEKSRESKIFAENMAGNNFALP-YLEMDIDNLTGTII 173 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + P+ + L++EFYSR Sbjct: 174 RKPTREE---LPIEINEQLIIEFYSR 196 >gi|294337168|emb|CAQ52734.1| ribosomal protein S4 [Homaliodendron piniforme] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + ++ ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNTEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|548874|sp|P36470|RR4_RHAHU RecName: Full=30S ribosomal protein S4, chloroplastic gi|439964|emb|CAA82454.1| ribosomal protein S4 [Rhapis humilis] Length = 196 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|294337178|emb|CAQ52739.1| ribosomal protein S4 [Hylocomiastrum umbratum] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + ++ +P++++ + Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITMKNQRKSETIISKNIDFYQKYKIPDHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|63145904|gb|AAY33890.1| small ribosomal protein 4 [Jensenia spinosa] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G L G + +RS K S + ++L KQK++ Sbjct: 1 MSRYRGPRAKIIRRLGT-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +L+N VNI SY CK DVI +K + + + + + L E+ +P +++ + + Sbjct: 117 ILINDDIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWIRLKINELLVVEYYSR 200 >gi|42560826|ref|NP_975277.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|331703280|ref|YP_004399967.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|61215585|sp|Q6MTW7|RS4_MYCMS RecName: Full=30S ribosomal protein S4 gi|42492322|emb|CAE76919.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|256384411|gb|ACU78981.1| ribosomal protein S4 [Mycoplasma mycoides subsp. capri str. GM12] gi|256385243|gb|ACU79812.1| ribosomal protein S4 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455723|gb|ADH21958.1| ribosomal protein S4 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|301321292|gb|ADK69935.1| ribosomal protein S4 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] gi|328801835|emb|CBW53988.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 208 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 MS+ S K RR G ++ K S R PG HG+ R K K S +G QL+ KQK Sbjct: 1 MSRFIGSTFKKSRRFGFSILETGKEFSKGKKRITTPGQHGKERAKVKVSEYGQQLQEKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +K YG +SE++FR+ F +A + +G N + LESRLD IVYR F T ARQ VN Sbjct: 61 VKFMYG-LSERQFRNTFAKAKKMQGILGTNFLVLLESRLDNIVYRLGFSATRQGARQLVN 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H H+LVNG+ V+I SY GD++EVK K+ VLEA Q E + E++ VN + + Sbjct: 120 HGHILVNGKKVDIPSYLLSVGDLVEVKASMKKNEKVLEALQNNEATL-EFVKVNKNEVKG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FVR+P + + +L+VE+Y+R Sbjct: 179 EFVRLPERTE---LSSEISESLIVEWYNR 204 >gi|294337242|emb|CAQ52770.1| ribosomal protein S4 [Porotrichum bigelovii] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ISVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + LVVE+YSR Sbjct: 177 NQI---LDRESIGSKINELLVVEYYSR 200 >gi|118625987|emb|CAL39315.1| small ribosomal protein 4 [Metzgeria decipiens] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRTKIIRRLGALPGLTSKTFKAKSSY---IDRPASNKKISQYRVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H Sbjct: 58 HYG-LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +K + + + ++E ++ +P ++ + ++ + Sbjct: 117 ISINKDIVDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ + + + LVVE+YSR Sbjct: 177 NRMINR---EWIDLKINELLVVEYYSR 200 >gi|257784936|ref|YP_003180153.1| 30S ribosomal protein S4 [Atopobium parvulum DSM 20469] gi|257473443|gb|ACV51562.1| ribosomal protein S4 [Atopobium parvulum DSM 20469] Length = 197 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++G + + + R +RR+ + S +G+QLR KQK K Sbjct: 1 MAIDRTPVLKRCRQLGIDPVVMGINKTSNREP------RRRRRQESEYGMQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E +F ++ A ++ G T NL+S LE+RLD +++R F T ARQ V H H Sbjct: 55 IYGVL-ENQFHGYYEMAKKNPGITGDNLMSILETRLDNVIFRLGFARTRKEARQTVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VNG+ V+I SYR K GDVI V K+K L + EA +E VP ++ V+ + + T Sbjct: 114 ITVNGQRVDIPSYRVKSGDVIAVASKAKDLLPIKEALISSEHMAVPAWLEVDIEKLQGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++P+ + + + L+VE YS+ Sbjct: 174 LQLPTRDQ---IDLEIDAQLIVELYSK 197 >gi|77862527|gb|ABB04536.1| small ribosomal protein 4 [Dumortiera hirsuta] Length = 201 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTSTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N +V+I SY CK DVI +K +SK + + + ++ +P +++ + + Sbjct: 117 LINNNTVDIPSYNCKPKDVITIKDRSKSQSIITKNLNSFQKQKIPNHLAFDLMQIKGIVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWISLKINELLVVEYYSR 199 >gi|328541042|gb|AEB21745.1| ribosomal protein S4 [Lembidium nutans] Length = 199 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE R D ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSQSVITKNINLFQNLKIPSHLTFDSIKLSGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197 >gi|294337279|emb|CAQ52788.1| ribosomal protein S4 [Thamnobryum tumidicaule] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLK---FSSINQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A R++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARRAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ +P +++ + Sbjct: 117 ILVNDCMVDIPSYRCKPQDFITIKDQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|222103516|gb|ACM44287.1| small ribosomal protein subunit 4 [Niphotrichum ericoides] Length = 203 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P + ++ K S + ++L KQK++ +Y Sbjct: 4 RYRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 60 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+L Sbjct: 61 G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHIL 119 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K A +++ +++ +P +++ N + Sbjct: 120 VNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQ 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 180 I---LDHESIGLKINELLVVEYYSR 201 >gi|270307867|ref|YP_003329925.1| ribosomal protein S4 [Dehalococcoides sp. VS] gi|270153759|gb|ACZ61597.1| ribosomal protein S4 [Dehalococcoides sp. VS] Length = 207 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54 MS+ + ++ RR G+ L+ + K R PG G+ R+ S G QLR Sbjct: 1 MSRETGAVCRMCRRSGDKLFLKGDKCVTKCVFEKRPKAPGPQLGRPRR--LSDRGQQLRQ 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ ++ YG ++E++FR F A+ G T N++ LE RLD +++R F + ARQ Sbjct: 59 KQSIRWSYG-MTERQFRRFFGLANAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+LVNG+ +I SY KEG VI V++ SK A ++ E + +P ++S++ Sbjct: 118 IVMHGHILVNGQKTDIPSYLIKEGQVITVRETSKATAYFKTLAENIEAKAIPGWLSLDRK 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P++ VVE+YSR Sbjct: 178 TLSGKVISLPAAGD---IDARFDAQTVVEYYSR 207 >gi|77019151|emb|CAH60181.1| chloroplast 30S ribosomal protein S4 [Dryptodon austrofunalis] Length = 199 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197 >gi|77862559|gb|ABB04552.1| small ribosomal protein 4 [Sauteria alpina] Length = 201 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKFGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N V+I SY CK DVI +K++S + + + ++ +P +++ + + Sbjct: 117 LINNNMVDIPSYNCKPKDVITIKERSNSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|294337112|emb|CAQ52706.1| ribosomal protein S4 [Entodon dregeanus] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDSIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|228016595|gb|ACP51425.1| ribosomal protein S4 [Abies firma] Length = 201 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE R D I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD+ P +++ N Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDILPNHLTFNSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|222103476|gb|ACM44267.1| small ribosomal protein subunit 4 [Codriophorus fascicularis] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P + ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K A +++ +++ +P +++ N + Sbjct: 119 VNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 179 I---LDHESIGLKINELLVVEYYSR 200 >gi|284988799|ref|YP_003407353.1| 30S ribosomal protein S4 [Geodermatophilus obscurus DSM 43160] gi|284062044|gb|ADB72982.1| ribosomal protein S4 [Geodermatophilus obscurus DSM 43160] Length = 200 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 111/200 (55%), Gaps = 5/200 (2%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K +I R +G L + R Y PG HG++R+ Y +LR KQ+++ Y IS Sbjct: 6 PKVRISRALGIPLTPKAVEYFERRPYPPGEHGRKRRKDSDY-STRLREKQRLRAQYD-IS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R+ F A R+ G T LI LESRLD V RA F T++ ARQFV H+HVLVNG+ Sbjct: 64 ETQLRAAFDRARRTGGKTGEALIQDLESRLDATVLRAGFARTVYQARQFVTHQHVLVNGK 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+ SYR K GD +++ +KS+ + A+ A P Y+ V ++VA R+P Sbjct: 124 RVDRPSYRLKPGDFVQIAEKSRTKEPFVVAASGAHATPPAYLEVCLADLVARVERVPDRD 183 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + PV+ + LVVE YSR Sbjct: 184 E---VPVVCEEQLVVEHYSR 200 >gi|328541118|gb|AEB21783.1| ribosomal protein S4 [Acromastigum anisostomum] Length = 197 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ + SY K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGALPGLTSKTLKSKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNH H+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + +I + Sbjct: 117 NIVDIPSYNCELGDIITIRDKEKSQSIITKNINLFQNLKIPSHLTFDLIKLCGSINQIVN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 177 R---ESIDLKINELLIVEYYSR 195 >gi|294337256|emb|CAQ52777.1| ribosomal protein S4 [Pterobryopsis hoehnelii] Length = 202 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SY+CK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNSCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|77862523|gb|ABB04534.1| small ribosomal protein 4 [Cryptomitrium himalayense] Length = 201 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N ++I SY CK D+I +K + K + + + ++ +P +++ + + Sbjct: 117 LINNNLIDIPSYNCKPKDLITIKDRPKSKSIITKNLNCFQKPKIPNHLTFDLTQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + LVVE+YSR Sbjct: 177 QVIDR---EWIFLKINELLVVEYYSR 199 >gi|294337212|emb|CAQ52755.1| ribosomal protein S4 [Neckera complanata] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|67035628|gb|AAY62745.1| small ribosomal protein subunit 4 [Chorisodontium mittenii] gi|222103508|gb|ACM44283.1| small ribosomal protein subunit 4 [Orthodicranum montanum] gi|222103538|gb|ACM44298.1| small ribosomal protein subunit 4 [Orthodicranum montanum] Length = 199 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ +++ +P +++ + +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|26399168|sp|Q9FSA4|RR4_SPHDO RecName: Full=30S ribosomal protein S4, chloroplastic gi|10933877|emb|CAC14065.1| small ribosomal protein 4 [Sphaerocarpos donnellii] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A R++G T L+ E RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARRAKGSTGEVLLQLSEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541056|gb|AEB21752.1| ribosomal protein S4 [Kurzia gonyotricha] Length = 200 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKTLKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE RLD + R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I +++K K + V + L + +P +++ + + + + Sbjct: 117 NNDIVDIPSYNCEPGDIITIREKQKSQSVVTKNINLFQNLKIPSHLTFDSMKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197 >gi|83319988|ref|YP_424224.1| 30S ribosomal protein S4 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|90101693|sp|Q2SSN9|RS4_MYCCT RecName: Full=30S ribosomal protein S4 gi|83283874|gb|ABC01806.1| 30S ribosomal protein S4 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 208 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 MS+ S K RR G ++ K S R PG HG+ R K K S +G QL+ KQK Sbjct: 1 MSRFIGSTFKKSRRFGFSILETGKEFSKGKKRITTPGQHGKERAKVKVSEYGQQLQEKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +K YG +SE++FR+ F +A + +G N + LESRLD IVYR F T ARQ VN Sbjct: 61 VKFMYG-LSERQFRNTFAKAKKMQGILGTNFLVLLESRLDNIVYRLGFSATRQGARQLVN 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H H+LVNG+ V+I SY GD++EVK K+ VLEA Q E + E++ VN + + Sbjct: 120 HGHILVNGKKVDIPSYLLSVGDLVEVKASMKKNEKVLEALQNNEATL-EFVKVNKNEVKG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FVR+P + + +L+VE+Y+R Sbjct: 179 EFVRLPERNE---LNSEISESLIVEWYNR 204 >gi|26399166|sp|Q9FS90|RR4_SPLSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|10798708|emb|CAC12833.1| small ribosomal protein 4 [Splachnum sphaericum] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A ++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + + ++ +P ++ N Sbjct: 117 ILVNEHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|328541092|gb|AEB21770.1| ribosomal protein S4 [Bazzania nitida] Length = 198 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K+ RR+G K+ S+ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKVIRRLGALPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N Sbjct: 57 LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY CK GD+I ++ K K + + + L + VP +++ + + + + Sbjct: 117 NNIVDIPSYNCKPGDIIAIRDKQKSQSMITKNINLFQNLKVPSHLTFDSIKLCGSINQTI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWINLKINELLVVEYYSR 196 >gi|48527373|gb|AAT45819.1| small ribosomal protein 4 [Plagiochila exigua] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R +G K+ +S L K S + ++L KQK++ Sbjct: 1 MSRYRGPRXKIXRCLGSLPGLTSKTL---KSKSGSLDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 PYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +K K K + V + ++ +P +++ + + + Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + LVVE+YSR Sbjct: 177 NQMINR---EWINLKINEWLVVEYYSR 200 >gi|63191679|gb|AAY34801.1| small ribosomal protein subunit 4 [Isodrepanium lentulum] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + KI RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K++ K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKKQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LNRESIGLKINELLVVEYYSR 200 >gi|26399099|sp|P59139|RR4_HOOLU RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504369|emb|CAC80629.1| small ribosomal protein 4 [Hookeria lucens] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN VNI SYRCK D I +K + K A + + + ++ P +++ + Sbjct: 117 IGVNDCIVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI L + + LVVE+YSR Sbjct: 177 NRI---LDRESTGLKINELLVVEYYSR 200 >gi|67035594|gb|AAY62728.1| small ribosomal protein subunit 4 [Archidium donnellii] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ + ++ K S + ++L KQK++ +YG Sbjct: 4 YRGPRVKIIRRLGALPGLTNKTSELKSNS---VNQSTSNKKISQYRIRLEEKQKLRFHYG 60 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 61 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 119 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + V++ +++ VP ++++N +I Sbjct: 120 NNCIVNIPSYRCKPQDFITIKNRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI 179 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 ---LNHESIGLKINELLVVEYYSR 200 >gi|152060930|sp|Q5PBD6|RS4_ANAMM RecName: Full=30S ribosomal protein S4 Length = 204 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 94/198 (47%), Positives = 128/198 (64%), Gaps = 2/198 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G NLWGR K PV TR+Y G HG K S FG Q A QK K YY +S Sbjct: 8 KYRASRRLGVNLWGRSKDPVATRNYPSGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 66 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ + F A +GDT NL+ LESRL +VY A FVPT+F+ARQ V+H+HV VNG+ Sbjct: 67 KQLTNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 126 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 VNI S+ K GDV+++++++ +L VL A Q ER VP+++ V+ A ++R+P + Sbjct: 127 VNIPSFSVKPGDVVQIRERATELPMVLAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE 186 Query: 188 DVPYPVIMQPNLVVEFYS 205 VPYP M+ NLVVEF+S Sbjct: 187 -VPYPANMEVNLVVEFFS 203 >gi|313665172|ref|YP_004047043.1| ribosomal protein S4 [Mycoplasma leachii PG50] gi|312949285|gb|ADR23881.1| ribosomal protein S4 [Mycoplasma leachii PG50] Length = 208 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 MS+ S K RR G ++ K S R PG HG+ R K K S +G QL+ KQK Sbjct: 1 MSRFIGSTFKKSRRFGFSILETGKEFSKGKKRITTPGQHGKERAKVKVSEYGQQLQEKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +K YG +SE++FR+ F +A + +G N + LESRLD IVYR F T ARQ VN Sbjct: 61 VKFMYG-LSERQFRNTFAKAKKMQGILGTNFLVLLESRLDNIVYRLGFSATRQGARQLVN 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H H+LVNG+ V+I SY GD++EVK K+ VLEA Q E + E++ VN + + Sbjct: 120 HGHILVNGKKVDIPSYLLSVGDLVEVKSSMKKNEKVLEALQNNEATL-EFVKVNKNEVKG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 FVR+P + + +L+VE+Y+R Sbjct: 179 EFVRLPERNE---LNSEISESLIVEWYNR 204 >gi|159106866|ref|YP_001531285.1| ribosomal protein S4 [Lolium perenne] gi|166897630|sp|P69646|RR4_LOLPR RecName: Full=30S ribosomal protein S4, chloroplastic gi|158934400|emb|CAO85978.1| ribosomal protein S4 [Lolium perenne] Length = 201 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQTLMASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199 >gi|83416514|gb|ABC18277.1| small ribosomal subunit protein 4 [Herbertus aduncus] Length = 200 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K + SY + K S + ++L KQK+ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLXFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ Sbjct: 58 G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHIS 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + + Sbjct: 117 INNDIVDIPSYXCEPGDIITIKNKQKXQSIITKNINLFQKLKIPNHLTFDLTKLHGSVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + L VE+YSR Sbjct: 177 MINR---EWVNLKINELLXVEYYSR 198 >gi|328541062|gb|AEB21755.1| ribosomal protein S4 [Telaranea trilobata] Length = 200 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKTLKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRTARKAKGSTGQVSLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHIPI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P ++ + + + R Sbjct: 117 NYNIVDIPSYNCEPGDIITIRAKPKSQSVITKNINLFQNLKIPSHLIFDSTKLCGSINRT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197 >gi|260677422|ref|YP_003208190.1| ribosomal protein S4 [Coix lacryma-jobi] gi|209361360|gb|ACI43275.1| ribosomal protein S4 [Coix lacryma-jobi] Length = 201 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN R V+I S+RCK D+I K + V ++ +P++++V+ Sbjct: 116 ILVNDRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199 >gi|26399106|sp|P59143|RR4_HYPDI RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504363|emb|CAC81025.1| small ribosomal protein 4 [Hypopterygium didictyon] Length = 202 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D I +K + K A + + + ++ +P +++ N Sbjct: 117 ILVNGYIVDIPSYRCKPQDFINIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LNRESIGLKINELLVVEYYSR 200 >gi|25166523|dbj|BAC24713.1| rpsD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 225 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR G +L+ + + ++ PG HG R+S+ S +G+QLR KQ Sbjct: 20 MAKYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDHLPGQHG-SRRSRLSDYGIQLREKQ 78 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ Y I E++F+ +K+A R +G+T NL+ LESRLD +VYR F T +RQ + Sbjct: 79 KLRRMY-VILERQFKKYYKKAVRMKGNTGENLLILLESRLDNVVYRMGFGSTRLESRQLI 137 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +++N + +NI SY+ K D IEVK+ +K+ + + A +++E R+ +I V+ M Sbjct: 138 SHKSIIINKKVINIPSYQIKPNDCIEVKEIAKKQSRIKAAIEISEQREKQSWIDVDRVKM 197 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F + P + +L++E YS+ Sbjct: 198 QGIFKKFPDRSD---LSSEINEHLIIELYSK 225 >gi|294792833|ref|ZP_06757980.1| ribosomal protein S4 [Veillonella sp. 6_1_27] gi|294794587|ref|ZP_06759723.1| ribosomal protein S4 [Veillonella sp. 3_1_44] gi|294454917|gb|EFG23290.1| ribosomal protein S4 [Veillonella sp. 3_1_44] gi|294456732|gb|EFG25095.1| ribosomal protein S4 [Veillonella sp. 6_1_27] Length = 195 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R ++ K+ RR G N++G K+ + +R+ K S +G QL KQK+K Sbjct: 1 MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY ++ E++F + +A + +G T N++ LE RLD +VYR F +I ARQ VNH H Sbjct: 54 YY-NLLERQFVRYYDKAKKMQGVTGQNMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR V+I S+ CK GDVIE+++ S+ Q YI + D ATF Sbjct: 113 ILVNGRRVDIPSFSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLDGFKATFT 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + L+VE YS+ Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195 >gi|289804412|ref|ZP_06535041.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 175 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 72/176 (40%), Positives = 110/176 (62%), Gaps = 6/176 (3%) Query: 32 YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISF 91 PG HG RK + S +G+QLR KQK+++ YG + E++FR+ +KEA R +G+T NL++ Sbjct: 5 QAPGQHGA-RKPRLSDYGVQLREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLAL 62 Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RLD +VYR F T ARQ V+H+ ++VNGR VNI SY+ DV+ +++K+K+ + Sbjct: 63 LEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQS 122 Query: 152 SVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V A +LAE R+ P ++ V+ M T+ R P + +L+VE YS+ Sbjct: 123 RVKAALELAEQREKPTWLEVDAGKMEGTYKRKPERSD---LSADINEHLIVELYSK 175 >gi|77862509|gb|ABB04527.1| small ribosomal protein 4 [Asterella grollei] Length = 200 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ + Y ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY CK D+I +K + K + +++ ++ +P +++ + + + Sbjct: 117 INNNPVDIPSYNCKPKDLITIKDRPKSKSIIIKNLNSFQKQKIPNHLTFDLTQVKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + LVVE+YSR Sbjct: 177 IIDR---EWIFFKINELLVVEYYSR 198 >gi|228016218|gb|ACP51054.1| ribosomal protein S4 [Pinus squamata] Length = 203 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + RK S + ++L KQK++ Sbjct: 1 MSRYRGPRFKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G T L+ LE RL+ I++R PTI ARQ VNH H Sbjct: 59 HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201 >gi|328541076|gb|AEB21762.1| ribosomal protein S4 [Drucella integristipula] Length = 199 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ + K S + ++L KQK++ +YG Sbjct: 1 YRGPRAKVIRRLGALPGLTSKTL---KPKSTHNDRSASNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+ Sbjct: 58 -LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ G++I V+ + K + + + + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGNIITVRDEQKSRSVITKNKDSFQNLKIPNHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + L+VE+YSR Sbjct: 177 INR---EWIDLKINELLIVEYYSR 197 >gi|63101103|gb|AAY33176.1| small ribosomal protein 4 [Timmia megapolitana] Length = 199 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A +++ +++ VP +++ N+ +I Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNRQKSQAILMKNIDFSQKYKVPNHLTFNYLQKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|118626075|emb|CAL39341.1| small ribosomal protein 4 [Odontoschisma macounii] Length = 202 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLRSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD V+R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N ++I SY C+ GDVI +K K K + + + L+++ +P +++ + + + Sbjct: 117 ISINNDIIDIPSYDCEPGDVITIKDKQKSRSIITKNINLSQKSKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 177 DQIVNR---EWVNLKINELLVVEYYSR 200 >gi|228016097|gb|ACP50935.1| ribosomal protein S4 [Pinus rzedowskii] Length = 201 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RL+ I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRTKGSTGQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|67035626|gb|AAY62744.1| small ribosomal protein subunit 4 [Paraleucobryum enerve] Length = 199 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I ++ + K A +++ +++ +P +++ + +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|328541150|gb|AEB21799.1| ribosomal protein S4 [Lepidozia ulothrix] Length = 200 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTLKPKSNH---NDRSASNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|26399095|sp|P59137|RR4_CATCI RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504381|emb|CAC80635.1| small ribosomal protein 4 [Catharomnion ciliatum] Length = 202 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D I +K + K + + + ++ +P ++ N Sbjct: 117 ILVNGYIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLIYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDHESIGLKINELLVVEYYSR 200 >gi|92417449|gb|ABE76820.1| ribosomal protein subunit 4 [Pellia epiphylla] Length = 199 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ SY ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRAKIIRRLGALPGLTSKTLKLESSY---INQSTPNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH H+++ Sbjct: 58 -LTERQLLKYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHGHIVI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N +V+I SY C+ DVI +K ++K + + + + +P +++ + + + Sbjct: 117 NDYTVDIPSYNCEPRDVITIKNRNKSQSLITKNIDSFRKPKIPNHLTFDFTKFRGSVNQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 IDR---ECIDLKINELLVVEYYSR 197 >gi|294337106|emb|CAQ52703.1| ribosomal protein S4 [Distichophyllum crispulum] Length = 202 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGVLPGLTNKILQLKSNS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + + ++ +P +++ N Sbjct: 117 ILVNNFIVDIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|46811050|gb|AAT01843.1| small ribosomal protein 4 [Scapania nemorea] Length = 197 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+LVN Sbjct: 57 TERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 DTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSVNQTVN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---ECINLKINELLVVEYYSR 195 >gi|125662732|gb|ABN50316.1| small ribosomal protein 4 [Illicium verum] Length = 203 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 11/208 (5%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + K RR+G K P G L Q R K S + ++L KQK++ + Sbjct: 2 SRYRGPRFKKIRRLGSLPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 58 YG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHT 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMVAT 178 LVNGR V+I SYRCK D+I + + + A + + +++ ++P++++++ Sbjct: 117 LVNGRLVDIPSYRCKPRDIITTRDEHRSRALIQNSIDSSQKEELPKHLTLHSLQYQYKGL 176 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 177 VNQIIDSK---WVGLKINELLVVEYYSR 201 >gi|57234752|ref|YP_181245.1| 30S ribosomal protein S4 [Dehalococcoides ethenogenes 195] gi|90101687|sp|Q3Z954|RS4_DEHE1 RecName: Full=30S ribosomal protein S4 gi|57225200|gb|AAW40257.1| ribosomal protein S4 [Dehalococcoides ethenogenes 195] Length = 207 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54 MS+ + ++ RR G+ L+ + K R PG G+ R+ S G QLR Sbjct: 1 MSRETGAVCRMCRRSGDKLFLKGDKCVTKCVFEKRPKAPGPQLGRPRR--LSDRGQQLRH 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ ++ YG ++E++FR F A G T N++ LE RLD +++R F + ARQ Sbjct: 59 KQSIRWSYG-MTERQFRRFFGLATAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+LVNG+ +I SY KEG I V++ SK A ++ E + +P ++S++ Sbjct: 118 IVMHGHILVNGQKTDIPSYLVKEGQEITVRETSKATAYFKTLAENIEAKAIPGWLSLDRK 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P++ VVE+YSR Sbjct: 178 TLSGKVISLPAAGD---IDARFDAQTVVEYYSR 207 >gi|313892885|ref|ZP_07826462.1| ribosomal protein S4 [Veillonella sp. oral taxon 158 str. F0412] gi|313442238|gb|EFR60653.1| ribosomal protein S4 [Veillonella sp. oral taxon 158 str. F0412] Length = 195 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R ++ K+ RR G N++G K+ + +R+ K S +G QL KQK+K Sbjct: 1 MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY ++ E++F + +A + +G T N++ LE RLD +VYR F +I ARQ VNH H Sbjct: 54 YY-NLLERQFVRYYDKAKKMQGVTGENMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR V+I SY CK GDVIE+++ S+ Q YI + + ATF Sbjct: 113 ILVNGRRVDIPSYSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLEGFKATFT 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + L+VE YS+ Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195 >gi|303229707|ref|ZP_07316494.1| ribosomal protein S4 [Veillonella atypica ACS-134-V-Col7a] gi|303231269|ref|ZP_07318007.1| ribosomal protein S4 [Veillonella atypica ACS-049-V-Sch6] gi|302514176|gb|EFL56180.1| ribosomal protein S4 [Veillonella atypica ACS-049-V-Sch6] gi|302515629|gb|EFL57584.1| ribosomal protein S4 [Veillonella atypica ACS-134-V-Col7a] Length = 195 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R ++ K+ RR G N++G K+ + +R+ K S +G QL KQK+K Sbjct: 1 MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY ++ E++F + +A + +G T N++ LE RLD +VYR F +I ARQ VNH H Sbjct: 54 YY-NLLERQFVRYYDKAKKMQGVTGQNMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR V+I SY CK GDVIE+++ S+ Q YI + + ATF Sbjct: 113 ILVNGRRVDIPSYSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLEGFKATFT 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + L+VE YS+ Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195 >gi|66990672|emb|CAI29114.1| small ribosomal protein 4 [Plagiochila barteri] Length = 198 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + + K + V + L ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGTEQKSQSIVTKNINLFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 ++ + + LVVE+ Sbjct: 177 NQMINR---EWLNLKTNEVLVVEY 197 >gi|157689420|gb|ABV65266.1| ribosomal protein S4 [Begonia cucullata] Length = 197 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 9/203 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K RR+G K P G L Q SK S + ++L KQK++ +YG Sbjct: 1 RGPRFKKIRRLGALPGLTSKKP----RTGSDLKNQSHSSKKSQYRIRLEEKQKLRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+ VN Sbjct: 56 LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIIFRLGIASTIPQARQLVNHRHIFVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 G V+I SYRCK D+I K + K A + + +VP++++++ +I Sbjct: 116 GGIVDIPSYRCKPRDIITAKDEQKSRALIQNYLNSSPSEEVPKHLTLHPFQYKGLVNQII 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 DSK---SVGLKINELLVVEYYSR 195 >gi|223931073|ref|YP_002586934.1| ribosomal protein S4 [Syntrichia ruralis] gi|219562287|gb|ACL27618.1| ribosomal protein S4 [Syntrichia ruralis] Length = 202 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN VNI SYRCK D I + + K + + +++ +P +++ N Sbjct: 117 ILVNNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDQESIGLKINELLVVEYYSR 200 >gi|77862507|gb|ABB04526.1| small ribosomal protein 4 [Asterella africana] Length = 201 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N SV+I SY CK D+I +K + K + + ++ +P +++ + + Sbjct: 117 LINNNSVDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|6002017|emb|CAA58914.1| ribosomal protein S4 [Acorus calamus] Length = 196 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTSKGT----RPGSDLRNQFRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R PTI ARQ +NHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLLNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + + + R ++P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKVLIQNNMDSSTREELPKHLTLDSFQHKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196 >gi|77862533|gb|ABB04539.1| small ribosomal protein 4 [Mannia androgyna] Length = 201 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+ Sbjct: 58 YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N V+I SY CK D+I +K + K + + ++ +P +++ + + Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|328541112|gb|AEB21780.1| ribosomal protein S4 [Telaranea diacantha] Length = 199 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE R D ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + ++S L + +P +++++ + + + Sbjct: 117 NENIVDIPSYNCEPGDIITIRDKQKSQSLITKSSSLFQNLKIPNHLTLDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---ESINLKINELLVVEYYSR 197 >gi|222103552|gb|ACM44305.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum] Length = 202 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D I +K + + + ++ +P +++ N N Sbjct: 117 ILVNDRLVDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQILDRD---SIDLKINELLVVEYYSR 200 >gi|67035732|gb|AAY62797.1| small ribosomal protein subunit 4 [Quathlamba debilicostata] Length = 196 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+ S Q K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGVLPGLTNKTSQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SY CK D I +K + K A + + +++ VP +++ + +I Sbjct: 117 IVDIPSYCCKPEDSITIKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|6002077|emb|CAA58948.1| ribosomal protein S4 [Sagittaria sagittifolia] Length = 196 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + V + + + +P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKTLVQNSIASSSHEGLPKHLTLDSSQYKGFV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + LVVE+ Sbjct: 176 NQIIDSK---WVGLKRNELLVVEY 196 >gi|77019145|emb|CAH60178.1| chloroplast 30S ribosomal protein S4 [Schistidium apocarpum] Length = 199 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197 >gi|328541106|gb|AEB21777.1| ribosomal protein S4 [Bazzania tricrenata] Length = 198 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K+ RR+G K+ S+ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N Sbjct: 57 LTERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNIVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWINLKINELLVVEYYSR 196 >gi|328955886|ref|YP_004373219.1| SSU ribosomal protein S4P [Coriobacterium glomerans PW2] gi|328456210|gb|AEB07404.1| SSU ribosomal protein S4P [Coriobacterium glomerans PW2] Length = 198 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++G + S + +R+ K S +G QLR KQK K Sbjct: 1 MAIDRTPVLKRCRQLGIDPVELGYSSKKE-----SIRQPKRRRKESEYGTQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + A + G T NL++ LE+RLD +V+R F T ARQ V H H Sbjct: 56 IYGVL-EKQFRRYYFRALKMTGITGENLMTLLETRLDNVVFRLGFARTRKEARQTVRHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG V+I SY KEGDVI V K + L + EA +ER +VP ++ V+ + + + Sbjct: 115 FTVNGHRVDIPSYLVKEGDVIAVGAKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGSV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +PS + ++ L++E YS+ Sbjct: 175 LSLPSREQ---ISTDIKEQLIIEHYSK 198 >gi|284047202|ref|YP_003397542.1| ribosomal protein S4 [Conexibacter woesei DSM 14684] gi|283951423|gb|ADB54167.1| ribosomal protein S4 [Conexibacter woesei DSM 14684] Length = 210 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTR-SYGPGLHGQRRKSKPSYFGLQLR 53 M + K+ RR G +L + KS + R PG HG R+ + S + QLR Sbjct: 1 MGRYTGPVEKLSRREGVDLCLKGERRLNGKSALERRGPQPPGQHGNARRRRESVYAEQLR 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK K+YYG + EK+FR A + R L+ LE RLD +VYR T A Sbjct: 61 EKQKAKRYYG-VREKQFRRYVAAATKKREGVVGEQLLQLLEQRLDNVVYRLGLASTRPQA 119 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNH 172 RQFV H HVLVNG+ +I S + K GDV+ V ++ A++ R V ++ + Sbjct: 120 RQFVGHGHVLVNGQRCDIASRQVKPGDVVMVAPEAAIRPVSTVATEQMGR-VGAWLEADF 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D++ +R+P + + L+VEFYSR Sbjct: 179 DSLAGKVLRLPVRNE---IDAPVAEQLIVEFYSR 209 >gi|309322181|ref|YP_003934096.1| ribosomal protein S4 [Geranium palmatum] gi|197131486|gb|ACH47261.1| ribosomal protein S4 [Geranium palmatum] gi|300069274|gb|ADJ66395.1| ribosomal protein S4 [Geranium palmatum] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K R+G K P + P R SK + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKICRLGSLPGLTTKRPPDKSKSNP------RFSKKKEYQIRLKEKQKLRF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 55 HYG-LTERQLLKYVRIAGKAKGPTGPVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I ++K K + + +P +++++ Sbjct: 114 ILVNGRMVDIPSYRCKPRDIITAREKEKSRTLIQNYLDSSPHNKLPYHLTIHPLQYKGLV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LVVE+YSR Sbjct: 174 NQIIARG---WVGLKIKELLVVEYYSR 197 >gi|80974154|gb|ABB53770.1| small ribosomal subunit protein 4 [Garovaglia powellii] Length = 202 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T + LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VN VNI SYRCK DVI VK + + + ++ +P +++ Sbjct: 117 IFVNDCIVNIPSYRCKPQDVIIVKNEKNSEGVINKNEDFHQKYKIPNHLTYIFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NKI---LDRESIGLKINELLVVEYYSR 200 >gi|67035588|gb|AAY62725.1| small ribosomal protein subunit 4 [Trematodon longicollis] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +L+ +++ VP +++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDQQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGVVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|67035706|gb|AAY62784.1| small ribosomal protein subunit 4 [Bucklandiella crispipila] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFNSLENKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197 >gi|328541090|gb|AEB21769.1| ribosomal protein S4 [Neogrollea notabilis] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTNKTLKPKSGY---NDRSTSNRKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHITI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NDNIVDIPSYNCQPGDFIIIRDKQKSQSIITKNFNLFQNSKIPSHLTFDSIKLYGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197 >gi|227495469|ref|ZP_03925785.1| ribosomal protein S4 [Actinomyces coleocanis DSM 15436] gi|226831016|gb|EEH63399.1| ribosomal protein S4 [Actinomyces coleocanis DSM 15436] Length = 206 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 116/210 (55%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R + ++ R +G L + R Y PG HG+ R+ + S + ++L+ KQ+++ Sbjct: 1 MANRSRRQVRLSRALGIALTPKAARYFERRPYAPGQHGRARRRQESDYAVRLKEKQRLRA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I E + R F+EA R+ G T NL+ LE RLD +V R+ F TI ARQ V HRH Sbjct: 61 QYG-IREAQMRRAFEEALRAEGKTGSNLVELLEMRLDALVLRSGFARTIAQARQVVVHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176 +LV+G+ V+ S+R K G I+VK KS+ A+ RD VP Y+ V + + Sbjct: 120 ILVDGQIVDRPSFRVKPGQTIQVKPKSQTTVPFEIAAAGVHRDVLAPVPAYLDVELERLR 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT VR P + PV+ LVVE+YSR Sbjct: 180 ATLVRRPERAE---VPVVCDDQLVVEYYSR 206 >gi|67035632|gb|AAY62747.1| small ribosomal protein subunit 4 [Holomitrium arboreum] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VN+ SYRCK D I +K + K +++ +++ +P +++ + +I Sbjct: 117 NNRIVNVPSYRCKPQDFITIKDRQKSQVMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|63100967|gb|AAY33108.1| small ribosomal protein 4 [Stoneobryum mirum] Length = 202 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+P S + K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVKIIRRLGVLPGLTNKTPQLKSSSA---NQLTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++ Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHII 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K + K + + ++ +P +++ N + Sbjct: 119 VNHRIVDIPSYRCKPQDFITIKNRQKSQDIITKNIDFNQKSKIPNHLTYNFLEKKGFVNQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 179 IIDR---ELINLKINELLVVEYYSR 200 >gi|157689516|gb|ABV65314.1| ribosomal protein S4 [Lythrum flagellare] Length = 195 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I + K A + + +VP +++++ +I S Sbjct: 116 IVDIPSYRCKPRDIITARDDQKSKAMIQNYLDSSPHEEVPNHLTLHPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLKINELLVVEYYSR 193 >gi|63101097|gb|AAY33173.1| small ribosomal protein 4 [Ptychomitrium gardneri] Length = 202 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K A V++ ++ VP +++ N + Sbjct: 119 VNNRIVNIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQNYKVPNHLTFNSLEKKGLVNQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 179 I---LDHGSIGLKINELLVVEYYSR 200 >gi|3098226|gb|AAC15561.1| small ribosomal protein 4 [Leptotheca boliviana] Length = 200 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+P + ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGVLPGLTNKTPQLKSNS---INQLTANKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-ITEQQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N R V+I SYRCK D I +K + K A + + ++ +P +++ N + Sbjct: 117 INDRIVDIPSYRCKPQDFITIKDQRKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGVVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + L+VE+YSR Sbjct: 177 I---LNRESIDLKINELLIVEYYSR 198 >gi|69216104|gb|AAZ03890.1| ribosomal protein S4 [Ginkgo biloba] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P G + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLRALPGLTSKRP----KSGNDPINRSSSGKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D I++R+ TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRSDNIIFRSGMALTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATF 179 +LVN R V+I SYRCK DVI ++ + + A + L++RD P +++++ Sbjct: 116 LLVNDRVVDIPSYRCKPQDVITIRDQQRSRAIIKNNINLSQRDKMPNHLTLHSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI S + + LVVE+YSR Sbjct: 176 NRIIDSK---WINLKINELLVVEYYSR 199 >gi|328541068|gb|AEB21758.1| ribosomal protein S4 [Zoopsis leitgebiana] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGALPGLTSKTLKLKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ E RLD + R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTILRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNDIVDIPSYNCELGDIIMIRDKPKSQSMITKNINLFQNSKIPSHLAFDPIKLCGSVNQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 IDR---ESVNLKINELLVVEYYSR 197 >gi|3098150|gb|AAC15523.1| small ribosomal protein 4 [Bryobrittonia longipes] Length = 196 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +V+R PTI ARQ VNHRH+LVNG Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNGC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A +++ +++ VP +++ + +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQAILIKNIDFSQKYKVPNHLTFDSLQKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|67035644|gb|AAY62753.1| small ribosomal protein subunit 4 [Hygrodicranum bolivianum] Length = 198 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTSKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 DRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|110801413|ref|YP_697048.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124] gi|168210337|ref|ZP_02635962.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626] gi|123344499|sp|Q0TMU2|RS4B_CLOP1 RecName: Full=30S ribosomal protein S4 B gi|110676060|gb|ABG85047.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124] gi|170711584|gb|EDT23766.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626] Length = 197 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59 M+K + K+ RR+G N+ G PK+ G R K S +G+QL KQ+++ Sbjct: 1 MAKMMGPRFKMCRRLGLNVVGHPKAMKRA------DRGTSRADKKLSDYGIQLLEKQRLR 54 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG + E++F +A S+ L+ LESRLD +VYR F +I ARQ VNH Sbjct: 55 AYYG-VMERQFTRYVDQAFNSKEQPGEALLMILESRLDNMVYRMGFASSIRQARQMVNHG 113 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H LVNG+ VNI S+R GD + +++KS++ + + + Y+S DN F Sbjct: 114 HFLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYVSKEEDNFKGIF 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P+ +Q L+VEFYS+ Sbjct: 174 TRKPKREE---IPITIQEQLIVEFYSK 197 >gi|46810996|gb|AAT01816.1| small ribosomal protein 4 [Calycularia crispula] Length = 197 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR G K+ Y ++ K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRPGALPGLTTKTLKLKSGY---INQSTSNRKISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ V+HRH+L+N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVSHRHILINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +V+I SY C+ GDVI K + K + + ++ L ++ +VP +++ + + R+ Sbjct: 117 DAVDIPSYNCEPGDVITTKDRQKSRSIITRSADLFQKPEVPNHLTFDLAQFRGSVNRMID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---ELIDLKINELLVVEYYSR 195 >gi|46811024|gb|AAT01830.1| small ribosomal protein 4 [Jungermannia leiantha] Length = 197 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 DIVDIPSYNCELGDIIAVKNKQKSQSIITKNINLFQKSKIPSHLTFDSAKLHGSVNQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWVHLKINELLVVEYYSR 195 >gi|67035700|gb|AAY62781.1| small ribosomal protein subunit 4 [Pseudobraunia californica] Length = 199 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R +NI SYRCK D I +K + K + +++ +++ +P +++ N +I Sbjct: 117 NNRIINIPSYRCKPQDFITIKDRQKSQSIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197 >gi|26399108|sp|P59144|RR4_HYPFI RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504359|emb|CAC81023.1| small ribosomal protein 4 [Hypopterygium filiculaeforme] Length = 202 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTPQLKSNL---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ N Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQRKSESIINKNINFYQKYKIPNHLTYNSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKVNELLVVEYYSR 200 >gi|307683499|dbj|BAJ19728.1| ribosomal protein S4 [Pseudotsuga sinensis var. wilsoniana] Length = 201 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE R D I++R PTI ARQ VNH H Sbjct: 57 HYG-LTEQQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + + + L +RD +P +++ N Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|14017574|ref|NP_114261.1| ribosomal protein S4 [Triticum aestivum] gi|26399159|sp|Q95H61|RR4_WHEAT RecName: Full=30S ribosomal protein S4, chloroplastic gi|13928207|dbj|BAB47036.1| ribosomal protein S4 [Triticum aestivum] Length = 201 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLAIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199 >gi|6002025|emb|CAA58919.1| ribosomal protein S4 [Alstroemeria aurantiaca] Length = 196 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKIPRSRN----DLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + R ++P++++++ Sbjct: 116 ILVNGRVVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPREELPKHLTIDPFQYKGWV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|222103440|gb|ACM44249.1| small ribosomal protein subunit 4 [Bryoxiphium norvegicum subsp. japonicum] Length = 198 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 DRIVNIPSYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196 >gi|140083429|gb|ABO84826.1| ribosomal protein S4 [Philonotis fontana] Length = 202 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D I +K + K A + + ++ +P +++ N Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVV +YSR Sbjct: 177 NQI---LDRESIGLKINELLVVVYYSR 200 >gi|66990664|emb|CAI29110.1| small ribosomal protein 4 [Plagiochila fusifera] Length = 198 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLASKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ + K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNEQKSQSLVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 ++ + + + LVVE+ Sbjct: 177 NQMINR---EWINLKINEVLVVEY 197 >gi|238018666|ref|ZP_04599092.1| hypothetical protein VEIDISOL_00510 [Veillonella dispar ATCC 17748] gi|269798510|ref|YP_003312410.1| ribosomal protein S4 [Veillonella parvula DSM 2008] gi|282849905|ref|ZP_06259288.1| ribosomal protein S4 [Veillonella parvula ATCC 17745] gi|237865137|gb|EEP66427.1| hypothetical protein VEIDISOL_00510 [Veillonella dispar ATCC 17748] gi|269095139|gb|ACZ25130.1| ribosomal protein S4 [Veillonella parvula DSM 2008] gi|282580342|gb|EFB85742.1| ribosomal protein S4 [Veillonella parvula ATCC 17745] Length = 195 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R ++ K+ RR G N++G K+ + +R+ K S +G QL KQK+K Sbjct: 1 MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY ++ E++F + +A + +G T N++ LE RLD +VYR F +I ARQ VNH H Sbjct: 54 YY-NLLERQFVRYYDKAKKMQGVTGQNMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR V+I S+ CK GDVIE+++ S+ Q YI + + ATF Sbjct: 113 ILVNGRRVDIPSFSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLEGFKATFT 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + L+VE YS+ Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195 >gi|67035614|gb|AAY62738.1| small ribosomal protein subunit 4 [Bryowijkia ambigua] Length = 199 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYIRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + +++ VP +++ N +I Sbjct: 117 NNRIVSIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|77862535|gb|ABB04540.1| small ribosomal protein 4 [Mannia fragrans] Length = 201 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N ++I SY CK D+I +K + K + + ++ +P +++ + + Sbjct: 117 LINNNPIDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLVQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|156598018|gb|ABU85275.1| ribosomal protein S4 [Cycas micronesica] Length = 201 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P +R+ R+ S + ++ KQK++ Sbjct: 1 MSRYRGPRLKIIRRLRTLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVN R V+I SYRCK DVI ++ + + A + + L+++D +P +++++ Sbjct: 116 ILVNDRVVDIPSYRCKPRDVITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|324986467|ref|YP_004276338.1| ribosomal protein S4 [Pinus monophylla] gi|323522562|gb|ADX94904.1| ribosomal protein S4 [Pinus monophylla] Length = 201 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G T L+ LE RL+ I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|294337291|emb|CAQ52794.1| ribosomal protein S4 [Zelometeorium patulum] Length = 202 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D + +K + K + + + ++ +P +++ Sbjct: 117 ILVNDCIVDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|92417453|gb|ABE76822.1| ribosomal protein subunit 4 [Dicranoweisia cirrata] Length = 198 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 DRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|222084129|ref|YP_002519581.1| ribosomal protein S4 [Keteleeria davidiana] gi|220983681|dbj|BAH11447.1| ribosomal protein S4 [Keteleeria davidiana] Length = 201 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE R D I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ N Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFNSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|67035686|gb|AAY62774.1| small ribosomal protein subunit 4 [Microcampylopus leucogaster] Length = 199 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ + + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + + + + +++ VP +++ N +I Sbjct: 117 NNYIVNIPSYRCKPQDFITIKNRQKSQSIIAKNLEFSQKYKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LTHESIGLNINELLVVEYYSR 197 >gi|309322306|ref|YP_003934157.1| ribosomal protein S4 [Cedrus deodara] gi|228017102|gb|ACP51924.1| ribosomal protein S4 [Cedrus deodara] gi|307683232|dbj|BAJ19540.1| ribosomal protein S4 [Cedrus deodara] Length = 201 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P Y + K S + ++ KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKALPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + + + + L +RD +P +++ N Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRSIIKKNIDLFQRDKLPNHLTFNSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|222103466|gb|ACM44262.1| small ribosomal protein subunit 4 [Sanionia uncinata] Length = 202 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 119 VNNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200 >gi|63145910|gb|AAY33893.1| small ribosomal protein 4 [Jensenia difformis] Length = 202 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G L G + +RS K S + ++L KQK++ + Sbjct: 2 SRYRGPRVKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFH 58 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH+ Sbjct: 59 YG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHI 117 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFV 180 L+N VNI SY CK DVI +K + + + + + L E+ +P +++ + + Sbjct: 118 LINDDIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 178 QIIDR---EWISLKINELLVVEYYSR 200 >gi|327399496|ref|YP_004340365.1| 30S ribosomal protein S4 [Hippea maritima DSM 10411] gi|327182125|gb|AEA34306.1| ribosomal protein S4 [Hippea maritima DSM 10411] Length = 208 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 106/213 (49%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M+ + R +G L+ + K R Y PG R+ SY GL L Sbjct: 1 MAVYTGPACRRCRALGVKLFLKGDRCFTDKCAFERRPYPPGKSRNARRKMSSY-GLHLAE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG + E++FR F+EA R +G+T NL+ LE RLD +VYR+ + AR+ Sbjct: 60 KQKAKAEYGVL-ERQFRKYFEEAKRQKGETGANLVVLLERRLDNVVYRSGMASSRREARR 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHD 173 V H H+ VNG V+I SY ++GDVI V K K + + R +I+V+ D Sbjct: 119 LVTHGHIRVNGHKVDIPSYLVRKGDVITVSDKMKAKEEFKRRFEENSRRMSASWINVDLD 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ ATFV +P+ P N +VE YS+ Sbjct: 179 NVSATFVDMPTRDDVQP---PFNENAIVELYSK 208 >gi|222103468|gb|ACM44263.1| small ribosomal protein subunit 4 [Drummondia sinensis] Length = 202 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 4 YRGPRVRIIRRLGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 60 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 61 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 119 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A + + +++ VP +++ N +I Sbjct: 120 NDCIVNIPSYRCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI 179 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 ---LDRESIDLKINELLVVEYYSR 200 >gi|222103472|gb|ACM44265.1| small ribosomal protein subunit 4 [Gollania varians] Length = 202 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|67035560|gb|AAY62711.1| small ribosomal protein subunit 4 [Tristichium mirabile] Length = 199 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGILPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ + +++ VP +++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNVEFSQKSKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|294337218|emb|CAQ52758.1| ribosomal protein S4 [Neckera urnigera] Length = 202 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R TI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMALTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|6002027|emb|CAA58920.1| ribosomal protein S4 [Arum italicum] Length = 196 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALAGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I K K + A + L+ +VP++++++ + Sbjct: 116 ILVNGGIVDIPSYRCKPRDIIATKDKQRSKALIQNNIALSSHEEVPKHLTIDSFHNKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196 >gi|67035678|gb|AAY62770.1| small ribosomal protein subunit 4 [Cladopodanthus speciosus] Length = 199 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ + + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + + + + +++ VP +++++ +I Sbjct: 117 NDYIVNIPSYRCKPQDFIPIKNQQKSQSIIAKNIEFSQKYKVPNHLTLDSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + M LVVE+YSR Sbjct: 177 ---LNNESIGLKMNELLVVEYYSR 197 >gi|72161417|ref|YP_289074.1| 30S ribosomal protein S4 [Thermobifida fusca YX] gi|90101732|sp|Q47R66|RS4_THEFY RecName: Full=30S ribosomal protein S4 gi|71915149|gb|AAZ55051.1| SSU ribosomal protein S4P [Thermobifida fusca YX] Length = 203 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + K ++ RR G L + R Y PG HG+R + S + ++ KQK++ YY Sbjct: 2 RYTGPKVRLSRRAGVPLTRKAVKYFEKRPYPPGEHGRRVRRSTSDYAVRQAEKQKLRWYY 61 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 +SEK+ +++ A + G T +I+ LE RL T++ RA F +I+AARQF+NH H+ Sbjct: 62 D-LSEKQLARVYENAKKRPGRTGEEMIAELELRLATVLLRAGFAASIYAARQFINHGHIT 120 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFV 180 V+G+ V+I SY+ K G ++ V++KS++L +EA++ A+ + Y++V+H ++ V Sbjct: 121 VDGKKVDIPSYQVKPGQIVSVREKSRKLVPFIEAAEGVHADEKIASYLAVSHKDLTIAVV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + PV LVVE+Y+R Sbjct: 181 DRPKREQ---VPVPFDEQLVVEYYAR 203 >gi|294337114|emb|CAQ52707.1| ribosomal protein S4 [Eurhynchiastrum pulchellum] Length = 202 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQLTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|6002071|emb|CAA58943.1| ribosomal protein S4 [Oncidium ansiferum] Length = 196 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + LH K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKIPRSRSDLQTQLH----SGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I K K + A + + R ++P +++++ Sbjct: 116 ILVNGRIVDIPSYRCKARDIITTKDKERSKALIQNYLVSSPRGELPNHLTIDSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 I S + + LVVE+ Sbjct: 176 NHIIDSK---WIGLKINELLVVEY 196 >gi|294337148|emb|CAQ52724.1| ribosomal protein S4 [Himantocladium plumula] Length = 202 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLINKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SY+CK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|222103438|gb|ACM44248.1| small ribosomal protein subunit 4 [Brothera leana] Length = 203 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ + + K S + ++L KQK++ +Y Sbjct: 4 RYRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHY 60 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 61 G-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 119 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SYRCK D I +K + K V + + +++ VP +++ N + Sbjct: 120 VNNYIVNIPSYRCKPQDFITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQ 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 180 I---LNKESIGLKINELLVVEYYSR 201 >gi|157689564|gb|ABV65338.1| ribosomal protein S4 [Stylobasium spathulatum] Length = 195 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPQARQLVNHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I + + K A + + R ++P+++++ +I S Sbjct: 116 MVDIPSYRCKPQDIITARDEQKSRALIQNYLDSSPREELPKHLTLQPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLKINELLVVEYYSR 193 >gi|328541028|gb|AEB21738.1| ribosomal protein S4 [Zoopsis ceratophylla] Length = 199 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGNLPGLTSKTLKQKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+ Sbjct: 58 -LTERQLLKYVHVARKAKGSTGQLLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SY C+ GD++ ++ K K + + + L + +P +++ + + + +I Sbjct: 117 NDDIVNIPSYNCEPGDILAIRDKQKSQSIITKNINLFQNLKMPSHLTFDSTKLCGSINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|331268173|ref|YP_004347822.1| ribosomal protein S4 [Chlorella variabilis] gi|325296350|gb|ADZ05070.1| ribosomal protein S4 [Chlorella variabilis] Length = 207 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54 M++ K +I RR+GE KS TR + PG HG +++ SK S + ++L+ Sbjct: 1 MARYRGPKLRIIRRLGELPGLTQKS--CTREFPPGQHGPKKRGSGNQKSKESQYAVRLKE 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++ YG ISE++ S +EA R +G T L+ LE RLD I++R F PTI AARQ Sbjct: 59 KQKLRFNYG-ISERQLISYVREARRRKGSTGEILLQLLEMRLDNIIFRLGFAPTIAAARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 + H H+++N R V I SY CK D + + S++ + E P ++ +N + Sbjct: 118 MITHGHIVINKRRVTIPSYLCKIHDNVSIALNSEKFVKTVIERSTTELSAP-HLEINREK 176 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A + + + LVVEFYSR Sbjct: 177 FSAIVRETVPRDQ---VGLQINELLVVEFYSR 205 >gi|257064663|ref|YP_003144335.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476] gi|256792316|gb|ACV22986.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476] Length = 198 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 110/210 (52%), Gaps = 16/210 (7%) Query: 1 MSKRESSKHKIDRRIGEN---LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57 M+ + K R++G + L K + R+ K S + LQLR KQK Sbjct: 1 MAIDRTPVLKRCRQLGIDPVVLGYSSKKESIRQPQ--------RRRKESEYALQLREKQK 52 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 K YG + EK+FR FK+A G T NL+ LESRLD +V+R F T ARQ V+ Sbjct: 53 AKFIYGVL-EKQFRGYFKKAKAMPGITGENLMRILESRLDNVVFRLGFARTRKEARQTVS 111 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176 H H+ VNG+ VNI SYR + GD++ V K+K L + A ER VP ++ V+ + + Sbjct: 112 HGHIYVNGKRVNIPSYRVRPGDLVSVAPKAKDLLVIKSALVSNERVQVPAWLEVDIEKLQ 171 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+ + + ++ L+VE YS+ Sbjct: 172 GSVLSLPNRDQ---IDLDIREQLIVELYSK 198 >gi|77862541|gb|ABB04543.1| small ribosomal protein 4 [Monoclea gottschei] Length = 201 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSISNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N V+I SY CK D+I +K + K + + ++ +P +++ + + Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|49182742|gb|AAT57833.1| small ribosomal protein [Lepicolea rara] Length = 195 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKTKSSY---IDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRNKEKSQSIITKNINLFQNLKIPSHLTFDSTKLCGSITQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWITLKINELLVVEYYSR 193 >gi|222103432|gb|ACM44245.1| small ribosomal protein subunit 4 [Polytrichum sphaerothecium] Length = 203 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P Y ++ K S + ++L KQK++ +Y Sbjct: 4 RFRGPRVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHY 60 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+L Sbjct: 61 G-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHIL 119 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SYRCK D I +K + + + +++ +P +++ N + Sbjct: 120 VNDCIVNIPSYRCKPQDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQ 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 180 I---LDRESISLKINELLVVEYYSR 201 >gi|77862511|gb|ABB04528.1| small ribosomal protein 4 [Asterella wallichiana] Length = 201 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTISGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N V+I SY CK D+I +K + K + + + ++ +P +++ + + Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLMQIKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|3098190|gb|AAC15543.1| small ribosomal protein 4 [Pohlia bolanderi] Length = 199 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDQQKSQIMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|47606918|gb|AAT36379.1| ribosomal protein subunit 4 [Pohlia nutans] Length = 199 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDQQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|222103524|gb|ACM44291.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum] Length = 203 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 121 NDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 181 LDRD---SIDLKINELLVVEYYSR 201 >gi|222103424|gb|ACM44241.1| small ribosomal protein subunit 4 [Blasia pusilla] Length = 202 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K + Y L+ K S + ++L KQK++ +YG Sbjct: 5 RGPRVKIIRRLGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG- 60 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 61 ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILIN 120 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 +V+I SY CK D+I +K + K + + + ++ +P +++ + +I Sbjct: 121 NINVDIPSYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQII 180 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 181 DR---EWINLKINELLVVEYYSR 200 >gi|66990660|emb|CAI29108.1| small ribosomal protein 4 [Plagiochila squamulosa] Length = 198 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 8/205 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSL 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 ++ ++ + + L VE+Y Sbjct: 177 NQMINA---EWINLKINELLAVEYY 198 >gi|66990658|emb|CAI29107.1| small ribosomal protein 4 [Plagiochila heterostipa] Length = 197 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE R D ++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K A V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 ++ + + + LVVE+ Sbjct: 177 NQMINR---EWINLKINEVLVVEY 197 >gi|22711973|ref|NP_683827.1| ribosomal protein S4 [Chaetosphaeridium globosum] gi|26399132|sp|Q8M9W2|RR4_CHAGL RecName: Full=30S ribosomal protein S4, chloroplastic gi|22416977|gb|AAM96577.1| ribosomal protein S4 [Chaetosphaeridium globosum] Length = 205 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P + + K K S + ++L+ KQK++ Sbjct: 1 MSRYRGPRIKIIRRLGILPGLTRKIPKKSMKLRSLSLQSKSKKKDSQYRIRLQEKQKLRY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG + E++ + A +++G T L+ LE RLD ++R PTI AARQ VNH H Sbjct: 61 HYG-LHERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPAARQLVNHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR VNI SYRCK D I + +++ +A + + + +P ++ + AT Sbjct: 120 ILVNGRIVNIPSYRCKPQDSITINTRTQTIALIQQNLGTTRKTKLPSHLMLRSTENSATV 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 180 KQIVSRQ---SVGLKINELLVVEYYSR 203 >gi|228017416|gb|ACP52233.1| ribosomal protein S4 [Larix occidentalis] Length = 201 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE R D I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + + + L +RD +P +++ N Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199 >gi|67035744|gb|AAY62803.1| small ribosomal protein subunit 4 [Chrysoblastella chilensis] Length = 199 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKIPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHLLV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K K A + + + +++ VP ++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKNCQKSQAIISKNIEFSQQYKVPNHLIFNSLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|110803742|ref|YP_699619.1| 30S ribosomal protein S4 [Clostridium perfringens SM101] gi|123341536|sp|Q0SQI8|RS4B_CLOPS RecName: Full=30S ribosomal protein S4 B gi|110684243|gb|ABG87613.1| 30S ribosomal protein S4 [Clostridium perfringens SM101] Length = 197 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59 M+K + K+ RR+G N+ G PK+ G R K S +G+QL KQ+++ Sbjct: 1 MAKMMGPRFKMCRRLGLNVVGHPKAMKRA------DRGTSRADKKLSDYGIQLLEKQRLR 54 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG + E++F +A S+ L+ LESRLD +VYR F +I ARQ VNH Sbjct: 55 AYYG-VMERQFTRYVDQAFNSKEQPGEALLMILESRLDNMVYRMGFASSIRQARQMVNHG 113 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H LVNG+ VNI S+R GD + +++KS++ + + + YIS DN F Sbjct: 114 HFLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYISKEEDNFKGIF 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P+ +Q L+VEFYS+ Sbjct: 174 ARKPKREE---IPITIQEQLIVEFYSK 197 >gi|294337122|emb|CAQ52711.1| ribosomal protein S4 [Glossadelphus glossoides] Length = 202 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|294337283|emb|CAQ52790.1| ribosomal protein S4 [Trachyloma planifolium] Length = 202 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K A + + + ++ +P ++ + Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLIYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIDLKINELLVVEYYSR 200 >gi|77862543|gb|ABB04544.1| small ribosomal protein 4 [Monosolenium tenerum] Length = 201 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K + Y ++ K S + ++L KQK++ Y Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKILKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFY 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVGIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N +V+I SY CK DVI +K + K + V + ++ +P ++S + + Sbjct: 117 LINNNTVDIPSYNCKPKDVITIKDRPKSQSIVKKNLNSFQKSKIPNHLSFDLMQVQGLVH 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|161347492|ref|NP_871570.2| 30S ribosomal protein S4 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|152031677|sp|Q8D1Y9|RS4_WIGBR RecName: Full=30S ribosomal protein S4 Length = 206 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 122/211 (57%), Gaps = 10/211 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56 M+K K K+ RR G +L+ + + ++ PG HG R+S+ S +G+QLR KQ Sbjct: 1 MAKYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDHLPGQHG-SRRSRLSDYGIQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ Y I E++F+ +K+A R +G+T NL+ LESRLD +VYR F T +RQ + Sbjct: 60 KLRRMY-VILERQFKKYYKKAVRMKGNTGENLLILLESRLDNVVYRMGFGSTRLESRQLI 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 +H+ +++N + +NI SY+ K D IEVK+ +K+ + + A +++E R+ +I V+ M Sbjct: 119 SHKSIIINKKVINIPSYQIKPNDCIEVKEIAKKQSRIKAAIEISEQREKQSWIDVDRVKM 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F + P + +L++E YS+ Sbjct: 179 QGIFKKFPDRSD---LSSEINEHLIIELYSK 206 >gi|222103470|gb|ACM44264.1| small ribosomal protein subunit 4 [Drummondia sinensis] Length = 202 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 4 YRGPRVRIIRRLGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 60 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 61 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 119 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A + + +++ VP +++ N +I Sbjct: 120 NDCIVNIPSYRCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI 179 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 ---LDRESIDLKINELLVVEYYSR 200 >gi|328541128|gb|AEB21788.1| ribosomal protein S4 [Telaranea chaetocarpa] Length = 199 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G + K+ +Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGASPGLTSKTLKRKSNY---NDRSTLNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I+++ K K + + + L + +P +++ + + + +I Sbjct: 117 NNNIVDIPSYNCEPGDLIKIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSITLCGSINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + VVE+YSR Sbjct: 177 INR---EWINLKINELFVVEYYSR 197 >gi|269217219|ref|ZP_06161073.1| ribosomal protein S4 [Slackia exigua ATCC 700122] gi|269129356|gb|EEZ60441.1| ribosomal protein S4 [Slackia exigua ATCC 700122] Length = 198 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 16/210 (7%) Query: 1 MSKRESSKHKIDRRIGEN---LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57 M+ + K R++G + L K + R+ K S + +QLR KQK Sbjct: 1 MAIDRTPVLKRCRQLGIDPVVLGYSSKKESIRQPQ--------RRRKESEYAIQLREKQK 52 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 K YG + EK+FR F++A R G T NL+ LESRLD +V+R F T ARQ V Sbjct: 53 AKFIYGVL-EKQFRGYFRKAKRMSGITGENLMRILESRLDNVVFRLGFARTRKEARQTVT 111 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176 H H+LVNGR V++ S+R + GD++ V K+K L + A ER VP ++ V+ + + Sbjct: 112 HGHILVNGRRVDVPSFRVRPGDLVSVAPKAKDLLVIKSALVSNERVQVPAWLEVDIEKLQ 171 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+ + + ++ L+VE YS+ Sbjct: 172 GSVLALPNRDQ---IDLDIKEQLIVELYSK 198 >gi|63191651|gb|AAY34787.1| small ribosomal protein subunit 4 [Pseudoleskeella tectorum] Length = 199 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|222103490|gb|ACM44274.1| small ribosomal protein subunit 4 [Aulacomnium turgidum] Length = 200 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 2 YRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LV Sbjct: 59 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + L ++ +P +++ + +I Sbjct: 118 NDHIVDIPSYRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLVNQI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198 >gi|328541134|gb|AEB21791.1| ribosomal protein S4 [Telaranea patentissima] Length = 200 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKILKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GDVI +K K K + + + L + + +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDVITIKDKQKSRSIITKNINLFQNLKIASHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|67035688|gb|AAY62775.1| small ribosomal protein subunit 4 [Pilopogon gracilis] Length = 199 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ + + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + + + +++ VP +++ N +I Sbjct: 117 NNYIVNIPSYRCKPEDFITIKNRQKSQSMIARNLEFSQKYKVPTHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LNHESIGLNINELLVVEYYSR 197 >gi|270300641|gb|ACZ69399.1| ribosomal protein S4 [Radula boryana] gi|270300643|gb|ACZ69400.1| ribosomal protein S4 [Radula gottscheana] Length = 202 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G+ K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGDLPGLSNKTLKPKSSY---IDRSVSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A ++G T L+ LE RLD ++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNAKGSTGQILLQLLEMRLDNTIFCLGMAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N +V+I SY C+ GD+I ++ K + + + + ++P ++ + + Sbjct: 117 IFINNSTVDIPSYNCELGDIITIRNTHKSKSIITKNINSFRKLEIPNHLIFDSTQLRGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQ---RVPCNWISLKINELLVVEYYSR 200 >gi|146261577|gb|ABQ15098.1| ribosomal protein S4 [Penthorum sedoides] Length = 196 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K RR+G K P G L Q R K S + ++L KQK++ +YG + Sbjct: 1 GPRFKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D+I K + K A + L+ ++P+++++ +I Sbjct: 116 RIVDIPSYRCKPRDIITAKDEQKSRAMIQNYLDLSPHEELPKHLTLQPFQYKGLVNQIID 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 KN---WVGLKINELLVVEYYSR 194 >gi|116670828|ref|YP_831761.1| 30S ribosomal protein S4 [Arthrobacter sp. FB24] gi|152060932|sp|A0JX91|RS4_ARTS2 RecName: Full=30S ribosomal protein S4 gi|116610937|gb|ABK03661.1| SSU ribosomal protein S4P [Arthrobacter sp. FB24] Length = 208 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ ++ ++ R +G L + + R YGPG HG+ RK + S + ++LR KQ++ Sbjct: 1 MANNTRARRTARLSRALGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG I E + F+EA R++G T NLI LE RLD +V RA F TI ARQ V H Sbjct: 61 RAQYG-IREAQMTRAFEEARRTKGLTGENLIELLEMRLDALVLRAGFARTIAQARQLVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174 RH+LV+G V+ S+R EG ++ V +S+ + A+ A RD VP Y+ V D Sbjct: 120 RHILVDGIRVDRPSFRVGEGQLVHVHSRSETMPPFQVAAAGAHRDVLPQVPAYLDVKLDA 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A VR P + PV + LVVEFY+R Sbjct: 180 LQARLVRRPKRSE---VPVTCEEQLVVEFYAR 208 >gi|295396094|ref|ZP_06806277.1| 30S ribosomal protein S4 [Brevibacterium mcbrellneri ATCC 49030] gi|294971035|gb|EFG46927.1| 30S ribosomal protein S4 [Brevibacterium mcbrellneri ATCC 49030] Length = 275 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++L+ KQ+++ YG I E Sbjct: 78 VRLSRALGLPLTPKAEKYFERRPYPPGEHGRARRRNDSDYSIRLKEKQRLRAQYG-IREA 136 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + +KEA + G T L+ LE RLD +V RA F TI ARQFV HRH+ V+G+ V Sbjct: 137 QMLKTYKEARKESGLTGEALVELLEMRLDALVLRAGFARTISQARQFVVHRHICVDGQRV 196 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR KEG +I V ++S+ + A+ A RD VP Y++VN + + AT +R P Sbjct: 197 DRPSYRVKEGQMIHVHERSQPMDPFQVAAAGAHRDVLPTVPGYLNVNLEALQATLLRRPK 256 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV LVVE YSR Sbjct: 257 REE---IPVTCDVQLVVEHYSR 275 >gi|222103464|gb|ACM44261.1| small ribosomal protein subunit 4 [Drepanocladus aduncus] Length = 202 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSPYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKSQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|110456685|gb|ABG74794.1| ribosomal protein S4 [Jasminum abyssinicum] Length = 203 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + + K RR+G KSP G L + R K S + ++L KQK+ Sbjct: 1 MPRYLGPRFKKIRRLGALPGLTNKSP----KAGSDLRKKPRSRKKSQYRIRLEEKQKLCF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG + + + + A +++G T L+ LE RLD I++R TI AARQ V+ RH Sbjct: 57 HYG-LRDYQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVHRRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 +LVNGR V+ SYRCK D+I K K + + + +++P +++++ Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLHPFQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199 >gi|306819785|ref|ZP_07453440.1| 30S ribosomal protein S4 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552154|gb|EFM40090.1| 30S ribosomal protein S4 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 192 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 14/206 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+++ + K+ RR G N+ G PK+ G + K S +G QL KQK+K Sbjct: 1 MARQRGPRFKVARRFGVNVCGHPKALK---------RGPKPTKKMSEYGKQLLEKQKLKA 51 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY + EK+F ++A +S+ + LI LE RLD I YR F +I ARQ VNH H Sbjct: 52 YYDVL-EKQFAKYVEDALKSQENPGEKLIIRLEMRLDNIAYRLGFGSSIRQARQIVNHGH 110 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I SY+ GD I +++KS+ + + +P Y+ + DN V Sbjct: 111 LLVNGKKVDIPSYKVSVGDTITLREKSRNTQLFKDNFAASNVTLP-YLQKDIDNYSGKVV 169 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ P+ + +L+VE+YS+ Sbjct: 170 SLPNR---EDVPIEITESLIVEYYSK 192 >gi|156598520|gb|ABU85518.1| ribosomal protein S4 [Passiflora biflora] Length = 198 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KSP ++ R + S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRF 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 54 HYG-LTERQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYRCK D+I VK + K + ++ R ++P ++ + Sbjct: 113 ILVNNRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKKYKGLV 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LV+E+YSR Sbjct: 173 TQIIDSK---CLGLKINELLVIEYYSR 196 >gi|49182748|gb|AAT57836.1| small ribosomal protein [Lethocolea glossophylla] Length = 195 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ +Y + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKAKSTY---IDHSTSNKKVSQYRIRLEEKQKLRFHYG-VTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ E RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GDVI VK K K + +++ L ++ VP +++ + + + + Sbjct: 117 VDIPSYNCEPGDVITVKDKQKSQSIIIKNIDLFQKSKVPSHLTFDPTELRGLVNQTINRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---LINLKINELLVVEYYSR 193 >gi|46486542|gb|AAS98707.1| ribosomal protein subunit 4 [Rhytidiadelphus triquetrus] gi|80974182|gb|ABB53784.1| small ribosomal subunit protein 4 [Rhytidiadelphus triquetrus] Length = 199 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|328541058|gb|AEB21753.1| ribosomal protein S4 [Kurzia brevicalycina] Length = 200 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKTLKQKSGY---NDRSTPNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE RLD ++R TI ARQ VNHRH+L+ Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD I +++K K + V + L + +P ++ + + + + Sbjct: 117 NNDIVDIPSYNCEPGDTITIREKQKSQSVVTKNINLFQNLKIPSHLIFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EFIDLKINELLVVEYYSR 197 >gi|294337154|emb|CAQ52727.1| ribosomal protein S4 [Homalia pennatula] Length = 202 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISQNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|163840724|ref|YP_001625129.1| 30S ribosomal protein S4 [Renibacterium salmoninarum ATCC 33209] gi|162954200|gb|ABY23715.1| SSU ribosomal protein S4P [Renibacterium salmoninarum ATCC 33209] Length = 223 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 11/209 (5%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++R +I R +G L + + R YGPG HG+ RK + S + ++LR KQ+++ Sbjct: 22 ARRT---VRISRALGIALTPKAAKYLERRPYGPGEHGRARKKQDSDYAVRLREKQRLRAQ 78 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG I E + +F+EA R++G T NL+ LE RLD +V RA F TI ARQ V HRH+ Sbjct: 79 YG-IREAQMTRVFEEARRTKGLTGENLVELLEMRLDALVLRAGFARTIAQARQLVVHRHI 137 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVA 177 +V+G V+ S+R EG +I V +S+ +A + A+ A RD VP Y+ V + + A Sbjct: 138 MVDGARVDRPSFRVGEGQLIHVHPRSEVMAPLQVAAAGAHRDVLPAVPGYLDVKLEGLQA 197 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + PV + LVVEFY+R Sbjct: 198 RLVRRPKRTE---VPVTCEEQLVVEFYAR 223 >gi|328541142|gb|AEB21795.1| ribosomal protein S4 [Telaranea lawesii] Length = 200 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSPSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD + R PTI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMAPTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C GD I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCGPGDRITIRDKQKSRSIITKNVNLFQNVKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|9651819|gb|AAF91286.1|AF234158_1 ribosomal protein subunit 4 [Dicranum scoparium] Length = 199 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I ++ + K A +++ +++ +P +++ + +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|26399116|sp|P59148|RR4_LOPST RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504355|emb|CAC81022.1| small ribosomal protein 4 [Lopidium struthiopteris] Length = 203 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G KS + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 59 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D I +K K K + + + +L ++ + +++ + Sbjct: 118 ILVNGYIVDIPSYRCKPQDFITIKNKQKYESIISKNIELYQKSKIANHLTYSSLEKKGLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 178 NQI---LDRESIGLKINELLVVEYYSR 201 >gi|3098186|gb|AAC15541.1| small ribosomal protein 4 [Mnium hornum] Length = 199 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 NDHLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|294337124|emb|CAQ52712.1| ribosomal protein S4 [Glossadelphus ogatae] Length = 202 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LV E+YSR Sbjct: 177 NQI---LDRESIGLKINELLVXEYYSR 200 >gi|157689468|gb|ABV65290.1| ribosomal protein S4 [Elaeocarpus angustifolius] Length = 195 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G G Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTSKRP----RIGSGFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 ERQLLKYVRIAGKAKGSTGRILLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K + K A + A ++P++++++ +I S Sbjct: 116 IVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSSAHEELPKHLTLHPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLKINELLVVEYYSR 193 >gi|77862551|gb|ABB04548.1| small ribosomal protein 4 [Plagiochasma wrightii] Length = 201 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N ++I SY CK D I +K + K + + + ++ +P +++ + ++ Sbjct: 117 LINNNPIDIPSYNCKPKDTITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLMHVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|26399110|sp|P59145|RR4_HYPLA RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504361|emb|CAC81024.1| small ribosomal protein 4 [Hypopterygium laricinum] Length = 202 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D I +K + K A + + + ++ +P +++ + Sbjct: 117 ILVNGYIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 177 NQILNRK---SIGLKINELLVVEYYSR 200 >gi|222103492|gb|ACM44275.1| small ribosomal protein subunit 4 [Sanionia uncinata] Length = 203 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 4 RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 60 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+L Sbjct: 61 G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 120 VNNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 180 I---LNRESIGLKINELLVVEYYSR 201 >gi|294337116|emb|CAQ52708.1| ribosomal protein S4 [Forsstroemia trichomitria] Length = 202 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPCVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|227875432|ref|ZP_03993573.1| ribosomal protein S4 [Mobiluncus mulieris ATCC 35243] gi|269977316|ref|ZP_06184289.1| ribosomal protein S4 [Mobiluncus mulieris 28-1] gi|306818743|ref|ZP_07452465.1| 30S ribosomal protein S4 [Mobiluncus mulieris ATCC 35239] gi|307701146|ref|ZP_07638171.1| ribosomal protein S4 [Mobiluncus mulieris FB024-16] gi|227843986|gb|EEJ54154.1| ribosomal protein S4 [Mobiluncus mulieris ATCC 35243] gi|269934619|gb|EEZ91180.1| ribosomal protein S4 [Mobiluncus mulieris 28-1] gi|304648429|gb|EFM45732.1| 30S ribosomal protein S4 [Mobiluncus mulieris ATCC 35239] gi|307614141|gb|EFN93385.1| ribosomal protein S4 [Mobiluncus mulieris FB024-16] Length = 206 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R ++ R +G L + K R YGPG HG+ R+ S + ++L+ KQ+++ Sbjct: 1 MANRSRKMVRLSRSLGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y I E + F+EA R G T NLI+ LE RLD +V RA F T+F ARQ V HRH Sbjct: 61 QYA-IREAQLVKSFQEALRMEGRTGDNLITLLEQRLDALVLRAGFGRTMFQARQIVTHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176 +LV+G+ V+ SYR + G ++VK S+ + A++ + RD VP+Y+SV+ + + Sbjct: 120 ILVDGKIVDRPSYRVRPGQTVQVKPSSQVKDPFVVAARGSHRDVLPAVPDYLSVDLEKLR 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T R+P + PV LVVE+YSR Sbjct: 180 FTLNRVPKRDE---VPVQCDVQLVVEYYSR 206 >gi|67035698|gb|AAY62780.1| small ribosomal protein subunit 4 [Dryptodon patens] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + +++ ++ +P +++ N +I Sbjct: 117 NNCIVNIPSYRCKPQDFITIKDRQKSKSMIIKNMDFYQKYKIPNHLTFNSLENKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197 >gi|67035558|gb|AAY62710.1| small ribosomal protein subunit 4 [Astomiopsis kieneri] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P+ S+ + K S + ++L KQK++ +YG Sbjct: 2 RGPRVRIIRRLGILPGLTNKTPLLKSSFT---NQSTSNKKISQYRIRLEEKQKLRFHYG- 57 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNH+H+LVN Sbjct: 58 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHKHILVN 117 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ + +++ VP +++ N +I Sbjct: 118 DRIVNIPSYRCKPQDFITIKARQKSRAMIIKNVEFSQKSKVPNHLTFNSLEKKGLINQI- 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 --LDQESIGLKINELLVVEYYSR 197 >gi|67035640|gb|AAY62751.1| small ribosomal protein subunit 4 [Serpotortella chenagonii] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ YYG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R +NI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NNRIINIPSYRCKPQDFITIKDRQKYQAMIIKNLDFSQKTKIPNHLTFNSLEKNGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|328541066|gb|AEB21757.1| ribosomal protein S4 [Kurzia helophila] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ Y K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTTKTLKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T + LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD+I +++K K + + + L + +P +++ + + + + Sbjct: 117 NDIVDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSIDQTI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---ESIDLKINELLVVEYYSR 196 >gi|150251467|ref|YP_001312200.1| ribosomal protein S4 [Cycas taitungensis] gi|172048625|sp|A6H5H5|RR4_CYCTA RecName: Full=30S ribosomal protein S4, chloroplastic gi|149941517|dbj|BAF64941.1| ribosomal protein S4 [Cycas taitungensis] Length = 201 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P +R+ R+ S + ++ KQK++ Sbjct: 1 MSRYRGPRLKIIRRLRTLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVN R V+I SYRCK DVI + + + A + + L+++D +P +++++ Sbjct: 116 ILVNDRVVDIPSYRCKPRDVITIIDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|63191647|gb|AAY34785.1| small ribosomal protein subunit 4 [Leskeadelphus bolivianus] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|270300653|gb|ACZ69405.1| ribosomal protein S4 [Radula grandis] Length = 202 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTLKPKSSY---IDRSISNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A +G T LI LE RLD ++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNMKGSTGQVLIQLLEMRLDNTIFCLGMTPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +++N +VNI SY C+ GD+I ++ + K + ++ ++P +++ + + Sbjct: 117 IVINNHTVNIPSYNCELGDIITIRNRHKSKLIITRNINSVQKLEIPNHLTFDATQLRGLI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 177 NQ---RIDCNSISLKINELLVVEYYSR 200 >gi|77862513|gb|ABB04529.1| small ribosomal protein 4 [Athalamia hyalina] Length = 200 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ Y ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTNKTLKLKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A +++G T L+ LE RLD IV+R PTI ARQ +NH H+L Sbjct: 58 G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLINHPHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY CK DVI +K + K + + + ++ +P +++ + + + Sbjct: 117 INNNMVDIPSYNCKPKDVISIKDRPKSQSIITKNLNYFQKQKIPNHLTFDLMQVKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 IIDR---EWIFLKINELLVVEYYSR 198 >gi|328541172|gb|AEB21810.1| ribosomal protein S4 [Telaranea martinii] Length = 200 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I ++ K K + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDLITIRDKQKSRSIITRNVNLFQNLKIPSHLAFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197 >gi|328541164|gb|AEB21806.1| ribosomal protein S4 [Lepidozia bisbifida] Length = 198 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ +Y K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGAPPGLTSKTLKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCEPGDIITIRDKQKSRSIIAKNVSLFQNLKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|228016849|gb|ACP51675.1| ribosomal protein S4 [Pinus attenuata] Length = 201 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDP----MNRSSSRKISQYRIRLEEKQKLRY 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E+ + A R++G T L+ LE LD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERHLLKYVRIARRAKGSTGQVLLQLLEMCLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A+ + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRANNKKNIDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|77019195|emb|CAH60203.1| chloroplast 30S ribosomal protein S4 [Grimmia pilifera] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NNRIVNIASYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197 >gi|290968692|ref|ZP_06560230.1| ribosomal protein S4 [Megasphaera genomosp. type_1 str. 28L] gi|290781345|gb|EFD93935.1| ribosomal protein S4 [Megasphaera genomosp. type_1 str. 28L] Length = 195 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R ++ K RR G N++G PK+ + +R+ K S +G QL KQK++ Sbjct: 1 MATRREARFKQCRRFGLNVYGHPKALKRVKKE-------QRQKKMSEYGTQLLEKQKLRA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY ++ E++F + +A + G T N++ LE RLD IVYR F +I ARQ VNH H Sbjct: 54 YY-NLLERQFVRYYDKAKKMDGVTGENMLKLLECRLDNIVYRIGFANSIRQARQMVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ +I S K G V+ +K+ S+ ++ Q + YI N D T Sbjct: 113 ILVNGKRCDIPSAHVKVGSVLTLKEASRDNEMYKKSFQELKTFDVPYIEKNFDGFEGTLT 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + PV + L+VE YS+ Sbjct: 173 RMPERDE---IPVEINETLIVELYSK 195 >gi|253729559|ref|YP_003029742.1| ribosomal protein S4 [Bambusa oldhamii] gi|255961385|ref|YP_003097578.1| ribosomal protein S4 [Dendrocalamus latiflorus] gi|246367069|gb|ACS94680.1| ribosomal protein S4 [Bambusa oldhamii] gi|255040262|gb|ACT99922.1| ribosomal protein S4 [Dendrocalamus latiflorus] Length = 201 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN R V+I S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNRRIVDIPSFRCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199 >gi|307683593|dbj|BAJ19775.1| ribosomal protein S4 [Larix decidua] Length = 201 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE R D I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK D I ++ + + + + L +RD +P +++ N Sbjct: 116 IRVNDHMVDIPSYPCKPQDEITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|330850892|ref|YP_004376642.1| 30S ribosomal protein S4 [Fistulifera sp. JPCC DA0580] gi|328835712|dbj|BAK19008.1| 30S ribosomal protein S4 [Fistulifera sp. JPCC DA0580] Length = 205 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 6/208 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN-TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 MS+ K KI RR+G K R G K + +G++L KQK+K Sbjct: 1 MSRYRGPKLKITRRLGTLPGLTTKKSNKINRPGKDGNANADTGKKLTEYGVRLEEKQKLK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE + KEA R +G T L+ LE RLDT+ + F T+ ARQ VNH Sbjct: 61 FNYG-LSESQLFRYVKEARRRQGVTGLILLQLLEMRLDTLCFTLGFAKTMAQARQLVNHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVAT 178 H+ VN + VNI S++C+ D+I VK+++ V +P ++ + + + AT Sbjct: 120 HITVNKKVVNIPSFQCRLNDIISVKEQTSSKVLVENNLKDRQSNTIPAHLKFDQNKLEAT 179 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LV+E YSR Sbjct: 180 VMDYCDRDDVI---LQLDELLVIEHYSR 204 >gi|67035604|gb|AAY62733.1| small ribosomal protein subunit 4 [Campylopodium euphorocladum] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + +++ VP +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDCITIKDRQKSQAMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIDLKINELLVVEYYSR 197 >gi|67036100|gb|AAY62976.1| small ribosomal protein subunit 4 [Rauiella lagoensis] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGDILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDYITIKNQQKSETIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63191734|gb|AAY34827.1| small ribosomal protein subunit 4 [Hedwigidium integrifolium] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKSKIPNHLTYNSLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRELIGLKINELLVVEYYSR 197 >gi|289422683|ref|ZP_06424523.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L] gi|289156862|gb|EFD05487.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L] Length = 201 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 9/202 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 K K+ RR+G N+ G PK+ G R K S +G+QL KQ+++ YYG Sbjct: 6 RGPKFKLSRRLGLNVCGHPKAM-----NRAGKGTARSDKKLSPYGMQLLEKQRLRAYYG- 59 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 +SEK+ R K+A +++G T +I LE RLD +VYR +I ARQ V H ++ VN Sbjct: 60 VSEKQMRIYMKKAQKAKGPTGIAVIRTLECRLDNLVYRMGLANSIRQARQMVGHGNIHVN 119 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184 GR VNI S+ GD I +++K + + A + Y++ + N A R+P Sbjct: 120 GRKVNIPSFIVSVGDEISLREKYRTNELFKANFEAAALNEHPYLTKDQANYSAVLTRLPE 179 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +LVVEFYS+ Sbjct: 180 REE---VPIEINDSLVVEFYSK 198 >gi|67035968|gb|AAY62910.1| small ribosomal protein subunit 4 [Porotrichum longirostre] Length = 199 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|256371242|ref|YP_003109066.1| ribosomal protein S4 [Acidimicrobium ferrooxidans DSM 10331] gi|256007826|gb|ACU53393.1| ribosomal protein S4 [Acidimicrobium ferrooxidans DSM 10331] Length = 208 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ ++ RR L+ + K P+ PG HG+ R+ +PS + +QLR Sbjct: 1 MARYTGPVCRLCRRERTKLFLKGPKCMSAKCPITQGRVPPGQHGRDRQRQPSEYAIQLRE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ+ ++ YG + K+F+ +++A R G T NL++ LE RLD +V+RA + + ARQ Sbjct: 61 KQRARRTYGVMG-KQFQRFYRDAARRSGITGENLLALLELRLDNVVFRALWGSSRAQARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 V H HVLV+G+ V+I SYR + G V+ + K++ L + + R+VP ++ V Sbjct: 120 LVRHGHVLVDGQRVDIPSYRLRPGQVVTLNPKARDLDIIAFNREHLTREVPAWLEVTDGG 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P + ++ L+VE +S+ Sbjct: 180 SGVRVLSVPLRDQ---IDTEVREQLIVELFSK 208 >gi|37992475|gb|AAR06416.1| small ribosomal protein 4 [Cyathophorum bulbosum] Length = 199 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMFPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 NG V+I SY+CK D I +K + K A + + + ++ +P +++ N+ +I Sbjct: 117 NGSIVDIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|26399114|sp|P59147|RR4_LOPCO RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504357|emb|CAC81027.1| small ribosomal protein 4 [Lopidium concinnum] Length = 203 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G +S + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNRSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 59 HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D I +K K K + + + + ++ + +++ + Sbjct: 118 ILVNGYIVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 178 NQI---LDRESIGLKINELLVVEYYSR 201 >gi|328541050|gb|AEB21749.1| ribosomal protein S4 [Chloranthelia berggrenii] Length = 199 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE R D + R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I +++K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197 >gi|26399104|sp|P59142|RR4_HYPCP RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504371|emb|CAC80630.1| small ribosomal protein 4 [Hypnum cupressiforme] Length = 202 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD + +R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVTFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|29422405|gb|AAO84598.1| small ribosomal protein 4 [Breutelia chrysocoma] Length = 200 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 2 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 59 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 118 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198 >gi|157689540|gb|ABV65326.1| ribosomal protein S4 [Plumbago auriculata] Length = 201 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L + R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----RVGTDLRNRSRSRKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ F+ A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 57 HYG-ITERQLLKYFRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I SYRCK D+I ++K A V + + +P++++++ Sbjct: 116 ILVNGRIVDIPSYRCKRQDIIMAREKKNSRALVQNYLDSSPPEKLPKHLTLHPFPHKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + + LVVE+YSR Sbjct: 176 NQIIDNK---WFGLKINELLVVEYYSR 199 >gi|289706213|ref|ZP_06502576.1| ribosomal protein S4 [Micrococcus luteus SK58] gi|289557052|gb|EFD50380.1| ribosomal protein S4 [Micrococcus luteus SK58] Length = 208 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 11/209 (5%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++R + R +G L + + + R YGPG HG+ R+ + S + ++L+ KQ+++ Sbjct: 7 TRRT---VRHSRALGIALTPKAEKYMERRPYGPGQHGRARRKQDSDYAVRLKEKQRLRAQ 63 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 Y +I E + R F+EA R+ G T NL+ LE RLD +V RA F TI ARQ V HRH+ Sbjct: 64 Y-NIREAQMRRYFEEAKRTAGLTGENLVELLEQRLDALVLRAGFARTIQQARQLVVHRHI 122 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVA 177 LV+G+ V+I S+R KEG +I V ++S+++ A+ A + V P Y++V D + A Sbjct: 123 LVDGKRVDIPSFRVKEGQMIHVHERSEKMVPFQLAAAGAHQQVLPATPGYLTVEIDKLRA 182 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T R P + PV + LVVE+Y+R Sbjct: 183 TLTRRPKRSE---VPVTCEEQLVVEYYAR 208 >gi|116010535|emb|CAL38871.1| ribosomal protein S4 [Shepherdia sp. IND] Length = 194 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L K+K++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKKP----RAGSDLRNQSRPIKKSQYRIRLEEKEKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+ VNGR Sbjct: 56 QQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHIFVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I VK++ K A V A R ++P++++++ +I S Sbjct: 116 VDIPSYRCKPRDIITVKEEQKSRALVQNYLDSASREELPKHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|49182740|gb|AAT57832.1| small ribosomal protein [Lepicolea ochroleuca] Length = 195 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKLIRRLGALPGLTSKTLKPKSSY---IDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQNLKIPSHLTFDSTKLCGSITQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWITLKINELLVVEYYSR 193 >gi|224178096|ref|YP_002600908.1| ribosomal protein S4 [Pyramimonas parkeae] gi|215882763|gb|ACJ71136.1| ribosomal protein S4 [Pyramimonas parkeae] Length = 226 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ + +I RR+GE K ++ + PG HG K S + ++LR KQK++ Sbjct: 25 MSRYRGPRLRIVRRLGELPGFTRK--LSKKENPPGQHGASLSNKKSSQYSIRLREKQKLR 82 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I+E++ + K+A RS+G + L+ LE RLD I++R PT+ AARQ V+H Sbjct: 83 YNYG-ITERQLLNYMKKARRSKGSSGEILLKLLEMRLDNIIFRLGMAPTVLAARQLVSHG 141 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LVN SV+I SY C+ D+I VK SK+L + +PE+++ + Sbjct: 142 HILVNQNSVDIPSYLCRPKDIISVKASSKKLVENFLEITNID-SLPEHLTFTKSTLNGEI 200 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LV+E+YSR Sbjct: 201 KSIVQRS---WISLKIDELLVIEYYSR 224 >gi|331269808|ref|YP_004396300.1| 30S ribosomal protein S4 [Clostridium botulinum BKT015925] gi|329126358|gb|AEB76303.1| ribosomal protein S4 [Clostridium botulinum BKT015925] Length = 197 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ S R K S +G+QL KQK++ Sbjct: 1 MAKIRQPRFKLSRRLGVNIYGHPKAMKRAESTR-----ANRNKKISDYGIQLLEKQKIRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F+ ++A +S+ T L+ LE RLD IVYR F +I ARQ VNH + Sbjct: 56 YYG-VMEKQFKRYVEKAMKSKEVTGEVLLKLLECRLDNIVYRIGFANSIRQARQMVNHGY 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 +LVNG+ V+I SY+ K GD++++K K + +L ++P YI N+D+ Sbjct: 115 ILVNGKKVDIPSYQVKVGDIVKLKDKYTNNQMFSDNFLELRTFELP-YIEKNYDDFSGKL 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R+P + P+ + VVE YS+ Sbjct: 174 LRLPERDE---LPIEVNEVAVVELYSK 197 >gi|67035761|gb|AAY62811.1| small ribosomal protein subunit 4 [Sehnemobryum paraguense] Length = 201 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+P S + K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVKIIRRLGVLPGLTNKTPQLKSSPA---NQSTSNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++ Sbjct: 59 G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTISGARQLVNHRHII 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K + + ++ +P +++ N + Sbjct: 118 VNNRIVNIPSYRCKPQDFITIKNRQKSQDIITKNINFNQKYKIPNHLTYNSLEKKGFVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 178 I---LDRELINLKINELLVVEYYSR 199 >gi|293363785|ref|ZP_06610526.1| ribosomal protein S4 [Mycoplasma alligatoris A21JP2] gi|292552651|gb|EFF41420.1| ribosomal protein S4 [Mycoplasma alligatoris A21JP2] Length = 199 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K RR+G ++ K + R+Y PG HG +R K S +GL L KQK+ Sbjct: 1 MARYTGPVFKKSRRLGYSILETGKEFAKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K +G +SEK+ R + +A + +G T NL+ LESRLD +VYRA F T ARQ VNH Sbjct: 60 KYVFG-VSEKQLRKAYVKATKLKGITGTNLLQVLESRLDNLVYRAGFAQTRRQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H LV+G+ +I S K G V+ +K+ K +V LA + +++ + Sbjct: 119 NHFLVDGKKADIPSMSIKLGSVVTLKE--KTQKNVQVTDALANKPAAAWLT--RKDFTVK 174 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + V ++ L+VE+Y++ Sbjct: 175 FDRLPERNE---MHVEIKDALIVEYYAK 199 >gi|49182724|gb|AAT57824.1| small ribosomal protein [Herzogobryum teres] Length = 195 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G + K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGASPGLTSKTLKSKSSY---IDRSASNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH H+ VN + Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMTPTIPGARQLVNHGHISVNNDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ + + +++ + L ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNRQRSQSTITKNLNLFQKSKIPSHLTFDLTQLQGSVNQMVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|63191649|gb|AAY34786.1| small ribosomal protein subunit 4 [Lindbergia brachyptera] Length = 199 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|11878079|gb|AAG40787.1| small ribosomal protein 4 [Buxbaumia aphylla] Length = 200 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P Y + K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + A ++G T L+ E RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLKYVRIARGAKGSTGQILLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SYRCK D I +K K + + +L+++ +P +++ N + Sbjct: 117 VNNNIVNIPSYRCKPQDFITIKNSQKSQTIITKNIELSQKYKIPNHLTFNSLEKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|12642228|gb|AAK00196.1| rps4 [Physcomitrella patens] Length = 194 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S Q K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN Sbjct: 56 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I VK + K A + + +++ VP +++ + +I L Sbjct: 116 VDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---L 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 DRESIGLKINELLVVEYYSR 192 >gi|108759189|ref|YP_634922.1| 30S ribosomal protein S4 [Myxococcus xanthus DK 1622] gi|122980658|sp|Q1CXF1|RS4B_MYXXD RecName: Full=30S ribosomal protein S4 B gi|108463069|gb|ABF88254.1| ribosomal protein S4 [Myxococcus xanthus DK 1622] Length = 210 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 10/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ + K+ RR+G L K PV R Y PG HG ++ S F +LR K Sbjct: 1 MARDLGPRGKMCRRLGIPLSRITAKDPDKDPVLRRPYPPGQHGATARTSVSDFARRLREK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K YYG + EK+ R++F+EA R+ G+T L+ LESRLD++V RA +I ARQF Sbjct: 61 QKLKLYYG-LMEKQCRAVFQEASRAPGNTGTVLLQLLESRLDSLVLRAGLATSIRQARQF 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDN 174 V H ++ V+G+ +I S+R K G + ++LA V E+ S++ R VP Y+ V + Sbjct: 120 VRHGYLHVDGKRADIPSFRVKPGSEVRFHAAHQKLAVVQESFSRMKSRSVPAYVQVLGEG 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +VR+P + PV + +VE+Y Sbjct: 180 EGLRYVRLPEREE---IPVDVNEPFIVEYY 206 >gi|108773272|ref|YP_635720.1| ribosomal protein S4 [Chara vulgaris] gi|122231313|sp|Q1ACM7|RR4_CHAVU RecName: Full=30S ribosomal protein S4, chloroplastic gi|77157928|gb|ABA61969.1| ribosomal protein S4 [Chara vulgaris] Length = 206 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPS--YFGLQLRAKQKM 58 MS+ + KI RR+G L G + ++S G S + ++L KQK+ Sbjct: 1 MSRYRGPRLKIVRRLG-PLPGFTQKLYKSKSQYLGSSTTSSSSNKKISQYNIRLLEKQKL 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YYG ++E++ A ++G T L+ LE RLD IV+R PTI AARQ VNH Sbjct: 60 RFYYG-LTERQLLKYVTIARNAKGPTGQVLLQLLEMRLDNIVFRLGMAPTIPAARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNMVA 177 RH+LVN +VNI SY CK GD I V+++ + ++ ++Q A VP ++++N Sbjct: 119 RHILVNDFTVNIPSYSCKLGDKISVQKRFESKTNIFANSTQSASLKVPSHLTLNPAKNEG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + LVVE+YSR Sbjct: 179 LVHQIVDR---EFIGAKINELLVVEYYSR 204 >gi|67036112|gb|AAY62982.1| small ribosomal protein subunit 4 [Mittenothamnium reptans] Length = 199 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E+RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLXLPETRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQQKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|225076419|ref|ZP_03719618.1| hypothetical protein NEIFLAOT_01464 [Neisseria flavescens NRL30031/H210] gi|224952267|gb|EEG33476.1| hypothetical protein NEIFLAOT_01464 [Neisseria flavescens NRL30031/H210] Length = 173 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 6/175 (3%) Query: 33 GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92 PG HG +K + S +GLQLR KQK+++ YG + E++FR F EA R +G T L+ L Sbjct: 4 APGQHGA-KKPRLSDYGLQLREKQKIRRIYGVL-ERQFRRYFAEAARRKGSTGELLLQLL 61 Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 ESRLD +VYR F T ARQ V+H+ ++VNG+ VNI S++ K GDV+ V++K+K+ Sbjct: 62 ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVAVREKAKKQVR 121 Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + EA LA + +P ++SV+ D + F +P + + LVVEFYS+ Sbjct: 122 IQEALSLATQIGLPSWVSVDADKLEGVFKNMPDRSE---LSGDINEQLVVEFYSK 173 >gi|78369625|gb|ABB43042.1| ribosomal protein 4 [Calymperes schmidtii] Length = 199 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRLKIIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY+CK + I +K + K +++ + + +P +++ N +I Sbjct: 117 NNRIVNIPSYQCKPQEFITIKNQQKYQTMIIKNENFSPKYKIPSHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|3098198|gb|AAC15547.1| small ribosomal protein 4 [Leptobryum pyriforme] Length = 199 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFIIIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|222103536|gb|ACM44297.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum] Length = 202 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 4 YRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 60 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 61 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 119 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + + + ++ +P +++ N N +I Sbjct: 120 NDRLVDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI 179 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 180 LDRD---SIDLKINELLVVEYYSR 200 >gi|49182700|gb|AAT57812.1| small ribosomal protein [Diplophyllum albicans] Length = 195 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N + Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNNT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPNHLTFDLTQLQGSVNQMVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|311894846|dbj|BAJ27254.1| putative ribosomal protein S4 [Kitasatospora setae KM-6054] Length = 204 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 106/209 (50%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ ++ K KI R +G L + R Y PG HG+ RK + ++L KQ+++ Sbjct: 1 MANQKRPKVKIARALGVPLTPKSVKYFEARPYPPGQHGRGRKQNS-DYKVRLTEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SEK+ F+ A + G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-LSEKQMARAFEAAKKIEGKTGEALVGLLEVRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG VN S++ K G V+ VK+KSK+ A + E P+Y+ VN + Sbjct: 119 IEVNGAKVNKPSFQLKPGYVVTVKEKSKEKVPFQVAREGGNAGEGQTPKYLEVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + PV+ LVVE+YSR Sbjct: 179 RLDRAPQRRE---VPVVCDEQLVVEYYSR 204 >gi|284799892|ref|ZP_05985156.2| ribosomal protein S4 [Neisseria subflava NJ9703] gi|284796551|gb|EFC51898.1| ribosomal protein S4 [Neisseria subflava NJ9703] Length = 173 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 74/175 (42%), Positives = 109/175 (62%), Gaps = 6/175 (3%) Query: 33 GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92 PG HG +K + S +GLQLR KQK+++ YG + E++FR F EADR +G T L+ L Sbjct: 4 APGQHGA-KKPRLSDYGLQLREKQKIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLL 61 Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 ESRLD +VYR F T ARQ V+H+ ++VNG+ VNI S++ K GDV+ V++K+K+ Sbjct: 62 ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVAVREKAKKQVR 121 Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + EA LA + +P ++SV+ D + F +P + + LVVEFYS+ Sbjct: 122 IQEALSLATQIGLPSWVSVDADKLEGVFKNMPDRSE---LSGDINEQLVVEFYSK 173 >gi|49182815|gb|AAT57869.1| small ribosomal protein [Trichocolea tomentosa] Length = 195 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNEI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDTITIRNKQKSQSMITKNINLFQKLKIPSHLTFDLTQLQGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|283458017|ref|YP_003362625.1| 30S ribosomal protein S4 [Rothia mucilaginosa DY-18] gi|283134040|dbj|BAI64805.1| ribosomal protein S4 [Rothia mucilaginosa DY-18] Length = 210 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 10/212 (4%) Query: 1 MSK--RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K R + R +G L + + + R YGPG HG+ RK S + QL+ KQ++ Sbjct: 1 MAKHNRTRRTVRQSRALGIALTPKAEKYLERRPYGPGQHGRARKKADSNYATQLKEKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y +I E + R + EA R+ G T N++ LE+RLD +V RA F TI ARQ V H Sbjct: 61 RAQY-NIREAQMRRAYLEAKRTEGQTGKNMVELLETRLDALVLRAGFARTIAQARQMVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYISVNHDN 174 RH++V+G V+ S+ K G +I V K+++ A A+ + +VP Y++V + Sbjct: 120 RHIMVDGVRVDRPSFHVKPGQLIHVHPKAEKTAPFQAAAAGEHQAVLPEVPAYLNVEIEK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A R P + PVI LVVE+YSR Sbjct: 180 LHAKLERKPKREE---IPVICDEQLVVEYYSR 208 >gi|157689538|gb|ABV65325.1| ribosomal protein S4 [Phyllanthus calycinus] Length = 195 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGTLPGLTSKKP----RAGSDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNH+H+LVNGR Sbjct: 56 ERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHKHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K + K A + + ++++P +++++ + +I S Sbjct: 116 IVDIPSYRCKPRDIITAKNEQKSRAMIQNYLDSSPQQELPNHLTLHSIHYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLKINELLVVEYYSR 193 >gi|46947049|gb|AAT06757.1| ribosomal protein subunit 4 [Dendro-hypnum subspininervium] Length = 200 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G L K+ S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K + K A + + ++ +P +++ + + Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + L+VE+YSR Sbjct: 177 I---LDRESIGLKINELLIVEYYSR 198 >gi|328541168|gb|AEB21808.1| ribosomal protein S4 [Telaranea lindenbergii] Length = 197 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ SY K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNVKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|322719527|gb|ADX07700.1| small ribosomal protein subunit 4 [Bucklandiella sudetica] Length = 198 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ + +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIEFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|110456762|gb|ABG74849.1| ribosomal protein S4 [Menodora longiflora] Length = 213 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 11/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSY----GPGLHGQRRKSKPSYFGLQLRAKQ 56 M + + K RR+G K P +S G G Q R K S + ++L KQ Sbjct: 1 MPRYRGPRLKKIRRLGALPGLTNKRPKRPKSPNDKDGSGRRKQTRSRKKSQYRIRLEEKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+ +YG + E + + A +++G T L+ LE RLD I++R TI AARQ V Sbjct: 61 KLCFHYG-LREYQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHD 173 NH H+LVNGR V+ SYRCK D+I K K + + L+ ++ +P ++++ Sbjct: 120 NHSHILVNGRIVDRSSYRCKPQDIILTKDTQKSRTLIQNSLTLSFLKKKKLPFHLTLQPS 179 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I S + + + LVVE+YSR Sbjct: 180 QYKGLVKEIVDSKR---VGLKINELLVVEYYSR 209 >gi|146261545|gb|ABQ15082.1| ribosomal protein S4 [Paeonia brownii] Length = 196 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K RR+G K P L Q R K S + ++L KQK++ +YG + Sbjct: 1 GPRFKKIRRLGALPGLTSKRP----RATGDLRNQLRSGKRSQYRIRLEEKQKLRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ +E RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 TERQLLKYVRIAGKAKGSTGQVLLQLIEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D+I K + + A + L+ ++P++++++ +I Sbjct: 116 RIVDIPSYRCKPQDIITAKDEKQSRALIQNYLDLSPHAELPKHLTLHPFEYKGLVNQIID 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 SK---WVSLQINELLVVEYYSR 194 >gi|46811044|gb|AAT01840.1| small ribosomal protein 4 [Porella navicularis] Length = 197 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRLKIIRRLGALPGFTAKTLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ LE RLD ++ TI ARQ VNH+H+ +N Sbjct: 57 TERQLLKYVRTARNAKGSTGQILLQLLEMRLDNTIFCLGMASTIPGARQLVNHKHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +V+I SY C+ GD+I ++ + K + + L ++ ++P +++ + + + ++ + Sbjct: 117 DTVDIPSYNCEPGDIITIRNREKSQSIITRNINLFQKLEIPNHLTFDSTQLRGSVNQMIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKVNELLVVEYYSR 195 >gi|67035690|gb|AAY62776.1| small ribosomal protein subunit 4 [Ochrobryum gardneri] Length = 199 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ + + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + + + + +++ VP +++ N +I Sbjct: 117 NNYIVNIPSYRCKPQDFITIKNRQKSQSIIAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + + LVVE+YSR Sbjct: 177 ---LNNESIGLKINELLVVEYYSR 197 >gi|86438872|emb|CAJ55416.1| small ribosomal protein 4 [Plagiochila acanthocaulis] Length = 196 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCELGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVE 202 ++ + + + LVVE Sbjct: 177 NQMINR---EWINLKINELLVVE 196 >gi|157689452|gb|ABV65282.1| ribosomal protein S4 [Coriaria nepalensis] Length = 195 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S + ++L KQK++ +YG I+ Sbjct: 1 PRFKKIRRLGALPGLTSKRP----RTGSDLKNQPRSGKKSQYRIRLEEKQKLRFHYG-IT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGC 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K + K + + ++P++++++ +I S Sbjct: 116 IVDIPSYRCKPRDIITAKDEQKSRTLIQNYLDSSPHEELPKHLTLHPVQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLKINELLVVEYYSR 193 >gi|119029437|gb|ABL59934.1| ribosomal protein S4 [uncultured bacterium] Length = 210 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 14/215 (6%) Query: 1 MSKRESSKHKIDRRIGENLWG----RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ + +++RR +L P+ + PG HG R+SK S +G Q RAKQ Sbjct: 1 MARDLGPRGRLERREQHDLSLFSGVSPRDNKIKTAVVPGQHG-TRRSKLSDYGKQFRAKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+ YG + E++FR+ F+ A + G T NL+ LE RLD IVYR+ F T ARQ V Sbjct: 60 LAKRIYGVL-ERQFRNYFRYASKRNGPTGENLLRLLECRLDNIVYRSGFARTRKEARQLV 118 Query: 117 NHRHVLVNG----RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVN 171 +H+ ++VN R VNI SY+ K D I V++K + V EA LA+ R PE+I + Sbjct: 119 SHKGIVVNDGKNIRVVNIPSYQIKPEDEIFVREKCRDQGRVREALDLAQKRTTPEWIETD 178 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 H N R+P + P+ + L+VE YS+ Sbjct: 179 HLNFKGVIKRLPERDE---MPLEIAELLIVELYSK 210 >gi|320103641|ref|YP_004179232.1| 30S ribosomal protein S4P [Isosphaera pallida ATCC 43644] gi|319750923|gb|ADV62683.1| SSU ribosomal protein S4P [Isosphaera pallida ATCC 43644] Length = 209 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 13/214 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M + ++ RR G L+ + PK + R PG+H Q R+ K S + +LR Sbjct: 1 MGRYTGPVCRLCRREGIKLYLKGTRCDSPKCAIERRQTVPGMH-QTRRGKASEYAKRLRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+YYG + E++FR + EA+R G+T L++ LE RLD +V R F + ARQ Sbjct: 60 KQKVKRYYG-VYERQFRKYYAEANRLPGNTGERLMALLERRLDNVVTRLGFAISRPQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYIS-VNH 172 ++H H+LVNGR ++I SY + G+ I +K + + Q VP+++ ++ Sbjct: 119 LISHGHILVNGRKLDIPSYLVRAGESITLKDREHSRRVTSDNLHQENLPAVPDWLERISE 178 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D R+PS +D+ PV QP L+VE SR Sbjct: 179 DPPEGRVSRLPS-AQDISLPV--QPQLIVELLSR 209 >gi|46810994|gb|AAT01815.1| small ribosomal protein 4 [Blasia pusilla] Length = 197 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K + Y L+ K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +V+I SY CK D+I +K + K + + + ++ +P +++ + +I Sbjct: 117 INVDIPSYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQIID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|118626119|emb|CAL39359.1| small ribosomal protein 4 [Odontoschisma denudatum] Length = 202 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSYSD---RSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD V+R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N ++I SY K GD+I +K K K + + + L ++ +P +++ + + + Sbjct: 117 ISINNDIIDIPSYDRKPGDIITIKDKQKSRSIITKNVNLFQKFKIPSHLTFDLTQLQGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 177 NQIVNR---EWVNLKINELLVVEYYSR 200 >gi|67035797|gb|AAY62829.1| small ribosomal protein subunit 4 [Orthostichopsis tetragona] Length = 199 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NHCIVDIPSYRCKPHDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67036082|gb|AAY62967.1| small ribosomal protein subunit 4 [Rigodium toxarion] Length = 199 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|146261561|gb|ABQ15090.1| ribosomal protein S4 [Exbucklandia populnea] Length = 195 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I + + K A + + ++P++++++ +I S Sbjct: 116 IVDIPSYRCKPRDIITARDEQKSRALIQNYIDSSPHEELPKHLTLHPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLKINELLVVEYYSR 193 >gi|116010499|emb|CAL37356.1| ribosomal protein S4 [Buddleja davidii] Length = 194 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + +VP +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRTLIQNSLNSSPHEEVPNHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|328541140|gb|AEB21794.1| ribosomal protein S4 [Telaranea palmata] Length = 200 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G K +Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGAPPGLTSKILKPKANY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+L+ Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GDVI +K K + + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCESGDVITIKDKQRSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|322719533|gb|ADX07703.1| small ribosomal protein subunit 4 [Grimmia pilifera] gi|322719535|gb|ADX07704.1| small ribosomal protein subunit 4 [Grimmia pilifera] gi|322719537|gb|ADX07705.1| small ribosomal protein subunit 4 [Grimmia pilifera] gi|322719539|gb|ADX07706.1| small ribosomal protein subunit 4 [Grimmia pilifera] gi|322719541|gb|ADX07707.1| small ribosomal protein subunit 4 [Grimmia pilifera] Length = 198 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|46811000|gb|AAT01818.1| small ribosomal protein 4 [Diplophyllum obtusifolium] Length = 197 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI R+G K+ + SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIYVRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHISVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +V+I SY C+ GD+I V K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 ATVDIPSYNCEPGDIITVVSKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSVNQMVN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWVNLKINELLVVEYYSR 195 >gi|167748456|ref|ZP_02420583.1| hypothetical protein ANACAC_03200 [Anaerostipes caccae DSM 14662] gi|317472011|ref|ZP_07931343.1| ribosomal protein S4 [Anaerostipes sp. 3_2_56FAA] gi|167652448|gb|EDR96577.1| hypothetical protein ANACAC_03200 [Anaerostipes caccae DSM 14662] gi|316900415|gb|EFV22397.1| ribosomal protein S4 [Anaerostipes sp. 3_2_56FAA] Length = 197 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + ++ +S G R+KS+ +GLQLR KQK K Sbjct: 1 MAIDRTPVLKRCRSLGLDPVFLG---IDKKSNRTSTRGNRKKSE---YGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A++ +G T NL++ LE RLD +++R F T RQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKAEKMKGQTGVNLMTLLELRLDNVLFRLGFGRTRKECRQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG++VNI SYR GDVIE+K+ K E + R VP ++ N + + T Sbjct: 114 VLVNGKTVNIPSYRVSVGDVIEIKENHKTSPRYKEILEVTGGRMVPSWLEANQEALSGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KELPAREE---IDVPVNETLIVELYSK 197 >gi|157689510|gb|ABV65311.1| ribosomal protein S4 [Leea guineensis] Length = 193 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G KSP G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKSP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLNYVRIAGKAKGATGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I + + K A + + ++P++++++ +I S Sbjct: 116 DIPSYRCKPRDIITARDEQKSRALIQNFLDSSSHEELPKHLTLHPFQFKGVVNQIIDSN- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVGLKINELLVVEYYSR 191 >gi|46811026|gb|AAT01831.1| small ribosomal protein 4 [Lepicolea attenuata] Length = 197 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKLIRRLXAXPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 DIVDIPSYNCEPGDIITIRNKEKSQSIITKNINLFQNLKIPSHLTFDSTKLRGSITQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWITLKINELLVVEYYSR 195 >gi|297562093|ref|YP_003681067.1| ribosomal protein S4 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846541|gb|ADH68561.1| ribosomal protein S4 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 203 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + K ++ RR G L + S R Y PG HG+R + S + ++ KQK++ YY Sbjct: 2 RYTGPKVRLSRRAGTPLTRKAVSYFEKRPYPPGEHGRRVRRNSSDYAVRQAEKQKVRWYY 61 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 ++EK+ +++ A + G T +++ LE RL T+V RA +I+AARQFVNH H+ Sbjct: 62 D-LTEKQMLRVYESAKKRTGRTGEEMLAELELRLATVVLRAGLAASIYAARQFVNHGHIT 120 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFV 180 V+G+ V+I SY+ K G +I V++KS+ + +EA++ A+ + +++V+H ++ V Sbjct: 121 VDGKKVDIPSYQVKPGQIISVREKSRNMVPFVEAAEGVHADDKIAGFLAVSHKDLR---V 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + K PV LVVEFY+R Sbjct: 178 AVVDRPKREQIPVPFDEQLVVEFYAR 203 >gi|77862549|gb|ABB04547.1| small ribosomal protein 4 [Plagiochasma rupestre] Length = 201 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLSMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N ++I SY CK D I +K + K + + + ++ +P +++ + + Sbjct: 117 LINNNPIDIPSYNCKPKDTITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199 >gi|237688697|ref|YP_002905313.1| ribosomal protein S4 [Pinus krempfii] gi|226951154|gb|ACO94217.1| ribosomal protein S4 [Pinus krempfii] Length = 203 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 7/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSM--SMNRSSSRKISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + + R++G TS L+ LE RL+ I++R PTI ARQ VNH H Sbjct: 59 HYG-LTERQLLKYVRVSRRAKGSTSQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201 >gi|257457760|ref|ZP_05622921.1| ribosomal protein S4 [Treponema vincentii ATCC 35580] gi|257444810|gb|EEV19892.1| ribosomal protein S4 [Treponema vincentii ATCC 35580] Length = 204 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQK 57 M+ K K+ RR G N++G PK ++ + PG G +++ K S +G QL+ KQK Sbjct: 1 MAT-RQPKGKLVRRFGSNIFGNPKYSKLLDRKPNAPGKERGAKQRGKLSVYGEQLKEKQK 59 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + YG +SE++F ++F++A + G T N++S +E RLD +YR F + ARQ V+ Sbjct: 60 FRFAYG-MSERQFSNLFQKALKMSGVTGDNMLSLMEQRLDNTIYRMGFAVSRAQARQMVS 118 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H + L+NG+ NI S R K GDVI K K + + ++SVN +N+ A Sbjct: 119 HAYFLLNGKPANIPSMRVKVGDVITTKDKKGFQNLIRHNLSTVQGGKGSWLSVNDENLSA 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P+ P VVEFYSR Sbjct: 179 TVTTLPTPADIQPVG---NIQYVVEFYSR 204 >gi|124302908|ref|YP_001023703.1| ribosomal protein S4 [Angiopteris evecta] gi|152060544|sp|A2T335|RR4_ANGEV RecName: Full=30S ribosomal protein S4, chloroplastic gi|110628306|gb|ABG79602.1| ribosomal protein S4 [Angiopteris evecta] Length = 206 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 10/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+ + K+ + ++ Q K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +G ++E++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH Sbjct: 59 NHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMV 176 +LVN R V+I SYRCK D+I V+ ++ V + + +D +PE+++ + + Sbjct: 118 ILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQ 177 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + + LVVE+YSR Sbjct: 178 GFVNRIVTRD---SIGLDINELLVVEYYSR 204 >gi|222103500|gb|ACM44279.1| small ribosomal protein subunit 4 [Anomodon minor] Length = 204 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 6 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 62 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 63 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 121 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 122 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 181 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 182 ---LDRESIGLKINELLVVEYYSR 202 >gi|322719491|gb|ADX07682.1| small ribosomal protein subunit 4 [Niphotrichum japonicum] gi|322719493|gb|ADX07683.1| small ribosomal protein subunit 4 [Niphotrichum japonicum] gi|322719495|gb|ADX07684.1| small ribosomal protein subunit 4 [Niphotrichum japonicum] gi|322719497|gb|ADX07685.1| small ribosomal protein subunit 4 [Niphotrichum japonicum] gi|322719499|gb|ADX07686.1| small ribosomal protein subunit 4 [Niphotrichum japonicum] gi|322719501|gb|ADX07687.1| small ribosomal protein subunit 4 [Niphotrichum japonicum] gi|322719529|gb|ADX07701.1| small ribosomal protein subunit 4 [Racomitrium lanuginosum] gi|322719531|gb|ADX07702.1| small ribosomal protein subunit 4 [Racomitrium lanuginosum] Length = 198 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|3098180|gb|AAC15538.1| small ribosomal protein 4 [Mielichhoferia elongata] Length = 199 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQSLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|270300681|gb|ACZ69419.1| ribosomal protein S4 [Radula complanata] gi|270300683|gb|ACZ69420.1| ribosomal protein S4 [Radula complanata] gi|270300685|gb|ACZ69421.1| ribosomal protein S4 [Radula complanata] Length = 202 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A +G T LI LE RLD I++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 ++N +VNI SY C+ GD+I V+ + K + + + L ++ ++P +++ + + + Sbjct: 117 FVINNFTVNIPSYNCELGDIITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDYNSINFKINELLVVEYYSR 200 >gi|63191691|gb|AAY34807.1| small ribosomal protein subunit 4 [Pterogonium gracile] Length = 199 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|14276326|gb|AAK58201.1| small ribosomal protein 4 [Bartramia halleriana] Length = 199 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63191859|gb|AAY34889.1| small ribosomal protein subunit 4 [Pseudosymblepharis guatemalensis] Length = 199 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKTPHLKSNST---NQSNSTKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQELIGLKINELLVVEYYSR 197 >gi|255327167|ref|ZP_05368242.1| ribosomal protein S4 [Rothia mucilaginosa ATCC 25296] gi|255295785|gb|EET75127.1| ribosomal protein S4 [Rothia mucilaginosa ATCC 25296] Length = 210 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 10/212 (4%) Query: 1 MSK--RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K R + R +G L + + + R YGPG HG+ RK S + QL+ KQ++ Sbjct: 1 MAKHNRTRRTVRQSRALGIALTPKAEKYLERRPYGPGQHGRARKKADSNYATQLKEKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y +I E + R + EA R+ G T N++ LE+RLD +V RA F TI ARQ V H Sbjct: 61 RAQY-NIREAQMRRAYLEAKRTEGQTGKNMVELLETRLDALVLRAGFARTIAQARQMVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYISVNHDN 174 RH++V+G V+ S+ K G +I V K+++ A+ + +VP Y++V + Sbjct: 120 RHIMVDGVRVDRPSFHVKPGQLIHVHPKAEKTTPFQAAAAGENQAVLPEVPAYLNVEIEK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A R P + PVI LVVE+YSR Sbjct: 180 LHAKLERKPKREE---IPVICDEQLVVEYYSR 208 >gi|322719509|gb|ADX07691.1| small ribosomal protein subunit 4 [Codriophorus fascicularis] Length = 198 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNISFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|322719503|gb|ADX07688.1| small ribosomal protein subunit 4 [Niphotrichum canescens] Length = 198 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + + LVVE+YSR Sbjct: 176 --LDNESIGLKINELLVVEYYSR 196 >gi|322719505|gb|ADX07689.1| small ribosomal protein subunit 4 [Niphotrichum elongatum] Length = 198 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGVLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|116010507|emb|CAL37360.1| ribosomal protein S4 [Fraxinus excelsior] Length = 194 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + L+ ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDLSPHEELPNHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|46811020|gb|AAT01828.1| small ribosomal protein 4 [Isotachis multiceps] Length = 197 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD I V+ + K + + + L +P +++ + + + + Sbjct: 117 DIVDIPSYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFVNQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---ELINLKINELLVVEYYSR 195 >gi|269839290|ref|YP_003323982.1| ribosomal protein S4 [Thermobaculum terrenum ATCC BAA-798] gi|269791020|gb|ACZ43160.1| ribosomal protein S4 [Thermobaculum terrenum ATCC BAA-798] Length = 201 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTR-SYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M K+ +HK+ RR G +++G + R PG R+ + S +G+QL KQK K Sbjct: 1 MVKKREPRHKVSRRFGVDIYGTGGDSLQRRLHIPPGGFKGGRRRRLSEYGMQLFEKQKAK 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG + E++F+ +++A+R G+T HNL+ +E RLD +VYR F T ARQ V H Sbjct: 61 AYYG-VHERQFQRYYQQAERMPGNTGHNLLQLIERRLDNVVYRLGFARTRPMARQLVVHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV VNG+ V+ SY+ K G+VI + +K+ Q+ V+E + + R VP ++ + V Sbjct: 120 HVRVNGQKVDRPSYQVKPGEVITLTEKALQIPVVIEEME-SHRIVPAWLQ--REGPVGRV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P + P + +L++ FYSR Sbjct: 177 VRLPERDE---IPEPINEDLIIAFYSR 200 >gi|226228207|ref|YP_002762313.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27] gi|226091398|dbj|BAH39843.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27] Length = 205 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQKM 58 MS+ + KI RR+G L G R Y PG HGQ R+ K S + L+L AKQ + Sbjct: 1 MSR-VGPRLKIIRRLGIQLPGLTAKDAERRPYPPGQHGQSTARRRKVSLYRLRLEAKQAL 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YYG ISE + R + A G T +++ LE+RLD +V+R F TI AARQ V H Sbjct: 60 RFYYG-ISENQLRRTYAMAKTRPGRTGDVMLAMLEARLDNVVFRLGFARTIPAARQLVVH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISV-NHDNMV 176 HV VNG V+ YR + G++I++ + + V E Q + +P +++ + + Sbjct: 119 GHVYVNGSRVDRPGYRLRTGEMIKLDPRMAENPHVQEQLQRGPQVKLPGWLAKTDDAPLE 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ P +VE+Y+R Sbjct: 179 GRMIAPPTR---ESVPFACNDAAIVEYYAR 205 >gi|328541166|gb|AEB21807.1| ribosomal protein S4 [Telaranea tetradactyla] Length = 197 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ SY K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSASNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNVKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|239917776|ref|YP_002957334.1| SSU ribosomal protein S4P [Micrococcus luteus NCTC 2665] gi|281413731|ref|ZP_06245473.1| 30S ribosomal protein S4 [Micrococcus luteus NCTC 2665] gi|259495286|sp|C5CCG8|RS4_MICLC RecName: Full=30S ribosomal protein S4 gi|239838983|gb|ACS30780.1| SSU ribosomal protein S4P [Micrococcus luteus NCTC 2665] Length = 208 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 121/209 (57%), Gaps = 11/209 (5%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++R + R +G L + + + R YGPG HG+ R+ + S + ++L+ KQ+++ Sbjct: 7 TRRT---VRHSRALGIALTPKAEKYMERRPYGPGQHGRARRKQDSDYAVRLKEKQRLRAQ 63 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 Y +I E + R F+EA R+ G T NL+ LE RLD +V RA F TI ARQ V HRH+ Sbjct: 64 Y-NIREAQMRRYFEEAKRTAGLTGENLVELLEQRLDALVLRAGFARTIQQARQLVVHRHI 122 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVA 177 +V+G+ V++ S+R KEG +I V ++S+++ A+ A + V P Y++V + + A Sbjct: 123 MVDGKRVDVPSFRVKEGQMIHVHERSEKMVPFQLAAAGAHQQVLPATPGYLTVEIEKLRA 182 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T R P + PV + LVVE+Y+R Sbjct: 183 TLTRRPKRSE---VPVTCEEQLVVEYYAR 208 >gi|67035970|gb|AAY62911.1| small ribosomal protein subunit 4 [Porotrichopsis flacca] Length = 199 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|222103514|gb|ACM44286.1| small ribosomal protein subunit 4 [Iwatsukiella leucotricha] Length = 203 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|270300675|gb|ACZ69416.1| ribosomal protein S4 [Radula aquilegia] Length = 202 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRAMSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A +G T LI LE RLD I++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 ++N +VNI SY C+ GD+I ++ + K + + L ++ ++P +++ + + + Sbjct: 117 FVINNFTVNIPSYNCELGDIITIRNRQKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200 >gi|67035974|gb|AAY62913.1| small ribosomal protein subunit 4 [Porothamnium arbusculans] Length = 199 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035608|gb|AAY62735.1| small ribosomal protein subunit 4 [Cladophascum gymnomitrioides] Length = 199 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + +++ VP +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|67035666|gb|AAY62764.1| small ribosomal protein subunit 4 [Atractylocarpus longisetus] Length = 198 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ + + K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + K + + + +++ VP +++ N +I Sbjct: 117 NYIVNIPSYRCKPQDFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLKKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LNHESIGLNINELLVVEYYSR 196 >gi|67035927|gb|AAY62890.1| small ribosomal protein subunit 4 [Sanionia orthothecioides] Length = 199 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|322719573|gb|ADX07723.1| small ribosomal protein subunit 4 [Grimmia ovalis] gi|322719575|gb|ADX07724.1| small ribosomal protein subunit 4 [Grimmia ovalis] gi|322719577|gb|ADX07725.1| small ribosomal protein subunit 4 [Grimmia ovalis] gi|322719579|gb|ADX07726.1| small ribosomal protein subunit 4 [Grimmia ovalis] Length = 198 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NHIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMNFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|270300673|gb|ACZ69415.1| ribosomal protein S4 [Radula aquilegia] Length = 202 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRAMSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A +G T LI LE RLD I++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 ++N +VNI SY C+ GD+I ++ + K + + L ++ ++P +++ + + + Sbjct: 117 FVINNFTVNIPSYNCELGDIITIRNRPKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200 >gi|67035682|gb|AAY62772.1| small ribosomal protein subunit 4 [Leucobryum crispum] Length = 197 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + + K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 VNI SYRCK D I +K + K + V + + +++ VP +++ + +I Sbjct: 117 YIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFDSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + + LVVE+YSR Sbjct: 175 -LNNESIGLKINELLVVEYYSR 195 >gi|59803297|gb|AAX07757.1| Rps4 [Greeneothallus gemmiparus] Length = 199 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G L G + +RS +K S + ++L KQK++ +YG Sbjct: 1 YRGPRAKIIRRLGA-LPGLSYEMIGSRSGYTNQLATNKK--ISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH++V Sbjct: 58 -LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182 N +VNI SY CK DVI +K + + + + + L ER +P +++ + + +I Sbjct: 117 NDNAVNIPSYNCKPQDVITIKDRRESQSVITKNINLFRERKIPNHLTFDSTRFCGSVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 IDR---EWISLKINELLVVEYYSR 197 >gi|67035813|gb|AAY62837.1| small ribosomal protein subunit 4 [Catagoniopsis berteroana] Length = 199 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|116010497|emb|CAL37355.1| ribosomal protein S4 [Scrophularia vernalis] Length = 194 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + +VP +++++ +I S Sbjct: 116 VDIPSYRCKPRDIIMAKDEQKSRTLIQNSLNSSPHEEVPNHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|221195455|ref|ZP_03568510.1| ribosomal protein S4 [Atopobium rimae ATCC 49626] gi|221184642|gb|EEE17034.1| ribosomal protein S4 [Atopobium rimae ATCC 49626] Length = 197 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 15/209 (7%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ + K R++G + G K +RR+ + S +G+QLR KQK Sbjct: 1 MAIDRTPVLKRCRQLGIDPIVMGINKESHREP--------RRRRRQESEYGMQLREKQKA 52 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + E +F ++ A ++ G T NL+S LE+RLD +V+R F T ARQ V H Sbjct: 53 KFIYGVL-ENQFHGYYELAKKNPGITGDNLMSILETRLDNVVFRLGFARTRKEARQTVRH 111 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVA 177 H+ VNG+ V+I SYR K+GDVI V K+K L + E+ +E VP +I ++ D + Sbjct: 112 GHITVNGQRVDIPSYRIKKGDVIAVSSKAKDLLPIKESLIASEHTAVPAWIELDLDKLQG 171 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T + +P+ + + + L+VE YS+ Sbjct: 172 TVLELPNRDQ---IDLDIDAQLIVELYSK 197 >gi|67035592|gb|AAY62727.1| small ribosomal protein subunit 4 [Rhamphidium dicranoides] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + + A +L+ +++ +P +++ N +I Sbjct: 117 NDHIVNIPSYRCKPQDFITIKDRQESQAMILKNIDFSQKSKIPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|203284516|ref|YP_002222256.1| 30S ribosomal protein S4 [Borrelia duttonii Ly] gi|226697808|sp|B5RMG4|RS4_BORDL RecName: Full=30S ribosomal protein S4 gi|201083959|gb|ACH93550.1| 30S ribosomal protein S4 [Borrelia duttonii Ly] Length = 208 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+++ +K K+ RR G N++ +PK + + PG+HG+ R++K + +G QL KQK+ Sbjct: 1 MNRKSIAKGKLVRRFGVNIFEQPKYDKLLKKKPNPPGMHGRSRRTKVTEYGKQLIEKQKV 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ ++FKEA R G T NL++ LE R+D IVYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNVFKEARRQHGVTGDNLLALLERRIDNIVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176 +++NGR V I S + D+I+VK+K V + R +P++I VN D + Sbjct: 120 GIIILNGRRVTIPSITLRANDIIQVKEKDSLKKLVRSNIEKTSTLRKLPDWIEVNADALN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R PS + P + ++VE+YS+ Sbjct: 180 VKIIRTPSRDE---IPTLANEQMIVEYYSK 206 >gi|28194737|gb|AAO33630.1|AF480985_1 ribosomal protein S4 [Oreoweisia erosa] Length = 196 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|328949100|ref|YP_004366437.1| ribosomal protein S4 [Treponema succinifaciens DSM 2489] gi|328449424|gb|AEB15140.1| ribosomal protein S4 [Treponema succinifaciens DSM 2489] Length = 197 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R + + K RR+G N+ G PK+ R+ P ++ K S +G QL KQK+K Sbjct: 1 MATRRNPRFKECRRLGVNVCGHPKAM--NRANDPAF---KKSKKTSEYGKQLCEKQKVKA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG I E++ R + A R G T NLI LE+RLD +VYR F +I ARQ V+H H Sbjct: 56 YYG-ILERQLRRYYDIASRKEGKTGENLIVGLETRLDNLVYRIGFANSIRMARQVVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V V+G+ ++I S++ K G V+ + +K+++ + R YI V+ + + Sbjct: 115 VRVDGKKISIPSFQVKPGQVVALCEKAQKNEQFKTSFLNGNRRPLAYIEVSEEAFSGKLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + PV + LVVEFYS+ Sbjct: 175 MMPKREE---IPVEINEQLVVEFYSK 197 >gi|222103534|gb|ACM44296.1| small ribosomal protein subunit 4 [Leucodon pendulus] Length = 203 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + ++ RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRVIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|328541046|gb|AEB21747.1| ribosomal protein S4 [Hygrolembidium rigidum] gi|328541048|gb|AEB21748.1| ribosomal protein S4 [Hygrolembidium rigidum] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE R D ++R TI ARQ VNHRH+ + Sbjct: 58 -LTERQSLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I +++K K + + + L + +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSIDQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---ESINLKINELLVVEYYSR 197 >gi|12642230|gb|AAK00197.1| rps4 [Physcomitrium pyriforme] Length = 191 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S Q K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V+I Sbjct: 56 LNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I VK + K A + + +++ VP +++ + +I L Sbjct: 116 PSYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRE 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 SIGLKINELLVVEYYSR 189 >gi|67035634|gb|AAY62748.1| small ribosomal protein subunit 4 [Leucoloma sprengelianum] Length = 198 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K +++ + +++ VP +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|270300671|gb|ACZ69414.1| ribosomal protein S4 [Radula jonesii] Length = 202 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A +G T LI LE RLD I++ P+I ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPSIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 ++N +VNI SY C+ GD+I ++ + K + + L ++ ++P +++ + + + Sbjct: 117 FVINNFTVNIPSYNCELGDIITIRNRQKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200 >gi|159106799|ref|YP_001531219.1| ribosomal protein S4 [Cuscuta obtusiflora] gi|172048141|sp|A8W3I9|RR4_CUSOB RecName: Full=Plastid 30S ribosomal protein S4 gi|158142523|gb|ABW20564.1| ribosomal protein S4 [Cuscuta obtusiflora] Length = 197 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 13/207 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KSP R R S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKSPRAIRDL--------RNQSRSEYRIRLEEKQKLRF 52 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 53 HYG-LTEKQLINYVQIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 111 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNGR V+ SYRCK D+I K +K V + +L +++ ++++ Sbjct: 112 VLVNGRLVDRPSYRCKPRDIIMPKNTTKSGVLVQNSLELFTGKELANHLNLFSTPYKGLV 171 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195 >gi|116010501|emb|CAL37357.1| ribosomal protein S4 [Abeliophyllum distichum] gi|116010503|emb|CAL37358.1| ribosomal protein S4 [Forsythia x intermedia] Length = 194 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIIMAKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|116010491|emb|CAL37352.1| ribosomal protein S4 [Vincetoxicum nigrum] Length = 194 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RLKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI AARQFVNHRH+LVNG Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQFVNHRHILVNGHI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK GD+I VK + K A + ++ + +++P ++ + +I S Sbjct: 116 VDIPSYRCKPGDIITVKDEQKSKALIQKSLDSSSHQELPSHLILQSFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|12642222|gb|AAK00193.1| rps4 [Funaria apophysata] Length = 191 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S Q K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGVLPGLTNKTPQLKSSSA----NQSAAKKISQYRIRLEEKQKLRFHYG-ITERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V+I Sbjct: 56 LNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I VK + K A + + +++ VP +++ + +I L Sbjct: 116 PSYRCKPDDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRE 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 SIGLKINELLVVEYYSR 189 >gi|67035610|gb|AAY62736.1| small ribosomal protein subunit 4 [Eccremidium floridanum] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K + + +++ VP +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNLDFSQKYKVPNHLTFNFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|116010509|emb|CAL37361.1| ribosomal protein S4 [Chionanthus virginicus] gi|116010511|emb|CAL37362.1| ribosomal protein S4 [Forestiera neomexicana] gi|116010513|emb|CAL37363.1| ribosomal protein S4 [Olea europaea] gi|116010515|emb|CAL37364.1| ribosomal protein S4 [Osmanthus heterophyllus] gi|116010517|emb|CAL37365.1| ribosomal protein S4 [Phillyrea angustifolia] Length = 194 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|93213406|gb|ABF01129.1| ribosomal protein subunit 4 [Catagonium brevicaudatum] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|307683687|dbj|BAJ19822.1| ribosomal protein S4 [Picea morrisonicola] Length = 201 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++ KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE R D I+++ PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNILFQLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|116010505|emb|CAL37359.1| ribosomal protein S4 [Fontanesia phillyreoides subsp. fortunei] Length = 194 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + ++P +++++ + +I S Sbjct: 116 VDIPSYRCKPRDIIMAKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGSVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|63191673|gb|AAY34798.1| small ribosomal protein subunit 4 [Levierella fabroniacea] gi|67036090|gb|AAY62971.1| small ribosomal protein subunit 4 [Actinothuidium hookeri] gi|67036096|gb|AAY62974.1| small ribosomal protein subunit 4 [Boulaya mitteni] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63101105|gb|AAY33177.1| small ribosomal protein 4 [Hygrohypnum smithii] Length = 201 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P ++ K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+L Sbjct: 59 G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 118 VNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 178 I---LDRESIGLKINELLVVEYYSR 199 >gi|222103498|gb|ACM44278.1| small ribosomal protein subunit 4 [Hylocomium splendens] Length = 203 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P ++ K S + ++L KQK++ +Y Sbjct: 4 RYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHY 60 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 61 G-ITERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 120 VNDYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQ 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 180 I---LDRESIGLKINELLVVEYYSR 201 >gi|37992657|gb|AAR06507.1| small ribosomal protein 4 [Pilotrichella pandurifolia] Length = 200 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 2 YRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 59 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 NG V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 118 NGCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198 >gi|317134112|ref|YP_004123445.1| ribosomal protein S4 [Rhizanthella gardneri] gi|255985043|gb|ACU46590.1| ribosomal protein S4 [Rhizanthella gardneri] Length = 202 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 10/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G K P + L Q R K S + L+L KQK + Sbjct: 1 MSRYLGPCFKKIRRLGALPGLTNKIPRSR----SDLQIQLRSIKKSQYRLRLEEKQKFRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGKTKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA--SQLAERDVPEYISVNHDNMVAT 178 +LVNG V+I +YRCK D+I K K + A +++ + ++P +++++ Sbjct: 116 ILVNGDIVDIPNYRCKPLDIIAAKDKERSKAMIIKNYLISSSHGELPNHLTMDSLQHKGF 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 VNQIIDSK---CSGLKINELLVVEYYSR 200 >gi|67035837|gb|AAY62845.1| small ribosomal protein subunit 4 [Clastobryophilum bogoricum] Length = 202 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+P S ++ K S + ++L KQK++ YY Sbjct: 3 RYRGPRVKIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLDMAPTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K A + + + E+ +P +++ N + Sbjct: 119 VNDCMVDIPSYRCKPQDFITIKNQRKSKAIISKNIEFYEKYKIPNHLTYNSLEKKGLINQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200 >gi|67035779|gb|AAY62820.1| small ribosomal protein subunit 4 [Calliergonella cuspidata] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSKTIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035570|gb|AAY62716.1| small ribosomal protein subunit 4 [Cynodontium strumiferum] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKQGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQELIGLKINELLVVEYYSR 197 >gi|67035793|gb|AAY62827.1| small ribosomal protein subunit 4 [Leptopterigynandrum austro-alpinum] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQXLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|3098158|gb|AAC15527.1| small ribosomal protein 4 [Wardia hygrometrica] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTSTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R +NI SYRCK D I +K + K +++ +++ VP +++ N +I Sbjct: 117 NNRIINIPSYRCKPRDFITIKDRQKSQVMIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|328541110|gb|AEB21779.1| ribosomal protein S4 [Bazzania trilobata] Length = 196 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K+ RR+G K+ S+ K S + ++L KQK++ +YG ++ Sbjct: 1 PRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N Sbjct: 57 ERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNN 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 IVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR 176 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---EWINLKINELLVVEYYSR 194 >gi|17025864|gb|AAL32097.1| ribosomal protein 4 [Mitthyridium sp. Wall 2620] Length = 201 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P + ++ K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 59 G-LTERQLLNYVRIARKVKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SY+CK D I +K + K +++ ++ + + P +++ N + Sbjct: 118 VNNSIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199 >gi|46486556|gb|AAS98714.1| ribosomal protein subunit 4 [Hypnodendron vitiense] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K +SK A + + ++ +P +++ + +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRSKSQAIISKNIDFYQKYKIPNHLTYSSLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|260780677|ref|YP_003227080.1| 30S ribosomal protein S4 [Bryopsis hypnoides] gi|260176755|gb|ACX33764.1| 30S ribosomal protein S4 [Bryopsis hypnoides] Length = 198 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K KI RR+G K ++ + PG HG R+ +KPS + ++L KQK++ Sbjct: 1 MSRYRGPKLKIIRRLGVLPGLTSK--ISNKKNPPGQHG-RQNTKPSQYAIRLLEKQKLRY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ S K+A ++ T+ L+ LE RLD I+YR F TI + RQ + H+H Sbjct: 58 NYG-VSEKQLFSYLKKARKNSRSTAQVLLELLEMRLDNILYRLGFAKTIHSGRQLITHQH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VN + V I SY+CK D+IE SK L L++ +P ++S+ + A Sbjct: 117 IRVNQKKVTIPSYQCKINDIIEFAPNSKIDKKNLMNLDLSK--IPSFLSIEMNKTSAQIK 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + + + LV+E+YS+ Sbjct: 175 NIIPRSEVL---MDLNELLVIEYYSK 197 >gi|67036108|gb|AAY62980.1| small ribosomal protein subunit 4 [Dolichomitra cymbifolia] Length = 199 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCVVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|270300647|gb|ACZ69402.1| ribosomal protein S4 [Radula episcia] Length = 202 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTI---KPKSSFIDRSMSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A ++G T LI LE RLD ++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNTKGSTGQVLIQLLEMRLDNTIFCLGLAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +++N +VNI SY C+ GD+I ++ + K + ++ ++P +++ + + + Sbjct: 117 IVINNNTVNIPSYNCEFGDIITIRNQQKSRLIITRNINSFQKLEIPNHLNFDLTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDYNSISFKINELLVVEYYSR 200 >gi|270300655|gb|ACZ69406.1| ribosomal protein S4 [Radula wichurae] gi|270300657|gb|ACZ69407.1| ribosomal protein S4 [Radula wichurae] gi|270300659|gb|ACZ69408.1| ribosomal protein S4 [Radula wichurae] gi|270300661|gb|ACZ69409.1| ribosomal protein S4 [Radula wichurae] gi|270300663|gb|ACZ69410.1| ribosomal protein S4 [Radula carringtonii] gi|270300665|gb|ACZ69411.1| ribosomal protein S4 [Radula carringtonii] gi|270300667|gb|ACZ69412.1| ribosomal protein S4 [Radula carringtonii] gi|270300669|gb|ACZ69413.1| ribosomal protein S4 [Radula carringtonii] Length = 202 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G L G + +S+ +K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGY-LPGLSNKTLKPKSFSIDRSISNKK--ISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A +G T LI LE RLD I++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 ++N +VNI SY C+ GD+I V+ + K + + L ++ ++P +++ + + + Sbjct: 117 FVINNFTVNIPSYNCELGDIITVRNRQKSKSIITRNMNLFQKLEIPSHLTFDSTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200 >gi|46486554|gb|AAS98713.1| ribosomal protein subunit 4 [Sciadocladus kerrii] Length = 199 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + + +++G T L+ LE RLD +++R PTI ARQ +NHRH+LV Sbjct: 58 -ITERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQTIISKNIHFSQKYKIPNHLTYNSLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|322719521|gb|ADX07697.1| small ribosomal protein subunit 4 [Racomitrium subsecundum] gi|322719523|gb|ADX07698.1| small ribosomal protein subunit 4 [Racomitrium subsecundum] gi|322719525|gb|ADX07699.1| small ribosomal protein subunit 4 [Racomitrium subsecundum] Length = 198 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NHIVNIPSYRCKPQDFITIKDRQKSQAMIMKNIDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LNRESIGLKINELLVVEYYSR 196 >gi|3098242|gb|AAC15569.1| small ribosomal protein 4 [Goniobryum subbasilare] Length = 200 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K + K + + ++ +P +++ N + Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDQQKYQTIISKNIYFYQKYKIPNHLTYNSLEKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|67035799|gb|AAY62830.1| small ribosomal protein subunit 4 [Phyllogonium fulgens] Length = 199 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|49182817|gb|AAT57870.1| small ribosomal protein [Tritomaria quinquedentata] Length = 195 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN + Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSVNQTVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|63100989|gb|AAY33119.1| small ribosomal protein 4 [Dendropogonella rufescens] Length = 199 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NNGIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|294337120|emb|CAQ52710.1| ribosomal protein S4 [Glossadelphus baldwinii] Length = 202 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 NEI---LDRESIGLKINELLVVEYYSR 200 >gi|67035907|gb|AAY62880.1| small ribosomal protein subunit 4 [Palustriella falcata] Length = 199 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E+RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPETRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKSQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|322719469|gb|ADX07671.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides] gi|322719471|gb|ADX07672.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides] gi|322719473|gb|ADX07673.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides] gi|322719475|gb|ADX07674.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides] gi|322719477|gb|ADX07675.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides] gi|322719479|gb|ADX07676.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides] Length = 198 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKAPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NLIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|121761861|gb|ABM65016.1| ribosomal protein S4 [Plagiomnium cf. tezukae Wyatt 1799] Length = 198 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE+RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLETRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 DRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPDHLTYNSLNKKGLVNQIL 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 DRD---SIDLKINELLVVEYYSR 196 >gi|224534184|ref|ZP_03674763.1| ribosomal protein S4 [Borrelia spielmanii A14S] gi|224514545|gb|EEF84860.1| ribosomal protein S4 [Borrelia spielmanii A14S] Length = 208 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D +VYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 +++NGR V I S + D I++K+K + + + R++P +I VN DN+ Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADNLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|11121337|emb|CAC14830.1| ribosomal protein subunit 4 [Plagiothecium undulatum] Length = 199 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|309322363|ref|YP_003934443.1| ribosomal protein S4 [Cathaya argyrophylla] gi|307683289|dbj|BAJ19596.1| ribosomal protein S4 [Cathaya argyrophylla] Length = 203 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P + + K S + ++ KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPQKRKDS----MNRSSSRKISQYRIRSEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I+++ PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFQLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDNMVA 177 + VN V+I SY CK DVI ++ + + A + + L +R+ +P +++ + Sbjct: 116 IQVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRNRDKLPNHLTFHSLQCKG 175 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 FINQIIDSK---WISLKINELLVVEYYSR 201 >gi|67035572|gb|AAY62717.1| small ribosomal protein subunit 4 [Hymenolomopsis tolucensis] Length = 196 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|121761857|gb|ABM65014.1| ribosomal protein S4 [Plagiomnium cf. cuspidatum Wyatt 1774] gi|121761865|gb|ABM65018.1| ribosomal protein S4 [Plagiomnium cf. cuspidatum Wyatt 1832] Length = 199 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D+I +K + K + + ++ +P +++ N N +I Sbjct: 117 NDRLVNIPSYRCKPQDLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 LDRD---FIDLKINELLVVEYYSR 197 >gi|158518576|sp|Q49CB8|RR4_CUSSA RecName: Full=Plastid 30S ribosomal protein S4 Length = 197 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 13/207 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KSP R R + S + ++L KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTNKSPRAIRDL--------RNNSRSEYRIRLEEKQKLRF 52 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 53 HYG-LTEKQLINYVQIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTIXAARQLVNHRH 111 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNGR VN SYRCK D+I K +K V + +L +++ ++++ Sbjct: 112 VLVNGRLVNRPSYRCKPHDIIMPKNTTKSGVLVQNSLELFTGKELANHLNLFSTPYKGLV 171 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195 >gi|187776652|ref|ZP_02993125.1| hypothetical protein CLOSPO_00167 [Clostridium sporogenes ATCC 15579] gi|187775311|gb|EDU39113.1| hypothetical protein CLOSPO_00167 [Clostridium sporogenes ATCC 15579] Length = 197 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 107/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD IVYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG VNI SY K GDVI +++K ++ + ++ YI ++D + Sbjct: 115 ILVNGSKVNIPSYGVKTGDVITLREKYRKNDEFADNFLALKKFTLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197 >gi|63100987|gb|AAY33118.1| small ribosomal protein 4 [Callicladium haldanianum] gi|67035819|gb|AAY62840.1| small ribosomal protein subunit 4 [Eurohypnum leptothallum] gi|222103512|gb|ACM44285.1| small ribosomal protein subunit 4 [Iwatsukiella leucotricha] Length = 199 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|26399118|sp|P59149|RR4_NECCR RecName: Full=30S ribosomal protein S4, chloroplastic gi|23504375|emb|CAC80632.1| small ribosomal protein 4 [Neckera crispa] Length = 202 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+ S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSISNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + +L ++ +P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETMISKNIELYQKSKIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|222103558|gb|ACM44308.1| small ribosomal protein subunit 4 [Oxystegus tenuirostris] Length = 203 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S K S + ++L KQK++ +Y Sbjct: 4 RYRGPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHY 60 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 61 G-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K + + +++ +P +++ N + Sbjct: 120 VNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQ 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 180 I---LDQELIGLKINELLVVEYYSR 201 >gi|17025839|gb|AAL32085.1| ribosomal protein 4 [Mitthyridium sp. Streimann 40876] Length = 201 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P + ++ K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 59 G-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SY+CK D I +K + K +++ ++ + + P +++ N + Sbjct: 118 VNNNMVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199 >gi|63101011|gb|AAY33130.1| small ribosomal protein 4 [Climacium americanum] Length = 200 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 117 VNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|270300677|gb|ACZ69417.1| ribosomal protein S4 [Radula lindenbergiana] gi|270300679|gb|ACZ69418.1| ribosomal protein S4 [Radula lindenbergiana] Length = 202 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A +G T LI LE RLD I++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 ++N +VNI SY C+ GD+I V+ + K + + L ++ ++P +++ + + + Sbjct: 117 FVINNFTVNIPSYNCELGDIITVRNRHKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDYNSINFKINELLVVEYYSR 200 >gi|67036012|gb|AAY62932.1| small ribosomal protein subunit 4 [Palamocladium leskeoides] Length = 199 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|220912772|ref|YP_002488081.1| 30S ribosomal protein S4 [Arthrobacter chlorophenolicus A6] gi|254764565|sp|B8H9C3|RS4_ARTCA RecName: Full=30S ribosomal protein S4 gi|219859650|gb|ACL39992.1| RNA-binding S4 domain protein [Arthrobacter chlorophenolicus A6] Length = 208 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ ++ ++ R +G L + + R YGPG HG+ RK + S + ++LR KQ++ Sbjct: 1 MANNTRARRQARLSRSLGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG I E + F+EA R++G T NLI LE RLD +V RA F TI ARQ V H Sbjct: 61 RAQYG-IREAQMTRAFEEARRTKGLTGENLIELLEMRLDALVLRAGFARTIAQARQLVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174 RH+LV+G V+ S+R EG ++ V +S+ + + A+ A RD VP Y+ V + Sbjct: 120 RHILVDGIRVDRPSFRVGEGQLVHVHSRSETMVPLQVAAAGAHRDVLPAVPAYLDVKLEA 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A VR P + PV + LVVEFY+R Sbjct: 180 LQARLVRRPKRSE---IPVTCEEQLVVEFYAR 208 >gi|80974144|gb|ABB53765.1| small ribosomal subunit protein 4 [Euptychium setigerum] Length = 202 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITEQQLLNYVRIARKTKGSTGEVLLQLPEMRSDNILFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN VN YRCK D I VK + + + ++ +P +++ Sbjct: 117 ILVNDCIVNKPRYRCKPQDFIIVKNEKNSEGIINKDGDFHQKSKIPNHLTYIFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NKI---LDRESIGLKINELLVVEYYSR 200 >gi|24473818|gb|AAL82752.1| small ribosomal subunit protein 4 [Brachymenium systylium] Length = 199 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNINLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63191675|gb|AAY34799.1| small ribosomal protein subunit 4 [Orthostichella pentasticha] Length = 199 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 NG V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NGCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|323404246|gb|ADX62377.1| small ribosomal protein subunit 4 [Schistidium liliputanum] Length = 198 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|3098200|gb|AAC15548.1| small ribosomal protein 4 [Meesia uliginosa] Length = 199 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLEFYQKYKIPNHLTYNSLKKQGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|78369619|gb|ABB43039.1| ribosomal protein 4 [Exostratum blumii] Length = 201 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K + ++ K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVKIVRRLGVLPGLTNKVLQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 59 G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I VK + K + + + ++ +P +++ N + Sbjct: 118 VNNFIVDIPSYRCKPQDFITVKNQQKSEVIINKNIEFYQKFKIPNHLTYNSLEKKGLVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 178 I---LDSESIGLKINELLVVEYYSR 199 >gi|119960630|ref|YP_948024.1| 30S ribosomal protein S4 [Arthrobacter aurescens TC1] gi|152060931|sp|A1R712|RS4_ARTAT RecName: Full=30S ribosomal protein S4 gi|119947489|gb|ABM06400.1| ribosomal protein S4 [Arthrobacter aurescens TC1] Length = 206 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 8/210 (3%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ ++ ++ R +G L + + R YGPG HG+ RK + S + ++LR KQ++ Sbjct: 1 MANNTRARRTARLSRALGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG I E + F+EA R++G T NL+ LE RLD +V RA F TI ARQ V H Sbjct: 61 RAQYG-IREAQMTRAFEEARRTKGLTGENLVELLEMRLDALVLRAGFARTIAQARQLVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176 RH++V+G V+ S+R EG +I V +S+ + A+ A +VP Y+ V D + Sbjct: 120 RHIMVDGIRVDRPSFRVGEGQLIHVHSRSEVMPPFQVAAAGAHVLNNVPAYLDVKIDALQ 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A VR P + PVI + LVVEFY+R Sbjct: 180 ARLVRRPKRSE---VPVICEEQLVVEFYAR 206 >gi|222103428|gb|ACM44243.1| small ribosomal protein subunit 4 [Ceratodon purpureus] Length = 199 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 2 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 57 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 58 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 117 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + K +++ + +++ VP +++ N +I Sbjct: 118 DNIVNIPSYRCKPQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI- 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 --LDQESVGLKINELLVVEYYSR 197 >gi|67035777|gb|AAY62819.1| small ribosomal protein subunit 4 [Macrothamnium macrocarpum] gi|67036068|gb|AAY62960.1| small ribosomal protein subunit 4 [Gollania cylindricarpa] Length = 199 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|49182813|gb|AAT57868.1| small ribosomal protein [Triandrophyllum subtrifidum] Length = 195 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGVLPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-VTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHIAINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGSINQAINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|49182720|gb|AAT57822.1| small ribosomal protein [Herbertus sakurai] gi|49182722|gb|AAT57823.1| small ribosomal protein [Herbertus subdentatus] Length = 195 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCQLGDIITIKNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|328541160|gb|AEB21804.1| ribosomal protein S4 [Lepidozia sp. 1 von Konrat 6/20-4] Length = 198 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ SY K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSTKLRGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---ELINLKINELLVVEYYSR 195 >gi|322719559|gb|ADX07716.1| small ribosomal protein subunit 4 [Schistidium strictum] gi|322719561|gb|ADX07717.1| small ribosomal protein subunit 4 [Schistidium strictum] gi|322719563|gb|ADX07718.1| small ribosomal protein subunit 4 [Schistidium strictum] gi|322719565|gb|ADX07719.1| small ribosomal protein subunit 4 [Schistidium strictum] gi|322719569|gb|ADX07721.1| small ribosomal protein subunit 4 [Schistidium apocarpum] gi|323404242|gb|ADX62375.1| small ribosomal protein subunit 4 [Schistidium trichodon] gi|323404244|gb|ADX62376.1| small ribosomal protein subunit 4 [Schistidium trichodon] gi|323404248|gb|ADX62378.1| small ribosomal protein subunit 4 [Schistidium trichodon var. nutans] Length = 198 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|63191879|gb|AAY34899.1| small ribosomal protein subunit 4 [Gymnostomiella vernicosa] Length = 198 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S+ + K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R +NI SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NRIINIPSYRCKPQDFITIKDRQKSQVLITKNIGFFQKSKIPNHLTFNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|63101041|gb|AAY33145.1| small ribosomal protein 4 [Cyptodontopsis obtusifolia] Length = 199 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|215400724|ref|YP_002327485.1| ribosomal protein S4 [Vaucheria litorea] gi|194441174|gb|ACF70902.1| ribosomal protein S4 [Vaucheria litorea] Length = 204 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 6/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + KI RR G NL G + + G Q++ K S + ++L KQK++ Sbjct: 1 MARYLGPRLKIIRRFG-NLPGLTSKIITKKPSGQQASNQKKLQKSSDYKIRLFEKQKLRY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ R EA R +G T+ L+ LE RLDTI++R PTI AARQFVNH H Sbjct: 60 NYG-LTERQLRKYVSEARRKKGSTAFYLMQLLEMRLDTIIFRLGLAPTIPAARQFVNHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +L+N + +NI S++C D+I +K K V ++ +P ++++N + A Sbjct: 119 ILINKKKINIPSFQCHPTDIITIKNKKGTKQLVEKSLANPRFSTLPNHLTLNTKLLQAEV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + L+VE+Y+R Sbjct: 179 KDIVIRKD---LSFEVNDLLIVEYYAR 202 >gi|17025837|gb|AAL32084.1| ribosomal protein 4 [Mitthyridium sp. Mishler 7/23/98] Length = 201 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P + ++ K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVKIIRRLGILSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 59 G-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVR 181 VN VNI SY+CK D I +K + K +++ ++ ++ P +++ N + Sbjct: 118 VNNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFFSKHKTPNHLTFNSVEKKGLVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199 >gi|222103482|gb|ACM44270.1| small ribosomal protein subunit 4 [Drepanocladus aduncus] Length = 202 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKSQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|222103504|gb|ACM44281.1| small ribosomal protein subunit 4 [Amblystegium serpens] Length = 203 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|67035771|gb|AAY62816.1| small ribosomal protein subunit 4 [Andoa berthelotiana] Length = 199 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63100973|gb|AAY33111.1| small ribosomal protein 4 [Homomallium adnatum] Length = 199 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A + +G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|294786846|ref|ZP_06752100.1| ribosomal protein S4 [Parascardovia denticolens F0305] gi|315226482|ref|ZP_07868270.1| 30S ribosomal protein S4 [Parascardovia denticolens DSM 10105] gi|294485679|gb|EFG33313.1| ribosomal protein S4 [Parascardovia denticolens F0305] gi|315120614|gb|EFT83746.1| 30S ribosomal protein S4 [Parascardovia denticolens DSM 10105] Length = 208 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K + ++ ++ R +G L + +S R YGPG HG+ R+ S + ++LR KQ++ Sbjct: 1 MTKVQRARRQVRLSRALGIALTPKAQSLFEKRPYGPGEHGRDRRRAESDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SEK+ RS+++ A R+ G T ++ LE+RLD +V R+ F T ARQFV H Sbjct: 61 RAQYG-VSEKQLRSVYERATRASGQTGTSMQVQLETRLDALVLRSGFARTTAQARQFVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174 RH+LV+G V+ SYR K G I+VK KS+ + A++ RD VP Y+ VN + Sbjct: 120 RHILVDGNIVDRPSYRVKPGQTIQVKPKSQTMEPFQAAAEGVHRDVLPAVPGYLDVNLPS 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + AT R+P + PV + VVE+Y+R Sbjct: 180 LKATLTRLPEVEE---IPVQVNIQYVVEYYAR 208 >gi|222103502|gb|ACM44280.1| small ribosomal protein subunit 4 [Thuidium tamariscinum] Length = 203 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K ++ K S + ++L KQK++ +Y Sbjct: 4 RYRGPRVRIIRRLGTLPGLTNKISQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHY 60 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 61 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 120 VNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 180 I---LDRESIGLKINELLVVEYYSR 201 >gi|47606926|gb|AAT36383.1| ribosomal protein subunit 4 [Pyrrhobryum dozyanum] Length = 199 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ YYG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITEQQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|222103460|gb|ACM44259.1| small ribosomal protein subunit 4 [Ceratodon purpureus] Length = 198 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + K +++ + +++ VP +++ N +I Sbjct: 117 DNIVNIPSYRCKPQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESVGLKINELLVVEYYSR 196 >gi|49182665|gb|AAT57795.1| small ribosomal protein [Adelanthus lindenbergianus] Length = 195 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ G++I +K K K + + + L + +P +++ + + + + Sbjct: 117 VDIPSYNCEPGNIITIKNKQKSQSIITKNINLFQNLKIPSHLTFDSIQLRGFVNQTVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|67035955|gb|AAY62904.1| small ribosomal protein subunit 4 [Handeliobryum sikkimense] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDCITIKDQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|24473806|gb|AAL82746.1| small ribosomal subunit protein 4 [Acidodontium megalocarpum] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDFITIKDQQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035757|gb|AAY62809.1| small ribosomal protein subunit 4 [Orthomitrium tuberculatum] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H++V Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NHRIVDIPSYRCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 LDRK---LIGLKINELLVVEYYSR 197 >gi|24473848|gb|AAL82768.1| small ribosomal subunit protein 4 [Imbribryum muehlenbeckii] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ V+HRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ +P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKIPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|3098146|gb|AAC15521.1| small ribosomal protein 4 [Funaria hygrometrica] Length = 190 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 9/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S Q K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGVLPGLTNKTPQLKSSSP----NQSAAKKISQYRIRLEEKQKLRFHYG-ITERQLL 55 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V+I Sbjct: 56 NYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIP 115 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I VK + K A + + +++ VP +++ + +I L Sbjct: 116 SYRCKPEDSITVKNRQKSQAIITKNIDFSQKAKVPNHLTFDSTQKKGLVNQI---LDRES 172 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 IGLKINELLVVEYYSR 188 >gi|116010523|emb|CAL37368.1| ribosomal protein S4 [Jasminum arborescens] Length = 196 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G KSP G L Q R K S + ++L KQK+ +YG + E Sbjct: 1 RFKKIRRLGALPGLTNKSP----KAGSDLRKQSRSRKKSQYRIRLEEKQKLCFHYG-LRE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + A +++G T L+ LE RLD I++R TI AARQ V HRH+LVNGR Sbjct: 56 YQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVTHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186 V+ SYRCK D+I K K + + + +++P ++++N +I S Sbjct: 116 VDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLNPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|203288050|ref|YP_002223065.1| 30S ribosomal protein S4 [Borrelia recurrentis A1] gi|226697811|sp|B5RPW0|RS4_BORRA RecName: Full=30S ribosomal protein S4 gi|201085270|gb|ACH94844.1| 30S ribosomal protein S4 [Borrelia recurrentis A1] Length = 208 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 123/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+++ +K K+ RR G N++ +PK + ++ PG+HG+ R++K + +G QL KQK+ Sbjct: 1 MNRKSIAKGKLVRRFGVNIFEQPKYDKLLKKKTNPPGMHGRSRRTKVTEYGKQLIEKQKV 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ ++FKEA R G T NL++ LE R+D IVYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNVFKEARRQHGVTGDNLLALLERRIDNIVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176 +++NGR V I S + D+I+VK+K V + R +P++I VN D + Sbjct: 120 GIIILNGRRVTIPSITLRANDIIQVKEKDSFKKLVRSNIEKTSTLRKLPDWIEVNADALN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R PS + P + ++VE+YS+ Sbjct: 180 VKIIRTPSRDE---IPTLANEQMIVEYYSK 206 >gi|89147826|gb|ABD62761.1| ribosomal protein 4 [Gyrothyra underwoodiana] Length = 197 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K + SY + K S + ++L KQK++ +YG ++E+ Sbjct: 4 VKIIRRLGALPGLTSKILKSKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTER 59 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V Sbjct: 60 QLLKYVYIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNNIV 119 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY C+ GD+I VK K K + + + L ++ +P +++ + + + ++ + Sbjct: 120 DIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDPVELQGSVNQMINR-- 177 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 -EWVNLKINELLVVEYYSR 195 >gi|224532017|ref|ZP_03672649.1| ribosomal protein S4 [Borrelia valaisiana VS116] gi|224511482|gb|EEF81888.1| ribosomal protein S4 [Borrelia valaisiana VS116] Length = 208 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D IVYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSLLERRIDNIVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 V++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 120 GIVILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|63191689|gb|AAY34806.1| small ribosomal protein subunit 4 [Loeskypnum badium] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S L+ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|3098254|gb|AAC15575.1| small ribosomal protein 4 [Bryolawtonia vancouveriensis] gi|67036078|gb|AAY62965.1| small ribosomal protein subunit 4 [Dolichomitriopsis diversiformis] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|226321184|ref|ZP_03796723.1| ribosomal protein S4 [Borrelia burgdorferi 29805] gi|226233417|gb|EEH32159.1| ribosomal protein S4 [Borrelia burgdorferi 29805] Length = 208 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D +VYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAVSRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 +++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|48527383|gb|AAT45824.1| small ribosomal protein 4 [Plagiochila integerrima] Length = 195 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 8/202 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLGALAGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD + R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + +R +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKKKSQSIVTKNINSFQRLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVV 201 ++ + + + LVV Sbjct: 177 NQMINR---EWINLKINELLVV 195 >gi|63191659|gb|AAY34791.1| small ribosomal protein subunit 4 [Ctenidium molluscum] gi|63191661|gb|AAY34792.1| small ribosomal protein subunit 4 [Hyocomium armoricum] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|328541034|gb|AEB21741.1| ribosomal protein S4 [Kurzia sp. Brown 03/140a] Length = 203 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS KI RR+G + + K S + ++L KQK++ Sbjct: 1 MSXYRGPXVKIIRRLGALPGLTSRXL---KPKSGXNDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T + LE RLD + R TI ARQ VNHRH Sbjct: 58 HYG-LTERQSLKYVRIARRAKGSTGQVSLQLLEMRLDNTILRLGMASTIPEARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +K+K K + + + L + ++P +++ + + + Sbjct: 117 ISINKNIVDIPSYNCEPGDIITIKKKQKSQSVITKNVNLFQNLEIPSHLTFDLIKLCGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + + LVVE+YSR Sbjct: 177 NRTINR---ESIDLKINELLVVEYYSR 200 >gi|67035901|gb|AAY62877.1| small ribosomal protein subunit 4 [Vittia pachyloma] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + + +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQQSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|47606910|gb|AAT36375.1| ribosomal protein subunit 4 [Leucodon julaceus] Length = 199 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|157689528|gb|ABV65320.1| ribosomal protein S4 [Nitraria retusa] Length = 193 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I + K A + + ++P++++++ +I S Sbjct: 116 DIPSYRCKPQDIITARDDHKSRALIQTYLDSSHHEELPKHLTLHVSQYKGLVNQIIDSK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVGLKINELLVVEYYSR 191 >gi|157689504|gb|ABV65308.1| ribosomal protein S4 [Ixonanthes icosandra x Ixonanthes cuneata] Length = 195 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S F ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQFRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 ERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K + K A + + ++++P+++++ +I S Sbjct: 116 IVDIPSYRCKPRDIITAKDEQKSRAMIQNSLDSFPQKELPKHLTLRPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 176 K---WTGLKINELLIVEYYSR 193 >gi|63191849|gb|AAY34884.1| small ribosomal protein subunit 4 [Reimersia inconspicua] Length = 199 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 NNCIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKYKIPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|222103540|gb|ACM44299.1| small ribosomal protein subunit 4 [Climacium japonicum] Length = 204 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 6 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 62 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 63 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 121 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + +++ +P +++ + +I Sbjct: 122 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFSQKSKIPNHLTYSSLEKKGLVNQI 181 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 182 ---LDRESIGLKINELLVVEYYSR 202 >gi|219684339|ref|ZP_03539283.1| ribosomal protein S4 [Borrelia garinii PBr] gi|219672328|gb|EED29381.1| ribosomal protein S4 [Borrelia garinii PBr] Length = 208 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKKIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D IVYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNIVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 +++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|195941435|ref|ZP_03086817.1| 30S ribosomal protein S4 [Borrelia burgdorferi 80a] gi|216264611|ref|ZP_03436603.1| ribosomal protein S4 [Borrelia burgdorferi 156a] gi|218249862|ref|YP_002375120.1| ribosomal protein S4 [Borrelia burgdorferi ZS7] gi|221218143|ref|ZP_03589609.1| ribosomal protein S4 [Borrelia burgdorferi 72a] gi|223889058|ref|ZP_03623648.1| ribosomal protein S4 [Borrelia burgdorferi 64b] gi|224532426|ref|ZP_03673053.1| ribosomal protein S4 [Borrelia burgdorferi WI91-23] gi|225548830|ref|ZP_03769807.1| ribosomal protein S4 [Borrelia burgdorferi 94a] gi|226697807|sp|B7J2H5|RS4_BORBZ RecName: Full=30S ribosomal protein S4 gi|215981084|gb|EEC21891.1| ribosomal protein S4 [Borrelia burgdorferi 156a] gi|218165050|gb|ACK75111.1| ribosomal protein S4 [Borrelia burgdorferi ZS7] gi|221192091|gb|EEE18312.1| ribosomal protein S4 [Borrelia burgdorferi 72a] gi|223885484|gb|EEF56584.1| ribosomal protein S4 [Borrelia burgdorferi 64b] gi|224512636|gb|EEF83010.1| ribosomal protein S4 [Borrelia burgdorferi WI91-23] gi|225370433|gb|EEG99869.1| ribosomal protein S4 [Borrelia burgdorferi 94a] gi|312148256|gb|ADQ30915.1| ribosomal protein S4 [Borrelia burgdorferi JD1] gi|312149661|gb|ADQ29732.1| ribosomal protein S4 [Borrelia burgdorferi N40] Length = 208 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D +VYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 +++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|3098194|gb|AAC15545.1| small ribosomal protein 4 [Orthodontium lineare] Length = 197 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN Sbjct: 57 TERQLLNYVRVARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 RIVDIPSYRCKPQDFITIKDQQKSQAIIDKNLDFYQKSKIPNHLTYNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|67035674|gb|AAY62768.1| small ribosomal protein subunit 4 [Dicranodontium meridionale] Length = 199 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ + + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K V + + +++ VP +++ N +I Sbjct: 117 NNYIVNIPSYRCKPQDFITIKNRQKSQFIVTKNIEFSQKYKVPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LNKESIGLKINELLVVEYYSR 197 >gi|320537621|ref|ZP_08037557.1| ribosomal protein S4 [Treponema phagedenis F0421] gi|320145539|gb|EFW37219.1| ribosomal protein S4 [Treponema phagedenis F0421] Length = 210 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 11/211 (5%) Query: 3 KRE----SSKHKIDRRIGENLWGRPK--SPVNTRSYGPGL-HGQRRKSKPSYFGLQLRAK 55 + K KI RR+G N++G PK ++ + GPG G + + K S +G QL+ K Sbjct: 4 RYTMAVKQPKGKIVRRLGVNIFGNPKYSKLLDKKPNGPGKVRGAKSRGKMSVYGEQLKEK 63 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK + YG +SE++FR++F +A + +G T N++S +E RLD +YR F + ARQ Sbjct: 64 QKFRFAYG-MSERQFRNLFAKAQQMKGVTGDNMLSLMEQRLDNTIYRMGFAISRAQARQM 122 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM 175 V+H + L+NG+ NI S R K DVI K K + L+ +++V+ +N+ Sbjct: 123 VSHAYFLINGKPANIPSMRIKANDVITSKDKKGIQNLIRHNLSLSHGSRGSWLAVDEENL 182 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT +PS+ P VVE+YSR Sbjct: 183 SATVSILPSATDIQPVG---NIQYVVEYYSR 210 >gi|325963404|ref|YP_004241310.1| 30S ribosomal protein S4P [Arthrobacter phenanthrenivorans Sphe3] gi|323469491|gb|ADX73176.1| SSU ribosomal protein S4P [Arthrobacter phenanthrenivorans Sphe3] Length = 208 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ ++ ++ R +G L + + R YGPG HG+ RK + S + ++LR KQ++ Sbjct: 1 MANNTRARRQARLSRSLGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG I E + F+EA R++G T NLI LE RLD +V RA F TI ARQ V H Sbjct: 61 RAQYG-IREAQMTRAFEEARRTKGLTGENLIELLEMRLDALVLRAGFARTIAQARQLVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174 RH++V+G V+ S+R EG +I V +S+ + + A+ A RD VP Y+ V + Sbjct: 120 RHIMVDGVRVDRPSFRVGEGQLIHVHSRSETMVPLQVAAAGAHRDVLPAVPGYLDVKLEA 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A VR P + PV + LVVEFY+R Sbjct: 180 LQARLVRRPKRSE---VPVTCEEQLVVEFYAR 208 >gi|297179941|gb|ADI23950.1| small ribosomal protein 4 [Leucobryum sp. Vanderpoorten s.n.] Length = 197 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + + K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 VNI SYRCK D I +K + K + V + + +++ VP +++ N +I Sbjct: 117 YIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LNHESIGLKINELLVVEYYSR 195 >gi|63100995|gb|AAY33122.1| small ribosomal protein 4 [Pireella angustifolia] Length = 198 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITEQQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 HCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|67035895|gb|AAY62874.1| small ribosomal protein subunit 4 [Amblystegium serpens] Length = 199 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|157689544|gb|ABV65328.1| ribosomal protein S4 [Qualea parviflora] Length = 194 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + K A V + +VP++++++ +I S Sbjct: 116 VDIPSYRCKPRDIITARDDQKSRAMVQNYLDSSPHEEVPKHLTIHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|63078617|gb|AAY29395.1| ribosomal protein S4 [Tortella flavovirens] gi|63078619|gb|AAY29396.1| ribosomal protein S4 [Tortella flavovirens] gi|63078621|gb|AAY29397.1| ribosomal protein S4 [Tortella flavovirens var. glareicola] Length = 197 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S L+ ++ S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSSINQLNSNKK---ISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|51598868|ref|YP_073056.1| 30S ribosomal protein S4 [Borrelia garinii PBi] gi|61215482|sp|Q660Q7|RS4_BORGA RecName: Full=30S ribosomal protein S4 gi|51573439|gb|AAU07464.1| ribosomal protein S4 [Borrelia garinii PBi] Length = 208 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D IVYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNIVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 +++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|26399170|sp|Q9FSD9|RR4_PELNE RecName: Full=30S ribosomal protein S4, chloroplastic gi|10933881|emb|CAC14050.1| small ribosomal protein 4 [Pellia neesiana] Length = 200 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K + S G +K S + ++L KQK++ Sbjct: 1 MSRYRGPRTKIIRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGQILSQTLEMRLDNIIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L+N +V+I SY C+ DVI V + K+ + + VP +++ + + Sbjct: 117 ILINDNTVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVN 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 176 QTIDR---ECIDLKINELLVVEYYSR 198 >gi|222103480|gb|ACM44269.1| small ribosomal protein subunit 4 [Codriophorus fascicularis] Length = 202 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 5 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 60 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 61 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 120 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 121 NRIVNIPSYRCKPQDFITIKDRQKSQAMIMKNIYFSQKYKIPNHLTFNSLENKGLINQI- 179 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 --LDHESIGLKINELLVVEYYSR 200 >gi|46486570|gb|AAS98721.1| ribosomal protein subunit 4 [Racopilum spectabile] Length = 200 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I +K + K A + ++ +P +++ + + Sbjct: 117 VNDRIVNIPSYRCKPQDFITIKDRQKSQAITSKDIDFYQKSKIPNHLTYSSLEKKGFVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198 >gi|63101039|gb|AAY33144.1| small ribosomal protein 4 [Dendrocryphaea cuspidata] Length = 199 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCVVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|47606884|gb|AAT36362.1| ribosomal protein subunit 4 [Bryobrothera crenulata] Length = 200 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P +++ + + Sbjct: 117 VNNFIVDIPSYRCKPQDFITIKNQKKSEVIINKNMEFYQKSKIPNHLTYSSLEKKGLVKQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|15594960|ref|NP_212749.1| 30S ribosomal protein S4 [Borrelia burgdorferi B31] gi|3914903|sp|O51560|RS4_BORBU RecName: Full=30S ribosomal protein S4 gi|2688529|gb|AAC66961.1| ribosomal protein S4 (rpsD) [Borrelia burgdorferi B31] Length = 209 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 2 MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 61 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D +VYRA F + ARQ V+H Sbjct: 62 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSH 120 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 +++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 121 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 180 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 181 IKVKHAPSRDE---IPTLANEQMVVEYYSK 207 >gi|323148832|ref|YP_004221925.1| ribosomal protein S4 [Erodium carvifolium] gi|316926296|gb|ADU58149.1| ribosomal protein S4 [Erodium carvifolium] Length = 201 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 17/211 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K R+G K P P R K S + +L KQK++ Sbjct: 1 MSRYRGPRFKKICRLGALPGLTSKEP--RDPTPP------RFKKKSQYHTRLEEKQKLRF 52 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 53 HYG-LTERQLLKYVRIAGKAKGPTGEVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 111 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-----LAERDVPEYISVNHDNM 175 +LVNGR V+I SYRCK D+I ++K K + Q R + +++ Sbjct: 112 ILVNGRIVDIPSYRCKPRDIITAREKEKSRTLIQNYLQNSLNSSPRRKLANHLTTQPLQY 171 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 172 KGLVNQIIDSK---WVGLKINELLVVEYYSR 199 >gi|322719481|gb|ADX07677.1| small ribosomal protein subunit 4 [Racomitrium barbuloides] gi|322719483|gb|ADX07678.1| small ribosomal protein subunit 4 [Racomitrium barbuloides] gi|322719485|gb|ADX07679.1| small ribosomal protein subunit 4 [Niphotrichum ericoides] gi|322719487|gb|ADX07680.1| small ribosomal protein subunit 4 [Niphotrichum ericoides] gi|322719489|gb|ADX07681.1| small ribosomal protein subunit 4 [Niphotrichum ericoides] Length = 198 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|212716064|ref|ZP_03324192.1| hypothetical protein BIFCAT_00977 [Bifidobacterium catenulatum DSM 16992] gi|212661431|gb|EEB22006.1| hypothetical protein BIFCAT_00977 [Bifidobacterium catenulatum DSM 16992] Length = 208 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T + +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNVV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQAAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + PV + VVEFY+R Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208 >gi|63100981|gb|AAY33115.1| small ribosomal protein 4 [Ectropothecium leptochaeton] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I YRCK D+I +K + K + + + +R +P +++ + +I Sbjct: 117 NDCIVDISGYRCKPQDLITIKNQQKSETIINKNIEFYQRSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|17025808|gb|AAL32071.1| ribosomal protein 4 [Syrrhopodon mahensis] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNH+H+LV Sbjct: 58 -LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ + + + P +++ N +I Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKTPNHLTFNSIEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|270300645|gb|ACZ69401.1| ribosomal protein S4 [Radula antilleana] gi|270300649|gb|ACZ69403.1| ribosomal protein S4 [Radula nudicaulis] gi|270300651|gb|ACZ69404.1| ribosomal protein S4 [Radula nudicaulis] Length = 202 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGYLPGLSNKTI---KPKSSFIDRSMSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + A ++G T LI LE RLD ++ PTI ARQ VNH+H Sbjct: 58 HYG-LTEKQLLKYVRIARNTKGSTGQVLIQLLEMRLDNTIFCLGLAPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +++N +VNI SY C+ GD+I ++ + K + ++ ++P +++ + + + Sbjct: 117 IVINNNTVNIPSYNCEFGDIITIRNRHKSRLIITRNINSFQKLEIPNHLNFDLTQLRGSI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NQ---RIDYNSISFKINELLVVEYYSR 200 >gi|62288929|sp|P69635|RR4_BRAPI RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288930|sp|P69636|RR4_BRASY RecName: Full=30S ribosomal protein S4, chloroplastic gi|439924|emb|CAA82429.1| ribosomal protein S4 [Brachypodium pinnatum] gi|439926|emb|CAA82430.1| ribosomal protein S4 [Brachypodium sylvaticum] Length = 196 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSQSLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|67036110|gb|AAY62981.1| small ribosomal protein subunit 4 [Chrysohypnum diminutivum] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQATSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|183601528|ref|ZP_02962898.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis HN019] gi|219683934|ref|YP_002470317.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis AD011] gi|241190973|ref|YP_002968367.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196379|ref|YP_002969934.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|259495270|sp|B8DUR2|RS4_BIFA0 RecName: Full=30S ribosomal protein S4 gi|183219134|gb|EDT89775.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis HN019] gi|219621584|gb|ACL29741.1| ribosomal protein S4 [Bifidobacterium animalis subsp. lactis AD011] gi|240249365|gb|ACS46305.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250933|gb|ACS47872.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793962|gb|ADG33497.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis V9] Length = 206 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS R + ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ Sbjct: 1 MSNRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRAESDYAVRLREKQRLRA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+ R+ +++ + G T + +++ LE+RLD +V RA T ARQFV HRH Sbjct: 61 QYG-ISEKQLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGIARTTAQARQFVVHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176 +LV+G V+ SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ Sbjct: 120 ILVDGNIVDRPSYRVKPGQTIQVKPKSQTMVPFQIAAEGTHRDVLPPVPGYLDVNLASLK 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT R P + PV + VVEFY+R Sbjct: 180 ATLTRKPEPEE---IPVQVNIQYVVEFYAR 206 >gi|92417443|gb|ABE76817.1| ribosomal protein subunit 4 [Notothylas orbicularis] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKTPHVKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDCITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|67035986|gb|AAY62919.1| small ribosomal protein subunit 4 [Meteoriopsis reclinata] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63191704|gb|AAY34813.1| small ribosomal protein subunit 4 [Orthomnion elimbatum] Length = 200 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K + K + + ++ +P +++ N N + Sbjct: 117 VNDRLVDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 ILDRN---SIDLKINELLVVEYYSR 198 >gi|42527448|ref|NP_972546.1| 30S ribosomal protein S4 [Treponema denticola ATCC 35405] gi|61215636|sp|Q73LC2|RS4_TREDE RecName: Full=30S ribosomal protein S4 gi|41818033|gb|AAS12457.1| ribosomal protein S4 [Treponema denticola ATCC 35405] gi|325473706|gb|EGC76895.1| 30S ribosomal protein S4 [Treponema denticola F0402] Length = 206 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 7/203 (3%) Query: 7 SKHKIDRRIGENLWGRPK--SPVNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 K K RR+G N++G PK ++ + GPG G R++ K S +G QL+ KQK + YG Sbjct: 6 PKGKTVRRLGVNIYGNPKYDKLLDRKPNGPGKERGARKRGKTSVYGEQLKEKQKFRFAYG 65 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ISE++FR+++K+A R G T N+IS +E RLD +YR F + ARQ V H + + Sbjct: 66 -ISERQFRNLYKKASRMPGVTGDNMISLMEQRLDNTIYRMGFAISRAQARQMVTHAYFFI 124 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183 NG+ VNI S DVI K K + ++ +++++ + + AT +P Sbjct: 125 NGKPVNIPSMCVSVNDVITTKNKKGIQNLIRHNMSTSQSARGSWLTIDDEKLSATVNILP 184 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + P VVE+YSR Sbjct: 185 VTTDIQPVG---NIQNVVEYYSR 204 >gi|322719567|gb|ADX07720.1| small ribosomal protein subunit 4 [Schistidium rivulare] Length = 198 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|93213404|gb|ABF01128.1| ribosomal protein subunit 4 [Hypnum cupressiforme] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L+ Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|14276324|gb|AAK58200.1| small ribosomal protein 4 [Helicophyllum torquatum] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ YYG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NNRVVDIPSYRCKPQDFITIKNRQKSQVVISKNIDFYQKFKIPNHLTYNSLENKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LNRESIGLKINELLVVEYYSR 197 >gi|67035783|gb|AAY62822.1| small ribosomal protein subunit 4 [Dendroalsia abietina] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEISLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + A + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRTSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63101035|gb|AAY33142.1| small ribosomal protein 4 [Lepyrodon tomentosus] Length = 199 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A R++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARRAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|548873|sp|P36467|RR4_PENVI RecName: Full=30S ribosomal protein S4, chloroplastic gi|439962|emb|CAA82446.1| ribosomal protein S4 [Pennisetum villosum] Length = 196 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFNSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ ++P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPANLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKVNELLVVEY 196 >gi|328541120|gb|AEB21784.1| ribosomal protein S4 [Psiloclada clandestina] Length = 198 Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K+ RR+G + + SY K S + ++L KQK++ +YG Sbjct: 1 RGPRVKVIRRLGALPGLTNRILESKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD+I +K K K + + L + +P +++ + + + + Sbjct: 117 NNIVDIPSYNCEPGDIITIKDKQKSQSVITRNINLFQNLKIPSHLTFDSIKLCGSINQTI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWINLKINELLVVEYYSR 196 >gi|323404250|gb|ADX62379.1| small ribosomal protein subunit 4 [Grimmia cribrosa] Length = 198 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K +++ +++ +P +++ N +I Sbjct: 117 NRVVNIPSYRCKSQDFITIKDRQKSQTMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|24473816|gb|AAL82751.1| small ribosomal subunit protein 4 [Bryum pungens] Length = 199 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITTKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|312897333|ref|ZP_07756759.1| ribosomal protein S4 [Megasphaera micronuciformis F0359] gi|310621551|gb|EFQ05085.1| ribosomal protein S4 [Megasphaera micronuciformis F0359] Length = 195 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R ++ K RR G N++G PK+ + +R+ K S +G QL KQK++ Sbjct: 1 MATRREARFKQCRRFGVNVYGHPKALKRVKK-------DQRQKKMSEYGTQLLEKQKLRA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY ++ E++F + +A + G T N++ LE RLD +VYR F +I ARQ VNH H Sbjct: 54 YY-NLLERQFVRYYDKAKKQEGVTGENMLKLLECRLDNLVYRIGFANSIRQARQMVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LV+G+ V+I S + K G I +K+ S+ ++ Q + YI N D T Sbjct: 113 ILVDGKRVDIPSAQVKVGSTITLKEGSRNNEMYKKSFQEVKTFDLPYIEKNFDAFEGTLT 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + L+VE YS+ Sbjct: 173 RMPERSE---LPLEINETLIVELYSK 195 >gi|253795707|ref|YP_003038803.1| 30S ribosomal subunit protein S4 [Candidatus Hodgkinia cicadicola Dsem] gi|253740015|gb|ACT34350.1| 30S ribosomal subunit protein S4 [Candidatus Hodgkinia cicadicola Dsem] Length = 207 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 124/205 (60%), Gaps = 1/205 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++R K K DRR+GE+LWG +S VN PG HG + +S S + ++L AKQK+K Sbjct: 1 MNRRLRPKFKFDRRVGESLWGVSRSSVNRVPTAPGQHGYKTRSSVSEYAIRLTAKQKLKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +++E K +K A + RGD +HNL+ LE RLD +VYRA+ + AARQ ++H H Sbjct: 61 YYSNLTESKLVKAYKTALKYRGDVAHNLVRVLERRLDVLVYRARLAASFRAARQLISHGH 120 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 VLVN V+I S+ CK GDV V A V EA ER VP +IS + ++ T V Sbjct: 121 VLVNNSKVDICSFECKPGDVFRVAPCFVNAAVVKEAVLGCERSVPNHISCDFKHLKFTLV 180 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 + P++ + +PV M P LV E+YS Sbjct: 181 KPPAACGAL-FPVAMCPELVAEYYS 204 >gi|49182752|gb|AAT57838.1| small ribosomal protein [Nardia insecta] gi|49182764|gb|AAT57844.1| small ribosomal protein [Nardia scalaris] Length = 195 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|67035787|gb|AAY62824.1| small ribosomal protein subunit 4 [Meteorium illecebrum] Length = 199 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|313887983|ref|ZP_07821661.1| ribosomal protein S4 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845938|gb|EFR33321.1| ribosomal protein S4 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 198 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 10/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K K K RR+G N+ G PK+ R K + +G QL KQ+++ Sbjct: 1 MAKMMDPKFKQSRRLGLNVCGHPKAMKRATRGT-----ARSDKKLTEYGKQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F ++FKEA R++G T NL++FLE+RLD++ YR F +I ARQ V+H H Sbjct: 56 YYGVL-EKQFVNLFKEAQRTQGQTGPNLVTFLETRLDSLCYRMGFASSIRQARQMVSHCH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SYRC+ GDVI + K +++ E YIS + D AT V Sbjct: 115 LTVNGKKVNIPSYRCQAGDVIALSAKGRKVDLFKENYNTNIVVNYPYISKDED-FKATLV 173 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ P+ ++ L+VEFYS+ Sbjct: 174 SLPNR---EDIPIEIEDQLIVEFYSK 196 >gi|67035899|gb|AAY62876.1| small ribosomal protein subunit 4 [Eriodon conostomus] gi|67035903|gb|AAY62878.1| small ribosomal protein subunit 4 [Drepanocladus aduncus] gi|67035909|gb|AAY62881.1| small ribosomal protein subunit 4 [Cratoneuropsis relaxa] gi|67035911|gb|AAY62882.1| small ribosomal protein subunit 4 [Hypnobartlettia fontana] Length = 199 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67036080|gb|AAY62966.1| small ribosomal protein subunit 4 [Camptochaete arbuscula] Length = 198 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|119025715|ref|YP_909560.1| 30S ribosomal protein S4 [Bifidobacterium adolescentis ATCC 15703] gi|154487466|ref|ZP_02028873.1| hypothetical protein BIFADO_01319 [Bifidobacterium adolescentis L2-32] gi|152060937|sp|A1A195|RS4_BIFAA RecName: Full=30S ribosomal protein S4 gi|118765299|dbj|BAF39478.1| 30S ribosomal protein S4 [Bifidobacterium adolescentis ATCC 15703] gi|154083984|gb|EDN83029.1| hypothetical protein BIFADO_01319 [Bifidobacterium adolescentis L2-32] Length = 208 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T + +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQAAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + PV + VVEFY+R Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208 >gi|222103510|gb|ACM44284.1| small ribosomal protein subunit 4 [Ptilium crista-castrensis] Length = 203 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + ++ ++P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIINRNIEFYQKSEIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|63078575|gb|AAY29374.1| ribosomal protein S4 [Hyophila involuta] Length = 197 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S+ + K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYIRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSIIPNHLTFNFLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|49182754|gb|AAT57839.1| small ribosomal protein [Marsupella aquatica] Length = 195 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIELRGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|67035988|gb|AAY62920.1| small ribosomal protein subunit 4 [Neodicladiella pendula] Length = 199 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|116010521|emb|CAL37367.1| ribosomal protein S4 [Syringa vulgaris] Length = 194 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|254431650|ref|ZP_05045353.1| ribosomal protein S4 [Cyanobium sp. PCC 7001] gi|197626103|gb|EDY38662.1| ribosomal protein S4 [Cyanobium sp. PCC 7001] Length = 188 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G+ KS RSY PG HGQ R+ + Y ++L KQK++ YG ISE++ Sbjct: 1 MGDLPGLTRKSA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRFNYG-ISERQLVRYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 K+A G + NL+ LE+RLD I +R F PT+ ARQ VNH HV VNGR V+I SY+ Sbjct: 57 KKARAQGGSSGTNLLKLLENRLDNICFRLGFGPTVPGARQLVNHGHVTVNGRVVDIASYQ 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GDV+ ++++ + + ++P ++ ++ + A + + + Sbjct: 117 CKPGDVVAIRERKQSKKLAEGNLEFPGLANIPPHLELDKAKLSAKVIS---KCEREWVAL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVEFYSR Sbjct: 174 EINELLVVEFYSR 186 >gi|3914840|sp|O19992|RR4_BOBGL RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292744|emb|CAA92565.1| ribosomal protein S4 [Bobartia gladiata] Length = 194 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQDYTASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|26399188|sp|Q9M4C0|RR4_HAPHO RecName: Full=30S ribosomal protein S4, chloroplastic gi|8017362|emb|CAB92130.1| small ribosomal protein 4 [Haplomitrium hookeri] Length = 202 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G +L G + ++ +K S + ++L KQK++ Sbjct: 1 MSRYRGPRMKIIRRLG-SLPGLTNKVLRSKPGYTDQLISNKK--VSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T + L+ LE RLD +++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRIARKAKGSTGNVLLQLLEMRLDNVIFRLGMSSTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +++N V+ Y CK D+I +K S+ + + + ++R P ++ + V Sbjct: 117 IMINDEMVDTPGYNCKPRDIITLKNISESRSGIPKGIDSSQRSRTPNHLVFDSSRGVGFV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 NQIIDR---EWISLKINELLVVEYYSR 200 >gi|548870|sp|P36464|RR4_LYGSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|439952|emb|CAA82443.1| ribosomal protein S4 [Lygeum spartum] Length = 196 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P + + H K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTPKSRSNLKKKFH----SGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVQIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|67035823|gb|AAY62842.1| small ribosomal protein subunit 4 [Wijkia extenuata] Length = 199 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|322719515|gb|ADX07694.1| small ribosomal protein subunit 4 [Racomitrium himalayanum] gi|322719517|gb|ADX07695.1| small ribosomal protein subunit 4 [Racomitrium himalayanum] gi|322719519|gb|ADX07696.1| small ribosomal protein subunit 4 [Racomitrium himalayanum] Length = 198 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NHIVNIPSYRCKPQDFITIKDRQKSQAMIMKNIYFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|46811056|gb|AAT01846.1| small ribosomal protein 4 [Symphyogyna hymenophyllum] Length = 197 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G L G + +RS +K S + ++L KQK++ +YG + Sbjct: 1 GPRAKIIRRLGA-LPGLSHEMIGSRSGYTNQLAANKK--ISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH++VN Sbjct: 57 TERQLLKYVRIARGAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184 +V+I SY CK DVI ++ + + + + + L ER +P +++ + + +I Sbjct: 117 DTVDIPSYNCKPQDVITIRDRRESQSVITKNINLFRERRIPNHLTFDSTRFCGSVNQIID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWIGLKINELLVVEYYSR 195 >gi|308235918|ref|ZP_07666655.1| 30S ribosomal protein S4 [Gardnerella vaginalis ATCC 14018] gi|311114983|ref|YP_003986204.1| 30S ribosomal protein S4 [Gardnerella vaginalis ATCC 14019] gi|310946477|gb|ADP39181.1| 30S ribosomal protein S4 [Gardnerella vaginalis ATCC 14019] Length = 208 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG +SEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-LSEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNLV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+V+ KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + VVE+Y+R Sbjct: 190 VDQ---IPVEVNIQYVVEYYAR 208 >gi|3914850|sp|O20221|RR4_GLAPA RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292884|emb|CAA92554.1| ribosomal protein S4 [Gladiolus papilio] Length = 197 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WIGLKINELLVVEYYSR 193 >gi|86438910|emb|CAJ55427.1| small ribosomal protein 4 [Plagiochila fruticella] Length = 194 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGVLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+H+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHKHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWLILKINELLVVEYYSR 193 >gi|222103532|gb|ACM44295.1| small ribosomal protein subunit 4 [Gollania varians] Length = 203 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 2 MSPVRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 59 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 118 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 178 NQI---LDRESIGLKINELLVVEYYSR 201 >gi|156618909|ref|YP_001430045.1| ribosomal protein S4 [Cuscuta gronovii] gi|171769771|sp|A7M903|RR4_CUSGR RecName: Full=Plastid 30S ribosomal protein S4 gi|156555947|emb|CAM98331.1| ribosomal protein S4 [Cuscuta gronovii] Length = 197 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 13/207 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KSP R R S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKSPRAIRDL--------RNQSRSEYRIRLEEKQKLRF 52 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + + A +++G T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 53 HYG-LTEKQLINYVRIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 111 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNGR V+ SYRCK D+I K +K V + QL +++ ++++ Sbjct: 112 VLVNGRLVDRPSYRCKPRDIIMPKNTTKSGVLVQNSLQLFTGKELATHLNLFSTPYKGLV 171 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195 >gi|300741583|ref|ZP_07071604.1| ribosomal protein S4 [Rothia dentocariosa M567] gi|311113677|ref|YP_003984899.1| 30S ribosomal protein S4 [Rothia dentocariosa ATCC 17931] gi|300380768|gb|EFJ77330.1| ribosomal protein S4 [Rothia dentocariosa M567] gi|310945171|gb|ADP41465.1| 30S ribosomal protein S4 [Rothia dentocariosa ATCC 17931] Length = 210 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 10/212 (4%) Query: 1 MSK--RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K R + R +G L + + + R YGPG HG+ RK S + QL+ KQ++ Sbjct: 1 MAKNNRTRRTVRQSRALGIALTPKAEKYLERRPYGPGQHGRARKKADSNYATQLKEKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y +I E + R + EA R G T NL+ LE+RLD +V R+ F TI ARQ V H Sbjct: 61 RAQY-NIREAQMRRAYLEAKRVEGQTGKNLVEHLETRLDALVLRSGFARTIAQARQMVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYISVNHDN 174 RH++V+G V+ S+R K G +I V KS++ A+ + +VP Y++V + Sbjct: 120 RHIMVDGVRVDRPSFRVKPGQLIHVHPKSEKTTPFQVAAAGENQAVLPEVPAYLNVEIEK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A R P + PV+ LVVE+YSR Sbjct: 180 LHAKLERAPKREE---IPVVCDEQLVVEYYSR 208 >gi|77862561|gb|ABB04553.1| small ribosomal protein 4 [Targionia hypophylla] Length = 201 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ + Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGALPGLINKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N V+I SY CK D+I +K + K + + + ++ +P ++ ++ + Sbjct: 117 LLNNNIVDIPSYNCKPKDIITIKDRQKSQSIITKNLNSFQKQKIPNHLILDLMQIKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 QTIDR---EWIYLKINELLVVEYYSR 199 >gi|328541038|gb|AEB21743.1| ribosomal protein S4 [Megalembidium insulanum] Length = 197 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K Y K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T + LE R D + R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I +++K K + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCEPGDIITIREKQKSQSVITRNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWIDLKINELLVVEYYSR 195 >gi|49182669|gb|AAT57797.1| small ribosomal protein [Anthelia julacea] Length = 195 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ E RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + L ++ +P ++ + + + + Sbjct: 117 VDIPSYNCQPGDIITVKNKQKSQLIIAKNINLFQKLKIPSHLIFDFTELRGVVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|67035972|gb|AAY62912.1| small ribosomal protein subunit 4 [Homalia trichomanoides] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035811|gb|AAY62836.1| small ribosomal protein subunit 4 [Fabronia pusilla] Length = 198 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEVIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLTINELLVVEYYSR 196 >gi|322719543|gb|ADX07708.1| small ribosomal protein subunit 4 [Grimmia unicolor] gi|322719545|gb|ADX07709.1| small ribosomal protein subunit 4 [Grimmia longirostris] gi|322719547|gb|ADX07710.1| small ribosomal protein subunit 4 [Grimmia longirostris] gi|322719549|gb|ADX07711.1| small ribosomal protein subunit 4 [Grimmia longirostris] gi|322719551|gb|ADX07712.1| small ribosomal protein subunit 4 [Grimmia longirostris] gi|322719553|gb|ADX07713.1| small ribosomal protein subunit 4 [Grimmia donniana] Length = 198 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD ++++ PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFQLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + + A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQESQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|283782865|ref|YP_003373619.1| ribosomal protein S4 [Gardnerella vaginalis 409-05] gi|297242860|ref|ZP_06926798.1| ribosomal protein S4 [Gardnerella vaginalis AMD] gi|283442009|gb|ADB14475.1| ribosomal protein S4 [Gardnerella vaginalis 409-05] gi|296889071|gb|EFH27805.1| ribosomal protein S4 [Gardnerella vaginalis AMD] Length = 208 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNLV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+V+ KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + VVE+Y+R Sbjct: 190 VDQ---IPVEVNIQYVVEYYAR 208 >gi|157689434|gb|ABV65273.1| ribosomal protein S4 [Cannabis sativa] Length = 198 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 10/204 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K RR+G K P G L Q R K S + ++L KQK++ +YG Sbjct: 1 RGPRFKKIRRLGALPGLTSKKP----RAGSDLRNQLRPGKKSQYRIRLEEKQKLRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 LTEEQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQ-KSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 R V+I SYRCK D+I V+ + K + V + R ++P+++++N + +I Sbjct: 116 NRMVDIPSYRCKPRDIITVRDEQKKSKSLVQNYLDSSIREELPKHLTLNPFQYQGSVNQI 175 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 IDSK---WVGLKINELLVVEYYSR 196 >gi|78369613|gb|ABB43036.1| ribosomal protein 4 [Syrrhopodon involutus] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ + ++ P +++ N +I Sbjct: 117 NNHMVNIPSYQCKPQDFITIKDQQKYQTMIIKNTNFFSKHKTPNHLTFNSVEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|93213408|gb|ABF01130.1| ribosomal protein subunit 4 [Stereophyllum radiculosum] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63191720|gb|AAY34820.1| small ribosomal protein subunit 4 [Mniomalia semilimbata] Length = 198 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGVLPGLTNKTPQLNSST---INTSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKDQQKFQTIISKNIDFYQKSKIPNHLTYNSLTKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196 >gi|167767777|ref|ZP_02439830.1| hypothetical protein CLOSS21_02312 [Clostridium sp. SS2/1] gi|317497068|ref|ZP_07955395.1| ribosomal protein S4 [Lachnospiraceae bacterium 5_1_63FAA] gi|167710516|gb|EDS21095.1| hypothetical protein CLOSS21_02312 [Clostridium sp. SS2/1] gi|291558882|emb|CBL37682.1| SSU ribosomal protein S4P [butyrate-producing bacterium SSC/2] gi|316895613|gb|EFV17768.1| ribosomal protein S4 [Lachnospiraceae bacterium 5_1_63FAA] Length = 197 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + + RS R K S +GLQL KQK K Sbjct: 1 MAVDRTPVLKRCRSLGLDPVFLGIDKKSNRSL------NRANRKKSEYGLQLCEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A+R +G T NL++ LE RLD +++R + T RQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKAERMKGQTGTNLMTLLELRLDNVLFRLGYGRTRKECRQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY+ K GDVIE+K+K + E ++ E R +P ++ +HDN T Sbjct: 114 VLVNGKQVNIPSYQVKAGDVIEIKEKHRTSPRYKEILEVTEGRMIPSWLEADHDNFTGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS + V + L+VE YS+ Sbjct: 174 KELPSRDE---IDVPVNETLIVELYSK 197 >gi|42556452|gb|AAS19821.1| small ribosomal protein 4 [Lophozia ventricosa] Length = 191 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNLNLFQKMKIPSHLTFDSTKLQGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|289178715|gb|ADC85961.1| SSU ribosomal protein S4P [Bifidobacterium animalis subsp. lactis BB-12] Length = 239 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS R + ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ Sbjct: 34 MSNRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRAESDYAVRLREKQRLRA 93 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+ R+ +++ + G T + +++ LE+RLD +V RA T ARQFV HRH Sbjct: 94 QYG-ISEKQLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGIARTTAQARQFVVHRH 152 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176 +LV+G V+ SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ Sbjct: 153 ILVDGNIVDRPSYRVKPGQTIQVKPKSQTMVPFQIAAEGTHRDVLPPVPGYLDVNLASLK 212 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT R P + PV + VVEFY+R Sbjct: 213 ATLTRKPEPEE---IPVQVNIQYVVEFYAR 239 >gi|67036094|gb|AAY62973.1| small ribosomal protein subunit 4 [Platylomella lescurii] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLXKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|222103434|gb|ACM44246.1| small ribosomal protein subunit 4 [Trachycystis microphylla] gi|222103454|gb|ACM44256.1| small ribosomal protein subunit 4 [Trachycystis microphylla] Length = 197 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGVLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 RLVDIPSYRCKPQDFIAIKDRQKSQTIISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIDLKINELLVVEYYSR 195 >gi|37992557|gb|AAR06457.1| small ribosomal protein 4 [Hookeria lucens] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ V Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A + + + ++ P +++ + RI Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|6002094|emb|CAA58956.1| ribosomal protein S4 [Zizania latifolia] Length = 196 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196 >gi|62288944|sp|P69650|RR4_SETVI RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288948|sp|P69654|RR4_TRIRO RecName: Full=30S ribosomal protein S4, chloroplastic gi|439968|emb|CAA82449.1| ribosomal protein S4 [Setaria viridis] gi|440142|emb|CAA82458.1| ribosomal protein S4 [Melinis repens] Length = 196 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ +P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKVNELLVVEY 196 >gi|322719507|gb|ADX07690.1| small ribosomal protein subunit 4 [Codriophorus fascicularis] gi|322719511|gb|ADX07692.1| small ribosomal protein subunit 4 [Codriophorus fascicularis] gi|322719513|gb|ADX07693.1| small ribosomal protein subunit 4 [Codriophorus fascicularis] Length = 198 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIYFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|49182750|gb|AAT57837.1| small ribosomal protein [marchantiophyte contaminant] Length = 195 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKPKSSY---IDRSISNKKVSQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINSDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K V + L ++ +P +++++ + + + Sbjct: 117 VDIPSYNCEPGDIITVKTKQKSQLIVTKNINLFQKLKIPSHLTLDSTELRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIDLKINELLVVEYYSR 193 >gi|3098164|gb|AAC15530.1| small ribosomal protein 4 [Plagiobryum donianum] gi|27227939|gb|AAN85767.1| ribosomal protein subunit 4 [Bryum preissianum] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|116010495|emb|CAL37354.1| ribosomal protein S4 [Verbena officinalis] Length = 194 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDPRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + +VP +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRTLIQNSLNSSPPEEVPNHLTLHPIQYKGLVNQIIDSQ 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|17025834|gb|AAL32083.1| ribosomal protein 4 [Mitthyridium sp. Orban 1995] Length = 200 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 2 YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 59 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ ++ + + P +++ N +I Sbjct: 118 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LDQESIGLKINELLVVEYYSR 198 >gi|12642218|gb|AAK00191.1| rps4 [Encalypta armata] Length = 195 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD IV+R TI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMASTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A +++ +++ VP ++S + +I L Sbjct: 117 VNIPSYRCKPQDFISIKDRQKSQAIIIKNIDFSQKSKVPNHLSFDSLQKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67035789|gb|AAY62825.1| small ribosomal protein subunit 4 [Pseudocryphaea domingensis] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035795|gb|AAY62828.1| small ribosomal protein subunit 4 [Regmatodon declinatus] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|310779569|ref|YP_003967902.1| SSU ribosomal protein S4P [Ilyobacter polytropus DSM 2926] gi|309748892|gb|ADO83554.1| SSU ribosomal protein S4P [Ilyobacter polytropus DSM 2926] Length = 195 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANRKPTEYAIQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y + EK+FR ++ EA+R G T NLI +LE RLD +VYR T ARQ V+H H Sbjct: 56 IYS-VMEKQFRKLYAEANRRDGVTGLNLIQYLERRLDNVVYRLGIAKTRRQARQVVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SYR K GDVI V + SK + + A + + + P ++ V+ + + Sbjct: 115 IAVNGRKVNIASYRVKVGDVISVIENSKNVEIIKSAVEAS--NAPSWLEVDKASFTGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + L+VEFYSR Sbjct: 173 QNPTKDD---LDFELNEALIVEFYSR 195 >gi|222103556|gb|ACM44307.1| small ribosomal protein subunit 4 [Brachythecium salebrosum] Length = 203 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|24473810|gb|AAL82748.1| small ribosomal subunit protein 4 [Acidodontium subrotundum] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDFITIKDQQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|49066380|gb|AAT49276.1| ribosomal protein system 4 [Orthotrichum exiguum] Length = 200 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 2 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 59 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N I Sbjct: 118 NDRIVDIPSYRCKPQDFITIKSRQKSQDIINKNIDFYQKQKIPNHLTYNSLEKKGLVNEI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LNRELIGLKINELLVVEYYSR 198 >gi|37992453|gb|AAR06405.1| small ribosomal protein 4 [Canalohypopterygium tamariscinum] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 NG V+I SYRCK D I +K + K A + + + ++ +P ++ N + +I Sbjct: 117 NGYIVDIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKYKIPNHLIYNSLDKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|157689480|gb|ABV65296.1| ribosomal protein S4 [Guaiacum officinale] Length = 195 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K RR+G K P + Q R K S + ++L KQK++ +YG + Sbjct: 1 GPRFKKIRRLGALPGLTNKRPKARTNT----RNQSRSGKKSQYRIRLEEKQKLRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ +E RLD I++R TI ARQFVNHRH+LVN Sbjct: 56 TERQLLKYVRIARKAKGSTGQVLLQLIEMRLDNILFRLGMALTIPQARQFVNHRHILVND 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 R VNI SYRCK D+I V+ K V +++ ++++++ +I S Sbjct: 116 RIVNIPSYRCKPRDIITVRDDQKSRTLVQNYLDSPSQELAKHLTLHPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLRINELLVVEYYSR 193 >gi|67035785|gb|AAY62823.1| small ribosomal protein subunit 4 [Leucodon sciuroides] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIXRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|187918474|ref|YP_001884037.1| 30S ribosomal protein S4 [Borrelia hermsii DAH] gi|226697809|sp|B2S0W1|RS4_BORHD RecName: Full=30S ribosomal protein S4 gi|119861322|gb|AAX17117.1| SSU ribosomal protein S4P [Borrelia hermsii DAH] Length = 208 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 121/210 (57%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+++ +K K+ RR G N++ +PK + + PG+HG+ R++K + +G QL KQK+ Sbjct: 1 MNRKNIAKGKLVRRFGINIFEQPKYDKLLKKKPNPPGMHGRSRRAKITEYGKQLIEKQKV 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG ISE++ +IFKEA R G T NL++ LE R+D +VYRA F + ARQ V+H Sbjct: 61 KFTYG-ISERQLTNIFKEARRQHGVTGDNLLALLERRIDNVVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176 +++NGR V I S + D+I+VK+K V + R +P +I VN D++ Sbjct: 120 GIIMLNGRRVTIPSITLRANDIIQVKEKDSLKKLVRSNIEKTSTLRKLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R PS + P + ++VE+YS+ Sbjct: 180 VKITRPPSRDE---IPTLANEQMIVEYYSK 206 >gi|83416512|gb|ABC18276.1| small ribosomal subunit protein 4 [Bryum bicolor] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|46486586|gb|AAS98729.1| ribosomal protein subunit 4 [Rutenbergia madagassa] Length = 200 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K A + + + ++ +P +++ + + Sbjct: 117 VNDYIVDIPSYRCKPQDFITIKNQRKYEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDSESIGLKINELLVVEYYSR 198 >gi|46811030|gb|AAT01833.1| small ribosomal protein 4 [Moerckia blyttii] Length = 197 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G L G + + S RK S + ++ KQK++ +YG + Sbjct: 1 GPRAKIIRRLGA-LPGLSNGMLGSGSSYTNQSTANRK--ISQYRIRSEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A R++G T L+ LE RLD IV+R PTI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVRIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILIND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPS 184 +V+I SY C+ DVI ++ + + + L++ + +P +++++ + ++ Sbjct: 117 DTVDIPSYSCEPKDVITIRDRQESRLIIARNMDLSQGQKIPNHLTLDSTQFRGSVDQVID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWIDLKINELLVVEYYSR 195 >gi|17025855|gb|AAL32093.1| ribosomal protein 4 [Mitthyridium sp. Wall 3864] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ ++ + + P +++ N +I Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|67035917|gb|AAY62885.1| small ribosomal protein subunit 4 [Campyliadelphus stellatus] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|3914847|sp|O20213|RR4_FURGI RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292864|emb|CAA92564.1| ribosomal protein S4 [Furcraea gigantea] Length = 194 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGTLPGLTSKRP----RSGSDLKNPLRSVKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 56 RQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDSFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|330837631|ref|YP_004412272.1| 30S ribosomal protein S4P [Spirochaeta coccoides DSM 17374] gi|329749534|gb|AEC02890.1| SSU ribosomal protein S4P [Spirochaeta coccoides DSM 17374] Length = 215 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 107/217 (49%), Gaps = 13/217 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP----------VNTRSYGPGLHGQRRKSKPSYFGL 50 M++ K+K R L R + R PG + R K + +G+ Sbjct: 1 MARYTGPKYKHVRADKARLVARGEKTDTHPAARRPGQKHRDSLPGKDPKARTKKMTDYGM 60 Query: 51 QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 QLR KQ +K Y ++ EK+FR F EA R G T NLI LE RLD +VYR F T Sbjct: 61 QLREKQHLKWTY-EMLEKQFRKTFDEAARIPGKTGENLIVLLERRLDNVVYRLHFASTRR 119 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYIS 169 A Q V+H HV VNG VNI SYR K+GDVI + + +++ + E + V ++S Sbjct: 120 QASQLVSHGHVFVNGSRVNIRSYRLKDGDVISIGSRGQKMNLIKENLTEYTRAGVAPWLS 179 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ D M TF+ P D+ + L+VE YSR Sbjct: 180 LDPDAMKGTFIIAPKR-SDISELADVNEQLIVELYSR 215 >gi|269114854|ref|YP_003302617.1| 30S ribosomal protein S4 [Mycoplasma hominis] gi|268322479|emb|CAX37214.1| 30S ribosomal protein S4 [Mycoplasma hominis ATCC 23114] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MSK S K RR G +L K + R+ PG HG +R KPS + L + KQK+ Sbjct: 1 MSKFVGSMFKKSRRYGISLLENNKEFTKGKKRTTAPGQHGAKRS-KPSDYQLHMYEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ++E++F+++F + + G T NL+ +ESRLD +V+RA F T ARQ VNH Sbjct: 60 RYMYG-LNERQFKNLFIKVSKKAGVTGINLLQTVESRLDNLVFRAGFARTRAQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H V+G NI S K G VIE+K+ + ++ +A ++ V +++ +N T Sbjct: 119 GHFTVDGCKANIPSMIVKVGSVIELKEALQNNVAIKDAIEVM--TVAPWLT--KENFKVT 174 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + + + +L+VE+Y+R Sbjct: 175 FTRLPERNE---FAKDINESLIVEYYNR 199 >gi|67036084|gb|AAY62968.1| small ribosomal protein subunit 4 [Pilotrichella flexilis] Length = 199 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|3914864|sp|O20291|RR4_TRISA RecName: Full=30S ribosomal protein S4, chloroplastic gi|2293101|emb|CAA92562.1| ribosomal protein S4 [Trimezia stayermarkii] Length = 194 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + + + ++P +++++ +I Sbjct: 116 VDIPSYRCKPQDIITTKDKERSKVLIQNYIASSSHEELPNHLTIDPLQYKGLVNQIIDRK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|315320559|ref|YP_004072616.1| 30S ribosomal protein S4 [Thalassiosira oceanica CCMP1005] gi|283569032|gb|ADB27569.1| 30S ribosomal protein S4 [Thalassiosira oceanica CCMP1005] Length = 205 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 10/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR---RKSKPSYFGLQLRAKQK 57 MS+ K +I RR+G+ K+ ++ PG HG+ K K + +GL+L KQK Sbjct: 1 MSRYRGPKLRITRRLGKLPGLTQKTS--KKTARPGQHGKTLGDGKKKTTEYGLRLEEKQK 58 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +K YG I+E + KEA R +G T L+ LE RLDTI + F PTI AARQ VN Sbjct: 59 LKFNYG-ITESQLYHYIKEARRRKGVTGLILLQLLEMRLDTICFSLGFAPTIAAARQIVN 117 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176 H H+ VN + V+I S++C+ DVI VK KS + + + P ++ ++ + Sbjct: 118 HGHITVNNKVVDIPSFQCQINDVIGVKAKSTSKNIIENNIKTINFIEPPTHLILDKSKLE 177 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T + + + V+E+YSR Sbjct: 178 GTVKNYCDRNELLLDLNELL---VIEYYSR 204 >gi|322719571|gb|ADX07722.1| small ribosomal protein subunit 4 [Grimmia elongata] Length = 198 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSASNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNMNFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|229817706|ref|ZP_04447988.1| hypothetical protein BIFANG_02978 [Bifidobacterium angulatum DSM 20098] gi|229785495|gb|EEP21609.1| hypothetical protein BIFANG_02978 [Bifidobacterium angulatum DSM 20098] Length = 208 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG +SEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-LSEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+++++ ++ G T + ++ LE RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAVYEKGTKTSGQTGNAMLQDLEVRLDNLVLRAGFARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 N SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 NRPSYRVKPGQTIQVKAKSQTMEPFQAAAEGVHRDVLPPVPGYLDVNLASLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + P + VVEFY+R Sbjct: 190 AEE---VPAQVNIQYVVEFYAR 208 >gi|153937935|ref|YP_001392762.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland] gi|171769264|sp|A7GJ02|RS4B_CLOBL RecName: Full=30S ribosomal protein S4 B gi|152933831|gb|ABS39329.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland] gi|295320741|gb|ADG01119.1| 30S ribosomal protein S4 [Clostridium botulinum F str. 230613] Length = 197 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD I YR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIAYRIGFANSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG VNI SY K GDVI +++K ++ + ++ YI ++D + Sbjct: 115 ILVNGSKVNIPSYEVKAGDVITLREKYRKNDEFADNFLSLKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197 >gi|67035803|gb|AAY62832.1| small ribosomal protein subunit 4 [Orthostichidium involutifolium] Length = 199 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY+CK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NSCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|46486578|gb|AAS98725.1| ribosomal protein subunit 4 [Mniodendron dendroides] Length = 199 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S+ ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTAQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ ++ +I Sbjct: 117 NDRLVDIPSYRCKPQDFITIKNRQKSQAIISKNLDFYQKYKIPNHLTYSYLEKKGFVTQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|46486548|gb|AAS98710.1| ribosomal protein subunit 4 [Sciadocladus menziesii] Length = 197 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + + +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFSQKYKIPNHLTYNSLEKKGFVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|548877|sp|P36473|RR4_TRARA RecName: Full=30S ribosomal protein S4, chloroplastic gi|439972|emb|CAA82451.1| ribosomal protein S4 [Tragus racemosus] Length = 196 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD IV+R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKKSTGQVLLQLLEMRLDNIVFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ +P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 QKILDRK---WVGLKINELLVVEY 196 >gi|46811062|gb|AAT01849.1| small ribosomal protein 4 [Verdoornia succulenta] Length = 195 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+P + + + K S + ++L KQK++ +YG + Sbjct: 1 GPRTKVIRRLGTLPGLTDKTPKSRLGH---IDRATSNRKISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ A +++G T L+ LE RLD ++R V TI AARQFVNH HV +NG Sbjct: 57 TERQLLKYVCIARKAKGSTGQMLLQSLEMRLDNTIFRLGMVATIPAARQFVNHGHVSING 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 VNI SY CK GD+I +K + K V + L + ++P +++++ ++ + ++ Sbjct: 117 SRVNIPSYNCKPGDIITMKNQEKSR-LVRNMNLLQKPELPNHLTLDSVQLIGSVNQMIER 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 A---WIDLKINELLVVEYYSR 193 >gi|160946867|ref|ZP_02094070.1| hypothetical protein PEPMIC_00828 [Parvimonas micra ATCC 33270] gi|158447251|gb|EDP24246.1| hypothetical protein PEPMIC_00828 [Parvimonas micra ATCC 33270] Length = 216 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K RR+G N+ G PK+ G R K + +GLQL KQ+++ Sbjct: 18 MAKMMGPRFKQSRRLGLNVCGHPKANKRM-----GKGLARNDKKLTEYGLQLLEKQRLRA 72 Query: 61 YYGDISEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG + EK+FR+ ++A R + T L+ LE+RLD +VYR F +I ARQ V H Sbjct: 73 YYG-VMEKQFRTYVEKALRQKERITGDALVMMLETRLDNLVYRMGFASSIRQARQMVVHG 131 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LVNG+ V+I SY + GD I +++KS+++ E + V YI + + AT Sbjct: 132 HMLVNGKKVDIPSYAVQVGDEITLREKSQKVEMFKENFESTFLGVVPYIE-KKEGLKATL 190 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ +Q +LVVEFYSR Sbjct: 191 TRMPERDE---VPIEIQDSLVVEFYSR 214 >gi|291521873|emb|CBK80166.1| SSU ribosomal protein S4P [Coprococcus catus GD/7] Length = 197 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + V+ +S + G R+KS+ +G QLR KQK K Sbjct: 1 MAREMVPVLKRCRSLGLDPLYLG---VDKKSNRQSIRGNRKKSE---YGNQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ F +A + +G T NL+ LE RLD I++R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYFAKASQMKGQTGENLMVMLECRLDNIIFRLGFARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 V VNG+ VNI SY+ K GDV+E+++K K + ++A R VPE++ + +N+ Sbjct: 114 VSVNGKLVNIPSYQVKPGDVVEIREKFKTSQRYKDILEMAGGRMVPEWLEADQENLKGEV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + V + L+VE YS+ Sbjct: 174 KALPLREQ---IDVPVDEMLIVELYSK 197 >gi|62288925|sp|P69631|RR4_ANDIS RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288947|sp|P69653|RR4_TRIDA RecName: Full=30S ribosomal protein S4, chloroplastic gi|439914|emb|CAA82426.1| ribosomal protein S4 [Bothriochloa ischaemum] gi|439970|emb|CAA82452.1| ribosomal protein S4 [Tripsacum dactyloides] Length = 196 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V ++ +P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196 >gi|46486550|gb|AAS98711.1| ribosomal protein subunit 4 [Mniodendron comatulum] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S+ ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTAQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ ++ +I Sbjct: 117 NDRLVDIPSYRCKPQDFITIKNRQKSQAIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|3914858|sp|O20264|RR4_MORST RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292950|emb|CAA92556.1| ribosomal protein S4 [Moraea spathulata] Length = 194 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 ++I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 MDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPQEELPNHLTIDPIQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|322719555|gb|ADX07714.1| small ribosomal protein subunit 4 [Schistidium apocarpum] gi|322719557|gb|ADX07715.1| small ribosomal protein subunit 4 [Schistidium apocarpum] Length = 198 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMNFSQKYKIPNHLTFNSLENKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|157689460|gb|ABV65286.1| ribosomal protein S4 [Cupaniopsis anacardioides] Length = 196 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K RR+ K P G L Q R K S + ++L KQK++ +YG + Sbjct: 1 GPRFKKIRRLRALPGLTSKRP----GAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 TERQLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D+I + K A + + ++P++++++ +I Sbjct: 116 RIVDIPSYRCKPRDIIAARDDQKSRALIQNYLDSSHHEELPKHLTLHAFQYKGLVNQIID 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 SK---CVGLKINELLVVEYYSR 194 >gi|49182795|gb|AAT57859.1| small ribosomal protein [Scapania nemorea] Length = 195 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+LVN + Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILVNNDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSVNQTVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ECINLKINELLVVEYYSR 193 >gi|49182684|gb|AAT57804.1| small ribosomal protein [Calypogeia muelleriana] Length = 195 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R +G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I V++K K + + + + ++ +P ++S + + + + Sbjct: 117 VDIPSYNCEPGDIITVREKQKSQSIITKNINVFQKLKIPSHLSFDPTELRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIDLKINELLVVEYYSR 193 >gi|67035767|gb|AAY62814.1| small ribosomal protein subunit 4 [Leptotheca boliviana] Length = 197 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGVLPGLTNKTPQLKSNS---INQLTANKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 TEQQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILIND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 RIVDIPSYRCKPQDFITIKDQRKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGVVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + L+VE+YSR Sbjct: 175 -LNRESIDLKINELLIVEYYSR 195 >gi|67035966|gb|AAY62909.1| small ribosomal protein subunit 4 [Porotrichodendron nitidum] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ + +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKISNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|548862|sp|P36451|RR4_BROER RecName: Full=30S ribosomal protein S4, chloroplastic gi|439922|emb|CAA82431.1| ribosomal protein S4 [Bromus erectus] Length = 196 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++V+ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTVDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|66876464|gb|AAY58016.1| Rps4 [Cuscuta sandwichiana] Length = 197 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 13/207 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KSP R R + S + ++L KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTNKSPRAIRDL--------RNNSRSEYRIRLEEKQKLRF 52 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++EK+ + + A +++G T L+ LE RLD I++R T AARQ VNHRH Sbjct: 53 HYG-LTEKQLINYVQIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTXXAARQLVNHRH 111 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNGR VN SYRCK D+I K +K V + +L +++ ++++ Sbjct: 112 VLVNGRLVNRPSYRCKPHDIIMPKNTTKSGVLVQNSLELFTGKELANHLNLFSTPYKGLV 171 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + LVVE+YSR Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195 >gi|322807729|emb|CBZ05304.1| SSU ribosomal protein S4p (S9e) [Clostridium botulinum H04402 065] Length = 197 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD IVYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVN VNI SY K GDVI +++K ++ + ++ YI ++D + Sbjct: 115 ILVNDSKVNIPSYEVKAGDVITLREKYRKNDEFADNFLSLKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197 >gi|116010519|emb|CAL37366.1| ribosomal protein S4 [Ligustrum ovalifolium] Length = 194 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----KAGSDPRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|67035923|gb|AAY62888.1| small ribosomal protein subunit 4 [Hamatocaulis vernicosus] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|328541094|gb|AEB21771.1| ribosomal protein S4 [Bazzania intermedia] Length = 200 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + K+ RR+G K+ S+ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLXXKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A + +G T L+ E RLD ++R PTI ARQ VNH+HV Sbjct: 58 G-LTERQLLKYVRIARKXKGSTGQVLLQSXEMRLDNTIFRLGMAPTIPGARQLVNHKHVA 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY CK GD+I + K K + + + L +P ++ + + + + Sbjct: 117 INNNIVDIPSYNCKPGDIITXRDKQKSQSIITKNINLFXNLKIPSXLTFDSIKLCGSINQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 TINR---EWXNLKINELLVVEYYSR 198 >gi|67036098|gb|AAY62975.1| small ribosomal protein subunit 4 [Helodium blandowii] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|328541060|gb|AEB21754.1| ribosomal protein S4 [Kurzia calcarata] Length = 197 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ Y K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTSKTLKLKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPINK 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I +++K K + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCEPGDIITIREKQKSRSVITKNINLFQNSKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---ELIDLKINELLVVEYYSR 195 >gi|17025862|gb|AAL32096.1| ribosomal protein 4 [Mitthyridium sp. Wall 3859] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ ++ + + P +++ N +I Sbjct: 117 NNSIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|148381346|ref|YP_001255887.1| ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502] gi|153933373|ref|YP_001385723.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397] gi|153936972|ref|YP_001389130.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall] gi|170755963|ref|YP_001783043.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra] gi|171769228|sp|A7FZ00|RS4B_CLOB1 RecName: Full=30S ribosomal protein S4 B gi|172047867|sp|A5I7D0|RS4B_CLOBH RecName: Full=30S ribosomal protein S4 B gi|148290830|emb|CAL84965.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502] gi|152929417|gb|ABS34917.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397] gi|152932886|gb|ABS38385.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall] gi|169121175|gb|ACA45011.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra] Length = 197 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD I YR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIAYRIGFANSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG VNI SY K GDVI +++K ++ + ++ YI ++D + Sbjct: 115 ILVNGSKVNIPSYEVKTGDVITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197 >gi|328541036|gb|AEB21742.1| ribosomal protein S4 [Isolembidium anomalum] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K Y K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T + LE R D + R TI ARQ VNHRH+ + Sbjct: 58 -LTERQSLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I +++K K + + + L +P +++ + + + + Sbjct: 117 NNNIVDIPSYNCELGDIITIREKQKSQSVITKNINLFRNLKIPSHLTFDSIKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197 >gi|49182766|gb|AAT57845.1| small ribosomal protein [Neotrichocolea bissetii] gi|49182809|gb|AAT57866.1| small ribosomal protein [Temnoma pulchellum] Length = 195 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N + Sbjct: 57 RQLLKYVCIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY C+ GD+I ++ K K + + L ++ +P +++ + + + ++ Sbjct: 117 VNIPSYNCEPGDIITIRNKEKSQSIITRNINLFQKLKIPNHLTFDSTQLRGSVNQMIHR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIHLKINELLVVEYYSR 193 >gi|86438870|emb|CAJ55407.1| small ribosomal protein 4 [Plagiochila acanthocaulis] Length = 195 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCELGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVV 201 ++ + + + LVV Sbjct: 177 NQMINR---EWINLKINELLVV 195 >gi|157689450|gb|ABV65281.1| ribosomal protein S4 [Connarus conchocarpus] Length = 195 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K RR+G K P+ G Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PHFKKIRRLGALPGLTSKRPI----AGNDFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 56 ERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVYHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I + + K A + A ++P+++++ +I S Sbjct: 116 RVDIPSYRCKPRDIITARDEQKSRALIQNYLDSSAHEELPKHLTLYPLQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WVGLKINELLVVEYYSR 193 >gi|24473812|gb|AAL82749.1| small ribosomal subunit protein 4 [Bryum argenteum] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKAPQLKTNS---INQSIFNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|157689526|gb|ABV65319.1| ribosomal protein S4 [Neurada procumbens] Length = 192 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 9/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTSKKP----RAGSDLRSQSRPGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D+I + + K A + + ++P++++++ +I Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNYLDSSTHEELPKHLTLHTLQYKGLVNQIIDRK-- 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 -WVGLKINELLVVEYYSR 190 >gi|12642226|gb|AAK00195.1| rps4 [Entosthodon laevis] gi|39546757|gb|AAR28105.1| small ribosomal protein 4 [Entosthodon laevis] gi|67035726|gb|AAY62794.1| small ribosomal protein subunit 4 [Entosthodon laevis] Length = 193 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S Q K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGVLPGLTNKIPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V Sbjct: 56 QLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 116 DIPSYRCKPDDSITIKNRQKSQAIITKNIDFSQKSKVPNHLTFNSTQKKGLVNQI---LD 172 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 RESIGLKINELLVVEYYSR 191 >gi|78369629|gb|ABB43044.1| ribosomal protein 4 [Calymperes palisotii] Length = 201 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P S ++ K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 59 G-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SY+CK D I +K + K +++ + + +P +++ N + Sbjct: 118 VNNRIVNIPSYQCKPQDFITIKDQQKYQTMIVKNINFSPKYKIPSHLTFNSVEKKGLVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199 >gi|62288945|sp|P69651|RR4_SISSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288946|sp|P69652|RR4_SISST RecName: Full=30S ribosomal protein S4, chloroplastic gi|2293074|emb|CAA92560.1| ribosomal protein S4 [Sisyrinchium sp. 'Lejeune 1997'] gi|2293081|emb|CAA92561.1| ribosomal protein S4 [Sisyrinchium striatum] Length = 194 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDLFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|80974172|gb|ABB53779.1| small ribosomal subunit protein 4 [Ptychomnion cygnisetum] gi|92417459|gb|ABE76825.1| ribosomal protein subunit 4 [Ptychomnion cygnisetum] Length = 200 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SYRCK D I +K + + + ++ +P +++ + + Sbjct: 117 VNDSIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNK 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|49182688|gb|AAT57806.1| small ribosomal protein [Cephaloziella hirta] gi|49182728|gb|AAT57826.1| small ribosomal protein [Cephaloziella varians] Length = 195 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNSNL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K K K + + + ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLTQLQGSINQKVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|63191736|gb|AAY34828.1| small ribosomal protein subunit 4 [Leptotheca gaudichaudii] Length = 198 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 NHIVDIPSYRCKPQDFITIKDRQKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|47606904|gb|AAT36372.1| ribosomal protein subunit 4 [Hymenodon pilifer] gi|67035765|gb|AAY62813.1| small ribosomal protein subunit 4 [Hymenodon pilifer] Length = 199 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P + ++ K S + ++L KQK++ YYG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKTPQLKSNS---INQLTSNKKISQYRIRLEEKQKLRFYYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K V + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNRRKSQTIVNKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197 >gi|548871|sp|P36465|RR4_MELAL RecName: Full=30S ribosomal protein S4, chloroplastic gi|439954|emb|CAA82444.1| ribosomal protein S4 [Melica altissima] Length = 196 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G L K+P + + H K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALLGLTRKTPKSGSNPKKKFH----SGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVYIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|298253340|ref|ZP_06977132.1| ribosomal protein S4 [Gardnerella vaginalis 5-1] gi|297532735|gb|EFH71621.1| ribosomal protein S4 [Gardnerella vaginalis 5-1] Length = 236 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 39 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 97 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 98 QLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNLV 157 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+V+ KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 158 DRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 217 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + VVE+Y+R Sbjct: 218 VDQ---IPVEVNIQYVVEYYAR 236 >gi|283455919|ref|YP_003360483.1| 30S ribosomal protein S4 [Bifidobacterium dentium Bd1] gi|306822876|ref|ZP_07456252.1| 30S ribosomal protein S4 [Bifidobacterium dentium ATCC 27679] gi|309801331|ref|ZP_07695460.1| ribosomal protein S4 [Bifidobacterium dentium JCVIHMP022] gi|283102553|gb|ADB09659.1| 30S ribosomal protein S4 [Bifidobacterium dentium Bd1] gi|304553508|gb|EFM41419.1| 30S ribosomal protein S4 [Bifidobacterium dentium ATCC 27679] gi|308222220|gb|EFO78503.1| ribosomal protein S4 [Bifidobacterium dentium JCVIHMP022] Length = 208 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T + +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + PV + VVEFY+R Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208 >gi|162415076|gb|ABX89112.1| ribosomal protein S4 [Syntrichia princeps] Length = 202 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S + K S + ++L KQK++ +YG Sbjct: 4 YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 60 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 61 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 119 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 120 NNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 179 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 ---LDQESIGLKINELLVVEYYSR 200 >gi|83940939|gb|ABC48866.1| rps4 [Sinojackia huangmeiensis] gi|83940941|gb|ABC48867.1| rps4 [Sinojackia rehderiana] gi|83940943|gb|ABC48868.1| rps4 [Sinojackia microcarpa] gi|83940949|gb|ABC48871.1| rps4 [Sinojackia xylocarpa] Length = 194 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P+ G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + + K A + + + ++P+++++ +I S Sbjct: 116 VDIPSYRCKPRDIITARDEQKSRALIQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|548876|sp|P36472|RR4_STICA RecName: Full=30S ribosomal protein S4, chloroplastic gi|439966|emb|CAA82450.1| ribosomal protein S4 [Stipa capensis] Length = 196 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTVEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|3914865|sp|O20399|RR4_WATAN RecName: Full=30S ribosomal protein S4, chloroplastic gi|2293114|emb|CAA92563.1| ribosomal protein S4 [Watsonia angusta] Length = 195 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 LQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WIGLKINELLVVEYYSR 193 >gi|3914849|sp|O20219|RR4_GLAMU RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292882|emb|CAA92553.1| ribosomal protein S4 [Gladiolus murielae] Length = 195 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WIGLKINELLVVEYYSR 193 >gi|111283694|gb|ABH09197.1| small ribosomal protein 4 [Jackiella curvata] Length = 198 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ SY + K S + L+L KQK++ +YG Sbjct: 1 RGPRVKILRRLGALPGLTSKTLKPKSSY---VDRSTSNKKISQYRLRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 LTEQQLLKYVRVARKAKGSTGQILLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SY + GD+I VK K + + + + L ++ +P +++ + + + Sbjct: 117 NDIVNIPSYNRESGDIITVKNKLRSQSIITKNLNLFQKLKIPSHLTFDSTKLRGYVNQKI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWVDLKINELLVVEYYSR 196 >gi|24473838|gb|AAL82763.1| small ribosomal subunit protein 4 [Bryum funckii] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035742|gb|AAY62802.1| small ribosomal protein subunit 4 [Dicranoweisia crispula] Length = 194 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K K A + + +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNGQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|46486544|gb|AAS98708.1| ribosomal protein subunit 4 [Powellia involutifolia] Length = 200 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTNKTFQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYIRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K K A + ++ +P +++ + + Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDGQKSQAITSKNIDFYQKYKIPNHLTYSSLEKKGFVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198 >gi|63191739|gb|AAY34829.1| small ribosomal protein subunit 4 [Mesochaete undulata] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N + V+I SY+CK D I +K + K A + + ++ +P ++ + +I Sbjct: 117 NDQIVDIPSYQCKPQDFITIKDRQKSQAIISKNIYFYQKYKIPNHLIYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|83416510|gb|ABC18275.1| small ribosomal subunit protein 4 [Rhytidiadelphus squarrosus] Length = 198 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQKKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|63191741|gb|AAY34830.1| small ribosomal protein subunit 4 [Calomnion complanatum] Length = 200 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 2 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 59 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 118 NDRIVDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198 >gi|49182710|gb|AAT57817.1| small ribosomal protein [Gymnomitrion concinnatum] Length = 195 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN Sbjct: 57 RQLLKYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYSCELGDIITVKSKQKSQSIITKNVNLFQKLKIPGHLTFDSIELRGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|328541138|gb|AEB21793.1| ribosomal protein S4 [Telaranea tetrapila] Length = 198 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K +Y K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGAPPGLTSKILKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHILINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GDVI +K K + + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYDCESGDVITIKDKQRSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|226950856|ref|YP_002805947.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto] gi|226841576|gb|ACO84242.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto] Length = 197 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD IVYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVN VNI SY K GDVI +++K ++ + ++ YI ++D + Sbjct: 115 ILVNDSKVNIPSYEVKTGDVITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197 >gi|20531128|gb|AAM27384.1| ribosomal protein 4 [Encalypta intermedia] Length = 194 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +V+R PTI ARQ VNHRHVLVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I ++ + K A +++ +++ VP ++S + +I L Sbjct: 117 NIPSYRCKPQDFISIRDRQKSQAIIIKNIDFSQKSKVPNHLSFDSLQKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63101001|gb|AAY33125.1| small ribosomal protein 4 [Conardia compacta] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTHQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYSKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67036040|gb|AAY62946.1| small ribosomal protein subunit 4 [Cirriphyllum cirrosum] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|80974138|gb|ABB53762.1| small ribosomal subunit protein 4 [Euptychium cuspidatum] Length = 202 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLQGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITEQQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTISGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN VNI SYRCK D I VK + + + ++ +P +++ Sbjct: 117 ILVNDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NKI---LDRESIGLKINELLVVEYYSR 200 >gi|11878067|gb|AAG40782.1| small ribosomal protein 4 [Haplomitrium mnioides] Length = 197 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 7/202 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G L G + +RS +K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGT-LPGLTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD +++R TI ARQ VNHRH+++N Sbjct: 57 LTERQLLRYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184 ++V+ Y C+ D+I K + + + + +P ++ ++ V +I Sbjct: 117 YKTVDAPGYNCEPRDIITTKNPMESRLGMAKGMDFIQSKIPNHLFLDSSKGVGLVNQIID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWISLKINELLVVEYYSR 195 >gi|3098174|gb|AAC15535.1| small ribosomal protein 4 [Leptostomum macrocarpum] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTFNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLXEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKFQAIISKNIDFYQKYKTPNHLTYNXLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|6002067|emb|CAA58941.1| ribosomal protein S4 [Nardus stricta] Length = 196 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSVASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|37992707|gb|AAR06532.1| small ribosomal protein 4 [Trachyxiphium drepanophyllum] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G L G + +S K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGV-LPGLTNKILELKSSSITQ--STSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++V Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A V + + ++ +P +++ N +I Sbjct: 117 NDYIVNIPSYRCKPQDFITIKNQQKSEAIVNKNIEFYQKTKIPNHLTYNFLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035919|gb|AAY62886.1| small ribosomal protein subunit 4 [Callialaria curvicaulis] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K K K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNKLKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|328541152|gb|AEB21800.1| ribosomal protein S4 [Lepidozia cupressina] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 9/203 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ SY K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV-N 124 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ + N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNIVDIPSYNCEPGDIITIRDKQKSRSIIAKNVNLFQNLKIPSHLTFDSIKLCGSINQTI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWINLKINELLVVEYYSR 196 >gi|222103462|gb|ACM44260.1| small ribosomal protein subunit 4 [Haplocladium microphyllum] Length = 203 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 6 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 61 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 62 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVN 121 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 122 DCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 180 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 --LDRESIGLKINELLVVEYYSR 201 >gi|49182801|gb|AAT57862.1| small ribosomal protein [Kymatocalyx madagascariensis] Length = 195 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+ Y + K S + ++L KQK++ +YG ++E+ Sbjct: 2 CKIIRRLGGLPGLTSKTLKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN V Sbjct: 58 QLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNNLV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY C+ GD+I +K K K + + + ++ +P +++ + + + + + Sbjct: 118 DIPSYNCEPGDIITIKNKQKSQSIISKNLNSGQKSKIPSHLTFDLTQLQGSINQKVNR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -EWVNLKINELLVVEYYSR 193 >gi|6002029|emb|CAA58921.1| ribosomal protein S4 [Arundo donax] Length = 196 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD IV+R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNIVFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + ++ +P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 ++ + + LVVE+ Sbjct: 176 QKVLDRK---WVGLKINELLVVEY 196 >gi|29422377|gb|AAO84584.1| small ribosomal protein 4 [Plagiomnium cuspidatum] Length = 197 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D+I +K + K + + ++ +P +++ N N +I Sbjct: 117 RLVDIPSYRCKPQDLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILD 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RD---SIDLKINELLVVEYYSR 195 >gi|93213402|gb|ABF01127.1| ribosomal protein subunit 4 [Entodon hampeanus] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035791|gb|AAY62826.1| small ribosomal protein subunit 4 [Pterigynandrum filiforme] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 NYCMVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDREAIGLKINELLVVEYYSR 197 >gi|291059705|gb|ADD72440.1| ribosomal protein S4 [Treponema pallidum subsp. pallidum str. Chicago] Length = 260 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 119/209 (56%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQK 57 M+ + ++ KI RR+G N++G PK + + PG HG ++++K S +G QL+ KQK Sbjct: 57 MAVKR-ARGKIVRRLGINIFGNPKYTRLLGKKPAPPGKEHGVKQRAKVSVYGEQLKEKQK 115 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + YG +SE++FR++F +A R +G T +N++S +E RLD V+R F + ARQ V+ Sbjct: 116 FRFAYG-MSERQFRNLFAQAHRMKGVTGNNMLSLMERRLDNTVFRMGFAISRVQARQMVS 174 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 HR+ L+NG++ NI S R DVI K + + + L++ +++V+ + + A Sbjct: 175 HRYFLINGKTANIPSMRISAHDVITTKNRKGIHSIIRHNLTLSQGQRGSWLNVDEEQLSA 234 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P + P +VE+YSR Sbjct: 235 TVSELPRAQDIHPVG---NIQHIVEYYSR 260 >gi|67035696|gb|AAY62779.1| small ribosomal protein subunit 4 [Bryomanginia saint-pierrei] Length = 195 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 10/203 (4%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183 N R +NI SYRCK D I +K + K A V + + VP +++ N +I Sbjct: 117 NNRIINIPSYRCKPQDFITIKDQQKFQAMVNFS---QKYKVPNHLTFNSLEKKGLVNQI- 172 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + L+VE+YSR Sbjct: 173 --LDHESIGLKINELLIVEYYSR 193 >gi|67036038|gb|AAY62945.1| small ribosomal protein subunit 4 [Myuroclada maximowiczii] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|18920753|gb|AAL82421.1| ribosomal protein system 4 [Myurella acuminata] Length = 198 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQKKSEAIISKNIESYQKYKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|216263496|ref|ZP_03435491.1| ribosomal protein S4 [Borrelia afzelii ACA-1] gi|215980340|gb|EEC21161.1| ribosomal protein S4 [Borrelia afzelii ACA-1] Length = 208 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ SK K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKQISKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T NL+S LE R+D IVYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNIVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 V++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 120 GIVILNGRRVTIPSIILRANDQIKIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|49182675|gb|AAT57800.1| small ribosomal protein [Balantiopsis diplophylla] Length = 195 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD I V+ + K + + + L + +P +++ + + + + Sbjct: 117 VDIPSYNCEPGDNITVRNRQKSQSIITKNINLFQNSKIPSHLTFDSTKLRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ELINLKINELLVVEYYSR 193 >gi|63191665|gb|AAY34794.1| small ribosomal protein subunit 4 [Rozea pterogonioides] Length = 202 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRXDNVIFRLGMAPTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I VK + K + + + ++ +P +++ + + Sbjct: 119 VNDYMVDIPSYRCKPQDFITVKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200 >gi|3098184|gb|AAC15540.1| small ribosomal protein 4 [Pohlia cruda] Length = 198 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K + + + +P +++ N N +I Sbjct: 117 DRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYRKYKIPNHLTYNSLNKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196 >gi|225351919|ref|ZP_03742942.1| hypothetical protein BIFPSEUDO_03523 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157166|gb|EEG70505.1| hypothetical protein BIFPSEUDO_03523 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 208 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T + ++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGQTGNAMLIDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGTHRDVLPPVPGYLDVNLPSLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + PV + VVEFY+R Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208 >gi|37548857|gb|AAO32697.1| ribosomal protein 4 [Pogonatum dentatum] Length = 196 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 10/200 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKYYGDISE 67 KI RR+G K+P PG Q K S + ++L KQK++ +YG I+E Sbjct: 3 CKIIRRLGALPGLTNKTPQLK----PGYMNQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN Sbjct: 58 RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + + + +++ +P +++ N +I L Sbjct: 118 VNIPSYRCKPQDFITIKDRQESQVIIDKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 DRESIGLKINELLVVEYYSR 194 >gi|47606886|gb|AAT36363.1| ribosomal protein subunit 4 [Calomnion brownseyi] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63191726|gb|AAY34823.1| small ribosomal protein subunit 4 [Fleischerobryum longicolle] Length = 197 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 RIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|222103496|gb|ACM44277.1| small ribosomal protein subunit 4 [Brachythecium rutabulum] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035584|gb|AAY62723.1| small ribosomal protein subunit 4 [Kiaeria glacialis] Length = 194 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNGRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|121761859|gb|ABM65015.1| ribosomal protein S4 [Plagiomnium rhynchophorum] Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGPTNKTPQLKSSS---INHSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R ++I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 NDRLIDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 LDRD---FIDLKINELLVVEYYSR 197 >gi|222103548|gb|ACM44303.1| small ribosomal protein subunit 4 [Ptilium crista-castrensis] Length = 202 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSPLRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN V+I SYRCK D I +K + K + + ++ ++P +++ + Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINRNIEFYQKSEIPNHLTYSSLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200 >gi|37992575|gb|AAR06466.1| small ribosomal protein 4 [Lepidopilidium portoricense] Length = 199 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSVSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++V Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P Y++ N +I Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKIKIPNYLTYNFVEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|32423695|gb|AAP81238.1| ribosomal protein S4 [Candidatus Portiera aleyrodidarum] Length = 203 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 19/213 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++ PG + ++ +++ + +G QLR Sbjct: 1 MARYLGPKCKLSRREGTDLFLKSGMVSIEEKCKIDK---IPGQN-KKHRTRITEYGKQLR 56 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+++ YG + EK+F++ +K+A +++G L+ LESRLD IVYR F T AR Sbjct: 57 EKQKVRRIYGVL-EKQFKNYYKKAAKNKGAKGEYLLQSLESRLDNIVYRMGFSVTRAEAR 115 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173 Q VNH+ + VNGR VNI SY+ GD I ++ KS + A +A + +++ V+ Sbjct: 116 QLVNHKTIKVNGRIVNISSYKVTVGDCISIRAKSMNQTRIKNALAIANK--VKWVHVDEK 173 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M +PS + L+VE YS+ Sbjct: 174 KMEGIVKYLPSK-----ISTDINEKLIVELYSK 201 >gi|168181943|ref|ZP_02616607.1| 30S ribosomal protein S4 [Clostridium botulinum Bf] gi|182674732|gb|EDT86693.1| 30S ribosomal protein S4 [Clostridium botulinum Bf] Length = 197 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD IVYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVN VNI SY K GDVI +++K ++ + ++ YI ++D + Sbjct: 115 ILVNDSKVNIPSYEVKIGDVITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KQPERDE---IPIDANETLVVELYSK 197 >gi|66866225|gb|AAY57783.1| small ribosomal protein 4 [Meesia triquetra] Length = 206 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 13/210 (6%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 2 RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 59 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMV 176 VN R V+I SYRCK D I +K + K A + + + ++ +P +++ N Sbjct: 118 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNIEFYQKYKIPNHLTYNSLKKQ 177 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 178 GLVNQI---LNRESIDLKINELLVVEYYSR 204 >gi|168178912|ref|ZP_02613576.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916] gi|182670114|gb|EDT82090.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916] Length = 197 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD IVYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQIVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVN VNI SY K GDVI +K+K ++ + ++ YI ++D + Sbjct: 115 ILVNDSKVNIPSYEVKIGDVITLKEKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KQPERDE---IPIDANETLVVELYSK 197 >gi|83940945|gb|ABC48869.1| rps4 [Changiostyrax dolichocarpa] Length = 194 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P+ G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + + K A V + + ++P+++++ +I S Sbjct: 116 VDIPSYRCKPRDIITARDEQKSRALVQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|290487078|gb|ADD29923.1| ribosomal protein S4 [Phoradendron serotinum] Length = 202 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 16/211 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 MS+ + K RR+G K P + + G K S++ ++L KQ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRSGSDIRNPFPSGK-------KRSHYRIRLEEKQ 53 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K++ +Y ++E++ + A +++G + L+ LE RLD I++R TI ARQ + Sbjct: 54 KLRFHYC-LTERQLLKYVRIAGKAKGASGRVLLQLLEMRLDNILFRLGMTSTISGARQLI 112 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNM 175 NHRH+LVN R V+I SYRCK ++I + + K + + +++P++++++ Sbjct: 113 NHRHILVNERIVDIPSYRCKPQEIITARNEKKSQVLIQNHVDSSSHKELPKHLTLHPFQY 172 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 173 KGFVNQIIDSQ---WVGLKINELLVVEYYSR 200 >gi|148272986|ref|YP_001222547.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|172047226|sp|A5CRZ7|RS4_CLAM3 RecName: Full=30S ribosomal protein S4 gi|147830916|emb|CAN01860.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 209 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 R SK ++ R +G L + + R Y PG HG+ ++ + S + ++LR KQ+++ YG Sbjct: 6 RTRSKTRLSRALGIPLTPKAAKYLEKRPYAPGEHGRSKRKQDSDYAVRLREKQRLRAQYG 65 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I E + + F+EA R++G T NL+ LE RLD +V R+ T ARQ V HRH++V Sbjct: 66 -IREAQLKIAFQEARRTQGLTGENLVEILEQRLDALVVRSGLARTTAQARQLVVHRHIMV 124 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATF 179 +G+ V+ S+R K G +I VK +S+ A+ DV P Y+ V D + A Sbjct: 125 DGKIVDRPSFRVKAGQMIHVKPRSEGTEPFQVAAAGGHADVLPKLPSYLEVELDKLQARL 184 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + PV + LVVE+Y Sbjct: 185 VRLPKRAE---VPVTCEVQLVVEYY 206 >gi|77862517|gb|ABB04531.1| small ribosomal protein 4 [Conocephalum conicum] Length = 201 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ + Y ++ K S + ++L KQK++ ++G Sbjct: 4 RGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHFG- 59 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 60 LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILIN 119 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 +V+I SY CK DVI +K + K + + + + ++ +P ++S + + +I Sbjct: 120 NITVDIPSYNCKPKDVITIKDRQKSQSIITKNLKSFQKSKIPNHLSFDLIQIKGLVNQII 179 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 180 DR---EWIYLKINELLVVEYYSR 199 >gi|66866210|gb|AAY57778.1| small ribosomal protein 4 [Breutelia pendula] Length = 207 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 13/210 (6%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMV 176 VN R V+I SYRCK D I +K + K A + D +P +++ N Sbjct: 119 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYNSLENK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 179 GLVNQI---LDRESIGLKINELLVVEYYSR 205 >gi|222103526|gb|ACM44292.1| small ribosomal protein subunit 4 [Brachythecium plumosum] Length = 204 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 6 YRGPRVRIIRRLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 62 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 63 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 121 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 122 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 181 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 182 ---LDRESIGLKINELLVVEYYSR 202 >gi|49182718|gb|AAT57821.1| small ribosomal protein [Harpanthus scutatus] Length = 195 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGALPGLTSKTLKPKSSY---VDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + + L ++ +P +++ N + + + + Sbjct: 117 VDIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFNSIELRGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|42556458|gb|AAS19824.1| small ribosomal protein 4 [Mastigophora woodsii] gi|118626065|emb|CAL39337.1| small ribosomal protein 4 [Mastigophora woodsii] Length = 191 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTEQQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + + L ++ +P +++ + + + +I + Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGSINQIINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IHLKINELLVVEYYSR 189 >gi|3098262|gb|AAC15579.1| small ribosomal protein 4 [Thamnobryum alopecurum] Length = 198 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E R D I++R PTI ARQ VNH H+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHGHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|62288924|sp|P69630|RR4_ALOPR RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288932|sp|P69638|RR4_CINLA RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288934|sp|P69640|RR4_DESFL RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288939|sp|P69645|RR4_LAMAU RecName: Full=30S ribosomal protein S4, chloroplastic gi|439920|emb|CAA82425.1| ribosomal protein S4 [Alopecurus pratensis] gi|439930|emb|CAA82433.1| ribosomal protein S4 [Cinna latifolia] gi|439932|emb|CAA82435.1| ribosomal protein S4 [Avenella flexuosa] gi|439948|emb|CAA82441.1| ribosomal protein S4 [Lamarckia aurea] gi|6002079|emb|CAA58949.1| ribosomal protein S4 [Sesleria caerulea] Length = 196 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNFIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|548859|sp|P36447|RR4_ANTOD RecName: Full=30S ribosomal protein S4, chloroplastic gi|439918|emb|CAA82427.1| ribosomal protein S4 [Anthoxanthum odoratum] Length = 196 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKDLVRNSIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|304439715|ref|ZP_07399614.1| 30S ribosomal protein S4 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371790|gb|EFM25397.1| 30S ribosomal protein S4 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 203 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 +K + K RR+G N+ G PK+ R K + +G QL KQ+++ Y Sbjct: 7 AKMMGPRFKESRRLGLNVCGHPKANKRMTKGT-----ARSDKKLTEYGKQLLEKQRLRAY 61 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + EK+F ++FKEA ++ T L+ FLE RLD + YR F +I ARQ V+H HV Sbjct: 62 YGVL-EKQFVNLFKEAKKAPEQTGTALVQFLEMRLDNLAYRMGFANSIRQARQLVSHGHV 120 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181 VNG+ +NI SYRCK GDVI + + + A E + YIS + N AT Sbjct: 121 HVNGKKLNIPSYRCKPGDVISLSPRGMKSAIFKENFETNFVTSYPYISKD-KNFKATLTS 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 +P P+ ++ L+VEFYS+ Sbjct: 180 VPGR---EDIPIEIEDQLIVEFYSK 201 >gi|18920731|gb|AAL82410.1| ribosomal protein system 4 [Bardunovia baicalensis] Length = 197 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + +++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKNKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|282855416|ref|ZP_06264737.1| ribosomal protein S4 [Pyramidobacter piscolens W5455] gi|282586712|gb|EFB91959.1| ribosomal protein S4 [Pyramidobacter piscolens W5455] Length = 206 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 10/207 (4%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 ++ + K KI RR+G N++G PK + ++ PG RR++K S +GLQL+ KQK++ Sbjct: 7 RKVTPKGKIVRRLGANVFGNPKYDKLLAKKATPPGG-APRRRAKQSIYGLQLQEKQKIRL 65 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+ R+++ A + G T N++ LESR D +VYR + T ARQ V H H Sbjct: 66 AYG-VSEKQLRAVYVAAKKMDGVTGSNMLILLESRFDNVVYRLGYCVTRPQARQLVRHGH 124 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 LVNGR V++ R GDV+ V++ S ++ + + + A P ++++ T Sbjct: 125 FLVNGRKVDMPGVRLNPGDVVTVRENSAEMVVLKQNLEAAAAVSKPAWLTLEGGK--GTI 182 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P P I +VVEFYS+ Sbjct: 183 VRLPERAD---IPNIADEQVVVEFYSK 206 >gi|24473814|gb|AAL82750.1| small ribosomal subunit protein 4 [Imbribryum blandum] Length = 196 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLK------INQSISNKKISQYRIRLEEKQKLRFHYG 54 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ V+HRH+LV Sbjct: 55 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILV 113 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 114 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 173 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 ---LDRESIGLKINELLVVEYYSR 194 >gi|3098228|gb|AAC15562.1| small ribosomal protein 4 [Fontinalis antipyretica] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + +L ++ +P +++ +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEALISKNIELYKKYKIPNHLTYISLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035568|gb|AAY62715.1| small ribosomal protein subunit 4 [Cnestrum alpestre] Length = 198 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A +++ +++ VP +++ N +I Sbjct: 117 DRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKQGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQELIGLKINELLVVEYYSR 196 >gi|17025822|gb|AAL32078.1| ribosomal protein 4 [Syrrhopodon apertus] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKISQLKSSS---INQSTPNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKIKGSTGKVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ + + + +P +++ N +I Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKIPNHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|63101089|gb|AAY33169.1| small ribosomal protein 4 [Orthorrhynchium elegans] Length = 198 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S+ +H K S + ++L KQK++ +YG Sbjct: 1 RGPRMRIIRRLGTLPGLTNKTPQLKSSF---IHQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI+ ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIYGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + A + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQQNSEALINKNIDFYKKYKIPNHLTYSFLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|154498912|ref|ZP_02037290.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC 29799] gi|150271752|gb|EDM98978.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC 29799] Length = 200 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 106/208 (50%), Gaps = 10/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K K R +G + + + G + K S + LQL KQK+K Sbjct: 1 MAKNMQPIAKRCRALGISPAAMGYAKKESNRNPGGQ----MRKKKSEYALQLSEKQKVKF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FRS +++A R G T NL+ +E RLD VYR F T ARQ VNH H Sbjct: 57 VYG-IMEKQFRSYYEKAARMPGKTGDNLLVLVERRLDNAVYRLGFANTRREARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMVAT 178 VNG+ V+I SY K GDVIEVK+ S+ A + +P+++ + + T Sbjct: 116 FTVNGQRVDIPSYLVKAGDVIEVKEGSRSSAKFKKLTGEDAPNVLLPQWLEREKNTLKGT 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P +DV PV + +L+VE YS+ Sbjct: 176 VTKLPVR-EDVDLPV--EEHLIVELYSK 200 >gi|229915463|gb|ACQ90808.1| ribosomal protein S4 [Oocystis solitaria] Length = 202 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + S+ +I RR+G+ + TR PG HG KPS +G++L+ KQK++ Sbjct: 1 MSRYKGSRLRIIRRLGKLPGFT--TKTTTRKERPGQHG-TSFKKPSQYGIRLQEKQKIRY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E++ ++A + +G T NL+ LE RLD I++R F PTI AARQ + H H Sbjct: 58 NYG-ITERQLIRYVRQARKIKGSTGENLLQLLEMRLDNILFRFGFAPTIVAARQLITHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 LVN + V I SY+C ++I + +K K + + Q E VP ++ ++ N++ T Sbjct: 117 FLVNNKKVTIPSYQCVSKEIISIAKKQKSVNLIKNFLLQSNETLVPPHLILDKQNLIGTI 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + L+VEFYSR Sbjct: 177 NSTVNRQ---FIGLQLNELLIVEFYSR 200 >gi|12642224|gb|AAK00194.1| rps4 [Entosthodon bonplandii] Length = 194 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S Q K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGVLPGLTNKTPQLRSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN Sbjct: 56 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I VK + K A + + + +++ VP +++ + +I L Sbjct: 116 VDIPSYRCKPEDFITVKNRKKSQAIITKNTYFSQKSKVPNHLTFDFTQKKGLVTQI---L 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 DRESIGLKINELLVVEYYSR 192 >gi|67036014|gb|AAY62933.1| small ribosomal protein subunit 4 [Neodolichomitra yunnanensis] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + + +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFHPKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63191677|gb|AAY34800.1| small ribosomal protein subunit 4 [Homaliodendron piniforme] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + ++ ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNTEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|29422399|gb|AAO84595.1| small ribosomal protein 4 [Leiomela aristifolia] Length = 198 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 XRIVDIPSYRCKPXDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSXENKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|67035921|gb|AAY62887.1| small ribosomal protein subunit 4 [Cratoneuron filicinum] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K K K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNKLKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|255659528|ref|ZP_05404937.1| ribosomal protein S4 [Mitsuokella multacida DSM 20544] gi|260848081|gb|EEX68088.1| ribosomal protein S4 [Mitsuokella multacida DSM 20544] Length = 197 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 97/207 (46%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G +S + R +R K S +G QL+ KQK K Sbjct: 1 MAIDRVPALKRCRALGLEPAVIGRSKESKRQL------RRTNRKVSEYGTQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + +A + +G T NL+ LE RLD +VYR T ARQ V H H Sbjct: 55 IYGVL-EKQFRGYYDKAKKMQGVTGENLLGLLERRLDNVVYRLGLANTRRQARQLVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I S GDVI V +KS+ A E + + P ++ + N+ T Sbjct: 114 FTVNGKRVDIPSALVNAGDVIAVAEKSQSNAFFKELKESSNALSAPAWLQADQANLTGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + V + +VE YS+ Sbjct: 174 TRFPNRDE---IDVPVNEQAIVELYSK 197 >gi|67036044|gb|AAY62948.1| small ribosomal protein subunit 4 [Trachybryum megaptilum] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035941|gb|AAY62897.1| small ribosomal protein subunit 4 [Leptodon longisetus] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A R++G T L+ E R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARRAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + +L ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|261367775|ref|ZP_05980658.1| ribosomal protein S4 [Subdoligranulum variabile DSM 15176] gi|282570573|gb|EFB76108.1| ribosomal protein S4 [Subdoligranulum variabile DSM 15176] Length = 200 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K R +G + G K N G + + K S + QL KQK+ Sbjct: 1 MAKNTQPIAKRCRALGISPAVMGYGKKTTNRNP------GGQMRKKKSEYATQLNEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I EK+F + ++ A R G T NL+ +E RLD +VYR F T ARQ V+H Sbjct: 55 KFVYG-ILEKQFHTYYETATRMPGQTGVNLLVLVERRLDNVVYRLGFAKTRRDARQLVSH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS--QLAERDVPEYISVNHDNMV 176 H VNG+ VNI SY K GDVIEV + S+ + +P ++ + + + Sbjct: 114 NHFTVNGKRVNIPSYLVKPGDVIEVIESSRSSVKFSKLLGEDAPVVLLPSWLERDKNALK 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T V++P +D+ P+ +L+VE YS+ Sbjct: 174 GTVVKMPVR-EDIDVPIA--EHLIVELYSK 200 >gi|63145915|gb|AAY33895.1| small ribosomal protein 4 [Pallavicinia rubristipa] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G L G + +RS K S + ++L KQK++ +YG + Sbjct: 3 GPRAKIIRRLGA-LPGLSHKMLGSRSSYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-L 58 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH+L+N Sbjct: 59 TERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILINK 118 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPS 184 +VNI SY CK DVI ++ + + + + + L E+ +P +++ + + +I Sbjct: 119 NTVNIPSYNCKPRDVITIRNRHESQSVITKNINLFQEQRIPNHLTFDSTRFCGSVNQIID 178 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 R---EWIGLKINELLVVEYYSR 197 >gi|33413261|emb|CAD86765.1| ribosomal protein small subunit 4 [Orthomniopsis dilatata] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 LDRN---SIDLKINELLVVEYYSR 197 >gi|237796865|ref|YP_002864417.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657] gi|229261841|gb|ACQ52874.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657] Length = 197 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD IVYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVN VNI SY K GDVI +++K ++ ++ YI ++D + Sbjct: 115 ILVNDSKVNIPSYEVKIGDVITLREKYRKNDEFANNFLALKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P+ LVVE YS+ Sbjct: 175 KQPERDE---IPIDANETLVVELYSK 197 >gi|222103562|gb|ACM44310.1| small ribosomal protein subunit 4 [Thuidium tamariscinum] Length = 203 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKISQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|170781158|ref|YP_001709490.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp. sepedonicus] gi|189045370|sp|B0REK0|RS4_CLAMS RecName: Full=30S ribosomal protein S4 gi|169155726|emb|CAQ00847.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp. sepedonicus] Length = 209 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 R SK ++ R +G L + + R Y PG HG+ ++ + S + ++LR KQ+++ YG Sbjct: 6 RTRSKTRLSRALGIPLTPKAAKYLEKRPYAPGEHGRSKRKQDSDYAVRLREKQRLRAQYG 65 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I E + + F+EA R++G T NL+ LE RLD +V R+ T ARQ V HRH++V Sbjct: 66 -IREAQLKIAFQEARRTQGLTGENLVEILEQRLDALVVRSGLARTTAQARQLVVHRHIMV 124 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATF 179 +G+ V+ S+R K G +I VK +S+ A+ DV P Y+ V D + A Sbjct: 125 DGKIVDRPSFRVKAGQMIHVKPRSEGTEPFQVAAAGGHADVLPKLPPYLEVELDKLQARL 184 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR+P + PV + LVVE+Y Sbjct: 185 VRLPKRAE---VPVTCEVQLVVEYY 206 >gi|157689568|gb|ABV65340.1| ribosomal protein S4 [Swietenia macrophylla] Length = 193 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I + K A + + ++P++++++ +I S Sbjct: 116 DIPSYRCKPRDIITARDDQKSRALIPNYLDSSHPEELPKHLTLHAFQYKGLVNQIIDSK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVGLKINELLVVEYYSR 191 >gi|18920757|gb|AAL82423.1| ribosomal protein system 4 [Myurella tenerrima] Length = 197 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKDQKKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|67035869|gb|AAY62861.1| small ribosomal protein subunit 4 [Mastopoma subfiliferum] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPEARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|119953396|ref|YP_945605.1| 30S ribosomal protein S4 [Borrelia turicatae 91E135] gi|254764571|sp|A1R043|RS4_BORT9 RecName: Full=30S ribosomal protein S4 gi|119862167|gb|AAX17935.1| SSU ribosomal protein S4P [Borrelia turicatae 91E135] Length = 208 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+++ +K K+ RR G N++ +PK + + PG+HG+ R++K + +G QL KQK+ Sbjct: 1 MNRKNIAKGKLVRRFGVNIFEQPKYDKLLKKKPNAPGMHGRSRRAKITEYGKQLIEKQKV 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ +IFKE+ R G T NL++ LE R+D +VYRA F + ARQ V+H Sbjct: 61 KFTYG-VSERQLTNIFKESRRQHGVTGDNLLALLERRIDNVVYRAGFAISRAHARQIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176 +++NGR V I S + D+I+VK+K + V + R +P +I VN D++ Sbjct: 120 GIIMLNGRRVTIPSITLRANDMIQVKEKDRLKKLVRSNIEKTSTLRKLPTWIEVNADDLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R PS + P + ++VE+YS+ Sbjct: 180 VKITRPPSRDE---IPTLANEQMIVEYYSK 206 >gi|157689554|gb|ABV65333.1| ribosomal protein S4 [Schinus terebinthifolius] Length = 194 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTRKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + A + + ++P++++++ +I S Sbjct: 116 VDIPSYRCKPRDIITARDDQNSRALIQNYLDSSHHEELPKHLTLHAVQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|3098154|gb|AAC15525.1| small ribosomal protein 4 [Scouleria aquatica] Length = 199 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---TNQSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYIRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A + + +++ VP +++ N +I Sbjct: 117 NDCIVNIPSYRCKPLDFITIKNRQKSQAIISKNINFSQKYKVPTHLTFNSLQKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LNRESIDLKINELLVVEYYSR 197 >gi|63100979|gb|AAY33114.1| small ribosomal protein 4 [Herzogiella adscendens] Length = 199 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VBI SYRCK D I +K + K + + + ++ P +++ + +I Sbjct: 117 NDCIVBIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKXPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|294155799|ref|YP_003560183.1| 30S ribosomal protein S4 [Mycoplasma crocodyli MP145] gi|291599886|gb|ADE19382.1| 30S ribosomal protein S4 [Mycoplasma crocodyli MP145] Length = 199 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K RR+G ++ K + R+Y PG HG +R K S +GL L KQK+ Sbjct: 1 MARYTGPVFKKSRRLGFSILETGKEFAKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKI 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K +G ISEK+ + + +A + +G T NL+ LESRLD +VYRA F T ARQ VNH Sbjct: 60 KYVFG-ISEKQLQKSYIKATKIKGITGTNLLQVLESRLDNLVYRAGFAQTRRQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H LV+G+ +I S K G I +K+KS++ + +A LA + +++ + Sbjct: 119 NHFLVDGKKADIPSMSIKIGSTITLKEKSQKNIQITDA--LANKAASPWLT--RKDFNFK 174 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + ++ L+VE+Y++ Sbjct: 175 FDRLPERNE---MHSEIKDALIVEYYAK 199 >gi|253581361|ref|ZP_04858587.1| ribosomal protein S4 [Fusobacterium varium ATCC 27725] gi|251836725|gb|EES65259.1| ribosomal protein S4 [Fusobacterium varium ATCC 27725] Length = 195 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANKKPTEYAIQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQVVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+ V + SK L + A + E VP ++ ++ + Sbjct: 115 VAVNGRRVNIASYRVKVGDVVSVIENSKNLDIIKTAVE--ESRVPAWLELDKAAFSGKVI 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|237736197|ref|ZP_04566678.1| SSU ribosomal protein S4P [Fusobacterium mortiferum ATCC 9817] gi|229421750|gb|EEO36797.1| SSU ribosomal protein S4P [Fusobacterium mortiferum ATCC 9817] Length = 195 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANKKPTEYAVQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDVI + + SK L + + + A VP ++ ++ + Sbjct: 115 VAVNGRRVNIASYRVKVGDVISIIENSKNLDIIKTSVEDA--TVPAWLELDRAAFSGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|67035939|gb|AAY62896.1| small ribosomal protein subunit 4 [Heterocladium dimorphum] Length = 199 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + +L ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|49182708|gb|AAT57816.1| small ribosomal protein [Goebeliella cornigera] Length = 197 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 7/200 (3%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P SY K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTNKTPKPKSSYI--DRSTSSNKKISQYRIRLEEKQKLRFHYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ VN + Sbjct: 58 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMTPTIPGARQLVNHRHISVNNAT 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + +R++P +++ + + + + Sbjct: 118 VDIPSYNCEPGDIIAIRNKEKSQSIITRNINAFQKREIPNHLTFDLTQLQGLVNQTINR- 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 --EFIDLKVNELLVVEYYSR 194 >gi|548872|sp|P36466|RR4_MELUN RecName: Full=30S ribosomal protein S4, chloroplastic gi|439956|emb|CAA82445.1| ribosomal protein S4 [Melica uniflora] Length = 196 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P + + H K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTPKSGSNPKKKFH----SGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVYIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|3914844|sp|O20106|RR4_CYPSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292831|emb|CAA92552.1| ribosomal protein S4 [Cypella sp. 'Lejeune 1997'] Length = 194 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHMAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSSHEELPNHLTIDPLQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|66866207|gb|AAY57777.1| small ribosomal protein 4 [Aulacomnium palustre] Length = 206 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 13/210 (6%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S + K S + ++L QK++ +Y Sbjct: 2 RYRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEENQKLRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+L Sbjct: 59 G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMV 176 VN V+I SYRCK D I +K + K A + + L ++ +P +++ + Sbjct: 118 VNDHIVDIPSYRCKPQDFITIKDRQKSEAIIXXXXXXKNIDLYQKYKIPNHLTYSSLEKK 177 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 178 GLVNQI---LDRESIGLKINELLVVEYYSR 204 >gi|108796850|ref|YP_636392.1| ribosomal protein S4 [Staurastrum punctulatum] gi|90101670|sp|Q32RY4|RR4_STAPU RecName: Full=30S ribosomal protein S4, chloroplastic gi|61393618|gb|AAX45759.1| ribosomal protein S4 [Staurastrum punctulatum] Length = 212 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 20/218 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ L G SP+ + ++ + ++ S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLNTPLPGLTSSPIVNST----VNTKSQRKDKSEYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + A R++G T L+ LE RLD I++R PTI AARQ VNH H Sbjct: 57 HYG-ITERQLLRYVRLARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE------------RDVPEYI 168 VLVN R V+I S+RCK + I ++ +++ A V + ++ VP ++ Sbjct: 116 VLVNERVVDIPSFRCKPQENISIRDRARSRALVDKNLNNSQESKKLSPSRDFLSKVPTHL 175 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +N N A+ ++ + V + LVVE+YSR Sbjct: 176 RINTKNYKASVNQVVNRN---SIGVKVNELLVVEYYSR 210 >gi|222103530|gb|ACM44294.1| small ribosomal protein subunit 4 [Plagiothecium platyphyllum] Length = 198 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|62288931|sp|P69637|RR4_CALEP RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288942|sp|P69648|RR4_PHLPR RecName: Full=30S ribosomal protein S4, chloroplastic gi|439928|emb|CAA82432.1| ribosomal protein S4 [Calamagrostis epigeios] gi|439960|emb|CAA82447.1| ribosomal protein S4 [Phleum pratense] Length = 196 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|222103426|gb|ACM44242.1| small ribosomal protein subunit 4 [Drepanocladus aduncus] Length = 203 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 6 RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 61 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 62 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 121 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 122 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 180 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 --LDRESIGLKINELLVVEYYSR 201 >gi|67035763|gb|AAY62812.1| small ribosomal protein subunit 4 [Codonoblepharon menziesii] Length = 202 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 4 YRGPRVKIVRRLGILPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 60 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 61 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 119 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + + +P +++ N +I Sbjct: 120 NHRIVDIASYRCKPQDFITIKNRQKSQDIIAKNIDFYPKYKIPNHLTYNSLEKKGLVNQI 179 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 ---LDRELIGLKINELLVVEYYSR 200 >gi|49182677|gb|AAT57801.1| small ribosomal protein [Bazzania sp. Davis 146] Length = 195 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ S+ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N Sbjct: 57 RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|3098212|gb|AAC15554.1| small ribosomal protein 4 [Aulacomnium turgidum] Length = 199 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGLRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + L ++ +P +++ + +I Sbjct: 117 NDHIVDIPSYRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|37548859|gb|AAO32698.1| ribosomal protein 4 [Pogonatum japonicum] Length = 195 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 CKIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 58 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 118 NIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIGLKINELLVVEYYSR 193 >gi|62288928|sp|P69634|RR4_ARUJA RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288943|sp|P69649|RR4_PHYFL RecName: Full=30S ribosomal protein S4, chloroplastic gi|439916|emb|CAA82428.1| ribosomal protein S4 [Pseudosasa japonica] gi|439958|emb|CAA82448.1| ribosomal protein S4 [Phyllostachys flexuosa] Length = 196 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + + + ++ +P++++++ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLIQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196 >gi|24473822|gb|AAL82754.1| small ribosomal subunit protein 4 [Brachymenium niveum] Length = 198 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNINLYQKYKTPNHLTYNFLKKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|67035775|gb|AAY62818.1| small ribosomal protein subunit 4 [Hylocomiastrum pyrenaicum] Length = 199 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K K K + + ++ +P++++ + +I Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNKRKSETIISKNIDFYQKYKIPDHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|118626109|emb|CAL41757.1| small ribosomal protein 4 [Anastrophyllum alpinum] Length = 191 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VELKINELLVVEYYSR 189 >gi|328541154|gb|AEB21801.1| ribosomal protein S4 [Lepidozia microphylla] Length = 198 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ SY K S + ++L KQK++ +YG + Sbjct: 1 GPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ D+I ++ + K + + + L + +P +++ + + + + + Sbjct: 117 NIVDIPSYNCEPRDIITIRDRQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|63100971|gb|AAY33110.1| small ribosomal protein 4 [Bryonorrisia acutifolia] Length = 198 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196 >gi|257470859|ref|ZP_05634949.1| 30S ribosomal protein S4 [Fusobacterium ulcerans ATCC 49185] gi|317065062|ref|ZP_07929547.1| SSU ribosomal protein S4P [Fusobacterium ulcerans ATCC 49185] gi|313690738|gb|EFS27573.1| SSU ribosomal protein S4P [Fusobacterium ulcerans ATCC 49185] Length = 195 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANKKPTEYAIQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQVVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDV+ V + SK L + A + + VP ++ ++ + Sbjct: 115 VAVNGRRVNIASYRVKVGDVVSVIENSKNLDIIKTAVE--DSRVPAWLELDKAAFSGKVI 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|46811010|gb|AAT01823.1| small ribosomal protein 4 [Haplomitrium mnioides] Length = 196 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 7/201 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G L G + +RS +K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGT-LPGLTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD +++R TI ARQ VNHRH+++N Sbjct: 57 TERQLLRYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMINY 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 ++V+ Y C+ D+I K + + + + +P ++ ++ V +I Sbjct: 117 KTVDAPGYNCEPRDIITTKNPMESRLGMAKGMDFIQSKIPNHLFLDSSKGVGLVNQIIDR 176 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---EWISLKINELLVVEYYSR 194 >gi|63100977|gb|AAY33113.1| small ribosomal protein 4 [Bryostreimannia turgida] Length = 198 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|195984190|gb|ACG63785.1| rps4 [Oedipodiella australis var. catalaunica] Length = 196 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+ S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE R D +++R TI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMALTIPEARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + +++ VP +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITIKDRQKSQAIITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|71894490|ref|YP_278598.1| 30S ribosomal protein S4 [Mycoplasma synoviae 53] gi|90101696|sp|Q4A5T4|RS4_MYCS5 RecName: Full=30S ribosomal protein S4 gi|71851278|gb|AAZ43887.1| 30S ribosomal protein S4 [Mycoplasma synoviae 53] Length = 199 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ K RR G ++ K S R+Y PG HG +R K S +GL L KQK+ Sbjct: 1 MSRYTGPLFKKSRRFGYSILETNKEFSKGRKRTYAPGQHGNKR-VKLSDYGLHLYEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K +G +SEK+ +K+A +S+ T L+ LESRLD +VYRA F T ARQ VNH Sbjct: 60 KLVFG-VSEKQLLKTYKKAVKSKEITGTVLLQLLESRLDNLVYRAGFATTRRQARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H ++G+ NI S + K G + +K+ S++L V EA ++ +++ + T Sbjct: 119 GHFTIDGKKANIPSMQIKTGTTVVLKETSRKLKLVQEALEMQPAS--AWVT--RKDFQFT 174 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + ++ LVVEFY++ Sbjct: 175 FYRVPERTE---MHKDIKEALVVEFYAK 199 >gi|118626125|emb|CAL41759.1| small ribosomal protein 4 [Mesoptychia sahlbergii] Length = 191 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I V+ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|3914861|sp|O20278|RR4_PILTE RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292984|emb|CAA92558.1| ribosomal protein S4 [Pillansia templemannii] Length = 195 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASYPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WIGLKINELLVVEYYSR 193 >gi|42556442|gb|AAS19816.1| small ribosomal protein 4 [Lepicolea ochroleuca] Length = 191 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---IDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQNLKIPSHLTFDSTKLCGSITQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ITLKINELLVVEYYSR 189 >gi|37992555|gb|AAR06456.1| small ribosomal protein 4 [Hookeria acutifolia] Length = 199 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIVRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+ V Sbjct: 58 -ITERQLLNYVRIARRAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K A + + + ++ P +++ + RI Sbjct: 117 NNCIVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|157689574|gb|ABV65343.1| ribosomal protein S4 [Thymelaea hirsuta] Length = 194 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RAGSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHLLVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I VK + K LA V + ++P++++++ +I Sbjct: 116 VDIPSYRCKPRDIISVKDEQKSLALVQNYLDSSTHEELPKHLTLHTLQYKGLVNQIIDRK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|49182692|gb|AAT57808.1| small ribosomal protein [Chiloscyphus appalachianus] Length = 195 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRXDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|62288935|sp|P69641|RR4_ELYCA RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288938|sp|P69644|RR4_HORMA RecName: Full=30S ribosomal protein S4, chloroplastic gi|7440155|pir||S41269 ribosomal protein S4, chloroplast - Hordeum murinum chloroplast (fragment) gi|439936|emb|CAA82437.1| ribosomal protein S4 [Elymus canadensis] gi|439944|emb|CAA82440.1| ribosomal protein S4 [Hordeum murinum] Length = 196 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|28194677|gb|AAO33600.1|AF480955_1 ribosomal protein S4 [Gymnostomiella monodii] Length = 196 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S+ + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 +NI SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 IINIPSYRCKPQDFITIKDRQKSQVLITKNIDFFQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|63101049|gb|AAY33149.1| small ribosomal protein 4 [Oedicladium doii] Length = 199 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SY+CK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 LDRK---SIDLKINELLVVEYYSR 197 >gi|328541108|gb|AEB21778.1| ribosomal protein S4 [Bazzania yoshinagana] Length = 195 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ S+ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N Sbjct: 57 RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|304438388|ref|ZP_07398329.1| 30S ribosomal protein S4 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368754|gb|EFM22438.1| 30S ribosomal protein S4 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 197 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 101/207 (48%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G +S +TR +R K S +GLQL+ KQK K Sbjct: 1 MAIDRVPVLKRCRALGLEPATLGRSRQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR +++A + G T NL+ LE R+D +V+R T ARQ V H H Sbjct: 55 IYGVL-ERQFRGYYEKAKKMSGVTGENLLCLLERRMDNVVFRLGLANTRRQARQLVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I S EGDVIEV +KS+ A E + + P +++ + N+ T Sbjct: 114 FTVNGKRVDIPSALVHEGDVIEVAEKSRSGAFFKELKESSNALSAPAWLTADQANLTGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + V + +VE YS+ Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197 >gi|46486576|gb|AAS98724.1| ribosomal protein subunit 4 [Hypnodendron spininervium] Length = 197 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K +SK + + ++ +P +++ + +I Sbjct: 117 HIVDIPSYRCKPQDFITIKDRSKSQTIISKNIDFYQKYKIPNHLTYSSLEKKGFVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|150389493|ref|YP_001319542.1| 30S ribosomal protein S4 [Alkaliphilus metalliredigens QYMF] gi|172052476|sp|A6TNW5|RS4C_ALKMQ RecName: Full=30S ribosomal protein S4 C gi|149949355|gb|ABR47883.1| RNA-binding S4 domain protein [Alkaliphilus metalliredigens QYMF] Length = 198 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 114/206 (55%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ G R K S +G+QL KQK++ Sbjct: 1 MAKMMEPRFKLSRRLGVNVYGHPKAM-----NRAGNGSYRGSKKLSNYGIQLLEKQKLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F+ +A +S G T LI LE RLD +VYR F +I ARQ VNH H Sbjct: 56 YYG-VMEKQFKLYVDKAMQSTGVTGEVLIQSLECRLDNMVYRMGFASSIREARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I SY K GD + +++KS+Q+ + E YI N + + V Sbjct: 115 LLVNGQKVDIPSYGLKLGDEVSLREKSQQVEKYISNFTHFEGQTLSYIDKNIEMLTTKLV 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 IPS + P+ + +LVVE+YSR Sbjct: 175 AIPSREE---IPIEVNDHLVVEYYSR 197 >gi|157689520|gb|ABV65316.1| ribosomal protein S4 [Melianthus comosus] Length = 193 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I + + K A + ++P+Y++++ +I S Sbjct: 116 DIPSYRCKPRDIITPRDEPKSRALIQNYLHSSTHEELPKYLTLHPFQYKGLVNQIIDSN- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVGLKINELLVVEYYSR 191 >gi|11121224|emb|CAC14788.1| ribosomal protein subunit 4 [Leucolepis menziesii] gi|63191708|gb|AAY34815.1| small ribosomal protein subunit 4 [Leucolepis acanthoneura] Length = 198 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 9/204 (4%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPR-RIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 56 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 57 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 115 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 116 NDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 175 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 ---LDRESIDLKINELLVVEYYSR 196 >gi|328541156|gb|AEB21802.1| ribosomal protein S4 [Lepidozia fauriana] Length = 195 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ SY K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSRSIITKNVNFFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|22091487|emb|CAC86576.1| small ribosomal protein S4 [Cyathophorella tonkinensis] Length = 197 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY+CK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 SIVDIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|158320966|ref|YP_001513473.1| 30S ribosomal protein S4 [Alkaliphilus oremlandii OhILAs] gi|172048008|sp|A8MI45|RS4B_ALKOO RecName: Full=30S ribosomal protein S4 B gi|158141165|gb|ABW19477.1| RNA-binding S4 domain protein [Alkaliphilus oremlandii OhILAs] Length = 197 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 10/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ R +G N++G PK+ G R K S +GLQL KQK++ Sbjct: 1 MAKMMEPRFKLSRSLGVNIYGHPKAMQRA-----GKTAGRASKKLSSYGLQLLEKQKLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F ++A ++ G + LI LE RLD +VYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFVIYVEKAMKASGLSGEALIQSLECRLDNMVYRMGFASSIREARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+ SY + D + ++++S+++ L + + +YI + + + Sbjct: 115 ILVNGKKVDRPSYPIQVDDAVALRERSQKIEKYLSNLKNTTINF-DYIETDVSSFTGRLL 173 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ + PV + LV+EFYS+ Sbjct: 174 RIPNREE---IPVEVNEQLVIEFYSK 196 >gi|3914867|sp|O36052|RR4_PATSQ RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292982|emb|CAA92557.1| ribosomal protein S4 [Patersonia sp. 'Lejeune 1997'] Length = 196 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 11/202 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGNDLKNQLRSVKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A + +G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKVKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D+I K K K A + + + ++P +++++ +I Sbjct: 116 VDIPSYRCKPQDIITTKDKQKSKALIQNYIASSTQPQEELPNHLTIDPFQYKGLVNQI-- 173 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 -RDSKWIGLKINELLVVEYYSR 194 >gi|46486580|gb|AAS98726.1| ribosomal protein subunit 4 [Pterobryella praenitens] Length = 200 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRARIIRRLGALPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + + +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K + K + + ++ +P +++ + + Sbjct: 117 VNDRIVDIPSYRCKLHDFITIKDRQKSQTIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|16565349|gb|AAL26194.1|AF313586_1 small ribosomal protein 4 [Selaginella deflexa] Length = 195 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ S+ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV++N Sbjct: 57 RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVVINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|49182663|gb|AAT57794.1| small ribosomal protein [Acromastigum exile] Length = 195 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ S+ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N Sbjct: 57 RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|67035773|gb|AAY62817.1| small ribosomal protein subunit 4 [Myurium hochstetteri] Length = 198 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|193216910|ref|YP_002000152.1| ribosomal protein S4 [Mycoplasma arthritidis 158L3-1] gi|226699091|sp|B3PN46|RS4_MYCA5 RecName: Full=30S ribosomal protein S4 gi|193002233|gb|ACF07448.1| ribosomal protein S4 [Mycoplasma arthritidis 158L3-1] Length = 200 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ S K RR G +L K + R+ PG HG R+ KPS + L L KQK+ Sbjct: 1 MSRFLGSIFKKSRRYGISLLENNKEFTKGKKRTTAPGQHGA-RRVKPSDYQLHLYEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ++E++F+ ++ A + +G T L+ +ESRLD +V+RA F T ARQFVNH Sbjct: 60 RYMYG-LNERQFKHLYSIASKKQGVTGVILLQMIESRLDNLVFRAGFARTRAQARQFVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H V+G NI S K G VIE+K + V +A + V +++ + T Sbjct: 119 GHFTVDGHKANIPSMVIKVGSVIEMKPSLQTSPQVKDAVEAM--TVSPWLT--KTDFKVT 174 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + + + L+VE+Y+R Sbjct: 175 FNRLPERKE---FAKDINEALIVEYYNR 199 >gi|49182736|gb|AAT57830.1| small ribosomal protein [Jungermannia crenuliformis] Length = 195 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGTLPGLTGKTLKPKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + + Sbjct: 117 VDIPSYSCQLGDIITVKNKQKSQSMITKNINLFQKLKIPSHLTFDSIELRGYVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|111283698|gb|ABH09199.1| small ribosomal protein 4 [Tylimanthus saccatus] Length = 191 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ Y + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTSKALKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 TEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C GD+I VK + K + +++ L ++ +P +++ + + + + Sbjct: 117 DIVDIPSYNCGPGDIITVKNERKSQSMIIKNINLFQKSKIPSHLTFDSTELRGFVNQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 177 R---EWIDLKINELLVVE 191 >gi|85001767|gb|ABC68421.1| small ribosomal protein 4 [Pyramidula tetragona] Length = 196 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGVLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A R++G T L+ LE RLD +V+R PTI ARQ VNHRHVLVN Sbjct: 57 ERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + +++ VP +++ + +I Sbjct: 117 IVDIPSYRCKPQDSITIKNRQKSQAIITKNIDFSQKYKVPNHLTFDSVQKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|67035805|gb|AAY62833.1| small ribosomal protein subunit 4 [Bryocrumia andersonii] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|260903836|ref|ZP_05912158.1| 30S ribosomal protein S4 [Brevibacterium linens BL2] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++L+ KQ+++ YG I E Sbjct: 2 TRVSRALGMPLTPKAEKYFERRPYPPGEHGRARRRNDSDYSVRLKEKQRLRAQYG-IREA 60 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + +KEA R G T ++ LE RLD +V R+ F TI ARQFV HRH+ V+G+ V Sbjct: 61 QMLKTYKEASRLSGLTGETMVELLEMRLDALVLRSGFARTIAQARQFVVHRHITVDGQRV 120 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + S+R KEG I+V ++S + A+ +D VP Y++VN + + T +R P Sbjct: 121 DRPSFRVKEGQTIQVHERSASMDPFQVAAAGGHKDVLPAVPGYLNVNLEGLQTTLLRRPK 180 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + LVVE YSR Sbjct: 181 REE---VPVTVDVQLVVEHYSR 199 >gi|167957551|ref|ZP_02544625.1| ribosomal protein S4 [candidate division TM7 single-cell isolate TM7c] Length = 205 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 7/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K RR G L + + +S PG H R+ KPS + QLR KQK+++ Sbjct: 1 MARDTSPIVKQSRREGYALHPKAHKIMVRKSGIPGEHAHGRQGKPSLYLTQLREKQKVRR 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F + KEA R +G NL+ LE RLD VYRA F + AARQ V+H H Sbjct: 61 TYG-LLEKQFSRLMKEATRKKGLAGENLLQLLERRLDNAVYRAGFASSRRAARQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ---LASVLEASQLAERDVPEYISVNHDNMVA 177 ++NGR V+I S R K GD I V+ KS + + + + + + ++ + + Sbjct: 120 FILNGRRVDIPSIRLKAGDEISVRPKSTKSGYFTHIDDIVKNSNQTALSWMKSDVKGLKF 179 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + P + L+VE+YSR Sbjct: 180 SITGNPKREEAEP---DINEQLIVEYYSR 205 >gi|146261591|gb|ABQ15105.1| ribosomal protein S4 [Sedum rubrotinctum] Length = 195 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLSMASTIPGARQLVNHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + + ++P++++++ +I S Sbjct: 116 IVDIPSYRCKPSDIITAKDDKKSRTLIQNSIDSTPHEELPKHLTLHVFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---GVGLKINELLVVEYYSR 193 >gi|67035809|gb|AAY62835.1| small ribosomal protein subunit 4 [Juratzkaeella sinensis] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ YYG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKFEAIISKNIDFYQKSKIPNHLTYSSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESTGLKINELLVVEYYSR 197 >gi|548868|sp|P36459|RR4_FESPR RecName: Full=30S ribosomal protein S4, chloroplastic gi|439942|emb|CAA82439.1| ribosomal protein S4 [Festuca pratensis] Length = 196 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKNKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQTLMASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|227496183|ref|ZP_03926489.1| ribosomal protein S4 [Actinomyces urogenitalis DSM 15434] gi|226834266|gb|EEH66649.1| ribosomal protein S4 [Actinomyces urogenitalis DSM 15434] Length = 207 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 8/196 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L + R YGPG HG+ R+ S + ++L+ KQ+++ YG I E + + +F Sbjct: 16 LGIPLTPKAVRYFEKRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 74 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +EA R +G T +L+ LE RLD +V RA F TI ARQ V HRH+LV+G+ V+ S+R Sbjct: 75 EEARREKGLTGESLVELLEMRLDALVLRAGFARTIAQARQDVVHRHILVDGKVVDRPSFR 134 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190 K G I+V+ +S+ + A+ RD VPEY++V + + AT VR P + Sbjct: 135 VKPGQTIQVRPRSQVMVPFQIAAAGTHRDVLPAVPEYLTVELEKLSATLVRRPKRDE--- 191 Query: 191 YPVIMQPNLVVEFYSR 206 PV +VVE+YSR Sbjct: 192 VPVTCDVQMVVEYYSR 207 >gi|67035925|gb|AAY62889.1| small ribosomal protein subunit 4 [Campylophyllum halleri] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDFIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|37960617|gb|AAP70678.1| small ribosomal protein 4 [Sphagnum teres] Length = 195 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFITIKDQQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|46486590|gb|AAS98731.1| ribosomal protein subunit 4 [Mniodendron fuscomucronatum] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G L K+ ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALLGLTNKTAQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNHVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ + +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|47606912|gb|AAT36376.1| ribosomal protein subunit 4 [Lopidium concinnum] Length = 200 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 7/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G KS + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 59 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 NG V+I SYRCK D I +K K K + + + + ++ + +++ + +I Sbjct: 118 NGYIVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198 >gi|118626023|emb|CAL39328.1| small ribosomal protein 4 [Tetralophozia setiformis] Length = 191 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|157689424|gb|ABV65268.1| ribosomal protein S4 [Bixa orellana] Length = 192 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 9/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTSKRP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRFHYG-LAERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D+I + + K A + + ++P++++++ +I Sbjct: 116 IPSYRCKPRDIICARDEKKSRALIQNYLDSSTPEELPKHLTLHTLQYKGLVNQIIDRK-- 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 -WVGLKINELLVVEYYSR 190 >gi|46486574|gb|AAS98723.1| ribosomal protein subunit 4 [Touwiodendron diversifolium] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYQIPNHLTYSSLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + + LVVE+YSR Sbjct: 177 ---LNNELIGLKINELLVVEYYSR 197 >gi|67036046|gb|AAY62949.1| small ribosomal protein subunit 4 [Homalothecium sericeum] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVSLQLXEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|295112126|emb|CBL28876.1| SSU ribosomal protein S4P [Synergistetes bacterium SGP1] Length = 198 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R + K+ R +G N+ G PK+ + P GQ+ S + LQL KQK+K Sbjct: 1 MATRREPRFKLSRHLGVNVCGHPKAMKRVDTKKPARGGQK----VSQYALQLMEKQKIKA 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG I E++F FK A +S T L+ LE RLD +VYR F +I ARQ V+H H Sbjct: 57 YYG-ILERQFARYFKIAKKSTEMTGVALLKNLECRLDNLVYRIGFARSIRQARQMVSHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L+NG V+I S K DVI +K+KS+ + Q Y+ + + A + Sbjct: 116 ILLNGVKVDIPSCNVKVNDVISLKEKSRTNETFQNNFQGLASFSVPYLEKDKNQFSAKLI 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P+ + L VE YS+ Sbjct: 176 REPMREE---LPIEVNEILAVELYSK 198 >gi|222103494|gb|ACM44276.1| small ribosomal protein subunit 4 [Entodon flavescens] Length = 203 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSENIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|80974156|gb|ABB53771.1| small ribosomal subunit protein 4 [Garovaglia subelegans] Length = 200 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SYRCK D I VK + + + ++ +P +++ + Sbjct: 117 VNDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNK 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|12642210|gb|AAK00187.1| rps4 [Timmia austriaca] Length = 195 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|27227935|gb|AAN85765.1| ribosomal protein subunit 4 [Anomobryum prostratum] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKIPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKNRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|262066971|ref|ZP_06026583.1| ribosomal protein S4 [Fusobacterium periodonticum ATCC 33693] gi|291379319|gb|EFE86837.1| ribosomal protein S4 [Fusobacterium periodonticum ATCC 33693] Length = 195 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + R P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYAIQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI S+R K GDV+ V + SK + + A + A P ++ ++ + Sbjct: 115 IAVNGRRVNIASFRVKVGDVVSVIENSKNVELIKLAVEDA--TAPAWLELDKAAFSGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|67036050|gb|AAY62951.1| small ribosomal protein subunit 4 [Oxyrrhynchium rugosipes] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITMKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVTQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|150008959|ref|YP_001303702.1| 30S ribosomal protein S4 [Parabacteroides distasonis ATCC 8503] gi|149937383|gb|ABR44080.1| 30S ribosomal protein S4 [Parabacteroides distasonis ATCC 8503] Length = 172 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 71/163 (43%), Positives = 101/163 (61%), Gaps = 2/163 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + +I R+ GE ++G K ++ ++Y PG HG RK K S +G+QLR KQK K Sbjct: 1 MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR++F++A RS+G T L+ LE RLD +VYR PT AARQ V+HRH Sbjct: 60 TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVYRLGIAPTRAAARQLVSHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 + V+G VNI SY K G VI V++KSK + + +A Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHS 161 >gi|17025812|gb|AAL32073.1| ribosomal protein 4 [Syrrhopodon armatus] Length = 198 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGILSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 +NI SY+CK D I +K + K +++ + + +P +++ N +I Sbjct: 117 NHIINIPSYQCKPQDFITIKDQQKHQTMIVKNINFSPKHKIPNHLTFNSVEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQEAIGLKINELLVVEYYSR 196 >gi|171743071|ref|ZP_02918878.1| hypothetical protein BIFDEN_02197 [Bifidobacterium dentium ATCC 27678] gi|171278685|gb|EDT46346.1| hypothetical protein BIFDEN_02197 [Bifidobacterium dentium ATCC 27678] Length = 208 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T + +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGRTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + PV + VVEFY+R Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208 >gi|49182778|gb|AAT57851.1| small ribosomal protein [Plagiochila austinii] Length = 195 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMYIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY C+ GD+I + K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VNIPSYNCEPGDIITIGNKQKSRSIVTKNISSFQKLKIPSHLTFDSTQLQGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|3914862|sp|O20280|RR4_ROMRE RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292992|emb|CAA92559.1| ribosomal protein S4 [Romulea revelieri] Length = 195 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R T ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTNPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K K A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQKSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WIGLKINELLVVEYYSR 193 >gi|67036042|gb|AAY62947.1| small ribosomal protein subunit 4 [Okamuraea hakoniensis] Length = 199 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|37548831|gb|AAO32684.1| ribosomal protein 4 [Alophosia azorica] Length = 192 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGALPGLTSKTPXSKSSY---IDRSXSNKKXSQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A ++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I Sbjct: 57 LKYVRIARGAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHIXINDGIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY C+ GD I +K + K A + + L ++ +P +++ + + + Sbjct: 117 PSYXCQPGDFITIKNRQKSQAIITKNIBLFQKFKIPXHLTFDSSEXXGXVNQTINR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 WIDLKINELLVVEYYSR 190 >gi|157689436|gb|ABV65274.1| ribosomal protein S4 [Capparis flexuosa] Length = 193 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I VK + K V A +++P++++++ +I Sbjct: 116 DIPSYRCKPQDIITVKDEQKSRTLVQNLLDSSAHQELPKHLTLHTFQYEGLVNQIIDRK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --CVGLKINELLVVEYYSR 191 >gi|3098192|gb|AAC15544.1| small ribosomal protein 4 [Bartramia stricta] Length = 199 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGLRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 NDHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|11121109|emb|CAC14741.1| ribosomal protein subunit 4 [Bryum billardierei] Length = 199 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALTGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67036016|gb|AAY62934.1| small ribosomal protein subunit 4 [Rhynchostegium riparioides] Length = 199 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ +NHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLINHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIIGKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|189095326|ref|YP_001936339.1| 30S ribosomal protein S4 [Heterosigma akashiwo] gi|157694669|gb|ABV65945.1| 30S ribosomal protein S4 [Heterosigma akashiwo] gi|157777900|gb|ABV70086.1| 30S ribosomal protein S4 [Heterosigma akashiwo] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 MS+ + KI RR+G L G ++ + R PG HG+ K K + L+L KQK+K Sbjct: 1 MSRYRGPRVKILRRLG-PLSGLTQNGESIRKRSPGQHGKIIGKQKIGPYNLRLLEKQKLK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++EK+ + K+A R +G T L+ LE RLDT+ +R + +I A+RQ VNH Sbjct: 60 YNYG-VTEKQLLNYVKKARRIKGATGLQLLQMLEMRLDTVAFRLGWGNSIPASRQLVNHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LVN R VNI S+ CK GD + +K+K ++ A+ P+++ ++ + Sbjct: 119 HILVNDRKVNIPSFICKPGDKLTLKEKIATNKQIISANSTY----PKFLELDKSKINGIV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I S + + + L+VE+YSR Sbjct: 175 KEIVSR---EDFTISVDELLIVEYYSR 198 >gi|28194853|gb|AAO33688.1|AF481043_1 ribosomal protein S4 [Tortella flavovirens] Length = 196 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S L+ ++ S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSSINQLNSNKK---ISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|24473824|gb|AAL82755.1| small ribosomal subunit protein 4 [Brachymenium angolense] Length = 198 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|63100999|gb|AAY33124.1| small ribosomal protein 4 [Tomentypnum falcifolium] Length = 198 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|92417457|gb|ABE76824.1| ribosomal protein subunit 4 [Pottia truncata] Length = 200 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P S + K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R VNI SYRCK D I + ++ K + + ++ +P +++ N + Sbjct: 117 VNNRIVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDQESIGLKINELLVVEYYSR 198 >gi|29422393|gb|AAO84592.1| small ribosomal protein 4 [Breutelia affinis] Length = 197 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K P S ++ K + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKXPQLKSSS---INQSTSNKKIXQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 RIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLXINELLVVEYYSR 195 >gi|83314082|gb|ABC02210.1| small ribosomal subunit protein 4 [Garovaglia powellii] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + LE RLD I++R PTI ARQ VNHRH+ V Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIFV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK DVI VK + + + ++ +P +++ +I Sbjct: 117 NDCIVNIPSYRCKPQDVIIVKNEKNSEGVINKNEDFHQKYKIPNHLTYIFLEKKGLVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035990|gb|AAY62921.1| small ribosomal protein subunit 4 [Dicladiella cubensis] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 2 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 57 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 58 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 117 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 118 DCMVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 --LDRESIGLKINELLVVEYYSR 197 >gi|24473820|gb|AAL82753.1| small ribosomal subunit protein 4 [Brachymenium globosum] gi|63191695|gb|AAY34809.1| small ribosomal protein subunit 4 [Osculatia columbica] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPCVRIIRRLGALPGLTSKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A + +G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNINLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|323359962|ref|YP_004226358.1| ribosomal protein S4 [Microbacterium testaceum StLB037] gi|323276333|dbj|BAJ76478.1| ribosomal protein S4 [Microbacterium testaceum StLB037] Length = 209 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 108/201 (53%), Gaps = 8/201 (3%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K ++ R +G L + + R Y PG HG+ ++ S + ++LR KQ++++ YG I E Sbjct: 10 KVRLSRALGVALTPKAARYLEKRPYAPGEHGRTKRKADSDYAVRLREKQRLREQYG-IRE 68 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ R F EA R+ G T NL+ LE RLD +V R+ F T ARQ V HRH+LV+G+ Sbjct: 69 KQLRIAFNEARRTDGLTGENLVELLEMRLDALVVRSGFARTTAQARQLVVHRHILVDGQL 128 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIP 183 V+ S+R K G I VK KS+ L A+ + VP Y+ V+ + A VR P Sbjct: 129 VDRPSFRVKPGQQIHVKPKSEGLEPFQVAAAGGHAEVLPPVPGYLEVDLSTLQAKLVRRP 188 Query: 184 SSLKDVPYPVIMQPNLVVEFY 204 + PV LVVE+Y Sbjct: 189 KRAE---VPVTCDVQLVVEYY 206 >gi|47606922|gb|AAT36381.1| ribosomal protein subunit 4 [Ptychomnion aciculare] Length = 200 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SYRCK D I +K + + + ++ +P +++ + + Sbjct: 117 VNDSIVNIPSYRCKPQDFIIIKDEKNYEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNK 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198 >gi|27227945|gb|AAN85770.1| ribosomal protein subunit 4 [Bryum coronatum] Length = 198 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ V+HRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIINKNLNLYQKYKTPNHLTYNFLKKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|42556506|gb|AAS19848.1| small ribosomal protein 4 [Temnoma pilosum] gi|118626067|emb|CAL41753.1| small ribosomal protein 4 [Pseudolepicolea quadrilaciniata] Length = 191 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNH H+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINNYIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GDVI V+ K K + + + L ++ +P +++++ + + + + Sbjct: 117 SYNCKPGDVITVRNKQKSQSIITKNINLFQKLKIPNHLTLDSTQLRGSINQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLQINELLVVEYYSR 189 >gi|67036052|gb|AAY62952.1| small ribosomal protein subunit 4 [Squamidium brasiliense] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D + +K + K + + + ++ +P +++ +I Sbjct: 117 NDCIVDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|6002037|emb|CAA58926.1| ribosomal protein S4 [Coix lacryma-jobi] Length = 196 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN R V+I S+RCK D+I K + V ++ +P++++V+ Sbjct: 116 ILVNDRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196 >gi|63191811|gb|AAY34865.1| small ribosomal protein subunit 4 [Bellibarbula recurva] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLSNKIPDLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I + + K V + +++ +P +++ N ++ Sbjct: 117 NNRIVNIPSYRCKPQDFITINDRKKSQVMVTKNVDFSQKSKIPNHLTFNSLEKKGLINQV 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|6002021|emb|CAA58917.1| ribosomal protein S4 [Elymus repens] Length = 196 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNPKKKFNSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|47606928|gb|AAT36384.1| ribosomal protein subunit 4 [Pyrrhobryum latifolium] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197 >gi|62287263|sp|Q6H9K2|RR4_EQUVA RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927219|emb|CAE47545.1| small ribosomal protein 4 [Equisetum variegatum] Length = 207 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+ +NL G V ++ Q + K S +G++L AKQ+++ Sbjct: 1 MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R FVPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V++ S+ CK D+I + + + + + A+ VPE++++ Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGSPKTYQSILTKRIESFAKDQVPEHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|306450772|gb|ADM88645.1| small ribosomal protein 4 [Parisia laevipila] Length = 197 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I VK + K A +++ +++ VP +++ +I Sbjct: 117 RIVNIPSYRCKPQDFITVKNRQKSQAMIIKNIDFSQKYKVPNHLTFGSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|269795072|ref|YP_003314527.1| 30S ribosomal protein S4P [Sanguibacter keddieii DSM 10542] gi|269097257|gb|ACZ21693.1| SSU ribosomal protein S4P [Sanguibacter keddieii DSM 10542] Length = 205 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + ++ R +G L + R Y PG HG+ R+ S + ++LR KQ+++ Sbjct: 1 MTRSRR-QVRLSRALGIALTPKAVKHFEKRPYPPGEHGRARRRTESDYAVRLREKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+ F+EA ++ G T L+ LE RLD +V RA F T ARQ V HRH Sbjct: 60 QYG-LREKQMARAFEEARKAPGLTGEALVELLEVRLDALVLRAGFARTTLQARQAVVHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176 +LV+G+ V+ S++ K G ++VK KS+ + A+ A RD VP Y++V+ + + Sbjct: 119 ILVDGKIVDRPSFKVKPGQTVQVKPKSQSMTPFQVAAAGAHRDVLPAVPGYLTVSLEKLS 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + PV + LVVE YSR Sbjct: 179 FVLSRSPKRAE---VPVTCEVQLVVEHYSR 205 >gi|222103486|gb|ACM44272.1| small ribosomal protein subunit 4 [Anomodon minor] Length = 197 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|62288936|sp|P69642|RR4_FESGI RecName: Full=30S ribosomal protein S4, chloroplastic gi|439940|emb|CAA82438.1| ribosomal protein S4 [Festuca gigantea] gi|439950|emb|CAA82442.1| ribosomal protein S4 [Lolium perenne] Length = 196 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNGR VNI S+RCK D+I K + V ++ +P++++++ Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQTLMASSDPGKLPKHLTIDTLEYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196 >gi|63191857|gb|AAY34888.1| small ribosomal protein subunit 4 [Streptocalypta tortelloides] Length = 198 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 RGPRLRIIRRLGILPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSFEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|46486588|gb|AAS98730.1| ribosomal protein subunit 4 [Dendro-hypnum auricomum] Length = 199 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G L K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNHVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ + +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLERKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|11228615|gb|AAG33093.1| small ribosomal protein 4 [Arctoa fulvella] Length = 191 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K K A +++ +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKNCQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67035652|gb|AAY62757.1| small ribosomal protein subunit 4 [Hypnodontopsis spathulatus] Length = 202 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ ++ K S + ++L KQK++ +YG I+E+ Sbjct: 9 CRIIRRLGTLPGLTNKTSQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 64 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 65 QLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGLAPTIPGARQLVNHRHILVNDCIV 124 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K +++ +++ VP +++ N +I L Sbjct: 125 NIPSYRCKPQDSITIKDRQKSQTMIIKNLDFSQKTKVPNHLTFNFLEKKGLVNQI---LD 181 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 182 QESIGLKINELLVVEYYSR 200 >gi|63191851|gb|AAY34885.1| small ribosomal protein subunit 4 [Tuerckheimia valeriana] Length = 199 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVYFSQKYKIPNHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|37548881|gb|AAO32709.1| ribosomal protein 4 [Polytrichum brachymitrium] Length = 194 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CKIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 57 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|320534363|ref|ZP_08034849.1| ribosomal protein S4 [Actinomyces sp. oral taxon 171 str. F0337] gi|320133405|gb|EFW25867.1| ribosomal protein S4 [Actinomyces sp. oral taxon 171 str. F0337] Length = 210 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L + R YGPG HG+ R+ S + ++L+ KQ+++ YG I E + + +F Sbjct: 19 LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 77 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +EA R +G T +L+ LE RLD +V R+ TI ARQ V HRH+LV+G+ V+ SYR Sbjct: 78 EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 137 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190 K G I+V+ +S+ + A+ A RD VPEY++V+ + + AT VR P + Sbjct: 138 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPEYLNVDLEKLSATLVRRPKRDE--- 194 Query: 191 YPVIMQPNLVVEFYSR 206 PV +VVE+YSR Sbjct: 195 VPVTCDVQMVVEYYSR 210 >gi|49182706|gb|AAT57815.1| small ribosomal protein [Gackstroemia weindorferi] Length = 195 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKILKLKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ TI ARQ VNHRH+ +N + Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMASTIPGARQLVNHRHISINNET 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186 VNI SY C+ GD+I ++ K + + + ++P +++ + + + +I Sbjct: 117 VNIPSYNCEPGDIITIRNSEKSQSIITTNMNSFYKSEIPNHLTFDSTQLRGSINKIIHR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVDLKVNELLVVEYYSR 193 >gi|37960583|gb|AAP70661.1| small ribosomal protein 4 [Sphagnum cuspidatum] Length = 195 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDDSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|18568422|gb|AAL76080.1| ribosomal protein system 4 [Hypnum cupressiforme] Length = 198 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L+N Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|157689412|gb|ABV65262.1| ribosomal protein S4 [Anisoptera marginata] Length = 191 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 12/200 (6%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P ++ Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRPKAGKN-------QSRPGKKSQYRIRLEEKQKLRFHYG-LTE 52 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 53 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRI 112 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + K A + A ++P++++++ +I Sbjct: 113 VDIPSYRCKPRDIISARDGQKSRALIQNYLDSAIPEELPKHLTLHTLQYKGLVNQIIDRK 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 ---WVGLKINELLVVEYYSR 189 >gi|328541084|gb|AEB21766.1| ribosomal protein S4 [Telaranea herzogii] Length = 197 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G K+ SY K S + ++L KQK++ YYG + Sbjct: 1 GPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKISQYRIRLEEKQKLRFYYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD + TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILCLGMARTIPGARQLVNHRHIPIND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I ++ K K + + + L + +P +++++ + + Sbjct: 117 NIVDIPSYNCEPGDIITIRDKQKSQSVITKNMNLFQNLKIPNHLTLDSIKSCGFVNQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWINLKINELLVVEYYSR 195 >gi|67035807|gb|AAY62834.1| small ribosomal protein subunit 4 [Eulacophyllum cultelliforme] Length = 199 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P ++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|306835269|ref|ZP_07468301.1| 30S ribosomal protein S4 [Corynebacterium accolens ATCC 49726] gi|304568862|gb|EFM44395.1| 30S ribosomal protein S4 [Corynebacterium accolens ATCC 49726] Length = 178 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 103/182 (56%), Gaps = 6/182 (3%) Query: 26 PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 R Y PG G+ R + Y LQL+ KQK K YG + E++FR + EA+R G T Sbjct: 2 AFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKYTYGVL-ERQFRRYYTEANRLPGKTG 59 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 NL+ LE+RLD +VYRA T ARQ V+H H VNG+++NI SYR + D+I+V+ Sbjct: 60 DNLVILLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKNINIPSYRVTQYDIIDVRP 119 Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +S+++ +A L + +VP ++ V D + ++P + + +Q L+VE Y Sbjct: 120 RSQKMEWFEDAQDALIDANVPAWLQVVPDTLRILVHQLPERAQ---IDIPLQEQLIVELY 176 Query: 205 SR 206 S+ Sbjct: 177 SK 178 >gi|37548861|gb|AAO32699.1| ribosomal protein 4 [Pogonatum microstomum] Length = 195 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 CKIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 58 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHKHILVNDRIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 118 NIPSYRCKPQDFITIKNRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIGLKINELLVVEYYSR 193 >gi|67036114|gb|AAY62983.1| small ribosomal protein subunit 4 [Caribaeohypnum polypterum] Length = 199 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|328541158|gb|AEB21803.1| ribosomal protein S4 [Lepidozia sp. 2 Shaw 5789] Length = 195 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ SY K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|67035582|gb|AAY62722.1| small ribosomal protein subunit 4 [Oreas martiana] Length = 194 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGKVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + K A +++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITVKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|63191732|gb|AAY34826.1| small ribosomal protein subunit 4 [Braunia secunda] Length = 198 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 9/204 (4%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRI-RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 56 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 57 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 115 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 116 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKSKIPNHLTYNSLKKKGLVNQI 175 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 ---LDRELIGLKINELLVVEYYSR 196 >gi|227502698|ref|ZP_03932747.1| ribosomal protein S4 [Corynebacterium accolens ATCC 49725] gi|227076428|gb|EEI14391.1| ribosomal protein S4 [Corynebacterium accolens ATCC 49725] Length = 178 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 103/182 (56%), Gaps = 6/182 (3%) Query: 26 PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 R Y PG G+ R + Y LQL+ KQK K YG + E++FR + EA+R G T Sbjct: 2 AFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKYTYGVL-ERQFRRYYTEANRLPGKTG 59 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 NL+ LE+RLD +VYRA T ARQ V+H H VNG+++NI SYR + D+I+V+ Sbjct: 60 DNLVILLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKNINIPSYRITQYDIIDVRP 119 Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +S+++ +A L + +VP ++ V D + ++P + + +Q L+VE Y Sbjct: 120 RSQKMEWFEDAQDALIDANVPAWLQVVPDTLRILVHQLPERAQ---IDIPLQEQLIVELY 176 Query: 205 SR 206 S+ Sbjct: 177 SK 178 >gi|89147820|gb|ABD62758.1| ribosomal protein 4 [Metzgeria pubescens] Length = 199 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+ SY + K S + ++L KQK++ +YG Sbjct: 1 YRGPRTKIIRRLGALPGLTSKTFKLKSSY---IDRSAPNKKISQYRVRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ + Sbjct: 58 -LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRI 182 N V+I SY C+ GD+I +K + + + ++E ++ +P ++ + + + R+ Sbjct: 117 NKDIVDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRM 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197 >gi|46811060|gb|AAT01848.1| small ribosomal protein 4 [Treubia lacunosoides] Length = 197 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + Y ++ K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGILPGLTNKTLKSKLGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVGIARKAKGSTGEVLLQLLEMRLDNIIFRLGLAFTIPGARQLVNHRHILINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184 ++V+I SY CK D+I +K K + + + + +P +++ + + +I Sbjct: 117 KTVDIPSYHCKPKDLITIKNKPTSQLLITKNIDYSTKSQIPNHLTFDSVKKIGLVNQIID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EFINLKINELLVVEYYSR 195 >gi|329946640|ref|ZP_08294052.1| ribosomal protein S4 [Actinomyces sp. oral taxon 170 str. F0386] gi|328526451|gb|EGF53464.1| ribosomal protein S4 [Actinomyces sp. oral taxon 170 str. F0386] Length = 207 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 8/196 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L + R YGPG HG+ R+ S + ++L+ KQ+++ YG I E + + +F Sbjct: 16 LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 74 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +EA R +G T +L+ LE RLD +V R+ TI ARQ V HRH+LV+G+ V+ SYR Sbjct: 75 EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 134 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190 K G I+V+ +S+ + A+ A RD VP+Y++V+ + + AT VR P + Sbjct: 135 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPDYLNVDLEKLSATLVRRPKRDE--- 191 Query: 191 YPVIMQPNLVVEFYSR 206 PV +VVE+YSR Sbjct: 192 VPVTCDVQMVVEYYSR 207 >gi|118411052|ref|YP_874447.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum] gi|125987752|sp|A0T0H2|RR4_PHATC RecName: Full=30S ribosomal protein S4, chloroplastic gi|116739799|gb|ABK20670.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum] Length = 203 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59 MS+ K KI RR+G K + PG G K + +G++L KQK+K Sbjct: 1 MSRYRGPKLKISRRLGTLPGLTTKKS--NKLNRPGKDGNTDIGKKLTEYGVRLEEKQKLK 58 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++EK+ KEA R +G T L+ LE RLDT+ + F ++ ARQ VNH Sbjct: 59 FNYG-LTEKQLFRYVKEARRRQGVTGLILLQLLEMRLDTLCFTLGFAKSLAQARQLVNHG 117 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178 H+ +N + V+I S++C+ D+I +K+KS V + + R++P ++ + + A Sbjct: 118 HITINKKVVSIPSFQCRLNDIISIKEKSSSKTLVETNIKNNQVREIPTHLRFDTVKLEAI 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LV+E YSR Sbjct: 178 VLDYCDRND---VSLQLDELLVIEHYSR 202 >gi|24473836|gb|AAL82762.1| small ribosomal subunit protein 4 [Bryum cellulare] Length = 199 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGVLPGLTNKIPQLKTNL---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|326773291|ref|ZP_08232574.1| ribosomal protein S4 [Actinomyces viscosus C505] gi|326636521|gb|EGE37424.1| ribosomal protein S4 [Actinomyces viscosus C505] Length = 210 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L + R YGPG HG+ R+ S + ++L+ KQ+++ YG I E + + +F Sbjct: 19 LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 77 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +EA R +G T +L+ LE RLD +V R+ TI ARQ V HRH+LV+G+ V+ SYR Sbjct: 78 EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 137 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190 K G I+V+ +S+ + A+ A RD VPEY++V+ + + AT VR P + Sbjct: 138 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPEYLNVDLEKLSATLVRRPKRDE--- 194 Query: 191 YPVIMQPNLVVEFYSR 206 PV +VVE+YSR Sbjct: 195 VPVTCDVQMVVEYYSR 210 >gi|157689550|gb|ABV65331.1| ribosomal protein S4 [Reseda lutea] Length = 195 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P R L Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTSKRPRAGR----DLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSLTIPQARQLVNHRHILVNGR 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I VK + K + A ++P++++++ +I Sbjct: 116 IVDIPSYRCKPRDIITVKNEQKSRTLIQNFLDSSAAEELPKHLTLHTFQYEGLVNQIIDR 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---CIGLKINELLVVEYYSR 193 >gi|67035821|gb|AAY62841.1| small ribosomal protein subunit 4 [Isocladiella surcularis] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I ++ + K + + + ++ +P +++ + +I Sbjct: 117 DCMVDIPSYRCKPQDFITIRNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|157689518|gb|ABV65315.1| ribosomal protein S4 [Manihot esculenta] Length = 193 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-VTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I + + K A + + + ++P++++++ +I S Sbjct: 116 DIPSYRCKPRDIITARDEQKSRAMIQNDLDSSPQEELPKHLTLHPFQYKGLVNQIIDSK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVGLKINELLVVEYYSR 191 >gi|308189877|ref|YP_003922808.1| 30S ribosomal protein S4 [Mycoplasma fermentans JER] gi|307624619|gb|ADN68924.1| 30S ribosomal protein S4 [Mycoplasma fermentans JER] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 + K RR G ++ K S R+Y PG HG +R K S +GL L KQK+K Sbjct: 2 RYRGPVFKKSRRYGFSILETGKEFSKGRKRTYAPGQHGDKR-VKLSDYGLHLYEKQKVKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ + A + +G T L+ LESRLD +VYRA F T ARQ V+H H Sbjct: 61 LYG-LNEKQMHKYYIRATKIKGVTGTVLLQLLESRLDNLVYRAGFASTRRQARQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +NG +I S + G I++K+KS++ + L +R +++++ ++ Sbjct: 120 FTLNGHKADIPSMNVEVGSKIQLKEKSQKNKIIEAN--LKDRSAAKWLTI--KGFEVSYD 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P ++ N +VEFYS+ Sbjct: 176 RLPDRSELHP---EIKENFIVEFYSK 198 >gi|257453243|ref|ZP_05618542.1| 30S ribosomal protein S4 [Fusobacterium sp. 3_1_5R] gi|257467162|ref|ZP_05631473.1| 30S ribosomal protein S4 [Fusobacterium gonidiaformans ATCC 25563] gi|315918293|ref|ZP_07914533.1| SSU ribosomal protein S4P [Fusobacterium gonidiaformans ATCC 25563] gi|317059777|ref|ZP_07924262.1| SSU ribosomal protein S4P [Fusobacterium sp. 3_1_5R] gi|313685453|gb|EFS22288.1| SSU ribosomal protein S4P [Fusobacterium sp. 3_1_5R] gi|313692168|gb|EFS29003.1| SSU ribosomal protein S4P [Fusobacterium gonidiaformans ATCC 25563] Length = 195 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + RS P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRNLGIDPVILGVNKSSNRSLRP-----NANRKPTEYAIQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR ++ EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKLYDEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI SYR K GDVI V + SK L + A A + P ++ ++ + Sbjct: 115 ITVNGRRVNIASYRVKVGDVIAVVENSKNLEIIKSAVDTA--NAPAWLQLDKAAFAGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|63145908|gb|AAY33892.1| small ribosomal protein 4 [Jensenia spinosa] Length = 199 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G L G + +RS K S + ++L KQK++ +YG + Sbjct: 3 GPRAKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-L 58 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH+L+N Sbjct: 59 TERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILIND 118 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184 VNI SY CK DVI +K + + + + + L E+ +P +++ + + +I Sbjct: 119 DIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVNQIID 178 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 R---EWISLKINELLVVEYYSR 197 >gi|46811038|gb|AAT01837.1| small ribosomal protein 4 [Petalophyllum ralfsii] Length = 197 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G + SY ++ K S + ++L KQK++ +YG + Sbjct: 1 GPRAKVIRRLGALPGLTDGILASKFSY---INRSASSKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ LE RLD I++R PTI ARQ VNH H+ ++G Sbjct: 57 TERQLLRYVRIAREAKGSTGRVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIAIDG 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +V+I SY K GDVI +K + + + + +++ +P +++++ + ++ Sbjct: 117 NTVDIPSYNRKPGDVITIKNRRESQSIITRNMSSSQKPKIPNHLTLDSAQFRGSVDQVID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RD---WMNLKINELLVVEYYSR 195 >gi|63191714|gb|AAY34817.1| small ribosomal protein subunit 4 [Pohlia nutans] Length = 196 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRFARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 LVDIPSYRCKPQDFITIKDQQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIDLKINELLVVEYYSR 194 >gi|23334986|ref|ZP_00120224.1| COG0522: Ribosomal protein S4 and related proteins [Bifidobacterium longum DJO10A] gi|23465460|ref|NP_696063.1| 30S ribosomal protein S4 [Bifidobacterium longum NCC2705] gi|189439486|ref|YP_001954567.1| 30S ribosomal protein S4 [Bifidobacterium longum DJO10A] gi|213692483|ref|YP_002323069.1| RNA-binding S4 domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227545937|ref|ZP_03975986.1| ribosomal protein S4 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622015|ref|ZP_04665046.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296454013|ref|YP_003661156.1| RNA-binding S4 domain-containing protein [Bifidobacterium longum subsp. longum JDM301] gi|312132891|ref|YP_004000230.1| rpsd [Bifidobacterium longum subsp. longum BBMN68] gi|317482221|ref|ZP_07941243.1| ribosomal protein S4 [Bifidobacterium sp. 12_1_47BFAA] gi|322688955|ref|YP_004208689.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis 157F] gi|322690924|ref|YP_004220494.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. longum JCM 1217] gi|26399353|sp|P59127|RS4_BIFLO RecName: Full=30S ribosomal protein S4 gi|226697806|sp|B3DSF0|RS4_BIFLD RecName: Full=30S ribosomal protein S4 gi|254764570|sp|B7GSB1|RS4_BIFLI RecName: Full=30S ribosomal protein S4 gi|23326113|gb|AAN24699.1| 30S ribosomal protein S4 [Bifidobacterium longum NCC2705] gi|189427921|gb|ACD98069.1| Ribosomal protein S4 [Bifidobacterium longum DJO10A] gi|213523944|gb|ACJ52691.1| RNA-binding S4 domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227213571|gb|EEI81420.1| ribosomal protein S4 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515206|gb|EEQ55073.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517007|emb|CBK70623.1| SSU ribosomal protein S4P [Bifidobacterium longum subsp. longum F8] gi|296183444|gb|ADH00326.1| RNA-binding S4 domain protein [Bifidobacterium longum subsp. longum JDM301] gi|311773864|gb|ADQ03352.1| RpsD [Bifidobacterium longum subsp. longum BBMN68] gi|316916359|gb|EFV37759.1| ribosomal protein S4 [Bifidobacterium sp. 12_1_47BFAA] gi|320455780|dbj|BAJ66402.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. longum JCM 1217] gi|320458628|dbj|BAJ69249.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320460291|dbj|BAJ70911.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis 157F] Length = 208 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + +++R KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRDRRRTESDYAVRMREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++A R+ G T + +++ LE+RLD +V RA F T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKATRTAGQTGNAMLTDLETRLDNLVLRAGFARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLPSLKATVTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + VVEFY+R Sbjct: 190 VEE---IPVQVNIQYVVEFYAR 208 >gi|83416500|gb|ABC18270.1| small ribosomal subunit protein 4 [Dicranum scoparium] Length = 196 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I ++ + K A +++ +++ +P +++ + +I Sbjct: 117 IVNIPSYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|307828394|gb|ADN94995.1| small ribosomal protein 4 [Fossombronia wattsii] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K+ RR+G + Y L ++ S+ + ++L KQK++ +YG Sbjct: 1 RGPRAKMIRRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ Sbjct: 57 LTERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVD 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 +VNI SY CK GDVI V+ + K + + ++ L ++ P +++++ + + ++ Sbjct: 117 DDTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQMI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 DRD---WINLKINELLVVEYYSR 196 >gi|222103522|gb|ACM44290.1| small ribosomal protein subunit 4 [Entodon flavescens] Length = 203 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSENIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|89147832|gb|ABD62764.1| ribosomal protein 4 [Metzgeria furcata] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ + SY + K S + ++L KQK++ +YG Sbjct: 1 RGPRTKIIRRLGALPGLTSKTFKSKSSY---IDKPASNKKISQYRVRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD+I +K + + ++++E ++ +P +++ + + + R+ Sbjct: 117 KDIVDIPSYNCELGDIITIKNQERYRSNIMERLNSLQKPGIPNHLAFDSTKFIGSVNRMI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWIDLKINELLVVEYYSR 196 >gi|80974140|gb|ABB53763.1| small ribosomal subunit protein 4 [Euptychium dumosum] Length = 202 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K P S ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+L Sbjct: 60 G-ITEQQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTISGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN VNI SYRCK D I VK + + + ++ +P +++ + Sbjct: 119 VNDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLVNK 178 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200 >gi|189485111|ref|YP_001956052.1| 30S ribosomal protein S4 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226695096|sp|B1GZA9|RS4_UNCTG RecName: Full=30S ribosomal protein S4 gi|170287070|dbj|BAG13591.1| 30S ribosomal protein S4 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 208 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGR-----PKSPVNTR--SYGPGLHGQRRKSKPSYFGLQLR 53 MS+ S K+ RR E L+ + +N + PG HG K K S + LR Sbjct: 1 MSRYLGSVCKLCRREKEKLFLKGERCSSNCALNRKRGKNSPGQHGAS-KVKMSDYAKHLR 59 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK ++ YG ++E++F + +K A++ +G NL+ LE RLD +VYR + AR Sbjct: 60 EKQKARRMYG-LTEEQFSNYYKTAEKMKGSAGDNLLKLLELRLDNVVYRLGLASSKKMAR 118 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173 Q VNH ++LVN + +++ YR K GDVI +K K + + + +P ++S + Sbjct: 119 QIVNHGNILVNEKKIDVPRYRLKIGDVITFPEKYKSNVIIKKLIEKMVSSIPAWLSFDKS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + T V P + + + L+VE+YS+ Sbjct: 179 RIAGTVVSEPLAGETSH---PINSQLIVEYYSK 208 >gi|18568424|gb|AAL76081.1| ribosomal protein system 4 [Stereophyllum radiculosum] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|3098182|gb|AAC15539.1| small ribosomal protein 4 [Mielichhoferia bryoides] gi|63191712|gb|AAY34816.1| small ribosomal protein subunit 4 [Mielichhoferia bryoides] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I R+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIXRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T + LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 NRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196 >gi|146261565|gb|ABQ15092.1| ribosomal protein S4 [Hamamelis japonica] Length = 194 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RTGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + + K A + + ++P++++++ +I S Sbjct: 116 VDIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|21914150|gb|AAM81297.1| ribosomal protein subunit 4 [Plagiobryum algovicum] gi|63191693|gb|AAY34808.1| small ribosomal protein subunit 4 [Rosulabryum albolimbatum] Length = 198 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|63078642|gb|AAY29407.1| ribosomal protein S4 [Trichostomum crispulum var. angustifolium] Length = 197 Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S + K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVIITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|325068848|ref|ZP_08127521.1| 30S ribosomal protein S4 [Actinomyces oris K20] Length = 207 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L + R YGPG HG+ R+ S + ++L+ KQ+++ YG I E + + +F Sbjct: 16 LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 74 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +EA R +G T +L+ LE RLD +V R+ TI ARQ V HRH+LV+G+ V+ SYR Sbjct: 75 EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 134 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190 K G I+V+ +S+ + A+ A RD VPEY++V+ + + AT VR P + Sbjct: 135 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPEYLNVDLEKLSATLVRRPKRDE--- 191 Query: 191 YPVIMQPNLVVEFYSR 206 PV +VVE+YSR Sbjct: 192 VPVTCDVQMVVEYYSR 207 >gi|66866233|gb|AAY57786.1| small ribosomal protein 4 [Hymenodontopsis mnioides] Length = 205 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 13/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 2 YRGPRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 59 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVA 177 N R V+I SYRCK D I +K + K A + D +P +++ N Sbjct: 118 NNRIVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNLDFYQKYKIPNHLTYNSLEKKG 177 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 178 LVNQI---LDRESIGLKINELLVVEYYSR 203 >gi|67035710|gb|AAY62786.1| small ribosomal protein subunit 4 [Saelania glaucescens] Length = 194 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A V++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HESIGLKINELLVVEYYSR 192 >gi|228017217|gb|ACP52037.1| ribosomal protein S4 [Pinus leiophylla var. chihuahuana] Length = 201 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKXXXGLXXXXXXNRK----DXMNRSSSRKISQYRIRLEEKQKLRY 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199 >gi|67036124|gb|AAY62988.1| small ribosomal protein subunit 4 [Bissetia lingulata] Length = 198 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIIDKNIEFYQKSKIPNHLTYSSLEKKGLINQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|300870623|ref|YP_003785494.1| 30S ribosomal protein S4 [Brachyspira pilosicoli 95/1000] gi|300688322|gb|ADK30993.1| 30S ribosomal protein S4 [Brachyspira pilosicoli 95/1000] Length = 208 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENL------WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR L K + + PG ++ K Y G+Q+R Sbjct: 1 MARYRDASCRLCRREKMKLMLKGERCLTAKCAITKKREVPGPTNRKMKQLSEY-GIQMRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG I EK+FR+ + EA+R G T NL+ LE RLD +VYR + ARQ Sbjct: 60 KQKVKRIYG-ILEKQFRNYYHEANRVAGVTGENLLRLLELRLDNVVYRLGLAKSRAQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173 FV H + VNG+++++ SY K GD + Q+ + V E + + VP ++S++ Sbjct: 119 FVQHGFINVNGKTMSVPSYSMKVGDKVSFSQRGNSITQVKELLDGLKSEYVPAWLSLDLS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P + + YP + L++E+YS+ Sbjct: 179 AKQGEIVTLPIR-EHIEYP--INEQLIIEYYSK 208 >gi|37548855|gb|AAO32696.1| ribosomal protein 4 [Pogonatum cirratum] Length = 198 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 5 CKIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITER 60 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN V Sbjct: 61 QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIV 120 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 I SYRCK D I +K + + A + + +++ +P +++ N + +I L Sbjct: 121 TIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLDKKGLVNQI---LD 177 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 RESIGLKINELLVVEYYSR 196 >gi|86438878|emb|CAJ55409.1| small ribosomal protein 4 [Plagiochila chonotica] Length = 192 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+ + SY + K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ Sbjct: 58 G-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHIS 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + + Sbjct: 117 INNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLV 200 + + + + LV Sbjct: 177 MINR---EWINLKINELLV 192 >gi|261337327|ref|ZP_05965211.1| ribosomal protein S4 [Bifidobacterium gallicum DSM 20093] gi|270277700|gb|EFA23554.1| ribosomal protein S4 [Bifidobacterium gallicum DSM 20093] Length = 208 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++ + G T + +++ LE+RLD +V RA T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGIARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKPKSQTMVPFQIAAEGVHRDVLPPVPGYLDVNLPSLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + PV + VVEFY+R Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208 >gi|118411185|ref|YP_874579.1| 30S ribosomal protein S4 [Thalassiosira pseudonana] gi|125987754|sp|A0T0W7|RR4_THAPS RecName: Full=30S ribosomal protein S4, chloroplastic gi|116739932|gb|ABK20802.1| 30S ribosomal protein S4 [Thalassiosira pseudonana] Length = 205 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 10/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR---RKSKPSYFGLQLRAKQK 57 MS+ K +I RR+G+ K ++ PG HG+ K K + +G++L KQK Sbjct: 1 MSRYRGPKLRITRRLGDLPGLTQKKS--KKTTRPGQHGKNLGEGKKKTTEYGIRLEEKQK 58 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +K YG ISE + KEA R G T L+ LE RLDTI + + PTI AARQ VN Sbjct: 59 LKFNYG-ISENQLYHYIKEARRRNGVTGLILLQLLEMRLDTICFSLGYAPTIAAARQLVN 117 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE-YISVNHDNMV 176 H H++VN + ++I S++C+ GDVI +K KS + + P +++ N + + Sbjct: 118 HGHIIVNDKVIDIPSFQCQIGDVIGIKSKSPAKKIIENNLKTINFSAPPAHLTFNKEKLE 177 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + V+E+YSR Sbjct: 178 GVVQNYCDRSELLLDLNELL---VIEYYSR 204 >gi|37960575|gb|AAP70657.1| small ribosomal protein 4 [Sphagnum angustifolium] gi|37960589|gb|AAP70664.1| small ribosomal protein 4 [Sphagnum fuscum] gi|37960597|gb|AAP70668.1| small ribosomal protein 4 [Sphagnum portoricense] gi|37960599|gb|AAP70669.1| small ribosomal protein 4 [Sphagnum pulchrum] gi|37960601|gb|AAP70670.1| small ribosomal protein 4 [Sphagnum quinquefarium] gi|37960607|gb|AAP70673.1| small ribosomal protein 4 [Sphagnum squarrosum] gi|37960613|gb|AAP70676.1| small ribosomal protein 4 [Sphagnum subnitens] gi|37960619|gb|AAP70679.1| small ribosomal protein 4 [Sphagnum wulfianum] Length = 195 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|170761244|ref|YP_001788735.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree] gi|169408233|gb|ACA56644.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree] Length = 197 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ R K S +G QL KQK++ Sbjct: 1 MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K+A +S+ T L+ LE RLD IVYR F +I ARQ VNH H Sbjct: 56 YYGVL-EKQFLRYIKKAMKSKERTGDVLLRSLECRLDNIVYRIGFSSSIRQARQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG +NI SY K GD+I +++K ++ + ++ YI ++D + Sbjct: 115 ILVNGGKINIPSYAVKIGDIITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P ++ P+ LVVE YS+ Sbjct: 175 KEPERVE---IPIDANETLVVELYSK 197 >gi|67035851|gb|AAY62852.1| small ribosomal protein subunit 4 [Colobodontium vulpinum] Length = 199 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGILPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQQKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|296129661|ref|YP_003636911.1| ribosomal protein S4 [Cellulomonas flavigena DSM 20109] gi|296021476|gb|ADG74712.1| ribosomal protein S4 [Cellulomonas flavigena DSM 20109] Length = 208 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS S+ ++ R +G L + R Y PG HG+ R+ S + ++LR KQ++ Sbjct: 1 MSSVTRSRRQVRLSRALGLALTPKAVKHFEKRPYPPGEHGRARRRTESDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y + EK+ ++ A ++ G T L+ LE+RLD +V RA F TI ARQ V H Sbjct: 61 RAQYA-LREKQLAKAYENARKAPGLTGEALVEDLETRLDALVLRAGFARTILQARQTVTH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174 RHVLV+G+ V+ S+R KEG +++K KS+ A+ A RD VP Y+ V + Sbjct: 120 RHVLVDGKIVDRPSFRVKEGQTLQIKPKSQATVPFQVAAAGAHRDVLPAVPGYLEVQLEK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + AT VR P + PV + LVVE+Y+R Sbjct: 180 LSATLVRRPKRAE---VPVTCEVQLVVEYYAR 208 >gi|12642234|gb|AAK00199.1| rps4 [Aphanorrhegma serratum] Length = 190 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 9/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ S Q K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGVLPGLTNKTLQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQLL 55 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V+I Sbjct: 56 NYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIP 115 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I VK + K A + + +++ VP +++ + +I L Sbjct: 116 SYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRES 172 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 IGLKINELLVVEYYSR 188 >gi|66866241|gb|AAY57789.1| small ribosomal protein 4 [Antitrichia californica] Length = 207 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 13/210 (6%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 3 RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTFNKKISQYRIRLEEKQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMV 176 VN V+I SYRCK D I +K + K A + + ++ +P +++ + Sbjct: 119 VNNCIVDIASYRCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 179 GLVNQI---LDRESIGLKINELLVVEYYSR 205 >gi|63191767|gb|AAY34843.1| small ribosomal protein subunit 4 [Cyrtopodendron vieillardii] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRARIIRRLGALPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + + +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P +++ + +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKNRQKSQTIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|78369605|gb|ABB43032.1| ribosomal protein 4 [Syrrhopodon tristichus] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKILRRLGTLSGLTIKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY+CK D I +K + K +++ + + P ++ N +I Sbjct: 117 NNRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTSFFPKYKTPNHLIFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|238928129|ref|ZP_04659889.1| ribosomal protein S4 [Selenomonas flueggei ATCC 43531] gi|238884089|gb|EEQ47727.1| ribosomal protein S4 [Selenomonas flueggei ATCC 43531] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G +S +TR +R K S +GLQL+ KQK K Sbjct: 1 MAIDRVPVLKRCRALGLEPATLGRSRQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR +++A + G T NL+ LE R+D +V+R T ARQ V H H Sbjct: 55 IYGVL-ERQFRGYYEKAKKMSGVTGENLLCLLERRMDNVVFRLGLANTRRQARQLVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I S +EGDVIEV +KS+ A E + + P +++ + N+ T Sbjct: 114 FTVNGKRVDIPSALVREGDVIEVAEKSRSGAFFKELKESSNALSAPAWLTADQANLTGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + V + +VE YS+ Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197 >gi|309322067|ref|YP_003933885.1| ribosomal protein S4 [Erodium texanum] gi|197131480|gb|ACH47258.1| ribosomal protein S4 [Erodium texanum] gi|300069160|gb|ADJ66282.1| ribosomal protein S4 [Erodium texanum] Length = 220 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 30/227 (13%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + P K + ++L KQK++ Sbjct: 1 MSRYRGPRVKKIRRLGALPGLTSKIPKGKKPETP-----SPFKKKKQYHIRLEEKQKLRF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 56 HYG-LTERQLLQYVRLAGKAKGQTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----------------- 163 +LVNGR V+I SYRCK D+I ++K K + + R Sbjct: 115 ILVNGRIVDIPSYRCKPRDIITGREKEKSRTLIQNYLDSSSRKRNSLDSSSRKRKKLAKP 174 Query: 164 ----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P +++ +I + ++ LVVE+YSR Sbjct: 175 NHLTTPNHLTTQQGQQRGLVNKIIDR---ESVGLEIKELLVVEYYSR 218 >gi|49182811|gb|AAT57867.1| small ribosomal protein [Tetralophozia setiformis] Length = 195 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN + Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISVNNDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY K GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYSRKSGDIITIRNKQKSQSIITKNINLFQKSKIPSHLTFDLTQLRGSVNQTVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|63191833|gb|AAY34876.1| small ribosomal protein subunit 4 [Syntrichia ruralis] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 NNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LNQESIGLKINELLVVEYYSR 197 >gi|156598667|gb|ABU85589.1| ribosomal protein S4 [Scaevola aemula] Length = 232 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 42/239 (17%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G KS Y Q+ K S + +L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGTLPGLSTKSV-----YDLSEKEQKPPWKKSLYCTRLQEKQKLRF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G+T L+ LE RLD I++R PT+ ARQ VNH+H Sbjct: 56 HYG-LTERQLLKYVRIAGKAKGETGQVLLQLLEMRLDNILFRLGMAPTLPGARQLVNHKH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------ 162 +LVNGR VNI SYRCK D IE + K A + + ++ Sbjct: 115 ILVNGRIVNIPSYRCKPRDTIEARDDQKSRALIQKNLAARKKYLGAKAKKYSNSHKSIRG 174 Query: 163 ---------------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP ++++ RI + + LVVE+YSR Sbjct: 175 QKRIEKEIKIEKKRKEVPGHLTIQPLQYKGLVKRIIDR---ESVGLTINELLVVEYYSR 230 >gi|17025816|gb|AAL32075.1| ribosomal protein 4 [Syrrhopodon croceus] gi|78369615|gb|ABB43037.1| ribosomal protein 4 [Syrrhopodon croceus] Length = 198 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLSGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SY+CK D I +K + K +++ + + + +P +++ N +I Sbjct: 117 NNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKIPNHLTFNSVEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|319777073|ref|YP_004136724.1| 30S ribosomal protein s4 [Mycoplasma fermentans M64] gi|318038148|gb|ADV34347.1| 30S ribosomal protein S4 [Mycoplasma fermentans M64] Length = 198 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 11/206 (5%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 + K RR G ++ K S R+Y PG HG +R K S +GL L KQK+K Sbjct: 2 RYRGPVFKKSRRYGFSILETGKEFSKGRKRTYAPGQHGDKR-VKLSDYGLHLYEKQKVKY 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ + A + +G T L+ LESRLD +VYRA F T ARQ V+H H Sbjct: 61 LYG-LNEKQMHKYYIRATKIKGVTGTVLLQLLESRLDNLVYRAGFASTRRQARQLVSHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +NG +I S + G I++K+KS++ + L +R +++++ ++ Sbjct: 120 FTLNGHKADIPSMNVEVGSKIQLKEKSQKNKIIEAN--LKDRSAAKWLTI--KGFEVSYD 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P ++ N +VE YS+ Sbjct: 176 RLPDRSELHP---EIKENFIVELYSK 198 >gi|42556446|gb|AAS19818.1| small ribosomal protein 4 [Lepidogyna hodgsoniae] Length = 191 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTPKQKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHILINNETVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K + + + ++P +++++ + + ++ Sbjct: 117 SYNCEPGDIITIRNGEKSQSIITRNMDSFHKLEIPNHLTLDSKKLQGSINKMIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VDLKVNELLVVEYYSR 189 >gi|37992431|gb|AAR06394.1| small ribosomal protein 4 [Beeveria distichophylloides] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGILPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + + +P +++ N +I Sbjct: 117 NKFIVDIPSYRCKPQDFITIKNQRKSEAIINKNIEFYPKSKIPNHLTYNFLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|37992467|gb|AAR06412.1| small ribosomal protein 4 [Crossomitrium epiphyllum] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+L+ Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K K K + + + ++ +P +++ N +I Sbjct: 117 NDFLVDIPSYRCKSQDFITIKNKQKSKTIISKNIEFYQKYKIPNHLTYNFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|67035847|gb|AAY62850.1| small ribosomal protein subunit 4 [Pterogoniopsis cylindrica] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|46811058|gb|AAT01847.1| small ribosomal protein 4 [Treubia lacunosa] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + Y ++ K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGVLPGLTNKTLKSKLGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVGIARKAKGSTGEVLLQLLEMRLDNIIFRLGLAFTIPGARQLVNHRHILINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 ++V+I SY CK D+I +K K + + + + +P +++ + + +I Sbjct: 117 KTVDIPSYHCKPKDLITIKNKPTSQLLITKNIDYSTKYKIPNHLTFDSVKKIGLVNQIID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EFINLKINELLVVEYYSR 195 >gi|24473804|gb|AAL82745.1| small ribosomal subunit protein 4 [Leptostomum menziesii] Length = 196 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +V+R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|49182726|gb|AAT57825.1| small ribosomal protein [Isotachis lyallii] Length = 195 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD I V+ + K + + + L +P +++ + + + + Sbjct: 117 VDIPSYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ELINLKINELLVVEYYSR 193 >gi|37960573|gb|AAP70656.1| small ribosomal protein 4 [Sphagnum affine] gi|37960609|gb|AAP70674.1| small ribosomal protein 4 [Sphagnum steerei] Length = 195 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + +Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|222103484|gb|ACM44271.1| small ribosomal protein subunit 4 [Leucodon pendulus] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + ++ RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRVIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|222103544|gb|ACM44301.1| small ribosomal protein subunit 4 [Climacium japonicum] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P ++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|222103430|gb|ACM44244.1| small ribosomal protein subunit 4 [Oxystegus tenuirostris] Length = 202 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S K S + ++L KQK++ +YG Sbjct: 5 RGPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG- 60 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 61 ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 120 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 121 NRIVNIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI- 179 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 --LDQELIGLKINELLVVEYYSR 200 >gi|63191745|gb|AAY34832.1| small ribosomal protein subunit 4 [Goniobryum subbasilare] Length = 198 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 DRIVDIPSYRCKPQDFITIKDQQKYQTIISKNIYFYQKYKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|31544739|ref|NP_853317.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. R(low)] gi|41017821|sp|Q7NAV0|RS4_MYCGA RecName: Full=30S ribosomal protein S4 gi|31541585|gb|AAP56885.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. R(low)] gi|284930807|gb|ADC30746.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. R(high)] gi|284931289|gb|ADC31227.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. F] Length = 207 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 10/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAKQ 56 MS+ S ++ RR+ ++ K N +S PG HG + K S +G QL+ KQ Sbjct: 1 MSRYTGSIYRKARRLNFSILESGKEFTNNKSKKGVKVPGQHGSLIRPKLSNYGEQLQEKQ 60 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 KM+ YG +++++FR +F + + G + NL LESRLD +V+R F PT ARQ V Sbjct: 61 KMQFMYG-LNDRQFRRLFAVSKKMSGILTMNLFRTLESRLDNLVFRMGFAPTRRGARQLV 119 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 +H HVLVNG++ +I S G V+E+K ++ L V A + + V ++ VN + Sbjct: 120 SHGHVLVNGKTFDIPSALISLGSVVELKPRAHNLPLVKLALES--KAVAPFVEVNKKTLS 177 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T+VR P + P + VVE+Y R Sbjct: 178 GTYVRYPERNE---LPADVNETYVVEYYKR 204 >gi|63145917|gb|AAY33896.1| small ribosomal protein 4 [Symphyogyna marginata] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G L G + +RS +K S + ++L KQK++ +YG + Sbjct: 1 GPRAKIIRRLGA-LPGXSYEMIGSRSGYTNQLATNKK--ISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH++VN Sbjct: 57 TERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184 +VNI SY CK DVI +K + + + + + L ER +P +++ + + +I Sbjct: 117 NAVNIPSYNCKPQDVITIKDRRESQSVITKNIHLFRERKIPNHLTFDSTRFCGSVNQIID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWISLKINELLVVEYYSR 195 >gi|42556498|gb|AAS19844.1| small ribosomal protein 4 [Scapania undulata] Length = 191 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I + K K + + + L ++ +P +++ + + + + Sbjct: 117 SYNCEPGDIITIGNKQKSQSIITKNLNLFQKLKIPSHLTFDLAQLQGYVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|67035801|gb|AAY62831.1| small ribosomal protein subunit 4 [Neolindbergia cladomnioides] Length = 198 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQLTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY+CK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|320093741|ref|ZP_08025600.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979326|gb|EFW10817.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 178 str. F0338] Length = 207 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 9/211 (4%) Query: 1 MSKRESSK-HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M+K S K + R +G L + R YGPG HG+ R+ + S + ++L+ KQ+++ Sbjct: 1 MAKNRSRKQVRESRALGLALTPKAVRYFEKRPYGPGEHGRSRRRQDSDYAVRLKEKQRLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E + R F+EA R+ G T NL+ LE R+D +V RA TI ARQFV HR Sbjct: 61 AQYG-IREAQLRRAFEEARRTAGLTGENLVELLEMRIDALVLRAGIARTIQQARQFVVHR 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNM 175 H+LV+G+ V+ S+R G ++VK KS+ A+Q RD VP+Y+ V+ + + Sbjct: 120 HILVDGKIVDRPSFRVNPGQTLQVKPKSQTTVPFEIAAQGIHRDVLPQVPDYLDVDLERL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT VR P + PV +VVE YSR Sbjct: 180 KATLVRRPKRAE---VPVTCDVQMVVEHYSR 207 >gi|116010489|emb|CAL37351.1| ribosomal protein S4 [Gentiana cruciata] Length = 194 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKGP----RAGTDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVN Sbjct: 56 RQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNSHI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K + ++ + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITAKTEQKSRGLIQKSLDSSPHEELPSHLTLHPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|63078577|gb|AAY29375.1| ribosomal protein S4 [Pleurochaete luteola] gi|63078579|gb|AAY29376.1| ribosomal protein S4 [Pleurochaete luteola] gi|63078587|gb|AAY29380.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078589|gb|AAY29381.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078593|gb|AAY29383.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078595|gb|AAY29384.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078597|gb|AAY29385.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078599|gb|AAY29386.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078607|gb|AAY29390.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078632|gb|AAY29402.1| ribosomal protein S4 [Tortella nitida] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S + K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|63078640|gb|AAY29406.1| ribosomal protein S4 [Trichostomum brachydontium var. cuspidatum] gi|63078644|gb|AAY29408.1| ribosomal protein S4 [Trichostomum pallidisetum] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S + K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|62287267|sp|Q6H9L2|RR4_EQUGI RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927199|emb|CAE47535.1| small ribosomal protein 4 [Equisetum giganteum] Length = 207 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+ +NL G V ++ Q + K S +G++L AKQ+++ Sbjct: 1 MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R FVPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V++ S+ CK D+I + + + + + A+ +PE++++ Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRIESFAKDQIPEHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|20531079|gb|AAM27361.1| ribosomal protein 4 [Diphyscium chiapense] Length = 194 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 KIIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VN Sbjct: 58 LLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVN 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K +++ +++ +P +++++ +I L Sbjct: 118 IPSYRCKPQDFITIKDRQKSQNIIVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LDR 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 ESIGLKINELLVVEYYSR 192 >gi|269956478|ref|YP_003326267.1| 30S ribosomal protein S4 [Xylanimonas cellulosilytica DSM 15894] gi|269305159|gb|ACZ30709.1| ribosomal protein S4 [Xylanimonas cellulosilytica DSM 15894] Length = 208 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + R Y PG HG+ R+ S + ++LR KQ+++ Y + EK Sbjct: 11 VRLSRALGIALTPKAVKHFEKRPYPPGEHGRARRRTESDYAVRLREKQRLRAQYA-LREK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + +++ A ++ G T ++ LE+RLD +V RA F TI ARQ V HRH+L++G+ V Sbjct: 70 QLVKVYENARKTAGLTGEVMVEDLETRLDALVLRAGFARTILQARQTVTHRHILIDGKIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + S+R K G ++VK KS+ A+ A RD VP Y+ V + + AT R P Sbjct: 130 DRPSFRVKPGQTLQVKPKSQTTTPFQVAAAGAHRDVLPAVPGYLEVQLEKLQATLTRRPK 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + LVVEFY+R Sbjct: 190 RAE---VPVTCEVQLVVEFYAR 208 >gi|42556444|gb|AAS19817.1| small ribosomal protein 4 [Lepicolea scolopendra] Length = 191 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L + +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNKEKSQSIITKNINLFQNLKIPSHLTFDSTKLRGSITQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ITLKINELLVVEYYSR 189 >gi|17025853|gb|AAL32092.1| ribosomal protein 4 [Mitthyridium sp. Wall 3885] Length = 198 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I Sbjct: 117 NNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|85001769|gb|ABC68422.1| small ribosomal protein 4 [Goniomitrium acuminatum] Length = 196 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGVLPGLSNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A R++G T L+ LE RLD +V+R PTI ARQ VNHRHVLVN Sbjct: 57 ERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + +++ VP +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNRQKSQAIITKNIDFSQKYKVPNHLTFDSVQKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|308233884|ref|ZP_07664621.1| 30S ribosomal protein S4 [Atopobium vaginae DSM 15829] gi|328943591|ref|ZP_08241056.1| 30S ribosomal protein S4 [Atopobium vaginae DSM 15829] gi|327491560|gb|EGF23334.1| 30S ribosomal protein S4 [Atopobium vaginae DSM 15829] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++ +N +S ++R+ + S +G QLR KQK K Sbjct: 1 MAIDRTPVLKRCRQLEIEPVVMG---INKKSN---RQPRQRRRQLSEYGTQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+FR + +A ++ G T NL+S LE+RLD +V+R F T +RQ + H H Sbjct: 55 IYG-ILEKQFRGYYTKAMKAEGITGDNLMSLLETRLDNVVFRLGFARTRKESRQTIRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VNG+ V+I SY+ K DVI V K+K L + E+ ++ER VP ++ V+ + + Sbjct: 114 ITVNGKRVDIPSYQVKADDVIAVSSKAKDLLPIKESLIVSERMAVPAWLEVDVEKLQGKV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++IP + + + L+VE YS+ Sbjct: 174 LQIPVRDQ---IDLDIDAQLIVELYSK 197 >gi|37992463|gb|AAR06410.1| small ribosomal protein 4 [Cladomniopsis crenatoobtusa] Length = 199 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K K + + + L ++ +P +++ + +I Sbjct: 117 NDYIVNIPSYRCKPQDFILIKNKKNSEVVIDKNTDLYQKYKIPNHLTYSSLEKKGLVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|224282905|ref|ZP_03646227.1| 30S ribosomal protein S4 [Bifidobacterium bifidum NCIMB 41171] gi|310287348|ref|YP_003938606.1| SSU ribosomal protein S4P [Bifidobacterium bifidum S17] gi|311064189|ref|YP_003970914.1| 30S ribosomal protein S4P RpsD [Bifidobacterium bifidum PRL2010] gi|313140064|ref|ZP_07802257.1| 30S ribosomal protein S4 [Bifidobacterium bifidum NCIMB 41171] gi|309251284|gb|ADO53032.1| SSU ribosomal protein S4P [Bifidobacterium bifidum S17] gi|310866508|gb|ADP35877.1| RpsD SSU ribosomal protein S4P [Bifidobacterium bifidum PRL2010] gi|313132574|gb|EFR50191.1| 30S ribosomal protein S4 [Bifidobacterium bifidum NCIMB 41171] Length = 208 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG +SEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-VSEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + RS +++A R+ G T + +++ LE RLD +V RA T ARQFV HRH+LV+G V Sbjct: 70 QLRSAYEKATRTAGQTGNAMLTDLEVRLDNLVLRAGIARTTAQARQFVVHRHILVDGNIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+V+ KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVRAKSQTMVPFQIAAEGVHRDVLPPVPGYLDVNLASLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + VVEFY+R Sbjct: 190 VEE---IPVQVNIQYVVEFYAR 208 >gi|145848875|emb|CAJ91114.1| ribosomal protein S4 [Acrocladium chlamydophyllum] Length = 196 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 IVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|49182756|gb|AAT57840.1| small ribosomal protein [Marsupidium latifolium] Length = 195 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K Y + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKVLKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C GD+I VK + K + +++ L ++ +P +++ + + + + Sbjct: 117 VDIPSYNCGPGDIITVKNERKSQSMIIKNINLFQKSKMPSHLTFDSTELRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIDLKINELLVVEYYSR 193 >gi|37548887|gb|AAO32712.1| ribosomal protein 4 [Polytrichum subpilosum] Length = 194 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CKIIRRLGAFPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 57 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|20531085|gb|AAM27364.1| ribosomal protein 4 [Diphyscium suzukii] Length = 193 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VN Sbjct: 57 LLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K +++ +++ +P +++++ +I L Sbjct: 117 IPSYRCKPQDFITIKDRQKSQDIIVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|48927211|emb|CAE47541.1| small ribosomal protein 4 [Equisetum ramosissimum subsp. debile] Length = 207 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+ +NL G V ++ Q + K S +G++L AKQ+++ Sbjct: 1 MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKKKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R FVPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V++ S+ CK D+I + + + + + A+ +PE++++ Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|67035998|gb|AAY62925.1| small ribosomal protein subunit 4 [Toloxis imponderosa] Length = 197 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 CMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|52783272|sp|Q6H9L1|RR4_EQUHY RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927201|emb|CAE47536.1| small ribosomal protein 4 [Equisetum hyemale] Length = 207 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 112/210 (53%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+ +NL G V ++ Q + K S +G++L AKQ+++ Sbjct: 1 MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKKKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R FVPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V++ S+ CK D+I ++ + + + + A+ +PE++++ Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIEAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|37960587|gb|AAP70663.1| small ribosomal protein 4 [Sphagnum cymbifolioides] Length = 195 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + +Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFISIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|46486558|gb|AAS98715.1| ribosomal protein subunit 4 [Bescherellia elegantissima] Length = 198 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + ++ +P +++ + +I Sbjct: 117 NCIVDIASYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|63078611|gb|AAY29392.1| ribosomal protein S4 [Tortella arctica] gi|63078613|gb|AAY29393.1| ribosomal protein S4 [Tortella arctica] gi|63078630|gb|AAY29401.1| ribosomal protein S4 [Tortella inclinata] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S + K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|24473844|gb|AAL82766.1| small ribosomal subunit protein 4 [Plagiobryum zierii] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K A + + L ++ + P +++ N +I Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAVISKNLNLYQKYETPNHLTYNFLKKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|99034786|ref|ZP_01314708.1| hypothetical protein Wendoof_01000474 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 200 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 87/202 (43%), Positives = 125/202 (61%), Gaps = 2/202 (0%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K++I RR+G NLWGR K PVN R Y PG HG K S FG Q A +K K Sbjct: 1 MTTVITRKYRISRRLGVNLWGRAKDPVNKRKYPPGQHGILGFKKLSDFGKQFAAHKKFKF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY IS K+ R F +A +G T+ N I LESRL +++Y + VPTI++A+Q ++H+H Sbjct: 61 YYA-ISSKQLRRTFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VN + VNI SYR K GD+I++++++ ++ V+EA Q ER P+Y+ + ++ Sbjct: 120 VTVNDKVVNISSYRVKPGDIIKIRERAAKIPVVVEAEQKQERKAPDYLEADSKEHSVKYL 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVE 202 R P +VPY M+ NLVVE Sbjct: 180 RSPQ-YSEVPYSADMEVNLVVE 200 >gi|67036030|gb|AAY62941.1| small ribosomal protein subunit 4 [Schwetschkea grateloupii] Length = 199 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D + +K + K + + + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|313895093|ref|ZP_07828650.1| ribosomal protein S4 [Selenomonas sp. oral taxon 137 str. F0430] gi|320529822|ref|ZP_08030899.1| ribosomal protein S4 [Selenomonas artemidis F0399] gi|312975988|gb|EFR41446.1| ribosomal protein S4 [Selenomonas sp. oral taxon 137 str. F0430] gi|320137840|gb|EFW29745.1| ribosomal protein S4 [Selenomonas artemidis F0399] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G +S +TR +R K S +GLQL+ KQK K Sbjct: 1 MAIDRVPVLKRCRALGLEPATLGRSRQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR +++A + G T NL+S LE R+D +V+R T ARQ V H H Sbjct: 55 IYGVL-ERQFRGYYEKAKKMSGVTGENLLSLLERRIDNVVFRLGLANTRRQARQLVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I S EGDVIEV +KS+ A E + + P +++ + N+ T Sbjct: 114 FTVNGKRVDIPSALVHEGDVIEVAEKSRASAFFKELKESSNALSAPAWLTADQANLTGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + V + +VE YS+ Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197 >gi|188012809|gb|ACD45543.1| ribosomal protein S4 [Riella sp. SC s.n.] Length = 195 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + Y ++ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINDNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK D+I +K + K + + + ++ +P +++ + +I Sbjct: 117 VDIPSYNCKPKDIITIKDRQKSQSIITKNVNSFQKPKIPNHLTFDLIQFKGLVNQIIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIYLKINELLVVEYYSR 193 >gi|28476386|gb|AAO44475.1| 30S ribosomal protein S4 [Tropheryma whipplei str. Twist] Length = 261 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 S+ ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG + Sbjct: 61 SRTRLSRALGVPLTPKAARLMEVRPYPPGQHGRFRRKGDSDYAVRLREKQRLRGQYG-LR 119 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+ S++ EA R +G NL+ LE RLD +V RA F +I ARQ V HRH+LV+G+ Sbjct: 120 EKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVVHRHILVDGK 179 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATFVRI 182 V+ SY G ++VK KS L A+ DV P YI + + + VR Sbjct: 180 LVDRPSYSVSPGQTVKVKPKSVPLDPFQVAASGGHADVLPPIPGYIEADLEGLSFRLVRR 239 Query: 183 PSSLKDVPYPVIMQPNLVVEFY 204 P + PV LVVE+Y Sbjct: 240 PKRSE---VPVTCNVQLVVEYY 258 >gi|330468292|ref|YP_004406035.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032] gi|328811263|gb|AEB45435.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032] Length = 202 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K ++ R +G L + V R Y PG+HG+ R+ Y ++L KQ+++ Y ++S Sbjct: 6 PKARLSRALGIPLTRKCVRYVERRPYPPGVHGRSRRKTSDYQ-VRLLEKQRLRHQY-NVS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R F EA R G T +L++ LE RLD +V RA +I+ ARQ V H H V+GR Sbjct: 64 EAQLRRTFDEAARRTGKTGESLVTLLEQRLDAVVLRAGMARSIYQARQLVGHGHFTVDGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP--EYISVNHDNMVATFVRIPS 184 V+ SYR + G V+ V+Q+S+ L A+ A + Y+SV+ + AT +R P+ Sbjct: 124 KVDRPSYRLRPGQVVAVRQRSQALPPFQLAAAGAHAEEQPRPYLSVDLSGLRATLLREPA 183 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV+ LVVE+YSR Sbjct: 184 RRE---VPVVCDEQLVVEYYSR 202 >gi|49182734|gb|AAT57829.1| small ribosomal protein [Jungermannia exsertifolia] Length = 195 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTLKPKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + + Sbjct: 117 VDIPSYSCQLGDIITVKNKQKSQSMITKNINLFQKLKIPSHLTFDSIELRGYVNQ---RI 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NREWINLKINELLVVEYYSR 193 >gi|42556438|gb|AAS19814.1| small ribosomal protein 4 [Leiomitra lanata] Length = 191 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNEIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDTITIRNKHKSQSIITKNINLFQKLKIPSHLTFDLIQLKGSVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|21914152|gb|AAM81298.1| ribosomal protein subunit 4 [Bryum arachnoideum] gi|21914160|gb|AAM81302.1| ribosomal protein subunit 4 [Bryum cyathiphyllum] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKAPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|166031631|ref|ZP_02234460.1| hypothetical protein DORFOR_01331 [Dorea formicigenerans ATCC 27755] gi|166028608|gb|EDR47365.1| hypothetical protein DORFOR_01331 [Dorea formicigenerans ATCC 27755] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPVYLGIDKKSNRQL------KRSNRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ F++A R G T NL+ LESRLD +V+R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYFEKAQRMNGMTGDNLMILLESRLDNVVFRMGFARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GD +E+K+ K E + R VP+++ V+ +N+ T Sbjct: 114 VLVNGKQVNIPSYLIKAGDTVEIKEAKKSSPRYKEIVEVTGGRMVPDWLEVDQENLKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPAR---EAIDVPVDEMLIVELYSK 197 >gi|47606900|gb|AAT36370.1| ribosomal protein subunit 4 [Glyphothecium sciuroides] Length = 199 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + + + ++ +P +++ + +I Sbjct: 117 NDCIVNIPSYRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|67035879|gb|AAY62866.1| small ribosomal protein subunit 4 [Clastobryopsis planula] Length = 199 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I R+G K+ + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIICRLGTLPGLTNKTSQSKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K + + + ++ +P Y++ + +I Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNYLTYSSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 VDR---ELIGLKINELLVVEYYSR 197 >gi|67036060|gb|AAY62956.1| small ribosomal protein subunit 4 [Struckia argentata] Length = 198 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + + A + + + ++ +P +++ N +I Sbjct: 117 DCIVDIPSYRCKPQDFISMKNQRESEAIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|67036032|gb|AAY62942.1| small ribosomal protein subunit 4 [Aerolindigia capillacea] Length = 199 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D + +K + K + + + ++ +P +++ + +I Sbjct: 117 NDGIVDIPSYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|257463990|ref|ZP_05628375.1| 30S ribosomal protein S4 [Fusobacterium sp. D12] gi|317061512|ref|ZP_07925997.1| SSU ribosomal protein S4P [Fusobacterium sp. D12] gi|313687188|gb|EFS24023.1| SSU ribosomal protein S4P [Fusobacterium sp. D12] Length = 195 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 105/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + RS P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRNLGIDPVILGVNKSSNRSLRP-----NANRKPTEYAIQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR ++ EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKLYDEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNGR VNI SYR K GDVI V + SK L + A A + P ++ ++ + Sbjct: 115 VTVNGRRVNIASYRVKVGDVIAVVENSKNLDIIKSAVDTA--NAPAWLQLDKAAFAGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|153831469|ref|ZP_01984136.1| ribosomal protein S4 [Vibrio cholerae 623-39] gi|148873050|gb|EDL71185.1| ribosomal protein S4 [Vibrio cholerae 623-39] Length = 166 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 70/171 (40%), Positives = 105/171 (61%), Gaps = 6/171 (3%) Query: 37 HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96 HG RR Y G+QLR KQK+++ YG + EK+FR+ +KEA R +G+T NL+ LE RL Sbjct: 1 HGARRGRLSEY-GVQLREKQKVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRL 58 Query: 97 DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156 D +VYR F T ARQ V+H+ +LVNG+ VN+ S+ DV+ V++K+K+ + + A Sbjct: 59 DNVVYRMGFGATRAEARQLVSHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAA 118 Query: 157 SQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++AE R+ P +I V+ + M TF R+P + L+VE YS+ Sbjct: 119 LEVAEQREKPTWIEVDVNTMEGTFKRMPERSD---LSADINEQLIVELYSK 166 >gi|21914182|gb|AAM81313.1| ribosomal protein subunit 4 [Bryum caucasicum] Length = 198 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKNKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|292669832|ref|ZP_06603258.1| 30S ribosomal protein S4 [Selenomonas noxia ATCC 43541] gi|292648629|gb|EFF66601.1| 30S ribosomal protein S4 [Selenomonas noxia ATCC 43541] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G ++ +TR +R K S +GLQL+ KQK K Sbjct: 1 MAIDRVPVLKRCRALGIEPATLGRARQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR +++A + G T NL+S LE RLD +V+R T ARQ V H H Sbjct: 55 VYGVL-ERQFRGYYEKAKKMSGVTGENLLSLLERRLDNVVFRLGLANTRRQARQLVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 VNG+ V+I S +EGDVIEV +KS+ A E + + P +++ + N+ T Sbjct: 114 FTVNGKRVDIPSALVREGDVIEVAEKSRASAFFKELKESSNALSAPAWLTADQANLTGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + V + +VE YS+ Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197 >gi|12642232|gb|AAK00198.1| rps4 [Physcomitrium lorentzii] Length = 188 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 100/194 (51%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S Q K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 55 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V+I SY Sbjct: 56 VRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSY 115 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I VK + K A + + +++ VP +++ + +I L Sbjct: 116 RCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRESIG 172 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 LKINELLVVEYYSR 186 >gi|66866203|gb|AAY57775.1| small ribosomal protein 4 [Aulacomnium androgynum] Length = 206 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L QK++ +YG Sbjct: 3 YRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEENQKLRFHYG 59 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 60 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 118 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMVA 177 N V+I SYRCK D I +K + K A + + ++ +P +++ + Sbjct: 119 NDHIVDIPSYRCKPQDFITIKDRQKSEAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKKG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 179 LVNQI---LDRESIGLKINELLVVEYYSR 204 >gi|62287266|sp|Q6H9L0|RR4_EQULA RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927203|emb|CAE47537.1| small ribosomal protein 4 [Equisetum laevigatum] gi|48927205|emb|CAE47538.1| small ribosomal protein 4 [Equisetum myriochaetum] Length = 207 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+ +NL G V ++ Q + K S +G++L AKQ+++ Sbjct: 1 MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R FVPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARGAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V++ S+ CK D+I + + + + + A+ +PE++++ Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|21914164|gb|AAM81304.1| ribosomal protein subunit 4 [Plagiobryum lisae] gi|21914168|gb|AAM81306.1| ribosomal protein subunit 4 [Bryum pachytheca] gi|25986603|gb|AAL92524.1| small ribosomal subunit protein 4 [Bryum ruderale] gi|25986605|gb|AAL92525.1| small ribosomal subunit protein 4 [Bryum radiculosum] gi|27227937|gb|AAN85766.1| ribosomal protein subunit 4 [Bryum kikuyuense] gi|27227941|gb|AAN85768.1| ribosomal protein subunit 4 [Bryum clavatum] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|67035883|gb|AAY62868.1| small ribosomal protein subunit 4 [Taxithelium planum] Length = 199 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I R+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIYRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAATIPEARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K K K + + + +++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNKRKSETIINKNIEFSQKYKIPNHLTYNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 VDR---ELIGLKINELLVVEYYSR 197 >gi|17025806|gb|AAL32070.1| ribosomal protein 4 [Syrrhopodon loreus] Length = 198 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLSGLTNKISQLKSNS---INQSTPNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SY+CK D I +K + K +++ + + + +P +++ N +I Sbjct: 117 NNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKIPNHLTFNSVEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|49182746|gb|AAT57835.1| small ribosomal protein [Lepidozia reptans] Length = 196 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ SY K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|255283706|ref|ZP_05348261.1| ribosomal protein S4 [Bryantella formatexigens DSM 14469] gi|255265771|gb|EET58976.1| ribosomal protein S4 [Bryantella formatexigens DSM 14469] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + + R +R K S +GLQLR KQK K Sbjct: 1 MAVDRTPVLKRCRSLGLDPVYLGIDKKSNREL------KRANRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +K+A+R G T NL++ LESRLD +++R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYKKAERMPGMTGANLMTMLESRLDNVIFRLGFARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GD +E+K+K K E + R VP+++ V+ +N+ AT Sbjct: 114 VLVNGKQVNIPSYLVKAGDTVEIKEKCKGFQRYKEILEATNGRLVPDWLDVDTENLKATV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPAR---EAIDVPVNEMLIVELYSK 197 >gi|227345127|gb|ACP28116.1| small ribosomal protein 4 [Chiloscyphus semiteres] Length = 191 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI AARQ VNH H+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPAARQLVNHGHISINNYIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|6002031|emb|CAA58923.1| ribosomal protein S4 [Bambusa oldhamii] Length = 196 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTP----KPGSNLKNKSHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ +NHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLLNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN R V+I S+ CK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNRRIVDIPSFCCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196 >gi|11228613|gb|AAG33092.1| small ribosomal protein 4 [Arctoa falcata] Length = 190 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K K A +++ +++ VP +++ N +I L Sbjct: 117 YRCKPQDFITIKNCQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|63191835|gb|AAY34877.1| small ribosomal protein subunit 4 [Streptopogon calymperes] Length = 199 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I + + K + + +++ +P ++ N +I Sbjct: 117 NDRIVNIPSYRCKPQDFITISDRKKSQVIITKNVDSSQKSKIPNHLIFNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LNQESIGLKINELLVVEYYSR 197 >gi|18920791|gb|AAL82440.1| ribosomal protein system 4 [Struckia argentata var. zerovii] Length = 197 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITMKNQRKSEAIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|291460744|ref|ZP_06600134.1| ribosomal protein S4 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416703|gb|EFE90422.1| ribosomal protein S4 [Oribacterium sp. oral taxon 078 str. F0262] Length = 212 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + +TR L QRRK +GLQLR KQK K Sbjct: 16 MAVDKVPVLKRCRSLGLDPVFLGVDKKSTRQ----LRNQRRKMSE--YGLQLREKQKAKF 69 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A+R G T NL+ LESRLD++++R T ARQ V HRH Sbjct: 70 IYGVL-EKPFRNYYAKAERMSGQTGENLMILLESRLDSVIFRMGLARTRREARQVVGHRH 128 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 V VNG+ VNI SY GDVI +K+ K + + A R VP ++ V+ + + AT Sbjct: 129 VTVNGKLVNIPSYLVSAGDVIAIKESMKSAQRYKDILEVTAGRMVPAWLEVDQEKLSATV 188 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P + V + L+VE YS+ Sbjct: 189 KQLPHREE---IDVPVNEMLIVELYSK 212 >gi|67036010|gb|AAY62931.1| small ribosomal protein subunit 4 [Entodontopsis leucostega] Length = 197 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD ++R PTI ARQ +NHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNXIFRLGMAPTIPGARQLINHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|307828400|gb|ADN94998.1| small ribosomal protein 4 [Fossombronia wattsii] Length = 197 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G + Y L ++ S+ + ++L KQK++ +YG + Sbjct: 1 GPRAKMIRRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ Sbjct: 57 TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDD 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +VNI SY CK GDVI V+ + K + + ++ L ++ P +++++ + + ++ Sbjct: 117 DTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQMID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RD---WINLKINELLVVEYYSR 195 >gi|118626051|emb|CAL39334.1| small ribosomal protein 4 [Herbertus aduncus] Length = 191 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKTKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLYGSINQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|49182797|gb|AAT57860.1| small ribosomal protein [Schistochila lehmanniana] Length = 195 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIIRRLGILPGLTSKTPKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 VDIPSYNCELGDIIAIKNKQKSQSMITRNLNLLQKPKIPNHLTFDPTQLRGLVNQ---RV 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HRESINLKINELLVVEYYSR 193 >gi|63191777|gb|AAY34848.1| small ribosomal protein subunit 4 [Psilopilum cavifolium] Length = 195 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPXLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R Sbjct: 57 RQLLNYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42556432|gb|AAS19811.1| small ribosomal protein 4 [Isotachis humectata] Length = 191 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTPKQKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ +N +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISINNETVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K + + + ++P +++ + + + ++ Sbjct: 117 SYNCEPGDIITIRNGEKSQSIITRNINSFHKSEIPNHLTFDSTKLRGSINKMIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKVNELLVVEYYSR 189 >gi|63191803|gb|AAY34861.1| small ribosomal protein subunit 4 [Erythrophyllopsis fuscula] Length = 199 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 NNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|294790790|ref|ZP_06755948.1| ribosomal protein S4 [Scardovia inopinata F0304] gi|294458687|gb|EFG27040.1| ribosomal protein S4 [Scardovia inopinata F0304] Length = 208 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K + ++ ++ R +G L + + R YGPG HG+ R+ S + ++LR KQ++ Sbjct: 1 MTKIQRARRQVRLSRSLGIALTPKAQRLFEKRPYGPGEHGRDRRRAESDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ISEK+ R++++ A R+ G T ++ LE+RLD +V R+ F T ARQFV H Sbjct: 61 RAQYG-ISEKQLRAVYERATRAAGQTGTSMQVQLETRLDALVLRSGFARTTAQARQFVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174 RH+LV+G V+ SYR K G I+VK KS+ + A++ RD VP Y+ V + Sbjct: 120 RHILVDGNIVDRPSYRVKPGQTIQVKPKSQTMEPFQAAAEGVHRDVLPQVPGYLDVTLPS 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + AT R+P + PV + VVE+Y+R Sbjct: 180 LKATLTRLPEVEE---IPVQVNIQYVVEYYAR 208 >gi|293634029|gb|ADE60394.1| ribosomal protein subunit 4 [Pogonatum campylocarpon] gi|293634043|gb|ADE60401.1| ribosomal protein subunit 4 [Pogonatum microstomum] Length = 195 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|83416508|gb|ABC18274.1| small ribosomal subunit protein 4 [Breutelia chrysocoma] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|237739946|ref|ZP_04570427.1| SSU ribosomal protein S4P [Fusobacterium sp. 2_1_31] gi|294782962|ref|ZP_06748288.1| ribosomal protein S4 [Fusobacterium sp. 1_1_41FAA] gi|229421963|gb|EEO37010.1| SSU ribosomal protein S4P [Fusobacterium sp. 2_1_31] gi|294481603|gb|EFG29378.1| ribosomal protein S4 [Fusobacterium sp. 1_1_41FAA] Length = 195 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + R P KP+ + +QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYAIQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI S+R K GDV+ V + SK + + A + A P ++ ++ + Sbjct: 115 IAVNGRRVNIASFRVKVGDVVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|63078573|gb|AAY29373.1| ribosomal protein S4 [Eucladium verticillatum] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKTPHLKFSST---NQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVSIPSYRCKPQDFISIKDRQKSQIMITKNVDFSQKSKIPNHLTFNSIEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|154508868|ref|ZP_02044510.1| hypothetical protein ACTODO_01379 [Actinomyces odontolyticus ATCC 17982] gi|293192678|ref|ZP_06609632.1| ribosomal protein S4 [Actinomyces odontolyticus F0309] gi|153798502|gb|EDN80922.1| hypothetical protein ACTODO_01379 [Actinomyces odontolyticus ATCC 17982] gi|292820185|gb|EFF79182.1| ribosomal protein S4 [Actinomyces odontolyticus F0309] Length = 207 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 1 MSKRESSK-HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M+ S K + R +G L + R YGPG HG+ R+ + S + ++L+ KQ+++ Sbjct: 1 MATNRSRKQVRESRALGLALTPKAVRYFEKRPYGPGEHGRTRRRQDSDYAVRLKEKQRLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E + R F+EA R+ G T NL+ LE RLD++V RA F TI ARQFV HR Sbjct: 61 AQYG-IRESQLRRAFEEARRTAGLTGENLVELLEMRLDSLVLRAGFARTIQQARQFVVHR 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNM 175 H+LV+G+ V+ S+R K G ++VK KS+ A++ RD VPEY+ V + Sbjct: 120 HILVDGKIVDRPSFRVKPGQTLQVKPKSQTTVPFEIAAEGIHRDVLPAVPEYLDVELSRL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT VR P + PV + +VVE YSR Sbjct: 180 KATLVRRPKRAE---VPVTVDVQMVVEHYSR 207 >gi|63101037|gb|AAY33143.1| small ribosomal protein 4 [Cyptodon muelleri] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K S+ ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGILPGLTNKISQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|157689432|gb|ABV65272.1| ribosomal protein S4 [Bursera simaruba] Length = 194 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+ K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLEALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + K A + + ++P+++++ +I S Sbjct: 116 VDIPSYRCKPRDIITARDDQKSRALIQNYLDSSHHEELPKHLTLQAFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|67035694|gb|AAY62778.1| small ribosomal protein subunit 4 [Ptychomitriopsis aloinoides] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 +I RR+G K+ + + S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPXVRIIRRLGALPGLTNKTQLKSSS----INQSTSNKKISQYRIRLEEKQKLRFHYG-I 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN Sbjct: 56 TERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNN 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K A V++ +++ VP +++ N +I Sbjct: 116 RIVNIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI-- 173 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 -LDHKSIGLKINELLVVEYYSR 194 >gi|78369639|gb|ABB43049.1| ribosomal protein 4 [Calymperes dozyanum] Length = 199 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A +++G T L+ FLE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKTKGSTGQILLQFLEMRLDNIIFRLGIAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY+CK D I +K + K +++ + + + +P +++ N +I Sbjct: 117 NNRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTNFSPKYKIPSHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|291320521|ref|YP_003515785.1| 30S ribosomal protein S4 [Mycoplasma agalactiae] gi|290752856|emb|CBH40831.1| 30S ribosomal protein S4 [Mycoplasma agalactiae] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 11/206 (5%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 + K RR G ++ K S R+Y PG HG +R K S +GL L KQK++ Sbjct: 2 RYLGPVFKKARRYGISILENEKEFSKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKVRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+ + I+ A + +G NL+ LESR D +VYRA F T ARQ V H H Sbjct: 61 IYG-ISEKQLQKIYARAIKMKGVAGTNLLQLLESRFDNVVYRAGFATTRRQARQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +NG++ +I S GDVI +K K++ V A + + +++V N A Sbjct: 120 FQLNGKNADIPSMHISVGDVITLKAKTQNNNQVKAALES--KPAAAWLTV--KNFEAKVD 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + ++ N V+E YS+ Sbjct: 176 RLPDRSE---LNPNVKENFVIEHYSK 198 >gi|37548847|gb|AAO32692.1| ribosomal protein 4 [Oligotrichum austroaligerum] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 KI RR+G K+ Y ++ K S + ++L KQK++ +YG I Sbjct: 1 GP-CKIIRRLGALPGLTNKTLQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-I 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN Sbjct: 56 TERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVND 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + + A + +++ +P +++ N +I Sbjct: 116 RIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI-- 173 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 -LDRESIGLKINELLVVEYYSR 194 >gi|12642244|gb|AAK00204.1| rps4 [Lorentziella imbricata] Length = 194 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ VP +++ N +I L Sbjct: 117 DIPSYRCKPQDFITMKDRQKSQAMITKNIDFFQKSKVPNHLTFNSLQKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|283549376|dbj|BAI66350.1| small ribosomal protein 4 [Mizutania riccardioides] Length = 194 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+G L G K + ++S +K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKVIRRLGA-LPGSTKKILESKSSSIDRSTSSKK--VSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A + +G T + LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRLARKFKGSTGQVSLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+ VK + + +L+ L + +VP +++ + + + Sbjct: 117 ISINEDIVDIPSYNCEPGDITTVKGTERSQSIILKNINLFPKSEVPSHLTFDPIKLWGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLV 200 ++ + + + LV Sbjct: 177 NQMINR---EWIDLKINELLV 194 >gi|12642246|gb|AAK00205.1| rps4 [Lorentziella imbricata] Length = 195 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V Sbjct: 58 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVNDCIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ VP +++ N +I L Sbjct: 118 DIPSYRCKPQDFITMKDRQKSQAMITKNIDFFQKSKVPNHLTFNSLQKKGLVNQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIGLKINELLVVEYYSR 193 >gi|67035781|gb|AAY62821.1| small ribosomal protein subunit 4 [Cryphaea patens] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P +++ + I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNXI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|222103422|gb|ACM44240.1| small ribosomal protein subunit 4 [Brothera leana] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+ + + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNY 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K V + + +++ VP +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LNKESIGLKINELLVVEYYSR 194 >gi|21914146|gb|AAM81295.1| ribosomal protein subunit 4 [Anomobryum conicum] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NRIVNIPSYRCKPEDSITIKDRPKSQAIISKNLNLYQKYKTPNHLTYNFLKKNGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|63191815|gb|AAY34867.1| small ribosomal protein subunit 4 [Pseudocrossidium aureum] Length = 199 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNPSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITINDRKKSQIMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|37992681|gb|AAR06519.1| small ribosomal protein 4 [Squamidium leucotrichum] Length = 199 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D + +K + K + + + ++ +P +++ +I Sbjct: 117 NECIVDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|46486552|gb|AAS98712.1| ribosomal protein subunit 4 [Braithwaitea sulcata] Length = 199 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGILPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 II-ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ + +I Sbjct: 117 NDRIVDIPSYRCKPQDFITIKNRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|299144486|ref|ZP_07037565.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517574|gb|EFI41314.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 106/206 (51%), Gaps = 10/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K RR+G N+ G PK+ R K + +G QL KQ+++ Sbjct: 1 MAKMMVPRFKQSRRLGLNVCGHPKAMKRATKGT-----ARSDKKLTEYGKQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F ++FKEA +S+ T L+ FLE RLD + YR F +I ARQ V H H Sbjct: 56 YYGVL-EKQFVNLFKEAKKSKEQTGPALVQFLERRLDNLAYRMGFASSIRQARQMVTHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ VNI SYRC GDVI + + ++ + YI D AT V Sbjct: 115 ITVNGKKVNIPSYRCSAGDVIALSARGRKAELFKTNYETNYVTSYPYIKKEED-FKATLV 173 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ PV + L+VEFYS+ Sbjct: 174 SLPNR---EDIPVEIDDQLIVEFYSK 196 >gi|29422383|gb|AAO84587.1| small ribosomal protein 4 [Plagiopus oederianus] Length = 199 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRXHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 NDRMVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + LVVE+YSR Sbjct: 177 ---LDRESIGLKTNELLVVEYYSR 197 >gi|50954758|ref|YP_062046.1| 30S ribosomal protein S4 [Leifsonia xyli subsp. xyli str. CTCB07] gi|61215514|sp|Q6AFA4|RS4_LEIXX RecName: Full=30S ribosomal protein S4 gi|50951240|gb|AAT88941.1| 30S ribosomal protein S4 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 207 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 82/208 (39%), Positives = 114/208 (54%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS R SK + R +G L + + R Y PG HG+ ++ S + ++LR KQ+++ Sbjct: 1 MSSRSRSKTRESRALGIALTPKAARYMEKRPYAPGEHGRTKRKADSDYAVRLREKQRLRA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+ R F+EA R++G T NL+ LE RLD +V RA F TI ARQFV HRH Sbjct: 61 QYG-ILEKQLRIAFEEARRTQGLTGENLVEILEMRLDALVLRAGFARTISQARQFVVHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMV 176 +LV+G+ V+ S+R K G I VK +S+ A+ DV P Y+SV D + Sbjct: 120 ILVDGKLVDRPSFRVKPGQTIGVKARSEGTEPFQVAAAGGHVDVLPKTPAYLSVELDKLQ 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 A R P + PV + LVVE+Y Sbjct: 180 ARLERRPKRAE---VPVTCEVQLVVEYY 204 >gi|18920775|gb|AAL82432.1| ribosomal protein system 4 [Plagiothecium nemorale] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + + ++ +P +++ N+ +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|85001771|gb|ABC68423.1| small ribosomal protein 4 [Goniomitrium seroi] gi|85001773|gb|ABC68424.1| small ribosomal protein 4 [Goniomitrium seroi] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGVLPGLSNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A R++G T L+ LE RLD +V+R PTI ARQ VNHRHVLVN Sbjct: 57 ERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + +++ VP +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNRQKSQAIITKNINFSQKYKVPNHLTFDSVQKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|118626027|emb|CAL41741.1| small ribosomal protein 4 [Anastrophyllum minutum var. weberi] Length = 191 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIS 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|46486568|gb|AAS98720.1| ribosomal protein subunit 4 [Racopilum cuspidigerum] Length = 200 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G K+P S ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K + K A + ++ +P +++ + + Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDRQKSQAITSKNIDFYQKYKIPNHLTYSSLEKKRFVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198 >gi|11878072|gb|AAG40784.1| small ribosomal protein 4 [Sphagnum cuspidatum] gi|20531047|gb|AAM27348.1| ribosomal protein 4 [Sphagnum cuspidatum] Length = 192 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 ILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI Sbjct: 57 LKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 117 PSYRCKPQDFITIKDRQKSQAIITRSMDDSRGYKTPNHLTLDSSQKKGSVNQIIDR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|39546761|gb|AAR28107.1| small ribosomal protein 4 [Polytrichadelphus purpureus] Length = 195 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 7/199 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P Y +K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSGYINQQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN V Sbjct: 58 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A ++ +++ +P +++ N +I L Sbjct: 118 NIPSYRCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIGLKINELLVVEYYSR 193 >gi|63191775|gb|AAY34847.1| small ribosomal protein subunit 4 [Oligotrichum parallelum] Length = 194 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P Y G +K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSGYI-NQAGSNKK--ISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 57 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDQQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|46811002|gb|AAT01819.1| small ribosomal protein 4 [Fossombronia angulosa] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G + Y L ++ S+ + ++L KQK++ +YG + Sbjct: 1 GPRAKMIRRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ Sbjct: 57 TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDD 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +VNI SY CK GDVI V+ + K + + ++ L ++ P +++++ + + + Sbjct: 117 DTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLLQKPKTPNHLTLDSTRLRGSINQTID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RD---WINLKINELLVVEYYSR 195 >gi|23504383|emb|CAC81062.1| small ribosomal protein 4 [Dendrocyathophorum decolyi] Length = 198 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ +NH+H+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHKHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + +L ++ +P ++ N +I Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQRKSEAIINKNIELYQKYKIPNHLIYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|548864|sp|P36454|RR4_DENGI RecName: Full=30S ribosomal protein S4, chloroplastic gi|439934|emb|CAA82434.1| ribosomal protein S4 [Dendrocalamus giganteus] gi|6002057|emb|CAA58935.1| ribosomal protein S4 [Gigantochloa verticillata] Length = 196 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVN R V+I S+RCK D+I K + V + ++ +P++++++ Sbjct: 116 ILVNRRIVDIPSFRCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + LVVE+ Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196 >gi|116010533|emb|CAL38870.1| ribosomal protein S4 [Saxifraga rotundifolia] Length = 194 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR G K P G L Q R K + + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRTGALPGLTSKRP----RPGSDLRNQPRSGKRTQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK DVI K + K + + + +VP+Y++++ +I + Sbjct: 116 VDIPSYRCKPRDVITAKDEQKSKTLIQNSLDSSPHEEVPKYLTLHPFQYKGVVNQIIDNK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|46811006|gb|AAT01821.1| small ribosomal protein 4 [Fossombronia sp. Stotler & Crandall-Stotler 3940] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+G L G + RS +K + ++L KQK++ +YG + Sbjct: 1 GPRAKMIRRLGV-LPGLTDRIIEPRSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ Sbjct: 57 TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDD 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 +VNI SY CK GDVI V+ + K + + ++ L ++ P +++++ + + + Sbjct: 117 DTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDLTRLRGSINQTID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RD---WIDLKINELLVVEYYSR 195 >gi|42556508|gb|AAS19849.1| small ribosomal protein 4 [Triandrophyllum subtrifidum] Length = 191 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGVLPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHIAINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGSINQAINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|78369635|gb|ABB43047.1| ribosomal protein 4 [Calymperes lonchophyllum] Length = 198 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A +++G T L+ LE RLD I++R VPTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIVPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SY+CK D I +K K +++ + + +P +++ N +I Sbjct: 117 NCIVNIPSYQCKPEDCITIKDPQKYQTMIVKNINFSPKYKIPSHLTFNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|116513812|ref|YP_812718.1| ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093127|gb|ABJ58280.1| SSU ribosomal protein S4P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 185 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 6/185 (3%) Query: 23 PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82 + RSY PG HG + + S +G+QL+ KQK++ +G ++E++FR++F A + R Sbjct: 4 TGKELARRSYIPGQHGPNHRGRLSEYGMQLQEKQKLRWMFG-LNERQFRTLFARAGKIRE 62 Query: 83 -DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 N + LE RLD +VYR T ARQ VNH H+ V+G+ V+I SY K G I Sbjct: 63 GQHGTNFMILLERRLDNVVYRLGLATTREQARQLVNHGHITVDGKRVDIPSYEVKVGQTI 122 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201 +K+KSK L V +A + A P ++S + D M VR P + P + LVV Sbjct: 123 SLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQLVRFPERDEMEP---EIDEALVV 178 Query: 202 EFYSR 206 E+Y++ Sbjct: 179 EYYNK 183 >gi|67035937|gb|AAY62895.1| small ribosomal protein subunit 4 [Alsia californica] Length = 198 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + +L ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|302336354|ref|YP_003801561.1| SSU ribosomal protein S4P [Olsenella uli DSM 7084] gi|301320194|gb|ADK68681.1| SSU ribosomal protein S4P [Olsenella uli DSM 7084] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R++ + V + +RR+ + S +G+QLR KQK K Sbjct: 1 MAIDRTPVLKRCRQLDIDP------IVMGINKKSKREIRRRRRQESEYGIQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +++A + G NL+S LE+RLD +V+R F T ARQ V H H Sbjct: 55 IYGVL-EKQFRGYYEKAMKRDGIAGDNLMSILETRLDNVVFRLGFARTRKEARQTVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + VNGR V+I SY+ K GDV+ V K+K L + EA +E VP ++ V+ + + T Sbjct: 114 ITVNGRRVDIPSYQVKAGDVVAVAPKAKDLLPIKEALISSEHMAVPAWLEVDIEKLQGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P + + + L+VE YS+ Sbjct: 174 LQTPVRDQ---IDLDIDAQLIVELYSK 197 >gi|184200995|ref|YP_001855202.1| 30S ribosomal protein S4 [Kocuria rhizophila DC2201] gi|183581225|dbj|BAG29696.1| 30S ribosomal protein S4 [Kocuria rhizophila DC2201] Length = 212 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 + R +G L + + R Y PG HG+ R+ + S + ++L KQ+++ Y +I EK Sbjct: 13 VRKSRALGIALTPKAEKYFERRPYAPGEHGRARRKQDSDYKVRLTEKQRLRAQY-NIREK 71 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + EA R G T NLI+ LE+RLD +V RA FV T+ AARQ V HRH++V+G+ V Sbjct: 72 QMHRAYVEAKRVEGQTGENLIALLETRLDALVLRAGFVRTMAAARQAVVHRHIMVDGQRV 131 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATFVRIPS 184 + SYR + G +I V +S+++ A+ A +DV P Y+ V D + AT R P Sbjct: 132 DRPSYRVRPGQMIHVHPRSEKMVPFQIAATGANQDVLPDTPPYLDVTIDRLQATLSRKPE 191 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + LVVE+Y+R Sbjct: 192 RSE---VPVTCEEQLVVEYYAR 210 >gi|21914142|gb|AAM81293.1| ribosomal protein subunit 4 [Acidodontium ramicola] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGLAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPS 184 R +NI SYRCK D I +K + K + + L + P +++ + +I Sbjct: 117 RIINIPSYRCKPEDSITIKDRQKSQTIISKNLNLYPKYKTPNHLTYDLKEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|47606882|gb|AAT36361.1| ribosomal protein subunit 4 [Ancistrodes genuflexa] Length = 199 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRLRIIRRLGFLPGLSNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + E+R D I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVSLQLPETRSDNIIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEAIIGKNIEFYQKYKIPNHLTYNLLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197 >gi|222103528|gb|ACM44293.1| small ribosomal protein subunit 4 [Brachythecium plumosum] Length = 203 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 6 RGPRVRIIRRLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 61 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 62 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 121 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 122 DCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI- 180 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 --LDRESIGLKINELLVVEYYSR 201 >gi|256832586|ref|YP_003161313.1| 30S ribosomal protein S4 [Jonesia denitrificans DSM 20603] gi|256686117|gb|ACV09010.1| ribosomal protein S4 [Jonesia denitrificans DSM 20603] Length = 208 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS S+ ++ R +G L + R Y PG HG+ R+ S + ++LR KQ++ Sbjct: 1 MSSVTRSRRQVRLSRALGLALTPKAVKHFEKRPYAPGEHGRSRRRTESDYAVRLREKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + Y + EK+ R+ + +A G T ++ LE+RLD +V RA F TI ARQ V H Sbjct: 61 RAQYA-LREKQMRAAYDKARHLDGLTGETMVELLETRLDALVLRAGFARTILQARQAVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174 RH+LV+G+ V+ S+R K G I+VK K + A+ A RD VP Y+ V + Sbjct: 120 RHILVDGKLVDRPSFRVKPGQTIQVKPKMQAATPYQVAAAGAHRDVLPEVPGYLDVQLEK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A R P+ + PV + NLVVE+Y+R Sbjct: 180 LTAVLTRKPARAE---IPVQCEVNLVVEYYAR 208 >gi|67035642|gb|AAY62752.1| small ribosomal protein subunit 4 [Dichodontium pellucidum] Length = 190 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTSKTTKLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ +++ VP++++ N +I L Sbjct: 117 YRCKPQDFITIKNQQKSQAMIMKNLDFSQKYKVPDHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|80974152|gb|ABB53769.1| small ribosomal subunit protein 4 [Garovaglia plicata] Length = 199 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T + LE RLD I++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK DVI VK + + + ++ +P +++ +I Sbjct: 117 NDCIVNIPSYRCKPQDVIIVKNEKNSEGVINKDEDFHQKYKIPNHLTYIFLEKKGLVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197 >gi|311693294|gb|ADP96167.1| 30S ribosomal protein S4 [marine bacterium HP15] Length = 167 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 69/172 (40%), Positives = 103/172 (59%), Gaps = 6/172 (3%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 +HG RR Y G+QLR KQK+++ YG + EK+FR+ +KEA R +G T NL+ LE R Sbjct: 1 MHGARRGRLSEY-GVQLREKQKVRRIYGVL-EKQFRNYYKEAARGKGATGENLLQLLEGR 58 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +VYR F T ARQ V+H+ +LVN ++VNI SY+ + GDV+ V++K+K V Sbjct: 59 LDNVVYRMGFGSTRAEARQLVSHKAILVNDKTVNIPSYQVRPGDVVSVREKAKNQLRVRG 118 Query: 156 ASQLAERDVP-EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A L+ P ++ V+ + M + +P + P + NL+VE YS+ Sbjct: 119 ALDLSASRAPVSWVEVDANKMSGVYKSVPERTE---LPADINENLIVELYSK 167 >gi|296119325|ref|ZP_06837893.1| ribosomal protein S4 [Corynebacterium ammoniagenes DSM 20306] gi|295967717|gb|EFG80974.1| ribosomal protein S4 [Corynebacterium ammoniagenes DSM 20306] Length = 178 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 101/182 (55%), Gaps = 6/182 (3%) Query: 26 PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 R Y PG G+ R + Y LQL+ KQK K YG + E++FR + EA+R G T Sbjct: 2 AFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKYTYGVL-ERQFRRYYVEANRQPGKTG 59 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 NL+ LESRLD +VYRA T ARQ V+H H VNG+ N+ SY+ + D+I++++ Sbjct: 60 DNLVVLLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKTNVPSYQVSQYDIIDIRE 119 Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +S+++ EA L E VP ++ V + + ++P + V +Q L+VE Y Sbjct: 120 RSQKMEWFEEAQDRLGEAVVPAWLQVVPETLRILVHQLPERAQ---IDVPLQEQLIVELY 176 Query: 205 SR 206 S+ Sbjct: 177 SK 178 >gi|283549378|dbj|BAI66351.1| small ribosomal protein 4 [Mizutania riccardioides] Length = 194 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+G +L G K + ++S +K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKVIRRLG-DLPGSTKKILESKSSSIDRSTSSKK--VSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A + +G T + LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVRLARKFKGSTGQVSLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+ VK + + +L+ L + +VP +++ + + + Sbjct: 117 ISINEDIVDIPSYNCEPGDITTVKGTERSQSIILKNINLFPKSEVPSHLTFDPIKLWGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLV 200 ++ + + + LV Sbjct: 177 NKMINR---EWIDLKINELLV 194 >gi|92417461|gb|ABE76826.1| ribosomal protein subunit 4 [Cryphaea heteromalla] Length = 198 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRELIGLKINELLVVEYYSR 196 >gi|63078648|gb|AAY29410.1| ribosomal protein S4 [Oxystegus tenuirostris] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQELIGLKINELLVVEYYSR 195 >gi|37992643|gb|AAR06500.1| small ribosomal protein 4 [Philophyllum tenuifolium] Length = 199 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + + + + + + ++ +P +++ N +I Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNQRQSESIISKNIEFYQKIKIPNHLTYNFLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 LDRD---SIGLKINELLVVEYYSR 197 >gi|291548010|emb|CBL21118.1| SSU ribosomal protein S4P [Ruminococcus sp. SR1/5] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + +TR +R K S +GLQL+ KQK K Sbjct: 1 MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKVSEYGLQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +K+ADR +G T NL+ LESRLD IV+R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYKKADRMQGQTGENLMVMLESRLDNIVFRMGFARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY CK GD IE+++KSK ++ R VPE+I V+ +N+ Sbjct: 114 VLVNGKCVNIPSYLCKAGDTIEIREKSKGSERYKGILEITGGRLVPEWIDVDQENLKGVV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KELPTREQ---IDVPVNEMLIVELYSK 197 >gi|28194781|gb|AAO33652.1|AF481007_1 ribosomal protein S4 [Crossidium seriatum] gi|28194783|gb|AAO33653.1|AF481008_1 ribosomal protein S4 [Crossidium seriatum] gi|28194791|gb|AAO33657.1|AF481012_1 ribosomal protein S4 [Tortula muralis] gi|28194795|gb|AAO33659.1|AF481014_1 ribosomal protein S4 [Tortula israelis] gi|28194797|gb|AAO33660.1|AF481015_1 ribosomal protein S4 [Tortula muralis] gi|28194801|gb|AAO33662.1|AF481017_1 ribosomal protein S4 [Tortula muralis var. obcordata] gi|28194803|gb|AAO33663.1|AF481018_1 ribosomal protein S4 [Tortula muralis] gi|28194805|gb|AAO33664.1|AF481019_1 ribosomal protein S4 [Tortula muralis] gi|28194807|gb|AAO33665.1|AF481020_1 ribosomal protein S4 [Tortula muralis] gi|28194809|gb|AAO33666.1|AF481021_1 ribosomal protein S4 [Tortula muralis] gi|28194811|gb|AAO33667.1|AF481022_1 ribosomal protein S4 [Tortula muralis] gi|28194813|gb|AAO33668.1|AF481023_1 ribosomal protein S4 [Tortula muralis] gi|28194823|gb|AAO33673.1|AF481028_1 ribosomal protein S4 [Tortula muralis] gi|28194825|gb|AAO33674.1|AF481029_1 ribosomal protein S4 [Tortula muralis] gi|28194843|gb|AAO33683.1|AF481038_1 ribosomal protein S4 [Tortula israelis] gi|28194845|gb|AAO33684.1|AF481039_1 ribosomal protein S4 [Tortula muralis] gi|28194847|gb|AAO33685.1|AF481040_1 ribosomal protein S4 [Tortula muralis var. aestiva] gi|28194849|gb|AAO33686.1|AF481041_1 ribosomal protein S4 [Tortula muralis] Length = 196 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|37960577|gb|AAP70658.1| small ribosomal protein 4 [Sphagnum aongstroemii] Length = 195 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P + SY ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTSKIPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|21914174|gb|AAM81309.1| ribosomal protein subunit 4 [Plagiobryum uliginosum] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 RIVNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|291456658|ref|ZP_06596048.1| ribosomal protein S4 [Bifidobacterium breve DSM 20213] gi|291381935|gb|EFE89453.1| ribosomal protein S4 [Bifidobacterium breve DSM 20213] Length = 208 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + + R Y PG HG+ R+ S + +++R KQ+++ YG ISEK Sbjct: 11 VRLSRALGIALTPKAQRIFEKRPYAPGEHGRDRRRTESDYAVRMREKQRLRAQYG-ISEK 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R+ +++A R+ G T + +++ LE+RLD +V RA T ARQFV HRH+LV+G V Sbjct: 70 QLRAAYEKATRTAGQTGNAMLTDLETRLDNLVLRAGIARTTAQARQFVVHRHILVDGNVV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SYR K G I+VK KS+ + A++ RD VP Y+ VN ++ AT R P Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV + VVEFY+R Sbjct: 190 VEE---IPVQVNIQYVVEFYAR 208 >gi|42556400|gb|AAS19795.1| small ribosomal protein 4 [Blepharostoma trichophyllum] Length = 191 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINTDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I V+ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITVRNKQKSQSLITKNINLFQKLKIPSHLTFDSTKLQGSINQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLNINELLVVEYYSR 189 >gi|29422371|gb|AAO84581.1| small ribosomal protein 4 [Breutelia chrysea] Length = 199 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 10/205 (4%) Query: 4 RESSKHKIDRRIGENLWGRPKSP-VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + +I RR+G K+P +N S P K S + ++L KQK++ +Y Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLNLSSINP----STSNKKISQYRIRLEEKQKLRFHY 56 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 57 G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 115 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN R V+I SYRCK D I +K + K A + + ++ +P +++ N + Sbjct: 116 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENXXLVXQ 175 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 176 I---LDRESIGLKINELLVVEYYSR 197 >gi|20531111|gb|AAM27376.1| ribosomal protein 4 [Encalypta streptocarpa] Length = 191 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGILPGLTNKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +V+R PTI ARQ VNHRH+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNECIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ VP ++S + +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIIKNIDFSQKFKVPNHLSFDTLQKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|42556406|gb|AAS19798.1| small ribosomal protein 4 [Chaetophyllopsis whiteleggei] Length = 191 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISMNNNTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K + + + L ++ +P +++ + + + + Sbjct: 117 SYNCEPGDIITIRNGQKSQSIITKNLNLFQKSKIPSHLTFDLTRLXGFVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|28194715|gb|AAO33619.1|AF480974_1 ribosomal protein S4 [Scopelophila cataractae] Length = 196 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SY CK D I +K + K A + + ++ +P +++ N +I Sbjct: 117 LVNIPSYCCKPQDFITIKDRQKSQALITKHIDFYQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|29422363|gb|AAO84577.1| small ribosomal protein 4 [Bartramia mathewsii] Length = 199 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGALPGLTNKPPQLKSSS---INQSXSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRC D I +K + K A + + ++ ++P +++ +I Sbjct: 117 NDRIVDIPSYRCXPHDFITIKDRPKSXAIISKNIDFYQKYEIPNHLTYGSSENKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLXINEXLVVEYYSR 197 >gi|254302865|ref|ZP_04970223.1| ribosomal protein S4 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323057|gb|EDK88307.1| ribosomal protein S4 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 195 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + R P KP+ + QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI S+R K GDV+ V + SK + + A + A P ++ ++ + Sbjct: 115 IAVNGRRVNIASFRVKVGDVVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|67035702|gb|AAY62782.1| small ribosomal protein subunit 4 [Grimmia plagiopodia] gi|77019165|emb|CAH60188.1| chloroplast 30S ribosomal protein S4 [Grimmia elatior] gi|77019179|emb|CAH60195.1| chloroplast 30S ribosomal protein S4 [Grimmia laevigata] Length = 195 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DHESIGLKINELLVVEYYSR 193 >gi|3098170|gb|AAC15533.1| small ribosomal protein 4 [Brachymenium pulchrum] Length = 199 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + + RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRKKRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|118626053|emb|CAL39335.1| small ribosomal protein 4 [Adelanthus lindenbergianus] Length = 191 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ G++I +K K K + + + L + +P +++ + + + + Sbjct: 117 SYNCEPGNIITIKNKQKSQSIITKNINLFQNLKIPSHLTFDSIQLRGFVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|49182768|gb|AAT57846.1| small ribosomal protein [Nowellia curvifolia] Length = 195 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + +Y + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGILPGLSNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISMNNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SY C+ GD+I ++ K + + + + L ++ P +++ N + + ++ + Sbjct: 117 IDIPSYNCQPGDIITIRNKLESRSMITKNINLFQKLKTPSHLTFNLTELQGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|63191841|gb|AAY34880.1| small ribosomal protein subunit 4 [Didymodon rigidulus] Length = 199 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 NNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|18920743|gb|AAL82416.1| ribosomal protein system 4 [Herzogiella striatella] Length = 194 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|328541054|gb|AEB21751.1| ribosomal protein S4 [Lembidium longifolium] Length = 195 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K Y K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE R D ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +++K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ESIDLKINELLVVEYYSR 193 >gi|293634033|gb|ADE60396.1| ribosomal protein subunit 4 [Pogonatum cirratum] Length = 193 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 KIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VN Sbjct: 57 LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 IPSYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|49182738|gb|AAT57831.1| small ribosomal protein [Lejeunea cladogyna] Length = 192 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K L K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTE 53 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ +N Sbjct: 54 RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFSLGMAPTIPNARQLVNHRHIFINDCI 113 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDSTKLQGLVNQTIRR- 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 --EWIDLKINELLVVEYYSR 190 >gi|3914853|sp|O20234|RR4_IRIEN RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292909|emb|CAA92555.1| ribosomal protein S4 [Iris ensata] Length = 194 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYR K D+I K + A + ++P +++++ +I S Sbjct: 116 VDILSYRSKPRDIITTKDNQRSKALIQNYLAWSPHEELPNHLTMDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|63078646|gb|AAY29409.1| ribosomal protein S4 [Oxystegus tenuirostris] Length = 197 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 175 -VDQELIGLKINELLVVEYYSR 195 >gi|75858242|gb|ABA28695.1| small ribosomal protein 4 [Syzygiella geminifolia] Length = 191 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNGVVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD++ + K K + + + + L ++ +P +++ + + ++ + Sbjct: 117 SYNCEPGDILTTRNKQKSQSIITKNTNLFQKVKIPSHLTFDLIQLRGFVNQMVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|309322234|ref|YP_003934312.1| ribosomal protein S4 [Monsonia speciosa] gi|197131488|gb|ACH47262.1| ribosomal protein S4 [Monsonia speciosa] gi|300069327|gb|ADJ66447.1| ribosomal protein S4 [Monsonia speciosa] Length = 208 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS---PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57 MS + K R+G +S N++S + R K S + ++L KQ+ Sbjct: 1 MSHYRGPRFKKISRLGALPGLTKRSRIPKKNSKSNSRSIKPPRSSRKKSQYRIRLEEKQR 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 ++ +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VN Sbjct: 61 LRFHYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPRARQLVN 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMV 176 HRH+LVNG V+I SYRCK D+I ++K K A + A R +P++++ + Sbjct: 120 HRHILVNGHVVDIPSYRCKPRDIITAREKEKSRALIQNYLDAAPRKALPKHLTTHRRQYK 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 180 GLVNQIIDR---EWVGLKINEFLVVEYYSR 206 >gi|293634031|gb|ADE60395.1| ribosomal protein subunit 4 [Pogonatum cirratum] Length = 193 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 KIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VN Sbjct: 57 LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D+I +K + + A + + +++ +P +++ N + +I L Sbjct: 117 IPSYRCKPQDLITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLDKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|118626003|emb|CAL41739.1| small ribosomal protein 4 [Lethocolea congesta] Length = 191 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKALKPKSSY---IDHSTSNKKVSQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D I++R PTI ARQ VNH H+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRPDNIIFRLXMAPTIPGARQLVNHGHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GDVI VK K K + ++ L +R VP +++ + + + + + Sbjct: 117 SYSCQPGDVISVKNKQKSQSMIIRNINLFQRLKVPGHLTFDSAELQGSVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|78369623|gb|ABB43041.1| ribosomal protein 4 [Calymperes tahitense] Length = 199 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---NNQLLSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+L+ Sbjct: 58 -LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY+CK D I +K + K +++ + + +P +++ N +I Sbjct: 117 NNRIVNIPSYQCKPQDFITIKDQQKYQKIMVKNVNFSPKYKIPSHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + L+VE+YSR Sbjct: 177 ---LDQESIGLKINELLIVEYYSR 197 >gi|20531105|gb|AAM27373.1| ribosomal protein 4 [Dicranoweisia cirrata] Length = 192 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 LNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LNQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|298346856|ref|YP_003719543.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 43063] gi|298236917|gb|ADI68049.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 43063] Length = 199 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + K R YGPG HG+ R+ S + ++L+ KQ+++ Y I E Sbjct: 2 VRLSRALGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRAQYA-IREA 60 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + F+EA R G T NL+ LE RLD +V RA F T+F ARQ V HRH+LV+G+ V Sbjct: 61 QLVKTFQEARRMEGQTGDNLVELLEMRLDALVLRAGFGRTMFQARQAVTHRHILVDGKIV 120 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + SY+ + G ++VK S+ + A++ + RD VP+Y+ V+ + + T R P Sbjct: 121 DRPSYKVRPGQTVQVKPTSQVKDPFVVAARGSHRDVLPPVPDYLKVDLEKLRFTLERKPK 180 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + P+ + LVVE YSR Sbjct: 181 REE---VPIQCEVQLVVEHYSR 199 >gi|28194851|gb|AAO33687.1|AF481042_1 ribosomal protein S4 [Tortula vahliana] Length = 196 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGALPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|66866205|gb|AAY57776.1| small ribosomal protein 4 [Aulacomnium heterostichum] Length = 207 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 13/210 (6%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I RR+G K+P + S + K S + ++L QK++ +Y Sbjct: 3 RYRGPRVRIIRRLGALPGLTNKTPQSKSSS---IDQSTSNKKISQYRIRLEENQKLRFHY 59 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+L Sbjct: 60 G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE------RDVPEYISVNHDNMV 176 VN R V+I SYRCK D I +K + + A + +P +++ + Sbjct: 119 VNDRIVDIPSYRCKPQDFITIKDRQESEAIIXXXXXXKNIYFYQKYKIPNHLTYSSLEKK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 179 GLVNQI---LDRESIGLKINELLVVEYYSR 205 >gi|222103458|gb|ACM44258.1| small ribosomal protein subunit 4 [Pleurozium schreberi] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L LE RLD +++R PTI ARQ VNH H+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|77019143|emb|CAH60177.1| chloroplast 30S ribosomal protein S4 [Codriophorus aciculare] Length = 195 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DHESIGLKINELLVVEYYSR 193 >gi|293634039|gb|ADE60399.1| ribosomal protein subunit 4 [Pogonatum japonicum] Length = 195 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R Sbjct: 57 RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|28194787|gb|AAO33655.1|AF481010_1 ribosomal protein S4 [Crossidium seriatum] Length = 196 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLK---PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMISKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|20531066|gb|AAM27355.1| ribosomal protein 4 [Pogonatum perichaetiale] Length = 195 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R+ Sbjct: 57 RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|20531064|gb|AAM27354.1| ribosomal protein 4 [Polytrichadelphus aristatus] Length = 192 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ Q K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPXXKSGY---INQQTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R+ G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 LNYVRXARRAXGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A ++ +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIDLKINELLVVEYYSR 190 >gi|315604259|ref|ZP_07879325.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 180 str. F0310] gi|315313965|gb|EFU62016.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 180 str. F0310] Length = 207 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 9/211 (4%) Query: 1 MSKRESSK-HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M+ S K + R +G L + R YGPG HG+ R+ + S + ++L+ KQ+++ Sbjct: 1 MATNRSRKQVRESRALGLALTPKAVRYFEKRPYGPGEHGRTRRRQDSDYAVRLKEKQRLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E + R F+EA R+ G T NL+ LE RLD +V RA F TI ARQ V HR Sbjct: 61 AQYG-IRESQLRRAFEEARRTAGLTGENLVELLEMRLDALVLRAGFSRTIQQARQVVVHR 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNM 175 H+LV+G+ V+ S+R K G I+VK KS+ A++ RD VPEY+ V+ + Sbjct: 120 HILVDGKIVDRPSFRVKPGQTIQVKPKSQTTVPFEIAAEGIHRDVLPAVPEYLDVDLARL 179 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT VR P + PV + +VVE YSR Sbjct: 180 KATLVRRPKRAE---VPVTVDVQMVVEHYSR 207 >gi|254519679|ref|ZP_05131735.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA] gi|226913428|gb|EEH98629.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K RR+G N++G PK +N G R K S +G++L KQ+++ Sbjct: 1 MARERGPRFKQSRRLGLNVYGHPK-AMNRAVKGT----SRADKKLSEYGVRLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG + EK+F+ ++A +++ T L+ LESRLD +VYR F +I AARQ VNH Sbjct: 56 YYGVL-EKQFKKYVEDAFKTKEGTTGEALLLRLESRLDNLVYRIGFANSIRAARQMVNHG 114 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+LV+G+ ++I SY+ + G I + +K+++ + + +P YI N D A + Sbjct: 115 HILVDGKKIDIPSYKVEPGTEISLTEKARKSPNYISNINGHVNTLP-YIDSNLDEFKAVY 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + P+ + NL+VEFYSR Sbjct: 174 TRYPLREE---IPIQINENLIVEFYSR 197 >gi|28194701|gb|AAO33612.1|AF480967_1 ribosomal protein S4 [Hymenostylium recurvirostre] Length = 196 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|42556478|gb|AAS19834.1| small ribosomal protein 4 [Pedinophyllum truncatum] Length = 191 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNGIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD I ++ K + + + + + L ++ +P +++ + + + + Sbjct: 117 SYNCEPGDTITIRNKQRSQSIITKNTNLFQKIKIPSHLTFDLTQLRGFVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|222103518|gb|ACM44288.1| small ribosomal protein subunit 4 [Hylocomium splendens] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 YIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|18920787|gb|AAL82438.1| ribosomal protein system 4 [Rhizofabronia perpilosa] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + + + + ++ +P +++ + +I Sbjct: 117 FIVDIPSYRCKPQDFITIKNQRNSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|59803313|gb|AAX07765.1| Rps4 [Pellia endiviifolia] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+ SY ++ K S + ++L KQK++ +YG ++E+ Sbjct: 4 CKIIRRLGALPGLTSKTLKLESSY---INQSTPNKKISQYRIRLEEKQKLRFHYG-LTER 59 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD ++R PTI ARQ VNH H+++N +V Sbjct: 60 QLLKYVRIARKTKGSTGEVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHGHIVINDYTV 119 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY C+ DVI +K ++K + + + + +P +++ + + + Sbjct: 120 DIPSYNCEPRDVITIKNRNKSQSLITKNMDSFRKQKIPNHLTFDFTKFRGSVNKTIDR-- 177 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 -ECIDLKINELLVVEYYSR 195 >gi|3098230|gb|AAC15563.1| small ribosomal protein 4 [Brachythecium rutabulum] gi|222103546|gb|ACM44302.1| small ribosomal protein subunit 4 [Brachythecium rutabulum] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|63191645|gb|AAY34784.1| small ribosomal protein subunit 4 [Matteria gracillima] Length = 202 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 5 RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 60 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 61 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 120 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K + + ++ +P ++ N +I Sbjct: 121 HRIVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI- 179 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 180 --LDRELIGLKINELLVVEYYSR 200 >gi|222103520|gb|ACM44289.1| small ribosomal protein subunit 4 [Polytrichum juniperinum] Length = 196 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E Sbjct: 2 RVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R Sbjct: 58 RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + A + ++ +P +++ N +I L Sbjct: 118 VNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---L 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 DRESINLKINELLVVEYYSR 194 >gi|222103488|gb|ACM44273.1| small ribosomal protein subunit 4 [Polytrichum sphaerothecium] Length = 196 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E Sbjct: 2 RVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN Sbjct: 58 RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDCI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + + +++ +P +++ N +I L Sbjct: 118 VNIPSYRCKPQDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 DRESISLKINELLVVEYYSR 194 >gi|238809857|dbj|BAH69647.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 216 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 + K RR G ++ K S R+Y PG HG +R K S +GL L KQK+K Sbjct: 20 RYRGPVFKKSRRYGFSILETGKEFSKGRKRTYAPGQHGDKR-VKLSDYGLHLYEKQKVKY 78 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++EK+ + A + +G T L+ LESRLD +VYRA F T ARQ V+H H Sbjct: 79 LYG-LNEKQMHKYYIRATKIKGVTGTVLLQLLESRLDNLVYRAGFASTRRQARQLVSHGH 137 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +NG +I S + G I++K+KS++ + L +R +++++ ++ Sbjct: 138 FTLNGHKADIPSMNVEVGSKIQLKEKSQKNKIIEAN--LKDRSAAKWLTI--KGFEVSYD 193 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P ++ N +VEFYS+ Sbjct: 194 RLPDRSELHP---EIKENFIVEFYSK 216 >gi|157689416|gb|ABV65264.1| ribosomal protein S4 [Atuna racemosa] Length = 193 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTRKRP----RAVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T L+ +E RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVCIAAKAKGSTGQVLLQLIEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I VK + K A + A+ ++P++++ + +I S Sbjct: 116 DIPSYRCKPRDIITVKDEQKSRAMIQNHLDSSAQEELPKHLTFHPFQHKGLVNQIIDSK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WIGLKINELLVVEYYSR 191 >gi|62287269|sp|Q6H9L5|RR4_EQUBO RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927193|emb|CAE47532.1| small ribosomal protein 4 [Equisetum bogotense] Length = 207 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ NL G V ++ Q + K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLKIIRRLR-NLPGLTNKLVESKKNQASGSDQSIQKKVSQYCIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R VPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V++ S+ CK D+I + + + + + A+ +P+++++ Sbjct: 119 ILVNDRIVDVPSFHCKPKDIITIGAPKIYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|63078624|gb|AAY29398.1| ribosomal protein S4 [Tortella fragilis] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K P S + K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|63191817|gb|AAY34868.1| small ribosomal protein subunit 4 [Rhexophyllum subnigrum] Length = 199 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P R + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKIP---RLKSSSTNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 NNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|258591342|emb|CBE67641.1| 30S ribosomal subunit protein S4 [NC10 bacterium 'Dutch sediment'] Length = 192 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 6/183 (3%) Query: 25 SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 + R+Y PG+HGQ R++K S + QLR KQKM++ YG + E +FR F+ A++ G T Sbjct: 15 CAIEKRNYAPGMHGQ-RRAKVSDYCKQLREKQKMRRIYGVL-ETQFRKYFRLAEQQTGMT 72 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 NL+ LE RLD++V+R F + AR + H H+LVNGR +I SYR ++G+ IEV+ Sbjct: 73 GENLVRILEQRLDSVVHRLGFAASRAQARLLITHGHILVNGRKTDIASYRVRQGETIEVR 132 Query: 145 QKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 KS+++ ++ A + + R +P ++ ++ NM T IPS + + ++ L+V Sbjct: 133 PKSREMTAIKTALEGVKRRTLPSWLELDATNMKGTVRSIPSREE---IAIPVEEQLIVAL 189 Query: 204 YSR 206 YS+ Sbjct: 190 YSK 192 >gi|75858232|gb|ABA28690.1| small ribosomal protein 4 [Gyrothyra underwoodiana] Length = 191 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKILKSKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVYIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I VK K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDPVELQGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|315652327|ref|ZP_07905319.1| 30S ribosomal protein S4 [Eubacterium saburreum DSM 3986] gi|315485450|gb|EFU75840.1| 30S ribosomal protein S4 [Eubacterium saburreum DSM 3986] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + R +R K S +G+QLR KQK K Sbjct: 1 MAINRVPVLKRCRSLGLEPGFLGIDKKSNRDT------KRANRKLSEYGMQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A+R +G NL+ LE RLD +V+R T RQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKAERMKGQVGENLMILLERRLDNVVFRMGLGRTRKETRQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+K+K+K A E + A R VP +I + +N+ T Sbjct: 114 VLVNGKCVNIPSYLVKPGDVIEIKEKAKSSARYKEVVESTAGRIVPAWIDADLENLKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KSLPTREE---IDVPVDELLIVELYSK 197 >gi|80974146|gb|ABB53766.1| small ribosomal subunit protein 4 [Garovaglia angustifolia] Length = 202 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T + LE RLD I++R PTI R VNH H Sbjct: 58 HYG-ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPXXRXLVNHXH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN VNI SYRCK DVI VK + + + ++ +P +++ Sbjct: 117 ILVNDXIVNIPSYRCKPQDVIIVKNEKNSEGVINKDEDFHQKYKIPNHLTYIFLEKKGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205 +I L + + LVVE+YS Sbjct: 177 SKI---LDRESIGLKINELLVVEYYS 199 >gi|67035606|gb|AAY62734.1| small ribosomal protein subunit 4 [Garckea phascoides] Length = 199 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSXSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGXAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K + + + +++ VP ++ N +I Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQXMITKNAXFSQKYKVPNHLXFNFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIXLKINELLVVEYYSR 197 >gi|63191843|gb|AAY34881.1| small ribosomal protein subunit 4 [Tridontium tasmanicum] Length = 199 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRHVLV Sbjct: 58 -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVLV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 NNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNIDFSQKSKIPNHLTFNSLEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|11467476|ref|NP_043622.1| ribosomal protein S4 [Odontella sinensis] gi|1350894|sp|P49492|RR4_ODOSI RecName: Full=30S ribosomal protein S4, chloroplastic gi|1185171|emb|CAA91654.1| 30S ribosomal protein S4 [Odontella sinensis] Length = 206 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 11/211 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR----KSKPSYFGLQLRAKQ 56 MS+ K +I RR+G K + PG HG+ K + +G++L KQ Sbjct: 1 MSRYRGPKLRITRRLGALPGLTQKQS--KKKGRPGQHGKSNEADNSKKTTEYGIRLEEKQ 58 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+K YG ++E + KEA R +G T L+ LE RLDTI + F PTI +ARQ V Sbjct: 59 KLKFNYG-LTESQLYRYIKEARRRKGVTGLILLQLLEMRLDTICFTLGFAPTIASARQLV 117 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175 NH H+ VN V+I S++C+ DVI +K K+ V Q + + D+P ++ + Sbjct: 118 NHGHITVNDNVVSIPSFQCQINDVIGIKPKATSKNLVEGNLQTIKQVDLPTHLKFDKSKQ 177 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT + + + + V+E+YSR Sbjct: 178 EATVINYCDRNELLLNLDELL---VIEYYSR 205 >gi|49182744|gb|AAT57834.1| small ribosomal protein [Lepidolaena sp. Engel 23052] Length = 195 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGTLPGLTSKKLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ +N + Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISINNET 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ + K + + + + ++P ++++N + + Sbjct: 117 VDIPSYNCEPGDIITIRNREKSQSIITKNINSFHKSEIPNHLTLNSTQLRGSINTTIHR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ECIDLKVNELLVVEYYSR 193 >gi|63101093|gb|AAY33171.1| small ribosomal protein 4 [Desmotheca apiculata] Length = 197 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K K + + ++ +P ++ N +I Sbjct: 117 RIVDIPSYRCKPLDFITIKDGRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRELIGLKINELLVVEYYSR 195 >gi|19704619|ref|NP_604181.1| 30S ribosomal protein S4 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296329034|ref|ZP_06871540.1| 30S ribosomal protein S4 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|26399398|sp|Q8RE43|RS4_FUSNN RecName: Full=30S ribosomal protein S4 gi|19714919|gb|AAL95480.1| SSU ribosomal protein S4P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153838|gb|EFG94650.1| 30S ribosomal protein S4 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 195 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + R P KP+ + QLR KQK K Sbjct: 1 MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI S+R K GD++ V + SK + + A + A P ++ ++ + Sbjct: 115 IAVNGRRVNIASFRVKVGDIVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|269308862|gb|ACZ34322.1| ribosomal protein small subunit 4 [Oedipodiella australis] Length = 195 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R TI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMALTIPEARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|313678349|ref|YP_004056089.1| 30S ribosomal protein S4 [Mycoplasma bovis PG45] gi|312950635|gb|ADR25230.1| ribosomal protein S4 [Mycoplasma bovis PG45] Length = 198 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 11/206 (5%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 + K RR G ++ K S R+Y PG HG +R K S +GL L KQK++ Sbjct: 2 RYLGPVFKKARRYGISILENEKEFSKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKVRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+ + I+ A + +G NL+ LESR D +VYRA F T ARQ V H H Sbjct: 61 IYG-ISEKQLQKIYSRAIKMKGVAGTNLLQLLESRFDNVVYRAGFATTRRQARQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +NG++ +I S GDVI +K K++ A V A + + +++V N Sbjct: 120 FQLNGKNADIPSMHISVGDVITLKAKTQNNAQVKAALES--KPAAAWLTV--KNFEVKVD 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + ++ N V+E YS+ Sbjct: 176 RLPDRSE---LNPNVKENFVIEHYSK 198 >gi|75858236|gb|ABA28692.1| small ribosomal protein 4 [Plagiochilion conjugatum] Length = 191 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNH+H+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHKHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|63191671|gb|AAY34797.1| small ribosomal protein subunit 4 [Pylaisia polyantha] Length = 199 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGXLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKXKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VBI SYRCK D I +K + K + + + ++ P +++ + +I Sbjct: 117 NDCIVBIPSYRCKPQDFITIKNQRKSEXIINKNIEFYQKSKXPNHLTYSXLXKKGLVXQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|42556410|gb|AAS19800.1| small ribosomal protein 4 [Chiloscyphus cuspidatus] gi|227345125|gb|ACP28115.1| small ribosomal protein 4 [Chiloscyphus novae-zeelandiae var. grandistipulus] Length = 191 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|118626039|emb|CAL41745.1| small ribosomal protein 4 [Anastrophyllum saxicola] Length = 191 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNNTVDIS 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLXGSINQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|293634059|gb|ADE60409.1| ribosomal protein subunit 4 [Pogonatum urnigerum] Length = 194 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 57 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|46811028|gb|AAT01832.1| small ribosomal protein 4 [Metzgeria conjugata] Length = 197 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 107/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 TERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINK 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I +K + + + ++E ++ +P ++ + ++ + R+ + Sbjct: 117 DIVDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSVNRMIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWIDLKINELLVVEYYSR 195 >gi|42556520|gb|AAS19855.1| small ribosomal protein 4 [Zoopsis argentea] Length = 191 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISMNDNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 SYNCEPGDIIMIRDKQKSQSMITKNINLFQNLKIPSHLTFDSTKLCGSINQTINR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IHLKINELLVVEYYSR 189 >gi|116010493|emb|CAL37353.1| ribosomal protein S4 [Vinca major] Length = 194 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RLKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMATTIPTARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K A + ++ ++P ++ + +I S Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRALIQKSLDSYPHGELPSHLILQPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WVGLKINELLVVEYYSR 192 >gi|37960615|gb|AAP70677.1| small ribosomal protein 4 [Sphagnum tenerum] Length = 195 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + Y + K S + + L KQK++ +YG I+E+ Sbjct: 2 VRIXRRLGVLPGLTSKTPQSKSXY---IXQPISNKKVSQYRIXLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|67035562|gb|AAY62712.1| small ribosomal protein subunit 4 [Pseudephemerum nitidum] Length = 194 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMISKNIDFSQKSKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|150390763|ref|YP_001320812.1| 30S ribosomal protein S4 [Alkaliphilus metalliredigens QYMF] gi|172052482|sp|A6TSI5|RS4B_ALKMQ RecName: Full=30S ribosomal protein S4 B gi|149950625|gb|ABR49153.1| RNA-binding S4 domain protein [Alkaliphilus metalliredigens QYMF] Length = 199 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K RR+G N+ G PK+ + G +RK +G+QL KQ+++ Sbjct: 1 MARMRQPRFKTCRRLGINVCGHPKAM---KRADNGQVRDKRKLSS--YGIQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY ++ EK+F+ K A + T ++LI LE RLD +VYR F +I ARQ V H H Sbjct: 56 YY-EVMEKQFKIYVKAAIKDSETTGNSLIKKLECRLDNLVYRTGFGSSIRQARQMVVHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+ S+ GD I +++KS++ ++ YI+ N + Sbjct: 115 ILVNGKKVDRPSFAVSVGDDISLREKSRKNKIFIDNFLRNVDFSYPYIAKNEAGFSGQLI 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + +LVVEFYS+ Sbjct: 175 RMPERHE---APIEVNDHLVVEFYSK 197 >gi|148377824|ref|YP_001256700.1| 30S ribosomal protein S4 [Mycoplasma agalactiae PG2] gi|148291870|emb|CAL59261.1| 30S ribosomal protein S4 [Mycoplasma agalactiae PG2] Length = 198 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 11/206 (5%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 + K RR G ++ K S R+Y PG HG +R K S +GL L KQK++ Sbjct: 2 RYLGPVFKKARRYGISILENEKEFSKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKVRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISEK+ + I+ A + +G NL+ LESR D +VYRA F T ARQ V H H Sbjct: 61 IYG-ISEKQLQKIYARAIKMKGVAGTNLLQLLESRFDNVVYRAGFATTRRQARQLVAHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +NG++ +I S GDVI +K K++ V A + + +++V N A Sbjct: 120 FQLNGKNADIPSMHISVGDVITLKAKTQNNNQVKAALES--KPAAAWLTV--KNFEAKVD 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ + ++ N V+E YS+ Sbjct: 176 RLPNRSE---LNPNVKENFVIEHYSK 198 >gi|28194785|gb|AAO33654.1|AF481009_1 ribosomal protein S4 [Tortula brevissima] Length = 196 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMISKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|63191779|gb|AAY34849.1| small ribosomal protein subunit 4 [Dawsonia superba] Length = 195 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R Sbjct: 57 RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|28194815|gb|AAO33669.1|AF481024_1 ribosomal protein S4 [Tortula muralis] gi|28194817|gb|AAO33670.1|AF481025_1 ribosomal protein S4 [Tortula muralis] gi|28194819|gb|AAO33671.1|AF481026_1 ribosomal protein S4 [Tortula muralis] gi|28194821|gb|AAO33672.1|AF481027_1 ribosomal protein S4 [Tortula muralis] Length = 196 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGILPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|157689502|gb|ABV65307.1| ribosomal protein S4 [Ixerba brexioides] Length = 197 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 11/203 (5%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++ Sbjct: 1 PRFKKIRRLGALPGLTNKRP----KAGSNLRNQSRSVKKSQYRIRLEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD I +R TI ARQ VNHRH+LVNG Sbjct: 56 ERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIFFRLGMASTIPQARQLVNHRHILVNGH 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D+I + + K A + + ++ +++++ +I Sbjct: 116 IVDIPSYRCKPRDIITARDEQKSRALIQNYLDSSFHFHEELTKHLTLYPSQYKGLVNQII 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 DSK---WVGLKINELLVVEYYSR 195 >gi|7109205|gb|AAF36678.1| ribosomal protein 4 [Timmia megapolitana] Length = 194 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNDHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|253580647|ref|ZP_04857911.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848018|gb|EES75984.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 197 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + +TR +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK F + + +ADR G T NL+ LESRLD +V+R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFHNYYDKADRMPGQTGANLMILLESRLDNVVFRMGFARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GD IE+++KSK + R VPE+I V+ +N+ T Sbjct: 114 VLVNGKCVNIPSYLVKAGDQIEIREKSKGSERYKGILEVTGGRLVPEWIDVDQENLKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPNR---EAIDVPVNEMLIVELYSK 197 >gi|157689522|gb|ABV65317.1| ribosomal protein S4 [Morella cerifera] Length = 189 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G + P G L Q R SK S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGALPGLTSRRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I S Sbjct: 56 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I + + K + + + R ++P++++++ +I S Sbjct: 116 YRCKPQDIITARDEQKSIVLIQNYLDSSPREELPKHLTLHPFQYKGLVNQIVDSK---WV 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|28194793|gb|AAO33658.1|AF481013_1 ribosomal protein S4 [Pottia intermedia] Length = 196 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + ++ K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|75858222|gb|ABA28685.1| small ribosomal protein 4 [Adelanthus bisetulus] Length = 191 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTFKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ G++I +K K K + + L + +P +++ + ++ +I + Sbjct: 117 SYNCEPGNIITIKNKRKSQLIITKNINLFQNLKIPSHLTFDSIQLLGFVNQIVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|92417465|gb|ABE76828.1| ribosomal protein subunit 4 [Jaegerina scariosa] Length = 197 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K P ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 VNI SY+CK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 CIVNIPSYQCKSQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LNRESIDLKINELLVVEYYSR 195 >gi|42556514|gb|AAS19852.1| small ribosomal protein 4 [Tritomaria quinquedentata] Length = 190 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 YNCEPGDIITIRNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSVNQTVNR---EWV 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NLKINELLVVEYYSR 188 >gi|320120610|gb|EFE29196.2| 30S ribosomal protein S4 [Filifactor alocis ATCC 35896] Length = 218 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 14/205 (6%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++ + K+ RR G N+ PK+ G + K S +G QL KQK+K Y Sbjct: 28 ARPRGPRFKVARRFGVNVCAHPKALK---------RGATQVRKQSDYGKQLNEKQKLKAY 78 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 Y + EK+F + + A ++G+ NL+ LE RLD +VYR F T+ ARQ V H H+ Sbjct: 79 YD-MQEKQFANWVEAAMSAKGNAGENLVQRLECRLDNLVYRLGFGSTLRQARQMVVHHHI 137 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181 LVNG+ V+ SY K GDVI ++++S+ + + + + ++ Y+ + +N+ V Sbjct: 138 LVNGKRVDRPSYEVKVGDVISLRERSQSIDTFKNNFKESLCNL-SYLQKDENNLSGKLVA 196 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS + P+ + +L++E+YS+ Sbjct: 197 LPSREE---VPIEVTDSLIIEYYSK 218 >gi|42556408|gb|AAS19799.1| small ribosomal protein 4 [Chandonanthus sp. He-Nygren 492] Length = 191 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISVNNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYSCESGDIITIRNKQKSQSIITKNINLFQKSKIPSHLTFDLTQLRGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|18920797|gb|AAL82443.1| ribosomal protein system 4 [Taxiphyllum wissgrillii] Length = 197 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 ++I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 CILDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|75858234|gb|ABA28691.1| small ribosomal protein 4 [Nardia compressa] Length = 191 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|28194855|gb|AAO33689.1|AF481044_1 ribosomal protein S4 [Eucladium verticillatum] Length = 196 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRQKSQIMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|49182686|gb|AAT57805.1| small ribosomal protein [Cephalozia catenulata] Length = 195 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + +Y + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGVLPGLTSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISMNNDM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SY C+ GD+I ++ K K + V + L ++ +P +++ + + + ++ + Sbjct: 117 IDIPSYNCEPGDIITIRNKEKSKSLVTKNINLFQKLKMPSHLTFDPIQLQGSVNQMVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EGVNLKINELLVVEYYSR 193 >gi|67035881|gb|AAY62867.1| small ribosomal protein subunit 4 [Clastobryum tenuirameum] Length = 200 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 8/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + +I R+G K+P ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVRIICRLGTLPGLTNKTPQLESGS---INQSTSNKKISQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L Sbjct: 58 G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 VN V+I SYRCK D I +K + K + + + ++ +P ++ + + Sbjct: 117 VNDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLIYSSLEKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 IVDR---ESIGLKINELLVVEYYSR 198 >gi|77019139|emb|CAH60176.1| chloroplast 30S ribosomal protein S4 [Grimmia cribrosa] Length = 195 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKTKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRV 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A +++ ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFPQKYKIPNHLTFNSLENKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DHEAIGLKINELLVVEYYSR 193 >gi|291542058|emb|CBL15168.1| SSU ribosomal protein S4P [Ruminococcus bromii L2-63] Length = 200 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K R +G + G K N G + + K S + +QL KQK+ Sbjct: 1 MAKNMQPIAKRCRALGISPAVMGYSKKTSNRNP------GGKMRRKKSEYSMQLTEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I EK+FR+ +++A+++ G T L++ +E RLD +++R T ARQ V+H Sbjct: 55 KFIYG-IMEKQFRAYYEKAEKAEGKTGAVLLTLIERRLDNVIFRLGLAATRREARQLVSH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV--PEYISVNHDNMV 176 H VNG+ VNI SY K GDVIEVK+KS+ A ++ + P+++ N + + Sbjct: 114 SHFTVNGKKVNIPSYLVKVGDVIEVKEKSRSTARFKAIAEGETSSIVTPKWLEKNENLLG 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P +D+ +PV + +L+VE YS+ Sbjct: 174 GKVVAAPQR-EDIDFPV--EEHLIVELYSK 200 >gi|293634035|gb|ADE60397.1| ribosomal protein subunit 4 [Pogonatum convolutum] Length = 192 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 LNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNQQKSQAIIAKNIDFSQKYKIPNHLTFNSLKKKGLVNQI---LNRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|37992437|gb|AAR06397.1| small ribosomal protein 4 [Callicostella diatomophila] Length = 198 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPCVKIIRRLGVLPGLTNKIPELKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ +NHRH+LVN Sbjct: 57 ITEQQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQIL 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 DRD---SIGLKINELLVVEYYSR 196 >gi|157785982|gb|ABV74165.1| small ribosomal protein 4 [Hypopterygium didictyon] Length = 197 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG Sbjct: 57 TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNG 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 YIVDIPSYRCKPQDFINIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LNRESIGLKINELLVVEYYSR 195 >gi|83940947|gb|ABC48870.1| rps4 [Sinojackia oblongicapra] Length = 193 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G K P+ G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 3 KIRRLGALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I Sbjct: 58 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D+I + + K A + + + ++P+++++ +I S Sbjct: 118 PSYRCKPRDIITARDEQKSRALIQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK--- 174 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 WIGLKINELLVVEYYSR 191 >gi|75858226|gb|ABA28687.1| small ribosomal protein 4 [Anthelia julacea] Length = 191 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ E RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I VK K K + + L ++ +P ++ + + + + Sbjct: 117 SYNCQPGDIITVKNKQKSQLIIAKNINLFQKLKIPSHLIFDFTELRGVVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|238916291|ref|YP_002929808.1| small subunit ribosomal protein S4 [Eubacterium eligens ATCC 27750] gi|259495278|sp|C4Z2V6|RS4_EUBE2 RecName: Full=30S ribosomal protein S4 gi|238871651|gb|ACR71361.1| small subunit ribosomal protein S4 [Eubacterium eligens ATCC 27750] Length = 197 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R + + + R + K S +G+QLR KQK K Sbjct: 1 MAVNRTPVLKRCRSLEMDPVYLGIDKKSRRKA------KNAGRKVSEYGMQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +K+A+R +G T NL+ LE RLD +++R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYKKAERQKGMTGENLMIMLELRLDNVLFRLGFARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+++KSK A E + R VPE++ + D + + Sbjct: 114 VLVNGKCVNIPSYLVKAGDVIEIREKSKSSARYKEILESTNGRLVPEWLEADADALKGSV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP+ V + L+VE YS+ Sbjct: 174 KSIPTR---EVIDVPVNEMLIVELYSK 197 >gi|75858230|gb|ABA28689.1| small ribosomal protein 4 [Delavayella serrata] Length = 191 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I VK K K + + + L ++ +P ++ + N+ + + + Sbjct: 117 SYNCEPGDIITVKNKQKSQSIITKNINLFQKSKIPSHLIFDSTNLSGSVNQTINR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|118626037|emb|CAL39331.1| small ribosomal protein 4 [Anastrophyllum minutum] Length = 191 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIS 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|67035740|gb|AAY62801.1| small ribosomal protein subunit 4 [Timmiella anomala] Length = 191 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D + +K + K A +++ + ++ VP +++ N +I L Sbjct: 117 SYRCKPQDFVTIKDRQKSQAIIIKNIEFFQKYKVPSHLTFNSLQKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|42556394|gb|AAS19792.1| small ribosomal protein 4 [Balantiopsis cancellata] Length = 191 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD I V+ + K + + + L +P +++ + + + + Sbjct: 117 SYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSTKLRGLVNQTINR---EL 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|63191743|gb|AAY34831.1| small ribosomal protein subunit 4 [Cryptopodium bartramioides] Length = 197 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGVLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKYQTIISKNIDFCQKYKIPHHLTYNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIALKINELLVVEYYSR 195 >gi|20531113|gb|AAM27377.1| ribosomal protein 4 [Grimmia laevigata] Length = 194 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HESIGLKINELLVVEYYSR 192 >gi|33413227|emb|CAD86749.1| ribosomal protein small subunit 4 [Oreoweisia erosa] Length = 191 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|152031676|sp|Q7UXM6|RS4_RHOBA RecName: Full=30S ribosomal protein S4 Length = 202 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K +I+RR+G L+ ++ R PG+H + R+ PS +G L KQK+ Sbjct: 1 MARYTGPKARINRRLGTMLYETAGAARAMDRRPQPPGMHTRGRR--PSNYGAALMEKQKI 58 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YYG + E++ R F+ R G+T L+ E RLD +V R F T ARQ + H Sbjct: 59 KHYYG-LGERQLRRYFENVGRKSGNTGELLLLMCERRLDNVVRRVGFTKTRPQARQGITH 117 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H VNG V Y + GD+IEV+ + + D +++S + + + AT Sbjct: 118 GHFRVNGVKVTKPGYMLRAGDLIEVRGRENLKNLYRGVIANSPPDGLDWVSFDSETLRAT 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ D+ PV VVEF SR Sbjct: 178 VLSLPGAV-DISLPVDANS--VVEFLSR 202 >gi|37960603|gb|AAP70671.1| small ribosomal protein 4 [Sphagnum recurvum] Length = 192 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 LLRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI Sbjct: 57 LKYVRIARRTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 117 PSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|296126890|ref|YP_003634142.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563] gi|296018706|gb|ADG71943.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563] Length = 208 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 12/213 (5%) Query: 1 MSKRESSKHKIDRRIGENL------WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + ++ RR L K + + PG ++ K Y G+Q+R Sbjct: 1 MARYRDASCRLCRREKMKLMLKGERCLTAKCAITKKREVPGPVNRKMKQLSEY-GIQMRE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK+K+ YG + EK+FR+ + EA R G + NL+ LE RLD +VYR F + ARQ Sbjct: 60 KQKVKRIYGVL-EKQFRNYYHEAIRVAGVSGENLLRLLELRLDNVVYRLGFAKSRNQARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173 FV H + VNG+ ++I SY K GD I + + V ++ + + VP ++S++ Sbjct: 119 FVAHGFISVNGKKMSIPSYSIKVGDKISFTENGNAIGEVKAIAEGLKSEYVPAWLSLDLS 178 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V +P + YP + L++E+YS+ Sbjct: 179 SKTGEIVTLPIR-DHIEYP--INEQLIIEYYSK 208 >gi|227541761|ref|ZP_03971810.1| 30S ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC 51866] gi|227182467|gb|EEI63439.1| 30S ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC 51866] Length = 178 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 6/182 (3%) Query: 26 PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 R Y PG G+ R + Y +QL+ KQK + YG I EK+F ++EA R +G T Sbjct: 2 AFERRPYPPGQAGRARIKESEYL-IQLQEKQKARFTYG-IMEKQFHRYYEEAARRKGKTG 59 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 NL+ LESRLD ++YRA T ARQ V H H LVNG NI S++ + D+I+VK+ Sbjct: 60 DNLVILLESRLDNVIYRAGLARTRRQARQLVTHGHFLVNGVKTNIPSFQVSQYDIIDVKE 119 Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 KS+++ EA L + VP ++ V + ++P + + +Q L+VEFY Sbjct: 120 KSRKMLWFEEAQDGLVDAVVPAWLQVVPSTLRILVHQLPERAQ---IDIPLQEQLIVEFY 176 Query: 205 SR 206 S+ Sbjct: 177 SK 178 >gi|49182673|gb|AAT57799.1| small ribosomal protein [Ascidiota blepharophylla subsp. alaskana] Length = 194 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI R +G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 2 KIIRXLGALPGFTGKTLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A ++G T L+ LE RLD ++ PTI ARQ VNH+H+ +N +V+ Sbjct: 58 LLKYVRIARNAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHKHISINNDTVD 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SY C+ GD+I +K K + + + ++ ++P +++ + + + ++ + Sbjct: 118 IPSYNCEPGDIIXIKNSGKSQSIITKNMNSFQKLEIPNHLTFDSTQLRGSVNQMINR--- 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 EWINLKVNELLVVEYYSR 192 >gi|15829187|ref|NP_326547.1| 30S ribosomal protein S4 [Mycoplasma pulmonis UAB CTIP] gi|26399464|sp|Q98PK6|RS4_MYCPU RecName: Full=30S ribosomal protein S4 gi|14090131|emb|CAC13889.1| 30S RIBOSOMAL PROTEIN S4 [Mycoplasma pulmonis] Length = 199 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ SS K RR+G ++ K R+Y PG HGQ R++K S +GL L KQK+ Sbjct: 1 MSRDRSSLFKKSRRLGFSVLENEKEFNKGKKRNYAPGQHGQ-RRTKLSDYGLHLYEKQKV 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG ++E++F + FK++ + +G N + FLE RLD +VYRA F T ARQFVNH Sbjct: 60 KNLYG-VNERQFANSFKKSSKLKGVQGTNFLQFLEQRLDNLVYRAGFAETRRQARQFVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 HVLV+G+ V+I SYR G VIE+K+K ++ A VL ++ R +++SV + AT Sbjct: 119 GHVLVDGKKVDIPSYRVAVGKVIEIKEKLQKNAQVLRNKEI--RTAADWLSV--KDFKAT 174 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F R+P + + + +L+VEFY++ Sbjct: 175 FTRLPERNEFLK---EVNDSLIVEFYNK 199 >gi|118626025|emb|CAL39329.1| small ribosomal protein 4 [Anastrophyllum minutum var. minutum] gi|118626049|emb|CAL39333.1| small ribosomal protein 4 [Anastrophyllum minutum] Length = 191 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + +Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIS 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|170784775|ref|YP_001718691.1| ribosomal protein S4 [Trachelium caeruleum] gi|156598820|gb|ABU85663.1| ribosomal protein S4 [Trachelium caeruleum] gi|157267523|gb|ABV26516.1| ribosomal protein S4 [Trachelium caeruleum] Length = 202 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 12/209 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +SP + R + K S + ++L KQK++ Sbjct: 1 MSRYRGPCFKKIRRLGALPGLTNRSPDDLRKKK-----KSGSVKKSQYRIRLEEKQKLRF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 56 HYG-LTERQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---AERDVPEYISVNHDNMVA 177 +LVNGR V+I SYRCK D I K K K A + + + VP ++++ Sbjct: 115 ILVNGRLVDIPSYRCKPRDTITAKDKQKSKALIKNSLDSLPQKKLKVPPHLTLKRRQYKG 174 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + + + VVE+YSR Sbjct: 175 LVNKIIDSQR---FGLEINELRVVEYYSR 200 >gi|37992473|gb|AAR06415.1| small ribosomal protein 4 [Cryptopapillaria penicillata] Length = 196 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|20531115|gb|AAM27378.1| ribosomal protein 4 [Leiomela bartramioides] Length = 194 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPRARQLVNHRHILVNDHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ ++P +++ N +I L Sbjct: 117 DIPSYRCKPHDFITIKDRQKSQTIISKNIDFYQKYEIPNHLTYNSSENKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|3098204|gb|AAC15550.1| small ribosomal protein 4 [Splachnum luteum] Length = 198 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K A + + + ++ +P ++ N +I Sbjct: 117 EHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQIL 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 DRQ---SIGLKINELLVVEYYSR 196 >gi|262038727|ref|ZP_06012087.1| ribosomal protein S4 [Leptotrichia goodfellowii F0264] gi|261747279|gb|EEY34758.1| ribosomal protein S4 [Leptotrichia goodfellowii F0264] Length = 195 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R+ P K + +G Q+R KQK + Sbjct: 1 MARDRQPVLKKCRNLGLDPSVLGVNKKSNRNIRP-----NANRKLTEYGTQMREKQKARF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F +++EA R G T L+ +LE RLD +VYR F T ARQ V+H H Sbjct: 56 VYG-VMEKQFYKLYEEATRKEGVTGELLLQYLERRLDNVVYRLGFGATRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L+NG+ VNI SYR K+GDVI +K+ S++LA + E+ ++ VP ++ ++ + A + Sbjct: 115 ILINGKRVNIASYRVKQGDVISIKENSRELALIKESV--GQKTVPGWLELDEAALTAKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + +++EFYSR Sbjct: 173 ENPGRD---SVDFEINEAMIIEFYSR 195 >gi|18920781|gb|AAL82435.1| ribosomal protein system 4 [Pseudotaxiphyllum elegans] Length = 197 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 58 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 LDRESIGLKINELLVVEYYSR 195 >gi|80974176|gb|ABB53781.1| small ribosomal subunit protein 4 [Ptychomnion falcatulum] Length = 197 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 VNI SYRCK D I +K + + + ++ +P +++ + +I Sbjct: 117 SIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNKI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|42556402|gb|AAS19796.1| small ribosomal protein 4 [Calypogeia integristipula] Length = 191 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R +G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I V++K K + + + + ++ +P +++ + + + + Sbjct: 117 SYNCEPGDIITVREKQKSQSIITKNINVFQKLKIPSHLTFDSTELRGFVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|37548867|gb|AAO32702.1| ribosomal protein 4 [Pogonatum pensilvanicum] Length = 192 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 2 IRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ VN V+I Sbjct: 58 KYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNSNLVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + + + +P +++ + D + + + + Sbjct: 118 SYDCEPGDIITIKNKQKSQSIISKNLBSFKKSKIPSHLTFDSDTIQGSVNQ---RVNREW 174 Query: 191 YPVIMQPNLVVEFYSR 206 +I+ LVVE+YSR Sbjct: 175 VNLIINELLVVEYYSR 190 >gi|77019199|emb|CAH60205.1| chloroplast 30S ribosomal protein S4 [Grimmia pulvinata] Length = 195 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + +++ +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DHESIGLKINELLVVEYYSR 193 >gi|32471308|ref|NP_864301.1| 30S ribosomal protein S4 [Rhodopirellula baltica SH 1] gi|32443149|emb|CAD71980.1| 30S ribosomal protein S4 [Rhodopirellula baltica SH 1] gi|327541734|gb|EGF28253.1| 30S ribosomal protein S4 [Rhodopirellula baltica WH47] Length = 206 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K +I+RR+G L+ ++ R PG+H + R+ PS +G L KQK+ Sbjct: 5 MARYTGPKARINRRLGTMLYETAGAARAMDRRPQPPGMHTRGRR--PSNYGAALMEKQKI 62 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YYG + E++ R F+ R G+T L+ E RLD +V R F T ARQ + H Sbjct: 63 KHYYG-LGERQLRRYFENVGRKSGNTGELLLLMCERRLDNVVRRVGFTKTRPQARQGITH 121 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H VNG V Y + GD+IEV+ + + D +++S + + + AT Sbjct: 122 GHFRVNGVKVTKPGYMLRAGDLIEVRGRENLKNLYRGVIANSPPDGLDWVSFDSETLRAT 181 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ D+ PV VVEF SR Sbjct: 182 VLSLPGAV-DISLPVDANS--VVEFLSR 206 >gi|255994833|ref|ZP_05427968.1| ribosomal protein S4 [Eubacterium saphenum ATCC 49989] gi|255993546|gb|EEU03635.1| ribosomal protein S4 [Eubacterium saphenum ATCC 49989] Length = 195 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 15/208 (7%) Query: 1 MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ S K R + + G K + Q K S + LQLR KQ+ Sbjct: 1 MAVDRSPVLKRCRSLDLDPVHIGTMKKSKRMK--------QGYGKKMSEYALQLREKQRA 52 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I EK+FR+ + +A R +G T N + LE RLD+IVYR F T ARQ V H Sbjct: 53 KFIYG-ILEKQFRNTYNKAARKKGITGENFLVMLEMRLDSIVYRMGFATTRREARQLVTH 111 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H LVNG+ +NI S K GDVI+VK KS E Q+ +PE++ V+ D + Sbjct: 112 GHFLVNGKKLNIPSAELKVGDVIKVKNKSVSSPKFEEIRQM-RVGIPEWLEVSKDKLEGK 170 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V IP+ + ++ +L+VEFYS+ Sbjct: 171 VVSIPTREQ---IDTPIEEHLIVEFYSK 195 >gi|146261579|gb|ABQ15099.1| ribosomal protein S4 [Peridiscus lucidus] Length = 191 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KIRRLGALPGLTSKRP----RTGSDLRKQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 56 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRIVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D+I + K A + + ++P++++++ +I S Sbjct: 116 PSYRCKPQDIITARDDQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK--- 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 WVNLKINELLVVEYYSR 189 >gi|78369617|gb|ABB43038.1| ribosomal protein 4 [Leucophanes octoblepharioides] Length = 199 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY+CK D I +K + K +++ + + +P +++ N +I Sbjct: 117 NNRIVNIPSYQCKSQDFITIKDQQKYQTMIVKNRSFSPKYKIPSHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|42794658|gb|AAS45726.1| Rps4 [Macleania bullata] Length = 211 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ L L + + VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRXRKRKRVPXHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|28572545|ref|NP_789325.1| 30S ribosomal protein S4 [Tropheryma whipplei TW08/27] gi|161486575|ref|NP_787506.2| 30S ribosomal protein S4 [Tropheryma whipplei str. Twist] gi|41017835|sp|Q83GC9|RS4_TROWT RecName: Full=30S ribosomal protein S4 gi|41017836|sp|Q83HV1|RS4_TROW8 RecName: Full=30S ribosomal protein S4 gi|28410677|emb|CAD67063.1| 30s ribosomal protein S4 [Tropheryma whipplei TW08/27] Length = 205 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 S+ ++ R +G L + + R Y PG HG+ R+ S + ++LR KQ+++ YG + Sbjct: 5 SRTRLSRALGVPLTPKAARLMEVRPYPPGQHGRFRRKGDSDYAVRLREKQRLRGQYG-LR 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+ S++ EA R +G NL+ LE RLD +V RA F +I ARQ V HRH+LV+G+ Sbjct: 64 EKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVVHRHILVDGK 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATFVRI 182 V+ SY G ++VK KS L A+ DV P YI + + + VR Sbjct: 124 LVDRPSYSVSPGQTVKVKPKSVPLDPFQVAASGGHADVLPPIPGYIEADLEGLSFRLVRR 183 Query: 183 PSSLKDVPYPVIMQPNLVVEFY 204 P + PV LVVE+Y Sbjct: 184 PKRSE---VPVTCNVQLVVEYY 202 >gi|254449317|ref|ZP_05062762.1| ribosomal protein S4 [gamma proteobacterium HTCC5015] gi|198261076|gb|EDY85376.1| ribosomal protein S4 [gamma proteobacterium HTCC5015] Length = 173 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 66/174 (37%), Positives = 106/174 (60%), Gaps = 6/174 (3%) Query: 34 PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93 PG Q R+ + S +GLQLR KQK+++ YG + E++FR+ +K A R +G T NL+ LE Sbjct: 5 PGQ-AQARRGRLSDYGLQLREKQKVRRIYGVL-ERQFRNYYKTAARQKGSTGENLLKLLE 62 Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD +VYR + T ARQ V+H+ +LVNG VN+ SY+ K GD ++V+++S Q + Sbjct: 63 CRLDNVVYRMGYGSTRAEARQLVSHKAILVNGAVVNVASYQVKAGDEVKVREQSAQQTRI 122 Query: 154 LEASQLAERDVP-EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +LA++ P E++ V+ + F +P P + +L+VE YS+ Sbjct: 123 QDSMELAQQRGPVEWMEVDTKKLSGVFKNVPDRSD---LPAEINESLIVELYSK 173 >gi|18920729|gb|AAL82409.1| ribosomal protein system 4 [Amblystegium fluviatile] Length = 197 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|63101095|gb|AAY33172.1| small ribosomal protein 4 [Cardotiella subappendiculata] Length = 197 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNH 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I +K + K + + ++ +P ++ N +I Sbjct: 117 RIVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLIYNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRELIGLKINELLVVEYYSR 195 >gi|157689456|gb|ABV65284.1| ribosomal protein S4 [Crossosoma californicum] Length = 193 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RSVSDLRNQARPVKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V Sbjct: 56 QLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I + + K + + ++P+++++ +I S Sbjct: 116 DIPSYRCKPQDIITARNEQKSRTLIKNYLDSSPHEELPKHLTLRPFQYKGLVNQIIDSK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVGLKINELLVVEYYSR 191 >gi|157887720|emb|CAM33382.1| ribosomal protein S4 [Leptodontium gemmascens] Length = 196 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P + + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + + +++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDCITINDRKKSQSIITKNIDFSQKSKIPHHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|157786002|gb|ABV74173.1| small ribosomal protein 4 [Lopidium concinnum] Length = 198 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 7/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G KS + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-I 57 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG Sbjct: 58 TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNG 117 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K K K + + + + ++ + +++ + +I Sbjct: 118 YIVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI-- 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 -LDRESIGLKINELLVVEYYSR 196 >gi|157785989|gb|ABV74168.1| small ribosomal protein 4 [Hypopterygium tamarisci] gi|157785991|gb|ABV74169.1| small ribosomal protein 4 [Hypopterygium tamarisci] Length = 197 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG Sbjct: 57 TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNG 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 YIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LNRESIGLKINELLVVEYYSR 195 >gi|83416506|gb|ABC18273.1| small ribosomal subunit protein 4 [Ctenidium molluscum] Length = 196 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|63078609|gb|AAY29391.1| ribosomal protein S4 [Pseudosymblepharis richardsii] Length = 197 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A + +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKVKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGIVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQELIGLKINELLVVEYYSR 195 >gi|28194717|gb|AAO33620.1|AF480975_1 ribosomal protein S4 [Cinclidotus fontinaloides] Length = 196 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + + +++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINDRQKSQVMITKNVEFSQKSKIPNHLTFNFLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|66990674|emb|CAI29115.1| small ribosomal protein 4 [Plagiochila colorans] Length = 195 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ + SY + K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY C+ G++I + K K + V + ++ +P +++ + + + ++ Sbjct: 117 NDIVDIPSYNCEPGNIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMI 176 Query: 184 SSLKDVPYPVIMQPNLVVEF 203 + + LVVE+ Sbjct: 177 DR---ESINLKINEXLVVEY 193 >gi|78369627|gb|ABB43043.1| ribosomal protein 4 [Calymperes robinsonii] Length = 199 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+ Sbjct: 58 -LTERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182 N R VNI SY+CK D I +K + K +++ + + +P +++ N +I Sbjct: 117 NNRIVNIPSYQCKPQDFITLKDQQKYQTMIVKNINVYPKYKIPSHLTFNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|28194709|gb|AAO33616.1|AF480971_1 ribosomal protein S4 [Phascum curvicolle] Length = 196 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P + + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSNST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|17025818|gb|AAL32076.1| ribosomal protein 4 [Syrrhopodon albovaginatus] gi|17025826|gb|AAL32080.1| ribosomal protein 4 [Syrrhopodon prolifer] Length = 199 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 KI RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPCVKIIRRLGTLSGLTNKTHQLKSSS---INQLTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRI 182 N R VNI SY+CK D I +K K +L+ ++ P ++ N +I Sbjct: 117 NNRIVNIPSYQCKPQDFITLKDHQKYQTRILKNINFFSKHKTPNHLIFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|121761732|gb|ABM64953.1| ribosomal protein S4 [Plagiomnium venustum] gi|121761783|gb|ABM64978.1| ribosomal protein S4 [Plagiomnium venustum] gi|121761789|gb|ABM64981.1| ribosomal protein S4 [Plagiomnium venustum] Length = 195 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|157689472|gb|ABV65292.1| ribosomal protein S4 [Eucryphia lucida] Length = 193 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RTGSDFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKCVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I K + K A + A ++ ++++++ +I S Sbjct: 116 DIPSYRCKPRDIITAKDEQKSRALIQNYLDSSAHEELSKHLTLHPVQYKGLVNQIIDSK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVGLKINELLVVEYYSR 191 >gi|12642240|gb|AAK00202.1| rps4 [Gigaspermum repens] Length = 194 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGVLPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T + LE RLD +++R TI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVSLQLLEMRLDNVIFRLGMALTIPEARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + +++ VP +++ N + L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQX---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|78369633|gb|ABB43046.1| ribosomal protein 4 [Calymperes motleyi] Length = 199 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKILRRLGTLSGLSNKTPPLK---ASSINQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY CK D I +K + K +++ + + P ++ N +I Sbjct: 117 NNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFPKYKTPNHLIFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|269122554|ref|YP_003310731.1| ribosomal protein S4 [Sebaldella termitidis ATCC 33386] gi|268616432|gb|ACZ10800.1| ribosomal protein S4 [Sebaldella termitidis ATCC 33386] Length = 195 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R P K + +G+QLR KQK + Sbjct: 1 MARDRQPVLKKCRTLGLDPSILGVNKKSKRGLRP-----NANKKLTDYGIQLREKQKARF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I EK+F +++EA R G T L+ +LE R D +VYR T ARQ V+H H Sbjct: 56 VYG-IMEKQFYKLYEEATRKEGVTGELLLQYLERRFDNVVYRLGLTTTRRQARQLVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +NG+ VNI SYR K+GDVI V++KS+ LA + E+ ++ VP +++++ + + A + Sbjct: 115 LEINGKRVNIASYRVKQGDVITVREKSRDLAIIKESLN--QKSVPGWLTLDENALSAKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ + +++EFYSR Sbjct: 173 ENPTR---EAVDFDINEAMIIEFYSR 195 >gi|18920795|gb|AAL82442.1| ribosomal protein system 4 [Taxiphyllum taxirameum] Length = 196 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P R ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTP---RLKSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + E + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIINENIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|67035654|gb|AAY62758.1| small ribosomal protein subunit 4 [Jonesiobryum cerradense] Length = 194 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGILPGLTNKISQLKSGS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K +++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQTMIIKNLDFSQKTKVPNHLTFNFSZKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|118625997|emb|CAL41736.1| small ribosomal protein 4 [Riccardia capensis] Length = 202 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G + P + S + K S + L+L KQK++ Sbjct: 1 MSRYRGPRTKIIRRLGTLPGLTSRIPKSRSSS---IDRSAANKKISQYRLRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++G T L+ LE RLD ++R VPTI AARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVCVAKKAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATF 179 VL+N VNI SY CK GD+I +K + + + + + + +P +++ + Sbjct: 117 VLINANMVNIPSYNCKTGDIITIKARERNRLKMGSDTISIQKTGIPNHLAFKSVEFSGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 177 NRIIDR---EGIDLKINELLVVEYYSR 200 >gi|227345129|gb|ACP28117.1| small ribosomal protein 4 [Chiloscyphus spinifer] Length = 191 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLSSKTLKPKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRDKDKSQSMITKNINLFQKLKIPSHLTFDSIKLQGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|170321467|gb|AAY62815.2| small ribosomal protein subunit 4 [Orthodontopsis bardunovii] Length = 203 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++ + +I RR+G K S ++ K S + ++L KQK++ + Sbjct: 3 ARYRGPRVRIIRRLGALPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFH 59 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNH+H+ Sbjct: 60 YG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMASTIPGARQLVNHKHI 118 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 LVN R V+I SYRCK D I +K + K A + + ++ +P +++ N Sbjct: 119 LVNDRIVDIPSYRCKPQDFITIKDRQKSQAIIDKNLDFYQKSKIPNHLTYNSLEKKGLVN 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + VE+YSR Sbjct: 179 QI---LXRESJGLKINELXXVEYYSR 201 >gi|24473808|gb|AAL82747.1| small ribosomal subunit protein 4 [Acidodontium sprucei] Length = 199 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPCVRIIRRLGALRGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 NDRIVNIPSYRCKPEDFITIKNRQKSQAIISKNLNLHQKYKTPNHLTYNFLKKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|28194697|gb|AAO33610.1|AF480965_1 ribosomal protein S4 [Pleurochaete squarrosa] gi|63078581|gb|AAY29377.1| ribosomal protein S4 [Pleurochaete luteola] gi|63078583|gb|AAY29378.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078603|gb|AAY29388.1| ribosomal protein S4 [Pleurochaete squarrosa] Length = 196 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|28194689|gb|AAO33606.1|AF480961_1 ribosomal protein S4 [Pottiopsis caespitosa] Length = 196 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---INQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|63191881|gb|AAY34900.1| small ribosomal protein subunit 4 [Hyophiladelphus agrarius] Length = 194 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S+ + K S + ++L KQK++ YYG I+E+ Sbjct: 1 VKIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFYYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESVGLKINELLVVEYYSR 192 >gi|237744174|ref|ZP_04574655.1| SSU ribosomal protein S4P [Fusobacterium sp. 7_1] gi|256027711|ref|ZP_05441545.1| 30S ribosomal protein S4 [Fusobacterium sp. D11] gi|260494240|ref|ZP_05814371.1| ribosomal protein S4 [Fusobacterium sp. 3_1_33] gi|289765670|ref|ZP_06525048.1| SSU ribosomal protein S4P [Fusobacterium sp. D11] gi|229431403|gb|EEO41615.1| SSU ribosomal protein S4P [Fusobacterium sp. 7_1] gi|260198386|gb|EEW95902.1| ribosomal protein S4 [Fusobacterium sp. 3_1_33] gi|289717225|gb|EFD81237.1| SSU ribosomal protein S4P [Fusobacterium sp. D11] Length = 195 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + R P KP+ + QLR KQK K Sbjct: 1 MARNRQPVLKKCRNLGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI S+R K GD++ V + SK + + A + A P ++ ++ + Sbjct: 115 IAVNGRRVNIASFRVKVGDIVSVIENSKNVELIKSAVEDA--TPPAWLELDRAAFSGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|37960593|gb|AAP70666.1| small ribosomal protein 4 [Sphagnum lescurii] Length = 191 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + +Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 RRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI S Sbjct: 58 YVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 YRCKPQDFISIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 GLKINELLVVEYYSR 189 >gi|11878074|gb|AAG40785.1| small ribosomal protein 4 [Takakia sp. LSU-47] Length = 192 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+G + K+P + Y ++ K S + ++L KQK++ ++G ++E++ Sbjct: 1 VIRRLGASPGLTNKTPQSKSGY---INQSTSNKKISQYRIRLEEKQKLRFHHG-VTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T + LE RLD +++R PTI ARQ VNHRH+LVN R+VNI Sbjct: 57 LKYVRIARRAKGSTGQVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRTVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 S+RCK D I K + K A + + +++ ++P ++++N +I Sbjct: 117 PSFRCKPQDFITTKDRQKSQAVITKNMDCSQKSEMPNHLTLNSSQKRGLVNQIIDR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|20531088|gb|AAM27365.1| ribosomal protein 4 [Diphyscium fasciculatum] Length = 194 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K V++ +++ +P +++++ +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQDIVVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + VVE+YSR Sbjct: 174 RESIGLKINELFVVEYYSR 192 >gi|229820502|ref|YP_002882028.1| ribosomal protein S4 [Beutenbergia cavernae DSM 12333] gi|259495269|sp|C5C5S5|RS4_BEUC1 RecName: Full=30S ribosomal protein S4 gi|229566415|gb|ACQ80266.1| ribosomal protein S4 [Beutenbergia cavernae DSM 12333] Length = 208 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 110/202 (54%), Gaps = 8/202 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ R +G L + R Y PG HG+ R+ S + ++L+ KQ+++ YG I E Sbjct: 11 VRLSRALGLPLTPKAAKYFEKRPYPPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREA 69 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R F EA R G T L+ LE RLD +V R+ F TI ARQ V HRHVLV+G+ V Sbjct: 70 QLRRAFDEARREAGLTGEALVELLEMRLDALVLRSGFARTIAQARQAVVHRHVLVDGKIV 129 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184 + S+R K G VI+VK +S+ A+ A RD VPEY+ V+ + + + VR P Sbjct: 130 DRPSFRVKPGQVIQVKPRSQARTPFQVAAAGAHRDVLAQVPEYLDVSLEKLRSELVRRPK 189 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV L+VE+Y+R Sbjct: 190 RAE---VPVTADVQLIVEWYAR 208 >gi|42556464|gb|AAS19827.1| small ribosomal protein 4 [Neotrichocolea bissetii] Length = 191 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N +VNI Sbjct: 57 KYVCIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + L ++ +P +++ + + + ++ Sbjct: 117 SYNCEPGDIITIRNKEKSQSIITRNINLFQKLKIPNHLTFDSTQLRGSVNQMIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IHLKINELLVVEYYSR 189 >gi|63191653|gb|AAY34788.1| small ribosomal protein subunit 4 [Rhytidium rugosum] gi|63191655|gb|AAY34789.1| small ribosomal protein subunit 4 [Dimerodontium balansae] Length = 195 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|80974180|gb|ABB53783.1| small ribosomal subunit protein 4 [Ptychomnion subaciculare] Length = 197 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 VNI SYRCK D I +K + + + ++ +P +++ + +I Sbjct: 117 SIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNKI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|37548879|gb|AAO32708.1| ribosomal protein 4 [Polytrichastrum longisetum] Length = 194 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 KIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VN Sbjct: 58 LLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVN 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 118 IPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDR 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 ESIGLKINELLVVEYYSR 192 >gi|18920745|gb|AAL82417.1| ribosomal protein system 4 [Isopterygiopsis muelleriana] Length = 196 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQSPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIDFYQKYKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|63191773|gb|AAY34846.1| small ribosomal protein subunit 4 [Polytrichastrum alpinum] Length = 194 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 57 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + ++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESINLKINELLVVEYYSR 192 >gi|28194693|gb|AAO33608.1|AF480963_1 ribosomal protein S4 [Anoectangium aestivum] Length = 196 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSEVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|18920769|gb|AAL82429.1| ribosomal protein system 4 [Plagiothecium denticulatum] Length = 197 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 58 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 LDRESIGLKINELLVVEYYSR 195 >gi|67035893|gb|AAY62873.1| small ribosomal protein subunit 4 [Trachyphyllum gastrodes] Length = 198 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I R+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIICRLGTLPGLTNKTPQLESGS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSSEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + L+VZ+YSR Sbjct: 176 --LDRESIGLKINELLIVZYYSR 196 >gi|42556418|gb|AAS19804.1| small ribosomal protein 4 [Gymnomitrion sp. 1989 Parnela] Length = 191 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN V+I Sbjct: 57 KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYSCELGDIITVKSKQKSQSIITKNVNLFQKLKIPGHLTFDSIELRGSVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|42556454|gb|AAS19822.1| small ribosomal protein 4 [Makinoa sp. He-Nygren 1295] Length = 190 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 9/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P + G Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 MRRLGALPGLTNKIPKSK----SGFTNQASNKKLSQYRIRLEEKQKLRFHYG-LTERQLL 55 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A R++G T L+ LE RLD I++R PTI +ARQ VNHRH+LVN V+I Sbjct: 56 KYVCIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPSARQLVNHRHILVNNYPVDIP 115 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ +VI ++ K + +++ L++ VP ++ + + ++ Sbjct: 116 SYNCEPENVISIRDPKKSRSIIIKNRDLSQGAKVPNHLIFDSTQFRGSVNQMIDRD---W 172 Query: 191 YPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 173 INLKINELLIVEYYSR 188 >gi|12642256|gb|AAK00210.1| rps4 [Splachnobryum obtusum] Length = 194 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G L G +N +S +K S + ++L KQK++ +YG I+E+ Sbjct: 1 CKIIRRLGT-LPGLSNKTLNLKSSFTNQSSSNKK--ISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R TI ARQ VNH+H+LVN R V Sbjct: 57 QLLNYVRIARKTKGSTGQILLQLLEMRLDNVLFRLGMATTIPGARQLVNHKHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQIMITKNVDFFQKSKIPSHLIFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|93213400|gb|ABF01126.1| ribosomal protein subunit 4 [Crossomitrium patrisiae] Length = 199 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI AARQ VNHRH++V Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K K K + + + ++ +P +++ N +I Sbjct: 117 NDFLVDIPSYRCKSQDFITIKNKKKSKTIISKNIEFYQKSKIPNHLTYNFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197 >gi|17025824|gb|AAL32079.1| ribosomal protein 4 [Leucophanes seychellarum] Length = 199 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K+P ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKILRRLGTLSGLSNKTPQLK---ASSINQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY CK D I +K + K +++ + + P ++ N +I Sbjct: 117 NNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFPKYKTPNHLIFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|28194749|gb|AAO33636.1|AF480991_1 ribosomal protein S4 [Geheebia gigantea] Length = 196 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSNST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|67036026|gb|AAY62939.1| small ribosomal protein subunit 4 [Aerolindigia capillacea] Length = 197 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D + +K K K + + +L ++ +P +++ + +I Sbjct: 117 CIVDIPSYRCKPQDFVTIKNKRKSENIISKNMELYQKYKIPNHLTYSFLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|121761884|gb|ABM65027.1| ribosomal protein S4 [Plagiomnium tezukae] Length = 195 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|37960595|gb|AAP70667.1| small ribosomal protein 4 [Sphagnum perichaetiale] Length = 195 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + +Y ++ K S + ++L KQK++ +YG I+ + Sbjct: 2 VRILRRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITXR 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|28194663|gb|AAO33593.1|AF480948_1 ribosomal protein S4 [Hyophila involuta] Length = 195 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S+ + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYIRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|18920737|gb|AAL82413.1| ribosomal protein system 4 [Herzogiella adscendens] Length = 196 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|63101085|gb|AAY33167.1| small ribosomal protein 4 [Stenodesmus tenuicuspis] Length = 199 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G L G + +S +K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGV-LPGLTNKILELKSSSITQSISNKK--ISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRHV+V Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVVV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K + + + ++ +P Y++ N +I Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQKKYEVIISKNIEFYQKSKIPNYLTYNFVEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|63101099|gb|AAY33174.1| small ribosomal protein 4 [Jaffueliobryum latifolium] gi|67035692|gb|AAY62777.1| small ribosomal protein subunit 4 [Indusiella thianschanica] gi|322719581|gb|ADX07727.1| small ribosomal protein subunit 4 [Indusiella thianschanica] Length = 194 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A V++ +++D VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQKDKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HGSIGLKINELLVVEYYSR 192 >gi|48527385|gb|AAT45825.1| small ribosomal protein 4 [Plagiochila lastii] Length = 195 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTVKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + + K ++V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNEQKSRSAVTKNVNSFQKLKIPSHLTFDSTQLQRSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVV 201 ++ + + + LVV Sbjct: 177 NQMINR---EWITLKINEVLVV 195 >gi|75858248|gb|ABA28698.1| small ribosomal protein 4 [Wettsteinia schusteriana] Length = 191 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTFKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ VN V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISVNNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ G++I +K K K + + + L + +P +++ + ++ + + Sbjct: 117 SYNCEPGNIITIKNKRKSQSIITKNINLFQNLKIPSHLTFDSIQLLGFVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|548865|sp|P36456|RR4_ELEIN RecName: Full=30S ribosomal protein S4, chloroplastic gi|439938|emb|CAA82436.1| ribosomal protein S4 [Eleusine indica] Length = 196 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFYSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +++ T L+ LE RLD IV+R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLRYVHIAGKAKKSTGQVLLQLLEMRLDNIVFRLGMASTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVNGR V+I S+RCK D+I K + V + + +P++++V+ Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASFDPGRLPKHLTVDTLQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + L VE+ Sbjct: 176 QKILDRK---WVGLKINELLFVEY 196 >gi|125662694|gb|ABN50297.1| small ribosomal protein 4 [Keteleeria davidiana var. calcarea] Length = 196 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 9/202 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P Y + K S + ++L KQK++ +YG + Sbjct: 1 GPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN Sbjct: 56 TERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVND 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184 V+I SY CK DVI ++ + + A + + L +RD +P +++ N +I Sbjct: 116 HMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFNSLQYKGFINQIID 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 SK---WISLKINELLVVEYYSR 194 >gi|49182679|gb|AAT57802.1| small ribosomal protein [Blasia pusilla] Length = 195 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR G K + Y L+ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRXGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N + Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNIN 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK D+I +K + K + + + ++ +P +++ + +I Sbjct: 117 VDIPSYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQIIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKINELLVVEYYSR 193 >gi|315655401|ref|ZP_07908301.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 51333] gi|315490341|gb|EFU79966.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 51333] Length = 206 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M R ++ R +G L + K R YGPG HG+ R+ S + ++L+ KQ+++ Sbjct: 1 MGNRSRKMVRLSRALGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y I E + F+EA R G T NL+ LE RLD +V RA F T+F ARQ V HRH Sbjct: 61 QYA-IREAQLVKTFQEARRMEGQTGDNLVELLEMRLDALVLRAGFGRTMFQARQAVTHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176 +LV+G+ V+ SY+ + G ++VK S+ + A++ + RD VP+Y+ V+ + + Sbjct: 120 ILVDGKIVDRPSYKVRPGQTVQVKPTSQVKDPFVVAARGSHRDVLPPVPDYLKVDLEKLR 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T R P + P+ + LVVE YSR Sbjct: 180 FTLERKPKREE---VPIQCEVQLVVEHYSR 206 >gi|218157233|gb|ACK58433.1| ribosomal protein subunit 4 [Psilopilum cavifolium] Length = 192 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 LNYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|49182758|gb|AAT57841.1| small ribosomal protein [Mastigophora diclados] Length = 188 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGTLPGLTSKTLKPKSSY---IDRSSSTKKVSQYRIRLEEKQKLRFHYG-LTEQQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNDIVDIPSYN 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 C+ G++I +K K K + + + L ++ +P +++ + + + +I + + Sbjct: 117 CEPGNIITIKNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSINQIINR---EWINL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37960611|gb|AAP70675.1| small ribosomal protein 4 [Sphagnum strictum] Length = 191 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 RRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI S Sbjct: 58 YVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + P +++++ + +I Sbjct: 118 YRCKPQDFITIKDRQKSQAIITRSMDYFRGYKTPNHLTLDSSQKKGSVNQIIDR---ESI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 GLKINELLVVEYYSR 189 >gi|67035670|gb|AAY62766.1| small ribosomal protein subunit 4 [Campylopus introflexus] Length = 194 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+ + + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + + +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HESIGLNINELLVVEYYSR 192 >gi|328541052|gb|AEB21750.1| ribosomal protein S4 [Lembidium nutans] Length = 195 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K Y K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE R D + R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +++K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ESIDLKINELLVVEYYSR 193 >gi|75858228|gb|ABA28688.1| small ribosomal protein 4 [Brevianthus flavus] Length = 191 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTL---EPKSSSIDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARRAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C GD I ++ K K + + + L ++ VP +++ + + + ++ + Sbjct: 117 SYNCGPGDSITIRNKQKSQSIITKNINLFQKLKVPSHLTFDSTQLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|67035964|gb|AAY62908.1| small ribosomal protein subunit 4 [Taiwanobryum speciosum] Length = 196 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I +K + K + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDLITIKDQRKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|304389439|ref|ZP_07371402.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656686|ref|ZP_07909573.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327249|gb|EFL94484.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492641|gb|EFU82245.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 206 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M R ++ R +G L + K R YGPG HG+ R+ S + ++L+ KQ+++ Sbjct: 1 MGNRSRKMVRLSRALGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRA 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y I E + F+EA R G T NL+ LE RLD +V RA F T+F ARQ V HRH Sbjct: 61 QYA-IREAQLVKTFQEARRMEGQTGDNLVELLEMRLDALVLRAGFGRTMFQARQAVTHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176 +LV+G+ V+ SY+ + G +++K S+ + A++ + RD VP+Y+ V+ + + Sbjct: 120 ILVDGKIVDRPSYKVRPGQTVQIKPTSQVKDPFVVAARGSHRDVLPPVPDYLKVDLEKLR 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T R P + P+ + LVVE YSR Sbjct: 180 FTLERKPKREE---VPIQCEVQLVVEHYSR 206 >gi|28194721|gb|AAO33622.1|AF480977_1 ribosomal protein S4 [Trichostomum crispulum] Length = 196 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNS 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVIITKNVDFSQKYKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|293634027|gb|ADE60393.1| ribosomal protein subunit 4 [Pogonatum belangeri] gi|293634061|gb|ADE60410.1| ribosomal protein subunit 4 [Pogonatum usambaricum] Length = 192 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 LNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFIIIKNRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SISLKINELLVVEYYSR 190 >gi|37960579|gb|AAP70659.1| small ribosomal protein 4 [Sphagnum compactum] Length = 193 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 ILRRLGVLPGLTNKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI Sbjct: 58 LKYVRIARRAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + + P +++++ + +I Sbjct: 118 PSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---E 174 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 SIGLKINELLVVEYYSR 191 >gi|80974162|gb|ABB53774.1| small ribosomal subunit protein 4 [Glyphothecium sciuroides] Length = 198 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I +K + + + ++ +P +++ + +I Sbjct: 117 DCIVNIPSYRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|12642238|gb|AAK00201.1| rps4 [Gigaspermum repens] Length = 192 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 IRRLGVLPGLTNKTPXLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V+I Sbjct: 58 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPEARQLVNHRHILVNDCMVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 118 SYRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI---LDRES 174 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 IGLKINELLVVEYYSR 190 >gi|17025847|gb|AAL32089.1| ribosomal protein 4 [Mitthyridium sp. Wall 3652] Length = 199 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGLRVKIIRRLGILSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ ++ ++ P +++ N +I Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFFSKHKTPNHLTFNSVEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|227549867|ref|ZP_03979916.1| 30S ribosomal protein S4 [Corynebacterium lipophiloflavum DSM 44291] gi|227078122|gb|EEI16085.1| 30S ribosomal protein S4 [Corynebacterium lipophiloflavum DSM 44291] Length = 178 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 100/182 (54%), Gaps = 6/182 (3%) Query: 26 PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 R Y PG G+ R + Y LQL+ KQK + YG + EK+FR ++EA+R G T Sbjct: 2 SFERRPYPPGQAGRARIKESEYL-LQLQEKQKARFIYG-VMEKQFRRYYEEANRLPGKTG 59 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 NL+ LESRLD +VYRA T ARQ V+H H VNG+ N+ SYR D+I+V++ Sbjct: 60 DNLLVLLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKRTNVPSYRVSRYDIIDVRE 119 Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 KS+ + EA L + VP ++ V + + ++P + V +Q L+VE Y Sbjct: 120 KSRAMIWFEEAQDNLVDSVVPAWLQVVPETLRILVHQLPERAQ---IDVPLQEQLIVELY 176 Query: 205 SR 206 S+ Sbjct: 177 SK 178 >gi|28194691|gb|AAO33607.1|AF480962_1 ribosomal protein S4 [Aschisma carniolicum] Length = 196 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SY CK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYSCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|18920727|gb|AAL82408.1| ribosomal protein system 4 [Acrocladium auriculatum] Length = 195 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 VNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|149126893|gb|ABR20460.1| small ribosomal protein [Trichocoleopsis sacculata] Length = 191 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N +VNI Sbjct: 57 KYVCIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNETVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + L ++ +P +++ + + + ++ Sbjct: 117 SYNCEPGDIITIRNKEKSQSIITRNMNLFQKLKIPNHLTFDSTQLRGSVNQMIQR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IYLKINELLVVEYYSR 189 >gi|24473850|gb|AAL82769.1| small ribosomal subunit protein 4 [Brachymenium nepalense] Length = 196 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 IVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|67035722|gb|AAY62792.1| small ribosomal protein subunit 4 [Octoblepharum albidum] Length = 200 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 7/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K RR+G K+ +S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRIKKIRRLGILPGLTNKTISQLKSSS--NNQSISNKKVSQYRIRLEEKQKLRFHYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A +++G T L+ LE RLD +++R PTI AARQ VNHR++LV Sbjct: 59 -LTEQQLLNYMRVARKTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPAARQLVNHRYILV 117 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK DVI +K + +++ + ++ +P ++S N +I Sbjct: 118 NNCIVNIPSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKYKIPNHLSFNALEKKGLVKQI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 178 ---LDQEFVGLKINELLVVEYYSR 198 >gi|157785995|gb|ABV74170.1| small ribosomal protein 4 [Hypopterygium tamarisci] Length = 197 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG Sbjct: 57 TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNG 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 YIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LNRESIGLKINELLVVEYYSR 195 >gi|37992563|gb|AAR06460.1| small ribosomal protein 4 [Isothecium myosuroides] Length = 195 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42556436|gb|AAS19813.1| small ribosomal protein 4 [Jungermannia leiantha] Length = 191 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKVLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 SYNCELGDIIAVKNKQKSQSIITKNINLFQKSKIPSHLTFDSAKLHGSVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VHLKINELLVVEYYSR 189 >gi|92417447|gb|ABE76819.1| ribosomal protein subunit 4 [Metzgeria furcata] Length = 198 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI R +G K+ + SY + K S + ++L KQK++ +YG Sbjct: 1 RGPRTKIIRXLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD+I +K + + + ++E + L + +P +++ + + + ++ Sbjct: 117 KDIVDIPSYNCELGDIITIKNQERYRSIIMERFNSLQKPGIPNHLAFDSTKFIGSVNQMI 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 NR---EWIDLEINELLVVEYYSR 196 >gi|39546753|gb|AAR28103.1| small ribosomal protein 4 [Alophosia azorica] Length = 194 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSGY---INQSVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A ++G T L+ LE RLD I++R P+I ARQ VNH+H+LVN V Sbjct: 57 QLLKYVRIAKGAKGSTGQILLQLLEMRLDNIIFRLGMAPSIPGARQLVNHKHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +L+ +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAIILKNMDFSQKYKIPNHLTFNSFEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RELIDLKINELLVVEYYSR 192 >gi|15894872|ref|NP_348221.1| 30S ribosomal protein S4 [Clostridium acetobutylicum ATCC 824] gi|26399602|sp|Q97IP6|RS4C_CLOAB RecName: Full=Putative 30S ribosomal protein S4 C gi|15024549|gb|AAK79561.1|AE007669_4 Ribosomal protein S4 [Clostridium acetobutylicum ATCC 824] gi|325509010|gb|ADZ20646.1| 30S ribosomal protein S4 [Clostridium acetobutylicum EA 2018] Length = 196 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K+ RR+G N++G PK+ + RK K S +G+ L KQK+K Sbjct: 1 MATMREPRFKLSRRLGVNIYGHPKAMKRFETT------NTRKKKISDYGMHLIEKQKLKA 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F K A +++ + +L+ LE RLD +VYR F +I ARQ V+H Sbjct: 55 YYGVL-EKQFSRYVKAAMKNKEASGSSLLKILECRLDNVVYRIGFANSIRQARQMVSHGL 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 +LVNG+ ++I SY + GDV+ +K+K +Q L+ +VP YI N D Sbjct: 114 ILVNGKKLDIPSYEVQVGDVVSLKEKHRQNEMFSNNFMNLSTFNVP-YIEKNPDEFSGKL 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R+P+ + P+ + V+EFYS+ Sbjct: 173 LRLPNIDE---IPIKVNEVAVIEFYSK 196 >gi|313573576|emb|CAT03210.1| ribosomal protein S4 [Chileobryon callicostelloides] Length = 196 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|78369631|gb|ABB43045.1| ribosomal protein 4 [Calymperes palisotii] Length = 196 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 10/203 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLSGLTNKIPQLKSSSIT-----MSNKKISQYRIRLEEKQKLRFHYG- 54 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 55 LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTISGARQLVNHRHILVN 114 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D I +K + K +++ + + +P +++ N +I Sbjct: 115 NRIVNIPSYKCKPQDFITIKDQQKYQTMIIKNINFSPKYKIPSHLTFNSVEKKGLVNQI- 173 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 --LDQESIGLKVNELLVVEYYSR 194 >gi|67035556|gb|AAY62709.1| small ribosomal protein subunit 4 [Aloinella cucullifera] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P+ S+ + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGILPXLTHKTPLLKSSFT---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R PTI ARQ VNH+H+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHKHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A +++ + +++ VP +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSRAMIIKNVEFSQKSKVPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|159040306|ref|YP_001539559.1| 30S ribosomal protein S4 [Salinispora arenicola CNS-205] gi|157919141|gb|ABW00569.1| RNA-binding S4 domain protein [Salinispora arenicola CNS-205] Length = 202 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 9/203 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K R +G L + R + PG HG+ RK S + ++L KQ++K Y +S Sbjct: 6 PKVKRSRALGIPLTPKCVRYFERRPFPPGQHGRSRK-STSDYKVRLLEKQRLKAQY-HVS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R F A R T LI LE+RLD +V R+ TI+ ARQ V HRHV VNG Sbjct: 64 EGQLRRAFTRAARLESKTGEALIVDLETRLDALVLRSGLARTIYQARQVVTHRHVTVNGH 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIP 183 V+ S R + GDVI V +S+ A L A+ A ER P Y++V+ ++ A +R+P Sbjct: 124 RVDRPSARLRPGDVIAVTARSRTKAPFLVAAAGAHAPERSAP-YLAVDLADLTARLLRLP 182 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + PV Q LVVE YSR Sbjct: 183 LRSE---VPVTCQEQLVVEHYSR 202 >gi|42556500|gb|AAS19845.1| small ribosomal protein 4 [Schiffneria hyalina] Length = 191 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + +Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGVLPGLTSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNH H+ +N ++I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISINKNIIDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY + GD+I ++ K K + + + L ++ +P +++ + + + +I + Sbjct: 117 SYIREAGDIITMRDKQKSKSMITKNINLFQKLKIPSHLTFDLTQLQGSVNQIVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|37960585|gb|AAP70662.1| small ribosomal protein 4 [Sphagnum cyclophyllum] Length = 191 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + SY ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 RRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI S Sbjct: 58 YVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + + + P +++++ + +I Sbjct: 118 YRCKPQDFITIKDRQESQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 GLKINELLVVEYYSR 189 >gi|237742279|ref|ZP_04572760.1| SSU ribosomal protein S4P [Fusobacterium sp. 4_1_13] gi|256845558|ref|ZP_05551016.1| ribosomal protein S4 [Fusobacterium sp. 3_1_36A2] gi|294785153|ref|ZP_06750441.1| ribosomal protein S4 [Fusobacterium sp. 3_1_27] gi|229429927|gb|EEO40139.1| SSU ribosomal protein S4P [Fusobacterium sp. 4_1_13] gi|256719117|gb|EEU32672.1| ribosomal protein S4 [Fusobacterium sp. 3_1_36A2] gi|294486867|gb|EFG34229.1| ribosomal protein S4 [Fusobacterium sp. 3_1_27] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + R P KP+ + QLR KQK K Sbjct: 1 MARNRQPVLKKCRNLGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ EK+FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H Sbjct: 56 IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR VNI S+R K GD++ V + SK + + A + A P ++ ++ + Sbjct: 115 IAVNGRRVNIASFRVKVGDIVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + +L+VEFYSR Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195 >gi|116010531|emb|CAL38869.1| ribosomal protein S4 [Dipsacus fullonum] Length = 196 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 7/200 (3%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G+ K P G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGDLPGLTNKKP----RAGSDPRNQSRSVKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R I++R PTI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQVLLRLLEMRFHNILFRLGMAPTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I + + A + ++ + ++P+++++ +I S Sbjct: 116 VDIPSYRCKPRDIITARDEQNSRALIQKSLDSSTHEELPKHLTLQSFQYKGLVNQIIDS- 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 K V + + LVVE+YSR Sbjct: 175 KWVVLNLKINELLVVEYYSR 194 >gi|121761730|gb|ABM64952.1| ribosomal protein S4 [Plagiomnium drummondii] gi|121761744|gb|ABM64959.1| ribosomal protein S4 [Plagiomnium ciliare] gi|121761796|gb|ABM64984.1| ribosomal protein S4 [Plagiomnium ciliare] gi|121761810|gb|ABM64991.1| ribosomal protein S4 [Plagiomnium ciliare] gi|121761812|gb|ABM64992.1| ribosomal protein S4 [Plagiomnium ciliare] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|20531103|gb|AAM27372.1| ribosomal protein 4 [Blindia magellanica] Length = 192 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 LNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D +K + K A V++ +++ VP +++ N +I L Sbjct: 117 PSYRCKPQDFFTIKDRQKSQAMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|67035933|gb|AAY62893.1| small ribosomal protein subunit 4 [Erythrodontium longisetum] Length = 197 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ E R D +++R PTI ARQ VNH+H+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHKHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 SIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|313573570|emb|CAT03207.1| ribosomal protein S4 [Neckera himalayana] gi|313573572|emb|CAT03208.1| ribosomal protein S4 [Neckera polyclada] Length = 196 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I +K + K + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|153954808|ref|YP_001395573.1| 30S ribosomal protein S4 [Clostridium kluyveri DSM 555] gi|219855268|ref|YP_002472390.1| hypothetical protein CKR_1925 [Clostridium kluyveri NBRC 12016] gi|146347666|gb|EDK34202.1| RpsD2 [Clostridium kluyveri DSM 555] gi|219568992|dbj|BAH06976.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 197 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ R K K+ RR+G N++G PK ++ HG + S +G QL KQK+K Sbjct: 1 MATRREPKFKLCRRLGVNIYGHPK-AMDRVKKVNSRHGSK----ISEYGRQLLEKQKIKA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F+ + A++S+ T L+ LE RLD IVYR F +I +RQ VNH H Sbjct: 56 YYG-LFEKQFKRYIRRAEKSKNVTGTALLKILECRLDNIVYRIGFGNSIRQSRQMVNHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATF 179 +LVN + +NI SY GDVI + QKS+ L + ++P YI N DN Sbjct: 115 ILVNNKKINIPSYEVHAGDVISLVQKSRNNKEFCFNFLDLRKFELP-YIEKNFDNFQGIL 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R+P + P+ + VVE YS+ Sbjct: 174 IRLPEKEE---LPIEVNEIAVVELYSK 197 >gi|293634037|gb|ADE60398.1| ribosomal protein subunit 4 [Pogonatum dentatum] Length = 192 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 10/198 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 I RR+G K+P PG Q K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLK----PGYMNQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VN Sbjct: 56 LLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + + + + +++ +P +++ N +I L Sbjct: 116 IPSYRCKPQDFITIKDRQESQVIIDKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDR 172 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 ESIGLKINELLVVEYYSR 190 >gi|66866218|gb|AAY57781.1| small ribosomal protein 4 [Cryptopodium bartramioides] Length = 207 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 13/212 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + +I RR+G K+P + ++ K S + ++L KQK++ Sbjct: 1 MPGYRGPRVRIIRRLGVLPGLTNKTPQVKSNS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDN 174 +LVN R VNI SYRCK D I +K + K + + ++ +P +++ N Sbjct: 117 ILVNDRIVNIPSYRCKPQDFITIKDRQKYQTIIXXXXXXKNIDFCQKYKIPHHLTYNSLE 176 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 KKGLVNQI---LDRESIALKINELLVVEYYSR 205 >gi|28194719|gb|AAO33621.1|AF480976_1 ribosomal protein S4 [Weissia controversa] Length = 196 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|11228617|gb|AAG33094.1| small ribosomal protein 4 [Bryoxiphium norvegicum] Length = 191 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|18920747|gb|AAL82418.1| ribosomal protein system 4 [Isopterygiopsis pulchella] Length = 196 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVSSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|121761742|gb|ABM64958.1| ribosomal protein S4 [Plagiomnium cuspidatum] gi|121761748|gb|ABM64961.1| ribosomal protein S4 [Plagiomnium cuspidatum] gi|121761765|gb|ABM64969.1| ribosomal protein S4 [Plagiomnium cuspidatum] gi|121761785|gb|ABM64979.1| ribosomal protein S4 [Plagiomnium cuspidatum] gi|121761794|gb|ABM64983.1| ribosomal protein S4 [Plagiomnium cuspidatum] gi|121761818|gb|ABM64995.1| ribosomal protein S4 [Plagiomnium acutum] gi|121761871|gb|ABM65021.1| ribosomal protein S4 [Plagiomnium acutum] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|121761767|gb|ABM64970.1| ribosomal protein S4 [Plagiomnium ellipticum] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|37992537|gb|AAR06447.1| small ribosomal protein 4 [Hampeella alaris] Length = 199 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I VK + + +++ +P ++ + +I Sbjct: 117 NDCIVNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|42556510|gb|AAS19850.1| small ribosomal protein 4 [Trichocolea tomentella] Length = 191 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKYSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R PTI ARQ V HRH+ +N V+I Sbjct: 57 KYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMAPTIPGARQLVTHRHISINNEIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD I ++ K K + + + L ++ +P +++ N + + + + Sbjct: 117 SYNCEPGDTITIRNKQKSQSVITKNINLFQKLKIPSHLTFNSTQLRGSVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|39546763|gb|AAR28108.1| small ribosomal protein 4 [Porella pinnata] gi|49182782|gb|AAT57853.1| small ribosomal protein [Porella pinnata] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + + K S + ++L KQK++ +YG ++E Sbjct: 1 RLKIIRRLGALPGFTAKTL---KPKSSNIDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++G T L+ LE RLD ++ TI ARQ VNH+H+ +N + Sbjct: 57 RQLLKYIRTARNAKGSTGQILLQLLEMRLDNTIFCLGMASTIPGARQLVNHKHISINNDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I ++ + K + + ++ ++P +++ + + + ++ + Sbjct: 117 VDIPSYNCKPGDIITIRNREKSQSIITRNINSFKKLEIPNHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWINLKVNELLVVEYYSR 193 >gi|37960591|gb|AAP70665.1| small ribosomal protein 4 [Sphagnum lapazense] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTNKTPQSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + ++ P +++++ +I Sbjct: 118 NIPSYRCKPRDFITIKDRPKSQAIITRSMDYSQSHKTPNHLNLDSSQKKGLVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|67035978|gb|AAY62915.1| small ribosomal protein subunit 4 [Rhytidiadelphus triquetrus] Length = 194 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|80974170|gb|ABB53778.1| small ribosomal subunit protein 4 [Ptychomnion aciculare] Length = 197 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 VNI SYRCK D I +K + + + ++ +P +++ + +I Sbjct: 117 SIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKSKIPNHLTYSFLEKKGLINKI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|67035586|gb|AAY62724.1| small ribosomal protein subunit 4 [Bruchia drummondii] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKIPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A +L+ +++ VP +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGVVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|66866214|gb|AAY57779.1| small ribosomal protein 4 [Plagiopus oederianus] Length = 208 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 13/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 5 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMVA 177 N R V+I SYRCK D I +K + K A + + ++ +P +++ N Sbjct: 121 NDRMVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYNSLENKG 180 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + LVVE+YSR Sbjct: 181 LVNQI---LDRESIGLKTNELLVVEYYSR 206 >gi|47606916|gb|AAT36378.1| ribosomal protein subunit 4 [Mittenia plumula] Length = 194 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + L ++ S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSTSINQLISNKK---ISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVNGR V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHKHILVNGRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K V++ +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDSIIIKDRQKSKNIVIKNLDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKVNELLVVEYYSR 192 >gi|24473846|gb|AAL82767.1| small ribosomal subunit protein 4 [Bryum gemmiparum] Length = 197 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGALQGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|67035638|gb|AAY62750.1| small ribosomal protein subunit 4 [Hypodontium dregei] Length = 194 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKYQAMIIKNLDFSQKTKVPNHLTFNSLEKNGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|121761835|gb|ABM65003.1| ribosomal protein S4 [Plagiomnium novae-zealandiae] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|67035656|gb|AAY62759.1| small ribosomal protein subunit 4 [Ceratodon purpureus] gi|67035658|gb|AAY62760.1| small ribosomal protein subunit 4 [Ceratodon purpureus] gi|67035660|gb|AAY62761.1| small ribosomal protein subunit 4 [Ceratodon purpureus] Length = 194 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K +++ + +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESVGLKINELLVVEYYSR 192 >gi|83940937|gb|ABC48865.1| rps4 [Pterostyrax psilophyllus] Length = 193 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G K P++ G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 3 KIRRLGALPGLTNKRPID----GTDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LTERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 58 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D+I + + K + + + ++P+++++ +I S Sbjct: 118 PSYRCKPRDIITSRDEQKSRVLIQHSLDSSHHEELPKHLTLYPFQYKGLVNQIIDSK--- 174 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 WVGLKINELLVVEYYSR 191 >gi|49182807|gb|AAT57865.1| small ribosomal protein [Telaranea pulcherrima] Length = 196 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ SY K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D + R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRPDNTILRLGMASTIPGARQLVNHRHISINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSIDQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIDLKINELLVVEYYSR 193 >gi|28194695|gb|AAO33609.1|AF480964_1 ribosomal protein S4 [Leptobarbula berica] Length = 196 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFISIKDRQKSQVMITKNIDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LNQESIGLKINELLVVEYYSR 194 >gi|157689440|gb|ABV65276.1| ribosomal protein S4 [Ceanothus prostratus] Length = 191 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G + P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KIRRLGALPGLTSQKP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRFHYG-LTEQQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 56 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D+I V+ + K A V A ++P++++++ +I S Sbjct: 116 PSYRCKTRDIITVRDEQKSRALVQNYLDSASPEELPKHLTLHPFQYKGFINQIIDSK--- 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 WVGLKINELLVVEYYSR 189 >gi|227345141|gb|ACP28123.1| small ribosomal protein 4 [Eotrichocolea polyacantha] Length = 191 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ +Y + K S + ++L KQK++ +YG ++E++ Sbjct: 2 RRLGALPGLTNKTLKPKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I S Sbjct: 58 YLRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNEIVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ GD I ++ K K + + + L ++ +P +++ + + + +I + Sbjct: 118 YNCEPGDTITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQIINR---EWI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 HLKINELLVVEYYSR 189 >gi|18920755|gb|AAL82422.1| ribosomal protein system 4 [Myurella julacea] Length = 197 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 4 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 59 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 60 QLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 119 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 120 DIPSYRCKPQDFITIKDQKKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 176 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RESIGLKINELLVVEYYSR 195 >gi|7109199|gb|AAF36675.1| ribosomal protein 4 [Rhabdoweisia crispata] Length = 190 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI S Sbjct: 57 YLRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCTVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQKSQAMISKNIDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLKINELLVVEYYSR 188 >gi|121761873|gb|ABM65022.1| ribosomal protein S4 [Plagiomnium acutum] Length = 195 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + ++ RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRLIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKNRQKSQTMISKNIDFCQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|37992567|gb|AAR06462.1| small ribosomal protein 4 [Lembophyllum divulsum] Length = 195 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|314906415|gb|ADT61780.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 196 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|315924067|ref|ZP_07920293.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622469|gb|EFV02424.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC 23263] Length = 204 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 112/206 (54%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M ++ + K RR G NL+G PK+ S RR+ KPS + QL KQK+K Sbjct: 10 MGQKRKPRFKQCRRFGVNLYGNPKALDRKVSE-------RRRGKPSEYSQQLNEKQKVKA 62 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YY +I EK+ R +++A + G TS +L LESRLD +V R F TIF ARQ V H H Sbjct: 63 YY-NIREKQMRRYYEDAFKREGTTSLHLFRSLESRLDNLVLRMHFASTIFQARQMVGHGH 121 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNGR V+I SY+ + GD I +KQ S+ Q Y+ V+ + T+ Sbjct: 122 ILVNGRRVDIPSYQVRPGDTISLKQASRSNEMFKANFQDNAGAAVPYVCVDENQFSGTYE 181 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ ++ LV+EFYSR Sbjct: 182 RLPERGE---IPIDVEDQLVIEFYSR 204 >gi|42556396|gb|AAS19793.1| small ribosomal protein 4 [Bazzania sp. He-Nygren 569] Length = 191 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ S+ K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSH---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNH+HV +N V+I Sbjct: 57 KYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 SYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|21914184|gb|AAM81314.1| ribosomal protein subunit 4 [Rhodobryum spathulatum] Length = 196 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGALPGPTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYIRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRC+ D I +K + K A + + L ++ P +++ N +I Sbjct: 117 IVNIPSYRCRPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|67035708|gb|AAY62785.1| small ribosomal protein subunit 4 [Campylostelium angustifolium] Length = 194 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKXPQLK---PSXINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNXIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFINIKDQQKSQAMIIKNVDFSQKYKVPNHLTFNSVEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 174 NESXGLKINELLVVEYYSR 192 >gi|224179457|ref|YP_002600860.1| ribosomal protein S4 [Pycnococcus provasolii] gi|217314500|gb|ACK36842.1| ribosomal protein S4 [Pycnococcus provasolii] Length = 201 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+GE + + R+ PG HG R+ + F ++LR KQK++ Sbjct: 1 MSRYRGPRIRVVRRLGELPGLTRR--IAKRTNPPGEHGAARQKQS-QFDIRLREKQKLRY 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ ++ + A +S+G T + L+S LE RLD IVYR F PTI A+RQ V H H Sbjct: 58 HYG-VTERQLLTLVRRARQSKGATGNFLLSTLERRLDNIVYRLGFAPTIRASRQLVTHGH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNGR V+I S+ C+ GD+I + +++ V + +R +P ++++ D + Sbjct: 117 ICVNGRCVDISSFNCQIGDIISINTRTQSQKLVEGFIKSNDRPIPPFLALQPDGKSGRVL 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + +P L +E YSR Sbjct: 177 Q---NCSLKDIGLQARPQLSIEHYSR 199 >gi|26421825|gb|AAN78171.1| ribosomal protein S4 [Tortula marginata] Length = 195 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLSNKIPHLK---PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|18920763|gb|AAL82426.1| ribosomal protein system 4 [Orthothecium rufescens] Length = 195 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|331004148|ref|ZP_08327628.1| 30S ribosomal protein S4 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411558|gb|EGG90968.1| 30S ribosomal protein S4 [Lachnospiraceae oral taxon 107 str. F0167] Length = 197 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + R +R K S +GLQLR KQK K Sbjct: 1 MAINRVPVLKRCRSLGLEPGFLGIDKKSNRDT------KRANRKLSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A+R +G NL+ LE RLD +V+R T RQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKAERMKGQVGENLMVLLERRLDNVVFRMGLGRTRKETRQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+K+K++ A E + A R VP +I + +N+ T Sbjct: 114 VLVNGKCVNIPSYLVKAGDVIEIKEKARSSARYKEVVESTAGRIVPAWIDADLENLKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KSLPTREE---IDVPVDELLIVELYSK 197 >gi|37548873|gb|AAO32705.1| ribosomal protein 4 [Polytrichadelphus pseudopolytrichum] Length = 192 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 7/196 (3%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y +K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGYINQQTLSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 58 NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A ++ +++ +P +++ N +I L Sbjct: 118 SYRCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 174 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 IDLKINELLVVEYYSR 190 >gi|11228650|gb|AAG33110.1| small ribosomal protein 4 [Kiaeria blyttii] Length = 190 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|3098214|gb|AAC15555.1| small ribosomal protein 4 [Paludella squarrosa] Length = 195 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|63191683|gb|AAY34803.1| small ribosomal protein subunit 4 [Orthothecium chryseum] Length = 195 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|22854705|gb|AAN09772.1| small ribosomal protein 4 [Distichium inclinatum] Length = 191 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R TI ARQ +NHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLINHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ + +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIIKNIEFSQKYKVPNHLTFNSLQKKGLVTQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VGLKINELLVVEYYSR 189 >gi|77862563|gb|ABB04554.1| small ribosomal protein 4 [Wiesnerella denudata] Length = 201 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + Y ++ K S + ++L KQK++ +YG ++E Sbjct: 7 RVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 62 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N + Sbjct: 63 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINNNT 122 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SY CK DVI +K ++K + + + ++ +P +++ + + +I Sbjct: 123 IDIPSYNCKPKDVITIKDRAKSQSIITKNLNSFQKPKIPNHLTFDLMQIKGLVNQIIDR- 181 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 182 --EWIYLKINELLVVEYYSR 199 >gi|18920735|gb|AAL82412.1| ribosomal protein system 4 [Catagonium nitens subsp. maritimum] Length = 197 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGALPGLSNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 58 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 LDRESIGLKINELLVVEYYSR 195 >gi|222103452|gb|ACM44255.1| small ribosomal protein subunit 4 [Plagiothecium platyphyllum] Length = 203 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 7/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ S+ + +K++ +YG Sbjct: 4 YRGPRVRIIRRLGTLPGLTNKTPQLKSSSINQSTSNKKIFSVSHSFRR--KNKKLRFHYG 61 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 62 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 180 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201 >gi|63191753|gb|AAY34836.1| small ribosomal protein subunit 4 [Leiomitrium plicatum] Length = 196 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + ++ +P ++ N +I Sbjct: 117 IVNIPSYRCKPLDFITIKDRQKSQNIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRELIGLKINELLVVEYYSR 194 >gi|121761823|gb|ABM64997.1| ribosomal protein S4 [Plagiomnium maximoviczii] Length = 195 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|21914144|gb|AAM81294.1| ribosomal protein subunit 4 [Acidodontium seminerve] Length = 196 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A + +G T L+ FLE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKVKGSTGEILLQFLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 IVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFSKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|7576775|gb|AAF63984.1| small ribosomal protein 4 [Polytrichum commune] gi|37548883|gb|AAO32710.1| ribosomal protein 4 [Polytrichum juniperinum] gi|293634125|gb|ADE60442.1| ribosomal protein subunit 4 [Polytrichum strictum] Length = 192 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|21914180|gb|AAM81312.1| ribosomal protein subunit 4 [Haplodontium megalocarpum] Length = 196 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 MVNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNVLKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|28194731|gb|AAO33627.1|AF480982_1 ribosomal protein S4 [Syntrichia leucostega] Length = 196 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|5911468|emb|CAA58928.1| ribosomal protein S4 [Cycas revoluta] Length = 196 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 9/204 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P +R+ R+ S + ++ KQK+ Sbjct: 1 MSRYRGPRLKIIRRLRTLPGLTNKRP-KSRNVPTNQSSSRK---ISQYRIRPEEKQKLPF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 +LVN R V+I SYRCK DVI + + + A + + L+++D +P +++++ Sbjct: 116 ILVNDRVVDIPSYRCKPRDVITIIDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I S + + LVVE+ Sbjct: 176 NQIIDSK---WISLKINELLVVEY 196 >gi|67035684|gb|AAY62773.1| small ribosomal protein subunit 4 [Holomitriopsis laevifolia] Length = 194 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K + + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKISQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + V + + +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFNSLEKKGVVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HESIGLKINELLVVEYYSR 192 >gi|11467040|ref|NP_041947.1| ribosomal protein S4 [Euglena gracilis] gi|133953|sp|P27418|RR4_EUGGR RecName: Full=30S ribosomal protein S4, chloroplastic gi|336889|gb|AAA84230.1| ribosomal protein S4 [Euglena gracilis] gi|415790|emb|CAA50134.1| 30S ribosomal protein S4 [Euglena gracilis] gi|228205|prf||1718312A ribosomal protein S4 Length = 205 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 5/207 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RRIG+ K+ +S G +RK K S + ++L+ KQK++ Sbjct: 1 MSRYRGPRLRIVRRIGKLPSLTNKTSKKRKSPGQPATSFKRKKKISKYNIRLKEKQKLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E++ + K++ + +G + L++FLE RLD IV+R F PTI AA+Q +NH H Sbjct: 61 NYG-ITERQLLNYVKKSRKKKGSSGRFLLTFLEMRLDNIVHRIGFAPTIMAAKQLINHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + V+ + +NI S+ C+ +I+ K+ + + + + E +P ++S+N N+ A Sbjct: 120 ICVDDKVINIPSFICQPKSIIKPKKSTVSENVIQKNIESKELLLIPPHLSLNKKNLEAKI 179 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + +I+ LV+EFYSR Sbjct: 180 IGLINRKA---ISLIVNELLVIEFYSR 203 >gi|293634085|gb|ADE60422.1| ribosomal protein subunit 4 [Polytrichastrum emodi] Length = 192 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A + ++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SINLKINELLVVEYYSR 190 >gi|24473834|gb|AAL82761.1| small ribosomal subunit protein 4 [Plagiobryum wrightii] Length = 196 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 IVNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|63078570|gb|AAY29372.1| ribosomal protein S4 [Chionoloma bombayense] Length = 197 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLSNKTPHLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R +NI SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RILNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQELIGLKINELLVVEYYSR 195 >gi|63191730|gb|AAY34825.1| small ribosomal protein subunit 4 [Leiomela bartramioides] Length = 194 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ ++P +++ N +I L Sbjct: 117 DIPSYRCKSHDFITIKDRQKSQTIISKNIDFYQKYEIPNHLTYNSSENKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|227345115|gb|ACP28110.1| small ribosomal protein 4 [Castanoclobos julaceus] Length = 191 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNH H+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GDVI V+ K K + + + L ++ + +++ + + + + + Sbjct: 117 SYNCESGDVITVRNKQKSQSIITKNINLFQKLKLSNHLTFDSTQLCGSINQTINR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|157689534|gb|ABV65323.1| ribosomal protein S4 [Parnassia palustris] Length = 194 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGVLPGLTGKRP----RVGNDLRTQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ +E RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVRIAGKAKGSTGQILLQLIEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K + K A + ++P++++++ RI S Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRALIQNYLYSSTHEELPKHLTLHPIQYKGLVNRIIESQ 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---FIGLKINELLVVEYYSR 192 >gi|42556470|gb|AAS19830.1| small ribosomal protein 4 [Nowellia sp. He-Nygren 1097] Length = 190 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ + +Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGVLPGLSSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD V+R PTI ARQ VNH H+ +N ++I S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHGHISMNNNIIDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ GD+I ++ K + + + + L ++ P +++ + + + ++ + Sbjct: 117 YNCQPGDIITIRNKLESRSMITKNINLFQKLKTPSHLTFDLTELQGSVNQMINR---EWV 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NLKINELLVVEYYSR 188 >gi|7109201|gb|AAF36676.1| ribosomal protein 4 [Grimmia pulvinata] Length = 196 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 4 KIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 59 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VN Sbjct: 60 LLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVN 119 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + +++ +++ +P +++ N +I L Sbjct: 120 IPSYRCKPQDFITIKDRQKSQSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDH 176 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ESIGLKINELLVVEYYSR 194 >gi|42794671|gb|AAS45732.1| Rps4 [Psammisia sodiroi] Length = 209 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQ + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQNL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSK-----QLASVLEASQLAERDVPEYISVNHD 173 RHVLVNGR ++I SYRCK D+I ++KS+ ++ + + VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRVPYHLTLNRG 175 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 205 >gi|37548875|gb|AAO32706.1| ribosomal protein 4 [Polytrichastrum alpinum] Length = 193 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 KXIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VN Sbjct: 57 LLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 IPSYRCKPQDFITIKDRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLINQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|121761724|gb|ABM64949.1| ribosomal protein S4 [Plagiomnium medium] gi|121761738|gb|ABM64956.1| ribosomal protein S4 [Plagiomnium medium] gi|121761752|gb|ABM64963.1| ribosomal protein S4 [Plagiomnium medium] gi|121761781|gb|ABM64977.1| ribosomal protein S4 [Plagiomnium medium] gi|121761787|gb|ABM64980.1| ribosomal protein S4 [Plagiomnium medium] Length = 195 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|259506742|ref|ZP_05749642.1| 30S ribosomal protein S4 [Corynebacterium efficiens YS-314] gi|259165683|gb|EEW50237.1| 30S ribosomal protein S4 [Corynebacterium efficiens YS-314] Length = 178 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 6/182 (3%) Query: 26 PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 R Y PG G+ R + Y LQL+ KQK + YG + EK+FR + EA+R G T Sbjct: 2 AFERRPYPPGQAGRARIKESEYL-LQLQEKQKARFIYG-VMEKQFRRYYAEANRRPGKTG 59 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 NL+ LESRLD +VYRA T ARQ V+H H +VNG++V++ S+R + D+I+V++ Sbjct: 60 ENLVVMLESRLDNVVYRAGLARTRRQARQLVSHGHFVVNGKAVDVPSFRVSQYDIIDVRE 119 Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 KS+++ EA L + VP ++ V + ++P + + +Q L+VEFY Sbjct: 120 KSQKMNWFEEAQDNLVDAIVPAWLQVVPSTLRILVHQLPERAQ---IDIPLQEQLIVEFY 176 Query: 205 SR 206 S+ Sbjct: 177 SK 178 >gi|227499169|ref|ZP_03929304.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904616|gb|EEH90534.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 197 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ ++ K R +G + + +R+ K S +G+QL KQK K Sbjct: 1 MAIDKTPVLKRCRSLGMSPAFVG-VMKESHRQP-----KRQFKKKSEYGMQLAEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +++A + G NL+ LE RLD +VYR T ARQ V H H Sbjct: 55 IYGVL-EKQFRGYYEKAKKMEGIAGTNLLILLERRLDNVVYRLGLARTRRQARQLVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNMVATF 179 + VNG+ ++I S K GDV+ V + S+ A A L + VP +ISV+ N+ Sbjct: 114 IAVNGKRLDIPSALVKAGDVVSVMEGSRSSAYFKGMAETLGKSAVPAWISVDGQNLSGKV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + V ++ L++E YS+ Sbjct: 174 DRLPVRDE---IDVPIEEQLIIELYSK 197 >gi|171920763|ref|ZP_02695909.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179021|ref|ZP_02555262.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024074|ref|ZP_02569813.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518325|ref|ZP_02556234.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524320|ref|ZP_02557924.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867952|ref|ZP_03079949.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273253|ref|ZP_03205789.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554088|ref|YP_002284942.1| 30S ribosomal protein S4 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551036|ref|ZP_03771982.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226695097|sp|B5ZC02|RS4_UREU1 RecName: Full=30S ribosomal protein S4 gi|171903514|gb|EDT49803.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209112|gb|EDU06155.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019116|gb|EDU57156.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998272|gb|EDU67369.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660051|gb|EDX53431.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660348|gb|EDX53608.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249773|gb|EDY74553.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541589|gb|ACI59818.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378851|gb|EEH01216.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 202 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 116/209 (55%), Gaps = 12/209 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ S +K RR+G +L K R+YGPG HG +K K S +G QL KQK+ Sbjct: 1 MSRYTGSIYKKSRRLGFSLLENNKEFNSGKKRTYGPGQHGN-KKVKLSNYGQQLVEKQKL 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +++++FR +++ A G + NL+ LESRLD++VYRA F PT AARQ VNH Sbjct: 60 MFLYG-LNDRQFRRLYRVALGRPGVLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVA 177 HVLVNG+ VNI S + G I +K+KS ++ + ++I V+ D VA Sbjct: 119 SHVLVNGKKVNIPSALVEVGSTIALKEKSLEMPLIKNTLNKPA----DFIELVDKDKKVA 174 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + VVE+Y+R Sbjct: 175 KLSRLPERSE---LPADVNEAYVVEWYNR 200 >gi|21914176|gb|AAM81310.1| ribosomal protein subunit 4 [Epipterygium tozeri] Length = 195 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQNYKIPNHLTYNSLTKKGLVXQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|11228631|gb|AAG33101.1| small ribosomal protein 4 [Dicranoweisia cirrata] Length = 190 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|63191724|gb|AAY34822.1| small ribosomal protein subunit 4 [Flowersia campylopus] Length = 195 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGXLPGLTNKTPXLKSSS---INQSTSNKKISXYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAIIXKNIDFYQKYKIPNHLTYNSLENKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|288916882|ref|ZP_06411255.1| ribosomal protein S4 [Frankia sp. EUN1f] gi|288351767|gb|EFC85971.1| ribosomal protein S4 [Frankia sp. EUN1f] Length = 201 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 110/202 (54%), Gaps = 7/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K+ R IG L + R Y PG HG+ RK+ Y +LR KQ+++ Y IS Sbjct: 5 PVAKLSRSIGMPLTDKAARYFENRPYPPGPHGRGRKTMSPY-KERLREKQRLRFQY-HIS 62 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+ R F +ADR G T H LI LE+RLD +V RA F TI+ ARQFV+HRH+ VNG Sbjct: 63 EKQLRRAFDQADRGTGRTGHLLIEDLETRLDAVVLRAGFAKTIYQARQFVSHRHIQVNGG 122 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--YISVNHDNMVATFVRIPS 184 V+ +R + GDVI V +S+ +A ++ P Y+ V+ +VA R PS Sbjct: 123 RVDRPGFRVQPGDVITVTTRSRTMAPFRIVAETQPTGAPPPAYLDVDRGALVAVLSRRPS 182 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV+ LVVE+Y+R Sbjct: 183 RPE---IPVVCDEQLVVEYYAR 201 >gi|3098240|gb|AAC15568.1| small ribosomal protein 4 [Leptotheca gaudichaudii] Length = 195 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|197131490|gb|ACH47263.1| ribosomal protein S4 [Sarcocaulon vanderietiae] Length = 213 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 13/215 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 MS + K RR+G K ++R + R K S + ++L Sbjct: 1 MSHYRGPRFKKIRRLGALPGLTIRKKKPKKRKGDSRRDSSSIMPPRSSRKKSQYRIRLEE 60 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ+++ +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ Sbjct: 61 KQRVRFHYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPRARQ 119 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVN 171 VNHRH+LVNGR V+I SYRCK D+I ++K K A + A + VP +++ Sbjct: 120 LVNHRHILVNGRIVDIPSYRCKPRDIITAREKEKSRALIQNYLDSAPAPRKAVPNHLTTY 179 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I K + + LVVE+YSR Sbjct: 180 RRQYKGLVKQIIDRKK---VGLKINEFLVVEYYSR 211 >gi|67035712|gb|AAY62787.1| small ribosomal protein subunit 4 [Exodictyon dentatum] Length = 198 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKILRRLGTLSGLSNKTPQSK---ASSINQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRFGLAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D+I +K + K +++ + + +P ++ N +I Sbjct: 117 NRIVNIPSYQCKPQDLITIKDQQKYQTMIVKNTNFFPKSKIPNHLIFNSAEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + L+VE+YSR Sbjct: 176 --LDKESIGLKINELLIVEYYSR 196 >gi|67035590|gb|AAY62726.1| small ribosomal protein subunit 4 [Wilsoniella karsteniana] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +L+ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|313573574|emb|CAT03209.1| ribosomal protein S4 [Touwia laticostata] Length = 196 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLPNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 MVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|121761816|gb|ABM64994.1| ribosomal protein S4 [Plagiomnium arbuscula] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|15639298|ref|NP_218747.1| 30S ribosomal protein S4 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025540|ref|YP_001933312.1| 30S ribosomal protein S4 [Treponema pallidum subsp. pallidum SS14] gi|6094183|sp|O83328|RS4_TREPA RecName: Full=30S ribosomal protein S4 gi|226695095|sp|B2S2Q4|RS4_TREPS RecName: Full=30S ribosomal protein S4 gi|3322583|gb|AAC65295.1| ribosomal protein S4 [Treponema pallidum subsp. pallidum str. Nichols] gi|189018115|gb|ACD70733.1| ribosomal protein S4 [Treponema pallidum subsp. pallidum SS14] Length = 204 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 119/209 (56%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQK 57 M+ + ++ KI RR+G N++G PK + + PG HG ++++K S +G QL+ KQK Sbjct: 1 MAVKR-ARGKIVRRLGINIFGNPKYTRLLGKKPAPPGKEHGVKQRAKVSVYGEQLKEKQK 59 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + YG +SE++FR++F +A R +G T +N++S +E RLD V+R F + ARQ V+ Sbjct: 60 FRFAYG-MSERQFRNLFAQAHRMKGVTGNNMLSLMERRLDNTVFRMGFAISRVQARQMVS 118 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 HR+ L+NG++ NI S R DVI K + + + L++ +++V+ + + A Sbjct: 119 HRYFLINGKTANIPSMRISAHDVITTKNRKGIHSIIRHNLTLSQGQRGSWLNVDEEQLSA 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P + P +VE+YSR Sbjct: 179 TVSELPRAQDIHPVG---NIQHIVEYYSR 204 >gi|37992609|gb|AAR06483.1| small ribosomal protein 4 [Orthostichella pentasticha] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG V Sbjct: 58 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNGCIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 118 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIGLKINELLVVEYYSR 193 >gi|42794652|gb|AAS45723.1| Rps4 [Disterigma pernettyoides] Length = 211 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKGNRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|47606892|gb|AAT36366.1| ribosomal protein subunit 4 [Cyathophorum bulbosum] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMFPTIPGARQLVNHRHILVNGSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K A + + + ++ +P +++ N+ +I L Sbjct: 117 DIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035861|gb|AAY62857.1| small ribosomal protein subunit 4 [Papillidiopsis complanata] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CKIIRRLGTLPGLTNKTPQIKSSS---INQPISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K + + + E+ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNKRKSETIISKNIEFYEKSKIPNHLTYNSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|3122760|sp|O22029|RR4B_CYACA RecName: Full=30S ribosomal protein S4, chloroplastic gi|2541890|dbj|BAA22825.1| ribosomal protein S4 [Cyanidium caldarium] Length = 192 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 17/206 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + ++ RR+G KSP R+ PG H + + K S F +QL+ KQK++ Sbjct: 1 MSRYLGPRVRVIRRLGALPALTNKSP-KKRTIAPGEHAHKTR-KLSEFAVQLQEKQKLQY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG I+ + F++A RS+ T L++ LE+RLD +VYRA F PT+ AARQ VNH H Sbjct: 59 YYG-ITNSQLARYFRQARRSKSSTGLALLTMLETRLDHLVYRAGFAPTLPAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG+ V I S+ C+ VIEVK S Y+ +++ + T Sbjct: 118 VKVNGKKVTIASWACEVNHVIEVKSSSPPKPPEYLPP---------YLQLSNGTLTVT-- 166 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ ++ LVVE+Y+R Sbjct: 167 ---QPVQKEWLAFVVNELLVVEYYTR 189 >gi|260438189|ref|ZP_05792005.1| ribosomal protein S4 [Butyrivibrio crossotus DSM 2876] gi|292809379|gb|EFF68584.1| ribosomal protein S4 [Butyrivibrio crossotus DSM 2876] Length = 197 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 104/207 (50%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R G R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRTLGLDPVYLGIDKKSNRKSG------RANKKVSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ FK A++ G T NL++ LE RLD +++R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYFKRAEKMNGMTGDNLMTLLELRLDNVIFRLGLARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY GD IE+K+K+K + + R VPE++ + DN+ Sbjct: 114 VLVNGKCVNIPSYLVNVGDSIEIKEKAKSSQRYKDILEVTGGRLVPEWLDADQDNLKGVV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS V + L+VE YS+ Sbjct: 174 KAAPSRD---MIDVPVNEMLIVELYSK 197 >gi|46811046|gb|AAT01841.1| small ribosomal protein 4 [Lobatiriccardia lobata] Length = 197 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+P + Y + K S + ++L KQK++ +YG + Sbjct: 1 GPRMKIIRRLGTLPGLTSKTPGSGSGY---IDRSTSSKKISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ LE RLD ++R VPTI AARQ VNH+HV +N Sbjct: 57 TERQLLKYVRVARGAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHQHVSINE 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GDVI ++ ++K L ++ ++P +++ + N + + +I Sbjct: 117 NIVDIPSYNCQPGDVITIRNQAKCRLITERDMNLFQKPEIPNHLAFDSANFLGSINQIID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RN---WIDLKVNELLVVEYYSR 195 >gi|328541074|gb|AEB21761.1| ribosomal protein S4 [Hyalolepidozia microphylla] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGSLPXXXSKTL---KPKPSYNDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQSLKYVRIARRAKGSTGQVLLQSLEMRLDNTIFRLGMASTIPGARQLVNHRHIAINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L + +P Y++ + + + + + Sbjct: 117 VDIPSYNCQPGDIITIRDKQKSQSIITKNVNLFQNLKIPSYLTFDSTKLCGSINQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIDIKINELLVVEYYSR 193 >gi|121761734|gb|ABM64954.1| ribosomal protein S4 [Plagiomnium rostratum] gi|121761736|gb|ABM64955.1| ribosomal protein S4 [Plagiomnium rostratum] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|157887718|emb|CAM33381.1| ribosomal protein S4 [Leptodontium wallisii] Length = 196 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + + +++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINNRKKSQSIITKNIDFSQKSKIPHHLAFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|26421769|gb|AAN78143.1| ribosomal protein S4 [Tortula muralis] gi|26421771|gb|AAN78144.1| ribosomal protein S4 [Tortula muralis] gi|26421775|gb|AAN78146.1| ribosomal protein S4 [Tortula muralis] gi|26421777|gb|AAN78147.1| ribosomal protein S4 [Tortula muralis] gi|26421779|gb|AAN78148.1| ribosomal protein S4 [Tortula muralis] gi|26421787|gb|AAN78152.1| ribosomal protein S4 [Tortula muralis] gi|26421791|gb|AAN78154.1| ribosomal protein S4 [Tortula muralis] gi|26421793|gb|AAN78155.1| ribosomal protein S4 [Tortula muralis] gi|26421795|gb|AAN78156.1| ribosomal protein S4 [Tortula muralis] gi|26421799|gb|AAN78158.1| ribosomal protein S4 [Tortula muralis] gi|26421801|gb|AAN78159.1| ribosomal protein S4 [Tortula muralis] gi|26421803|gb|AAN78160.1| ribosomal protein S4 [Tortula muralis] gi|26421805|gb|AAN78161.1| ribosomal protein S4 [Tortula muralis] gi|26421811|gb|AAN78164.1| ribosomal protein S4 [Tortula muralis] gi|26421813|gb|AAN78165.1| ribosomal protein S4 [Tortula muralis] gi|26421815|gb|AAN78166.1| ribosomal protein S4 [Tortula muralis] gi|26421817|gb|AAN78167.1| ribosomal protein S4 [Tortula muralis] gi|26421819|gb|AAN78168.1| ribosomal protein S4 [Tortula muralis] gi|26421821|gb|AAN78169.1| ribosomal protein S4 [Tortula freibergii] gi|26421823|gb|AAN78170.1| ribosomal protein S4 [Tortula freibergii] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|293634057|gb|ADE60408.1| ribosomal protein subunit 4 [Pogonatum urnigerum] Length = 192 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHKHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|121761722|gb|ABM64948.1| ribosomal protein S4 [Mnium spinulosum] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|121761757|gb|ABM64965.1| ribosomal protein S4 [Plagiomnium undulatum] gi|121761779|gb|ABM64976.1| ribosomal protein S4 [Plagiomnium undulatum] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLKKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|157689492|gb|ABV65302.1| ribosomal protein S4 [Humiria balsamifera] Length = 189 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I S Sbjct: 56 YVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I + + K A + + + ++P++++++ +I Sbjct: 116 YRCKPRDIITARGEQKSRAMIQNYLDSSPQEELPKHLTLHPFQYKGVVNQIIDIK---WI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|63191699|gb|AAY34811.1| small ribosomal protein subunit 4 [Leptostomum inclinans] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKTPNHLTYNSLKKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37548869|gb|AAO32703.1| ribosomal protein 4 [Pogonatum spinulosum] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKIPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQESQDIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992447|gb|AAR06402.1| small ribosomal protein 4 [Camptochaete aciphylla] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|47606932|gb|AAT36386.1| ribosomal protein subunit 4 [Hymenodontopsis mnioides] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIIGKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|291518020|emb|CBK73241.1| SSU ribosomal protein S4P [Butyrivibrio fibrisolvens 16/4] Length = 197 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ ++ K R + + + R R + K S + LQL+ KQK K Sbjct: 1 MAVNKTPVLKRCRSLDLDPTFLGYDKKSRRQK------NRGRGKKSEYALQLQEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +++ADR +G T NL++ LESRLD +V+R F T ARQ V+H+ Sbjct: 55 IYGVL-EKPFRNYYEKADRQKGMTGENLMTMLESRLDNVVFRMGFARTRKEARQVVDHKM 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG++VNI SY K GDVIEV++KSK L + ++ A R VPE+I V+ +N+ T Sbjct: 114 FLVNGKAVNIPSYLVKAGDVIEVREKSKSLQRFKDITEVTAGRMVPEWIDVDAENLKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KELPNREQ---IDVPVDEMLIVELYSK 197 >gi|37992405|gb|AAR06381.1| small ribosomal protein 4 [Acrocladium auriculatum] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 NIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|6137687|pdb|1QD7|C Chain C, Partial Model For 30s Ribosomal Subunit gi|7245451|pdb|1EG0|A Chain A, Fitting Of Components With Known Structure Into An 11.5 A Cryo-Em Map Of The E.Coli 70s Ribosome gi|253722760|pdb|1C05|A Chain A, Solution Structure Of Ribosomal Protein S4 Delta 41, Refined With Dipolar Couplings (Minimized Average Structure) gi|253722761|pdb|1C06|A Chain A, Solution Structure Of Ribosomal Protein S4 Delta 41, Refined With Dipolar Couplings (Ensemble Of 16 Structures) Length = 159 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 69/164 (42%), Positives = 98/164 (59%), Gaps = 5/164 (3%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S +GLQL+ KQK++ YG ++E++FR F+EA + G N + LESRLD +VYR Sbjct: 1 MKLSEYGLQLQEKQKLRHMYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYR 59 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 T ARQ V H H+LV+G VNI SYR K G I V++KS+ L + EA + A Sbjct: 60 LGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANN 118 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+Y+S + + M T+ R+P + P + L+VEFYSR Sbjct: 119 YIPDYLSFDPEKMEGTYTRLPERSE---LPAEINEALIVEFYSR 159 >gi|33413247|emb|CAD86758.1| ribosomal protein small subunit 4 [Micromitrium tenerum] Length = 199 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 9 IRRLGALPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 64 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI Sbjct: 65 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIP 124 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + V++ +++ VP +++ N +I L Sbjct: 125 SYRCKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHES 181 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 182 IGLKINELLVVEYYSR 197 >gi|157689556|gb|ABV65334.1| ribosomal protein S4 [Spiraea tomentosa] Length = 188 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGALPGLTSKKP----RAVSDLRNQSRPGKKSQYRIRLEEKQKLRFHYG-LTEQQLLKY 55 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 56 VRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPQARQLVNHRHILVNGRIVDIPSY 115 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D+I V+ + K A + + R ++P++++++ +I S Sbjct: 116 RCKPRDIITVRDEQKSRALIQNYLDSSPREELPKHLTLHPFQYEGLVNQIIDSK---WVG 172 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 LKINELLVVEYYSR 186 >gi|46810986|gb|AAT01811.1| small ribosomal protein 4 [Allisonia cockaynii] Length = 197 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G L G + ++S +K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGA-LPGLTNKILKSKSGYTNQSVSNKK--ISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L++ Sbjct: 57 TERQLLKYVRIARKAKGSTGRVLLQSLEMRLDNIIFRFGMAPTIPGARQLVNHRHILIDD 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184 +V+I SY CK DVI +K + K + + +++ +P +++ + + ++ Sbjct: 117 ATVDIPSYGCKPRDVITIKNQRKPQSIITRDINSSQKPRIPNHLTFDSTQXRGSVNQMID 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RD---WIDLKINELLVVEYYSR 195 >gi|3098224|gb|AAC15560.1| small ribosomal protein 4 [Rhacocarpus purpurascens] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L+N R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I VK + K A + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITVKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLKKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRELIGLKINELLVVEYYSR 193 >gi|75858220|gb|ABA28684.1| small ribosomal protein 4 [Acrobolbus ciliatus] Length = 191 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKALKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C GD+I VK + K + +++ L ++ +P +++ + + + + Sbjct: 117 SYNCGPGDIITVKNERKSQSMIIKNINLFQKSKMPSHLTFDSTELRGFVNQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|11228660|gb|AAG33115.1| small ribosomal protein 4 [Orthodicranum fulvum] Length = 191 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|63191657|gb|AAY34790.1| small ribosomal protein subunit 4 [Abietinella abietina] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|26421781|gb|AAN78149.1| ribosomal protein S4 [Tortula vahliana] gi|26421783|gb|AAN78150.1| ribosomal protein S4 [Tortula vahliana] gi|26421785|gb|AAN78151.1| ribosomal protein S4 [Tortula vahliana] gi|26421807|gb|AAN78162.1| ribosomal protein S4 [Tortula muralis] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|67035580|gb|AAY62721.1| small ribosomal protein subunit 4 [Oncophorus wahlenbergii] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNDHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|257068798|ref|YP_003155053.1| 30S ribosomal protein S4 [Brachybacterium faecium DSM 4810] gi|256559616|gb|ACU85463.1| SSU ribosomal protein S4P [Brachybacterium faecium DSM 4810] Length = 208 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 10/212 (4%) Query: 1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ ++ ++ R +G L + R Y PG HG+ R+ S + ++L+ KQ++ Sbjct: 1 MTNVTRARRQARLSRALGLPLTPKSVKYFEKRPYPPGEHGRARRRTESDYAVRLKEKQRL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG + EK+ + +A + G T +++ LE RLD +V RA F T ARQ V H Sbjct: 61 RAQYG-LREKQMHRAYLDAKKEPGLTGESMVELLEMRLDALVLRAGFARTTLQARQAVVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDN 174 RHVLV+G+ V+ S+R G I++K KS+ + A++ DV P Y+SV Sbjct: 120 RHVLVDGKLVDRPSFRVAPGQTIQIKPKSQAMEPFQIAAEGGNSDVLASTPSYLSVELPE 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A V P + PV + +VVE+Y+R Sbjct: 180 LKAQLVSRPKRAE---VPVTVDVQMVVEYYAR 208 >gi|121761827|gb|ABM64999.1| ribosomal protein S4 [Plagiomnium integrum] gi|121761843|gb|ABM65007.1| ribosomal protein S4 [Plagiomnium integrum] gi|121761849|gb|ABM65010.1| ribosomal protein S4 [Plagiomnium integrum] gi|121761851|gb|ABM65011.1| ribosomal protein S4 [Plagiomnium integrum] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|49182803|gb|AAT57863.1| small ribosomal protein [Symphyogyna brongniartii] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G L G + + S +K S + ++L KQK++ +YG ++E Sbjct: 1 RAKIIRRLGA-LPGLSHEMIGSGSVYTNQLAANKK--ISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH++VN + Sbjct: 57 RQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIVVNDDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK DVI ++ + + + + + L ER +P +++ + + +I Sbjct: 117 VDIPSYNCKPQDVITIRDRRESQSVITQNISLFRERRIPNHLTFDSTRFCGSVNQIIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIGLKINELLVVEYYSR 193 >gi|3098202|gb|AAC15549.1| small ribosomal protein 4 [Tetraplodon mnioides] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSST---NQSTANKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN R Sbjct: 57 RQLLNYVRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|49182774|gb|AAT57849.1| small ribosomal protein [Symphyogyna sp. CD67] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G L G + +RS +K S + ++L KQK++ +YG ++E Sbjct: 1 RGKIIRRLGA-LPGLSXEMIGSRSGYINQLAANKK--ISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH++VN + Sbjct: 57 RQLLKYVRIARGAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVNDDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK DVI ++ + + + + + L ER +P +++ + + +I Sbjct: 117 VDIPSYNCKPQDVITIRDRRESQSVITKNINLFRERRIPNHLTFDSTRFCGSVNQIIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIGLKINELLVVEYYSR 193 >gi|24473832|gb|AAL82760.1| small ribosomal subunit protein 4 [Plagiobryum purpurascens] Length = 198 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIKRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SYRCK D I +K + K + + L ++ P +++ N +I Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQTIISKNLNLYQKYKKPNHLTYNFLKKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|239932411|ref|ZP_04689364.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672] gi|291440777|ref|ZP_06580167.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672] gi|291343672|gb|EFE70628.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672] Length = 204 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A ++ T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-VSERQLVRAYERAAKTTMKTGDALVIELERRLDALVLRSGIARTIYQARQMVTHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG+ V+ S+R + DV++V+ +SK A + + + P Y+ VN + Sbjct: 119 IQVNGKKVDKPSFRVRPDDVVQVRDRSKDKTLFQIAREGGFAPDGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVEFY+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEFYAR 204 >gi|225550541|ref|ZP_03771490.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379695|gb|EEH02057.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 202 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 12/209 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ S +K RR+G +L K R+YGPG HG +K K S +G QL KQK+ Sbjct: 1 MSRYTGSIYKKSRRLGFSLLENNKEFNSGKKRTYGPGQHGN-KKVKLSNYGQQLVEKQKL 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +++++FR +++ A G + NL+ LESRLD++VYRA F PT AARQ VNH Sbjct: 60 MFLYG-LNDRQFRRLYRVALGRPGVLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVA 177 HVLVNG+ VNI S + G I +K+KS ++ + ++I + D VA Sbjct: 119 SHVLVNGKKVNIPSALVEVGSTIALKEKSLEMPLIKNTLNKPA----DFIELFDKDKKVA 174 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + VVE+Y+R Sbjct: 175 KLSRLPERSE---LPADVNEAYVVEWYNR 200 >gi|121761886|gb|ABM65028.1| ribosomal protein S4 [Orthomnion dilatatum] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ ++P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYEIPNHLTYNSLNKKGLVNQILDRN 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|63191701|gb|AAY34812.1| small ribosomal protein subunit 4 [Pulchrinodus inflatus] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAIITKNIDFYQKYKIPNHLTYNSLKKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63191706|gb|AAY34814.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIDLKINELLVVEYYSR 192 >gi|63191791|gb|AAY34855.1| small ribosomal protein subunit 4 [Tetrodontium brownianum] Length = 194 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K+P + Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKVIRRLGVLPGLTIKTPQSKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V Sbjct: 57 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILVNNHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ VP ++++N ++ L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQNIIAKNIDFSQKYKVPNHLTLNSSQKKGLINQV---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|227345121|gb|ACP28113.1| small ribosomal protein 4 [Chiloscyphus lentus] Length = 191 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|121761759|gb|ABM64966.1| ribosomal protein S4 [Plagiomnium affine] gi|121761761|gb|ABM64967.1| ribosomal protein S4 [Plagiomnium affine] Length = 195 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|145848877|emb|CAJ91115.1| ribosomal protein S4 [Acrocladium auriculatum] Length = 196 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVSIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K K K A + + + ++ +P +++ + +I Sbjct: 117 IVNIPSYRCKPQDFITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|42556414|gb|AAS19802.1| small ribosomal protein 4 [Gackstroemia magellanica] Length = 191 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKILKLKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ TI ARQ VNHRH+ +N +VNI Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMASTIPGARQLVNHRHISINNETVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I ++ K + + + ++P +++ + + + +I Sbjct: 117 SYNCKPGDIITIRNSEKSQSIITTNMNSFHKSEIPNHLTFDSTQLRGSINKIIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VDLKVNELLVVEYYSR 189 >gi|83416504|gb|ABC18272.1| small ribosomal subunit protein 4 [Homalothecium sericeum] Length = 196 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 MVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|269123124|ref|YP_003305701.1| 30S ribosomal protein S4 [Streptobacillus moniliformis DSM 12112] gi|268314450|gb|ACZ00824.1| ribosomal protein S4 [Streptobacillus moniliformis DSM 12112] Length = 195 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R+ P K + +G QLR KQK + Sbjct: 1 MARDRQPILKKCRTLGLDPSILGVNKKSKRNIRP-----NANKKLTEYGTQLREKQKARF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F +++EA R G T L+ +LE RLD ++YR F T ARQ V+H H Sbjct: 56 VYG-VMEKQFYKLYEEATRKEGVTGELLLQYLERRLDNVIYRLGFGSTRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L+NG+ V+I SYR K+GDVI +K+ S +L+ + E+ ++ VP ++S+ + A + Sbjct: 115 ILINGKRVDIASYRVKQGDVITLKEGSTELSIIKESV--GQKSVPGWLSLEEGTLTAKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ + +++EFYSR Sbjct: 173 ENPTRDA---VDFEINEAMIIEFYSR 195 >gi|121761771|gb|ABM64972.1| ribosomal protein S4 [Plagiomnium succulentum] gi|121761773|gb|ABM64973.1| ribosomal protein S4 [Plagiomnium succulentum] gi|121761777|gb|ABM64975.1| ribosomal protein S4 [Plagiomnium succulentum] Length = 195 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|63078636|gb|AAY29404.1| ribosomal protein S4 [Tortella tortuosa] Length = 196 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PXVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFQIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|42556430|gb|AAS19810.1| small ribosomal protein 4 [Isotachis armata] Length = 191 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD I V+ + K + + + L +P +++ + + + + Sbjct: 117 SYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLQGFVNQTINR---EL 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|28194669|gb|AAO33596.1|AF480951_1 ribosomal protein S4 [Didymodon luridus] Length = 196 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P + + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSNST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + ++ +P ++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFFQKSKIPNHLIFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|121761877|gb|ABM65024.1| ribosomal protein S4 [Plagiomnium confertidens] Length = 195 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|121761726|gb|ABM64950.1| ribosomal protein S4 [Plagiomnium ellipticum] gi|121761728|gb|ABM64951.1| ribosomal protein S4 [Plagiomnium ellipticum] gi|121761746|gb|ABM64960.1| ribosomal protein S4 [Plagiomnium ellipticum] gi|121761769|gb|ABM64971.1| ribosomal protein S4 [Plagiomnium ellipticum] gi|121761869|gb|ABM65020.1| ribosomal protein S4 [Plagiomnium ellipticum] Length = 195 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|26421757|gb|AAN78137.1| ribosomal protein S4 [Tortula muralis] gi|26421759|gb|AAN78138.1| ribosomal protein S4 [Tortula muralis] gi|26421761|gb|AAN78139.1| ribosomal protein S4 [Tortula muralis] gi|26421763|gb|AAN78140.1| ribosomal protein S4 [Tortula muralis] gi|26421765|gb|AAN78141.1| ribosomal protein S4 [Tortula muralis] gi|26421767|gb|AAN78142.1| ribosomal protein S4 [Tortula muralis] Length = 195 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|63191883|gb|AAY34901.1| small ribosomal protein subunit 4 [Ganguleea angulosa] Length = 194 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 CKNIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNRLV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SY CK D I +K + K A + + +++ VP +++ N +I L Sbjct: 117 NIPSYCCKPQDFITIKDRQKSQALITKYIDFSQKSKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|157689508|gb|ABV65310.1| ribosomal protein S4 [Krameria lanceolata] Length = 193 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRPRAR----TDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V Sbjct: 56 QLVKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDCIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I K K K + + ++P+++++N +I +S Sbjct: 116 DIPSYRCKPRDIITAKDKQKSRTLIQNYLDSSPHEELPKHLTINPLQYKGLVNQIIASK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --WVSLKINELLVVEYYSR 191 >gi|328541044|gb|AEB21746.1| ribosomal protein S4 [Hygrolembidium rigidum] Length = 195 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K Y K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE R D ++R TI ARQ VNHRH+ +N Sbjct: 57 RQSLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +++K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSIDQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ESINLKINELLVVEYYSR 193 >gi|67035704|gb|AAY62783.1| small ribosomal protein subunit 4 [Schistidium apocarpum] Length = 194 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HESIGLKINELLVVEYYSR 192 >gi|42556482|gb|AAS19836.1| small ribosomal protein 4 [Plagiochila asplenioides] Length = 191 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTLKSKSSYSD---RSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N VNI Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHITINNDIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I + K K + V + ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|80974178|gb|ABB53782.1| small ribosomal subunit protein 4 [Ptychomniella ptychocarpa] Length = 198 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + + + + ++ +P +++ + +I Sbjct: 117 DYIVDIPSYRCKPQDFIIIKNQQNFEIVINKNTDFYQKYKIPNHLTYSSLEKKGLVNKI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|121761718|gb|ABM64946.1| ribosomal protein S4 [Plagiomnium rostratum] Length = 195 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|28194833|gb|AAO33678.1|AF481033_1 ribosomal protein S4 [Barbula ehrenbergii] Length = 196 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRLRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K V + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRKKSQVMVTKNLNFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|86438874|emb|CAJ55408.1| small ribosomal protein 4 [Plagiochila andina] Length = 192 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNH+H Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPN 198 ++ + + + Sbjct: 177 NQMINR---EWTNLKINEL 192 >gi|26421797|gb|AAN78157.1| ribosomal protein S4 [Tortula muralis] Length = 195 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|28194687|gb|AAO33605.1|AF480960_1 ribosomal protein S4 [Leptophascum leptophyllum] Length = 196 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K A + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQAMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLEINELLVVEYYSR 194 >gi|24473828|gb|AAL82757.1| small ribosomal subunit protein 4 [Rhodobryum keniae] Length = 196 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKIPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 IVNIPSYRCKPEDSITIKDRPKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|63078650|gb|AAY29411.1| ribosomal protein S4 [Triquetrella tristicha] Length = 197 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K P S + K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 RIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195 >gi|11228633|gb|AAG33102.1| small ribosomal protein 4 [Dicranum condensatum] Length = 191 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I ++ + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|146261575|gb|ABQ15097.1| ribosomal protein S4 [Myriophyllum sp. Broch s.n.] Length = 190 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 MRRLGALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLL 55 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 56 KYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIP 115 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I K + K A + L+ ++P+++++ +I Sbjct: 116 SYRCKPRDIITAKDEQKSRAMIQNYLDLSPHEELPKHLTLQPFQYKGLVNQIIDKN---W 172 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 VGLKINELLVVEYYSR 188 >gi|49182702|gb|AAT57813.1| small ribosomal protein [Dumortiera hirsuta] Length = 194 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+ + Y ++ K S + ++L KQK++ +YG ++E+ Sbjct: 1 VKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+L+N +V Sbjct: 57 QLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTSTIPGARQLVNHRHILINNNTV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY CK DVI +K +SK + + + ++ +P +++ + + +I Sbjct: 117 DIPSYNCKPKDVITIKDRSKSQSIITKNLNSFQKQKIPNHLAFDLMQIKGIVNQIIDR-- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 -EWISLKINELLVVEYYSR 192 >gi|227345123|gb|ACP28114.1| small ribosomal protein 4 [Chiloscyphus leucophyllus] Length = 191 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQLLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + +I + Sbjct: 117 SYNCEPGDIITIRDKHKSQSMITKNINLFQKLKIPSHLTFDSIKLQGSVNQIINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|302561720|ref|ZP_07314062.1| 30S ribosomal protein S4 [Streptomyces griseoflavus Tu4000] gi|302479338|gb|EFL42431.1| 30S ribosomal protein S4 [Streptomyces griseoflavus Tu4000] Length = 204 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ ++ A ++ T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQLVRAYERAAKTSMKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG+ V+ S+R + DV++V+++SK+ A + + ++P Y+ VN ++ Sbjct: 119 IQVNGKKVDKPSFRVRPDDVVQVRERSKEKTLFTIAREGGFAPDGEIPRYLQVNLKSLAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204 >gi|227871775|ref|ZP_03990180.1| ribosomal protein S4 [Oribacterium sinus F0268] gi|227842376|gb|EEJ52601.1| ribosomal protein S4 [Oribacterium sinus F0268] Length = 197 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 15/209 (7%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ + K R +G + G K + K S +GLQLR KQK Sbjct: 1 MAVDKVPVLKRCRSLGLDPVFLGVDKKSNRQLRNP--------RRKMSEYGLQLREKQKA 52 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + EK FR+ + +A++ G T NL+ LESRLD +++R T ARQ V H Sbjct: 53 KFIYGVL-EKPFRNYYAKAEKLAGQTGENLMVLLESRLDNVIFRMGMARTRREARQVVGH 111 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 RHV VNG+ VNI SY GDVI++K+ + + ++ R VP ++ ++ + + A Sbjct: 112 RHVTVNGKIVNIPSYLVSAGDVIQIKESMRTAQRYKDIVEVTNGRMVPAWLEMDAEKLSA 171 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T +P +D+ PV L+VE YS+ Sbjct: 172 TIKSLPHR-EDIDVPV--NEMLIVELYSK 197 >gi|157785980|gb|ABV74164.1| small ribosomal protein 4 [Dendrohypopterygium filiculiforme] Length = 196 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGALPGLTNKTPQLKSNL---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDY 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + + + ++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSESIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKVNELLVVEYYSR 194 >gi|18920733|gb|AAL82411.1| ribosomal protein system 4 [Catagonium nitens] Length = 195 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67036088|gb|AAY62970.1| small ribosomal protein subunit 4 [Tripterocladium leucocladulum] Length = 194 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992451|gb|AAR06404.1| small ribosomal protein 4 [Camptochaete vaga] Length = 194 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|22854715|gb|AAN09777.1| small ribosomal protein 4 [Kiaeria starkei] Length = 191 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K +++ +++ VP +++ + +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQTMIIKNVDFSQKAKVPNHLTFHSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|37992569|gb|AAR06463.1| small ribosomal protein 4 [Lembophyllum divulsum] Length = 194 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|18920759|gb|AAL82424.1| ribosomal protein system 4 [Orthothecium chryseum] Length = 194 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|18920739|gb|AAL82414.1| ribosomal protein system 4 [Herzogiella cylindricarpa] Length = 197 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 58 ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILVNDC 117 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 LDRESIGLKINELLVVEYYSR 195 >gi|20531120|gb|AAM27380.1| ribosomal protein 4 [Timmia megapolitana] Length = 191 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNDHIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|160941043|ref|ZP_02088381.1| hypothetical protein CLOBOL_05936 [Clostridium bolteae ATCC BAA-613] gi|158435992|gb|EDP13759.1| hypothetical protein CLOBOL_05936 [Clostridium bolteae ATCC BAA-613] Length = 197 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R +R K S +G+QLR KQK K Sbjct: 1 MAVDRVPVLKRCRSLGLDPIYLGIDKKSNRES------KRTNKKLSEYGMQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A + G NL+ LE RLD +++R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKASKMNGMVGTNLMILLECRLDNVLFRMGLGRTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI SYR K GDVIEVK+K K + + R VP ++ V+ +N+ T Sbjct: 114 ILVNGKPVNIPSYRVKAGDVIEVKEKYKSAQRYKDVLEVTGGRMVPAWLDVDQENLRGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KEMPTRDE---IDVPVNEMLIVELYSK 197 >gi|33413193|emb|CAD86732.1| ribosomal protein small subunit 4 [Dicranum fuscescens] Length = 191 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I ++ + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKFKIPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|17025814|gb|AAL32074.1| ribosomal protein 4 [Syrrhopodon trachyphyllus] Length = 198 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLSGLTNKTPQLKSSS---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D I +K + K +++ + ++ P ++ N +I Sbjct: 117 NRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTSFFSKHKTPNHLIFNSVEKKGFVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196 >gi|28194799|gb|AAO33661.1|AF481016_1 ribosomal protein S4 [Tortula muralis] Length = 196 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI R +G K P + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRPLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|28194741|gb|AAO33632.1|AF480987_1 ribosomal protein S4 [Pottia pallida] Length = 196 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGALPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + ++ K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|26421809|gb|AAN78163.1| ribosomal protein S4 [Tortula muralis] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DPESIGLKINELLVVEYYSR 193 >gi|42556448|gb|AAS19819.1| small ribosomal protein 4 [Lepidolaena clavigera] Length = 191 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGTLPGLTSKKIKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHILINNETVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ + K + + + + ++P ++++N + + Sbjct: 117 SYNCEPGDIITIRNREKSQSIITKNINSFHKSEIPNHLTLNSTQLRGSINTTIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKVNELLVVEYYSR 189 >gi|228480563|gb|AAY62914.2| small ribosomal protein subunit 4 [Loeskeobryum brevirostre] Length = 194 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D J +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFJTIKNQQKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|121761712|gb|ABM64943.1| ribosomal protein S4 [Plagiomnium undulatum] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INPSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLKKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|37992511|gb|AAR06434.1| small ribosomal protein 4 [Euptychium robustum] Length = 198 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITEQQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTISGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I VK + + + ++ +P +++ +I Sbjct: 117 DCIVNIPSYRCKPQDFIIVKNEKNSEEVINKDGDFHQKSKIPNHLTYIFLEKKGLVNKI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|49182799|gb|AAT57861.1| small ribosomal protein [Sphaerocarpos texanus] Length = 192 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+ Y ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGALPGLTNKTLKTKSGY---INQSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N +V+I Sbjct: 57 LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNTVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK DVI +K + K + + + ++ +P ++S + +I Sbjct: 117 PSYSCKPKDVITIKDRQKSQSIITKNINSFQKPKIPNHLSFDLIQFKGLVNQIIDR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIYLKINELLVVEYYSR 190 >gi|28194835|gb|AAO33679.1|AF481034_1 ribosomal protein S4 [Barbula indica] gi|28194837|gb|AAO33680.1|AF481035_1 ribosomal protein S4 [Barbula ehrenbergii] gi|28194839|gb|AAO33681.1|AF481036_1 ribosomal protein S4 [Barbula ehrenbergii] Length = 196 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKTPHLKSSS---INQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K V + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPEDFITIKDRKKSQVMVTKNLNFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|157785984|gb|ABV74166.1| small ribosomal protein 4 [Hypopterygium didictyon] Length = 196 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG Sbjct: 57 ERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNGY 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFINIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LNRESIGLKINELLVVEYYSR 194 >gi|222103412|gb|ACM44235.1| small ribosomal protein subunit 4 [Tetraphis pellucida] gi|222103414|gb|ACM44236.1| small ribosomal protein subunit 4 [Tetraphis pellucida] Length = 194 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLKYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P ++++N ++ L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 REFIDLKINELLVVEYYSR 192 >gi|20531092|gb|AAM27367.1| ribosomal protein 4 [Muscoflorschuetzia pilmaiquen] Length = 191 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 3 RLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 59 VRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RC+ D I +K + K +++ +++ +P +++ + +I L Sbjct: 119 RCQPQDFITIKDRQKSQGIIVKNMDFSQKYKIPNHLTFDSLEKKGVVNQI---LDRESIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|67035730|gb|AAY62796.1| small ribosomal protein subunit 4 [Physcomitrella patens] Length = 186 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S Q K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V+I SYRC Sbjct: 56 IARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I VK + K A + + +++ VP +++ + +I L + Sbjct: 116 KPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRESIGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|11228662|gb|AAG33116.1| small ribosomal protein 4 [Pleuridium acuminatum] gi|33413217|emb|CAD86743.1| ribosomal protein small subunit 4 [Pleuridium acuminatum] Length = 190 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQKSQAMIIKNIDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|227345113|gb|ACP28109.1| small ribosomal protein 4 [Archeophylla schusteri] Length = 191 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 2 RRLGALPGLISKTLKLKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD ++R TI ARQ VNH H+ +N V+I S Sbjct: 58 YVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINNFIVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C GDVI V+ K K + + + L + ++P +++++ + + + + Sbjct: 118 YNCAPGDVITVRNKQKSRSIITKNINLLQNSEIPNHLTLDSTQLRGSINQTINR---EWI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 HLKINELLVVEYYSR 189 >gi|26421773|gb|AAN78145.1| ribosomal protein S4 [Tortula muralis] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLSNKIPPLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSKVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|18920779|gb|AAL82434.1| ribosomal protein system 4 [Platydictya jungermannioides] Length = 194 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + +++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKNKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|3098152|gb|AAC15524.1| small ribosomal protein 4 [Ptychomitrium gardneri] Length = 194 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A V++ ++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQNYKVPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 HGSIGLKINELLVVEYYSR 192 >gi|67035863|gb|AAY62858.1| small ribosomal protein subunit 4 [Potamium lonchophyllum] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G L K+P S ++ K S + ++L KQK++ YYG I+E+ Sbjct: 2 VKIIRRLGTLLGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFYYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 58 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNSMV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + E+ +P +++ N +I L Sbjct: 118 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYEKSKIPNHLTYNSLEKKGLINKI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIGLKINELLVVEYYSR 193 >gi|63101063|gb|AAY33156.1| small ribosomal protein 4 [Pilotrichopsis dentata] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VNIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|20531109|gb|AAM27375.1| ribosomal protein 4 [Bryum caespiticium] Length = 193 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I Sbjct: 58 LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + ++ +P +++ N N I L Sbjct: 118 PSYRCKPQDFITIKDQQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNXI---LDRE 174 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 SIDLKINELLVVEYYSR 191 >gi|121761714|gb|ABM64944.1| ribosomal protein S4 [Plagiomnium insigne] gi|121761716|gb|ABM64945.1| ribosomal protein S4 [Plagiomnium insigne] gi|121761720|gb|ABM64947.1| ribosomal protein S4 [Plagiomnium insigne] gi|121761740|gb|ABM64957.1| ribosomal protein S4 [Plagiomnium insigne] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|67035622|gb|AAY62742.1| small ribosomal protein subunit 4 [Dicnemon seriatum] Length = 194 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A +++ +++ VP +++ + +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|118626057|emb|CAL41749.1| small ribosomal protein 4 [Southbya gollanii] Length = 192 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQ+++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTSKTLKLKSSY---IDRSVSNKKVSQYRIRLEEKQRLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNH H+ +N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQSVNHGHISINNSIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I V+ K K + + + L ++ + P +++ + + + + + Sbjct: 117 SYDCEPGDIITVRNKRKSQSVITKNINLFKKLETPSHLTFDSTELRGSVDQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|18920771|gb|AAL82430.1| ribosomal protein system 4 [Plagiothecium latebricola] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|121761754|gb|ABM64964.1| ribosomal protein S4 [Plagiomnium elatum] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I + Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILNRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|37960605|gb|AAP70672.1| small ribosomal protein 4 [Flatbergium sericeum] Length = 195 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTNKTPQSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + + ++ P +++++ +I Sbjct: 118 NIPSYRCKPRDFITIKDRQKSRSIITRSLDYSQSYKTPNHLTLDSLQKKGLVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|224179500|ref|YP_002601030.1| ribosomal protein S4 [Monomastix sp. OKE-1] gi|217314543|gb|ACK36886.1| ribosomal protein S4 [Monomastix sp. OKE-1] Length = 208 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G+ + + ++ PG HG R K S + ++L+ KQK++ Sbjct: 1 MSRYRGPRLRITRRLGDLPGLVNTAKSSGKTTLPGQHGGSRPQKASQYSIRLKEKQKLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E + K+A +G T ++ LE RLD+IV+R+ PT+ AARQ V+H H Sbjct: 61 NYG-VNESQLVRYVKKARNMKGSTGELVLQLLEMRLDSIVFRSGLAPTLRAARQLVSHGH 119 Query: 121 VLVNGR-----------SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 + + + VNI SY+C+ GD + + A + +P +I Sbjct: 120 IAIETKTSQNKTENSFLPVNIPSYQCRPGDNVRLINLPTGEAR-------SSTSLPAHIH 172 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + ++ + + L++E+YSR Sbjct: 173 FDNASKSYQVKQLIPRSE---VSCSVNELLIIEYYSR 206 >gi|37992611|gb|AAR06484.1| small ribosomal protein 4 [Orthostichella pentasticha] Length = 192 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNGCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|18920799|gb|AAL82444.1| ribosomal protein system 4 [Trachythecium verrucosum] Length = 197 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 58 ERQLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I YRCK D+I +K + K + + + +R +P +++ + +I Sbjct: 118 IVDISGYRCKPQDLITIKNQQKSETIINKNIEFYQRFKIPNHLTYSSLEKKGLVNQILDR 177 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 178 Q---SIGLKINELLIVEYYSR 195 >gi|47606908|gb|AAT36374.1| ribosomal protein subunit 4 [Leptotheca gaudichaudii] Length = 194 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|328488176|gb|AEB19901.1| small ribosomal protein 4 [Schistochila lehmanniana] Length = 191 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKTPKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNKQKSQSMITRNLNLLQKPKIPNHLTFDPTQLRGLVNQ---RVHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|7576773|gb|AAF63983.1| small ribosomal protein 4 [Polytrichadelphus magellanicus] Length = 192 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D + +K + + A + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFVTIKNRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LNRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|283781653|ref|YP_003372408.1| 30S ribosomal protein S4 [Pirellula staleyi DSM 6068] gi|283440106|gb|ADB18548.1| ribosomal protein S4 [Pirellula staleyi DSM 6068] Length = 202 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K +++RR+G ++ + R PG+H + R+ S +G+ KQK+ Sbjct: 1 MARYHGPKARVNRRLGALIYEAAGAARALERRDNPPGMHIKGRR--LSNWGMASAEKQKI 58 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YYG + E++ R + +G+T L++ E RLD +V RA + T ARQ + H Sbjct: 59 KHYYG-LGERQLRKYYHMVAAKKGNTGEQLLTLCERRLDNVVRRAGYTKTRPQARQGIVH 117 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H VNG V SY+ + GDVI ++ K PE+++ + +++ AT Sbjct: 118 GHFFVNGVKVTSPSYQLRPGDVITIRPKEAIYGLYKGVCDNHAPQTPEWLTFDSESLRAT 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + IP D PV + VVEF SR Sbjct: 178 MMGIPGPG-DYSLPVNVDI--VVEFLSR 202 >gi|239623374|ref|ZP_04666405.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522340|gb|EEQ62206.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 197 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R +R K S +G+QLR KQK K Sbjct: 1 MAVDRVPVLKRCRSLGLDPVYLGIDKKSNRES------RRTNKKLSEYGMQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A + G NL+ LE RLD +++R T RQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKASKMNGMVGTNLMILLECRLDNVLFRMGLGRTRKETRQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI SY+ K GDVIEV++K K + + R P ++ V+ +N+ T Sbjct: 114 ILVNGKPVNIPSYQVKAGDVIEVREKYKSAQRYKDILEVTGGRLTPAWLEVDQENLRGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KEMPTRDE---IDVPVNEMLIVELYSK 197 >gi|63101045|gb|AAY33147.1| small ribosomal protein 4 [Baldwiniella kealeensis] Length = 194 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLKKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035664|gb|AAY62763.1| small ribosomal protein subunit 4 [Trichodon cylindricus] Length = 194 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNVNFSQKSKVPNHLTFNSLENKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|50235324|gb|AAT70695.1| Rps4 [Plasteurhynchium meridionale] Length = 195 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|160932173|ref|ZP_02079564.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753] gi|156868775|gb|EDO62147.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753] Length = 200 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K +G + G K N G + + K + LQL KQK+ Sbjct: 1 MAKNMQPIAKRCHALGISPTVMGYSKKTTNRNP------GGQMRKKKGEYALQLAEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I E++FRS +++A R G NL+ +E RLD +VYR F T ARQ VNH Sbjct: 55 KFVYG-ILERQFRSYYEKATRMPGKAGENLLILVERRLDNVVYRLGFASTRRDARQLVNH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176 H VNG+ VNI SY K GDVIEV + S+ + VP ++ ++ Sbjct: 114 GHFTVNGKRVNIPSYLVKPGDVIEVAETSRSSVKFSKLTGEDAPMVTVPRWLEREKSSLK 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ +D+ PV + +L+VE YS+ Sbjct: 174 GVVAAMPAR-EDIDLPV--EEHLIVELYSK 200 >gi|151370786|gb|ABS11011.1| ribosomal protein subunit 4 [Dendro-hypnum reinwardtii] Length = 194 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G L K+ S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 KIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+ Sbjct: 58 LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVD 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 118 IPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI---LDR 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 175 ESIGLKINELLIVEYYSR 192 >gi|78102639|gb|ABB21533.1| small ribosomal protein 4 [Plagiochila cymbiformis] gi|78102645|gb|ABB21536.1| small ribosomal protein 4 [Plagiochila duricaulis] gi|78102683|gb|ABB21555.1| small ribosomal protein 4 [Plagiochila latifrons] Length = 189 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|20531059|gb|AAM27352.1| ribosomal protein 4 [Buxbaumia piperi] Length = 193 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K P Y + K S + ++L KQK++ +YG I+E++ Sbjct: 1 KIIRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VN Sbjct: 57 LLKYVRIARAAKGSTGQILLQSLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNHIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K K + + +L++R +P ++++N +I L Sbjct: 117 IPSYRCKPQDFITIKNSQKSPTIITKNIELSQRYQIPNHLTLNSLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|63191685|gb|AAY34804.1| small ribosomal protein subunit 4 [Leptodictyum riparium] gi|63191687|gb|AAY34805.1| small ribosomal protein subunit 4 [Warnstorfia exannulata] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S L+ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|227345117|gb|ACP28111.1| small ribosomal protein 4 [Chiloscyphus austrigenus] Length = 191 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDLIKLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|22854703|gb|AAN09771.1| small ribosomal protein 4 [Distichium capillaceum] Length = 189 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A +++ + +++ VP +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIIIKNIEFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|49182805|gb|AAT57864.1| small ribosomal protein [Targionia hypophylla] Length = 195 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + Y ++ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 RQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNP 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SY CK D+I +K + K + + ++ +P +++ + + +I Sbjct: 117 IDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLVQVKGLVNQIIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIYLKINELLVVEYYSR 193 >gi|42556490|gb|AAS19840.1| small ribosomal protein 4 [Ptilidium pulcherrimum] Length = 191 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N +VNI Sbjct: 57 KYVCIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K + K + + L ++ +P +++ + + + ++ Sbjct: 117 SYNCKPGDIITIKNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSVNQMIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IHLKINELLVVEYYSR 189 >gi|17025851|gb|AAL32091.1| ribosomal protein 4 [Mitthyridium sp. Wall 3637] Length = 199 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 ++ KI RR+G K P + ++ K S + ++L KQK++ +YG ++ Sbjct: 4 ARVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LT 59 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 60 ERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNN 119 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I Sbjct: 120 IVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI--- 176 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 LDHESIGLKINELLVVEYYSR 197 >gi|27227947|gb|AAN85771.1| ribosomal protein subunit 4 [Plagiobryum orthothecium] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 NIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67036066|gb|AAY62959.1| small ribosomal protein subunit 4 [Gollania philippinensis] Length = 195 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67035746|gb|AAY62804.1| small ribosomal protein subunit 4 [Polymerodon andinus] Length = 197 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGXLPGLTXKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGZVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNB 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 R VBI SYRCK D I K + K + + ++ P +++ N +I Sbjct: 117 RXVBIPSYRCKPQDFITXKDRQKSQXXIXKNIDFYQKYKXPNHLTXNSLXKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDXESIXLKINELLVVEYYSR 195 >gi|63101069|gb|AAY33159.1| small ribosomal protein 4 [Muellerobryum whiteleggei] Length = 195 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|293634047|gb|ADE60403.1| ribosomal protein subunit 4 [Pogonatum nipponicum] Length = 191 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|28194681|gb|AAO33602.1|AF480957_1 ribosomal protein S4 [Syntrichia ammonsiana] Length = 195 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S+ + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKIPHLKSSFT---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NQESIGLKINELLVVEYYSR 193 >gi|328541064|gb|AEB21756.1| ribosomal protein S4 [Kurzia trichoclados] Length = 198 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR G K+ Y K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRXGGXPGLXSKTVKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPXARQLVNHRHISINX 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ D+I +++K K + V + L + +P +++ + + + + + Sbjct: 117 DIVDIPSYNCEPDDIITIREKQKSQSVVTKNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---ESIDLKINELLVVEYYSR 195 >gi|28194729|gb|AAO33626.1|AF480981_1 ribosomal protein S4 [Syntrichia ruralis] gi|28194829|gb|AAO33676.1|AF481031_1 ribosomal protein S4 [Syntrichia intermedia] gi|33413245|emb|CAD86757.1| ribosomal protein small subunit 4 [Syntrichia ruralis] Length = 196 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|63101057|gb|AAY33153.1| small ribosomal protein 4 [Symphysodon longicuspis] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K + + + ++ +P +++ ++ +I L Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETMISKNIEFYQKYKIPNHLTYSYLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|309785618|ref|ZP_07680249.1| ribosomal protein S4 [Shigella dysenteriae 1617] gi|308926738|gb|EFP72214.1| ribosomal protein S4 [Shigella dysenteriae 1617] gi|313647394|gb|EFS11846.1| ribosomal protein S4 [Shigella flexneri 2a str. 2457T] gi|323164860|gb|EFZ50651.1| ribosomal protein S4 [Shigella sonnei 53G] gi|332086274|gb|EGI91430.1| ribosomal protein S4 [Shigella dysenteriae 155-74] Length = 154 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 65/158 (41%), Positives = 100/158 (63%), Gaps = 5/158 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QLR KQK+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T Sbjct: 1 MQLREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATR 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168 ARQ V+H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ Sbjct: 60 AEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWL 119 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+ M TF R P + +L+VE YS+ Sbjct: 120 EVDAGKMEGTFKRKPERSD---LSADINEHLIVELYSK 154 >gi|33413201|emb|CAD86736.1| ribosomal protein small subunit 4 [Paraleucobryum longifolium] Length = 191 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I ++ + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|29027204|gb|AAN47164.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027206|gb|AAN47165.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027208|gb|AAN47166.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027210|gb|AAN47167.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027212|gb|AAN47168.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027214|gb|AAN47169.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027216|gb|AAN47170.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027218|gb|AAN47171.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027222|gb|AAN47173.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027224|gb|AAN47174.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027226|gb|AAN47175.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027228|gb|AAN47176.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027230|gb|AAN47177.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027232|gb|AAN47178.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027234|gb|AAN47179.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027236|gb|AAN47180.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027238|gb|AAN47181.1| small ribosomal protein 4 [Hymenodontopsis mnioides] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIGKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|327479347|gb|AEA82657.1| 30S ribosomal protein S4 [Pseudomonas stutzeri DSM 4166] Length = 167 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 66/172 (38%), Positives = 103/172 (59%), Gaps = 6/172 (3%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 +HGQ R+ + S +G QLR KQK+++ YG + E++F +KEA +G T NL+ LE R Sbjct: 1 MHGQ-RRGRLSDYGTQLREKQKVRRIYGVL-ERQFSGYYKEAASRKGATGENLLQLLECR 58 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +VYR F T +RQ V+H+ + VNG++VNI SY+ K GDV+ V++K + + + Sbjct: 59 LDNVVYRMGFGSTRAESRQLVSHKSITVNGQTVNIPSYQVKAGDVVAVREKCRNQLRIAQ 118 Query: 156 ASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A +L A+R E++ V+ D F +P+ + NL+VE YS+ Sbjct: 119 ALELCAQRGRVEWVEVDADKKSGVFKNVPARSD---LSADINENLIVELYSK 167 >gi|118626033|emb|CAL41743.1| small ribosomal protein 4 [Barbilophozia attenuata] Length = 191 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ FLE RLD ++R PTI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + V + L ++ +P +++ + + + + + Sbjct: 117 SYNCEPGDIITIRSKQKSQSIVTKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 174 VNLKINELLVVXYYSR 189 >gi|302550146|ref|ZP_07302488.1| ribosomal protein S4 [Streptomyces viridochromogenes DSM 40736] gi|302467764|gb|EFL30857.1| ribosomal protein S4 [Streptomyces viridochromogenes DSM 40736] Length = 204 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A + +G T LI LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-VSERQLVRAYERASKVQGKTGEALIIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG+ V+ S+R + DV++V+ +SK+ A + + + P Y+ VN + Sbjct: 119 IAVNGKKVDKPSFRVRPDDVVQVRDRSKEKTLFTIAREGGFAPDGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204 >gi|37992721|gb|AAR06539.1| small ribosomal protein 4 [Weymouthia cochlearifolia] Length = 195 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---IXQSPSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|18920749|gb|AAL82419.1| ribosomal protein system 4 [Isopterygium albescens] Length = 196 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I +K + K + + + +R +P +++ + +I Sbjct: 117 IVDISSYRCKPQDLITIKNQQKSETIINKNIEFYQRSKIPNHLTYSSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|59803307|gb|AAX07762.1| Rps4 [Noteroclada confluens] Length = 192 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + Y ++ K S + ++L KQK++ +YG ++E++ Sbjct: 3 IRRLGVLPGLTSKIVESKSGY---INQPTSSKKVSQYRIRLEEKQKLRFHYG-LTERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 59 KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHILINDNMVDIP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY C+ GDVI VK + + + + + + +P ++++N + ++ + Sbjct: 119 SYNCEPGDVITVKNRRESQSIIAKNMEFQRPKIPNHLTLNSIQFQGSVNQVINR---ECI 175 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 DLKINELLVVEYYSR 190 >gi|78369641|gb|ABB43050.1| ribosomal protein 4 [Calymperes erosum] Length = 198 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 LTERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D I +K + K +++ + + +P +++ N +I Sbjct: 117 NRIVNIPSYQCKPQDFITLKDQQKYQTMIVKNINVYPKYKIPSHLTFNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|63101073|gb|AAY33161.1| small ribosomal protein 4 [Phyllodon truncatulus] Length = 198 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ N A I Sbjct: 117 DCIVDIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKSKIPNHLTYNFLEKKALVNEI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|41323083|gb|AAR99771.1| small ribosomal protein 4 [Herbertus subdentatus] Length = 188 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIPSYN 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 C+ GD+I +K K K + + + L ++ +P +++ + + + + + + Sbjct: 117 CEPGDIITIKNKQKSQSIITKNISLFQKFKIPSHLTFDSTKLHGSINQTINR---EWINL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|18920793|gb|AAL82441.1| ribosomal protein system 4 [Taxiphyllum deplanatum] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ ++P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSEIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|121761837|gb|ABM65004.1| ribosomal protein S4 [Plagiomnium confertidens] Length = 195 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|33413195|emb|CAD86733.1| ribosomal protein small subunit 4 [Dicranum tauricum] Length = 191 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYIRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|12330510|gb|AAG52792.1| ribosomal protein 4 [Ditrichum pallidum] Length = 189 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIIIKNIDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|118577542|gb|ABL07137.1| small ribosomal protein 4 [Peperomia galioides] Length = 186 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K PV+ S L Q R K S + ++L KQK++ +YG + E++ + Sbjct: 1 GALPGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I ++ K V + A R ++P++++++ +I S + Sbjct: 116 KPRDIITMRNAQKSKVLVQNSMDSASREELPKHLTLDSSQYKGIVNQIIDSK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|89147838|gb|ABD62767.1| ribosomal protein 4 [Podomitrium malaccense] Length = 202 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++ + KI RR+G K + SY + K S + ++L KQK++ + Sbjct: 2 ARYRGPRTKIIRRLGALPGLSYKMLGSKSSYT---NRLTTNRKISQYRIRLEEKQKLRFH 58 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A ++G T L+ LE RLD IV+R PTI AARQ VNHRH+ Sbjct: 59 YG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHI 117 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFV 180 +++ +VNI SY CK G+VI +K + + + + + L E+ +P +++ + + Sbjct: 118 VIDENTVNIPSYNCKPGEVITIKNRRESQSIITKNVNLFREQRIPNHLTFDSTRFYGSVN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 +I + + LV E+YS Sbjct: 178 QIIDR---ECISLKINELLVXEYYS 199 >gi|12642236|gb|AAK00200.1| rps4 [Aphanorrhegma serratum] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S Q K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD IV+R PTI ARQ VNH HVLVN Sbjct: 56 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHXHVLVNDCI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SYRCK D I VK + K A + + +++ VP +++ + +I L Sbjct: 116 LDIPSYRCKPEDXITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTXKKGLVNQI---L 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+ SR Sbjct: 173 HRESIGLKINELLVVEYNSR 192 >gi|16565395|gb|AAL26212.1|AF313612_1 small ribosomal protein 4 [Pinus thunbergii] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K P N + + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R PTI ARQ VNH H+ VN Sbjct: 56 RQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGHIRVNDHM 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK DVI ++ + + A + + L +RD +P +++ + +I S Sbjct: 116 VDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFINQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WINLKINELLVVEYYSR 192 >gi|63100993|gb|AAY33121.1| small ribosomal protein 4 [Spiridentopsis longissima] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035720|gb|AAY62791.1| small ribosomal protein subunit 4 [Syrrhopodon texanus] Length = 194 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG ++E+ Sbjct: 1 VKIIRRLGTLXGLTNKIPQLKSSS---INQSTSNKKTSQYRIRLEEKQKLRFHYG-LTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SY+CK D I +K + K +++ + + +P +++ N +I L Sbjct: 117 NIPSYQCKPQDFITLKDQQKYQTMIIKNVNFSPKYKIPSHLTFNSVEKKGLVTQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKVNELLVVEYYSR 192 >gi|42794732|gb|AAS45761.1| Rps4 [Vaccinium poasanum] Length = 211 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K S + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTRNSRRTQSRXVKKK--KSQYHIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ V HRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLXIKELLVVEYYSR 207 >gi|328541174|gb|AEB21811.1| ribosomal protein S4 [Telaranea pulcherrima var. mooreana] Length = 196 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K+ SY K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVXRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D + R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRPDNTILRLGMASTIPGARQLVNHRHISINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSIDQTINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIDLKINELLVVEYYSR 193 >gi|49182776|gb|AAT57850.1| small ribosomal protein [Petalophyllum ralfsii] Length = 195 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G + SY ++ K S + ++L KQK++ +YG ++E Sbjct: 1 RAKVIRRLGALPGLTDGILASKFSY---INRSASSKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++G T L+ LE RLD I++R PTI ARQ VNH H+ ++G + Sbjct: 57 RQLLRYVRIAREAKGSTGRVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIAIDGNT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY K GDVI +K + + + + +++ +P +++++ + ++ Sbjct: 117 VDIPSYNRKPGDVITIKNRRESQSIITRNMSSSQKPKIPNHLTLDSAQFRGSVDQVIDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---WMNLKINELLVVEYYSR 193 >gi|37992479|gb|AAR06418.1| small ribosomal protein 4 [Cyathophorella tonkinensis] Length = 194 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|21914172|gb|AAM81308.1| ribosomal protein subunit 4 [Bryum pseudotriquetrum] Length = 196 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 ++ +I RR+G K+P + ++ K S + ++L KQK++ +YG I+ Sbjct: 1 ARVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K A + + L ++ P +++ N +I Sbjct: 117 IVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESIGLKINELLVVEYYSR 194 >gi|121761875|gb|ABM65023.1| ribosomal protein S4 [Plagiomnium maximoviczii] Length = 195 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|121761820|gb|ABM64996.1| ribosomal protein S4 [Plagiomnium maximoviczii] Length = 195 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SINLKINELLVVEYYSR 193 >gi|111115445|ref|YP_710063.1| 30S ribosomal protein S4 [Borrelia afzelii PKo] gi|122956337|sp|Q0SMP1|RS4_BORAP RecName: Full=30S ribosomal protein S4 gi|110890719|gb|ABH01887.1| ribosomal protein S4 [Borrelia afzelii PKo] Length = 208 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 119/210 (56%), Gaps = 8/210 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++++ +K K+ RR G N++ +PK + + + PG+HG+ RK+K + +G QL KQK+ Sbjct: 1 MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG +SE++ + FKEA + G T +NL+S LE+ +D IVYRA F + AR V+H Sbjct: 61 KFTYG-VSERQLPNTFKEAKKHHGVTGYNLLSILETIIDNIVYRAGFAFSRAHARLIVSH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176 V++NGR V I S + D I +++ + + A+R++P I +N D + Sbjct: 120 GIVILNGRRVTIPSIILRANDQILIQEIDSLKKLIGSNIEQTSAQRNLPTGIELNADYLN 179 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206 >gi|67036104|gb|AAY62978.1| small ribosomal protein subunit 4 [Hylocomiopsis cylindracarpa] Length = 194 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITTKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|147669123|ref|YP_001213941.1| 30S ribosomal protein S4 [Dehalococcoides sp. BAV1] gi|146270071|gb|ABQ17063.1| SSU ribosomal protein S4P [Dehalococcoides sp. BAV1] Length = 197 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 13/202 (6%) Query: 12 DRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 RR G+ L+ + K R PG G+ R+ S G QLR KQ ++ YG + Sbjct: 2 CRRSGDKLFLKGDKCVTKCVFEKRPKPPGPQLGRPRR--LSDRGQQLRQKQSIRWSYG-M 58 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++FR F A+ G T N++ LE RLD +++R F + ARQ V H H+LVNG Sbjct: 59 TERQFRRFFGLANAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQIVMHGHILVNG 118 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPS 184 + +I SY KEG I V++ SK A ++ E + +P ++S++ + + +P+ Sbjct: 119 QKTDIPSYLIKEGQEITVRETSKATAYFKTLAENIEAKAIPGWLSLDRKTLSGKVISLPN 178 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + VVE+YSR Sbjct: 179 AGD---IDARFDAQTVVEYYSR 197 >gi|22854687|gb|AAN09763.1| small ribosomal protein 4 [Chorisodontium mittenii] Length = 190 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ +++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|42794648|gb|AAS45721.1| Rps4 [Disterigma alaternoides] Length = 211 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRNRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|7576769|gb|AAF63981.1| small ribosomal protein 4 [Pogonatum contortum] Length = 191 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---INQTISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + + +++ +P +++ N +I Sbjct: 117 SYRCKPQDFITIKNRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLVNQILDRD---S 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|227345131|gb|ACP28118.1| small ribosomal protein 4 [Chiloscyphus sp. XHN-2009] Length = 191 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDLIKLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|63191877|gb|AAY34898.1| small ribosomal protein subunit 4 [Eucladium verticillatum] Length = 194 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLSNKTPHLKFSST---NQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 SIPSYRCKPQDFIXIKDRQKSXIMITKNVDFSQKSKIPNHLTFNSIEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|116008993|gb|ABJ52165.1| ribosomal protein S4 [Phyllostachys edulis] Length = 198 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 9/202 (4%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + K RR+G K+P G L + K + ++L+ KQK++ +Y Sbjct: 1 RYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRFHY 56 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ A +++ T L+ LE RLD I++R TI ARQ VNHRH+L Sbjct: 57 G-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRHIL 115 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVR 181 VN R V+I S+RCK D+I K + V + ++ +P++++++ + Sbjct: 116 VNRRIVDIPSFRCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLVKK 175 Query: 182 IPSSLKDVPYPVIMQPNLVVEF 203 I + + LVVE+ Sbjct: 176 ILDRK---WVGLKINELLVVEY 194 >gi|37960581|gb|AAP70660.1| small ribosomal protein 4 [Flatbergium sericeum] Length = 195 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRILRRLGVLPGLTNKTPQSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V Sbjct: 58 QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + + ++ P +++++ +I Sbjct: 118 NIPSYRCKPRDFITIKDRQKSRSIITRSLDYSQSYKTPNHLTLDSLQKKGLVNQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|7576765|gb|AAF63979.1| small ribosomal protein 4 [Meiotrichum lyallii] Length = 191 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|49182698|gb|AAT57811.1| small ribosomal protein [Dendrohypopterygium arbuscula] Length = 195 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYV 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67036102|gb|AAY62977.1| small ribosomal protein subunit 4 [Thuidiopsis furfurosa] Length = 194 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTTKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|210611153|ref|ZP_03288767.1| hypothetical protein CLONEX_00957 [Clostridium nexile DSM 1787] gi|210152140|gb|EEA83147.1| hypothetical protein CLONEX_00957 [Clostridium nexile DSM 1787] Length = 197 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + ++ +S R+ S+ +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPIYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ F +A + G T NL+ LESRLD +V+R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYFAKASKMNGMTGENLMILLESRLDNVVFRMGFARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+K+K K + + R VPE++ VN + + T Sbjct: 114 VLVNGKQVNIPSYLVKAGDVIEIKEKHKGSQRYKDILEVTGGRLVPEWLDVNAEGLQGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPTR---EVIDVPVDEMLIVELYSK 197 >gi|154483162|ref|ZP_02025610.1| hypothetical protein EUBVEN_00863 [Eubacterium ventriosum ATCC 27560] gi|149735970|gb|EDM51856.1| hypothetical protein EUBVEN_00863 [Eubacterium ventriosum ATCC 27560] Length = 197 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R+ R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGLDPIYLGIDKKSNRNL------NRSSRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +++A + G T NL+ LE+RLD +++R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYQKAQKKPGMTGENLMIILETRLDNVIFRMGFARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+K+K K + + R VP ++ V+ +N+ Sbjct: 114 VLVNGKQVNIPSYLIKVGDVIEIKEKCKGSQRYKDIIEVTGGRTVPAWVEVDQENLKGEI 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + V + L+VE YS+ Sbjct: 174 KELPKRDE---IDVPVDEMLIVELYSK 197 >gi|42556398|gb|AAS19794.1| small ribosomal protein 4 [Blasia pusilla] Length = 191 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + Y L+ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNINVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK D+I +K + K + + + ++ +P +++ + +I Sbjct: 117 SYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQIIDR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|29027168|gb|AAN47146.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027170|gb|AAN47147.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027172|gb|AAN47148.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027176|gb|AAN47150.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027178|gb|AAN47151.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027180|gb|AAN47152.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027182|gb|AAN47153.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027184|gb|AAN47154.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027186|gb|AAN47155.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027188|gb|AAN47156.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027196|gb|AAN47160.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027198|gb|AAN47161.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027200|gb|AAN47162.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027202|gb|AAN47163.1| small ribosomal protein 4 [Hymenodontopsis mnioides] Length = 194 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIGKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|300088170|ref|YP_003758692.1| 30S ribosomal protein S4 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527903|gb|ADJ26371.1| ribosomal protein S4 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 207 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54 M++ + + RR GE L + K + R PG G+ R+ S G QLR Sbjct: 1 MARYYLAVCRQCRRSGEKLMLKGNKCLSKCTFDKRPKPPGPQLGRPRR--LSDRGTQLRE 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++ YG + E++FR +F +A+R G T N I LE RLD +VYR + ARQ Sbjct: 59 KQKIRYTYGVL-ERQFRRVFADAERLAGVTGDNFIVLLERRLDNVVYRLGLADSRAQARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 V H H+ VNGR ++I SY KE D I +++S++ ++ E + VP+++SV+ Sbjct: 118 LVRHGHITVNGRKLDIPSYLVKESDEITFREQSRKTGYYKRVVEVIETKVVPDWLSVDRK 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +V +P+ + VE+YSR Sbjct: 178 TLVCKVSSLPTPGD---LEQKLDAQAAVEYYSR 207 >gi|225574732|ref|ZP_03783342.1| hypothetical protein RUMHYD_02809 [Blautia hydrogenotrophica DSM 10507] gi|225038061|gb|EEG48307.1| hypothetical protein RUMHYD_02809 [Blautia hydrogenotrophica DSM 10507] Length = 197 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R + + +TR +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLDLDPIYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +K+AD+ +G T NL+ LESRLD IV+R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYKKADKMQGQTGENLMVMLESRLDNIVFRMGFARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 + VNG+ VNI SY K GDVIE+K+K K + R VPE++ V+ + + T Sbjct: 114 ITVNGKVVNIPSYLVKAGDVIEIKEKCKGSERYKGILEVTGGRLVPEWLDVDQEALRGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPTRDI---IDVPVNEMLIVELYSK 197 >gi|121761839|gb|ABM65005.1| ribosomal protein S4 [Plagiomnium vesicatum] Length = 195 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMASTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|157689418|gb|ABV65265.1| ribosomal protein S4 [Batis maritima] Length = 193 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 9/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RTVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSLTIPQARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I VK + K A V A ++P+++++ +I Sbjct: 116 DIPSYRCKPRDIITVKDEQKSRALVHTFLDSSAHEELPKHLTLQTFQYEGFVNQIIDRK- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --SVSLKINELLVVEYYSR 191 >gi|32401802|gb|AAP80889.1| small ribosomal protein 4 [Nandina domestica] Length = 191 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P + G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 6 GALPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 60 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 61 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 120 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I + + K A + + ++P++++++ +I S + Sbjct: 121 KPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGLVNQIIDSK---WVGLK 177 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 178 INELLVVEYYSR 189 >gi|63101043|gb|AAY33146.1| small ribosomal protein 4 [Sphaerotheciella sphaerocarpa] Length = 194 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|28194747|gb|AAO33635.1|AF480990_1 ribosomal protein S4 [Tortula atrovirens] gi|28194777|gb|AAO33650.1|AF481005_1 ribosomal protein S4 [Crossidium davidai] Length = 196 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLNINELLVVEYYSR 194 >gi|28194727|gb|AAO33625.1|AF480980_1 ribosomal protein S4 [Tetrapterum tetragonum] gi|157887722|emb|CAM33383.1| ribosomal protein s4 [Tetrapterum tetragonum] Length = 196 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SY CK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYCCKPQDFITINDRKKSQVIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQDSIGLKINELLVVEYYSR 194 >gi|6002041|emb|CAA58929.1| ribosomal protein S4 [Cyperus vegetus] Length = 199 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 6/204 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+ + + P + K + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLRALPGLVQRKKYRKLKFRPVDAKIPFRKKKKPYRIRLEEKQKIRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A +S+G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 61 HYG-LTERQLVRYIHIAGKSKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179 +LVNG V+I SYRCK D+I +K + V ++ A+ +P+++++ N Sbjct: 120 ILVNGHIVDIPSYRCKPRDIITIKDNERSFDLVKKSIASSAQNKLPKHLTI-SKNYTGRV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203 +I + + + LVVE+ Sbjct: 179 KKIIDRPE---VGLQIDELLVVEY 199 >gi|28194745|gb|AAO33634.1|AF480989_1 ribosomal protein S4 [Tortula bolanderi] gi|28194773|gb|AAO33648.1|AF481003_1 ribosomal protein S4 [Tortula bolanderi] gi|85001763|gb|ABC68419.1| small ribosomal protein 4 [Tortula bolanderi] Length = 196 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKTPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + ++ K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|170516219|gb|ACB15111.1| small ribosomal protein 4 [Lepidozamia peroffskyana] Length = 194 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K P +R+ RR S + ++L KQK++ +YG ++E Sbjct: 1 RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRR---ISQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R Sbjct: 56 RQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRV 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK DVI V+ + K A + + L+++D +P +++++ +I S Sbjct: 116 VDIPSYRCKPRDVITVRDQQKLRAMIEKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WIGLKINELLVVEYYSR 192 >gi|157689498|gb|ABV65305.1| ribosomal protein S4 [Hypseocharis bilobata] Length = 197 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 11/204 (5%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVN-TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K R+G KSP + ++ P R K S + ++L KQK++ +YG Sbjct: 1 RGPRFKKICRLGALPGLTSKSPRDVSKKKTP-----SRARKKSQYRIRLEEKQKLRFHYG 55 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+LV Sbjct: 56 -LTERQLLKYVRIARKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPRARQLVNHRHILV 114 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D+I ++K K A + + + + +P ++++N +I Sbjct: 115 NDHIVDIPSYRCKPRDIITAREKPKSRALIQNSLDSSPPKKLPNHLTLNPLQYKGLVNKI 174 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 S + + ++ LVVE+YSR Sbjct: 175 IDSKR---AGLKIKELLVVEYYSR 195 >gi|20531081|gb|AAM27362.1| ribosomal protein 4 [Diphyscium fulvifolium] Length = 192 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K +++ +++ P ++ ++ +I Sbjct: 117 PSYRCKPQDFITIKDRQKSQNIIVKNMDFSQKYKTPNHLXLDSLXKKGLVNQILDRG--- 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|153854997|ref|ZP_01996210.1| hypothetical protein DORLON_02216 [Dorea longicatena DSM 13814] gi|149752494|gb|EDM62425.1| hypothetical protein DORLON_02216 [Dorea longicatena DSM 13814] Length = 197 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + ++ +S R+ S+ +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPVYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK F + FK+A + G T NL+ LESRLD +V+R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFLNYFKKASKMNGMTGENLMVLLESRLDNVVFRLGLARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ +NI SY K GDV+E+K+ K E + R VPE++ + +N+ T Sbjct: 114 VLVNGKQINIPSYLVKAGDVVEIKEAKKSSPRYKEIVEVTGGRLVPEWLEADLENLKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P V + L+VE YS+ Sbjct: 174 KELPKR---EAIDVPVDEMLIVELYSK 197 >gi|67036070|gb|AAY62961.1| small ribosomal protein subunit 4 [Leskeella nervosa] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|63191869|gb|AAY34894.1| small ribosomal protein subunit 4 [Ephemerum serratum] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKTPHVKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDCITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|49182791|gb|AAT57857.1| small ribosomal protein [Riccardia sp. Davis 151] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G + P + SY + K S + L+L KQK++ ++G ++E Sbjct: 1 RTKIIRRLGALPGLTSRIPKSRSSY---IDRSASSKKISQYRLRLEEKQKLRFHHG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD ++R VPTI AARQ VNHRH+L+N Sbjct: 57 RQLLKYVCIAKKAKGSTGQFLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHILINASM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I +K + + S+L A+ ++ +P +++ + + + R Sbjct: 117 VDIPSYNCKIGDIITIKNRGRNQLSLLTATSSTQKPGIPNHLTFDSVDFRGSVNRTIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EGIDLKINELLVVEYYSR 193 >gi|17025860|gb|AAL32095.1| ribosomal protein 4 [Mitthyridium sp. Wall 3830] Length = 199 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + ++ K S + ++L KQK++ +YG ++E Sbjct: 5 RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 60 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 61 RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 120 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 121 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI---L 177 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 DHESIGLKINELLVVEYYSR 197 >gi|170516225|gb|ACB15114.1| small ribosomal protein 4 [Ceratozamia miqueliana] Length = 194 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K P +R+ R+ S + ++L KQK++ +YG ++E Sbjct: 1 RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R Sbjct: 56 RQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRV 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SYRC DVI V+ + + A + + L+++D +P +++++ +I S Sbjct: 116 VDIPSYRCNPRDVITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVHQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WISLKINELLVVEYYSR 192 >gi|293634127|gb|ADE60443.1| ribosomal protein subunit 4 [Polytrichum strictum] Length = 191 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|37548877|gb|AAO32707.1| ribosomal protein 4 [Polytrichastrum formosum] Length = 192 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 58 NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 118 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 174 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 IGLKINELLVVEYYSR 190 >gi|28194683|gb|AAO33603.1|AF480958_1 ribosomal protein S4 [Syntrichia caninervis] Length = 196 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGILPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|67035624|gb|AAY62743.1| small ribosomal protein subunit 4 [Mesotus celatus] Length = 194 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSGS---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ VP +++ + +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|32401804|gb|AAP80890.1| small ribosomal protein 4 [Magnolia stellata] Length = 189 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGALPGLTSKRP----RPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLR 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I S Sbjct: 56 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I + + + A + + ++ ++++ + +I S Sbjct: 116 YRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLVNQIIDSK---WI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|67036008|gb|AAY62930.1| small ribosomal protein subunit 4 [Claopodium whippleanum] Length = 194 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE+RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLETRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63101009|gb|AAY33129.1| small ribosomal protein 4 [Limbella tricostata] Length = 194 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI AARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPAARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|294628350|ref|ZP_06706910.1| 30S ribosomal protein S4 [Streptomyces sp. e14] gi|292831683|gb|EFF90032.1| 30S ribosomal protein S4 [Streptomyces sp. e14] Length = 204 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A + +G T LI LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-VSERQLVRAYERASKVQGKTGEALIVELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG+ V+ S+R + DV++V+ +SK+ A + E + P Y+ VN + Sbjct: 119 IQVNGQKVDKPSFRVRPDDVVQVRDRSKEKTLFTIAREGGFAPEGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204 >gi|92417455|gb|ABE76823.1| ribosomal protein subunit 4 [Fissidens taxifolius] Length = 196 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGILQGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMTPTIPGARQLVNHRHILVNDH 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K +++ +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDQQKYQVMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQIIDQ 176 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---ESIGLKINELLVVEYYSR 194 >gi|293634097|gb|ADE60428.1| ribosomal protein subunit 4 [Polytrichastrum pallidisetum] Length = 191 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T L+ LE RLD I++R TI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|37992641|gb|AAR06499.1| small ribosomal protein 4 [Penzigiella cordata] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQLTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|121761841|gb|ABM65006.1| ribosomal protein S4 [Plagiomnium integrum] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIXLKINELLVVEYYSR 193 >gi|63078605|gb|AAY29389.1| ribosomal protein S4 [Pleurochaete squarrosa] Length = 196 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 2 RVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 58 RQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 118 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 DQESIGLKINELLVVEYYSR 194 >gi|63078591|gb|AAY29382.1| ribosomal protein S4 [Pleurochaete squarrosa] gi|63078601|gb|AAY29387.1| ribosomal protein S4 [Pleurochaete squarrosa] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|42556424|gb|AAS19807.1| small ribosomal protein 4 [Heteroscyphus argutus] Length = 191 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHILINDDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDIIAIKNKQKSQSVITKNLNLFQKLKIPSHLTFDSMKLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|50235354|gb|AAT70710.1| Rps4 [Brachythecium bellicum] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42556426|gb|AAS19808.1| small ribosomal protein 4 [Hygrolembidium acrocladum] Length = 191 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ Y K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKPKSGY---NDRSTPNKKVSQYRVRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RLD + R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYVRIARRAKGSTGQVLLQLLEMRLDNTILRFGMASTIPGARQLVNHRHIPINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K K K + + + L + +P +++ + + + + + Sbjct: 117 SYNCKPGDIITIKNKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNIKINELLVVEYYSR 189 >gi|290961835|ref|YP_003493017.1| 30S ribosomal protein S4 [Streptomyces scabiei 87.22] gi|260651361|emb|CBG74483.1| 30S ribosomal protein S4 [Streptomyces scabiei 87.22] Length = 204 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A + +G T LI LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-VSERQLVRAYERASKVQGKTGEALIIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG V+ S+R K DV+ V+++S+Q A + A+ + P Y+ VN + Sbjct: 119 IEVNGHKVDKPSFRVKPDDVVMVRERSRQKPLFEVAREGGFAADGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---VPVICDEQLVVEYYAR 204 >gi|209969161|emb|CAR92828.1| ribosomal protein S4 [Iris humilis] gi|209969163|emb|CAR92829.1| ribosomal protein S4 [Iris humilis] gi|209969165|emb|CAR92830.1| ribosomal protein S4 [Iris humilis] gi|209969167|emb|CAR92831.1| ribosomal protein S4 [Iris humilis] gi|209969169|emb|CAR92832.1| ribosomal protein S4 [Iris humilis] gi|209969171|emb|CAR92833.1| ribosomal protein S4 [Iris humilis] gi|209969173|emb|CAR92834.1| ribosomal protein S4 [Iris humilis] gi|209969175|emb|CAR92835.1| ribosomal protein S4 [Iris humilis] gi|209969177|emb|CAR92836.1| ribosomal protein S4 [Iris humilis] gi|209969179|emb|CAR92837.1| ribosomal protein S4 [Iris humilis] gi|209969181|emb|CAR92838.1| ribosomal protein S4 [Iris humilis] gi|209969183|emb|CAR92839.1| ribosomal protein S4 [Iris humilis] gi|209969185|emb|CAR92840.1| ribosomal protein S4 [Iris humilis] Length = 187 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I K K + A + ++P +++++ +I S + Sbjct: 116 CKPRDIITTKDKQRSKALIQNFIASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|22854723|gb|AAN09781.1| small ribosomal protein 4 [Leucoloma zeyheri] Length = 191 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIASTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K +++ + +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|28194827|gb|AAO33675.1|AF481030_1 ribosomal protein S4 [Tortula revolvens] Length = 196 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPSHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|121761833|gb|ABM65002.1| ribosomal protein S4 [Plagiomnium cordatum] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 IDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---FIDLKINELLVVEYYSR 193 >gi|121761845|gb|ABM65008.1| ribosomal protein S4 [Plagiomnium vesicatum] Length = 195 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMASTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|33413219|emb|CAD86745.1| ribosomal protein small subunit 4 [Dichodontium pellucidum] Length = 187 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTSKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A +++ +++ VP++++ N +I L + Sbjct: 117 KPQDFITIKNQQKSQAMIMKNLDFSQKYKVPDHLTFNSLEKKGLVNQI---LDQESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|42794699|gb|AAS45745.1| Rps4 [Sphyrospermum buxifolium] Length = 211 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|67035734|gb|AAY62798.1| small ribosomal protein subunit 4 [Bryobartramia novae-valesiae] Length = 188 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +V+R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ VP ++S + +I L + Sbjct: 117 CKPQDFISIKNRQKSQAIIIKNIDFSQKYKVPNHLSFDSLQKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|169142796|ref|YP_001687221.1| ribosomal protein S4 [Aneura mirabilis] gi|187608859|sp|A2T833|RR4_ANEMR RecName: Full=Plastid 30S ribosomal protein S4 gi|153973822|gb|ABS54482.1| ribosomal protein S4 [Aneura mirabilis] Length = 202 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR G K+P K S + ++L KQK++ Sbjct: 1 MSRYRGPRMKMIRRPGTLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRL 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ A ++G T L+ LE RLD ++R VPTI AARQ VNHRH Sbjct: 58 HYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 V +N ++I SY CK GDVI + + K ++ ++P +++ + + + Sbjct: 117 VSINEHIIDIPSYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 177 QQIIDRD---WIDLKINELLVVEYYSR 200 >gi|42794654|gb|AAS45724.1| Rps4 [Disterigma rimbachii] Length = 211 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQXKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAERD-----VPEYISVN 171 RHVLVNG ++I SYRCK D+I ++KS+ L S L R VP ++++N Sbjct: 116 RHVLVNGHIIDIPSYRCKPRDIITAREKSRALIHNSFQNLFDLPSRKQKRKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|302388060|ref|YP_003823882.1| ribosomal protein S4 [Clostridium saccharolyticum WM1] gi|302198688|gb|ADL06259.1| ribosomal protein S4 [Clostridium saccharolyticum WM1] Length = 197 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 106/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R +R K S +G+QLR KQK K Sbjct: 1 MAVDRVPVLKRCRSLGLDPIYLGIDKKSNREL------KRANRKMSEYGIQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A R G NL+ LE RLD +V+R F T RQ V+H+ Sbjct: 55 IYGVL-EKPFRNYYAKASRMNGLVGENLMILLERRLDNVVFRMGFGRTRRETRQMVDHKS 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI SY K GDVIEVK+KSK A + A R VP ++ V+H+N+ T Sbjct: 114 ILVNGKCVNIPSYLIKAGDVIEVKEKSKANARFKSVQEATAGRMVPAWLDVDHENLRGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ + V + L+VE YS+ Sbjct: 174 KEFPTRDE---IDVPVNEMLIVELYSK 197 >gi|121761879|gb|ABM65025.1| ribosomal protein S4 [Plagiomnium vesicatum] Length = 195 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE+R D I++R PTI AARQ VNHRH+LVN R Sbjct: 57 RQLLNYIRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPAARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNFLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|67036064|gb|AAY62958.1| small ribosomal protein subunit 4 [Isopterygiopsis muelleriana] Length = 195 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T + E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVSLQSPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|284049231|ref|YP_003399570.1| ribosomal protein S4 [Acidaminococcus fermentans DSM 20731] gi|283953452|gb|ADB48255.1| ribosomal protein S4 [Acidaminococcus fermentans DSM 20731] Length = 197 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ ++ K R +G + + R +R+ K S +G+QL KQK K Sbjct: 1 MAIDKTPVLKRCRSLGMSPAFVGVMKESNRQP------KRQFKKKSEYGMQLAEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +++A + G NL+ LE RLD +VYR T ARQ V H H Sbjct: 55 IYGVL-EKQFRGYYEKAKKMEGIAGANLLILLERRLDNVVYRMGLAHTRRQARQLVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 + VNG+ ++I S K GDV+ V + S+ A ++ L + VP +ISV+ N+ Sbjct: 114 IAVNGKRLDIPSALVKAGDVVSVMENSRSSAYFKGMAEVLGKTSVPAWISVDAQNLCGKV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P +D+ PV + ++VE YS+ Sbjct: 174 DRLPVR-EDIDVPV--EEQMIVELYSK 197 >gi|209969129|emb|CAR92812.1| ribosomal protein S4 [Iris mandshurica] gi|209969131|emb|CAR92813.1| ribosomal protein S4 [Iris mandshurica] gi|209969133|emb|CAR92814.1| ribosomal protein S4 [Iris mandshurica] gi|209969135|emb|CAR92815.1| ribosomal protein S4 [Iris mandshurica] gi|209969137|emb|CAR92816.1| ribosomal protein S4 [Iris mandshurica] gi|209969139|emb|CAR92817.1| ribosomal protein S4 [Iris mandshurica] gi|209969141|emb|CAR92818.1| ribosomal protein S4 [Iris mandshurica] gi|209969143|emb|CAR92819.1| ribosomal protein S4 [Iris mandshurica] gi|209969145|emb|CAR92820.1| ribosomal protein S4 [Iris mandshurica] gi|209969147|emb|CAR92821.1| ribosomal protein S4 [Iris mandshurica] gi|209969149|emb|CAR92822.1| ribosomal protein S4 [Iris mandshurica] gi|209969151|emb|CAR92823.1| ribosomal protein S4 [Iris mandshurica] gi|209969153|emb|CAR92824.1| ribosomal protein S4 [Iris mandshurica] gi|209969155|emb|CAR92825.1| ribosomal protein S4 [Iris mandshurica] gi|209969157|emb|CAR92826.1| ribosomal protein S4 [Iris mandshurica] gi|209969159|emb|CAR92827.1| ribosomal protein S4 [Iris mandshurica] Length = 187 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRP----RSGSDLENQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I K K + A + ++P +++++ +I S + Sbjct: 116 CKPRDIITTKDKQRSKALIQNFIASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|209969113|emb|CAR92804.1| ribosomal protein S4 [Iris vorobievii] Length = 187 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKGP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I K K + A + ++P +++++ +I S + Sbjct: 116 CKPRDIITTKDKQRSKALIQNFMASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|163816004|ref|ZP_02207374.1| hypothetical protein COPEUT_02184 [Coprococcus eutactus ATCC 27759] gi|158448814|gb|EDP25809.1| hypothetical protein COPEUT_02184 [Coprococcus eutactus ATCC 27759] Length = 214 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 112/208 (53%), Gaps = 13/208 (6%) Query: 1 MSKRESSKHKIDRRIG-ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M+ + K R +G E ++ N + R K S +GLQLR KQK K Sbjct: 18 MAVDRTPVLKRCRSLGMEPMYLGIDKKSNRKP-------NRSNRKQSEYGLQLREKQKAK 70 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK FR+++ +A++ +G T NL++ LE RLD I++R F T ARQ V+H+ Sbjct: 71 FIYGVL-EKPFRNLYAKAEQQKGLTGPNLMTLLELRLDNIIFRLGFARTRREARQIVDHK 129 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVAT 178 HVLVNG+ VNI SY K GD IE+++KSK L + E VP +++ + DN+ Sbjct: 130 HVLVNGKCVNIPSYSVKPGDKIEIREKSKSLQRYKDIMAATEGVLVPGWLTADRDNLTGE 189 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V PS + V + L+VE YS+ Sbjct: 190 VVEKPSREQ---IDVPVNETLIVELYSK 214 >gi|42794630|gb|AAS45714.1| Rps4 [Cavendishia bracteata] Length = 211 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ L L + + + VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKKVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|209969095|emb|CAR92795.1| ribosomal protein S4 [Iris vorobievii] gi|209969097|emb|CAR92796.1| ribosomal protein S4 [Iris vorobievii] gi|209969099|emb|CAR92797.1| ribosomal protein S4 [Iris vorobievii] gi|209969101|emb|CAR92798.1| ribosomal protein S4 [Iris vorobievii] gi|209969103|emb|CAR92799.1| ribosomal protein S4 [Iris vorobievii] gi|209969105|emb|CAR92800.1| ribosomal protein S4 [Iris vorobievii] gi|209969107|emb|CAR92801.1| ribosomal protein S4 [Iris vorobievii] gi|209969109|emb|CAR92802.1| ribosomal protein S4 [Iris vorobievii] gi|209969111|emb|CAR92803.1| ribosomal protein S4 [Iris vorobievii] gi|209969117|emb|CAR92806.1| ribosomal protein S4 [Iris vorobievii] gi|209969119|emb|CAR92807.1| ribosomal protein S4 [Iris vorobievii] gi|209969121|emb|CAR92808.1| ribosomal protein S4 [Iris vorobievii] gi|209969123|emb|CAR92809.1| ribosomal protein S4 [Iris vorobievii] gi|209969125|emb|CAR92810.1| ribosomal protein S4 [Iris vorobievii] gi|209969127|emb|CAR92811.1| ribosomal protein S4 [Iris vorobievii] Length = 187 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I K K + A + ++P +++++ +I S + Sbjct: 116 CKPRDIITTKDKQRSKALIQNFMASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|78102665|gb|ABB21546.1| small ribosomal protein 4 [Plagiochila gigantea] Length = 189 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|28194841|gb|AAO33682.1|AF481037_1 ribosomal protein S4 [Syntrichia rigescens] Length = 196 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGILPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|67036000|gb|AAY62926.1| small ribosomal protein subunit 4 [Trachypus bicolor] Length = 195 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLK---PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYGSLEKKGLVTQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESVGLKINELLVVEYYSR 193 >gi|67036076|gb|AAY62964.1| small ribosomal protein subunit 4 [Bestia vancouveriensis] Length = 194 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|78369621|gb|ABB43040.1| ribosomal protein 4 [Calymperes tenerum] Length = 198 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S+ ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALSGLTNKIPQLKSSF---VNQSISSKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D I +K + K +++ + + + +P ++ N +I Sbjct: 117 KRIVNIPSYQCKLQDAITIKDQQKYHTMIVKNTNFSPKYKIPSHLMFNSVEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|67035859|gb|AAY62856.1| small ribosomal protein subunit 4 [Warburgiella leucocytus] Length = 194 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + +++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFSQKSKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|24473842|gb|AAL82765.1| small ribosomal subunit protein 4 [Plagiobryum demissum] Length = 195 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A + + L E P +++ N +I L Sbjct: 117 VNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQEYKTPNHLTYNFLKKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|20531124|gb|AAM27382.1| ribosomal protein 4 [Hedwigia ciliata] Length = 194 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 3 IIRRLGTLPGLTNKTPQLKSSS---INQSTPNKKISQYRIRLEEKQKLRFHYG-ITERQL 58 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I Sbjct: 59 LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNDRIVDI 118 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 119 PSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLQKKGLVNQI---LDRE 175 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LIGLKINELLVVEYYSR 192 >gi|63191755|gb|AAY34837.1| small ribosomal protein subunit 4 [Macrocoma tenuis] Length = 196 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNQR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + ++ +P ++ N +I Sbjct: 117 IVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLVYNSLEKKGLVNQIVDR 176 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---ELIGLKINELLVVEYYSR 194 >gi|63101007|gb|AAY33128.1| small ribosomal protein 4 [Pleuroziopsis ruthenica] Length = 194 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|293634045|gb|ADE60402.1| ribosomal protein subunit 4 [Pogonatum neesii] Length = 191 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPHLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQESQAIITKNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|78102693|gb|ABB21560.1| small ribosomal protein 4 [Plagiochila minutula] Length = 189 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ FLE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|28194703|gb|AAO33613.1|AF480968_1 ribosomal protein S4 [Gymnostomum viridulum] Length = 196 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGNLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSEIMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|328488190|gb|AEB19908.1| small ribosomal protein 4 [Schistochila glaucescens] Length = 191 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD V+R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTVFRMGIATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K + K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNEQKSQSIITRNLNLLQKVKIPNHLTFDPTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|153812444|ref|ZP_01965112.1| hypothetical protein RUMOBE_02843 [Ruminococcus obeum ATCC 29174] gi|149831369|gb|EDM86457.1| hypothetical protein RUMOBE_02843 [Ruminococcus obeum ATCC 29174] Length = 197 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 104/207 (50%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + +TR +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKVSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK F + + +ADR G T NL+ LESRLD +V+R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFHNYYNKADRMPGQTGENLMVLLESRLDNVVFRMGLARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GD IE+K+K K + R VPE++ VN + + T Sbjct: 114 VLVNGKCVNIPSYLVKAGDTIEIKEKCKGSERYKGILEVTGGRLVPEWLDVNQEALSGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P V + L+VE YS+ Sbjct: 174 KELPRR---EAIDVPVNEMLIVELYSK 197 >gi|28194739|gb|AAO33631.1|AF480986_1 ribosomal protein S4 [Pottia bryoides] Length = 196 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + ++ K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFCQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|78102681|gb|ABB21554.1| small ribosomal protein 4 [Plagiochilion oppositum] Length = 189 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + +++ ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIIIKNINSFQKLKIPSHLTFDPTQLQGSVNQVINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|42556480|gb|AAS19835.1| small ribosomal protein 4 [Pellia sp. Koponen et al. 47823] gi|311223012|gb|ADP76588.1| small ribosomal protein 4 [Pellia endiviifolia] Length = 191 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKLESSY---INQSTPNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNH H+++N +V+I Sbjct: 57 KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHGHIVINDYTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ DVI +K ++K + + + + +P +++ + + + Sbjct: 117 SYNCEPRDVITIKNRNKSQSLITKNIDSFRKPKIPNHLTFDFTKFRGSVNQTIDR---EC 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|118577589|gb|ABL07160.1| small ribosomal protein 4 [Piper khasianum] Length = 187 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P + S L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYR Sbjct: 56 RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I + + + V + A R ++P++++++ +I S + Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|303233180|ref|ZP_07319853.1| ribosomal protein S4 [Atopobium vaginae PB189-T1-4] gi|302480765|gb|EFL43852.1| ribosomal protein S4 [Atopobium vaginae PB189-T1-4] Length = 176 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 66/162 (40%), Positives = 97/162 (59%), Gaps = 5/162 (3%) Query: 46 SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105 S +G QLR KQK K YG I EK+FR + +A ++ G T NL+S LE+RLD +V+R F Sbjct: 19 SEYGTQLREKQKAKFIYG-ILEKQFRGYYNKALKNEGITGDNLMSLLETRLDNVVFRLGF 77 Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164 T ARQ V H H+ VNG+ V+I SY+ K DVI V K+K L + E+ ++ER V Sbjct: 78 ARTRKEARQTVRHGHITVNGKRVDIPSYQVKAQDVIAVNPKAKDLLPIKESLIVSERMAV 137 Query: 165 PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P ++ V+ + + T ++IP + + + L+VE YS+ Sbjct: 138 PAWLEVDIEKLQGTVLQIPVRDQ---IDLDIDAQLIVELYSK 176 >gi|157785997|gb|ABV74171.1| small ribosomal protein 4 [Lopidium concinnum] gi|157786000|gb|ABV74172.1| small ribosomal protein 4 [Lopidium concinnum] Length = 198 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 7/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G KS + ++ K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 58 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG Sbjct: 59 ERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGY 118 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K K K + + + + ++ + +++ + +I Sbjct: 119 IVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI--- 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 LDRESIGLKINELLVVEYYSR 196 >gi|66866239|gb|AAY57788.1| small ribosomal protein 4 [Leucolepis acanthoneura] Length = 204 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 13/206 (6%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 4 PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 59 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 60 ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 119 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFV 180 V+I SYRCK D I +K + K + D +P +++ N N Sbjct: 120 LVDIPSYRCKPQDFITIKDRQKSQTMIXXXXXXKNIDFYQKYKIPNHLTYNSLNKKGLVN 179 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 180 QI---LDRESIDLKINELLVVEYYSR 202 >gi|37992723|gb|AAR06540.1| small ribosomal protein 4 [Weymouthia mollis] Length = 192 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ N + +L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQ---TLDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|21914148|gb|AAM81296.1| ribosomal protein subunit 4 [Brachymenium capitulatum] Length = 195 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 VNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|269101005|ref|YP_003289153.1| 30S ribosomal protein S4 [Ectocarpus siliculosus] gi|266631513|emb|CAV31184.1| Chloroplast 30S ribosomal protein S4 [Ectocarpus siliculosus] gi|270118643|emb|CAT18689.1| Chloroplast 30S ribosomal protein S4 [Ectocarpus siliculosus] Length = 204 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 16/212 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + + KI R+G +L G + V + +++KSK S + ++L KQK++ Sbjct: 1 MVRYRGPRLKIINRLG-DLPGLTRKVVIKQETP-----EQKKSKASPYKIRLNEKQKLRY 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E + KEA R +G T L+ LE RLD I++R PTI AARQFV+H H Sbjct: 55 NYG-ITESQLLRYVKEARRRKGLTGFLLMQLLEMRLDNIIFRLGLAPTIPAARQFVSHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP------EYISVNHDN 174 V++N + VNI S++C+ D+I + K + + E P ++ + Sbjct: 114 VMINKKRVNIPSFQCQPNDIISFSKNPKTVTLIKANLNQKENSNPNDNVSNSHLEFDSQL 173 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + + LV+E+YSR Sbjct: 174 LTGKIVNLIQRKD---LRFKINDMLVIEYYSR 202 >gi|17025866|gb|AAL32098.1| ribosomal protein 4 [Mitthyridium sp. Wall 2546] Length = 200 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + ++ K S + ++L KQK++ +YG ++E Sbjct: 6 RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 61 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 62 RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 121 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 122 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---L 178 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 DQESIGLKINELLVVEYYSR 198 >gi|7576761|gb|AAF63977.1| small ribosomal protein 4 [Itatiella ulei] Length = 193 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+ Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 IIRRLGALPGLTNKTLQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 58 LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 118 PSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 174 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 SIGLKINELLVVEYYSR 191 >gi|42794662|gb|AAS45728.1| Rps4 [Macleania cordifolia] Length = 211 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQXKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|28194775|gb|AAO33649.1|AF481004_1 ribosomal protein S4 [Crossidium squamiferum] Length = 196 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVIITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|28194743|gb|AAO33633.1|AF480988_1 ribosomal protein S4 [Pottia lanceolata] Length = 194 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G + P + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNEIPHLR---PSSXNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G + L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSSGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + ++ K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|46486540|gb|AAS98706.1| ribosomal protein subunit 4 [Hampeella alaris] Length = 198 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I VK + + +++ +P ++ + +I Sbjct: 117 DCIVNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|289599856|gb|ADD12879.1| ribosomal protein S4 [Curatella americana] Length = 189 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I S Sbjct: 56 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I VK + K A + ++P++++++ +I S Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WV 172 Query: 192 PVIMQPNLVVEFYSR 206 V + LVVE+YSR Sbjct: 173 GVKINELLVVEYYSR 187 >gi|11228658|gb|AAG33114.1| small ribosomal protein 4 [Oncophorus wahlenbergii] Length = 191 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKIPNHLTFNSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67036072|gb|AAY62962.1| small ribosomal protein subunit 4 [Lescuraea radicosa] Length = 195 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|260589250|ref|ZP_05855163.1| ribosomal protein S4 [Blautia hansenii DSM 20583] gi|331082658|ref|ZP_08331781.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540331|gb|EEX20900.1| ribosomal protein S4 [Blautia hansenii DSM 20583] gi|330400277|gb|EGG79919.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 6_1_63FAA] Length = 197 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + +TR +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGLDPVYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +K+AD+ G T NL+ LE+RLD +++R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYKKADQKPGQTGENLMIMLETRLDNVIFRMGLARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 V+VNG+ VNI SY K GDVIE+K+K K + + R VP ++ ++ + + Sbjct: 114 VMVNGKQVNIPSYLVKAGDVIEIKEKCKGSQRYKDILEVTGGRLVPAWLDIDQEALKGEV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KALPTREE---IDVPVDEMLIVELYSK 197 >gi|74273099|gb|ABA01249.1| ribosomal protein S4 [Passiflora arborea] Length = 186 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K + K + + L+ ++P +++++ +I S + Sbjct: 116 KPRDIIMTKDEQKSRTLIQNSLDLSPHEELPNHLTLHPFQYKGLVNQIIDSK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|157689458|gb|ABV65285.1| ribosomal protein S4 [Crypteronia paniculata] Length = 191 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G K P G Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KIRRLGALPGLTSKRP----RTGSDFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 56 LKCVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D+I K + K A + A ++ ++++++ +I S Sbjct: 116 PSYRCKPRDIITAKDEQKSRALIQNYLDSSAHEELSKHLTLHPVQYKGLVNQIIDSK--- 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 WVGLKINELLVVEYYSR 189 >gi|28194685|gb|AAO33604.1|AF480959_1 ribosomal protein S4 [Pterygoneurum lamellatum] gi|28194763|gb|AAO33643.1|AF480998_1 ribosomal protein S4 [Tortula subulata var. subinermis] gi|28194779|gb|AAO33651.1|AF481006_1 ribosomal protein S4 [Crossidium aberrans] gi|28194857|gb|AAO33690.1|AF481045_1 ribosomal protein S4 [Bryoerythrophyllum recurvirostrum] gi|28194859|gb|AAO33691.1|AF481046_1 ribosomal protein S4 [Crossidium laevipilum] Length = 196 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|295109501|emb|CBL23454.1| SSU ribosomal protein S4P [Ruminococcus obeum A2-162] Length = 197 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 104/207 (50%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + +TR +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK F + + +ADR G T NL+ LESRLD +V+R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFHNYYNKADRMPGQTGENLMVLLESRLDNVVFRMGLARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GD IE+K+K K + R VPE++ VN + + T Sbjct: 114 VLVNGKCVNIPSYLVKAGDTIEIKEKCKGSERYKGILEVTGGRLVPEWLDVNQEALSGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P V + L+VE YS+ Sbjct: 174 KELPRR---EVIDVPVNEMLIVELYSK 197 >gi|63191761|gb|AAY34840.1| small ribosomal protein subunit 4 [Cyrtopus setosus] Length = 194 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|121761829|gb|ABM65000.1| ribosomal protein S4 [Plagiomnium maximoviczii] Length = 195 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---FIDLKINELLVVEYYSR 193 >gi|42794627|gb|AAS45713.1| Rps4 [Anthopterus revolutus] Length = 211 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S +K ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRXTQSRFVXKKKXXXX--IRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE LD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMGLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKGKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|146261569|gb|ABQ15094.1| ribosomal protein S4 [Itea virginica] Length = 187 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P+ G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRPI----VGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I + + K A + + ++P++++++ +I + + Sbjct: 116 CKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDTK---WVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|20531094|gb|AAM27368.1| ribosomal protein 4 [Barbula convoluta] Length = 193 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 KIIRRLGTLPGLTNKIPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VN Sbjct: 57 LLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNNIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 IPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQ 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|49182682|gb|AAT57803.1| small ribosomal protein [Bryopteris filicina] Length = 192 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTGKISKTK------IDRSVLNKKISQYRIRLEEKQKLRFHYG-LTE 53 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ PTI +ARQ VNHRH+ +N Sbjct: 54 RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINDYI 113 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 +NI SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 LNIPSYNCKPGDIITIKNKEKSQSIISKNINLSQKLQIPNHLTFDSTQLRGLVNQTIRR- 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 --EWIDLKINELLVVEYYSR 190 >gi|85001765|gb|ABC68420.1| small ribosomal protein 4 [Ephemerum sessile] Length = 195 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKTPQVKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|29422397|gb|AAO84594.1| small ribosomal protein 4 [Flowersia sinensis] Length = 198 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKPPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I + + K A + + ++ +P +++ N +I Sbjct: 117 DHIVNIPSYRCKPQDFITIXDRQKSQAIISKNIDXYQKYKIPNHLTYNSLENKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + L VE+YSR Sbjct: 176 --LDRESIGLKINXLLXVEYYSR 196 >gi|18920773|gb|AAL82431.1| ribosomal protein system 4 [Plagiothecium neckeroideum] Length = 196 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 3 CEIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 58 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 59 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 118 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 119 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 RESIGLKINELLVVEYYSR 194 >gi|67035755|gb|AAY62808.1| small ribosomal protein subunit 4 [Muelleriella crassifolia] Length = 194 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H++VN R V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 DIPSYRCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --LIGLKINELLVVEYYSR 192 >gi|17025828|gb|AAL32081.1| ribosomal protein 4 [Syrrhopodon muelleri] Length = 198 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+P S + K S + ++L KQK++ +YG Sbjct: 1 RGPRVKILRRLGTLSGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D I +K + K +++ + + P ++ N +I Sbjct: 117 NRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTSFFPKYKTPNHLIFNSVEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|227345135|gb|ACP28120.1| small ribosomal protein 4 [Clasmatocolea humilis] Length = 191 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 3 RLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY Sbjct: 59 MRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 C+ GD+I ++ K K + + + E +P +++ + + + ++ + Sbjct: 119 NCEPGDIITIRNKQKSQSIITKNINFFQELKIPSHLTFDSIKLRGSVNQMINR---EWVN 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|17025830|gb|AAL32082.1| ribosomal protein 4 [Mitthyridium sp. Wall 1086] Length = 200 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + ++ K S + ++L KQK++ +YG ++E Sbjct: 6 RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 61 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 62 RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 121 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 122 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI---L 178 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 DQESIGLKINELLVVEYYSR 198 >gi|125662690|gb|ABN50295.1| small ribosomal protein 4 [Cathaya argyrophylla] Length = 198 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P + + K S + ++ KQK++ +YG + Sbjct: 1 GPRLKIIRRLKTLPGLTSKRPQKRKDS----MNRSSSRKISQYRIRSEEKQKLRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A R++G T L+ LE RLD I+++ PTI ARQ VNH H+ VN Sbjct: 56 TERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFQLGMAPTIPGARQLVNHGHIQVND 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDNMVATFVRI 182 V+I SY CK DVI ++ + + A + + L +R+ +P +++ + +I Sbjct: 116 HMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRNRDKLPNHLTFHSLQCKGFINQI 175 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 176 IDSK---WISLKINELLVVEYYSR 196 >gi|49182690|gb|AAT57807.1| small ribosomal protein [Ceratolejeunea coarina] Length = 192 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 11/200 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K L K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTE 53 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ TI ARQ VNHRH+ +N Sbjct: 54 RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQIVNHRHIFINDYI 113 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNITLSQKLQIPNHLTFDSTQLRGLINQTIRR- 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 --EWIDLKINELLVVEYYSR 190 >gi|67035947|gb|AAY62900.1| small ribosomal protein subunit 4 [Forsstroemia trichomitria] Length = 198 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G ++ S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGTLPGLTNRTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNH+HVL+N Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHKHVLIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYR K D I +K + K + + +L ++ +P +++ N +I Sbjct: 117 DSMVDIPSYRRKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYNSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|63191781|gb|AAY34850.1| small ribosomal protein subunit 4 [Notoligotrichum australe] Length = 194 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKILQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R V Sbjct: 57 QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|151370784|gb|ABS11010.1| ribosomal protein subunit 4 [Dendro-hypnum milnei] Length = 194 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G L K+ S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 RIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+ Sbjct: 58 LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVD 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 118 IPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI---LDR 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 ESIGLKINELLVVEYYSR 192 >gi|37683554|gb|AAQ98828.1| small ribosomal protein 4 [Pogonatum nudiusculum] Length = 190 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|37039871|gb|AAQ88209.1| small ribosomal protein 4 [Andreaea rothii] Length = 195 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E+ Sbjct: 2 VRIIRRLGALPGLTNKTPQLKSGY---MNPFISNKKMSQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R V Sbjct: 58 QLLKYVRIARRAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + +++ +P ++ N +I Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITKNIDCSQKYKIPNHLIFNSLQKKGLINQIIDR-- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -ESIGLKINELLVVEYYSR 193 >gi|7576763|gb|AAF63978.1| small ribosomal protein 4 [Lyellia aspera] Length = 191 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGYS---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 KYVRIARGAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIAKNIDFSQKYKIPNHLTFNSLETKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67036004|gb|AAY62928.1| small ribosomal protein subunit 4 [Cryptopapillaria penicillata] Length = 194 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035935|gb|AAY62894.1| small ribosomal protein subunit 4 [Pseudoleskea andina] Length = 197 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K P ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVRIIRRLGTLPGLTNKXPQLKSXS---INQXTSNKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A + +G T L+ LE R D ++R TI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKXKGSTGEVLLQLLEMRXDNXIFRLGMAXTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I Sbjct: 117 XIVDIPSYRCKPQDFITIKNQRKSEAIIXKNIEFYQKXKIPNHLTYSSLEKKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|77019193|emb|CAH60202.1| chloroplast 30S ribosomal protein S4 [Grimmia ovalis] Length = 191 Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|218135254|ref|ZP_03464058.1| hypothetical protein BACPEC_03159 [Bacteroides pectinophilus ATCC 43243] gi|217990639|gb|EEC56650.1| hypothetical protein BACPEC_03159 [Bacteroides pectinophilus ATCC 43243] Length = 197 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 105/209 (50%), Gaps = 15/209 (7%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ K R + + G K K S +GLQLR KQK Sbjct: 1 MAVNRVPVLKRCRSLDLDPIYLGVDKKSKRKAKNA--------GRKISEYGLQLREKQKA 52 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + EK FR+ +K+A++ G + NL+ LE RLD +++R F T ARQ V+H Sbjct: 53 KFIYGVL-EKPFRNYYKKAEKMSGQSGENLMILLELRLDNVIFRMGFARTRKEARQIVDH 111 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVA 177 +HVLVNG+ VNI SY K GDVIE+++KSK + + R VPE++ + + + Sbjct: 112 KHVLVNGKRVNIPSYLVKAGDVIEIREKSKGSERYKQILDATSGRVVPEWLEADAEALKG 171 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+ V + L+VE YS+ Sbjct: 172 SVKAVPTRDI---IDVPVNEMLIVELYSK 197 >gi|11228635|gb|AAG33103.1| small ribosomal protein 4 [Dicranum muehlenbeckii] Length = 191 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I ++ + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|331091640|ref|ZP_08340474.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403397|gb|EGG82956.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 2_1_46FAA] Length = 197 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + ++ +S R+ S+ +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPIYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ F +A + G T NL+ LESRLD +V+R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYFAKASKMNGMTGDNLMILLESRLDNVVFRMGLARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GD IE+K+K K + + R VPE++ V+ +N+ + Sbjct: 114 VLVNGKQVNIPSYLVKAGDTIEIKEKHKGSQRYKDILEVTGGRLVPEWLDVDAENLKGSV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P V + L+VE YS+ Sbjct: 174 KELPLR---EAIDVPVDEMLIVELYSK 197 >gi|313892596|ref|ZP_07826183.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E] gi|329121298|ref|ZP_08249925.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965] gi|313118993|gb|EFR42198.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E] gi|327470232|gb|EGF15695.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965] Length = 197 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + + K RR G N++G PK+ + K S +G+QL KQK+K Sbjct: 1 MATNRNPRFKTSRRFGLNIYGHPKALKR-------QTADAHQKKQSEYGMQLAEKQKVKA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ E++F + +A R G NL++ LE RLD IVYRA F +I ARQ VNH Sbjct: 54 IY-NLLERQFYRYYDKARRMSGVVGENLLALLERRLDNIVYRAGFARSIRQARQMVNHGL 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 + VNG+ V+I SY + G V+ +++ + ++ ++L D+P YI + DN T Sbjct: 113 ISVNGKKVDIPSYSVQPGQVVSLRENYRSNEMFKQSFNELKTFDLP-YIEKSFDNWSVTL 171 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP +++PY + +VE YS+ Sbjct: 172 TRIPLR-EELPYKDEVNETYIVELYSK 197 >gi|63101059|gb|AAY33154.1| small ribosomal protein 4 [Symphysodontella cylindracea] Length = 195 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P S+ ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLTNKTPQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI AR VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARXLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY+CK D I +K + K + + + ++ +P +++ ++ +I L Sbjct: 117 VDIPSYQCKPQDXITIKNQRKSETIISKNIEFYQKYKIPNHLTYSYLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|50235350|gb|AAT70708.1| Rps4 [Brachythecium percurrens] gi|50235366|gb|AAT70716.1| Rps4 [Brachythecium percurrens] Length = 195 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFHQKYKIPNHLTYSFLEKKGLVTQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + +LVVE+YSR Sbjct: 174 DRESIGLKINESLVVEYYSR 193 >gi|63101061|gb|AAY33155.1| small ribosomal protein 4 [Cryptogonium phyllogonioides] Length = 194 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 3 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 58 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 59 LNYVRIARKTKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 118 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY+CK D I +K++ K + + + ++ +P +++ + +I L Sbjct: 119 PSYQCKPQDFITIKKQQKSETIITKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRE 175 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 SIGLKINELLVVEYYSR 192 >gi|293634049|gb|ADE60404.1| ribosomal protein subunit 4 [Pogonatum perichaetiale] Length = 190 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|37992705|gb|AAR06531.1| small ribosomal protein 4 [Thamniopsis sinuata] Length = 194 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN + Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIL 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + +++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQPKSEAIISKNIEFSQKVKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|28194789|gb|AAO33656.1|AF481011_1 ribosomal protein S4 [Pottia wilsonii] Length = 196 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPDLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + ++ K V + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQLMVTKNVDFYQKSQIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|3098188|gb|AAC15542.1| small ribosomal protein 4 [Plagiomnium affine] Length = 192 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + + ++ +P +++ N N +I Sbjct: 117 PSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD--- 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIDLKINELLVVEYYSR 190 >gi|49182730|gb|AAT57827.1| small ribosomal protein [Jubula hutchinsiae subsp. pennsylvanica] Length = 195 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G ++ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTGRASKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ PTI +ARQ VNHRH+ +N + Sbjct: 57 RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINNYT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VN+ SY C+ GD+I +K + K + + ++ ++P ++ N + + Sbjct: 117 VNVPSYNCEPGDIITIKNREKSQLIITKNINSFQKLEIPNHLIFNSIKLQGFVNQTIRR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --ESIDLKINELLVVEYYSR 193 >gi|21914186|gb|AAM81315.1| ribosomal protein subunit 4 [Rhodobryum umbraculum] Length = 198 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P + ++ K S + ++L KQK++ +YG I+E Sbjct: 4 RVKIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD ++++ PTI ARQ VNHRH+LVN R Sbjct: 60 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFQLGMAPTIPGARQLVNHRHILVNDRI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 120 VNIPSYRCKPEDSITIKDRPKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---L 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 DRESIGLKINELLVVEYYSR 196 >gi|50235342|gb|AAT70704.1| Rps4 [Brachythecium salebrosum] Length = 195 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|170516227|gb|ACB15115.1| small ribosomal protein 4 [Dioon spinulosum] Length = 194 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K P +R+ R+ S + ++L KQK++ +YG ++E Sbjct: 1 RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE R D ++R+ PTI ARQ VNHRH+LVN R Sbjct: 56 RQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRSGMAPTIPGARQLVNHRHILVNDRV 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK DVI V+ + + A + + L+++D +P +++++ +I S Sbjct: 116 VDIPSYRCKPRDVITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WISLKINELLVVEYYSR 192 >gi|17025841|gb|AAL32086.1| ribosomal protein 4 [Mitthyridium sp. Wall 1043] Length = 195 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + ++ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 117 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|22854735|gb|AAN09787.1| small ribosomal protein 4 [Sclerodontium pallidum] Length = 190 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K +++ + +++ VP +++ N +I L Sbjct: 117 YRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|281356805|ref|ZP_06243296.1| ribosomal protein S4 [Victivallis vadensis ATCC BAA-548] gi|281316932|gb|EFB00955.1| ribosomal protein S4 [Victivallis vadensis ATCC BAA-548] Length = 200 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 6/200 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 +KHK RRIG+ +WG PK P R Y G HG+ R+ K S +G L KQK+K YY IS Sbjct: 7 AKHKFCRRIGQCIWGDPKCPSVKRPYAAGPHGKGRRVKLSTYGELLMEKQKLKNYYA-IS 65 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+ + + +A G T L LE RLD +V+RA F PTIFAA+QFVNH H+LV+G+ Sbjct: 66 EKQLQIAYAKAKAGTGQTHEKLFRSLEQRLDAMVFRAGFAPTIFAAKQFVNHGHILVDGK 125 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 ++ S KEG VI + + + ++ E ++ +P Y+ V+ +N+ AT R P Sbjct: 126 RIDRSSCLVKEGQVISI--DAAKSPAIAEIAKKGNSTIPAYMEVDLENLKATLTRAP--- 180 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + PV ++ V+E+Y+R Sbjct: 181 QLEEIPVSVKIMSVIEYYAR 200 >gi|74273231|gb|ABA01315.1| ribosomal protein S4 [Ancistrothyrsus sp. LBF-2005] Length = 187 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 10/193 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P+ G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRPI----AGSALQNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I VK + K + + R +P++++++ +I S + Sbjct: 116 KPRDLITVKDEQKSKDLIQNSLDSFPPGRKLPKHLTLDPFQYKGLVNQIIDSK---WVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 QINELLVVEYYSR 185 >gi|77862529|gb|ABB04537.1| small ribosomal protein 4 [Exormotheca pustulosa] Length = 201 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGVLPGLTNKTLKLKSGY---INQSISNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N VNI SY CK DVI +K K + + + ++ +P +++ + + Sbjct: 117 LINNNIVNIPSYTCKPKDVITIKNGPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 EIIDR---EWILLKINELLVVEYYSR 199 >gi|42794634|gb|AAS45716.1| Rps4 [Cavendishia complectens] gi|42794673|gb|AAS45733.1| Rps4 [Psammisia ulbrichiana] gi|42794693|gb|AAS45743.1| Rps4 [Satyria vargasii] Length = 211 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|12330512|gb|AAG52793.1| ribosomal protein 4 [Pleuridium subulatum] Length = 189 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQAMIIKNIDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|288870170|ref|ZP_06113170.2| ribosomal protein S4 [Clostridium hathewayi DSM 13479] gi|288868139|gb|EFD00438.1| ribosomal protein S4 [Clostridium hathewayi DSM 13479] Length = 197 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 106/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R +R K S +GLQLR KQK K Sbjct: 1 MAVDRVPVLKRCRSLGLDPIYLGIDKKSNREL------KRANRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A R G NL+ LE RLD +V+R F T RQ V+H+ Sbjct: 55 IYGVL-EKPFRNYYAKASRMNGMVGENLMILLERRLDNVVFRMGFGRTRRETRQMVDHKS 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI SY K GDVIEVK+K K A + + A R P ++ V+H+N+ T Sbjct: 114 ILVNGKCVNIPSYLVKAGDVIEVKEKCKGNARFKDVVETTAGRLTPAWVDVDHENLRGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KELPTRDE---IDVPVNEMLIVELYSK 197 >gi|17025858|gb|AAL32094.1| ribosomal protein 4 [Mitthyridium sp. Wall 3848] Length = 199 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 KI RR+G K P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGFGVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SY+CK D I +K + K +++ ++ + + P +++ N +I Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSIEKKGLINQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|20531096|gb|AAM27369.1| ribosomal protein 4 [Dicnemon semicryptum] Length = 192 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LNYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A +++ +++ VP +++ + +I L Sbjct: 117 PSYRCKPQDFITIKNRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|78369637|gb|ABB43048.1| ribosomal protein 4 [Calymperes hispidum] Length = 199 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGILSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -LTERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R VNI SY CK D I +K + K +++ + + + +P ++ N ++ Sbjct: 117 NNRIVNIPSYPCKLHDFITIKDQQKYQTMIVQNIKFSPKYKIPSHLIFNSVEQKGVVNQL 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197 >gi|118577621|gb|ABL07176.1| small ribosomal protein 4 [Piper stipulare] Length = 187 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P + S L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYR Sbjct: 56 RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRMVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I + + + V + A R ++P++++++ +I S + Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|46811040|gb|AAT01838.1| small ribosomal protein 4 [Phyllothallia nivicola] Length = 200 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K RR+G K Y + K S + ++L KQK++ +YG + Sbjct: 1 GPRAKSTRRLGFLPGLTNKILELNLGYT---NQSTVNKKISQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN Sbjct: 57 TERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIIVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184 +V+I SY C+ D I + + + + + + L E +P +++ + + ++ + Sbjct: 117 DTVDIPSYSCEPKDTITISNRRESQSIITKNMNLFRENKIPNHLTFDSTKSRGSVNQVIN 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 R---EWIDLKINELLVVEYYSR 195 >gi|42556450|gb|AAS19820.1| small ribosomal protein 4 [Lepidolaena taylorii] Length = 191 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKKLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHILINNETVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ + K + + + ++P ++S+N + + Sbjct: 117 SYNCEPGDIITIRNREKSQSIITRNMNSFHKSEIPNHLSLNSTQLRGSINTTIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKVNELLVVEYYSR 189 >gi|47606902|gb|AAT36371.1| ribosomal protein subunit 4 [Goniobryum subbasilare] Length = 195 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNIYFYQKYKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42405300|gb|AAS13476.1| rps4 small ribosomal protein [Arbusculohypopterygium arbusculum] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYVV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|238922856|ref|YP_002936369.1| 30S ribosomal protein S4 [Eubacterium rectale ATCC 33656] gi|259495279|sp|C4ZBU5|RS4_EUBR3 RecName: Full=30S ribosomal protein S4 gi|238874528|gb|ACR74235.1| 30S ribosomal protein S4 [Eubacterium rectale ATCC 33656] gi|291523756|emb|CBK89343.1| SSU ribosomal protein S4P [Eubacterium rectale DSM 17629] gi|291528778|emb|CBK94364.1| SSU ribosomal protein S4P [Eubacterium rectale M104/1] Length = 197 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + R+ R K S +GLQLR KQK K Sbjct: 1 MAVNKVPVLKRCRSLGLEPSYLGYDKKSRRNLT------RANRKVSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +K+AD+ +G T NL++ LESR+D +++R F T ARQ V+H+ Sbjct: 55 IYGVL-EKPFRNYYKKADQMKGLTGLNLMTILESRIDNVIFRLGFARTRKEARQIVDHKF 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179 V VNG+ VNI SY K GDVIE+K+ K + + ++A R VPE++ V+ + + T Sbjct: 114 VTVNGKVVNIPSYLVKAGDVIEIKESKKNTQRMKDIVEVAGGRIVPEWLDVDAEKLQGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KDLPTREQ---IDVPVDEMLIVELYSK 197 >gi|63078634|gb|AAY29403.1| ribosomal protein S4 [Tortella tortuosa] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRFGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|293634055|gb|ADE60407.1| ribosomal protein subunit 4 [Pogonatum subulatum] Length = 191 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A +++ +++ +P +++ N +I L Sbjct: 117 SYRCKPKDFIIIKNQQESQAIIVKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|118577575|gb|ABL07153.1| small ribosomal protein 4 [Piper excelsum] Length = 187 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P + S L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYR Sbjct: 56 RIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I + + + V + A R ++P++++++ +I S + Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|47606930|gb|AAT36385.1| ribosomal protein subunit 4 [Pyrrhobryum medium] Length = 196 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGALPGXTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T + LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K + K + + ++ +P +++ + +I Sbjct: 117 IVDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYSFLEKKGVVNQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDRESISLKINELLVVEYYSR 194 >gi|67036106|gb|AAY62979.1| small ribosomal protein subunit 4 [Leskea gracilescens] Length = 192 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|78102661|gb|ABB21544.1| small ribosomal protein 4 [Plagiochila fruticella] Length = 189 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGVLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNH+H+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHKHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWLILKINELLVVE 189 >gi|42794632|gb|AAS45715.1| Rps4 [Cavendishia capitulata] Length = 211 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ V H Sbjct: 57 GFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKSKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|28194699|gb|AAO33611.1|AF480966_1 ribosomal protein S4 [Oxystegus sinuosus] gi|28194751|gb|AAO33637.1|AF480992_1 ribosomal protein S4 [Bryoerythrophyllum recurvirostrum] Length = 196 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|63191807|gb|AAY34863.1| small ribosomal protein subunit 4 [Dialytrichia mucronata] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|50235330|gb|AAT70698.1| Rps4 [Scorpiurium circinatum] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFHQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42794679|gb|AAS45736.1| Rps4 [Satyria cerander] Length = 211 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K S + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRRTQSRFVKKK--KSQYHIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WIGLKIKELLVVEYYSR 207 >gi|63101047|gb|AAY33148.1| small ribosomal protein 4 [Ischyrodon lepturus] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEVIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|42405306|gb|AAS13479.1| rps4 small ribosomal protein [Thamniopsis incurva] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI AARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTISAARQLVNHRHIVVNNYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQPKSEAIITKNIEFYQKIKIPNHLTSNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035676|gb|AAY62769.1| small ribosomal protein subunit 4 [Campylopodiella stenocarpa] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+ + + K S + ++L KQK++ +YG I+E++ Sbjct: 3 IIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 58 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI Sbjct: 59 LNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNI 118 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K V + +++ VP +++ N +I L Sbjct: 119 PSYRCKPQDFITIKNRQKSQFIVAKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LNKE 175 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 SIGLKINELLVVEYYSR 192 >gi|37992495|gb|AAR06426.1| small ribosomal protein 4 [Diploneuron connivens] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITEQ 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ +NHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQILDRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIGLKINELLVVEYYSR 192 >gi|46486560|gb|AAS98716.1| ribosomal protein subunit 4 [Bescherellia cryphaeoides] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 VDIASYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|46486566|gb|AAS98719.1| ribosomal protein subunit 4 [Mniodendron camptotheca] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ ++ ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTAQLKSNF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ ++ +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|63191873|gb|AAY34896.1| small ribosomal protein subunit 4 [Leptobarbula berica] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|50235356|gb|AAT70711.1| Rps4 [Brachythecium bolanderi] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T + E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|50235344|gb|AAT70705.1| Rps4 [Scleropodium touretii] gi|50235372|gb|AAT70719.1| Rps4 [Scleropodium obtusifolium] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|289599959|gb|ADD12930.1| ribosomal protein S4 [Tetracera portobellensis] Length = 189 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I S Sbjct: 56 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I VK + K A + + ++P++++++ +I S Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSPHEELPKHLTLHAFQYKGLVNQIIDSK---WV 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|28194711|gb|AAO33617.1|AF480972_1 ribosomal protein S4 [Phascum cuspidatum] Length = 196 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINNRKKSQVIITKNVDFYQKSKIPTHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|67036002|gb|AAY62927.1| small ribosomal protein subunit 4 [Diaphanodon blandus] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67035616|gb|AAY62739.1| small ribosomal protein subunit 4 [Pleurophascum grandiglobum] Length = 193 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIPSSLKD 188 SYRCK D I +K + A +++ + VP +++ N +I L + Sbjct: 117 SYRCKPQDFITIKDRQTSQAIIIKNKNVDFSQKYKVPNHLTFNSLEKKGLVNQI---LDE 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|63100983|gb|AAY33116.1| small ribosomal protein 4 [Vesicularia vesicularis] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIAGARQLVNHRHILVNHCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI YRCK D+I +K + K + + + +R +P +++ + +I L Sbjct: 117 NISGYRCKPQDIITIKNQQKSETIINKNIEFYQRSKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|50235346|gb|AAT70706.1| Rps4 [Brachythecium leibergii] gi|50235368|gb|AAT70717.1| Rps4 [Brachythecium velutinum] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42556420|gb|AAS19805.1| small ribosomal protein 4 [Herbertus sendtneri] Length = 188 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPSLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY Sbjct: 57 RIARKTKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIPSYN 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 C+ GD+I +K K K + + + L ++ +P +++ + + + + + + Sbjct: 117 CEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLYGSINQTINR---EWINL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|28194765|gb|AAO33644.1|AF480999_1 ribosomal protein S4 [Tortula subulata var. subinermis] Length = 196 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIAKKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|50235332|gb|AAT70699.1| Rps4 [Eurhynchium fuegianum] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNYCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|118626055|emb|CAL39336.1| small ribosomal protein 4 [Nowellia curvifolia] Length = 191 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + +Y K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLSNKTLKSKSNYIDP---STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD +R PTI ARQ VNH H+ +N ++I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTXFRLGMAPTIPGARQLVNHGHISMNNNIIDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K + + + + L ++ P +++ N + + ++ + Sbjct: 117 SYNCQPGDIITIRNKLESRSMITKNINLFQKLKTPSHLTFNLTELQGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|28194705|gb|AAO33614.1|AF480969_1 ribosomal protein S4 [Acaulon triquetrum] gi|28194707|gb|AAO33615.1|AF480970_1 ribosomal protein S4 [Pottia recta] gi|28194733|gb|AAO33628.1|AF480983_1 ribosomal protein S4 [Pottia davalliana] Length = 196 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|242910210|ref|YP_002970646.1| ribosomal protein S4 [Alsophila spinulosa] gi|218454879|gb|ACK77216.1| ribosomal protein S4 [Alsophila spinulosa] Length = 207 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 15/213 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ + K+ RR+ K+ P TR Q K S F ++L AKQ++ Sbjct: 1 MSRYRGPRLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG ++E++ + A +++G T + LE RLD I++ + TI AARQ VNH Sbjct: 57 RFNYG-LTERQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHD 173 RH+LVN R V++ SYRCK D+I V+ + + + R ++P++++ + Sbjct: 116 RHILVNDRIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGN 175 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 176 RPKGLVNRI---ANRESIDLNINELLVVEYYSR 205 >gi|18920783|gb|AAL82436.1| ribosomal protein system 4 [Pseudotaxiphyllum laetevirens] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R VPTI ARQ VNHRH+L+N Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMVPTIPGARQLVNHRHILINDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSQAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67036116|gb|AAY62984.1| small ribosomal protein subunit 4 [Puiggariopsis aurifolia] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQATSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035618|gb|AAY62740.1| small ribosomal protein subunit 4 [Braunfelsia dicranoides] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSGS---INQSASNKKVSQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNHVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRVV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A +++ +++ VP +++ + +I L Sbjct: 117 NIPSYRCKPRDFITIKDRQKSQAIIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|63191747|gb|AAY34833.1| small ribosomal protein subunit 4 [Brachymitrion jamesonii] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CEIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKTSQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|158318038|ref|YP_001510546.1| RNA-binding S4 domain-containing protein [Frankia sp. EAN1pec] gi|158113443|gb|ABW15640.1| RNA-binding S4 domain protein [Frankia sp. EAN1pec] Length = 201 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 7/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K+ R IG L + R Y PG HG+ RK+ Y +LR KQ+++ Y IS Sbjct: 5 PVAKLSRSIGLPLTDKAARYFENRPYPPGPHGRGRKTMSPY-KERLREKQRLRFQY-HIS 62 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 EK+ R F EADR G T H LI LE+RLD +V RA F TI+ ARQFV+HRHV VN Sbjct: 63 EKQLRRAFDEADRGAGRTGHLLIEDLETRLDAVVLRAGFAKTIYQARQFVSHRHVQVNSS 122 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLA--SVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184 V+ YR + GDV+ + +S+ +A ++ +Q A P Y+ V+ +VA R P+ Sbjct: 123 RVDRPGYRVQPGDVVTIAGRSRPMAPFRIVAETQPAGTAPPAYLDVDRTALVAVLSRRPT 182 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV+ LVVE+Y+R Sbjct: 183 RPE---IPVVCDEQLVVEYYAR 201 >gi|238763710|ref|ZP_04624669.1| 30S ribosomal protein S4 [Yersinia kristensenii ATCC 33638] gi|238698012|gb|EEP90770.1| 30S ribosomal protein S4 [Yersinia kristensenii ATCC 33638] Length = 154 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/158 (40%), Positives = 99/158 (62%), Gaps = 5/158 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QLR KQK+++ YG + E++FR+ +KEA R +G+T NL+ LE RLD +VYR F T Sbjct: 1 MQLREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATR 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168 +RQ V+H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ Sbjct: 60 AESRQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWL 119 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+ M F RIP + +L+VE YS+ Sbjct: 120 EVDAVKMEGVFKRIPERTD---LSADINEHLIVELYSK 154 >gi|78102647|gb|ABB21537.1| small ribosomal protein 4 [Plagiochila dusenii] Length = 189 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCQPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|67035662|gb|AAY62762.1| small ribosomal protein subunit 4 [Cheilothela chloropus] Length = 192 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 LNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNRQKSQAMIIKNLTFSQKAKVPNHLTFNSLENKGLVNQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|37992443|gb|AAR06400.1| small ribosomal protein 4 [Calyptrochaeta brownii] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + + + + + + +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDQRESEDIINKNIEFYQNSKIPNHLNYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|75858244|gb|ABA28696.1| small ribosomal protein 4 [Tetracymbaliella cymbalifera] Length = 191 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTGKTL---EPKSSSIDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNH+H+L+N V+I Sbjct: 57 KYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHQHILINEDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCSPGDIITIRNKEKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQMINR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|328541146|gb|AEB21797.1| ribosomal protein S4 [Lepidozia setigera] Length = 190 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ SY K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGAPPGLTSKTLKPKSSY---NDRSASNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD ++R TI ARQ VNH+H+ +N V+I SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHKHISINNNIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 C+ GD+I ++ K K + + + L + +P +++ + + + + + Sbjct: 117 NCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDPIKLCGSINQTINR---EWIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|170516229|gb|ACB15116.1| small ribosomal protein 4 [Bowenia spectabilis] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K P +R+ R+ S + ++L KQK++ +YG ++E Sbjct: 1 RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE R D ++R TI ARQ VNHRH+LVN R Sbjct: 56 RQLLQYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHILVNDRV 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK DVI V+ + + A + + L+++D +P +++++ +I S Sbjct: 116 VDIPSYRCKPRDVITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WISLKINELLVVEYYSR 192 >gi|12330452|gb|AAG52763.1| ribosomal protein 4 [Takakia lepidozioides] Length = 189 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + K+P + Y ++ K S + ++L KQK++ ++G ++E++ Sbjct: 1 RLGASPGLTNKTPQSKSGY---INQSTSNKKISQYRIRLEEKQKLRFHHG-VTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T + LE RLD +++R PTI ARQ VNHRH+LVN R+VNI S+ Sbjct: 57 VRIARRAKGSTGQVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRTVNIPSF 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I K + K A + + +++ ++P ++++N +I Sbjct: 117 RCKPQDFITTKDRQKSQAVITKNMDCSQKSEMPNHLTLNSSQKRGLVNQIIDR---ESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|88856256|ref|ZP_01130916.1| 30S ribosomal protein S4 [marine actinobacterium PHSC20C1] gi|88814575|gb|EAR24437.1| 30S ribosomal protein S4 [marine actinobacterium PHSC20C1] Length = 220 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 8/205 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 R SK ++ R +G L + + R Y PG HG+ ++ + S + ++LR KQ+++ YG Sbjct: 17 RTRSKTRLSRALGIALTPKAAKYLEKRPYAPGEHGRTKRKQDSDYAVRLREKQRLRAQYG 76 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I E + + F+EA ++ G T NL+ LE RLD ++ R+ T ARQ + HRH+LV Sbjct: 77 -IREAQLKIQFEEARKTPGLTGENLVEQLEMRLDALLVRSAIARTTAQARQMIVHRHILV 135 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATF 179 +G+ V+ S+R K G ++ VK +S+ + ++ DV P Y+ V D + A Sbjct: 136 DGQLVDRPSFRVKPGQLMHVKARSEGMEIFQVSAAGGHVDVLPKTPGYLEVEIDKLQARL 195 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204 VR P + PV + LVVE+Y Sbjct: 196 VRRPKRAE---VPVTCEVQLVVEYY 217 >gi|121761814|gb|ABM64993.1| ribosomal protein S4 [Orthomnion bryoides] gi|121761825|gb|ABM64998.1| ribosomal protein S4 [Orthomnion nudum] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I + Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILNRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|42794728|gb|AAS45759.1| Rps4 [Thibaudia parvifolia] Length = 211 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S +K S + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQXXXXXKK--KSQYHIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++ +N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKGKRKRVPYHLXLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|218157229|gb|ACK58431.1| ribosomal protein subunit 4 [Polytrichastrum formosum] gi|293633983|gb|ADE60371.1| ribosomal protein subunit 4 [Hebantia rigida] gi|293634129|gb|ADE60444.1| ribosomal protein subunit 4 [Polytrichum subpilosum] Length = 190 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|42794677|gb|AAS45735.1| Rps4 [Satyria boliviana] gi|42794689|gb|AAS45741.1| Rps4 [Satyria polyantha] Length = 211 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|37992419|gb|AAR06388.1| small ribosomal protein 4 [Aerobryum speciosum] Length = 193 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+ Sbjct: 57 LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 IPSYRCKPQDFITIKNQRKSETIIGKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|12642252|gb|AAK00208.1| rps4 [Fissidens subbasilaris] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGILQGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLPEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDHI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K +++ +++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITIKDQQKYQIMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|59803309|gb|AAX07763.1| Rps4 [Pallavicinia lyellii] Length = 201 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G L G +RS +K S + ++L K K++ +YG Sbjct: 3 YRGPRAKIIRRLGA-LPGVSHKMRXSRSXYTNXXXXGKK--ISXYRIRLEEKXKLRFHYG 59 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E+ + A R++G T L+ LE RLD I++R PTI +ARQ VNHRH+L+ Sbjct: 60 -LTERHLVKYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPSARQLVNHRHILI 118 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182 N +VNI SY C+ D+I +K + + + + + L+ E+ +P +++ + + RI Sbjct: 119 NAYTVNIPSYNCETRDIITIKNRHESQSLITKNMNLSREQRIPNHLTFDLTRFRGSVNRI 178 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 TDR---EWIGLKINELLVVEYYSR 199 >gi|89147836|gb|ABD62766.1| ribosomal protein 4 [Noteroclada confluens] Length = 192 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + Y ++ K S + ++L KQK++ +YG ++E++ Sbjct: 3 IRRLGVLPGLTSKIVESKSGY---INQPTSSKKVSQYRIRLEEKQKLRFHYG-LTERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 59 KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHILINDNMVDIP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY C+ GDVI VK + + + + + + +P ++++N + ++ + Sbjct: 119 SYNCEPGDVITVKNRRESQSIIAKNMEFQRPKIPNHLTLNSIPFQGSVNQVINR---ECI 175 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 DLKINELLVVEYYSR 190 >gi|121761775|gb|ABM64974.1| ribosomal protein S4 [Plagiomnium rhynchophorum] gi|121761798|gb|ABM64985.1| ribosomal protein S4 [Plagiomnium integrum] gi|121761800|gb|ABM64986.1| ribosomal protein S4 [Plagiomnium rhynchophorum] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 IDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---FIDLKINELLVVEYYSR 193 >gi|37992593|gb|AAR06475.1| small ribosomal protein 4 [Meteoriopsis reclinata] gi|67035996|gb|AAY62924.1| small ribosomal protein subunit 4 [Barbellopsis trichophora] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|28194831|gb|AAO33677.1|AF481032_1 ribosomal protein S4 [Syntrichia papillosa] Length = 196 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L+N R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|47606914|gb|AAT36377.1| ribosomal protein subunit 4 [Mesochaete undulata] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN + Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDQI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY+CK D I +K + K A + + ++ +P ++ + +I L Sbjct: 117 VDIPSYQCKPQDFITIKDRQKSQAIISKNIYFYQKYKIPNHLIYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|329938951|ref|ZP_08288325.1| 30S ribosomal protein S4 [Streptomyces griseoaurantiacus M045] gi|329301836|gb|EGG45729.1| 30S ribosomal protein S4 [Streptomyces griseoaurantiacus M045] Length = 204 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A +++G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-VSERQLVRAYERAAKTQGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG V+ S+R K DV+ V+++S++ A + E + P Y+ VN + Sbjct: 119 IEVNGHKVDKPSFRVKPDDVVMVRERSREKTLFSIAREGGFAPEGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204 >gi|325663035|ref|ZP_08151485.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086642|ref|ZP_08335719.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470489|gb|EGC73719.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409808|gb|EGG89243.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 197 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + ++ +S R+ S+ +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPIYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ F +A + G T NL+ LESRLD +V+R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYFAKAQKMNGMTGDNLMILLESRLDNVVFRLGLARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+K+K+K + + R VP+++ + +N+ T Sbjct: 114 VLVNGKQVNIPSYLVKAGDVIEIKEKNKGSQRYKDILEVTGGRMVPDWLEADAENLKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P V + L+VE YS+ Sbjct: 174 KELPLR---EAIDVPVDEMLIVELYSK 197 >gi|12642258|gb|AAK00211.1| rps4 [Splachnum sphaericum] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CKIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P ++ N +I Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIGLKINELLVVEYYSR 192 >gi|63078638|gb|AAY29405.1| ribosomal protein S4 [Tortella tortuosa] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|18568420|gb|AAL76079.1| ribosomal protein system 4 [Calliergon cordifolium] Length = 193 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+ Sbjct: 57 LLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 IPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|67035897|gb|AAY62875.1| small ribosomal protein subunit 4 [Orthotheciella varia] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|33413225|emb|CAD86748.1| ribosomal protein small subunit 4 [Oncophorus wahlenbergii] Length = 188 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNRQKSQAMIIKNVDFSQKTKIPNHLTFNSLEKKGLVNQI---LDQESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|49182770|gb|AAT57847.1| small ribosomal protein [Odontolejeunea lunulata] Length = 192 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTGKISKTK------IDRSVLNKKISQYRIRLEEKQKLRFHYG-LTE 53 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ TI +ARQ VNH+H+ +N Sbjct: 54 RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHKHIFINNDI 113 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNMNLSKKLQIPNHLTFDSIQLRGLVNQTIRR- 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 --EWINLKINELLVVEYYSR 190 >gi|3098220|gb|AAC15558.1| small ribosomal protein 4 [Macromitrium levatum] Length = 199 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPCGRIIRRLGALPGSTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K + + ++ +P ++ N +I Sbjct: 117 NYRMVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRELIGLKINELLVVEYYSR 197 >gi|46811004|gb|AAT01820.1| small ribosomal protein 4 [Fossombronia foveolata] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G + Y L ++ S+ + ++L KQK++ +YG ++E Sbjct: 1 RAKMIRRLGVLPGLTDRIVEPRSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ + Sbjct: 57 RQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY CK GDVI V+ + K + + ++ L ++ P +++++ + + + Sbjct: 117 VNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDLTRLRGSINQTIDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---WIDLKINELLVVEYYSR 193 >gi|46810998|gb|AAT01817.1| small ribosomal protein 4 [Pellia sp. LLF-2004] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 8/201 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K + S G +K S + ++L KQK++ +YG + Sbjct: 1 GPRTKIIRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVRIARKAKGSTGQILSQTLEMRLDNIIFRLGMSPTIPGARQLVNHRHILIND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 +V+I SY C+ DVI V + K+ + + VP +++ + + + Sbjct: 117 DTVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---ECIDLKINELLVVEYYSR 193 >gi|29027190|gb|AAN47157.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027192|gb|AAN47158.1| small ribosomal protein 4 [Hymenodontopsis mnioides] gi|29027194|gb|AAN47159.1| small ribosomal protein 4 [Hymenodontopsis mnioides] Length = 194 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIGKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63191697|gb|AAY34810.1| small ribosomal protein subunit 4 [Plagiobryum zierii] Length = 195 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + A + + L E P +++ N +I L Sbjct: 117 VNIPSYRCKPEDSITIKDRQESQAVISKNLNLYQEYKTPNHLTYNFLKKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67035865|gb|AAY62859.1| small ribosomal protein subunit 4 [Rhaphidostichum schwaneckeanum] Length = 192 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQPASNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + E+ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYEKSKIPNHLTYNSLEKKGLINQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|328488156|gb|AEB19891.1| small ribosomal protein 4 [Pachyschistochila childii] Length = 191 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G + K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGISPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVN---ERIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|293634063|gb|ADE60411.1| ribosomal protein subunit 4 [Polytrichadelphus ciliatus] Length = 190 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 7/194 (3%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y +K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGYINQQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SY Sbjct: 58 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A ++ +++ +P +++ N +I L Sbjct: 118 RCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 174 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 LKINELLVVEYYSR 188 >gi|28194725|gb|AAO33624.1|AF480979_1 ribosomal protein S4 [Pseudocrossidium hornschuchianum] Length = 196 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + +++ +P ++S N +I Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDSSQKSKIPNHLSFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LNQESIGLKINELLVVEYYSR 194 >gi|17025845|gb|AAL32088.1| ribosomal protein 4 [Mitthyridium sp. Wall 3653] Length = 199 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + ++ K S + ++L KQK++ +YG ++E Sbjct: 5 RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 60 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 61 RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNM 120 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 121 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNFVEKKGLVNQI---L 177 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 DQESIGLKINELLVVEYYSR 197 >gi|28194769|gb|AAO33646.1|AF481001_1 ribosomal protein S4 [Tortula canescens] gi|28194771|gb|AAO33647.1|AF481002_1 ribosomal protein S4 [Tortula canescens] Length = 196 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + ++ K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|289599907|gb|ADD12904.1| ribosomal protein S4 [Hibbertia cuneiformis] Length = 189 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I S Sbjct: 56 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I VK + K A + + ++P+Y++++ +I S Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSSHEELPKYLTLHPFQYKGLVNQIIDSK---WV 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|21914158|gb|AAM81301.1| ribosomal protein subunit 4 [Rosulabryum capillare] Length = 194 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 NIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVTQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|283824452|gb|ADB43042.1| small ribosomal protein 4 [Cyanolophocolea echinella] gi|283824454|gb|ADB43043.1| small ribosomal protein 4 [Cyanolophocolea echinella] gi|283824456|gb|ADB43044.1| small ribosomal protein 4 [Cyanolophocolea echinella] gi|283824458|gb|ADB43045.1| small ribosomal protein 4 [Cyanolophocolea echinella] gi|283824460|gb|ADB43046.1| small ribosomal protein 4 [Cyanolophocolea echinella] gi|283824464|gb|ADB43048.1| small ribosomal protein 4 [Cyanolophocolea echinella] gi|283824466|gb|ADB43049.1| small ribosomal protein 4 [Cyanolophocolea echinella] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKILKPKASY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE R D ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 KYMRIARKAKGSTGQILLQLLEMRPDNTIFRLGMSSTIPEARQLVNHRHISINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD I +K K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDTITIKNKQKSQSVITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|33413253|emb|CAD86761.1| ribosomal protein small subunit 4 [Syrrhopodon prolifer] Length = 193 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+P S ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 KIIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VN Sbjct: 57 LLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKD 188 I SY+CK D I +K + K +++ + ++ +P ++ N +I L Sbjct: 117 IPSYQCKPQDFITIKDQQKYQTMIIKNTNFFSKHKIPNHLIFNSVEKKGLVNQI---LDQ 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|12642248|gb|AAK00206.1| rps4 [Archidium donnellii] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + ++ K S +L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLTNKTSELKSNS---VNQSTSNKKISQXRXRLXEKQKLRSHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNXI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K + V++ +++ VP ++++N +I L Sbjct: 117 VNIPSYRCKPQDFITIKNRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NHESIGLKINELLVVEYYSR 193 >gi|3098166|gb|AAC15531.1| small ribosomal protein 4 [Anomobryum julaceum] gi|24473830|gb|AAL82759.1| small ribosomal subunit protein 4 [Bryum russulum] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 NIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|121761881|gb|ABM65026.1| ribosomal protein S4 [Plagiomnium maximoviczii] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---FIDLKINELLVVEYYSR 193 >gi|328488180|gb|AEB19903.1| small ribosomal protein 4 [Schistochila sciurea] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ S + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKTLKTKSSS---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD V+R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMATTIPGARQLVNHRHILINNNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K + K + + + L + +P +++ + + + Sbjct: 117 SYNCELGDIIAIKNEQKSQSIITKNLNLLHKLKIPNHLTFDSTQLRGLINQKIHR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|78369643|gb|ABB43051.1| ribosomal protein 4 [Calymperes couguiense] Length = 198 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D I +K + K +++ + + + +P ++ N ++ Sbjct: 117 NRIVNIPSYQCKLQDFITIKDQQKYQTMIVKNTNFSPKYKIPSHLMFNSVEKKGVVNQL- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196 >gi|289599935|gb|ADD12918.1| ribosomal protein S4 [Hibbertia scandens] Length = 189 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I S Sbjct: 56 YVRIAGKAKGATGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I VK + K A + + ++P+Y++++ +I S Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSSHEELPKYLTLHPFQYKGLVNQIIDSK---WV 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|121761792|gb|ABM64982.1| ribosomal protein S4 [Orthomnion elimbatum] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRN 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|42794681|gb|AAS45737.1| Rps4 [Satyria grandifolia] Length = 211 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K S + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRRTQSRFVKKK--KSQYHIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|47606888|gb|AAT36364.1| ribosomal protein subunit 4 [Calomnion complanatum] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|77862521|gb|ABB04533.1| small ribosomal protein 4 [Corsinia coriandra] Length = 201 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR+G K+ Y ++ K S + ++L KQK++ + Sbjct: 1 SRYRGPRVKIIRRLGVLPGLTNKTLKIKSGY---INQSISNKKVSQYRIRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ Sbjct: 58 YG-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180 L+N VNI SY CK DVI +K + K + + + ++ +P +++ + + Sbjct: 117 LINNNIVNIPSYTCKPKDVITIKNQLKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLIN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 177 EIIDR---EWILLKINELLVVEYYSR 199 >gi|28194753|gb|AAO33638.1|AF480993_1 ribosomal protein S4 [Tortula inermis] gi|28194757|gb|AAO33640.1|AF480995_1 ribosomal protein S4 [Tortula inermis] gi|28194759|gb|AAO33641.1|AF480996_1 ribosomal protein S4 [Tortula inermis] gi|28194761|gb|AAO33642.1|AF480997_1 ribosomal protein S4 [Tortula inermis] Length = 196 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRFGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|67036058|gb|AAY62955.1| small ribosomal protein subunit 4 [Mahua enervis] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITMKNQRKSEAIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035953|gb|AAY62903.1| small ribosomal protein subunit 4 [Curvicladium kurzii] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|295093660|emb|CBK82751.1| SSU ribosomal protein S4P [Coprococcus sp. ART55/1] Length = 197 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 112/208 (53%), Gaps = 13/208 (6%) Query: 1 MSKRESSKHKIDRRIG-ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M+ + K R +G E ++ N R R K S +GLQLR KQK K Sbjct: 1 MAVDRTPVLKRCRSLGMEPMYLGIDKKSNRRP-------NRSNRKQSEYGLQLREKQKAK 53 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK FR+++ +A++ +G T NL++ LE RLD I++R F T ARQ V+H+ Sbjct: 54 FIYGVL-EKPFRNLYAKAEQQKGLTGPNLMTLLELRLDNIIFRLGFARTRREARQIVDHK 112 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVAT 178 HVLVNG+ VNI SY K GD IE+++KSK L + E VP +++ + DN+ Sbjct: 113 HVLVNGKCVNIPSYSVKPGDKIEIREKSKSLQRYKDIMAATEGVLVPGWLTADRDNLAGE 172 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V PS + V + L+VE YS+ Sbjct: 173 VVEKPSREQ---IDVPVNETLIVELYSK 197 >gi|37683552|gb|AAQ98827.1| small ribosomal protein 4 [Pogonatum fastigiatum] Length = 190 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFIAIKNRQESQAIIAKNINFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|37548835|gb|AAO32686.1| ribosomal protein 4 [Atrichum undulatum] Length = 192 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNRQEFQAITTRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIDLEINELLVVEYYSR 190 >gi|325678657|ref|ZP_08158267.1| ribosomal protein S4 [Ruminococcus albus 8] gi|324109707|gb|EGC03913.1| ribosomal protein S4 [Ruminococcus albus 8] Length = 198 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K + +G + + R ++ K S +GLQL+ KQK++ Sbjct: 1 MAVNREPILKRCKYLGISPMVMGVAKETKRDP-----NANKRKKVSEYGLQLKEKQKLRF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F F+ A + G NL++ LESRLD++V+R T ARQ V H H Sbjct: 56 IYGVL-EKQFHHYFEIAQKMEGQAGTNLLTILESRLDSVVFRMGLSMTRREARQLVVHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG+ V+I SYR K GDVI +K+ SK+ + + A R VP ++ ++ +N A Sbjct: 115 FLVNGKRVDIPSYRVKAGDVISLKENSKKSPKFKQIIEATAGRVVPTWLDMDKENQTAKV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P ++ +L+VE YS+ Sbjct: 175 VRMPVK---EDLDYEIEEHLIVELYSK 198 >gi|7576753|gb|AAF63973.1| small ribosomal protein 4 [Atrichum angustatum] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQEFQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLEINELLVVEYYSR 189 >gi|225026390|ref|ZP_03715582.1| hypothetical protein EUBHAL_00639 [Eubacterium hallii DSM 3353] gi|224956279|gb|EEG37488.1| hypothetical protein EUBHAL_00639 [Eubacterium hallii DSM 3353] Length = 197 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R + + + + R R K S +GLQLR KQK K Sbjct: 1 MAIDRTPVLKRCRSLDMDPVYLGVNKKSNRKLV------RSSRKISEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + A+R +G T NL+ LESRLD +V+R F T ARQ V H+H Sbjct: 55 IYGVL-EKPFRNYYATAERMKGLTGPNLMVLLESRLDNVVFRMGFARTRKEARQIVGHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNG+ VNI SYR K GDV+E+K+ K + + + VP ++ + + + T Sbjct: 114 VLVNGKCVNIPSYRIKAGDVVEIKENKKTMQRYKDIVEATGGVLVPAWLDADIEELKGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS V + L+VE YS+ Sbjct: 174 KELPSRD---MIDVPVNETLIVELYSK 197 >gi|222103542|gb|ACM44300.1| small ribosomal protein subunit 4 [Hylocomium splendens] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|209969115|emb|CAR92805.1| ribosomal protein S4 [Iris vorobievii] Length = 187 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P G L R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRP----RSGSDLKNHLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I K K + A + ++P +++++ +I S + Sbjct: 116 CKPRDIITTKDKQRSKALIQNFMASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|42794708|gb|AAS45749.1| Rps4 [Themistoclesia epiphytica] Length = 211 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 21/217 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPV--NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P N+R + K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKKRRLGALPGLTNKKPKPGNSRRTQS----RXXXXKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---------AERDVPEYIS 169 RHVLVNGR ++I SYRCK D+I ++ K A + + Q + VP +++ Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE--KSRALIQNSFQNLFDLPSHKGKRKRVPYHLT 173 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +N +I ++ + ++ LVVE+YSR Sbjct: 174 LNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|18920789|gb|AAL82439.1| ribosomal protein system 4 [Rhizofabronia sphaerocarpa] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ +NHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVNDFI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNKQNSQTIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NRESIGLKINELLVVEYYSR 193 >gi|157887714|emb|CAM33379.1| ribosomal protein S4 [Leptodontium paradoxum] gi|157887716|emb|CAM33380.1| ribosomal protein S4 [Leptodontium paradoxum] Length = 197 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 7/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSST--NQSTTSNKKISQYRIRLEEKQKLRFHYG-IT 57 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 58 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNR 117 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 118 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI--- 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 LDQESIGLKINELLVVEYYSR 195 >gi|12642260|gb|AAK00212.1| rps4 [Tayloria scabriseta] Length = 193 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 3 IRRLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 59 NYVRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 119 SYRCKPQDFITIKDRVKSQAIINKNIEFXQKYKIPNHLTYNSLKKQGLVNQI---LDRES 175 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 IGLKINELLVVEYYSR 191 >gi|11228623|gb|AAG33097.1| small ribosomal protein 4 [Campylopus atrovirens] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTFQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + + +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQSIIAKNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLNINELLVVEYYSR 189 >gi|67035949|gb|AAY62901.1| small ribosomal protein subunit 4 [Metaneckera menziesii] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + +L ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63191887|gb|AAY34903.1| small ribosomal protein subunit 4 [Weisiopsis anomala] Length = 199 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+ S + K S + ++L KQK++ +YG Sbjct: 1 YPGRRVRIIRRLGILPGLTNKTSQLKSSST---NQPTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N +NI SY CK D I +K + K A + + +++ VP ++ N +I Sbjct: 117 NNSLINIPSYCCKPQDFITIKDQQKSQALITKNIDFSQKQKVPNHLIFNLLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + VVE+YSR Sbjct: 177 ---LDPEXVGLKINELXVVEYYSR 197 >gi|63191757|gb|AAY34838.1| small ribosomal protein subunit 4 [Schlotheimia torquata] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTSQLK---YNSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++D +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDSITIKDRRKSQDIINKNIDFYQKDKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 174 ERELIGLKINELLVVEYYSR 193 >gi|42556488|gb|AAS19839.1| small ribosomal protein 4 [Porella platyphylla] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGFTAKTLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++G T L+ LE RLD ++ TI ARQ VNH+H+ +N +V+I Sbjct: 57 KYVRTARNAKGSTGQILLQLLEMRLDNTIFCLGMASTIPGARQLVNHKHISINNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ + K + + ++ ++P +++ + + + ++ + Sbjct: 117 SYNCEPGDIITIRNREKSQSIITRNINSFKKLEIPNHLTFDSTQLRGSVNQMINR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKVNELLVVEYYSR 189 >gi|67035620|gb|AAY62741.1| small ribosomal protein subunit 4 [Dicranoloma eucamptodontoides] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRMIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + K A +++ + +++ VP +++ + +I L Sbjct: 117 NIPSYRCKPQDFITVKNRQKSQAMIIKNLEFSQKYKVPNHLTFSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|317054794|ref|YP_004103261.1| 30S ribosomal protein S4 [Ruminococcus albus 7] gi|315447063|gb|ADU20627.1| ribosomal protein S4 [Ruminococcus albus 7] Length = 198 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K + +G + + R ++ K S +GLQL+ KQK++ Sbjct: 1 MAVNREPILKRCKYLGISPMVMGVAKETKRDP-----NANKRKKVSEYGLQLKEKQKLRF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F F+ A + G NL++ LESRLD++V+R T ARQ V H H Sbjct: 56 IYGVL-EKQFHHYFEIAQKMEGQAGTNLLTILESRLDSVVFRMGLSMTRREARQLVVHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 LVNG+ V+I SYR K GDVI +K+ SK+ + + A R VP ++ ++ +N A Sbjct: 115 FLVNGKRVDIPSYRIKAGDVISLKENSKKSPKFKQIIETTAGRVVPTWLDMDKENQTAKV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+P ++ +L+VE YS+ Sbjct: 175 VRMPVK---EDLDYEIEEHLIVELYSK 198 >gi|63078656|gb|AAY29414.1| ribosomal protein S4 [Weissia controversa var. densifolia] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|3098216|gb|AAC15556.1| small ribosomal protein 4 [Aulacomnium androgynum] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKDRQKSEAIINKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|30468054|ref|NP_848941.1| ribosomal protein S4 [Cyanidioschyzon merolae strain 10D] gi|30409154|dbj|BAC76103.1| 30S ribosomal protein S4 [Cyanidioschyzon merolae strain 10D] Length = 190 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 109/206 (52%), Gaps = 19/206 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G KSP N R+ PG H + + Y +QL+ KQK++ Sbjct: 1 MSRYLGPRVRIIRRLGILPAFTNKSP-NKRTGVPGEHAHKTRKLSEY-AVQLQEKQKLQY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG I+ + F++A +SR T L+ LE+RLD +VYRA F PT+ AARQ VNH H Sbjct: 59 YYG-ITNNQLARYFRQAKKSRASTGIELLKMLETRLDHVVYRAGFAPTLPAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG V I S+ C+ +IEVK KS A +P Y+ V + FV Sbjct: 118 VKVNGNQVTIASFACQVNHIIEVKAKSPSSAQ-----------LPPYLQVEN-----QFV 161 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ ++ + LVVE+Y+R Sbjct: 162 KMIQPVEKDWLAFRVNELLVVEYYTR 187 >gi|313904924|ref|ZP_07838295.1| ribosomal protein S4 [Eubacterium cellulosolvens 6] gi|313470181|gb|EFR65512.1| ribosomal protein S4 [Eubacterium cellulosolvens 6] Length = 197 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R + + K S +G+QLR KQK K Sbjct: 1 MAVDRVPVLKRCRSLGLDPTYLGIDKKSRRQL------RNNRRKISEYGMQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +ADR +G T NL++ LE RLD +++R T ARQ V+H+ Sbjct: 55 IYGVL-EKPFRNYYAKADRMKGQTGDNLMALLEMRLDNVIFRLALARTRKEARQIVDHKF 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATF 179 V VNG+ VNI SY+ K GDVIE+K+ K + + A A R VP ++ VN D + T Sbjct: 114 VTVNGKVVNIPSYQVKPGDVIEIKESKKTTQRMKDVADATAGRVVPAWLDVNADALQGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+ V + +VE YS+ Sbjct: 174 KQVPTRD---MIDVPVDDMSIVELYSK 197 >gi|20531126|gb|AAM27383.1| ribosomal protein 4 [Rhizomnium punctatum] Length = 193 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K P + K S + ++L KQK++ +YG I+E++ Sbjct: 1 KIIRRLGTLPGLSNKIPQLKSGS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+ Sbjct: 57 LLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNNRLVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + L+++ +P +++ N N +I L Sbjct: 117 IPSYRCKPQDFITIKDRQKSQTIIGKTLDLSQKSKIPNHLTYNSLNKKGFVTQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIELKINELLVVEYYSR 191 >gi|63078615|gb|AAY29394.1| ribosomal protein S4 [Tortella densa] Length = 193 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VN Sbjct: 57 LLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 IPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI---LDQ 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|11228621|gb|AAG33096.1| small ribosomal protein 4 [Campylopus argyrocaulon] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLNINELLVVEYYSR 189 >gi|121761750|gb|ABM64962.1| ribosomal protein S4 [Rhizomnium appalachianum] Length = 195 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKIPQLKSGS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNNRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + L+++ +P +++ N N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTIIGKTLDLSQKSKIPNHLTYNSLNKKGFVTQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIELKINELLVVEYYSR 193 >gi|37992639|gb|AAR06498.1| small ribosomal protein 4 [Papillaria imponderosa] Length = 193 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+ Sbjct: 57 LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 IPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|293634095|gb|ADE60427.1| ribosomal protein subunit 4 [Polytrichastrum ohioense] Length = 190 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R TI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|42556440|gb|AAS19815.1| small ribosomal protein 4 [Lejeunea catanduana] Length = 188 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 11/196 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K L K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTSKISKTK------LDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ TI ARQ VNH+H+ +N VNI Sbjct: 54 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHKHIFINDYIVNIP 113 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY+CK GD+I +K K+K + + + L+++ +P +++ + + + Sbjct: 114 SYKCKPGDIITIKNKAKSQSIINKNINLSQKLQIPNHLTFDSTKLQGLVNQTIRR---EW 170 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 171 IDLKINELLVVEYYSR 186 >gi|7109193|gb|AAF36672.1| ribosomal protein 4 [Amphidium lapponicum] Length = 190 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGVLPGLTNKTPQLKSXS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ V HRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVXHRHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + +++ +P ++S N +I L Sbjct: 117 YRCKPQDFITIKDRQKSQAMIXKNXDFSQKXKIPNHLSFNSLEKKGLVNKI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|22854683|gb|AAN09761.1| small ribosomal protein 4 [Bruchia flexuosa] Length = 191 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +L+ +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGVVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|28194667|gb|AAO33595.1|AF480950_1 ribosomal protein S4 [Didymodon australasiae] Length = 196 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K V + +++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINNRKKSQVMVAKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L+ + + LVVE+YSR Sbjct: 174 LEQESIGLKINELLVVEYYSR 194 >gi|67035905|gb|AAY62879.1| small ribosomal protein subunit 4 [Pseudocalliergon angustifolium] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992501|gb|AAR06429.1| small ribosomal protein 4 [Distichophyllum pulchellum] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKILQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N+ +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEVIINKNIEFYQKSKIPNHLTYNYLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CESIGLKINELLVVEYYSR 192 >gi|37992691|gb|AAR06524.1| small ribosomal protein 4 [Stenodictyon pallidum] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKLIRRLGVLPGLTNKIAELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + +++ +P +++ N +I Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEAIISKNIEFSQKIKIPNHLTYNFLEKKGLINQILDRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIGLKINELLVVEYYSR 192 >gi|37992439|gb|AAR06398.1| small ribosomal protein 4 [Callicostellopsis meridensis] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSPSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKVKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035913|gb|AAY62883.1| small ribosomal protein subunit 4 [Gradsteinia andicola] gi|67035915|gb|AAY62884.1| small ribosomal protein subunit 4 [Hygroamblystegium varium] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67036086|gb|AAY62969.1| small ribosomal protein subunit 4 [Renauldia mexicana] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|227345139|gb|ACP28122.1| small ribosomal protein 4 [Clasmatocolea trachypus] Length = 189 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGALPGLTSTTLKRKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-MTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY Sbjct: 57 MRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 C+ GD+I V+ K K + + + L ++ +P +++ + + + ++ Sbjct: 117 NCEPGDIITVRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMIDR---EWIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|49182671|gb|AAT57798.1| small ribosomal protein [Metzgeria frontipilis] Length = 195 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P +++ + ++ + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQKRYRSIIMETLNSVQKPGIPNHLAFDSTKIIGSVNRMINR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWIDLKINELLVVEYYSR 193 >gi|28194665|gb|AAO33594.1|AF480949_1 ribosomal protein S4 [Triquetrella tristicha] gi|28194735|gb|AAO33629.1|AF480984_1 ribosomal protein S4 [Triquetrella arapilensis] gi|157887692|emb|CAM33368.1| ribosomal protein S4 [Triquetrella arapilensis] gi|157887694|emb|CAM33369.1| ribosomal protein S4 [Triquetrella californica] gi|157887696|emb|CAM33370.1| ribosomal protein S4 [Triquetrella papillata] gi|157887700|emb|CAM33372.1| ribosomal protein S4 [Triquetrella patagonica] gi|157887702|emb|CAM33373.1| ribosomal protein S4 [Triquetrella patagonica] gi|157887704|emb|CAM33374.1| ribosomal protein S4 [Triquetrella mxinwana] gi|157887706|emb|CAM33375.1| ribosomal protein S4 [Triquetrella mxinwana] gi|157887708|emb|CAM33376.1| ribosomal protein S4 [Triquetrella mxinwana] gi|157887710|emb|CAM33377.1| ribosomal protein S4 [Triquetrella tristicha] gi|157887712|emb|CAM33378.1| ribosomal protein S4 [Triquetrella tristicha] Length = 196 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|63101003|gb|AAY33126.1| small ribosomal protein 4 [Rigodiadelphus robustus] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE+RLD ++R PTI ARQ VNHRH+LVN Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLETRLDNXIFRLGMAPTIPGARQLVNHRHILVNDCIX 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + + +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIXKNIEFYPKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|50235348|gb|AAT70707.1| Rps4 [Homalothecium megaptilum] Length = 195 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|37992701|gb|AAR06529.1| small ribosomal protein 4 [Thamniopsis cruegeriana] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKLIRRLGVLPGLTNKIPELKSSS---IAQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + +++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFSQKMKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992499|gb|AAR06428.1| small ribosomal protein 4 [Distichophyllidium nymanianum] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKVFQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CESIGLKINELLVVEYYSR 192 >gi|12330554|gb|AAG52814.1| ribosomal protein 4 [Catoscopium nigritum] Length = 189 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + +++ VP +++ N +I Sbjct: 117 RCKPQDFISIKDQQKSQAIIXKNIDFSQKAKVPNHLTFNFLQKNGLVNQILDRD---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|328488160|gb|AEB19893.1| small ribosomal protein 4 [Pachyschistochila nivicola] gi|328488162|gb|AEB19894.1| small ribosomal protein 4 [Pachyschistochila subhyalina] gi|328488166|gb|AEB19896.1| small ribosomal protein 4 [Pachyschistochila virescens] Length = 191 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G + K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGISPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|63145906|gb|AAY33891.1| small ribosomal protein 4 [Jensenia wallisii] Length = 198 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 KI RR+G L G + +RS K S + ++L KQK++ +YG ++ Sbjct: 3 PXRKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-LT 58 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH+L+N Sbjct: 59 ERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILINDD 118 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 VNI SY CK DVI +K + + + + + L E+ +P +++ + + +I Sbjct: 119 IVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVNQIIDR 178 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 ---EWISLKINELLVVEYYSR 196 >gi|37992615|gb|AAR06486.1| small ribosomal protein 4 [Orthostichidium pentagonum] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNSCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992471|gb|AAR06414.1| small ribosomal protein 4 [Crosbya straminea] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G L G +S K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGV-LPGLTNKVFELKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEVIINKNIEFYQKSKIPTHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CESIGLKINELLVVEYYSR 192 >gi|21220006|ref|NP_625785.1| 30S ribosomal protein S4 [Streptomyces coelicolor A3(2)] gi|256788896|ref|ZP_05527327.1| 30S ribosomal protein S4 [Streptomyces lividans TK24] gi|289772782|ref|ZP_06532160.1| 30S ribosomal protein S4 [Streptomyces lividans TK24] gi|26399515|sp|Q9KXP5|RS4_STRCO RecName: Full=30S ribosomal protein S4 gi|8249964|emb|CAB93385.1| 30S ribosomal protein S4 [Streptomyces coelicolor A3(2)] gi|289702981|gb|EFD70410.1| 30S ribosomal protein S4 [Streptomyces lividans TK24] Length = 204 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQPRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A ++ T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-LSERQLVRAYERASKTNMKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG+ V+ S+R + DV++V+++SK+ A + + + P Y+ VN + Sbjct: 119 IQVNGQKVDKPSFRVRPDDVVQVRERSKEKTLFTIAREGGFAPDGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204 >gi|3098210|gb|AAC15553.1| small ribosomal protein 4 [Tayloria orthodonta] Length = 190 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PT+ ARQ VNHRH+LVN R V+I S Sbjct: 57 YVRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNDRIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQQKSQAIINKNIEFSQKSKIPNHLTYNSLKKQGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|222103456|gb|ACM44257.1| small ribosomal protein subunit 4 [Niphotrichum ericoides] Length = 200 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E Sbjct: 5 RVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 60 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R Sbjct: 61 RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRI 120 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A +++ +++ +P +++ N +I L Sbjct: 121 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQI---L 177 Query: 187 KDVPYPVIMQPNLVVEFYS 205 + + LVVE++S Sbjct: 178 DHESIGLKINELLVVEYHS 196 >gi|121761802|gb|ABM64987.1| ribosomal protein S4 [Orthomnion dilatatum] gi|121761804|gb|ABM64988.1| ribosomal protein S4 [Orthomnion dilatatum] Length = 195 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N N +I Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRN 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIDLKINELLVVEYYSR 193 >gi|67035672|gb|AAY62767.1| small ribosomal protein subunit 4 [Brothera leana] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI R +G K+ + + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRXLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K V + +L+++ VP +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQFIVAKNIELSQKYKVPNHLTFNSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 KESIGLKINELLVVEYYSR 192 >gi|42794638|gb|AAS45717.1| Rps4 [Ceratostema lanigerum] Length = 211 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 21/217 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + +L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHXRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIXGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---------AERDVPEYIS 169 RHVLVNGR ++I SYRCK D+I ++ K A + + Q + VP +++ Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE--KSRALIQNSFQNLFDLPSHKRKRKRVPYHLT 173 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +N +I ++ + ++ LVVE+YSR Sbjct: 174 LNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|63191722|gb|AAY34821.1| small ribosomal protein subunit 4 [Anacolia webbii] Length = 191 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|80974158|gb|ABB53772.1| small ribosomal subunit protein 4 [Garovaglia zantenii] Length = 198 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGTLPRLTNKVPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T + LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLPNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 VNI SYRCK D I VK + + + ++ +P +++ +I Sbjct: 117 DCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196 >gi|67035716|gb|AAY62789.1| small ribosomal protein subunit 4 [Arthrocormus schimperi] Length = 199 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ S ++ K S + ++L KQK++ +YG Sbjct: 2 RGPRVKILRRLGTLSGLTNKTSQLKSSS---INQSISNKKVSQYRIRLEEKQKLRFHYG- 57 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 58 LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 117 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R VNI SY+CK D I +K + K +++ + + P ++ N +I Sbjct: 118 NRIVNIPSYQCKPQDFITIKDQQKYQKMIIKNTSFFPKYKTPNHLIFNSVEKKGLVNQI- 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 --LDQESIGLKINELLVVEYYSR 197 >gi|13358061|ref|NP_078335.1| 30S ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762225|ref|YP_001752581.1| 30S ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920263|ref|ZP_02690589.2| ribosomal protein S4 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508584|ref|ZP_02689436.2| ribosomal protein S4 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701633|ref|ZP_02553689.2| ribosomal protein S4 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|26399528|sp|Q9PPZ2|RS4_UREPA RecName: Full=30S ribosomal protein S4 gi|189045404|sp|B1AJD7|RS4_UREP2 RecName: Full=30S ribosomal protein S4 gi|11276522|pir||A82883 ribosomal protein S4 UU498 [imported] - Ureaplasma urealyticum gi|6899497|gb|AAF30910.1|AE002148_2 ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827802|gb|ACA33064.1| ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902667|gb|EDT48956.1| ribosomal protein S4 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182676037|gb|EDT87942.1| ribosomal protein S4 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700867|gb|EDU19149.1| ribosomal protein S4 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 202 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 114/209 (54%), Gaps = 12/209 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ S +K RR+G +L K R+YGPG HG +K K S +G QL KQK+ Sbjct: 1 MSRYTGSIYKKSRRLGFSLLENNKEFNSGKKRTYGPGQHGN-KKVKLSNYGQQLVEKQKL 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +++++FR +++ A G + NL+ LESRLD++VYRA F PT AARQ VNH Sbjct: 60 MFLYG-LNDRQFRRLYRVALGRPGVLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV-NHDNMVA 177 HVLVN + VNI S + G I +K KS ++ + ++I + + + VA Sbjct: 119 SHVLVNNKKVNIPSALVEVGSTIALKAKSLEIPLIKNTLNKPA----DFIELIDKEKKVA 174 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P + VVE+Y+R Sbjct: 175 KLARLPERNE---LPADVNEAYVVEWYNR 200 >gi|67035867|gb|AAY62860.1| small ribosomal protein subunit 4 [Radulina borbonica] Length = 191 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K K K + + + E+ +P +++ N +I Sbjct: 117 SYRCKPHDFITIKNKQKSETIINKNIEFYEKSKIPNHLTYNSLEKKGLINQILDRD---S 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|50235326|gb|AAT70696.1| Rps4 [Eurhynchium striatulum] gi|50235336|gb|AAT70701.1| Rps4 [Rhynchostegium serrulatum] Length = 195 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42794701|gb|AAS45746.1| Rps4 [Sphyrospermum ellipticum] Length = 211 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I +R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIXFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIIXAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|33413191|emb|CAD86731.1| ribosomal protein small subunit 4 [Dicranum acutifolium] Length = 190 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I ++ + K A +++ +++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|21914140|gb|AAM81292.1| ribosomal protein subunit 4 [Acidodontium heteroneuron] Length = 197 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 4 VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 59 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 60 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 119 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 120 NIPSYRCKPEDSITIKNRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 176 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RESIGLKINELLVVEYYSR 195 >gi|315504644|ref|YP_004083531.1| ribosomal protein s4 [Micromonospora sp. L5] gi|315411263|gb|ADU09380.1| ribosomal protein S4 [Micromonospora sp. L5] Length = 202 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 7/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K ++ R +G L + R Y PG+HG+ R++ Y ++L KQ+++ Y ++S Sbjct: 6 PKARLSRALGIPLTRKCVRYFERRPYPPGVHGRSRRTTSDYQ-VRLLEKQRLRHQY-NVS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R +F EA R G T L++ LE RLD +V RA +I+ ARQ V H H+ V+GR Sbjct: 64 EAQLRRLFDEAARGAGKTGETLVALLERRLDAVVLRAGLARSIYQARQLVAHGHITVDGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP--EYISVNHDNMVATFVRIPS 184 V+ S+R + G V+ V+++S+ L A+ A D Y+S + AT VR P+ Sbjct: 124 KVDRPSHRLRPGQVVGVRERSRALPPFQLAAAGAHADAQPRPYLSAQPAELRATLVREPA 183 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV+ LVVEFYSR Sbjct: 184 RHE---VPVVCDEQLVVEFYSR 202 >gi|63078626|gb|AAY29399.1| ribosomal protein S4 [Tortella humilis] gi|63191875|gb|AAY34897.1| small ribosomal protein subunit 4 [Tortella humilis] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQIMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|157786004|gb|ABV74174.1| small ribosomal protein 4 [Lopidium struthiopteris] Length = 198 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 7/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G KS + ++ K S + ++L KQK++ +YG I+ Sbjct: 2 PRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 58 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG Sbjct: 59 ERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGY 118 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I +K K K + + + +L ++ + +++ + +I Sbjct: 119 IVDIPSYRCKPQDFITIKNKQKYESIISKNIELYQKSKIANHLTYSSLEKKGLVNQI--- 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 LDRESIGLKINELLVVEYYSR 196 >gi|33413175|emb|CAD86723.1| ribosomal protein small subunit 4 [Ptychomitrium crassinervium] Length = 192 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R VNI Sbjct: 57 LNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K V++ +++ VP +++ N +I L Sbjct: 117 PSYRCKPQDFITLKARQKFQDMVIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHG 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|37992541|gb|AAR06449.1| small ribosomal protein 4 [Hemiragis aurea] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---IAQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQLKSEAIISKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035992|gb|AAY62922.1| small ribosomal protein subunit 4 [Duthiella wallichii] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T + E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLPNYVRIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|11228619|gb|AAG33095.1| small ribosomal protein 4 [Campylopus areodictyon] Length = 191 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFIXIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLNINELLVVEYYSR 189 >gi|37992675|gb|AAR06516.1| small ribosomal protein 4 [Scleropodium obtusifolium] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|29422385|gb|AAO84588.1| small ribosomal protein 4 [Aulacomnium palustre] Length = 190 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + L ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|67036006|gb|AAY62929.1| small ribosomal protein subunit 4 [Habrodon perpusillus] Length = 195 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYISLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLXINELLVVEYYSR 193 >gi|67036048|gb|AAY62950.1| small ribosomal protein subunit 4 [Eurhynchium hians] Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVTQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|29422375|gb|AAO84583.1| small ribosomal protein 4 [Quathlamba debilicostata] Length = 197 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K P ++ K S + ++L KQK++ +YG + Sbjct: 1 GXRVRIIRRLGXLPGLTNKIPQLK---SLSINQSTSNKKISQYRIRLEEKQKLRFHYG-M 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D I +K + + + + ++ +P ++S N +I Sbjct: 117 CIVDIPSYRCKPHDFITIKDRQRSQTIISKNIDFYQKYKIPNHLSYNSLENKGLVNQI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|50235338|gb|AAT70702.1| Rps4 [Kindbergia praelonga] Length = 195 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|63101015|gb|AAY33132.1| small ribosomal protein 4 [Platygyriella aurea] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLK---FSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|42794675|gb|AAS45734.1| Rps4 [Satyria allenii] Length = 211 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRRT--QSRFVKXXXXXYHIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLFQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|21914170|gb|AAM81307.1| ribosomal protein subunit 4 [Ptychostomum pallens] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 NIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|288574373|ref|ZP_06392730.1| ribosomal protein S4 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570114|gb|EFC91671.1| ribosomal protein S4 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 205 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 7/205 (3%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 ++ + K K+ RR G N++G K RR +K S +G QL KQK++ Y Sbjct: 7 RKTAPKGKMVRRFGVNVFGNTKYDRLLAKKSGANKKNRRPAKQSIYGQQLLEKQKIRFAY 66 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G +SEK+ R+ + +A G HN++ LESRLD +VYR T ARQ V H H Sbjct: 67 G-VSEKQLRAAYAKAKNQGGVAGHNMLILLESRLDNVVYRLGLCSTRPQARQLVRHGHFT 125 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 +N R V+I S K GDVI V +KS+++ + E S++A P ++S+N M R Sbjct: 126 LNDRKVDIPSALVKPGDVIAVAEKSREMKVLRENSEVASAVSKPGWLSLN--GMSGKVER 183 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 +P + P I +VVE+YSR Sbjct: 184 LPERQE---IPTIADEQIVVEYYSR 205 >gi|63191863|gb|AAY34891.1| small ribosomal protein subunit 4 [Pleurochaete squarrosa] Length = 192 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|37992441|gb|AAR06399.1| small ribosomal protein 4 [Callicostella pallida] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIGLKINELLVVEYYSR 192 >gi|11228664|gb|AAG33117.1| small ribosomal protein 4 [Ptychomitrium gardneri] Length = 191 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A V++ ++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKARQKSQAMVIKNVDFSQNYKVPNHLTFNSLEKKGLVNQI---LDHGS 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|325108696|ref|YP_004269764.1| 30S ribosomal protein S4P [Planctomyces brasiliensis DSM 5305] gi|324968964|gb|ADY59742.1| SSU ribosomal protein S4P [Planctomyces brasiliensis DSM 5305] Length = 202 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 104/208 (50%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + K +I+RR+G ++ R PG+H +R+K +G L KQK+ Sbjct: 1 MGRYTGPKARINRRLGSPVFESAGALRASEKRDSPPGMHQRRKKPTI--YGAALTEKQKI 58 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YYG E++ R F EA R +G+T NL+ E RLD +V RA F T ARQ + H Sbjct: 59 KYYYGF-RERQLRKYFNEARRLKGNTGQNLLVLCERRLDNVVRRAGFAQTRPQARQAIVH 117 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H +NGR+VN S + + GDVI V+ + A E A+ E++SV+ + Sbjct: 118 SHFQLNGRTVNKPSIQVRAGDVITVRNRPNLHAIYKEQVGRADTAACEFVSVDDSALKIV 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP+ DV PV + VV F SR Sbjct: 178 VSAIPT-FADVSLPVDVN--QVVAFLSR 202 >gi|22854713|gb|AAN09776.1| small ribosomal protein 4 [Holomitrium cylindraceum] Length = 191 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNIYFSQKSKIPNHLTFSSLEKRGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67036056|gb|AAY62954.1| small ribosomal protein subunit 4 [Dichelyma falcatum] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQTTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYKKYKIPNHLTYISLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63101055|gb|AAY33152.1| small ribosomal protein 4 [Pterobryopsis stolonacea] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K K K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYQCKPQDFITIKNKRKSETIISKNIEFDQKYKIPNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|22854729|gb|AAN09784.1| small ribosomal protein 4 [Orthodicranum flagellare] Length = 189 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A +++ +++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|67035748|gb|AAY62805.1| small ribosomal protein subunit 4 [Pentastichella pentasticha] Length = 193 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 KIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+ Sbjct: 57 LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 IPSYRCKPQDFITIKNRQKSQDIITKNIDFYQKYKIPNHLTYNSLEKNGFVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ELIGLKINELLVVEYYSR 191 >gi|37992483|gb|AAR06420.1| small ribosomal protein 4 [Cyclodictyon roridum] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIDLKINELLVVEYYSR 192 >gi|74273237|gb|ABA01318.1| ribosomal protein S4 [Deidamia sp. LBF-2005] Length = 186 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP N ++ Q R K S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLPSKSPKNRSAFQ----NQSRSGKKSQYSIRLQEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVNGR V+I +YRC Sbjct: 56 IAAKAKGPTGQVLLQLLEMRLDNMLFRLGMASTIPQARQLVNHRHILVNGRIVDIPNYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I + Sbjct: 116 KPRDLITVKDEQKLKDLIRNSLASFPQDKLPKHLTLDPLQYKGLVNQIIDRK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|149178472|ref|ZP_01857061.1| 30S ribosomal protein S4 [Planctomyces maris DSM 8797] gi|148842685|gb|EDL57059.1| 30S ribosomal protein S4 [Planctomyces maris DSM 8797] Length = 201 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 9/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + K +++RR+G ++ ++ R+ PG+ +RRK S FGL L KQK+ Sbjct: 1 MGRYTGPKGRVNRRLGALVFEDAGATRALDQRNLPPGMSQRRRK--SSNFGLALIEKQKI 58 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YYG + E++ R F +A R +G+T L+ E RLD ++ RA F T ARQ + H Sbjct: 59 KFYYG-LRERQLRRYFDKARRIKGNTGEALLILCERRLDNVICRAGFAQTRPQARQGIVH 117 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H +NGR+VN S K GDVI V+ + E + R ++++ + AT Sbjct: 118 SHFQLNGRTVNKPSIWVKPGDVITVRNRPNLKKLYAELIESG-RPGCAWLTLEKKELSAT 176 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P+ ++DV PV + VV SR Sbjct: 177 VVTAPT-MEDVSLPVDV--GQVVALISR 201 >gi|39546759|gb|AAR28106.1| small ribosomal protein 4 [Pellia epiphylla] gi|46811036|gb|AAT01836.1| small ribosomal protein 4 [Pellia epiphylla] Length = 195 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 8/201 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K + S G +K S + ++L KQK++ +YG + Sbjct: 1 GPRTKIIRRLGTLPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILIND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 +V+I SY C+ DVI V + K+ + + VP +++ + + + Sbjct: 117 DTVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---ECIDLKINELLVVEYYSR 193 >gi|67035994|gb|AAY62923.1| small ribosomal protein subunit 4 [Chrysocladium flammeum] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN + Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMI 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|42794691|gb|AAS45742.1| Rps4 [Satyria sp. EAP-2003] Length = 211 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K S + ++L+ KQK + Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPKXXNSRRTQSRFXKKK--KSQYHIRLQEKQKXRX 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ L L + Q + VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRQRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|47606934|gb|AAT36387.1| ribosomal protein subunit 4 [Pyrrhobryum novae-caledoniae] Length = 195 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P T S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLTSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 IDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESISLKINELLVVEYYSR 193 >gi|37992433|gb|AAR06395.1| small ribosomal protein 4 [Brymela websteri] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G L G + +S K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGV-LPGLTNKILELKSSSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A V + + ++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKNQQKSEAIVNKNIEFYQKTKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|7576759|gb|AAF63976.1| small ribosomal protein 4 [Dendroligotrichum dendroides] Length = 190 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTIKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|46486538|gb|AAS98705.1| ribosomal protein subunit 4 [Mesochaete taxiforme] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN + V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDQIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K A + + ++ +P ++ + +I L Sbjct: 117 DIPSYQCKPQDFITIKDRQKSQAIISKNIYFYQKYKIPNHLIYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|3098256|gb|AAC15576.1| small ribosomal protein 4 [Syntrichia ruralis] Length = 196 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 2 RVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 58 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 118 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---L 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 DQESIGLKINELLVVEYYSR 194 >gi|67035929|gb|AAY62891.1| small ribosomal protein subunit 4 [Entodon hampeanus] Length = 194 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|20531101|gb|AAM27371.1| ribosomal protein 4 [Dicnemon seriatum] Length = 191 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A +++ +++ VP +++ + +I L Sbjct: 117 SYRCKPQDFITIKDRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|28194675|gb|AAO33599.1|AF480954_1 ribosomal protein S4 [Desmatodon latifolius] Length = 196 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SYRCK D I + + K + + ++ +P +++ N +I Sbjct: 117 IVNIPSYRCKPQDFITINNRKKSQVMINKNIDFYQKSKIPNHLTFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQELIGLKINELLVVEYYSR 194 >gi|42556404|gb|AAS19797.1| small ribosomal protein 4 [Cephalozia bicuspidata] Length = 191 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G + K+ + +Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRPGISPGLTSKTLKSKSNY---IDRSTSNKKVSQYRVRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R PTI ARQ VNH H+ +N ++I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISMNNNIIDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K + + + + L ++ +P ++S + + + ++ + Sbjct: 117 SYNCQPGDIITIRNKPESRSMISKNINLFQKLKMPSHLSFDLTELQGSVNQMVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|37992623|gb|AAR06490.1| small ribosomal protein 4 [Papillaria imponderosa] Length = 192 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|37992703|gb|AAR06530.1| small ribosomal protein 4 [Thamniopsis pendula] Length = 194 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|160894729|ref|ZP_02075504.1| hypothetical protein CLOL250_02280 [Clostridium sp. L2-50] gi|156863663|gb|EDO57094.1| hypothetical protein CLOL250_02280 [Clostridium sp. L2-50] Length = 197 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + R R K S +GLQLR KQK K Sbjct: 1 MAVDRTPVLKRCRSLGMEPMYLGIDKKSNRKST------RANRKVSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+++ +A++ +G T NL++ LE RLD +++R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNLYAKAEQQKGLTGPNLMTLLELRLDNVIFRLGFARTRREARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNG+SVNI SY+ K GD IE+++KSK L + E VP +++ + +N+ Sbjct: 114 VLVNGKSVNIPSYQVKAGDKIEIREKSKSLQRYKDIIAATEGHLVPGWLTADRENLCGEV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V P+ + V + L+VE YS+ Sbjct: 174 VEKPNREQ---IDVPVNETLIVELYSK 197 >gi|37992487|gb|AAR06422.1| small ribosomal protein 4 [Daltonia longifolia] Length = 194 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKVIRRLGVLPGLTNKVLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + +++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEVLINKNIEFSQKSKIPNHLTYNSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CESIGLKINELLVVEYYSR 192 >gi|33413187|emb|CAD86730.1| ribosomal protein small subunit 4 [Dicranella palustris] Length = 187 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTSKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A +++ +++ VP +++ N +I L + Sbjct: 117 KPQDFITIKDRQKSQAMIIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI---LDQESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|7576571|gb|AAF63898.1| ribosomal protein system 4 [Hypnum lindbergii] Length = 190 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQQKSKTIITKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|3098260|gb|AAC15578.1| small ribosomal protein 4 [Plagiopus oederi] Length = 197 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I R+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 3 RVRIISRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 58 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R Sbjct: 59 RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRM 118 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 119 VDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---L 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 DRESIGLKINELLVVEYYSR 195 >gi|146261585|gb|ABQ15102.1| ribosomal protein S4 [Ribes americanum] Length = 187 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGXLPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYR Sbjct: 56 RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I K K A + + ++P+Y++++ +I + + Sbjct: 116 CKPRDIITAKDDQKSRALIQNYLDSSPHEELPKYLTLHPLQYKGLVNQIIDT---EWVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|37992573|gb|AAR06465.1| small ribosomal protein 4 [Lepidopilum polytrichoides] Length = 194 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P Y++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKMKIPNYLTYNFVEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|32892116|gb|AAP88997.1| ribosomal protein S4 [Mitostemma brevifilis] gi|74273239|gb|ABA01319.1| ribosomal protein S4 [Dilkea johannesii] Length = 186 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ G Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPI----AGSAFQNQSRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 116 KPRDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|67035984|gb|AAY62918.1| small ribosomal protein subunit 4 [Ptilium crista-castrensis] Length = 194 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L LE RLD +++R PTI ARQ VNH H+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|302669990|ref|YP_003829950.1| ribosomal protein S4 RpsD [Butyrivibrio proteoclasticus B316] gi|302394463|gb|ADL33368.1| ribosomal protein S4 RpsD [Butyrivibrio proteoclasticus B316] Length = 208 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 110/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R + + + R+ R K S +GLQLR KQK K Sbjct: 12 MAVNRVPVLKRCRSLDLDPTFLGYDKKSKRTSA------RAGKKMSEYGLQLREKQKAKF 65 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + ADR +G T NL++ LESRLD +V+R F T ARQ V H+ Sbjct: 66 IYGVL-EKPFRNYYDRADRMKGQTGANLMTILESRLDNVVFRMGFARTRREARQVVLHKF 124 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 VLVNG+ +N+ SY K GD IE+K+ +K + + +++ A R VPE+I VN DN+ T Sbjct: 125 VLVNGKQINVPSYLVKAGDTIEIKEAAKNIQRFKDITEITAGRLVPEWIDVNKDNLQGTV 184 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS V + L+VE YS+ Sbjct: 185 KELPSR---EVIDVPVDEMLIVELYSK 208 >gi|78102697|gb|ABB21562.1| small ribosomal protein 4 [Plagiochila rutilans var. moritziana] Length = 189 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLNINELLVVE 189 >gi|78102699|gb|ABB21563.1| small ribosomal protein 4 [Plagiochila nobilis] Length = 189 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINDDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ G++I ++ + K +++ + ++ VP +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGEIITIRNRQKSQSAITKNINSFQKLKVPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + ++ LVVE Sbjct: 176 --EWINLKIKELLVVE 189 >gi|21914162|gb|AAM81303.1| ribosomal protein subunit 4 [Plagiobryum cyclophyllum] Length = 195 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P + ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKIPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 VNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|63191793|gb|AAY34856.1| small ribosomal protein subunit 4 [Takakia ceratophylla] Length = 188 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + Y ++ K S + ++L KQK++ ++G I+E++ Sbjct: 1 LGALPGLTNKTPQSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHHG-ITERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T + LE RLD +++R PTI ARQ VNHRH+LVN R+VNI S+R Sbjct: 57 RIARRAKGSTGQVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRTVNIPSFR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + +++ +P ++++N +I + Sbjct: 117 CKPQDFITIKDRQKSQAIITKNMDCSQKSKIPNHLTLNSSQKRGLVNQIIDR---ESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|67035980|gb|AAY62916.1| small ribosomal protein subunit 4 [Hylocomium splendens] Length = 194 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035957|gb|AAY62905.1| small ribosomal protein subunit 4 [Circulifolium microdendron] Length = 192 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|37992719|gb|AAR06538.1| small ribosomal protein 4 [Weymouthia mollis] Length = 190 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|37992445|gb|AAR06401.1| small ribosomal protein 4 [Calyptrochaeta japonica] Length = 194 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I K + + + + + + +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITTKDQRESEDIINKNIEFYQNYKIPNHLNYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|240145850|ref|ZP_04744451.1| ribosomal protein S4 [Roseburia intestinalis L1-82] gi|257201998|gb|EEV00283.1| ribosomal protein S4 [Roseburia intestinalis L1-82] gi|291535455|emb|CBL08567.1| SSU ribosomal protein S4P [Roseburia intestinalis M50/1] gi|291537904|emb|CBL11015.1| SSU ribosomal protein S4P [Roseburia intestinalis XB6B4] Length = 197 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + R +R K S +GLQLR KQK K Sbjct: 1 MAVNKVPVLKRCRSLGLEPSYLGYDKKSNREL------KRANKKVSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK F + +++AD+ +G T NL++ LESRLD +V+R F T ARQ V+H+ Sbjct: 55 IYGVL-EKPFHNYYEKADQMKGMTGTNLMTMLESRLDNVVFRMGFARTRKEARQIVDHKF 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 +LVNG+ VNI SY K GDVIE+K+K+K L + + + R VPE++ V+ + + T Sbjct: 114 ILVNGKQVNIPSYLVKAGDVIEIKEKNKGLQRMKDIVEVTGGRLVPEWLDVDAEKLQGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS + V + L+VE YS+ Sbjct: 174 KELPSREQ---IDVPVDEMLIVELYSK 197 >gi|222084196|ref|YP_002519790.1| ribosomal protein S4 [Gnetum parvifolium] gi|172048621|sp|A6BM54|RR4_GNEPA RecName: Full=30S ribosomal protein S4, chloroplastic gi|149941464|dbj|BAF64899.1| ribosomal protein S4 [Gnetum parvifolium] gi|220983533|dbj|BAH11301.1| ribosomal protein S4 [Gnetum parvifolium] Length = 204 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 10/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P + R K S L+ KQK++ Sbjct: 1 MSRYLGPRFKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 ++G ++E++ R + + +G T L+ LE RLD I+YR TI ARQ VNHRH Sbjct: 58 HFG-LTERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVA 177 +LVN VNI SY+CK DVI +K K + ++ E +P +++++ Sbjct: 117 ILVNDHVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKG 176 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + ++ LV+E+YSR Sbjct: 177 IVNKIIDRKD---IQLNIKEMLVIEYYSR 202 >gi|32892122|gb|AAP89000.1| ribosomal protein S4 [Passiflora lancetillensis] Length = 183 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P+ ++ R K S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRPIVGSAF-------SRSGKKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + R+ +P++++++ +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPREKLPKHLTLDPFQYKGLVNQIIDSK---WVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|48527363|gb|AAT45814.1| small ribosomal protein 4 [Plagiochila chonotica] Length = 179 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 5/183 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRI 182 ++ Sbjct: 177 NQM 179 >gi|328488154|gb|AEB19890.1| small ribosomal protein 4 [Pachyschistochila berggrenii] Length = 191 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLSSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNNKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|22854693|gb|AAN09766.1| small ribosomal protein 4 [Dicnemon semicryptum] Length = 191 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + A +++ +++ VP +++ + +I L Sbjct: 117 SYRCKPQDFITIKNRQESQAMIIKNLDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|74273227|gb|ABA01313.1| ribosomal protein S4 [Adenia isaloensis] Length = 185 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP N ++ + + K S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKNRSAFQ-----NQSRCKKSQYSIRLQEKQKLRFHYG-LTERQLLKYVR 54 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVNGR V+I +YRC Sbjct: 55 IAAKAKGPTGQVLLQLLEMRLDNMLFRLGMASTIPQARQLVNHRHILVNGRIVDIPNYRC 114 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I + Sbjct: 115 KPRDLITVKDEQKSKDLIRNSLASFPQEKLPKHLTLDPLQYKGLVNQIIDRK---WVGLK 171 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 172 INELLVVEYYSR 183 >gi|238064635|ref|ZP_04609344.1| RNA-binding S4 domain-containing protein [Micromonospora sp. ATCC 39149] gi|237886446|gb|EEP75274.1| RNA-binding S4 domain-containing protein [Micromonospora sp. ATCC 39149] Length = 202 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 9/203 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K RR+G L + + R + PG HG+ R Y ++L KQ++K Y + Sbjct: 6 PKAKRSRRLGIALTPKCVRYLERRPFPPGDHGRARTKDSDY-KVRLLEKQRLKAQYD-LR 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R F A R G T L+ LE+RLD +V RA F TI+ ARQ V HRH+ VNGR Sbjct: 64 EGQLRRAFDRAVRRPGKTGEELVVDLETRLDALVLRAGFARTIYQARQLVTHRHLTVNGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIP 183 V+ S R + GD I V ++S+ A L A+ A +R P Y+ V+ +VA R P Sbjct: 124 RVDRPSARLRPGDEIAVAERSRGRAPFLLAAGGAHAPQRPAP-YLDVDLAGLVARLTRPP 182 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 ++ PVI LVVE YSR Sbjct: 183 RRVE---VPVICDEQLVVEHYSR 202 >gi|121761853|gb|ABM65012.1| ribosomal protein S4 [Plagiomnium maximoviczii] Length = 192 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE+R D I++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 PSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD--- 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 FIDLKINELLVVEYYSR 190 >gi|37992645|gb|AAR06501.1| small ribosomal protein 4 [Pilotrichum andersonii] Length = 194 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTILGARQLVNHKHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSQAIISKNIEFYQKFKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|28194671|gb|AAO33597.1|AF480952_1 ribosomal protein S4 [Barbula unguiculata] Length = 196 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGTLPGLTNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I + + K + + ++ +P ++ N +I Sbjct: 117 IVDIPSYRCKPQDLITINDRQKSQVMITKNVDFFQKSKIPNHLIFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|328541144|gb|AEB21796.1| ribosomal protein S4 [Sprucella succida] Length = 200 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+G + K+ SY K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKVIRRLGASPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A +++G T L+ LE RLD + R TI ARQ VNHRH+ + Sbjct: 58 -LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISI 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N ++I SY C+ GD+I ++ K K + + + L + +P +++ + + + + Sbjct: 117 NNNIIDIPSYNCEPGDIITIRNKQKSRSIITKNVNLFQNLKMPNHLTFDSTKLCGSINQT 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 INR---EWINLKINELLVVEYYSR 197 >gi|302868886|ref|YP_003837523.1| 30S ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029] gi|302571745|gb|ADL47947.1| ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029] Length = 202 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 7/202 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K ++ R +G L + R Y PG+HG+ R++ Y ++L KQ+++ Y ++S Sbjct: 6 PKARLSRALGIPLTRKCVRYFERRPYPPGVHGRSRRTTSDYQ-VRLLEKQRLRHQY-NVS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R +F EA R G T L++ LE RLD +V RA +++ ARQ V H H+ V+GR Sbjct: 64 EAQLRRLFDEAARGAGKTGETLVALLERRLDAVVLRAGLARSVYQARQLVAHGHITVDGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP--EYISVNHDNMVATFVRIPS 184 V+ SYR + G V+ V+++S+ L A+ A D Y+S + AT VR P+ Sbjct: 124 KVDRPSYRLRPGQVVGVRERSRALPPFQLAAAGAHADAQPRPYLSAQPAELRATLVREPA 183 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + PV+ LVVEFYSR Sbjct: 184 RHE---VPVVCDEQLVVEFYSR 202 >gi|37548885|gb|AAO32711.1| ribosomal protein 4 [Polytrichum piliferum] Length = 192 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P Y ++ K S + ++L KQK++ +YG +E++ Sbjct: 1 IIRRLGXLPGLTNKTPQTKSXY---INQAVSNKKMSQYRIRLEEKQKLRFHYGX-TERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A R++G T L+ LE RLD I++R PTI ARQ VNH H+LVN R +NI Sbjct: 57 LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHXHILVNDRIINI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + A + ++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIARNIDXSQXXKIPNHLTFNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|297588221|ref|ZP_06946865.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516] gi|297574910|gb|EFH93630.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516] Length = 198 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 12/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K RR+G N+ G PK+ G R K + +G+QL KQ+++ Sbjct: 1 MARMMGPRFKQSRRLGLNVCGHPKANKRM-----GKGLGRNDKKLTEYGMQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRG--DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YYG ++EK+ F++A ++ T ++ LE+RLD +V RA F +I ARQ V+H Sbjct: 56 YYG-VNEKQMHKYFEKALNNKEGLTTGDVMVRQLETRLDNLVLRASFASSIRQARQMVSH 114 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 + VNG+ V+I SY+ EG VIE+K+KS+ E + YI +N T Sbjct: 115 GLIRVNGKKVDIPSYQVAEGSVIELKEKSRSNELFKENYETNFAQSLPYID-KEENFKVT 173 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + +L+VE YSR Sbjct: 174 LTRLPERQE---IPIEITDSLIVELYSR 198 >gi|42794641|gb|AAS45718.1| Rps4 [Ceratostema reginaldii] Length = 211 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++ + KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRPQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIXGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|63191783|gb|AAY34851.1| small ribosomal protein subunit 4 [Atrichum undulatum] Length = 190 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQEFQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLEINELLVVEYYSR 188 >gi|17025843|gb|AAL32087.1| ribosomal protein 4 [Mitthyridium sp. Wall 3673] Length = 195 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + ++ K S + ++L KQK++ +YG ++E+ Sbjct: 2 VKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 58 QLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNMV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 118 NIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNFVEKKGLVNQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 QESIGLKINELLVVEYYSR 193 >gi|14276328|gb|AAK58202.1| small ribosomal protein 4 [Schistostega pennata] Length = 190 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKIPQLRSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ + + VP +++ N +I L Sbjct: 117 YRCKPQDFITIKDRQKSHAMIMKNVDFSRKAKVPNHLTFNSLEKNGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|197131478|gb|ACH47257.1| ribosomal protein S4 [Erodium chrysanthum] Length = 198 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K +R+ NL G R P +K + + +L+ KQK++ Sbjct: 1 MSRYRGPRFKKVQRLETNLPGFT----TKRPIIP-----LKKKRERIYITRLKEKQKLRL 51 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 52 HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 110 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDNMVA 177 +LVNGR V+I SYRCK D++ ++K+K + +S + + +P +++ + Sbjct: 111 ILVNGRIVDIPSYRCKPRDILTGREKAKSRNLMQNYLDSSSSSHKRLPNHLTTHPLQYKG 170 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 171 LVHQIIDRR---CVGLKINEFLVVEYYSR 196 >gi|297198341|ref|ZP_06915738.1| ribosomal protein S4 [Streptomyces sviceus ATCC 29083] gi|197714395|gb|EDY58429.1| ribosomal protein S4 [Streptomyces sviceus ATCC 29083] Length = 204 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQPRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A +++G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-VSERQLVRAYERAAKTQGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG+ V+ S+R + DV+ V+++S++ A + E + P Y+ VN + Sbjct: 119 IEVNGQKVDKPSFRVRPDDVVMVRERSREKTLFSIAREGGFAPEGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204 >gi|67035600|gb|AAY62731.1| small ribosomal protein subunit 4 [Micromitrium austinii] Length = 188 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + V++ +++ VP +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992489|gb|AAR06423.1| small ribosomal protein 4 [Dendrocyathophorum decolyi] Length = 194 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ +NH+H+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHKHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + +L ++ +P ++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIINKNIELYQKYKIPNHLIYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|18920767|gb|AAL82428.1| ribosomal protein system 4 [Plagiothecium curvifolium] Length = 194 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 CEIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|157887698|emb|CAM33371.1| ribosomal protein S4 [Triquetrella papillata] Length = 196 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K P T S R+ S + ++L KQK++ +YG I+ Sbjct: 1 PRVKIIRRLGTLPGLSNKIPHLTSSSTNQSTSNRK---ISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + +++ +P +++ N +I Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LDQESIGLKINELLVVEYYSR 194 >gi|37992731|gb|AAR06544.1| small ribosomal protein 4 [Zelometeorium patulum] Length = 195 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 VDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|293633969|gb|ADE60364.1| ribosomal protein subunit 4 [Atrichum androgynum] Length = 190 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + A + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQEFQAIITRNIDFSQTYKIPNHLTFNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLEINELLVVEYYSR 188 >gi|37992613|gb|AAR06485.1| small ribosomal protein 4 [Orthostichidium involutifolium] Length = 192 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNSCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|11228629|gb|AAG33100.1| small ribosomal protein 4 [Dicranodontium denudatum] Length = 191 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K V + + +++ VP +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI---LNKES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|323483273|ref|ZP_08088663.1| hypothetical protein HMPREF9474_00412 [Clostridium symbiosum WAL-14163] gi|323691228|ref|ZP_08105504.1| ribosomal protein S4 [Clostridium symbiosum WAL-14673] gi|323403371|gb|EGA95679.1| hypothetical protein HMPREF9474_00412 [Clostridium symbiosum WAL-14163] gi|323504747|gb|EGB20533.1| ribosomal protein S4 [Clostridium symbiosum WAL-14673] Length = 197 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R + + + R +R K S +GLQLR KQK K Sbjct: 1 MAVDRVPVLKRCRSLDLDPIYLGIDKKSKREL------KRANRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A + G NL+ LE RLD +++R F T RQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKASKMSGQVGTNLMILLECRLDNVLFRMGFGRTRKETRQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SYR K GD IE+K+K K + A R VP ++ + +N+ Sbjct: 114 VLVNGKPVNIPSYRVKAGDTIEIKEKYKSSQRYKNILEVTAGRMVPAWLEADMENLKGVV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KELPTRDE---IDVPVNEVLIVELYSK 197 >gi|29422407|gb|AAO84599.1| small ribosomal protein 4 [Philonotis falcata] Length = 195 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGAXXGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD +++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKXKGSTGEVLLQLLEMRLDNVIFRLGMAXTIPGARQLVNHRHILVNDRX 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|21914166|gb|AAM81305.1| ribosomal protein subunit 4 [Plagiobryum meesioides] Length = 194 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTAQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 NIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|46486546|gb|AAS98709.1| ribosomal protein subunit 4 [Mniodendron comosum] Length = 195 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ ++ ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALAGLTNKTAQLKSNF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ ++ +I L Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|29833389|ref|NP_828023.1| 30S ribosomal protein S4 [Streptomyces avermitilis MA-4680] gi|41017832|sp|Q827S7|RS4_STRAW RecName: Full=30S ribosomal protein S4 gi|29610512|dbj|BAC74558.1| putative ribosomal protein S4 [Streptomyces avermitilis MA-4680] Length = 204 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +SE++ ++ A +++G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-VSERQLVRAYERAAKTQGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG+ V+ S+R K DV+ V+++S+Q A + + + P Y+ VN + Sbjct: 119 IEVNGQKVDKPSFRVKPDDVVMVRERSRQKPLFEVAREGGFAPDGETPRYLQVNLRALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204 >gi|67035871|gb|AAY62862.1| small ribosomal protein subunit 4 [Rhacopilopsis trinitensis] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPRLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|66866231|gb|AAY57785.1| small ribosomal protein 4 [Hymenodontopsis bifaria] Length = 204 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 13/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASV------LEASQLAERDVPEYISVNHDNMVA 177 N R V+I SYRCK D I +K + K A + + +P +++ + Sbjct: 117 NDRIVDIPSYRCKPQDFITMKDRQKYQAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKKG 176 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 177 LVTQI---LDRESIGLKINELLVVEYYSR 202 >gi|323141381|ref|ZP_08076272.1| ribosomal protein S4 [Phascolarctobacterium sp. YIT 12067] gi|322414130|gb|EFY04958.1| ribosomal protein S4 [Phascolarctobacterium sp. YIT 12067] Length = 197 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G S + R +R+ K S +G+QL KQK K Sbjct: 1 MAIDRTPVLKRCRSLGLAPAFMGISKESKRQV------RRQNRKKSEYGIQLTEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR + +A + G T NL+ LE R+D +V+R T ARQ V H H Sbjct: 55 IYGVL-EKQFRGYYDKAKKMEGITGENLLILLERRIDNVVFRLGLANTRRQARQIVRHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 + VNG+ ++I S + GDV+ V + S+ + LA + VP ++ ++ N+ Sbjct: 114 IAVNGKRLDIPSALVRVGDVVTVMENSRAKEYFKGMDETLATKAVPAWLVLDAANVSGKV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + V ++ + +VE YS+ Sbjct: 174 DRFPTREE---IDVPIEEHFIVELYSK 197 >gi|7576581|gb|AAF63903.1| ribosomal protein system 4 [Haplocladium virginianum] Length = 189 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + +++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFSQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|256370802|ref|YP_003108627.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri SMDSEM] gi|256009594|gb|ACU52954.1| 30S ribosomal subunit protein S4 [Candidatus Sulcia muelleri SMDSEM] Length = 223 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 25/225 (11%) Query: 1 MSKRESSKHKIDRR--IGENLWGRPKSPVNTRSYGPGLHGQRRKSK-------------- 44 M+K K+KI R+ +GE+++ + K+ + G + R K Sbjct: 1 MAKYIGPKNKIARKFELGESIYLKEKNNFENKKTFDGQYVNPRSGKNRKIIKKLNKKLNK 60 Query: 45 -----PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 S++ +QL KQK+K YG I EK+FR +F++A + +G L+ ESRLD I Sbjct: 61 KLNKKKSFYFIQLLEKQKVKYTYG-ILEKQFRKMFEKASKKKGRKGEILLQLCESRLDNI 119 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 VYR K T ARQ V+HRH+ VNG+ VNI SY K GD I + +K K+ ++L + Sbjct: 120 VYRLKLSHTRPEARQLVSHRHITVNGKIVNIPSYNLKPGDKISLIEKYKKQKAILLEKKR 179 Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 V ++S +++N + IP + P ++ NL+VE Y Sbjct: 180 LVGKVTTWLSWDNENFIGILKSIPRREQ---IPEMINENLIVELY 221 >gi|3098258|gb|AAC15577.1| small ribosomal protein 4 [Pyrrhobryum spiniforme] gi|46486584|gb|AAS98728.1| ribosomal protein subunit 4 [Pyrrhobryum spiniforme] gi|47606938|gb|AAT36389.1| ribosomal protein subunit 4 [Pyrrhobryum pungens] Length = 195 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P T S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLTSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESISLKINELLVVEYYSR 193 >gi|49182712|gb|AAT57818.1| small ribosomal protein [Haplomitrium blumei] Length = 198 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G L G + +RS +K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGT-LPGLTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD +++R TI ARQ VNHRH+++N ++ Sbjct: 57 RQLLRYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMINDKT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSK----QLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183 V+ Y C+ D+I K +K + + + +P ++ ++ V +I Sbjct: 117 VDAPGYNCEPRDIITTKITTKNPMESRLGMAKGMDSIQYKIPNHLFLDSSKGVGLVNQII 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 DR---EWISLKINELLVVEYYSR 196 >gi|63191871|gb|AAY34895.1| small ribosomal protein subunit 4 [Gyroweisia tenuis] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P ++S N +I L Sbjct: 117 NIPSYRCKPQDFISIKNRQKSQVMITKNIDFSQKSKIPNHLSFNSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|328488178|gb|AEB19902.1| small ribosomal protein 4 [Schistochila pseudociliata] Length = 191 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNKKKSQSIITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|37683548|gb|AAQ98825.1| small ribosomal protein 4 [Pogonatum macrophyllum] Length = 190 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQESQVIIAKIIDFSQKYKIPNHLTFNSFEKKGLVNKI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|37548853|gb|AAO32695.1| ribosomal protein 4 [Pogonatum campylocarpon] Length = 190 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGVLPGLSGKTLRQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ GD I V+ + K + + + L +P +++ + + + + Sbjct: 117 YSCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFVNQTINR---ELI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NLKINELLVVEYYSR 188 >gi|12330472|gb|AAG52773.1| ribosomal protein 4 [Muscoflorschuetzia pilmaiquen] Length = 187 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 GALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 + D I +K + K +++ +++ +P +++ + +I L + Sbjct: 117 QPQDFITIKDRQKSQGIIVKNMDFSQKYKIPNHLTFDSLEKKGVVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|50235360|gb|AAT70713.1| Rps4 [Eurhynchiastrum pulchellum] Length = 195 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVTQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + +LVVE+YSR Sbjct: 174 DRESIGLKINESLVVEYYSR 193 >gi|12642220|gb|AAK00192.1| rps4 [Encalypta ciliata] gi|67035736|gb|AAY62799.1| small ribosomal protein subunit 4 [Encalypta ciliata] Length = 189 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGILPGLTNKTPQLKSSS---INXSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PT+ ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNNCIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A +++ +++ VP ++S + +I L Sbjct: 117 RCKPQDFISIKDRQKSQAIIIKNLDFSQKSKVPNHLSFDSLQKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|118626093|emb|CAL41755.1| small ribosomal protein 4 [Scapania compacta] Length = 191 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLXSKTLKSXSSY---IDRSXSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ VN +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHISVNNDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I V+ K K + + + L ++ +P +++ + + + ++ Sbjct: 117 SYHCEPGDIITVRNKQKSQSIITKNLNLFQKLKIPSHLTFDSTQLQGSVN---ETVNREW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|37992647|gb|AAR06502.1| small ribosomal protein 4 [Pilotrichidium antillarum] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGILPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CESIGLKINELLVVEYYSR 192 >gi|46486564|gb|AAS98718.1| ribosomal protein subunit 4 [Spiridens camusii] gi|63191765|gb|AAY34842.1| small ribosomal protein subunit 4 [Spiridens reinwardtii] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|290794180|gb|ADD64420.1| small ribosomal protein subunit 4 [Habrodon perpusillus] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYISLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLXINELLVVEYYSR 192 >gi|295101438|emb|CBK98983.1| SSU ribosomal protein S4P [Faecalibacterium prausnitzii L2-6] Length = 200 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K + +G + G K S G + K S + QL+ KQK+ Sbjct: 1 MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNSNG------NMRKKQSEYATQLKEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + EK+F + + +A+ G T NL+ +E RLD +V+R F T ARQ V+H Sbjct: 55 KFIYGVL-EKQFHNAYLKAEAMPGKTGENLLQLMERRLDNVVFRLGFAQTRRDARQLVSH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176 H VNG+ VNI SY K GDVIEV++ S+ A + + +P ++ + Sbjct: 114 AHFTVNGKKVNIPSYLIKAGDVIEVRESSRSSAKFAKLTGPEAPVVALPSWLDREAGTLK 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P D+ Y V +L+VE YS+ Sbjct: 174 GVVNKLPER-SDIDYEVA--EHLIVELYSK 200 >gi|63191885|gb|AAY34902.1| small ribosomal protein subunit 4 [Scopelophila cataractae] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G +P S + K S + ++L KQK++ +YG I+E++ Sbjct: 4 IRRLGTLPGLTNXTPQLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VBI Sbjct: 60 NYVRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNRLVBIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK D I +K + K A + + ++ +P +++ N +I L Sbjct: 120 SYCCKPQDFITIKDRQKSQALITKHIDFYQKSKIPNHLTFNSLEKKGLVNQI---LDQES 176 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 IGLKINELLVVEYYSR 192 >gi|11228627|gb|AAG33099.1| small ribosomal protein 4 [Dicranella heteromalla] Length = 191 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R VNI Sbjct: 57 NYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK D I +K + K A + + L+++ VP +++ N +I L Sbjct: 117 SYHCKPQDFITIKDREKSQAMITKNVDLSQKYKVPNHLTFNFLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67036118|gb|AAY62985.1| small ribosomal protein subunit 4 [Horridohypnum mexicanum] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNKRKSEIIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|11466958|ref|NP_054379.1| ribosomal protein S4 [Epifagus virginiana] gi|266975|sp|P30056|RR4_EPIVI RecName: Full=Plastid 30S ribosomal protein S4 gi|336927|gb|AAA65853.1| ribosomal protein S4 [Epifagus virginiana] Length = 202 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G K + + R K S + ++L KQK++ Sbjct: 1 MSRYRGPSLKKIRRLGALPGLTNKRSKAENDFI----KKLRSDKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++ R F A ++RG T L+ LE RLD I++R TI AARQ VNHRH Sbjct: 57 NYG-LRERQLRKYFSIAIKTRGSTGKVLMQLLEMRLDNIIFRLGMASTIPAARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER---DVPEYISVNHDNMVA 177 VLVNGR V+I SYRCK D+I + + + + + + P ++++ H Sbjct: 116 VLVNGRIVDIPSYRCKSRDIIMARDEQQSNTFINNCINYSTHNRMEAPNHLTLLHP-FKG 174 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +I S + LVVE+Y Sbjct: 175 LVNQIIDSK---WVGFKINELLVVEYY 198 >gi|7576651|gb|AAF63938.1| ribosomal protein system 4 [Breutelia scoparia] Length = 190 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNDRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|63191718|gb|AAY34819.1| small ribosomal protein subunit 4 [Epipterygium wrightii] Length = 192 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTISGARQLVNHRHILVNDRLVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + +P +++ N +I L Sbjct: 117 PSYRCKPQDFIIIKDRQKSQTMISKKIDFYQNYKIPNHLTYNFLTKKGLVKQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIDLKINELLVVEYYSR 190 >gi|169823881|ref|YP_001691492.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328] gi|302379778|ref|ZP_07268262.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3] gi|303234754|ref|ZP_07321380.1| ribosomal protein S4 [Finegoldia magna BVS033A4] gi|226699066|sp|B0RZT8|RS4_FINM2 RecName: Full=30S ribosomal protein S4 gi|167830686|dbj|BAG07602.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328] gi|302312366|gb|EFK94363.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3] gi|302494095|gb|EFL53875.1| ribosomal protein S4 [Finegoldia magna BVS033A4] Length = 198 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 12/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K RR+G N+ G PK+ G R K + +G+QL KQ+++ Sbjct: 1 MARMMGPRFKQSRRLGLNVCGHPKANKRM-----GKGLGRNDKKLTEYGMQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRG--DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YYG ++EK+ F++A ++ T ++ LE+RLD +V RA F +I ARQ V+H Sbjct: 56 YYG-VNEKQMHKYFEKALNNKEGLTTGDVMVRQLETRLDNLVLRASFASSIRQARQMVSH 114 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 + VNG+ V+I S++ EG VIE+K+KS+ E + YI +N T Sbjct: 115 GLIRVNGKKVDIPSFQVAEGSVIELKEKSRSNELFKENYETNFAQSLPYID-KEENFKVT 173 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + P+ + +L+VE YSR Sbjct: 174 LTRLPERQE---IPIEITDSLIVELYSR 198 >gi|78102717|gb|ABB21572.1| small ribosomal protein 4 [Plagiochila bicuspidata] Length = 189 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|37992545|gb|AAR06451.1| small ribosomal protein 4 [Hildebrandtiella cuspidans] Length = 194 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992629|gb|AAR06493.1| small ribosomal protein 4 [Papillaria nigrescens] Length = 192 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+ S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|23013991|ref|ZP_00053834.1| COG0522: Ribosomal protein S4 and related proteins [Magnetospirillum magnetotacticum MS-1] Length = 151 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 100/152 (65%), Positives = 116/152 (76%), Gaps = 2/152 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT-RSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 MSKR +K+KI+RR+G NLWGR KSP+N + PG HGQRRK KPS FG QL AKQK+K Sbjct: 1 MSKRIEAKYKINRRLGANLWGRSKSPLNRGKENPPGQHGQRRK-KPSDFGTQLMAKQKLK 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG+ISEK+FR ++ EA R RGDTS NLI LE RLD +VYR KF PT FAARQ VNH Sbjct: 60 GYYGNISEKQFRRLYDEAVRRRGDTSENLIGLLECRLDAVVYRLKFAPTPFAARQLVNHC 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 H+LVNG+ VNI SYR EGDV+ VK KSK +A Sbjct: 120 HILVNGKRVNIPSYRVNEGDVVSVKTKSKDMA 151 >gi|125662692|gb|ABN50296.1| small ribosomal protein 4 [Pseudolarix amabilis] Length = 195 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 9/201 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+ K P + + K S + ++ KQK++ +YG ++ Sbjct: 1 PRLKIIRRLKTLPGLTSKRPKHRNDSI----NRSSSRKISQYRIRPEEKQKLRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN Sbjct: 56 ERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDH 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 V+I SY CK DVI ++ + + A + + L +RD +P +++ + +I + Sbjct: 116 MVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFHSLQYKGLINQIIDT 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 K---WITLKINELLVVEYYSR 193 >gi|37992497|gb|AAR06427.1| small ribosomal protein 4 [Distichophyllum freycinetii] Length = 194 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGILPGLTNKVLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRVARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKSQQKSEVIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CESIGLKINELLVVEYYSR 192 >gi|28194723|gb|AAO33623.1|AF480978_1 ribosomal protein S4 [Pseudocrossidium porphyreoneurum] Length = 196 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + +I RR+G K P S + K S + ++L KQK++ +YG I+ Sbjct: 1 PRVRIIRRLGILPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 ERQLLNYVRVARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D I + + K + + +++ +P +++ N I Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINNI--- 173 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 174 LNQESIGLKINELLVVEYYSR 194 >gi|11228641|gb|AAG33106.1| small ribosomal protein 4 [Ditrichum pallidum] Length = 187 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S + K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A +++ +++ VP +++ N +I L + Sbjct: 117 KPQDFITIKDRQKSQAMIIKNIDFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|63101005|gb|AAY33127.1| small ribosomal protein 4 [Antitrichia curtipendula] Length = 191 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|12330466|gb|AAG52770.1| ribosomal protein 4 [Dendroligotrichum dendroides] gi|218157215|gb|ACK58424.1| ribosomal protein subunit 4 [Dendroligotrichum dendroides] gi|293634021|gb|ADE60390.1| ribosomal protein subunit 4 [Oligotrichum suzukii] gi|293634083|gb|ADE60421.1| ribosomal protein subunit 4 [Polytrichastrum appalachianum] gi|293634119|gb|ADE60439.1| ribosomal protein subunit 4 [Polytrichum commune] Length = 189 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|63191861|gb|AAY34890.1| small ribosomal protein subunit 4 [Oxystegus tenuirostris] Length = 192 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LIGLKINELLVVEYYSR 190 >gi|63101053|gb|AAY33151.1| small ribosomal protein 4 [Calyptothecium praelongum] Length = 194 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63078628|gb|AAY29400.1| ribosomal protein S4 [Tortella humilis] Length = 194 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLSNKIPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|83940935|gb|ABC48864.1| rps4 [Sinojackia sarcocarpa] Length = 193 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P+ G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 8 GALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 62 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRC Sbjct: 63 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRC 122 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I + + K A + + + ++P+++++ +I S + Sbjct: 123 KPRDIITARDEQKSRALIQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK---WIGLK 179 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 180 INELLVVEYYSR 191 >gi|37992729|gb|AAR06543.1| small ribosomal protein 4 [Zelometeorium patulum] Length = 195 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 VDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|293634105|gb|ADE60432.1| ribosomal protein subunit 4 [Polytrichastrum sphaerothecium] Length = 189 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDCIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIS 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|66866216|gb|AAY57780.1| small ribosomal protein 4 [Bryobrothera crenulata] Length = 208 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 13/208 (6%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K S +R S + ++L KQK++ +YG Sbjct: 6 RGPRVKIIRRLGVLPGLINKISQLKSSSNDQSTSNKR---ISQYRIRLEEKQKLRFHYG- 61 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A + +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 62 ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 121 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASV------LEASQLAERDVPEYISVNHDNMVAT 178 V+I SYRCK D I +K + K + + +P +++ + Sbjct: 122 DFIVDIPSYRCKPQDFITIKNQQKSEVIIXXXXXXKNMEFYQKSKIPNHLTYSSLEKKGL 181 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 182 VKQI---LDRESIGLKINELLVVEYYSR 206 >gi|78102727|gb|ABB21577.1| small ribosomal protein 4 [Plagiochila vincentina] Length = 189 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + +Y + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTFKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 QQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I + K K + V + ++ +P ++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWIDLKINELLVVE 189 >gi|293634081|gb|ADE60420.1| ribosomal protein subunit 4 [Polytrichastrum altaicum] gi|293634091|gb|ADE60425.1| ribosomal protein subunit 4 [Polytrichastrum norwegicum] Length = 189 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|78102713|gb|ABB21570.1| small ribosomal protein 4 [Plagiochila radiculosa] Length = 189 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFESTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|37992559|gb|AAR06458.1| small ribosomal protein 4 [Hypnella diversifolia] Length = 194 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P Y++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKMKIPNYLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|7576511|gb|AAF63868.1| ribosomal protein system 4 [Leucodon andrewsianus] Length = 190 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|239978418|ref|ZP_04700942.1| 30S ribosomal protein S4 [Streptomyces albus J1074] gi|291450314|ref|ZP_06589704.1| 30S ribosomal protein S4 [Streptomyces albus J1074] gi|291353263|gb|EFE80165.1| 30S ribosomal protein S4 [Streptomyces albus J1074] Length = 204 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRARKAEGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 + VNG V+ SYR + DV+ V+++S++ A + E + P Y+ VN + Sbjct: 119 IEVNGHKVDKPSYRVRPDDVVMVRERSREKHPFQVAREGGYDTEGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|37992455|gb|AAR06406.1| small ribosomal protein 4 [Catharomnion ciliatum] Length = 194 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNGYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P ++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLIYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|258645943|ref|ZP_05733412.1| ribosomal protein S4 [Dialister invisus DSM 15470] gi|260403312|gb|EEW96859.1| ribosomal protein S4 [Dialister invisus DSM 15470] Length = 197 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ ++ + K RR G N++G PK+ + R+ K S +GLQL KQK+K Sbjct: 1 MATNKNLRFKTSRRFGMNIYGHPKALKR-------QPAETRQKKMSEYGLQLAEKQKVKA 53 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ++ E++F + +A R G NL+S LE+RLD +VYRA F +I ARQ V+H Sbjct: 54 LY-NLLERQFYRYYDKARRMSGVVGENLLSLLETRLDNLVYRAGFARSIRQARQMVSHGL 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179 + V+G+ V+I SY + G VI +K+ + +A +L D+P Y+ + DN AT Sbjct: 113 IAVDGKKVDIPSYPVRPGQVITLKEAYRTNEMFKQAFLELKSFDLP-YVEKSFDNWSATL 171 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P +++PY + L+VE YS+ Sbjct: 172 VRTPLR-EELPYKDEVNETLIVELYSK 197 >gi|225376437|ref|ZP_03753658.1| hypothetical protein ROSEINA2194_02079 [Roseburia inulinivorans DSM 16841] gi|225211813|gb|EEG94167.1| hypothetical protein ROSEINA2194_02079 [Roseburia inulinivorans DSM 16841] Length = 197 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + R +R K S +GLQLR KQK K Sbjct: 1 MAVNKVPVLKRCRSLGLEPSYLGYDKKSNREL------KRANKKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK F + ++ AD+ +G T NL++ LESRLD +V+R F T ARQ V+H+ Sbjct: 55 IYGVL-EKPFHNYYERADQMKGMTGQNLMTILESRLDNVVFRLGFARTRKEARQIVDHKF 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 V VNG+ VNI SY K GDVIE+K+K+K + + + + R VP+++ V+ + + T Sbjct: 114 VTVNGKQVNIPSYLVKAGDVIEIKEKNKNIQRMKDIVEVTGGRLVPDWLEVDAEKLQGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PS + V + L+VE YS+ Sbjct: 174 KELPSREQ---IDVPVDEMLIVELYSK 197 >gi|291549394|emb|CBL25656.1| SSU ribosomal protein S4P [Ruminococcus torques L2-14] Length = 197 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + +N +S R+ S+ +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPIYLG---INKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A + G T NL+ LESRLD +V+R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKAKQQEGMTGENLMIILESRLDNVVFRLGLARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+K+ K E + A VPE++ + +N+ T Sbjct: 114 VLVNGKQVNIPSYLVKAGDVIEIKENKKGSQRYKEILEATAGNMVPEWLEADAENLRGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPNR---EAIDVPVDEMLIVELYSK 197 >gi|289599911|gb|ADD12906.1| ribosomal protein S4 [Hibbertia drummondii] Length = 189 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P L R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGSLPGLTSKRPKTR----SDLRNLSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I S Sbjct: 56 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I VK + K A + + ++P++++++ +I S Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLINQIIDSK---WI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|157689414|gb|ABV65263.1| ribosomal protein S4 [Aphloia theiformis] Length = 185 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----RVGSDLRNQSRSVKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD ++R TI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 56 AGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRHILVNGHIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + K A + + ++P++++++ +I S + + Sbjct: 116 PRDIITARDAQKSRALIQNYLDSSLHEELPKHLTLHPSQYKGLVNQIIDSK---WIGLKI 172 Query: 196 QPNLVVEFYSR 206 L+VE+YSR Sbjct: 173 NELLIVEYYSR 183 >gi|37992717|gb|AAR06537.1| small ribosomal protein 4 [Trachypus bicolor] Length = 192 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P ++ K S + L+L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRLRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D + +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SVGLKINELLVVEYYSR 190 >gi|7576585|gb|AAF63905.1| ribosomal protein system 4 [Leskea gracilescens] Length = 190 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|7576599|gb|AAF63912.1| ribosomal protein system 4 [Sanionia georgico-uncinata] Length = 190 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IALKINELLVVEYYSR 189 >gi|16565397|gb|AAL26213.1|AF313613_1 small ribosomal protein 4 [Austrobaileya scandens] Length = 190 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 9/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 MRRLKTLPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLL 55 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 56 RYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRLVDIP 115 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I K + + + + ++P++++++ +I S Sbjct: 116 SYRCKPRDIITTKDEHRSRTLIQNYIDSSPHEELPKHLTLHSLQYKGLVNQIVDSQ---W 172 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 VGLKINELLVVEYYSR 188 >gi|291087195|ref|ZP_06345679.2| ribosomal protein S4 [Clostridium sp. M62/1] gi|291075940|gb|EFE13304.1| ribosomal protein S4 [Clostridium sp. M62/1] gi|295092573|emb|CBK78680.1| SSU ribosomal protein S4P [Clostridium cf. saccharolyticum K10] Length = 197 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R + + + R+ +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLDLDPIYLGIDKKSNRNS------KRANKKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A R G NL+ LESRLD +++R F T RQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKASRMNGQVGTNLMIILESRLDNVLFRMGFGRTRKETRQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDVIE+K+K K + + A R VP ++ V+ +N+ T Sbjct: 114 VLVNGKCVNIPSYLVKAGDVIEIKEKYKSSQRYKDVLEVTAGRLVPAWLEVDQENLRGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KELPTRDE---IDVPVNEVLIVELYSK 197 >gi|160415782|gb|ABX39198.1| small ribosomal protein 4 [Dryptodon austrofunalis] Length = 188 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|28194673|gb|AAO33598.1|AF480953_1 ribosomal protein S4 [Dialytrichia mucronata] Length = 192 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 LNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|37992465|gb|AAR06411.1| small ribosomal protein 4 [Cladomnion ericoides] Length = 194 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + + ++ +P +++ + +I L Sbjct: 117 NIPSYRCKPQDFIIIKNEKNSEGVIDKNEDFYQKYKIPNHLTYSFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992619|gb|AAR06488.1| small ribosomal protein 4 [Orthostichopsis tetragona] Length = 191 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPHDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|42405302|gb|AAS13477.1| rps4 small ribosomal protein [Hypopterygium tamarisci] gi|157785986|gb|ABV74167.1| small ribosomal protein 4 [Hypopterygium discolor] Length = 194 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNGYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|134274701|emb|CAL30292.1| small ribosomal protein 4 [Cheilolejeunea trifaria] Length = 186 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K L K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQL 53 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD ++ TI ARQ VNHRH+ +N VNI Sbjct: 54 LKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHRHIFINDYIVNI 113 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK GD+I +K K K + + + L+++ VP +++ + + + Sbjct: 114 PSYNCKPGDIITIKNKEKSQSIINKNMNLSQKLQVPNHLTFDSTQLRGLVNQTIRR---E 170 Query: 190 PYPVIMQPNLVVEFYS 205 + + LVVE+YS Sbjct: 171 WIDLKINELLVVEYYS 186 >gi|145596878|ref|YP_001161175.1| 30S ribosomal protein S4 [Salinispora tropica CNB-440] gi|145306215|gb|ABP56797.1| SSU ribosomal protein S4P [Salinispora tropica CNB-440] Length = 202 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 9/203 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K R +G L + R + PG HG+ RK S + ++L KQ++K Y ++ Sbjct: 6 PKIKRSRALGIPLTPKCVRYFERRPFPPGQHGRSRK-STSDYKIRLLEKQRLKAQY-HVN 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E + R F R T LI LE+RLD +V R+ TI+ ARQ V HRH+ VNGR Sbjct: 64 EGQLRRAFTRVARLESKTGEALIVDLETRLDALVLRSGLARTIYQARQTVTHRHITVNGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIP 183 V+ S R + GDVI V S+ A L + AER P Y++VN ++ +R+P Sbjct: 124 RVDRPSARLRPGDVIAVATGSRTKAPFLVAAAGAHAAERSAP-YLAVNLADLTVRLIRLP 182 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + PV Q LVVE+YSR Sbjct: 183 LRSE---VPVTCQEQLVVEYYSR 202 >gi|42556456|gb|AAS19823.1| small ribosomal protein 4 [Mastigolejeunea auriculata] gi|134274699|emb|CAL30291.1| small ribosomal protein 4 [Mastigolejeunea auriculata] Length = 188 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTGKISKTK------IDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ TI +ARQ VNHRH+ +N VNI Sbjct: 54 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNIP 113 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 SYNCKPGDIITIKNKEKSQSIISKNINLSQKLQIPNHLTFDSTQLRGLVNQTIRR---EW 170 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 171 IDLKINELLVVEYYSR 186 >gi|37992653|gb|AAR06505.1| small ribosomal protein 4 [Pilotrichum procerum] Length = 194 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLK---ASSITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + +L ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNLELYQKFKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|32172406|sp|O22020|RR4_CYAME RecName: Full=30S ribosomal protein S4, chloroplastic Length = 190 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 19/206 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G KSP N R+ PG H + + Y G+ L+ +QK++ Sbjct: 1 MSRYLGPRVRIIRRLGILPAFTNKSP-NKRTGVPGEHAHKTRKLSEYAGV-LQGEQKLQY 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG I+ + F++A +SR T L+ LE+RLD +VYRA F PT+ AARQ VNH H Sbjct: 59 YYG-ITNNQLARYFRQAKKSRASTGIELLKMLETRLDHVVYRAGFAPTLPAARQLVNHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG V I S+ C+ +IEVK KS A +P Y+ V + FV Sbjct: 118 VKVNGNQVTIASFACQVNHIIEVKAKSPSSAQ-----------LPPYLQVEN-----QFV 161 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ ++ + LVVE+Y+R Sbjct: 162 KMIQPVEKDWLAFRVNELLVVEYYTR 187 >gi|63101075|gb|AAY33162.1| small ribosomal protein 4 [Rutenbergia madagassa] Length = 194 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKYEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SESIGLKINELLVVEYYSR 192 >gi|328881154|emb|CCA54393.1| SSU ribosomal protein S4p [Streptomyces venezuelae ATCC 10712] Length = 204 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG V+ S+R + DV+ V+++S+ A + A+ + P Y+ VN + Sbjct: 119 IQVNGGKVDKPSFRVRPDDVVMVRERSRTKPLFEMAREGGFAADGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|282866226|ref|ZP_06275273.1| ribosomal protein S4 [Streptomyces sp. ACTE] gi|282559010|gb|EFB64565.1| ribosomal protein S4 [Streptomyces sp. ACTE] Length = 204 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRARKAEGKTGEALVVELERRLDALVLRSGIAKTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 + VNG V+ S+R + DV++V+++S+ A + E + P Y+ VN + Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVQVRERSRSKVPFQVAREGGYDTEGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|160881758|ref|YP_001560726.1| RNA-binding S4 domain-containing protein [Clostridium phytofermentans ISDg] gi|189045375|sp|A9KJG7|RS4_CLOPH RecName: Full=30S ribosomal protein S4 gi|160430424|gb|ABX43987.1| RNA-binding S4 domain protein [Clostridium phytofermentans ISDg] Length = 198 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 12/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K R +G + R++ R K S +G QLR KQK K Sbjct: 1 MARDMSPVLKRCRALGLEPTFLGIDKKSNRNFA------RAGKKISEYGTQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK FR+ F +A + + G T NL+ LE RLD +++R + T ARQ V+H+ Sbjct: 55 IYGVL-EKPFRNNFDKAKKLKYGTTGENLLILLELRLDNVMFRMGYGRTRTEARQIVDHK 113 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178 HVLVNG+ VNI SY+ K GDVI +K+K K + ++ + R VP ++ +H+N+ T Sbjct: 114 HVLVNGKCVNIPSYQVKAGDVISIKEKCKSAQRYKDILEVTDGRTVPAWLEADHENLTGT 173 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 IP+ + V + L+VE YS+ Sbjct: 174 VKEIPTRDQ---IDVPVNEVLIVELYSK 198 >gi|37992587|gb|AAR06472.1| small ribosomal protein 4 [Lopidium concinnum] gi|37992589|gb|AAR06473.1| small ribosomal protein 4 [Lopidium concinnum] gi|37992591|gb|AAR06474.1| small ribosomal protein 4 [Lopidium plumarium] Length = 195 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 7/199 (3%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G KS + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V Sbjct: 58 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K + + + + ++ + +++ + +I L Sbjct: 118 DIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIGLKINELLVVEYYSR 193 >gi|7576591|gb|AAF63908.1| ribosomal protein system 4 [Lembophyllum divulsum] Length = 189 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|328488164|gb|AEB19895.1| small ribosomal protein 4 [Pachyschistochila trispiralis] Length = 191 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G + K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGISPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD + R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|42556516|gb|AAS19853.1| small ribosomal protein 4 [Trocholejeunea sandvicensis] Length = 188 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTGKISKTK------IDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ TI +ARQ VNHRH+ +N VNI Sbjct: 54 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNIP 113 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 SYNCKPGDIITIKNKEKSQSIISKNINLSQKTQIPNHLTFDSTQLRGLVNQTIRR---EW 170 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 171 IDLKINELLVVEYYSR 186 >gi|12330468|gb|AAG52771.1| ribosomal protein 4 [Dendroligotrichum squamosum] Length = 189 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + + A + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIXDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|121761855|gb|ABM65013.1| ribosomal protein S4 [Plagiomnium rhynchophorum] Length = 194 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R + Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLI 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKNGLVNQILDRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --FIDLKINELLVVEYYSR 192 >gi|63100975|gb|AAY33112.1| small ribosomal protein 4 [Pylaisia speciosa] Length = 191 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A + +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETLINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|37992649|gb|AAR06503.1| small ribosomal protein 4 [Pilotrichum bipinnatum] Length = 194 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLK---ASSITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + +L ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIELYQKFKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992415|gb|AAR06386.1| small ribosomal protein 4 [Aerobryopsis longissima] gi|37992417|gb|AAR06387.1| small ribosomal protein 4 [Aerobryopsis wallichii] Length = 192 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|260886902|ref|ZP_05898165.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185] gi|330839300|ref|YP_004413880.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185] gi|260863501|gb|EEX78001.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185] gi|329747064|gb|AEC00421.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185] Length = 197 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ S+ K R +G S + R +R+ K S +G+QL+ KQK K Sbjct: 1 MAIDRSATLKRCRSLGIEPGMVGISRQSKRQP------RRQARKVSEYGMQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR +++A G T NL+ LE R+D +VYR T ARQ V H H Sbjct: 55 IYGVL-EKQFRKYYEKAKTMPGVTGENLLGLLERRIDNVVYRLGLAQTRRQARQLVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATF 179 + VNG+ ++I S + D I + +KS+ A A ++P +++ + + T Sbjct: 114 IRVNGKRLDIPSALVRAEDEITIDEKSRSNAFFKALAENYKPLNLPAWLAADGAKLSGTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R PS + V + +VE YSR Sbjct: 174 TRYPSRDE---IDVPVNEQAIVELYSR 197 >gi|32344858|gb|AAM82188.1| ribosomal protein S4 [Erythrophyllopsis boliviana] Length = 195 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I + K + + +++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITINDGKKSQVMITKNVGFSQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|63191823|gb|AAY34871.1| small ribosomal protein subunit 4 [Pterygoneurum ovatum] Length = 195 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|42405296|gb|AAS13474.1| rps4 small ribosomal protein [Callicostella colombica] Length = 194 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K S + K S + ++L KQK++ +YG I+E++ Sbjct: 2 KIIRRLGVLPGLTNKISELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+ Sbjct: 58 LLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVD 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 118 IPSYRCKPQDSITIKNQQKSETIISKNLEFYQKIKIPNHLTYNFLEKKGLINQILDRD-- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -SIGLKINELLVVEYYSR 192 >gi|32344860|gb|AAM82189.1| ribosomal protein S4 [Erythrophyllopsis fuscula] Length = 195 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRVARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I + K + + +++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITINDHKKSQVMITKNVGFSQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|295839931|ref|ZP_06826864.1| ribosomal protein S4 [Streptomyces sp. SPB74] gi|302517976|ref|ZP_07270318.1| ribosomal protein S4 [Streptomyces sp. SPB78] gi|318057087|ref|ZP_07975810.1| 30S ribosomal protein S4 [Streptomyces sp. SA3_actG] gi|318077859|ref|ZP_07985191.1| 30S ribosomal protein S4 [Streptomyces sp. SA3_actF] gi|197696761|gb|EDY43694.1| ribosomal protein S4 [Streptomyces sp. SPB74] gi|302426871|gb|EFK98686.1| ribosomal protein S4 [Streptomyces sp. SPB78] Length = 204 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRARKAEGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 + VNG V+ S+R + DV+ V+++S+ A + + + P Y+ VN + Sbjct: 119 IEVNGTKVDKPSFRVRPDDVVMVRERSRSKHPFQVAREGGYDTDGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|86438888|emb|CAJ55420.1| small ribosomal protein 4 [Plagiochila elegans] Length = 187 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N VNI Sbjct: 57 LKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY C+ GD+I + K K + V + ++ +P +++ + + + ++ + Sbjct: 117 PSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR---E 173 Query: 190 PYPVIMQPNLVVEF 203 + + LVVE+ Sbjct: 174 WINLKINELLVVEY 187 >gi|293634011|gb|ADE60385.1| ribosomal protein subunit 4 [Oligotrichum austroaligerum] Length = 189 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R TI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|121761847|gb|ABM65009.1| ribosomal protein S4 [Plagiomnium integrum] Length = 191 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRVARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + ++ +P++++ N N +I Sbjct: 117 SYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD---S 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|22854733|gb|AAN09786.1| small ribosomal protein 4 [Sclerodontium clavinerve] Length = 191 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 59 VRIARKAKGSTGQILLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNNRIVNIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K +++ + +++ VP +++ N +I L Sbjct: 119 RCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|26554211|ref|NP_758145.1| 30S ribosomal protein S4 [Mycoplasma penetrans HF-2] gi|41017842|sp|Q8EV12|RS4_MYCPE RecName: Full=30S ribosomal protein S4 gi|26454220|dbj|BAC44549.1| ribosomal protein S4 [Mycoplasma penetrans HF-2] Length = 202 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 104/208 (50%), Gaps = 10/208 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN--TRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ S K RR G +L + + R+Y PG HG +R Y G QL+ KQKM Sbjct: 1 MSRYLGSITKKSRRYGFSLLETEREFIKGKKRTYAPGQHGNKRVKLSGY-GEQLQEKQKM 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG +++++FR F A +G + N LESRLD +VYR F PT AARQ VNH Sbjct: 60 MYLYG-LNDRQFRRTFVIAKHMKGALTLNTFIALESRLDNLVYRMGFAPTRRAARQLVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+L++G+ V I S K IEV KSK L V + A +++ + Sbjct: 119 GHILLDGKKVTIPSCMVKLEQTIEVAPKSKDLPIV---AAGASNTPCKFVDSDLKTKKGK 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VR P + P + VVE+++R Sbjct: 176 YVRFPERDE---LPEGINEAYVVEWFNR 200 >gi|47606946|gb|AAT36393.1| ribosomal protein subunit 4 [Rhizogonium pennatum] Length = 195 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|17025871|gb|AAL32100.1| ribosomal protein 4 [Mitthyridium sp. Streimann 63086] Length = 195 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K P S ++ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKLIRRLGTLSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 117 VNIPSYQCKSQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NQESIGLKINELLVVEYYSR 193 >gi|67036074|gb|AAY62963.1| small ribosomal protein subunit 4 [Ptychodium plicatum] Length = 194 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G ++P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNRTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE+RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLETRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|289599866|gb|ADD12884.1| ribosomal protein S4 [Davilla nitida] Length = 188 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGSLPGLTSKRPKPR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKY 55 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R VNI SY Sbjct: 56 VRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVNIPSY 115 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D+I VK + K A + + ++P++++++ +I S Sbjct: 116 RCKPRDIITVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVG 172 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 LKINELLVVEYYSR 186 >gi|297195512|ref|ZP_06912910.1| 30S ribosomal protein S4 [Streptomyces pristinaespiralis ATCC 25486] gi|197722128|gb|EDY66036.1| 30S ribosomal protein S4 [Streptomyces pristinaespiralis ATCC 25486] Length = 204 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK + ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNS-DYKVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISEK+ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISEKQMARAYDRARKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG V+ S+R + DV+ V+++S++ A + A+ + P Y+ VN + Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVMVRERSREKTLFQVAREGGFAADGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P + PVI LVVE+Y+R Sbjct: 179 RLDRDPQRKE---VPVICDEQLVVEYYAR 204 >gi|160415792|gb|ABX39203.1| small ribosomal protein 4 [Dryptodon torquatus] Length = 188 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|7576569|gb|AAF63897.1| ribosomal protein system 4 [Hypnum imponens] Length = 190 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|90970058|gb|ABE02798.1| ribosomal protein S4 [Passiflora deidamioides] Length = 183 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIVGSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPTGPVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|42556504|gb|AAS19847.1| small ribosomal protein 4 [Schistochila laminigera] Length = 191 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI AARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPAARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P ++ + + + + Sbjct: 117 SYNCELGDIIAIKNKKKSQLMINKNLNLLQKLKIPNHLIFDSTQLRGLVDQ---RINRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|15145844|gb|AAK83540.1| rps4 [Tayloria orthodonta] gi|42718070|gb|AAS38457.1| rps4 [Tayloria chiapensis] Length = 189 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PT+ ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNQQKSQAIINKNIEFSQKSKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|63101081|gb|AAY33165.1| small ribosomal protein 4 [Hookeriopsis cuspidata] Length = 195 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K S + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIIRRLGVLPGLTNKIAELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYSI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIGLKINELLVVEYYSR 193 >gi|42794697|gb|AAS45744.1| Rps4 [Semiramisia speciosa] Length = 211 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K +L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKXXXXXXXXRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + +++G L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIXGKAKGSPGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKHKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|47606950|gb|AAT36395.1| ribosomal protein subunit 4 [Trachyloma planifolium] gi|63101077|gb|AAY33163.1| small ribosomal protein 4 [Trachyloma planifolium] Length = 195 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + + ++ +P ++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|325479161|gb|EGC82258.1| ribosomal protein S4 [Anaerococcus prevotii ACS-065-V-Col13] Length = 197 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + +K R +G + + + R+ RR++K S +G+Q R KQK K Sbjct: 1 MAVSKDPVYKKARALGISPAYLGYTGESNRTLP------RRRAKLSEYGMQQREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FR ++ A + +G T LI E RLD + +R+ T ARQ V H H Sbjct: 55 IYG-VSEKQFRGYYEAASKMKGQTGEQLIILCERRLDNVAFRSGLARTRREARQIVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 + VNG+ V+I SY+ +EGDVIEV++KS+ + A V E+++ + +N+ T Sbjct: 114 LTVNGKQVDIPSYQIEEGDVIEVREKSRSSQLFKAIKETNATFGVVEWLTSDIENLKVTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ +D+ PV + ++VEFYS+ Sbjct: 174 DRFPTR-EDIDIPV--EERMIVEFYSK 197 >gi|291562745|emb|CBL41561.1| SSU ribosomal protein S4P [butyrate-producing bacterium SS3/4] Length = 197 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R + + + R +R K S +GLQLR KQK K Sbjct: 1 MAVDRVPVLKRCRSLDLDPIYLGIDKKSNRES------KRANKKISEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A+R G T NL+ LE RLD +++R F T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYDKAERLNGQTGENLMILLERRLDNVIFRLGFARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GDV+E+++K+K + A R VP ++ +H+N+ Sbjct: 114 VLVNGKCVNIPSYLVKAGDVVEIREKNKGDNHYKLVLETTAGRLVPAWLESDHENLKGEI 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + L+VE YS+ Sbjct: 174 KTLPTREE---IDVPVNEMLIVELYSK 197 >gi|239939944|ref|ZP_04691881.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 15998] gi|239986428|ref|ZP_04707092.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 11379] gi|291443375|ref|ZP_06582765.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 15998] gi|291346322|gb|EFE73226.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 15998] Length = 204 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 + VNG V+ S+R + D+++V+++S+ A + E + P Y+ VN + Sbjct: 119 IEVNGGKVDKPSFRVRPDDIVQVRERSRSKVPFQVAREGGYDTEGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|320011906|gb|ADW06756.1| ribosomal protein S4 [Streptomyces flavogriseus ATCC 33331] Length = 204 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRARKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 + VNG V+ S+R + DV++V+++S+ A + + + P Y+ VN + Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVQVRERSRSKVPFQVAREGGYDTDGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|160415804|gb|ABX39209.1| small ribosomal protein 4 [Bucklandiella crispipila] Length = 188 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|67035718|gb|AAY62790.1| small ribosomal protein subunit 4 [Calymperes lonchophyllum] Length = 194 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG ++E+ Sbjct: 1 VKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-LTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R VPTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIVPTIPGARQLVNHRHILVNNCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SY+CK D I +K K +++ + + +P +++ N +I L Sbjct: 117 NIPSYQCKPQDFITIKDPQKYQTMIVKNINFSPKYKIPSHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|37992665|gb|AAR06511.1| small ribosomal protein 4 [Ptychomnion cygnisetum] Length = 194 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + + ++ +P +++ + +I L Sbjct: 117 NIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992617|gb|AAR06487.1| small ribosomal protein 4 [Orthostichopsis praetermissa] Length = 191 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|63078652|gb|AAY29412.1| ribosomal protein S4 [Tuerckheimia valeriana] Length = 194 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVYFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|33413189|emb|CAD86770.1| ribosomal protein small subunit 4 [Dicranoloma billarderi] Length = 190 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I VK + K A +++ +++ VP +++ + +I L Sbjct: 117 YRCKPQDFITVKNRQKSQAMIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|157689466|gb|ABV65289.1| ribosomal protein S4 [Elaeagnus sp. Nickrent 2898] Length = 184 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R SK S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKKP----RAGSDLRNQSRPSKKSQYRIRLEEKQKLRFHYG-LTEQQLLKYIRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+ VNGR V+I SYRCK Sbjct: 56 GKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHIFVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I VK + K A V A ++P++++++ +I S + + Sbjct: 116 RDIITVKDEQKSRALVQNYLDSASHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|7576619|gb|AAF63922.1| ribosomal protein system 4 [Pilosium chlorophyllum] Length = 190 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTKKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE R D +++R TI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMATTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY+CK D I +K + K A + + + E VP +++ N +I L Sbjct: 117 SYQCKPQDFITIKNQQKFEAIISKNIEFYQESKVPNHLTYNSLGKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|74273233|gb|ABA01316.1| ribosomal protein S4 [Barteria fistulosa] Length = 186 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 LAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I + + K A + + + + ++P+++++ +I S + Sbjct: 116 KPRDTIAARDEQKSRALIQNSLDSSPQEELPKHLTLQPFQYNGLVNQIIDSK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|78102657|gb|ABB21542.1| small ribosomal protein 4 [Plagiochila fastigiata] gi|78102695|gb|ABB21561.1| small ribosomal protein 4 [Plagiochila montagnei] Length = 189 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+L+N Sbjct: 57 RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHILINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I + K K A V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|63078585|gb|AAY29379.1| ribosomal protein S4 [Pleurochaete squarrosa] Length = 191 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|47606894|gb|AAT36367.1| ribosomal protein subunit 4 [Euptychium cuspidatum] Length = 199 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S ++ K S + ++L KQK++ +YG Sbjct: 1 YRGXRVKIIRRLGTLQGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E R D I++R PTI ARQ VNHRH+LV Sbjct: 58 -ITEQQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTISGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I VK + + + ++ +P +++ +I Sbjct: 117 NDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197 >gi|7576525|gb|AAF63875.1| ribosomal protein system 4 [Orthostichopsis tetragona] Length = 190 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPHDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|228480564|gb|AAY62917.2| small ribosomal protein subunit 4 [Pleurozium schreberi] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L LE RLD +++R PTI ARQ VNH H+LVN V Sbjct: 57 QLLNYVRJARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|254283192|ref|ZP_04958160.1| ribosomal protein S4 [gamma proteobacterium NOR51-B] gi|219679395|gb|EED35744.1| ribosomal protein S4 [gamma proteobacterium NOR51-B] Length = 154 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 67/158 (42%), Positives = 95/158 (60%), Gaps = 5/158 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QLR KQK+++ YG + EK+FR+ +KEA R +G T NL+ LE RLD +VYR F T Sbjct: 1 MQLREKQKVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLECRLDNVVYRMGFGSTR 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168 ARQ V H+ +L+N VNI SY+ K GDV+ +++K+K+ V A LAE R P +I Sbjct: 60 AEARQLVAHKGILINNAVVNIPSYQVKPGDVVSIREKAKKQLRVQAALSLAEQRGEPVWI 119 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VN++ + TF P + NL+VE YS+ Sbjct: 120 EVNNEKLEGTFKAKPERAD---LSSEINENLIVELYSK 154 >gi|37992595|gb|AAR06476.1| small ribosomal protein 4 [Meteoridium remotifolium] Length = 193 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN V+ Sbjct: 57 LLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 IPSYRCKPQDFVTMKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|67036028|gb|AAY62940.1| small ribosomal protein subunit 4 [Lindigia aciculata] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D + +K K K + + +L ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFVTIKNKRKSENIISKNMELYQKYKIPNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992709|gb|AAR06533.1| small ribosomal protein 4 [Trachyxiphium vagum] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---IIQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K++ K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKKQRKSEAIISKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035680|gb|AAY62771.1| small ribosomal protein subunit 4 [Schistomitrium brevi-apiculatum] Length = 192 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+ K+ + + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLXTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 LNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + V + + ++ VP +++++ +I L Sbjct: 117 PSYRCKPQDFISIKNRQKSQSIVAKTIEFSQEYKVPNHLTLDSLEKKGLVNQI---LNHE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|49182789|gb|AAT57856.1| small ribosomal protein [Radula perrottetii] Length = 195 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G+ K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGDLPGLSNKTLKPKSSY---IDRSVSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ + A ++G T L+ LE RLD ++ PTI ARQ VNH+H+ +N + Sbjct: 57 KQLLKYVRIARNAKGSTGQILLQLLEMRLDNTIFCLGMAPTIPGARQLVNHKHIFINNST 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K + + + + ++P ++ + + + + Sbjct: 117 VDIPSYNCELGDIITIRNTHKSKSIITKNINSFRKLEIPNHLIFDSTQLRGLINQ---RI 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 PCNWISLKINELLVVEYYSR 193 >gi|37992485|gb|AAR06421.1| small ribosomal protein 4 [Daltonia gracilis] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKVIRRLGVLPGLTNKVLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEVIINKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CESIGLKINELLVVEYYSR 192 >gi|37992577|gb|AAR06467.1| small ribosomal protein 4 [Lepidopilum scabrisetum] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSNS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K A + + + ++ +P Y++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNKKKSEAIISKNIEFYQKIKIPNYLTYNFVEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|320173940|gb|EFW49116.1| SSU ribosomal protein S4p (S9e) [Shigella dysenteriae CDC 74-1112] Length = 152 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 63/156 (40%), Positives = 98/156 (62%), Gaps = 5/156 (3%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 +R KQK+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T Sbjct: 1 MREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAE 59 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISV 170 ARQ V+H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V Sbjct: 60 ARQLVSHKAIMVNGRIVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEV 119 Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + M TF R P + +L+VE YS+ Sbjct: 120 DAGKMEGTFKRKPERSD---LSADINEHLIVELYSK 152 >gi|80974168|gb|ABB53777.1| small ribosomal subunit protein 4 [Hampeella pallens] Length = 197 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 8/202 (3%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K P + ++ K S + ++L KQK++ +YG I Sbjct: 1 GPRVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG-I 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHR +LVN Sbjct: 57 TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNILFRLNMAPTIPGARQLVNHRQILVNN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184 VNI SYRCK D I VK + + +++D +P ++ + +I Sbjct: 117 CIVNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKDKIPNHLIYSSLEKKGLVNKI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195 >gi|63101051|gb|AAY33150.1| small ribosomal protein 4 [Palisadula chrysophylla] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGILPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I+++ PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRVARKAKGSTGEVLLQLLEMRLDNIIFQLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|182439823|ref|YP_001827542.1| 30S ribosomal protein S4 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780487|ref|ZP_08239752.1| ribosomal protein S4 [Streptomyces cf. griseus XylebKG-1] gi|226695079|sp|B1W3H7|RS4_STRGG RecName: Full=30S ribosomal protein S4 gi|178468339|dbj|BAG22859.1| putative 30S ribosomal protein S4 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660820|gb|EGE45666.1| ribosomal protein S4 [Streptomyces cf. griseus XylebKG-1] Length = 204 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 + VNG V+ S+R + D+++V+++S+ A + + + P Y+ VN + Sbjct: 119 IEVNGGKVDKPSFRVRPDDIVQVRERSRSKVPFQVAREGGYDTDGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|37992583|gb|AAR06470.1| small ribosomal protein 4 [Leucomium strumosum] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKLKIPNHLTYNFLEKKGLINQI---LH 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|12330488|gb|AAG52781.1| ribosomal protein 4 [Oedipodium griffithianum] Length = 189 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 10/195 (5%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 R+G K+ PG Q K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTSQLK----PGYINQSVSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLN 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 56 YVRIARGAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + +++ +P +++ N +I L Sbjct: 116 YRCKPQDFITIKDRQKSQAIIAKNMDFSQKYKIPNHLTFNSLQKKGLVNQI---LDRESI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 GLKINELLVVEYYSR 187 >gi|37992407|gb|AAR06382.1| small ribosomal protein 4 [Actinodontium sprucei] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLVSKISELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K A + + + ++ +P +++ N +I Sbjct: 117 DIPSYRCKPQDFITIKNKKKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIGLKINELLVVEYYSR 192 >gi|3098208|gb|AAC15552.1| small ribosomal protein 4 [Tayloria lingulata] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN R V Sbjct: 57 QLLNYVRVARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHIIVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P+++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKARQKSQVIINKNIEFYQKHKIPDHLIYNSLKKQGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63101029|gb|AAY33139.1| small ribosomal protein 4 [Pseudoleskeopsis imbricata] Length = 189 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|78102633|gb|ABB21530.1| small ribosomal protein 4 [Plagiochila circinalis] Length = 189 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|74273201|gb|ABA01300.1| ribosomal protein S4 [Passiflora cirrhiflora] Length = 183 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIVGSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|42556466|gb|AAS19828.1| small ribosomal protein 4 [Nipponolejeunea pilifera] Length = 192 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G ++P SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGFTSRTPKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ PTI +ARQ VNHRH+ +N +VN+ Sbjct: 57 KYVRIARKTKGSTGQILLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINNYTVNVP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + + ++ ++P +++ N + + Sbjct: 117 SYNCEPGDIITIKNKEKSQSIITKNINSFQKLEIPNHLTFNSIELQGFVNQTIRR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|46811052|gb|AAT01844.1| small ribosomal protein 4 [Schistochila appendiculata] Length = 195 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 LKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY C+ GD+I ++ K K + + L ++ P +++ + + + Sbjct: 117 PSYNCELGDIIGIQNKQKSQSMITRNLGLLQKLKTPNHLTFDSTQLRGLVNQKVHR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 FINLKINELLVVEYYSR 190 >gi|7576545|gb|AAF63885.1| ribosomal protein system 4 [Haplohymenium triste] Length = 190 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|63191827|gb|AAY34873.1| small ribosomal protein subunit 4 [Tortula subulata] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVIITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|111283700|gb|ABH09200.1| small ribosomal protein 4 [Lejeunea cavifolia] Length = 188 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K L K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-V 53 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++ TI ARQ VNHRH+ +N Sbjct: 54 TERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHRHISIND 113 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 VNI SY CK GD+I +K K K + + L+++ P +++ + + + Sbjct: 114 YIVNIPSYNCKPGDIITIKNKEKSQLIINKNINLSQKLQTPNHLTFDSTKLRGLVNQTIR 173 Query: 185 SLKDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 174 R---EWIDLKINELLVVE 188 >gi|50299385|gb|AAT73597.1| small ribosomal protein 4 [Plagiochila deflexa] Length = 183 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 5/187 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N VNI SY C+ GD+I + + K ++V + ++ +P +++ + + + Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNEQKSRSTVTKNINSFQKLKIPSHLTFDSTQLRGSV 176 Query: 180 VRIPSSL 186 ++ + Sbjct: 177 NQMINRE 183 >gi|42794666|gb|AAS45730.1| Rps4 [Polyclita turbinata] Length = 211 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K S + ++LR Q ++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTANSRRTQSRFVKKK--KSQYHIRLRENQXLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSXGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKHKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|50235328|gb|AAT70697.1| Rps4 [Rhynchostegiella tenella] Length = 195 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPRDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42794643|gb|AAS45719.1| Rps4 [Ceratostema silvicola] Length = 211 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 21/217 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++ + QK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRXQXXQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---------AERDVPEYIS 169 RHVLVNGR ++I SYRCK D+I ++ K A + + Q + VP +++ Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE--KSRALIQNSFQNLFDLPSHKRKRKRVPYHLT 173 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +N +I ++ + ++ LVVE+YSR Sbjct: 174 LNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|32892094|gb|AAP88986.1| ribosomal protein S4 [Passiflora sidifolia] Length = 183 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-VTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDST---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|63101083|gb|AAY33166.1| small ribosomal protein 4 [Amblytropis hispidula] Length = 193 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGTLPGLTNKIPELKSSS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD ++R PTI ARQ VNHRH++VN V+ Sbjct: 57 LLNYVRIAKKAKGSTGEVLLQLLEMRLDNXIFRLGMAPTIPGARQLVNHRHIVVNDYIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 IPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKIKIPNHLTYNFIEKKGLINQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|66866245|gb|AAY57791.1| small ribosomal protein 4 [Rhacocarpus purpurascens] Length = 200 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 13/205 (6%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L+N R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVR 181 V+I SYRCK D I VK + K A + D +P +++ N + Sbjct: 117 VDIPSYRCKPQDFITVKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYNSLKKKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRELIGLKINELLVVEYYSR 198 >gi|63101067|gb|AAY33158.1| small ribosomal protein 4 [Jaegerina scariosa] Length = 191 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTSQLKSGS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYQCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|222139880|ref|YP_002519947.1| ribosomal protein S4 [Ephedra equisetina] gi|220983548|dbj|BAH11315.1| ribosomal protein S4 [Ephedra equisetina] Length = 209 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 14/212 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMK 59 MS+ + KI RR+ K P + +H R K S + + L+ KQK++ Sbjct: 4 MSRYLGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIR 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +YG ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHR Sbjct: 60 FHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDN 174 H+LVN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 119 HILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQ 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 179 NKGIVNKIIDTKD---LQLKIKEMLVIEYYSR 207 >gi|67035752|gb|AAY62807.1| small ribosomal protein subunit 4 [Zygodon bartramioides] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNHRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDLITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 REFIGLKINELLVVEYYSR 192 >gi|268609565|ref|ZP_06143292.1| small subunit ribosomal protein S4 [Ruminococcus flavefaciens FD-1] Length = 199 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 110/209 (52%), Gaps = 13/209 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+ ++ K R +G + G K + K S +GLQL+ KQK+ Sbjct: 1 MAVQKEPILKKCRYLGISPAVMGVSKKESIRFKNA------NNRKKISEYGLQLKEKQKL 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + EK+FR F A++ G NLI+ LESRLD++VYR T ARQ V H Sbjct: 55 KFIYGVL-EKQFRHYFAIAEKMEGKAGDNLITVLESRLDSVVYRMGLALTRREARQLVVH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVA 177 H VNG+ VNI SYR K GDVI +K+K + + +R VP +++ N D+ A Sbjct: 114 SHYTVNGKKVNIPSYRVKVGDVIALKEKDRTSEKFKATVEETKDRLVPVWLTANKDDFSA 173 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 T R+PS +D+ Y V +L+VE YS+ Sbjct: 174 TVNRLPS-AEDIDYEVAT--HLIVELYSK 199 >gi|75858251|gb|ABA28699.1| small ribosomal protein 4 [Lycopodium clavatum] Length = 190 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+GE K+P Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGELPGLTHKTPKLKPDYS---NQSTSSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R++N+ S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRAINVPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I + +S+ + + +++++ +P +++++ +I Sbjct: 117 YRCKPKDIITTRDRSESRTIIAKNNKISQTYKIPNHLTLHSLQNKGLVNKIIDR---ESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLNINELLVVEYYSR 188 >gi|111283704|gb|ABH09202.1| small ribosomal protein 4 [Goebelobryum unguiculatum] Length = 188 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 8/195 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ SY + K S + ++L KQK++ ++G + Sbjct: 1 GPRVKIIRRLGALPGLTGKTLRPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHHG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A ++G T L+ E RLD ++R TI ARQ VNHRH+L+N Sbjct: 57 TERQLLKYVRIARGAKGSTGQVLLQLFEMRLDNTIFRLGMASTIPEARQLVNHRHILINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD I VK + K + ++ L ++ +P +++++ + + + Sbjct: 117 NIVDIPSYNCEPGDTITVKTEQKSQSMIIRNINLFQKSKIPSHLTLDAAGLRGFVNQTIN 176 Query: 185 SLKDVPYPVIMQPNL 199 + + L Sbjct: 177 R---EWIDLKINELL 188 >gi|7576575|gb|AAF63900.1| ribosomal protein system 4 [Isopterygium tenerum] Length = 190 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V+I SY Sbjct: 59 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D+I +K + K + + + ++ +P +++ N +I Sbjct: 119 RCKPHDLITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQIIDR---ESIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|67035951|gb|AAY62902.1| small ribosomal protein subunit 4 [Neckera pennata] Length = 194 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + +L ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|307694124|ref|ZP_07636361.1| 30S ribosomal protein S4 [Ruminococcaceae bacterium D16] Length = 200 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K + + + G K N GQ R+ + Y +QL KQK+ Sbjct: 1 MARNMQPIAKRCKALNLSPAAMGYAKKTTNRNPK-----GQMRRKQSEY-AMQLTEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG I EK+F +++A R G T NL++ +E RLD +VYR F T ARQ V H Sbjct: 55 KFVYG-IMEKQFHMYYEKATRMPGKTGENLLTLIERRLDNVVYRLGFAMTRREARQLVTH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS--QLAERDVPEYISVNHDNMV 176 H VNG+ V+I S+ K GDVIEV++KS+ +VP+++ + + Sbjct: 114 GHFTVNGQRVDIPSFLVKVGDVIEVREKSRSSVKFKRLLGEDAPVVNVPKWLDHAKNTLQ 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V +P D+ +PV + +L+VE YS+ Sbjct: 174 GKVVALPVR-DDIDFPV--EEHLIVELYSK 200 >gi|11228637|gb|AAG33104.1| small ribosomal protein 4 [Dicranum scoparium] gi|20531107|gb|AAM27374.1| ribosomal protein 4 [Dicranum scoparium] Length = 191 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+ ++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITGRQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I ++ + K A +++ +++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|15145842|gb|AAK83539.1| rps4 [Tayloria serrata var. tenuis] Length = 189 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTSKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+L+N R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576603|gb|AAF63914.1| ribosomal protein system 4 [Papillaria nigrescens] Length = 190 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|12330518|gb|AAG52796.1| ribosomal protein 4 [Scopelophila cataractae] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VBI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNRLVBIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 CCKPQDFITIKDRQKSQALITKHIDFYQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|67036122|gb|AAY62987.1| small ribosomal protein subunit 4 [Taxiphyllopsis iwatsukii] Length = 192 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K K K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKSQDFITIKNKRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|63078568|gb|AAY29371.1| ribosomal protein S4 [Chionoloma bombayense] Length = 192 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R +NI Sbjct: 57 LNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIINI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LIGLKINELLVVEYYSR 190 >gi|12330532|gb|AAG52803.1| ribosomal protein 4 [Conostomum tetragonum] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|28194679|gb|AAO33601.1|AF480956_1 ribosomal protein S4 [Aloina ambigua] Length = 195 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P R + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLSNKIP---RLKSSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DQESIGLKINELLVVEYYSR 193 >gi|59803316|gb|AAX07766.1| Rps4 [Riccardia capillacea] Length = 201 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 8/206 (3%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S + KI RR+G + + P + SY + K S + L+L KQK++ + Sbjct: 1 SVYRGPRTKIIRRLGVSPGLTSRIPKSRSSY---IDRSAPNKKISQYRLRLEEKQKLRFH 57 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 +G ++EK+ + A +++G T L+ LE RLD ++R VPTI AARQ VNHRHV Sbjct: 58 HG-VTEKQLLNYVCVAKKAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHV 116 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATFV 180 L+N V+I SY CK GD+I +K + + + + + +P +++ + + Sbjct: 117 LINANMVDIPSYNCKTGDIITIKNRVRNQLELESNRISVQKPGIPNHLAFESIDFRGSVN 176 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + LVVE+YSR Sbjct: 177 RTIDR---EGIDLKINELLVVEYYSR 199 >gi|187763094|ref|YP_001876569.1| ribosomal protein S4 [Welwitschia mirabilis] gi|254809472|sp|B2Y1V2|RR4_WELMI RecName: Full=30S ribosomal protein S4, chloroplastic gi|163311624|gb|ABY26782.1| ribosomal protein S4 [Welwitschia mirabilis] gi|220983467|dbj|BAH11236.1| ribosomal protein S4 [Welwitschia mirabilis] Length = 201 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P + R K S + L+ KQK++ Sbjct: 1 MSRYLGPRFKIIRRLKTLPGLTSKRPKYKKRVR--RRFSRPWWKKSQHLICLQEKQKIRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ R A R++G T L+ LE RLD I+++ TI AARQ VNHRH Sbjct: 59 HYG-LTERQLRQYINIAKRAQGSTGQVLLQLLEMRLDNIIFQLGIARTIPAARQIVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERDVPEYISVNHDNMVAT 178 VLVNGR V+I SYRCK DV+ +K K+ + + + R VP +++++ Sbjct: 118 VLVNGRVVDIPSYRCKPQDVLTIKTKNPEELRTIINKNRSKFRRKVPYHLTLDLAQNKGI 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFY 204 +I + +Q LV+E+Y Sbjct: 178 VNKIIDRKD---IQLKIQEMLVIEYY 200 >gi|7109197|gb|AAF36674.1| ribosomal protein 4 [Uleastrum paraguense] gi|67035650|gb|AAY62756.1| small ribosomal protein subunit 4 [Uleastrum paraguense] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K ++ + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGPLPGLTNK---ISKLKSGSISQPTSNKKISQYRIRLEXKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K +++ +++ VP +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQTMIIKNLDFSQKIKVPNHLTFNSLEKKGLVNQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|78102725|gb|ABB21576.1| small ribosomal protein 4 [Plagiochila validissima] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I + K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWINLKINELLVV 188 >gi|37992689|gb|AAR06523.1| small ribosomal protein 4 [Squamidium nigricans] Length = 192 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 PSYRCKPQDFVTMKNQRKSETIINKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|15145838|gb|AAK83537.1| rps4 [Tayloria grandis (D.G.Long) Goffinet & A.J.Shaw, 2002] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRLKSQALINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576757|gb|AAF63975.1| small ribosomal protein 4 [Dawsonia papuana] Length = 191 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTSQLKSGY---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI Sbjct: 57 NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K +++ +++ +P ++ NH +I L Sbjct: 117 SYRCKPQDSITIKNRQKSQNIIVKNIDFSQKYKIPNHLIFNHLERKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|118577538|gb|ABL07135.1| small ribosomal protein 4 [Peperomia congesta] Length = 184 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K PV+ S L Q R K S + ++L KQK++ +YG + E++ + A Sbjct: 1 LPGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNG V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + K V + A R ++P++++++ +I S + + Sbjct: 116 RDIITTRNAQKSKILVQNSMDSASREELPKHLTLDSSQYKGIVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|16565382|gb|AAL26206.1|AF313605_1 small ribosomal protein 4 [Huperzia lucidula] Length = 192 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+GE K+P Y ++ K S + ++L KQK++ ++G ++E++ Sbjct: 1 IIRRLGELPGLTRKTPKXKPDY---INKSTPNKKVSQYCIRLEEKQKLRFHHG-LAEQQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R++N+ Sbjct: 57 LKYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRAINV 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D+I + + + A + + + ++ +P +++++ V +I Sbjct: 117 PSYRCKPKDIITTRDRPESRARITKNYEFSQTYKIPNHLTLHSLQSVGLVNKIVDR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIDLNINELLVVEYYSR 190 >gi|78102705|gb|ABB21566.1| small ribosomal protein 4 [Plagiochila pachyloma] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKALKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI A Q VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGAXQXVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C GD+I V+ + K + V + ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCXPGDIITVRNEQKSQSXVTKNINSFQKLKMPSHLTFDSTQLRGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|28194767|gb|AAO33645.1|AF481000_1 ribosomal protein S4 [Tortula subulata] Length = 194 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLSNKIPHLKSSS---TTQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + ++ +P +++ N+ +I L Sbjct: 117 NIPSYRCKPQDFITIKDRKKSQVMITKNVDFYQKSKIPNHLTFNYLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|16565365|gb|AAL26201.1|AF313594_1 small ribosomal protein 4 [Ophioglossum reticulatum] Length = 194 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 12/200 (6%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+G NL G K + G ++ S + ++L AKQ+++ YG ++E++ Sbjct: 1 LIRRLG-NLPGLTKKSPKSEGIGSDQPVSKK---ISQYCIRLEAKQRLRLNYG-LTERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R+RG T + LE RLD I++R PTI ARQ VNHRH+LVN R V++ Sbjct: 56 LKYVRIARRARGSTGQVSLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDRVVDV 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVN---HDNMVATFVRIPSSL 186 SY C D+I V+ + + + + + E ++P ++S++ D + RI Sbjct: 116 PSYCCGPNDIITVRDRKNSQDLIRKNMESSYESEIPNHLSLSLSKSDKLKGFVNRIIDR- 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 175 --ESIGLEVNELLIVEYYSR 192 >gi|32892110|gb|AAP88994.1| ribosomal protein S4 [Passiflora incarnata] Length = 183 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLHSFPQEKLPKHLTLHPFQYKGLVNQIIDST---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|160415808|gb|ABX39211.1| small ribosomal protein 4 [Niphotrichum elongatum] Length = 188 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|47606936|gb|AAT36388.1| ribosomal protein subunit 4 [Pyrrhobryum paramattense] Length = 194 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P T S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLTSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLSQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDQEKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESISLKINELLVVEYYSR 192 >gi|63191789|gb|AAY34854.1| small ribosomal protein subunit 4 [Tetraphis pellucida] Length = 190 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RRLGVLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + +++ +P ++++N ++ L Sbjct: 117 YRCKPQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LDREFI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLKINELLVVEYYSR 188 >gi|50235340|gb|AAT70703.1| Rps4 [Clasmatodon parvulus] Length = 195 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D + +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|328488188|gb|AEB19907.1| small ribosomal protein 4 [Schistochila gayana] Length = 191 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRSGILPGLTSKTLKPKSSY---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + ++ L + +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNKQKSQSMIIRNLDLLHKLKIPNHLTFDSTQLQGLVSQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|12330480|gb|AAG52777.1| ribosomal protein 4 [Aplodon wormskioldii] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V+I SY Sbjct: 57 VRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQTIISKNIEFYQKYKIPNHLTFNSLQKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576653|gb|AAF63939.1| ribosomal protein system 4 [Prionodon densus] Length = 189 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNIIFRFGMASTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQPKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|49182696|gb|AAT57810.1| small ribosomal protein [Cyclolejeunea convexistipa] Length = 192 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+G K L K S + ++L KQK++ +YG ++E Sbjct: 1 RVKVIRRLGSLPGLTRKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTE 53 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ TI ARQ VNHRH+ +N Sbjct: 54 RQLLKFVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHRHIFINDYI 113 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDLTQLRGLVNQTIRR- 172 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 --EWIDLKINELLVVEYYSR 190 >gi|74273163|gb|ABA01281.1| ribosomal protein S4 [Passiflora trisecta] Length = 183 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + +S + +P++++ + +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSSDSFPQEKLPKHLTFHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|63191865|gb|AAY34892.1| small ribosomal protein subunit 4 [Tetrapterum recurvirostre] Length = 191 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + +++ +P +++ N +I Sbjct: 117 SYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---SDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|328488158|gb|AEB19892.1| small ribosomal protein 4 [Pachyschistochila colensoana] Length = 191 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P ++ + + + + Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNINLLQKLKIPNHLIFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|118577571|gb|ABL07151.1| small ribosomal protein 4 [Piper divaricatum] Length = 187 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P RS G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRP---RSEGS-LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYR Sbjct: 56 RIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I + + + V + A R ++P++++++ +I S + Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|37992581|gb|AAR06469.1| small ribosomal protein 4 [Leskeodon auratus] Length = 194 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G L G + +S +K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGV-LPGLTNKILQLKSNSINQSASNKK--ISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63191821|gb|AAY34870.1| small ribosomal protein subunit 4 [Crossidium crassinerve] Length = 194 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|49182760|gb|AAT57842.1| small ribosomal protein [Metzgeria sp. Davis 361] Length = 195 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 8/198 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKIFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I +K + + ++E ++ +P +++ + M+ + +I Sbjct: 117 VDIPSYNCKPGDIITIKNQKIYRSIIMETLNSIQKPGIPNHLAFDSTKMIGSVNQIIHR- 175 Query: 187 KDVPYPVIMQPNLVVEFY 204 + + LVVE+Y Sbjct: 176 --EWIDLKINELLVVEYY 191 >gi|42718082|gb|AAS38463.1| rps4 [Tayloria acuminata] Length = 189 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|42556392|gb|AAS19791.1| small ribosomal protein 4 [Austrolejeunea nudipes] Length = 188 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K L K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTSKISKTK------LDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ TI ARQ VNH+H+ +N VNI Sbjct: 54 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFSLGMATTIPNARQLVNHKHIFINNYIVNIP 113 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 SYNCKPGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDSTQLRGLINQTIRR---EW 170 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 171 IDLKINELLVVEYYSR 186 >gi|63100985|gb|AAY33117.1| small ribosomal protein 4 [Foreauella orthothecia] Length = 192 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G ++P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNRTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKDQQKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|153805598|ref|YP_001382179.1| ribosomal protein S4 [Leptosira terrestris] gi|171704565|sp|A6YGA2|RR4_LEPTE RecName: Full=30S ribosomal protein S4, chloroplastic gi|134270129|gb|ABO69318.1| ribosomal protein S4 [Leptosira terrestris] Length = 221 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 23/224 (10%) Query: 1 MSKRESSKHKIDRR--IGENLWGRPKSPVNTRSYGPGLHGQRRKSKP---------SYFG 49 MS+ ++ +I R+ + + L G + + R PG H ++R + + Sbjct: 1 MSRYRGARLRIVRQFDLKQTLRGLTRKRTDNRCM-PGQHRKKRNDSTKKTKNSKKVAQYQ 59 Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++L+ KQK++ YG I+E + + ++A +++G T L+ LE RLD IV+R PTI Sbjct: 60 IRLQEKQKLRFNYG-ITESQLINYVRQARKTKGSTGETLLQLLEMRLDNIVFRLGMAPTI 118 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-------ER 162 AARQ VNH H++VN + V+I SY+C+ DVI V + + Sbjct: 119 PAARQLVNHGHIVVNNKKVDISSYQCQSQDVISVTKNKTIRTLISNFINSKTPKNLLRNP 178 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++ N ++ T + + ++ L+VEFYSR Sbjct: 179 QIPSHLIFNKSTLLGTIKSVVPRR---WIGLKIKELLIVEFYSR 219 >gi|42718080|gb|AAS38462.1| rps4 [Tayloria kilimandscharica] Length = 189 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|42556474|gb|AAS19832.1| small ribosomal protein 4 [Pallavicinia sp. He-Nygren 1407] Length = 191 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G L G + +RS K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGA-LPGLSHKMLGSRSGYTNQ--LTTGKKISQYRIRLEEKQKLRFHYG-LTERQLV 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RLD IV+R PTI +ARQ VNHRH+L+N +VNI Sbjct: 57 KYVRIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPSARQLVNHRHILINANTVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK D+I +K + + + + + L+ E+ +P +++ + + RI Sbjct: 117 SYNCKTKDIITIKNRHESQSLITKNINLSREQRIPNHLTFDSTRFCGSVNRITDR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|157689570|gb|ABV65341.1| ribosomal protein S4 [Tapiscia sinensis] Length = 186 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRP----RAGSDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K + K A + + ++P+++ ++ +I + Sbjct: 116 KPRDIITAKDEQKSRALIKNYLDSSTHEELPKHLILHTFQYKGLVNQIIDRK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|42718078|gb|AAS38461.1| rps4 [Tayloria scabriseta] Length = 189 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRVKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|33413215|emb|CAD86742.1| ribosomal protein small subunit 4 [Ditrichum pusillum] Length = 190 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N R VNI S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 117 YRCKPQDFITIKDRQKSRAMISKNVDFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|32892080|gb|AAP88979.1| ribosomal protein S4 [Passiflora foetida] gi|32892084|gb|AAP88981.1| ribosomal protein S4 [Passiflora speciosa] gi|32892118|gb|AAP88998.1| ribosomal protein S4 [Passiflora recurva] gi|32892140|gb|AAP89009.1| ribosomal protein S4 [Passiflora maliformis] gi|74273153|gb|ABA01276.1| ribosomal protein S4 [Passiflora coccinea] gi|74273155|gb|ABA01277.1| ribosomal protein S4 [Passiflora vitifolia] gi|74273159|gb|ABA01279.1| ribosomal protein S4 [Passiflora palmeri] gi|74273161|gb|ABA01280.1| ribosomal protein S4 [Passiflora antioquiensis] gi|74273165|gb|ABA01282.1| ribosomal protein S4 [Passiflora manicata] gi|74273171|gb|ABA01285.1| ribosomal protein S4 [Passiflora ambigua] gi|74273189|gb|ABA01294.1| ribosomal protein S4 [Passiflora riparia] gi|74273193|gb|ABA01296.1| ribosomal protein S4 [Passiflora serratodigitata] gi|74273197|gb|ABA01298.1| ribosomal protein S4 [Passiflora trintae] gi|74273211|gb|ABA01305.1| ribosomal protein S4 [Passiflora mixta] gi|74273213|gb|ABA01306.1| ribosomal protein S4 [Passiflora tripartita] gi|74273215|gb|ABA01307.1| ribosomal protein S4 [Passiflora trifoliata] gi|74273217|gb|ABA01308.1| ribosomal protein S4 [Passiflora luetzelburgii] gi|89031436|gb|ABD59455.1| Rps4 [Passiflora incarnata] gi|89031438|gb|ABD59456.1| Rps4 [Passiflora cincinnata x Passiflora incarnata] gi|89031440|gb|ABD59457.1| Rps4 [Passiflora cincinnata] gi|89031442|gb|ABD59458.1| Rps4 [Passiflora foetida x Passiflora palmeri] gi|89031444|gb|ABD59459.1| Rps4 [Passiflora foetida] gi|91795201|gb|ABE60881.1| ribosomal protein S4 [Passiflora hatschbachii] Length = 183 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|15145850|gb|AAK83543.1| rps4 [Tayloria solitaria] Length = 189 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFINIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|146261589|gb|ABQ15104.1| ribosomal protein S4 [Saxifraga stolonifera] Length = 186 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K DVI K + K + + + +VP+Y++++ +I + + Sbjct: 116 KSRDVITAKDEQKSRTLIQNSLDSSPHEEVPKYLTLHPLQYKGLVNQIIDNK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|254383598|ref|ZP_04998948.1| 30S ribosomal protein S4 [Streptomyces sp. Mg1] gi|194342493|gb|EDX23459.1| 30S ribosomal protein S4 [Streptomyces sp. Mg1] Length = 203 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Y IS Sbjct: 6 PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRAQYD-IS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H+ VNG Sbjct: 64 ERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGHIEVNGD 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183 V+ S+R + DVI V+++S++ A + E + P Y+ VN + R P Sbjct: 124 KVDKPSFRVRPDDVITVRERSREKVPFQVAREGGYAGEGETPRYLQVNLKALAFRLDRDP 183 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + PVI LVVE+Y+R Sbjct: 184 NRKE---IPVICDEQLVVEYYAR 203 >gi|15145848|gb|AAK83542.1| rps4 [Tayloria rudolphiana] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|74273103|gb|ABA01251.1| ribosomal protein S4 [Passiflora ceratocarpa] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K GD+I VK + K + + ++ +P++++++ + +I S + Sbjct: 113 KPGDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLHRSQYKGSVNKIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|78102703|gb|ABB21565.1| small ribosomal protein 4 [Plagiochila oresitropha] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ N + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|293633973|gb|ADE60366.1| ribosomal protein subunit 4 [Atrichum flavisetum] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQEFQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LEINELLVVEYYSR 187 >gi|291302390|ref|YP_003513668.1| 30S ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728] gi|290571610|gb|ADD44575.1| ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728] Length = 203 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 9/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K K R +G L + R + PG HG+RR+S+ Y +L KQ++++ Sbjct: 1 MNRPR-PKAKRSRALGIALTPKCVKYFERRPFPPGQHGRRRRSESDYSR-RLLEKQRLRE 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +I E + + F EA R G T NL+S LE RLD V RA F TI+ +RQ V HRH Sbjct: 59 QY-NIREAQMKRAFAEAVRRDGKTGDNLVSLLERRLDAFVLRAGFARTIYQSRQQVVHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVA 177 LVNGR V+ SYR K GDV++V S+ + +P Y+ + A Sbjct: 118 FLVNGRRVDKPSYRLKPGDVVQVAPGSRDKTPFQLAAAGAWAGSGPLPGYLEAKLPELKA 177 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P + PV+ LVVEFYSR Sbjct: 178 RLIAEPPRAQ---VPVVCDEQLVVEFYSR 203 >gi|254525444|ref|ZP_05137496.1| ribosomal protein S4 [Prochlorococcus marinus str. MIT 9202] gi|221536868|gb|EEE39321.1| ribosomal protein S4 [Prochlorococcus marinus str. MIT 9202] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +GE K+ +S PG HGQ R+ + Y ++L KQK++ YG +SEK+ Sbjct: 1 MGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRFNYG-VSEKQLVRYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 K+A G T NL+ LE+RLD + +R F TI +RQ VNH HV VNG+ ++I Y+ Sbjct: 57 KKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGHVTVNGKVLDIAGYQ 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GDVI +K+ V + +VP ++ ++ + + Sbjct: 117 CKSGDVIGIKENKASKKLVEGNIEFPGLANVPPHLDLDKPKLTGKIN---GKCDREWVAL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 EINELLVVEYYSR 186 >gi|32401820|gb|AAP80898.1| small ribosomal protein 4 [Eucalyptus globulus] Length = 184 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + K A + + +VP++++++ +I S + + Sbjct: 116 RDIITARDDQKSRAMIQNYFDSSPPEEVPKHLTLHPFQYKGLVNQIIDSK---WIGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|49182714|gb|AAT57819.1| small ribosomal protein [Haplomitrium gibbsiae] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + G K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGSLPGLTNKAP---KPRPGGTDQSIANKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+L+N ++V+I S Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVISRLGMAPTIPGARQLVNHRHILLNDKTVDIPSC 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 C+ GD+I V+ ++ + E + ++R P +++++ + +I Sbjct: 117 NCEPGDIITVRDRAGSRPVIAEGTDPSQRSRTPNHLNLDSARNMGFVNQIIDR---EWIS 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37548827|gb|AAO32682.1| ribosomal protein 4 [Buxbaumia aphylla] Length = 193 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P Y + K S + ++L KQK++ +YG I+E++ Sbjct: 3 IRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++G T + E RLD I++R PTI ARQ VNHRH+LVN VNI Sbjct: 59 KYVRIARGAKGSTGQISLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNNIVNIP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K K + + +L+++ +P +++ N +I L Sbjct: 119 SYRCKPQDFITIKNSQKSQTIITKNIELSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 175 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 IGLKINELLVVEYYSR 191 >gi|67035931|gb|AAY62892.1| small ribosomal protein subunit 4 [Mesonodon flavescens] Length = 194 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+L+N V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILINDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|157689524|gb|ABV65318.1| ribosomal protein S4 [Myrtus communis] Length = 185 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 56 AGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + K + + ++P++++++ +I S + + Sbjct: 116 PRDIITARDDQKSRTMIQNFLDSSPHEEMPKHLTLHPFQYKGLVNQIIDSK---WIGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|49182785|gb|AAT57854.1| small ribosomal protein [Ptilidium ciliare] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K SY + K S++ ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTGKILKPKSSY---IDRSTSNKKVSHYRIRLEEKQKLRFHYG-LTERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N +VNI SY Sbjct: 57 CIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVNIPSYN 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GD+I ++ + K + + L ++ +P +++ + + + ++ + Sbjct: 117 CKPGDMITIRNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSVNQMIHR---EWIHL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|50235334|gb|AAT70700.1| Rps4 [Lescuraea mutabilis] Length = 195 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + + RR+G ++P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRXIRRLGTLPGLTNRTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67035724|gb|AAY62793.1| small ribosomal protein subunit 4 [Luisierella barbula] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLSGLTTKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK D I +K + K A + + ++ ++ +P +++ N +I L Sbjct: 117 YCCKTQDFITIKNRQKSQAIINKNIEIYQKYKLPNHLTFNSLQKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|67035843|gb|AAY62848.1| small ribosomal protein subunit 4 [Donnellia commutata] Length = 194 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGXILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|32892136|gb|AAP89007.1| ribosomal protein S4 [Passiflora gabrielliana] gi|91795199|gb|ABE60880.1| ribosomal protein S4 [Passiflora cerasina] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSTF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|3098244|gb|AAC15570.1| small ribosomal protein 4 [Hymenodontopsis vallis-gratiae] gi|47606940|gb|AAT36390.1| ribosomal protein subunit 4 [Hymenodontopsis vallis-gratiae] Length = 195 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKIPQLRSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + K A + + ++ +P +++ ++ +I Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYSYLEKKGFVNQILDRK 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---SIGLKINELLVVEYYSR 193 >gi|325261520|ref|ZP_08128258.1| ribosomal protein S4 [Clostridium sp. D5] gi|324032974|gb|EGB94251.1| ribosomal protein S4 [Clostridium sp. D5] Length = 197 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + + + R +R K S +GLQLR KQK K Sbjct: 1 MAVNRVAVLKRCRSLGMDPIYLGINKKSNRQL------KRSNRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A + G T NL+ LESRLD +++R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKAKKMEGMTGENLMILLESRLDNVMFRMGLARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 V+VNG+ VNI SY K GD IE+K+K K + ++ + +P+++ V+ +N+ AT Sbjct: 114 VMVNGKQVNIPSYLVKAGDTIEIKEKHKGSQRYKDILEMTGGNMIPDWLEVDAENLKATV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPAR---EAIDVPVDEMLIVELYSK 197 >gi|12330464|gb|AAG52769.1| ribosomal protein 4 [Polytrichastrum pallidisetum] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG +E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGY---INQAVSNKKISXYRIRLEEKQKLRFHYGX-TERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD ++R PTI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNXIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|3098206|gb|AAC15551.1| small ribosomal protein 4 [Amblyodon dealbatus] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P T S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLTSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|63191837|gb|AAY34878.1| small ribosomal protein subunit 4 [Leptodontium luteum] Length = 191 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P + + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I + + K + + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDCITINDRQKSQSIITKNIDFSQKSKIPHHLAFNSLEKKGLINQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|7576547|gb|AAF63886.1| ribosomal protein system 4 [Anomodon rugelii] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQSLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|293634123|gb|ADE60441.1| ribosomal protein subunit 4 [Polytrichum hyperboreum] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|11121335|emb|CAC14831.1| ribosomal protein subunit 4 [Racopilum tomentosum] Length = 192 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKDRQKSQAITSKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIDLKINELLVVEYYSR 190 >gi|67036062|gb|AAY62957.1| small ribosomal protein subunit 4 [Plagiothecium cavifolium] Length = 192 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L LE R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLSQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|63191728|gb|AAY34824.1| small ribosomal protein subunit 4 [Plagiopus oederi] Length = 192 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRMVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 SIGLKTNELLVVEYYSR 190 >gi|63191771|gb|AAY34845.1| small ribosomal protein subunit 4 [Meiotrichum lyallii] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|7576549|gb|AAF63887.1| ribosomal protein system 4 [Thelia lescurii] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETVISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|184127935|gb|ACC67867.1| ribosomal protein small subunit 4 [Christensenia aesculifolia] Length = 200 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ + K+ + ++ Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLRIIRRLKDLPGLTNKTLRSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PT AARQ VNHRH+LVN R Sbjct: 58 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTTPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISV----NHDNMVATFVRI 182 VNI SYRCK D+I V+ ++ V + + +D +PE++++ +++ RI Sbjct: 118 VNIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLDDNEKPQGFVNRI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 VTRD---SIGLNINELLVVEYYSR 198 >gi|37992565|gb|AAR06461.1| small ribosomal protein 4 [Camptochaete arbuscula] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---IXXSXSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|32892090|gb|AAP88984.1| ribosomal protein S4 [Passiflora setacea] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEPKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|12330536|gb|AAG52805.1| ribosomal protein 4 [Leptobryum wilsonii] gi|42718116|gb|AAS38480.1| rps4 [Leptobryum wilsonii] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFIIIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|283549372|dbj|BAI66348.1| small ribosomal protein 4 [Eocalypogeia quelpartensis] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKPKSSY---IERSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A + +G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRTARKVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNNI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I VK K K +V + L ++ +P +++ + + + + Sbjct: 117 VDIPSYHCKPGDIITVKNKQKSRLTVTKNISLFQKLKIPSHLTFDSTELRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWIDLKINELLVV 188 >gi|302533389|ref|ZP_07285731.1| ribosomal protein S4 [Streptomyces sp. C] gi|302442284|gb|EFL14100.1| ribosomal protein S4 [Streptomyces sp. C] Length = 203 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Y IS Sbjct: 6 PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRAQYD-IS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A ++ G T L+ LE RLD +V RA TI+ ARQ V H H+ VNG Sbjct: 64 ERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRAGIARTIYQARQMVVHGHIEVNGG 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183 V+ S+R + DVI V+++S++ A + E + P Y+ VN + R P Sbjct: 124 KVDKPSFRVRPDDVITVRERSREKHPFQVAREGGYAGEGETPRYLQVNLKALAFRLDRDP 183 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + PVI LVVE+Y+R Sbjct: 184 NRKE---IPVICDEQLVVEYYAR 203 >gi|257067034|ref|YP_003153290.1| 30S ribosomal protein S4 [Anaerococcus prevotii DSM 20548] gi|256798914|gb|ACV29569.1| ribosomal protein S4 [Anaerococcus prevotii DSM 20548] Length = 197 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + +K R +G + + + R+ R+SK S +G+Q R KQK K Sbjct: 1 MAVSKDPVYKKARALGISPAYLGYTGESKRALP------NRRSKLSEYGMQQREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FR ++ A + +G T LI E RLD I +R+ T ARQ V H H Sbjct: 55 IYG-VSEKQFRGYYEAASKMKGQTGEQLIILCERRLDNIAFRSGLARTRREARQIVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 + VNG+ V+I SY+ EGDVIEV++KS+ + A V E++S + +N+ T Sbjct: 114 LTVNGKQVDIPSYKVSEGDVIEVREKSRSNTLFKTIKETNATFGVVEWLSSDLENLKVTV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ +D+ PV + ++VEFYS+ Sbjct: 174 DRFPTR-EDIDIPV--EERMIVEFYSK 197 >gi|7576627|gb|AAF63926.1| ribosomal protein system 4 [Pseudocryphaea domingensis] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|293634025|gb|ADE60392.1| ribosomal protein subunit 4 [Pogonatum aloides] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDNIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 C D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 CXPXDFITIKNRQESQAIIAKNIDFSQKXKIPNHLTFNSLEKKGLVNQI---LDRESISL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|293634087|gb|ADE60423.1| ribosomal protein subunit 4 [Polytrichastrum longisetum] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|302541108|ref|ZP_07293450.1| ribosomal protein S4 [Streptomyces hygroscopicus ATCC 53653] gi|302458726|gb|EFL21819.1| ribosomal protein S4 [Streptomyces himastatinicus ATCC 53653] Length = 203 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K R +G L + R Y PG HG+ RK + S + ++L KQ+++ Y IS Sbjct: 6 PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRK-QTSDYKVRLLEKQRLRAQYD-IS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A + G T LI LE RLD +V R+ TI+ ARQ V H H+ VNGR Sbjct: 64 ERQMARAYDRARKVDGKTGEALIIELERRLDALVLRSGIARTIYQARQMVVHGHIEVNGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183 V+ S+R + DV+ V+++S++ A + + + P Y+ VN + R P Sbjct: 124 KVDKPSFRVRPDDVVMVRERSREKHPFQVAREGGYAPDGETPRYLQVNLKALAFRLDRDP 183 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + PVI LVVE+Y+R Sbjct: 184 NRKE---VPVICDEQLVVEYYAR 203 >gi|32892102|gb|AAP88990.1| ribosomal protein S4 [Passiflora cincinnata] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|11121111|emb|CAC14742.1| ribosomal protein subunit 4 [Bescherellia brevifolia] Length = 191 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIA 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|50235370|gb|AAT70718.1| Rps4 [Brachythecium dieckei] Length = 195 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR G K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRXGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|74273157|gb|ABA01278.1| ribosomal protein S4 [Passiflora clathrata] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPLQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|78102675|gb|ABB21551.1| small ribosomal protein 4 [Plagiochila javanica] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I + K K A V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINEXLVVE 189 >gi|37992477|gb|AAR06417.1| small ribosomal protein 4 [Cyathophorella hookeriana] Length = 194 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + + + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRESETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|328488184|gb|AEB19905.1| small ribosomal protein 4 [Schistochila ciliata] Length = 191 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMTTTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIITIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|74273187|gb|ABA01293.1| ribosomal protein S4 [Passiflora odontophylla] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTNKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVC 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|42405298|gb|AAS13475.1| rps4 small ribosomal protein [Dichelodontium nitidum] Length = 195 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D I++R TI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLLEMRSDNILFRLGMASTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I +K + + + ++ +P +++ + +I L Sbjct: 117 VNIPSYRCKPQDFIIIKDEKNSEGVINKKEDFYQKYKIPNHLTYSFLEKKGLVNKI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|7576519|gb|AAF63872.1| ribosomal protein system 4 [Thamnobryum allegrense] gi|7576521|gb|AAF63873.1| ribosomal protein system 4 [Neckeropsis disticha] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ E R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|227345133|gb|ACP28119.1| small ribosomal protein 4 [Clasmatocolea ctenophylla] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGALPGLTNKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY Sbjct: 57 MRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 C+ GD+I ++ K K + + + L ++ ++P ++ + + + ++ + Sbjct: 117 NCEPGDIIAIRNKHKSRSIITKNINLFQKLEIPSHLIFDSIKLRGSVNQMINR---EWIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|3098156|gb|AAC15526.1| small ribosomal protein 4 [Blindia acuta] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I E+ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IXERXLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D +K + K A V++ +++ VP +++ N +I L Sbjct: 117 RCKPQDFFTIKDRQKSQAMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|317501800|ref|ZP_07959986.1| ribosomal protein S4 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088679|ref|ZP_08337589.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 3_1_46FAA] gi|316896833|gb|EFV18918.1| ribosomal protein S4 [Lachnospiraceae bacterium 8_1_57FAA] gi|330407202|gb|EGG86705.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 3_1_46FAA] Length = 197 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + +N +S R+ S+ +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPIYLG---INKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ + +A + G T NL+ LESRLD +++R T ARQ V+H+H Sbjct: 55 IYGVL-EKPFRNYYAKAKQMEGMTGENLMRILESRLDNVIFRMGLARTRKEARQIVDHKH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 VLVNG+ VNI SY K GD IE+K+ K + + + VPE++ V+ +N+ + Sbjct: 114 VLVNGKQVNIPSYLVKAGDTIEIKENKKGSQRYKDILEATGSNMVPEWLDVDAENLKGSV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ V + L+VE YS+ Sbjct: 174 KELPAR---EAIDVPVDEMLIVELYSK 197 >gi|74273177|gb|ABA01288.1| ribosomal protein S4 [Passiflora ischnoclada] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQKKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|293634077|gb|ADE60418.1| ribosomal protein subunit 4 [Polytrichastrum alpinum] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|17025849|gb|AAL32090.1| ribosomal protein 4 [Mitthyridium sp. Wall 3685] Length = 199 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + ++ K S + ++L KQK++ +YG ++E Sbjct: 5 RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 60 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 +K + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 61 RKLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNM 120 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY+CK D I +K + K +++ ++ + + P +++ N +I L Sbjct: 121 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNFVEKKGLVNQI---L 177 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 DQESIGLKINELLVVEYYSR 197 >gi|184127943|gb|ACC67871.1| ribosomal protein small subunit 4 [Marattia laevis] Length = 199 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ + K+ + ++ Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMSPTIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183 V+I SYRCK D+I V+ + V + + +D +PE+++++ + RI Sbjct: 118 VDIPSYRCKPKDIISVRDQPNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197 >gi|157689578|gb|ABV65345.1| ribosomal protein S4 [Tropaeolum majus] Length = 186 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKKP----RVGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ +NHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLINHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I V+ + K A + A ++P++++++ +I + Sbjct: 116 KSRDIITVRNEQKSRALIQNFLDSSAHEELPKHLTLHTFQYEGLVNQIIDRK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|12642250|gb|AAK00207.1| rps4 [Ephemerum spinulosum] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKTPHVKSNS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDCITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|12330506|gb|AAG52790.1| ribosomal protein 4 [Drummondia prorepens] Length = 189 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|78369607|gb|ABB43033.1| ribosomal protein 4 [Syrrhopodon parasiticus] Length = 192 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDV 189 SY+CK D I +K + K +++ + ++ P ++ N +I L Sbjct: 117 PSYQCKPQDFITIKDQQKYQTMIIKNTTFFSKHKTPNHLIFNSVEKKGFVNQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|307828379|gb|ADN94988.1| small ribosomal protein 4 [Fossombronia truncata] Length = 190 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI S Sbjct: 57 YVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK GDVI V+ + K + + + L ++ P +++++ + + + Sbjct: 117 YSCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NLKINELLVVEYYSR 188 >gi|42794716|gb|AAS45753.1| Rps4 [Thibaudia floribunda] Length = 211 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFGKKKKXQXH--IRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG +++++ + +++G L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTDRQLLKYVRIXGKAKGSPGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|32892100|gb|AAP88989.1| ribosomal protein S4 [Passiflora actinia] Length = 183 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-VTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|37992621|gb|AAR06489.1| small ribosomal protein 4 [Papillaria imponderosa] gi|37992633|gb|AAR06495.1| small ribosomal protein 4 [Papillaria nigrescens] Length = 190 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|32892142|gb|AAP89010.1| ribosomal protein S4 [Passiflora quadrangularis] Length = 183 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIAKSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ +E RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLIEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSFDSFSQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|29422391|gb|AAO84591.1| small ribosomal protein 4 [Breutelia arundinifolia] Length = 190 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGAXPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 RCKPXDFITIKDRXKSQXIISKNIDFYQKYXIPNHLTYNSXENKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|86438898|emb|CAJ55424.1| small ribosomal protein 4 [Plagiochila hookeriana] Length = 187 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++ Sbjct: 1 PRIKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 ERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINND 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + ++ + Sbjct: 117 IVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR 176 Query: 186 LKDVPYPVIMQPNL 199 + + L Sbjct: 177 ---EWINLKINELL 187 >gi|78102669|gb|ABB21548.1| small ribosomal protein 4 [Plagiochila gymnoclada] Length = 189 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + L ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNINLFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|49182704|gb|AAT57814.1| small ribosomal protein [Fossombronia pusilla] Length = 194 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 4 IRRLGVLPGLTDRIVEPRSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI Sbjct: 60 KYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GDVI V+ + K + + ++ L ++ P +++++ + + + Sbjct: 120 SYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDLTRLRGSINQTIDRD---W 176 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 IDLKINELLVVEYYSR 192 >gi|32401826|gb|AAP80901.1| small ribosomal protein 4 [Cornus kousa] Length = 184 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + K A + + + + ++P++++V+ +I S + + Sbjct: 116 QDIITARDEQKSRALIQNSLESSPHEELPKHLTVHPFQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|297155790|gb|ADI05502.1| 30S ribosomal protein S4 [Streptomyces bingchenggensis BCW-1] Length = 204 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 8/209 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + TR Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFETRPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y ISE++ + A ++ G T L+ LE RLD +V R+ TI+ ARQ V H H Sbjct: 60 QYD-ISERQMARAYDRARKAEGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 + VNGR V+ S+R + DV+ V+++S+ A + + + P Y+ VN + Sbjct: 119 IEVNGRKVDKPSFRVRPDDVVMVRERSRDKHPFQVAREGGYALDGETPRYLQVNLLALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + PVI LVVE+Y+R Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204 >gi|160415786|gb|ABX39200.1| small ribosomal protein 4 [Dryptodon decipiens] Length = 188 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|7576537|gb|AAF63881.1| ribosomal protein system 4 [Myurium hochstetteri] Length = 189 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|118577540|gb|ABL07136.1| small ribosomal protein 4 [Peperomia dolabriformis] Length = 183 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K PV+ S L Q R K S + ++L KQK++ +YG + E++ + A Sbjct: 1 PGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNG V+I SYRCK Sbjct: 56 KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + K V + A R ++P++++++ +I + + + Sbjct: 116 DIITTRNAQKSKILVQNSMDSASREELPKHLTLDSSQYKGIVNQIIDNK---WVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|32892108|gb|AAP88993.1| ribosomal protein S4 [Passiflora elegans] Length = 183 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSTF-------SRSGKKSQYCIRLEEKQKLRFHYG-VTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|293634071|gb|ADE60415.1| ribosomal protein subunit 4 [Polytrichadelphus purpureus] Length = 188 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 7/192 (3%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y +K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGYINQQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 57 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 58 IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRC 117 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A ++ +++ +P +++ N +I L + Sbjct: 118 KPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 174 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 INELLVVEYYSR 186 >gi|50235364|gb|AAT70715.1| Rps4 [Brachytheciastrum fendleri] Length = 190 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|50235358|gb|AAT70712.1| Rps4 [Scleropodium cespitans] Length = 195 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLXTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42794724|gb|AAS45757.1| Rps4 [Thibaudia martiniana] Length = 211 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++ Q KQK + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFVKKXXXXXXXXXQ--EKQKWRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E + + +++G T L+ LE RLD I++R TI ARQ VNH H Sbjct: 59 PYG-LTEPQLLKYVRXPXKAKGSTGQVLLQLLERRLDNILFRWGMASTIPGARQLVNHSH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ L L + + + VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIIXAREKSRALIQNSFQNLFDLPSXKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|33413223|emb|CAD86747.1| ribosomal protein small subunit 4 [Dicranoweisia crispula] Length = 188 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + +++ VP +++ N +I L + Sbjct: 117 CKPQDFITIKNRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|67035646|gb|AAY62754.1| small ribosomal protein subunit 4 [Aulacopilum hodgkinsoniae] Length = 191 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R TI ARQ VNH+H+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVNHKHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I +K + K +L+ +++ VP +++ N +I L Sbjct: 117 SYRCKPQDLITIKNRQKSQGIILKNVDFSQKFKVPNHLTFNSLEKKGIVNQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|63191825|gb|AAY34872.1| small ribosomal protein subunit 4 [Stegonia latifolia] Length = 194 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|118577550|gb|ABL07141.1| small ribosomal protein 4 [Peperomia quadrifolia] Length = 183 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K PV+ S L Q R K S + ++L KQK++ +YG + E++ + A Sbjct: 1 PGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 56 KAKGSTGQVLLQILEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + K V + A R ++P++++++ +I + + Sbjct: 116 DIITTRNAQKSKVLVQNSIDSASREELPKHLTLDSSQYKGIVNQIIDGK---WVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|157689408|gb|ABV65260.1| ribosomal protein S4 [Albizia julibrissin] Length = 187 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 10/193 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAKQKMKKYYGDISEKKFRSIF 74 G K P+ G L Q R + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTSKKPI----VGSELRNQARLDNKKSQYCIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYR Sbjct: 56 GIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHVLVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I + + K + + R ++P++++++ +I S + Sbjct: 116 CKPQDIITARDEQKSRTLIQNYLDSSPREELPKHLTLHPFQYKGLVNQIIDSK---WVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|50235362|gb|AAT70714.1| Rps4 [Brachytheciastrum collinum] Length = 195 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ K+P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLXTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|118626061|emb|CAL41751.1| small ribosomal protein 4 [Pachyschistochila carnosa] Length = 191 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G + K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSHPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T + LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVSLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY + GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNRELGDIIAIKNKKKSQSVITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|32892106|gb|AAP88992.1| ribosomal protein S4 [Passiflora edulis] Length = 183 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLHSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|15145852|gb|AAK83544.1| rps4 [Tayloria froelichiana] Length = 189 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|78102671|gb|ABB21549.1| small ribosomal protein 4 [Plagiochila hirta] Length = 189 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCELGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|118577587|gb|ABL07159.1| small ribosomal protein 4 [Piper kadsura] gi|118577619|gb|ABL07175.1| small ribosomal protein 4 [Piper ribesioides] Length = 185 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P + S L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 AGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|37992603|gb|AAR06480.1| small ribosomal protein 4 [Meteoriopsis reclinata] gi|37992607|gb|AAR06482.1| small ribosomal protein 4 [Neodicladiella pendula] Length = 190 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|32892144|gb|AAP89011.1| ribosomal protein S4 [Passiflora alata] Length = 183 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSFDSFSQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|37992599|gb|AAR06478.1| small ribosomal protein 4 [Meteorium buchananii] Length = 190 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|33411996|emb|CAD86744.1| ribosomal protein small subunit 4 [Amphidium lapponicum] Length = 187 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A +++ +++ +P ++S N +I L + Sbjct: 117 KPQDFITIKDRQKSQAMIIKNVDFSQKSKIPNHLSFNSLEKKGLVNKI---LDQESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|328488172|gb|AEB19899.1| small ribosomal protein 4 [Perssoniella vitreocincta] Length = 191 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K K K + + L ++ +P +++ N + + + Sbjct: 117 SYNCKLGDIIAIKNKQKSQSMITRNLNLLQKFKIPNHLTFNSTQLRGLVNQ---RIHREF 173 Query: 191 YPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INFKINELLVVEYYSR 189 >gi|75858246|gb|ABA28697.1| small ribosomal protein 4 [Treubia lacunosa] Length = 191 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + Y ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGVLPGLTNKTLKSKLGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A +++G T L+ LE RLD I++R TI ARQ VNHRH+L+N ++V+I Sbjct: 57 KYVGIARKAKGSTGEVLLQLLEMRLDNIIFRLGLAFTIPGARQLVNHRHILINNKTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK D+I +K K + + + + +P +++ + + +I Sbjct: 117 SYHCKPKDLITIKNKPTSQLLITKNIDYSTKYKIPNHLTFDSVKKIGLVNQIIDR---EF 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|160415796|gb|ABX39205.1| small ribosomal protein 4 [Jaffueliobryum raui] gi|160415798|gb|ABX39206.1| small ribosomal protein 4 [Jaffueliobryum wrightii] gi|322719583|gb|ADX07728.1| small ribosomal protein subunit 4 [Jaffueliobryum wrightii] Length = 188 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A V++ +++D VP +++ N +I L + Sbjct: 117 CKPQDFITIKARQKSQAMVIKNVDFSQKDKVPNHLTFNSLEKKGLVNQI---LDHGSIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|47606906|gb|AAT36373.1| ribosomal protein subunit 4 [Hymenodon sphaerothecius] Length = 195 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+ + ++ K S + ++L KQK++ YYG I+E Sbjct: 1 RVRIIRRLGTLSGLTNKTSQLKANS---INQLTSNKKISQYRIRLEEKQKLRFYYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K V + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKNRRKSQTIVNKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESISLKINELLVVEYYSR 193 >gi|37992697|gb|AAR06527.1| small ribosomal protein 4 [Tetrastichium fontanum] Length = 194 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKLIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKLKIPNHLTYSFLEKKGLINQI---LH 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|88608362|ref|YP_506463.1| ribosomal protein S4 [Neorickettsia sennetsu str. Miyayama] gi|123491757|sp|Q2GDI3|RS4_NEOSM RecName: Full=30S ribosomal protein S4 gi|88600531|gb|ABD45999.1| ribosomal protein S4 [Neorickettsia sennetsu str. Miyayama] Length = 205 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 131/205 (63%), Gaps = 3/205 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K ++ R++ +LWG K PV+ R+Y PG HG+ K S F Q A++ + Sbjct: 1 MTTTIRRKFRVSRQMKASLWGSQKDPVHKRNYAPGQHGRAPVKKISDFYKQNAAQRAFR- 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y I +K+F ++F +A R +G+T+ NLIS LESR+ +++YR+ VPTIFAARQ ++H+H Sbjct: 60 TYYVIGKKQFANVFSKAYRGKGNTNDNLISLLESRVSSVLYRSGMVPTIFAARQLISHKH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNI S+ KEGDV++++ ++ + V+ A + + P Y+ V+ + + Sbjct: 120 VTVNGEIVNICSFTLKEGDVVQIRDRASNIPCVVAALN-SNSESPHYLEVDREKRSVKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 +P +DVPYPV+M+PNLV E++S Sbjct: 179 VLP-KFEDVPYPVVMEPNLVTEYFS 202 >gi|283549380|dbj|BAI66352.1| small ribosomal protein 4 [Jungermannia subulata] Length = 188 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I VK K K + + + L ++ +P +++ + + + + + Sbjct: 117 VDIPSYNCELGDIIAVKNKQKSQSIITKNINLFQKSKIPSHLTFDSAKLHGSVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWVHLKINELLVV 188 >gi|89031434|gb|ABD59454.1| Rps4 [Passiflora incarnata x Passiflora sprucei] Length = 183 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPXARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|42718094|gb|AAS38469.1| rps4 [Tetraplodon lamii] Length = 189 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITTKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37992685|gb|AAR06521.1| small ribosomal protein 4 [Squamidium macrocarpum] Length = 192 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 PSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|7576509|gb|AAF63867.1| ribosomal protein system 4 [Leucodon brachypus] Length = 189 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|78102721|gb|ABB21574.1| small ribosomal protein 4 [Plagiochila stephensoniana] Length = 189 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|328488186|gb|AEB19906.1| small ribosomal protein 4 [Schistochila doriae] Length = 191 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ YYG ++E++ Sbjct: 1 IRRLGSLPGLTNKILKPKSSY---IDRSTANKKLSQYRIRLEEKQKLRFYYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIRNKQKSQLIITRNLNLLQKLKIPNHLTFDSTQLQGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|160415802|gb|ABX39208.1| small ribosomal protein 4 [Codriophorus aquaticus] Length = 188 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPPLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|11878070|gb|AAG40783.1| small ribosomal protein 4 [Sphagnum palustre] Length = 186 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P + SY ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 VLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI SYRCK Sbjct: 57 ARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K A + + + P +++++ + +I + + Sbjct: 117 PQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|16565399|gb|AAL26214.1|AF313614_1 small ribosomal protein 4 [Chloranthus multistachys] Length = 190 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 9/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLKTLPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRFHYG-LTERQLL 55 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+LVN R V+I Sbjct: 56 RYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRHILVNSRIVDIP 115 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I + + + + + ++P++++++ +I S Sbjct: 116 SYRCKPRDIITTRDEQRSRTLIQNHIDSSPHEELPKHLTLHSFQYKGLVNQIIDSK---S 172 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 IGLKINELLVVEYYSR 188 >gi|37683556|gb|AAQ98829.1| small ribosomal protein 4 [Pogonatum nanum] Length = 189 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 2 LGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYR Sbjct: 58 RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDNIVNIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + + +++ +P +++ N +I L + Sbjct: 118 CKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESISL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|46486562|gb|AAS98717.1| ribosomal protein subunit 4 [Spiridens vieillardii] Length = 194 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P ++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLKYSSLEKKGFVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|78369611|gb|ABB43035.1| ribosomal protein 4 [Syrrhopodon japonicus] Length = 193 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K P S ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 KIIRRLGVLPGLTNKIPQLKSSS---INQAISNKKISQYRIRLEEKQKLRFHYG-LTERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNHR +LVN R VN Sbjct: 57 LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRQILVNNRIVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SY+CK D I +K + K +++ + + + +P +++ N ++ L Sbjct: 117 IPSYQCKLQDSITIKDEQKYQTMIVKNTNFSPKYKIPSHLTFNSVEQKGIVNQL---LDQ 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|63191799|gb|AAY34859.1| small ribosomal protein subunit 4 [Hilpertia velenovskyi] Length = 191 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRKKSQVMITKNLDFSQKSKIPNHLTFNSLEKKGLINQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|149192393|ref|ZP_01870594.1| 30S ribosomal protein S4 [Vibrio shilonii AK1] gi|148833784|gb|EDL50820.1| 30S ribosomal protein S4 [Vibrio shilonii AK1] Length = 172 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 66/166 (39%), Positives = 104/166 (62%), Gaps = 6/166 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG+HG RR Y G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 +H+ +LVNG+ VN+ S++ DV+ +++K+KQ A + A ++A+ Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVADN 164 >gi|37992457|gb|AAR06407.1| small ribosomal protein 4 [Chaetomitrium borneense] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG ++E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-VTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNGCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I ++ + K + + + ++ +P +++ + I L Sbjct: 117 DIPSYRCKPQDFITIENRQKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNEI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|13508185|ref|NP_110134.1| 30S ribosomal protein S4 [Mycoplasma pneumoniae M129] gi|1173262|sp|P46775|RS4_MYCPN RecName: Full=30S ribosomal protein S4 gi|639791|gb|AAA61698.1| ribosomal protein S4 [Mycoplasma pneumoniae] gi|1674077|gb|AAB96043.1| ribosomal protein S4 [Mycoplasma pneumoniae M129] gi|301633685|gb|ADK87239.1| ribosomal protein S4 [Mycoplasma pneumoniae FH] Length = 205 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 111/207 (53%), Gaps = 9/207 (4%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 K S K RR+G +L K S R PG HG R R S S + QL+ KQ+M+ Sbjct: 2 KYTGSIFKRSRRLGFSLLENNKEFSKGKKRKTIPGQHGNRFRSSTMSGYAQQLQEKQRMQ 61 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I++K+FR +F+ + RG+ + NL LESRLD IVYR F PT +ARQ VNH Sbjct: 62 YMYG-ITDKQFRRLFRLVLKQRGNLAVNLFRVLESRLDNIVYRMGFAPTRRSARQLVNHG 120 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HVL+N R+V+ S GD + +K K+ ++ V AS+ V ++ N+ T+ Sbjct: 121 HVLLNDRTVDTPSIILNPGDKVRLKAKTIKIPIVKAASESG--VVSPFVETNNKTFEGTY 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + P + + VVE+Y R Sbjct: 179 VRFPERSE---LPAGINESYVVEWYKR 202 >gi|32401828|gb|AAP80902.1| small ribosomal protein 4 [Euptelea polyandra] Length = 184 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + K A + + ++P++++++ +I S + + Sbjct: 116 RDIITTRDEQKSRALIQNSLDSPPHEELPKHLTLHSSQYQGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|160415784|gb|ABX39199.1| small ribosomal protein 4 [Grimmia caespiticia] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|42718098|gb|AAS38471.1| rps4 [Tetraplodon angustatus] Length = 189 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|42718072|gb|AAS38458.1| rps4 [Tayloria indica] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PT+ ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNDRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNQQKSQAIINKNIEFSQKSKIPNHLTYNSLKKQGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|42405304|gb|AAS13478.1| rps4 small ribosomal protein [Rhynchostegiopsis flexuosa] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A + +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKLKIPNHLTYSFLEKKGLINQI---LH 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992663|gb|AAR06510.1| small ribosomal protein 4 [Ptychomnion aciculare] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + + ++ +P +++ + +I L Sbjct: 117 NIPSYRCKPQDFIIIKDEKNYEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|71679580|gb|AAZ38858.1| ribosomal protein small subunit 4 [Hymenophyllum mnioides] Length = 207 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 10/207 (4%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+ + K + Q K S F ++L AKQ+++ YG Sbjct: 5 YRGPRFKIIRRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYG 62 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 +E++ + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LV Sbjct: 63 S-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILV 121 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYIS--VNHDNM-VATF 179 N V+I SYRCK D+I V+ + + E + R +P++++ + DNM Sbjct: 122 NNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNMPKGLV 181 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 182 NGI---ANRESIDLNINELLVVEYYSR 205 >gi|160415788|gb|ABX39201.1| small ribosomal protein 4 [Grimmia mollis] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|11228643|gb|AAG33107.1| small ribosomal protein 4 [Eucamptodon muelleri] Length = 189 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A +++ +++ VP +++ + +I L Sbjct: 117 RCKPQDFITIKDRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLINQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|328488182|gb|AEB19904.1| small ribosomal protein 4 [Schistochila blumei] Length = 191 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ YYG ++E++ Sbjct: 1 IRRLGSLPGLTNKILKPKSSY---IDRSTANKKFSQYRIRLEEKQKLRFYYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIRNKQKSQLIITRNLNLLQKLKIPNHLTFDSTQLQGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|157689536|gb|ABV65324.1| ribosomal protein S4 [Penaea mucronata] Length = 187 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 10/193 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R SK S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I + + K A + + RD +P++ + + +I S + + Sbjct: 116 KPQDIITARDEQKSRALIQNCLDSSPRDEELPKHXTFHPFQYKGLVNQIIDSKR---VGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|21914178|gb|AAM81311.1| ribosomal protein subunit 4 [Haplodontium reticulatum] gi|24473840|gb|AAL82764.1| small ribosomal subunit protein 4 [Ptychostomum pallescens] Length = 190 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 YRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|254796937|ref|YP_003081774.1| ribosomal protein S4 [Neorickettsia risticii str. Illinois] gi|254590185|gb|ACT69547.1| ribosomal protein S4 [Neorickettsia risticii str. Illinois] Length = 205 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 132/205 (64%), Gaps = 3/205 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K ++ R++ +LWG K PV+ R+YGPG HG+ K S F Q A++ + Sbjct: 1 MTTTIRRKFRVSRQMKASLWGSQKDPVHKRNYGPGQHGRAPVKKISDFYKQNAAQRAFR- 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y I +K+F ++F +A R +G+T+ NLIS LESR+ +++YR+ VPTIFAARQ V+H+H Sbjct: 60 TYYVIGKKQFANVFGKAYRGKGNTNDNLISLLESRVSSVLYRSGMVPTIFAARQLVSHKH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 V VNG VNI S+ KEGDV++++ ++ + V+ A + + P Y+ VN + + Sbjct: 120 VTVNGEIVNICSFTLKEGDVVQIRDRASNIPCVVAALS-SNSESPHYLEVNREKRSVKLL 178 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205 +P +DVPYPV+M+PNLV E++S Sbjct: 179 VLP-KFEDVPYPVVMEPNLVTEYFS 202 >gi|257126747|ref|YP_003164861.1| 30S ribosomal protein S4 [Leptotrichia buccalis C-1013-b] gi|260891350|ref|ZP_05902613.1| ribosomal protein S4 [Leptotrichia hofstadii F0254] gi|257050686|gb|ACV39870.1| ribosomal protein S4 [Leptotrichia buccalis C-1013-b] gi|260858733|gb|EEX73233.1| ribosomal protein S4 [Leptotrichia hofstadii F0254] Length = 195 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 11/206 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K R +G + + + R+ P K + +G Q R KQK+K Sbjct: 1 MARDRQPVLKRCRNLGLDPIVLGVNKKSNRNIRP-----NANRKLTEYGTQQREKQKVKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F +++EA R G T L+ +LE RLD ++YR F T ARQ V+H H Sbjct: 56 VYG-VMEKQFYKLYEEATRKEGVTGELLLQYLERRLDNVIYRLGFGATRRQARQIVSHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +L+NG+ VNI SYR K+GDVI VK+ SK+LA + E+ ++ VP ++S+ + A + Sbjct: 115 ILINGKRVNIASYRVKQGDVITVKEDSKELALIKESV--GQKTVPGWLSLEEGALTAKVL 172 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + +++EFYSR Sbjct: 173 ENPGRDA---VDFEVDEAMIIEFYSR 195 >gi|37992423|gb|AAR06390.1| small ribosomal protein 4 [Ancistrodes genuflexa] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 LRIIRRLGFLPGLSNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T + E+R D I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVSLQLPETRSDNIIFRLGMTPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDQRKSEAIIGKNIEFYQKYKIPNHLTYNLLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESISLKINELLVVEYYSR 192 >gi|29027220|gb|AAN47172.1| small ribosomal protein 4 [Hymenodontopsis mnioides] Length = 189 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIIGKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|74273209|gb|ABA01304.1| ribosomal protein S4 [Passiflora mathewsii] Length = 183 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPRKKLPKHLTLHPFQYKGLVTQIIDSK---WVGLP 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|160415812|gb|ABX39213.1| small ribosomal protein 4 [Schistidium sp. RHM-2007] gi|160415814|gb|ABX39214.1| small ribosomal protein 4 [Schistidium papillosum] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|42794710|gb|AAS45750.1| Rps4 [Thibaudia costaricensis] Length = 211 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K Q KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPKIGNSRRTQSRFVKKKXXXXXXXXQ--EKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + +++G T L+ LE RLD I++R TI ARQ VN RH Sbjct: 59 HYG-LTERQLLKYVRIPGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNXRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 V VNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VXVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPSHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|32892086|gb|AAP88982.1| ribosomal protein S4 [Passiflora caerulea] gi|32892092|gb|AAP88985.1| ribosomal protein S4 [Passiflora setulosa] gi|32892096|gb|AAP88987.1| ribosomal protein S4 [Passiflora tenuifila] gi|32892098|gb|AAP88988.1| ribosomal protein S4 [Passiflora urubiciensis] gi|32892130|gb|AAP89004.1| ribosomal protein S4 [Passiflora amethystina] gi|32892132|gb|AAP89005.1| ribosomal protein S4 [Passiflora campanulata] gi|32892134|gb|AAP89006.1| ribosomal protein S4 [Passiflora jilekii] gi|32892138|gb|AAP89008.1| ribosomal protein S4 [Passiflora garckei] gi|74273179|gb|ABA01289.1| ribosomal protein S4 [Passiflora kermesina] gi|74273181|gb|ABA01290.1| ribosomal protein S4 [Passiflora miersii] gi|74273195|gb|ABA01297.1| ribosomal protein S4 [Passiflora sprucei] gi|74273199|gb|ABA01299.1| ribosomal protein S4 [Passiflora watsoniana] gi|74273219|gb|ABA01309.1| ribosomal protein S4 [Passiflora mendoncaei] gi|90970052|gb|ABE02795.1| ribosomal protein S4 [Passiflora gibertii] gi|91795203|gb|ABE60882.1| ribosomal protein S4 [Passiflora loefgrenii] gi|91795205|gb|ABE60883.1| ribosomal protein S4 [Passiflora picturata] Length = 183 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|32892112|gb|AAP88995.1| ribosomal protein S4 [Passiflora mansoi] Length = 183 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K GD+I VK + K + + + +P++++++ + +I S + Sbjct: 113 KPGDLITVKDEQKSKDMIKNSLDSFRQAQLPKHLTLHRSQYKGSVNKIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|37992535|gb|AAR06446.1| small ribosomal protein 4 [Glyphothecium sciuroides] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKLIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + + + ++ +P +++ + +I L Sbjct: 117 NIPSYRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992481|gb|AAR06419.1| small ribosomal protein 4 [Cyclodictyon albicans] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + +L ++ +P +++ N +I + Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIELYQKIKIPNHLTYNFLEKKGLINQILNRD- 175 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --SIGLKINELLVVEYYSR 192 >gi|26421789|gb|AAN78153.1| ribosomal protein S4 [Tortula vahliana] Length = 195 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI R +G K P + K S + ++L KQK++ YG I+E+ Sbjct: 2 VKIIRGLGGLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFLYG-ITER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 58 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I + + K + + ++ +P +++ N +I L Sbjct: 118 NIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LD 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 QESIGLKINELLVVEYYSR 193 >gi|63101071|gb|AAY33160.1| small ribosomal protein 4 [Chaetomitriopsis glaucocarpa] Length = 195 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ + I L Sbjct: 117 VDIPSYRCKPQDFITIKNRQKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNEI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|42718096|gb|AAS38470.1| rps4 [Tetraplodon itatiaiae] gi|42718102|gb|AAS38473.1| rps4 [Tetraplodon fuegianus] Length = 189 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSST---NQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN R V+I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37992669|gb|AAR06513.1| small ribosomal protein 4 [Rhynchostegiopsis tunguraguana] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNKRKSETIISKNIEFYQKLKIPNHLTYSFLEKKGLINQI---LH 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|32401816|gb|AAP80896.1| small ribosomal protein 4 [Erigeron formosissimus] Length = 184 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRLA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I + + K A + + + + ++P ++++ +I S + + Sbjct: 116 RDTIAARDEQKSRALIQNSLDSSPQEELPNHLTLQPFQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|302339986|ref|YP_003805192.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293] gi|301637171|gb|ADK82598.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293] Length = 205 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 7/203 (3%) Query: 7 SKHKIDRRIGENLWGRPK--SPVNTRSYGPGLH-GQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G NL+G PK + + GPG RR K S +G+QL KQK++ YG Sbjct: 7 PRGKIVRRLGVNLFGNPKYDRILKKKPNGPGKSPKNRRGRKISDYGMQLLEKQKVRYCYG 66 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 +SEK+FR+ F EA R +G T I LESRLD +YR + + ARQ V+H+H V Sbjct: 67 -LSEKQFRTTFFEAKRKQGVTDEIFIQLLESRLDNSIYRLGWAVSREQARQMVSHKHFKV 125 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183 NG+S NI S R K GD I V+ K A + E + R ++S ++D ++AT+ P Sbjct: 126 NGQSTNIPSIRLKPGDEIAVRDKKNIQAIIRERIVNSGRARTPWLSADNDKLIATYDAHP 185 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 S P ++EFYS+ Sbjct: 186 SLEAAKPVG---DLQAIIEFYSK 205 >gi|160415778|gb|ABX39196.1| small ribosomal protein 4 [Glyphomitrium humillimum] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +VP ++ N +I L + Sbjct: 117 CKPQDFITIKNRQKSQAMIIKNVDFSQKAEVPNHLIFNSLEKNGLVNQI---LDQESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992673|gb|AAR06515.1| small ribosomal protein 4 [Schimperobryum splendidissimum] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S ++ K S + ++L KQK++ +YG I+ + Sbjct: 1 VRIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITXR 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 NIPSYRCKPQDFITIKNQRKSEDIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|12330508|gb|AAG52791.1| ribosomal protein 4 [Rhachithecium papillosum] Length = 189 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGPLPGLTNKISQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVSIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K +++ +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIXDRQKSQTIIIKNLDFSQKTKIPNHLTFNSLEKKGLVNQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|46811022|gb|AAT01829.1| small ribosomal protein 4 [Jensenia connivens] Length = 197 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G L G + +RS K S + ++L KQK++ +YG ++E++ Sbjct: 5 KNIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-LTERQ 60 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH+L+N VN Sbjct: 61 LLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILINDDIVN 120 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKD 188 I SY CK DVI +K + + + + + L E+ +P +++ + + +I Sbjct: 121 IPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVNQIIDR--- 177 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 EWISLKINELLVVEYYSR 195 >gi|49182787|gb|AAT57855.1| small ribosomal protein [Radula complanata] Length = 195 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ + A +G T LI LE RLD I++ PTI ARQ VNH+H ++N + Sbjct: 57 KQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY C+ GD+I V+ + K + + + L ++ ++P +++ + + + + + Sbjct: 117 VNIPSYNCELGDIITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSINQ---RI 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 DYNSINFKINELLVVEYYSR 193 >gi|33413183|emb|CAD86728.1| ribosomal protein small subunit 4 [Nanobryum dummeri] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S L+ K S + ++L KQK++ +YG I+E++ + Sbjct: 5 RRLGILQGLTNKIPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 60 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI S Sbjct: 61 YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPS 120 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ L+++ VP +++ N +I L Sbjct: 121 YRCKPQDFITIKDRQKSQAMIIKNINLSQKYKVPNHLTFNSLEKKGLVNQI---LDQESI 177 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 GLKINELLVVEYYSR 192 >gi|63191867|gb|AAY34893.1| small ribosomal protein subunit 4 [Weissia controversa] Length = 190 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|74273223|gb|ABA01311.1| ribosomal protein S4 [Passiflora umbilicata] Length = 183 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I + + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDTK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|78102631|gb|ABB21529.1| small ribosomal protein 4 [Plagiochila bispinosa] Length = 189 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|213856915|ref|ZP_03384155.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 167 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 69/169 (40%), Positives = 108/169 (63%), Gaps = 7/169 (4%) Query: 5 ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQK+++ Sbjct: 1 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIGQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V+H+ Sbjct: 60 IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168 ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWL 167 >gi|160415794|gb|ABX39204.1| small ribosomal protein 4 [Indusiella thianschanica] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A V++ +++D VP +++ N +I L + Sbjct: 117 CKPQDFITIKARKKSQAMVIKNVDFSQKDKVPNHLTFNSLEKKGLVNQI---LDHGSIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|67035891|gb|AAY62872.1| small ribosomal protein subunit 4 [Schofieldiella micans] Length = 194 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I R+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIXRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P ++ + +I Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQIXDR-- 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 -ESIGLKINELLVVEYYSR 192 >gi|16565359|gb|AAL26198.1|AF313591_1 small ribosomal protein 4 [Angiopteris evecta] gi|184128009|gb|ACC67904.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128029|gb|ACC67914.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128045|gb|ACC67922.1| ribosomal protein small subunit 4 [Angiopteris angustifolia] gi|184128047|gb|ACC67923.1| ribosomal protein small subunit 4 [Angiopteris angustifolia] gi|184128065|gb|ACC67932.1| ribosomal protein small subunit 4 [Angiopteris caudatiformis] Length = 199 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + ++ RR+ + K+ + ++ Q K S + ++L AKQ+++ +G ++E Sbjct: 1 RLRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183 V+I SYRCK D+I V+ ++ V + + +D +PE+++ + + RI Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLDINELLVVEYYSR 197 >gi|12330454|gb|AAG52764.1| ribosomal protein 4 [Sphagnum perichaetiale] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P + +Y ++ K S + ++L KQK++ +YG I+ ++ + Sbjct: 2 GILPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITXRQLLKYVR 57 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI SYRC Sbjct: 58 IARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRC 117 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A + + + P +++++ + +I + Sbjct: 118 KPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLK 174 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 INELLVVEYYSR 186 >gi|310657466|ref|YP_003935187.1| 30S ribosomal protein s4 [Clostridium sticklandii DSM 519] gi|308824244|emb|CBH20282.1| 30S ribosomal protein S4 [Clostridium sticklandii] Length = 192 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 14/206 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K+ R +G N++ PK+ G + + K S +G QLR KQK+K Sbjct: 1 MARPMGPRFKVARSLGVNVFDHPKAL---------NRGVKPQKKISEYGKQLREKQKLKA 51 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F+ + A S+G++ L+ LE RLD + YR F T+ ARQ V H H Sbjct: 52 YYGVL-EKQFKIYVEAAMHSKGNSGEKLVQRLEQRLDNMTYRLGFASTLRQARQMVVHGH 110 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+ SY+ + D I +K+KSK +A ++ ++P Y+ N ++ + Sbjct: 111 ILVNGKKVDRPSYKVEVEDTISLKEKSKSIAIFKDSFTSTTTNLP-YLEKNLNDFSGKLI 169 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 P + P+ + + ++EFYS+ Sbjct: 170 AEPKRDQ---VPIEVTDSYIIEFYSK 192 >gi|160415810|gb|ABX39212.1| small ribosomal protein 4 [Schistidium crassipilum] Length = 188 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|293634051|gb|ADE60405.1| ribosomal protein subunit 4 [Pogonatum proliferum] Length = 187 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPPLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I K + + A + + +++ +P +++ N +I L + Sbjct: 117 KPQDFITTKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|160415780|gb|ABX39197.1| small ribosomal protein 4 [Dryptodon anomalus] Length = 188 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|21914156|gb|AAM81300.1| ribosomal protein subunit 4 [Bryum bicolor] Length = 195 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 6 RRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 61 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 62 YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 121 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 122 YRCKPEDSITIKNRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESI 178 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 GLKINELLVVEYYSR 193 >gi|47606942|gb|AAT36391.1| ribosomal protein subunit 4 [Rhizogonium graeffeanum] Length = 194 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P + + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKIPQLKSNS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDQQKYKTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|47606896|gb|AAT36368.1| ribosomal protein subunit 4 [Garovaglia elegans] Length = 195 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 VNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|16565389|gb|AAL26209.1|AF313609_1 small ribosomal protein 4 [Cycas revoluta] Length = 194 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ K P +R+ R+ S + ++ KQK++ +YG ++E Sbjct: 1 RVRIIRRLRTLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 56 RQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRV 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK DVI + + + A + + L+++D +P +++++ +I S Sbjct: 116 VDIPSYRCKPRDVITIIDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WISLKINELLVVEYYSR 192 >gi|7576523|gb|AAF63874.1| ribosomal protein system 4 [Henicodium geniculatum] Length = 190 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKPETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|86438912|emb|CAJ55428.1| small ribosomal protein 4 [Plagiochila pleurata] Length = 180 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 5/184 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGILPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLXXSV 176 Query: 180 VRIP 183 ++ Sbjct: 177 NQMI 180 >gi|293634015|gb|ADE60387.1| ribosomal protein subunit 4 [Oligotrichum canaliculatum] Length = 189 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTLQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|262192902|gb|ACY30468.1| small ribosomal subunit protein 4 [Pohlia nutans] Length = 188 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + ++ +P +++ N N +I L + Sbjct: 117 CKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|42794720|gb|AAS45755.1| Rps4 [Thibaudia litensis] Length = 211 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKW 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG + E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LPERQLLKSVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP +++ N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTXN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|63191829|gb|AAY34874.1| small ribosomal protein subunit 4 [Calyptopogon mnioides] Length = 194 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|170516209|gb|ACB15106.1| small ribosomal protein 4 [Nothotsuga longibracteata] Length = 194 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 9/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K P Y + K S + ++ KQK++ +YG ++E Sbjct: 1 RLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN Sbjct: 56 RQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHM 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK DVI ++ + + A + + L +RD +P++++ N +I S Sbjct: 116 VDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ---WISLKINELLVVEYYSR 192 >gi|37992549|gb|AAR06453.1| small ribosomal protein 4 [Hildebrandtiella guyanensis] gi|37992551|gb|AAR06454.1| small ribosomal protein 4 [Hildebrandtiella guyanensis] Length = 190 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNSCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|15145858|gb|AAK83547.1| rps4 [Tayloria splachnoides] Length = 189 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSNS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDHIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37683558|gb|AAQ98830.1| small ribosomal protein 4 [Pogonatum gracilifolium] Length = 187 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A + + +++ +P +++ N +I L + Sbjct: 117 KPQDFIIIKNRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|118577629|gb|ABL07180.1| small ribosomal protein 4 [Piper vitiense] gi|118577645|gb|ABL07188.1| small ribosomal protein 4 [Macropiper puberulum] Length = 185 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P + S L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 AGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|37992655|gb|AAR06506.1| small ribosomal protein 4 [Pilotrichella flexilis] Length = 190 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|12330504|gb|AAG52789.1| ribosomal protein 4 [Schlotheimia rugifolia] Length = 189 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTSQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++D +P +++ N +I L+ Sbjct: 117 RCKPQDSITIKDRQKSQDIINKNIDFYQKDKIPNHLTYNSLEKKGLVNQI---LERELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|2541880|dbj|BAA22816.1| ribosomal protein S4 [Cyanidioschyzon merolae] Length = 191 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 20/207 (9%) Query: 1 MSKRESSKHKIDRR-IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 MS+ + +I RR +G KSP N R+ PG H + + Y G QL+ KQK++ Sbjct: 1 MSRYLGPRVRIIRRRLGILPAFTNKSP-NKRTGVPGEHAHKTRKLSEYAG-QLQGKQKLQ 58 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YYG I+ + F++A +SR T L+ LE+RLD +VYRA F PT+ AARQ VNH Sbjct: 59 YYYG-ITNNQLARYFRQAKKSRASTGIELLKMLETRLDHVVYRAGFAPTLPAARQLVNHG 117 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV VNG V I S+ C+ +IEVK KS A +P Y+ V + F Sbjct: 118 HVKVNGNQVTIASFACQVNHIIEVKAKSPSSAQ-----------LPPYLQVEN-----QF 161 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V++ ++ + LVVE+Y+R Sbjct: 162 VKMIQPVEKDWLAFRVNELLVVEYYTR 188 >gi|328488170|gb|AEB19898.1| small ribosomal protein 4 [Paraschistochila pinnatifolia] Length = 191 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRSGVLPGLTSKTLKPKSSY---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + Sbjct: 117 SYNCELGDIIAIKNKQKSESMITRNLNLLQKFKIPNHLTFDSTQLQGLVNQKIHR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 VNFKINELLVVEYYSR 189 >gi|59803311|gb|AAX07764.1| Rps4 [Pellia appalachiana] Length = 194 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+G K + S G +K S + ++L KQK++ +YG ++ Sbjct: 1 PRTKIIRRLGALPGLTSK-ILELESGYIGQSIPNKK--VSQYRIRLEEKQKLRFHYG-LT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A +++G T L LE RLD I++R PTI ARQ VNHRH+L+N Sbjct: 57 ERQLLKYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDD 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 +V+I SY C+ DVI V + K+ + + VP +++ + + + Sbjct: 117 TVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR- 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 --ECIDLKINELLVVEYYSR 192 >gi|78102719|gb|ABB21573.1| small ribosomal protein 4 [Plagiochila salacensis] Length = 189 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQVLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I + K K A V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCKPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|11228656|gb|AAG33113.1| small ribosomal protein 4 [Leucoloma serrulatum] Length = 191 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P + ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPELKSNS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + ++ + +++ VP +++ N +I Sbjct: 117 SYRCKPKDFITIKNRQNFQNMTIKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|74273185|gb|ABA01292.1| ribosomal protein S4 [Passiflora nitida] Length = 183 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLSSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|157689470|gb|ABV65291.1| ribosomal protein S4 [Elatine triandra] Length = 183 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K P+ + L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 PGLTSKRPIAKNN----LRNQSRPGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAA 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ +NHRH+LVNGR V+I SYRCK Sbjct: 56 KAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLINHRHILVNGRIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + + K A + + ++++P++++++ +I S + + Sbjct: 116 DIITARDEQKSRAMIQNYLDSSPQKELPKHLTLHPLQYKGLVNQIIDSK---WVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|37992683|gb|AAR06520.1| small ribosomal protein 4 [Squamidium leucotrichum] Length = 193 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+ Sbjct: 57 LLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNECIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 IPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|46811042|gb|AAT01839.1| small ribosomal protein 4 [Podomitrium phyllanthus] Length = 194 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G L G + ++ + K S + ++L KQK++ +YG ++E++ Sbjct: 2 KIIRRLGA-LPGLSYKMLGSKPSHT--NRLTTNRKISQYRIRLEEKQKLRFHYG-LTERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A ++G T L+ LE RLD IV+R PTI AARQ VNHRH+++N +VN Sbjct: 58 LLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIVINDNTVN 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKD 188 I SY CK DVI +K + + + + + L E+ +P +++ + + +I Sbjct: 118 IPSYNCKPRDVITIKNRRESQSIITKNINLFREQRIPNHLTFDSTRFYGSVNQIIDR--- 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 EWISLKINELLVVEYYSR 192 >gi|207108317|ref|ZP_03242479.1| 30S ribosomal protein S4 [Helicobacter pylori HPKX_438_CA4C1] Length = 178 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 9/180 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 M++ + +++RR G +L + KS ++ R+YGPG HGQ R++K S +GLQL+ Sbjct: 1 MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK K YG ISEK+FRSIF EA+R G+T NLI +E RLD +VYR F T +ARQ Sbjct: 60 KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173 V H HVLV+G+ ++I SY + G IE+K+K+K V+ A +L A+ + +I V + Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRAMELTAQTGIVPWIDVEKE 178 >gi|7576567|gb|AAF63896.1| ribosomal protein system 4 [Rhytidiadelphus squarrosus] Length = 188 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQKKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|160415800|gb|ABX39207.1| small ribosomal protein 4 [Ptychomitrium drummondii] Length = 188 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ +NH+H+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHKHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A V++ +++ VP +++ N + +I L + Sbjct: 117 CKPQDFITIKARQKSQAMVIKNVDFSQKYKVPNHLTFNSLEKKGSVNQI---LDHGSIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|7576573|gb|AAF63899.1| ribosomal protein system 4 [Ctenidium malacodes] Length = 190 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|184127941|gb|ACC67870.1| ribosomal protein small subunit 4 [Marattia kaulfussii] Length = 199 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ + K+ + ++ Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183 V+I SYRCK D+I V+ + + + + +D +PE+++ + + RI Sbjct: 118 VDIPSYRCKPKDIISVRDQPNSQILMKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197 >gi|63191839|gb|AAY34879.1| small ribosomal protein subunit 4 [Streptotrichum ramicola] Length = 191 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P + + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I + + K + + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITINNRKKSQSIITNNIEFSQKSKIPHHLAFNSLEKKGLINQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|118577615|gb|ABL07173.1| small ribosomal protein 4 [Piper pendulispicum] Length = 185 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P + S L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 AGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + + + V + A ++P++++++ +I S + + Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASHEELPKHLTLDSSQYKGVVNQIIDSK---WVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|67035885|gb|AAY62869.1| small ribosomal protein subunit 4 [Pterogonidium pulchellum] Length = 190 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 2 RLGTLPGLTNKTSQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V+I SY Sbjct: 58 IRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCMVDIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D+I +K + K + + + ++ +P +++ N +I Sbjct: 118 RCKPQDLISIKNQLKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQIIDR---ESIG 174 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 LKINELLVVEYYSR 188 >gi|67036120|gb|AAY62986.1| small ribosomal protein subunit 4 [Taxiphyllum deplanatum] Length = 194 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRXGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|74273111|gb|ABA01255.1| ribosomal protein S4 [Passiflora racemosa] Length = 183 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRLVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|184128041|gb|ACC67920.1| ribosomal protein small subunit 4 [Angiopteris lygodiifolia] Length = 199 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + ++ RR+ + K+ + ++ Q K S + ++L AKQ+++ +G ++E Sbjct: 1 RLRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183 V+I SYRCK D+I V+ ++ V + + +D +PE+++++ + RI Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLDINELLVVEYYSR 197 >gi|146261581|gb|ABQ15100.1| ribosomal protein S4 [Pterostemon rotundifolius] Length = 188 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGPLPGLTSKRP----RVISDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKY 55 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 56 VRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRJVDIPSY 115 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D+I + + K A + + ++P++++++ +I + Sbjct: 116 RCKSRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDTK---WVG 172 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 LKINELLVVEYYSR 186 >gi|258543843|ref|ZP_05704077.1| 30S ribosomal protein S4 [Cardiobacterium hominis ATCC 15826] gi|258520932|gb|EEV89791.1| 30S ribosomal protein S4 [Cardiobacterium hominis ATCC 15826] Length = 159 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 5/163 (3%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S +G QLR KQK+K+ YG + E++FR+ +K+A + +G T NL+ FLE RLD +VYR Sbjct: 1 MSDYGNQLREKQKLKRIYGVL-ERQFRNYYKKASQKKGSTGENLLQFLEQRLDNVVYRMG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERD 163 + T ARQ V+H + VNG+ V I SY+ + DV+ V++KS++ + + + A+R Sbjct: 60 YGATRAEARQLVSHGAIEVNGKRVTIASYQVRAEDVVAVREKSRKQVRIQSSLEVAAQRG 119 Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ V+ M F R+P + + +LVVE YS+ Sbjct: 120 FVDWVEVDTAKMSGLFKRVPER---IDLSADINESLVVELYSK 159 >gi|118577548|gb|ABL07140.1| small ribosomal protein 4 [Peperomia puteolata] Length = 183 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K PV+ S L Q R K S + ++L KQK++ +YG + E++ + A Sbjct: 1 PGLTSKRPVSESS----LRSQPRYGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNG V+I SYRCK Sbjct: 56 KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + K V + A R ++P++++++ +I +S + + Sbjct: 116 DIITTRNAQKSKVLVQNSMDSASREELPKHLTLDSSQYKGIVNQIINSK---WVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|67035750|gb|AAY62806.1| small ribosomal protein subunit 4 [Pleurorthotrichum chilense] Length = 191 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNRQKSQDIITKNIDFYQKYKIPNHLTYNSLEKNGFVNQI---LDREL 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67036020|gb|AAY62936.1| small ribosomal protein subunit 4 [Scorpiurium deflexifolium] Length = 190 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNMEFHQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|262192922|gb|ACY30477.1| small ribosomal subunit protein 4 [Pohlia crudoides] Length = 188 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + ++ +P +++ N N +I L + Sbjct: 117 CKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|32401763|gb|AAP80870.1| small ribosomal protein 4 [Pinus wallichiana] Length = 191 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 7/195 (3%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K P N + RK S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRFHYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + + R++G T L+ LE RLD I++R PTI ARQ VNH H+ VN V+I S Sbjct: 58 YVRISRRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK DVI ++ + + A + + L +RD +P +++ + +I S Sbjct: 118 YPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFINQIIDSK---WI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 SLKINELLVVEYYSR 189 >gi|33413233|emb|CAD86752.1| ribosomal protein small subunit 4 [Hypodontium dregei] Length = 192 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RRLGTLPGRTKKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 58 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 59 YVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 118 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 119 YRCKPQDFITIKDRQKYQAMIIKNLDFSQKTKVPNHLTFNSLEKNGLVNQI---LDQESI 175 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 GLKINELLVVEYYSR 190 >gi|15145846|gb|AAK83541.1| rps4 [Tayloria squarrosa] gi|42718074|gb|AAS38459.1| rps4 [Tayloria longiseta] Length = 189 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQAIINKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|12642266|gb|AAK00215.1| rps4 [Discelium nudum] Length = 188 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G KSP S ++ K S + ++L+ KQK++ +YG I+E++ + Sbjct: 1 LGVLPGLTNKSPQLKSST---INPSTSNKKISQYRIRLKEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +V R PT+ ARQ VNH+H+LVN V++ S R Sbjct: 57 RIARKAKGSTGQVLLQILEMRLDNVVXRXGMAPTVPGARQLVNHKHILVNDCIVDVPSDR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ VP +++ + +I L + Sbjct: 117 CKPQDFITIKDRPKSQAIIIKNIDFSQKSKVPNHLTFDSLXKKGIVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|66866222|gb|AAY57782.1| small ribosomal protein 4 [Leptotheca gaudichaudii] Length = 205 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 13/202 (6%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 9 IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 64 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 65 LNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHIVDI 124 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVRIPS 184 SYRCK D I +K + K A + D +P +++ N +I Sbjct: 125 PSYRCKPQDFITIKDRQKSQAIIXXXXXXKNLDFYQKYKIPNHLTYNSLEKKGLVNQI-- 182 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 183 -LDRESIGLKINELLVVEYYSR 203 >gi|33413257|emb|CAD86763.1| ribosomal protein small subunit 4 [Cinclidotus fontinaloides] Length = 190 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I S Sbjct: 57 YVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I + + K + + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITINDRQKSQVMITKNVEFSQKSKIPNHLTFNFLEKKGLINQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|42405294|gb|AAS13473.1| rps4 small ribosomal protein [Brymela tutezona] Length = 194 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGILPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + + ++ + +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKMKISNHLTYNFLEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|222103418|gb|ACM44238.1| small ribosomal protein subunit 4 [Sphagnum subsecundum] Length = 185 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 8/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+P + SY ++ K S + ++L KQK++ +YG I+E++ + A Sbjct: 1 LPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIA 56 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI SYRCK Sbjct: 57 RRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCKP 116 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + K A + + + P +++++ + +I + + Sbjct: 117 QDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLKIN 173 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 174 ELLVVEYYSR 183 >gi|328541086|gb|AEB21767.1| ribosomal protein S4 [Zoopsis liukiuensis] Length = 186 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 13/187 (6%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 +PKS N RS K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 10 LKPKSSYNDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKA 60 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R TI ARQ VNH H+ +N V+I SY C+ GD+ Sbjct: 61 KGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHGHIAINHNIVDIPSYNCEPGDI 120 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I ++ K K + +++ L + +P +++ + + + + + + + L Sbjct: 121 ITIRDKQKSQSVIIKNINLFQNLKIPSHLTFDSIKLCGSINQTIN---CEWINLKINELL 177 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 178 VVEYYSR 184 >gi|118577573|gb|ABL07152.1| small ribosomal protein 4 [Piper dominantinervium] gi|118577593|gb|ABL07162.1| small ribosomal protein 4 [Piper longum] gi|118577595|gb|ABL07163.1| small ribosomal protein 4 [Piper magnibaccum] gi|118577617|gb|ABL07174.1| small ribosomal protein 4 [Piper phuwuaense] gi|118577633|gb|ABL07182.1| small ribosomal protein 4 [Piper sp. AC013] Length = 184 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 RDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|283549374|dbj|BAI66349.1| small ribosomal protein 4 [Mnioloma fuscum] Length = 188 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTNKILKTKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R +G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY C+ GD+I VK+K K + + L ++ +P +++ + + + + Sbjct: 117 VNIPSYNCEPGDIITVKKKQKSQFIIGKNLNLFQKLKIPSHLTFDPTELRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWIDLKINELLVV 188 >gi|37992713|gb|AAR06535.1| small ribosomal protein 4 [Trachypodopsis serrulata] Length = 190 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|12330474|gb|AAG52774.1| ribosomal protein 4 [Entosthodon drummondii] Length = 188 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S Q K S + ++L K K++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLRSSSA----NQSTAKKISQYRIRLEEKXKLRFHYG-ITERQLLNY 55 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD IV+R PTI ARQ VNHRHVLVN V I SY Sbjct: 56 VRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNXGIVXIPSY 115 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I VK + K A + + + +++ VP +++ + +I L Sbjct: 116 RCKPEDXITVKNRKKSQAIITKNTYFSQKYKVPNHLTFDFTQKKGLVTQI---LDRESXG 172 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 LKINELLVVEYYSR 186 >gi|12330514|gb|AAG52794.1| ribosomal protein 4 [Archidium tenerrimum] Length = 189 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTSELKSSS---VNQSTSNKKISQYRIRLEEKQKLRXHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + V++ +++ VP ++++N +I L + Sbjct: 117 RCKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---LNNDSIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|59803322|gb|AAX07769.1| Rps4 [Targionia hypophylla] Length = 194 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+ + Y ++ K S + ++L KQK++ +YG ++E++ Sbjct: 3 IIRRLGALPGLINKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQL 58 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N V+I Sbjct: 59 LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNIVDI 118 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK D+I +K + K + + + ++ +P ++ ++ + + Sbjct: 119 PSYNCKPKDIITIKDRQKSQSIITKNLNSFQKQKIPNHLILDLMQIKGLVNQTIDR---E 175 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 WIYLKINELLVVEYYSR 192 >gi|42556502|gb|AAS19846.1| small ribosomal protein 4 [Schistochila appendiculata] Length = 191 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ K K + + L ++ P +++ + + + Sbjct: 117 SYNCELGDIIGIQNKQKSQSMITRNLGLLQKLKTPNHLTFDSTQLRGLVNQKVHR---EF 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|22854737|gb|AAN09788.1| small ribosomal protein 4 [Symblepharis lindigii] Length = 186 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRCK Sbjct: 57 ARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K A +++ +++ VP +++ N +I L + + Sbjct: 117 PQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|47606924|gb|AAT36382.1| ribosomal protein subunit 4 [Hymenodontopsis bifaria] Length = 195 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGALPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 VDIPSYRCKPQDFITMKDRQKYQAIISKNIDFYQKYKIPNHLTYSSLEKKGLVTQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|7576629|gb|AAF63927.1| ribosomal protein system 4 [Fontinalis dalecarlica] Length = 190 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A ++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARNAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + + ++ +P +++ +I L Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFCKKYKIPNHLTYISLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67035853|gb|AAY62853.1| small ribosomal protein subunit 4 [Hydropogon fontinaloides] Length = 195 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I R +G K+P K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRXLGILPGLTNKTPQLKSXS---SXQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSEILINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|7576593|gb|AAF63909.1| ribosomal protein system 4 [Pilotrichella flexilis] Length = 189 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|66866249|gb|AAY57793.1| small ribosomal protein 4 [Racopilum ferriei] Length = 200 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 13/205 (6%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGALPGLTDKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNH+HVLVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHKHVLVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLAS-----VLEASQLAER-DVPEYISVNHDNMVATFVR 181 V+I SYRCK D I +K + K A + ++ +P +++ + + Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAITXXXXXXKNIDFYQKYKIPNHLTYSSLEKKGFVNQ 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I L + + LVVE+YSR Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198 >gi|63100991|gb|AAY33120.1| small ribosomal protein 4 [Henicodium geniculatum] Length = 191 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKPETIISKNIEFYQKSKIPNHLTYSXLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|256544532|ref|ZP_05471905.1| 30S ribosomal protein S4 [Anaerococcus vaginalis ATCC 51170] gi|256399857|gb|EEU13461.1| 30S ribosomal protein S4 [Anaerococcus vaginalis ATCC 51170] Length = 197 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + S + R+ ++ K S +G+Q R KQK K Sbjct: 1 MAVSRDPIFKRCRSLGISPAYLGYSGESKRTN------SNQRRKLSEYGMQQREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FRS +++A + +G T NLI E RLD I +R+ T ARQ V H H Sbjct: 55 IYG-VSEKQFRSYYEKASKMQGQTGENLIILCERRLDNIAFRSGLARTRREARQIVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVNG+SV+I S EGDVIEVK+KS+ + + V ++ + +N+ Sbjct: 114 LLVNGKSVDIPSILVNEGDVIEVKEKSRSSQLFKAIKETNQSFGVVSWLDSDLENLKVKV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ +D+ PV + ++VEFYS+ Sbjct: 174 TNFPTR-EDIDIPV--EERMIVEFYSK 197 >gi|42556476|gb|AAS19833.1| small ribosomal protein 4 [Paraschistochila tuloides] Length = 191 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+ SY K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRSGILPGLTGKTLKPKSSYTD---RSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINKNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNKQKSQSMITRNLNLLQKFKIPNHLTFDSTQLQGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|7576557|gb|AAF63891.1| ribosomal protein system 4 [Acroporium pungens] Length = 190 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCMVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L+ Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LERES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 174 IGLKINELLIVEYYSR 189 >gi|229829399|ref|ZP_04455468.1| hypothetical protein GCWU000342_01489 [Shuttleworthia satelles DSM 14600] gi|229791830|gb|EEP27944.1| hypothetical protein GCWU000342_01489 [Shuttleworthia satelles DSM 14600] Length = 197 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ ++ K R +G + + R + + K S +G QL+ KQK K Sbjct: 1 MAIDKTPVLKRCRSLGLDPVFLGVDKKSKRQP------RNSRRKVSEYGKQLKEKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK FR+ +++AD +G T NL++ LESRLD +V+R + T ARQ V+H+ Sbjct: 55 IYGVL-EKPFRNYYRQADVKKGQTGENLMTILESRLDNVVFRLGWARTRREARQIVDHKF 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 V VNGR VNI SY K GD++E+ +K K L + + + R +P+++ + +N+ AT Sbjct: 114 VAVNGRKVNIPSYLVKAGDLVEIVEKKKTLQRMKDIVEVTGGRMIPDWLEADTENLKATV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+ + V + +VE YS+ Sbjct: 174 KSLPTRDQ---IDVPVDEMQIVELYSK 197 >gi|197131482|gb|ACH47259.1| ribosomal protein S4 [Geranium carolinianum] Length = 204 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 13/209 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+GE + P + R+K + +Y+ L KQ+++ Sbjct: 1 MSRYRGPRFKKIRRLGELPGLTTRIPKDKTQPF------RKKREKNYYQSCLHEKQRIRF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 55 HYG-LTERQLLQYVRIAVKAKGITGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177 +LVNGR V+I SYRCK D+I ++K K + + + ++ +P++++ Sbjct: 114 ILVNGRMVDIPSYRCKPRDIITAREKEKSRTLIQNYLESSLRKKKKLPDHLTRYPLQYKG 173 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + ++ ++V +YSR Sbjct: 174 LVNQIIDRK---SVGLKIEELVLVGYYSR 199 >gi|184127951|gb|ACC67875.1| ribosomal protein small subunit 4 [Marattia laxa] gi|184127953|gb|ACC67876.1| ribosomal protein small subunit 4 [Marattia laxa] Length = 199 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ + K+ + ++ Q K S + ++L AKQ+++ +G ++E Sbjct: 1 RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183 V+I SYRCK D+I V+ ++ V + + +D +PE+++++ + RI Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDKIPEHLTLSSLEDNKPQGFVNRIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197 >gi|63100997|gb|AAY33123.1| small ribosomal protein 4 [Herpetineuron toccoae] Length = 194 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---XNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37992667|gb|AAR06512.1| small ribosomal protein 4 [Ptychomnion ptychocarpon] Length = 194 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFIIIKNQQNFEIVINKNTDFYQKYKIPNHLTYSSLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|42794718|gb|AAS45754.1| Rps4 [Thibaudia inflata] Length = 211 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 106/215 (49%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K K S + ++L+ KQK Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKW 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG + E+ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LPERXLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP +++ N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTXN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|34147961|gb|AAQ62557.1| ribosomal protein S4 [Tetrastylis ovalis] Length = 180 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I Sbjct: 13 SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVRIAAKAKGPTGPVLLQLLEMRLDNI 71 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-Q 158 ++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I VK + K + + Sbjct: 72 LFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDLITVKDEQKSKDMIQNSLDS 131 Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ +I S + + LVVE+YSR Sbjct: 132 FPQEKLPKHLTLDPFQYKGLVNQIIDSK---WVGLQINELLVVEYYSR 176 >gi|32892082|gb|AAP88980.1| ribosomal protein S4 [Passiflora haematostigma] gi|74273095|gb|ABA01247.1| ribosomal protein S4 [Passiflora rhamnifolia] Length = 183 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K GD+I VK + K + + ++ +P+++++ + +I S + Sbjct: 113 KPGDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLYRSQYKGSVNKIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|32401799|gb|AAP80888.1| small ribosomal protein 4 [Calycanthus chinensis] Length = 184 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RSGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + A + + ++P++++ +I S + + Sbjct: 116 RDIITTRDEQRSRALIQNYLDSPSHEELPKHLTFQPSQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|67035815|gb|AAY62838.1| small ribosomal protein subunit 4 [Anomodon viticulosus] Length = 189 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|197131492|gb|ACH47264.1| ribosomal protein S4 [Pelargonium cotyledonis] Length = 229 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 27/230 (11%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYG--------------PGLHGQRRKSKPS 46 MS+ + KI R+ K P + + K S Sbjct: 1 MSRYRGPRQKIINRLRSLPGLTSKQPRDNKQPRVVSDPSDVSDPRVEKDPRNPPPSKKKS 60 Query: 47 YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD ++R Sbjct: 61 QYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMA 119 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERD 163 TI ARQ VNHRH+LVN R V+I SYRCK D+I ++K K A + + ++ Sbjct: 120 STIPQARQLVNHRHILVNNRIVDIPSYRCKPRDIISAREKEKSRALIQNYLDSSAKNQKA 179 Query: 164 VPEYISVNH-------DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++ +NH D + + +I + V ++ LVVE+YSR Sbjct: 180 LPHHLILNHRLSDDPRDLLKGSVKQIIDR-EGVGLK-EIKELLVVEYYSR 227 >gi|46811008|gb|AAT01822.1| small ribosomal protein 4 [Haplomitrium blumei] Length = 193 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 7/195 (3%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G L G + +RS +K S + ++L KQK++ +YG ++E++ Sbjct: 4 IRRLGT-LPGXTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+++N ++V+ Sbjct: 60 RYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMINDKTVDAP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ D+I K + + + + P ++ ++ V +I Sbjct: 120 GYNCEPRDIITTKNPMESRLGMAKGMDSIQSKKPNHLFIDSSKGVGLVNQIIDR---EWI 176 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 SLKINELLVVEYYSR 191 >gi|37992695|gb|AAR06526.1| small ribosomal protein 4 [Symphyodon imbricatifolius] Length = 194 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ RR+G K+ S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRLIRRLGTLPGLTNKTSQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|22854731|gb|AAN09785.1| small ribosomal protein 4 [Paraleucobryum longifolium] Length = 187 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I ++ + K A +++ +++ +P +++ + +I L + Sbjct: 117 KPQDFITIEDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|37683562|gb|AAQ98832.1| small ribosomal protein 4 [Pogonatum proliferum] Length = 188 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R P+I ARQ VNH+H+L+N VNI SYR Sbjct: 57 RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPSIPGARQLVNHKHILINDYIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LNRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|33413249|emb|CAD86759.1| ribosomal protein small subunit 4 [Calymperes palisotii subsp. richardii] Length = 192 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K P S ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY+CK D I +K + K +++ + + +P +++ N +I L Sbjct: 117 PSYQCKPQDFITIKDQQKYQTMIVKNINFSPKYKIPSHLTFNSVEKKGLVNQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|39546755|gb|AAR28104.1| small ribosomal protein 4 [Andreaea wilsonii] gi|63191769|gb|AAY34844.1| small ribosomal protein subunit 4 [Andreaea wilsonii] Length = 191 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSGY---MNQFISNKKMSQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RL+ I++R TI ARQ VNHRH+LVN R VNI Sbjct: 57 KYVRIARRAKGSTGQILLQLLEMRLNNIIFRLGMASTIPGARQLVNHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A +++ +++ +P ++ N +I Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIIKNIDCSQKYKIPNHLIFNSLQKKGLINQIIDR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|12330458|gb|AAG52766.1| ribosomal protein 4 [Andreaeobryum macrosporum] Length = 189 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RLGVLPGLTNKTSQLKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+L+N R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNVIFRLGLAPTIPGARQLVNHRHILINNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + +++ +P ++++N + +I Sbjct: 117 RCKPQDFITIKDRQKSRAIITKNMDCSQKYKIPNHLTLNSLEKKGSVNQIIDR---ESLG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|12330540|gb|AAG52807.1| ribosomal protein 4 [Meesia uliginosa] gi|42718106|gb|AAS38475.1| rps4 [Meesia triquetra] Length = 188 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LNRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|20531090|gb|AAM27366.1| ribosomal protein 4 [Diphyscium longifolium] Length = 192 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + +++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKDRQKSQNIIGKNLDFSQKYKIPNHLTFDSLEKKGLVNQI---LDHE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + L E+YSR Sbjct: 174 SSGLKINELLXXEYYSR 190 >gi|78102707|gb|ABB21567.1| small ribosomal protein 4 [Plagiochila parvifolia] Length = 189 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I + K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIIIIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --ELIDLKINELLVVE 189 >gi|33413229|emb|CAD86750.1| ribosomal protein small subunit 4 [Dialytrichia mucronata] Length = 190 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I S Sbjct: 57 YVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|32401824|gb|AAP80900.1| small ribosomal protein 4 [Rubus odoratus] Length = 184 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKKP----RAGNDLRTQSRPGKKSQYRIRLEEKQKLRFHYG-LTEQQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + K A + + ++P++++++ +I S + + Sbjct: 116 RDIITXRDEQKSKALIQNHLDSSPPEELPKHLTLHPLQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|12330542|gb|AAG52808.1| ribosomal protein 4 [Meesia triquetra] gi|42718104|gb|AAS38474.1| rps4 [Meesia uliginosa] Length = 189 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNLEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|293634007|gb|ADE60383.1| ribosomal protein subunit 4 [Notoligotrichum trichodon] Length = 188 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+ Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVTHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNFLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|16565355|gb|AAL26196.1|AF313589_1 small ribosomal protein 4 [Danaea elliptica] gi|184127921|gb|ACC67860.1| ribosomal protein small subunit 4 [Danaea elliptica] Length = 198 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 11/203 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ + K+ + S + K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKLIRRLKDLPGLTTKTLKSKESQ---IAMDPASKKISQYCIRLEAKQRLRFNYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R P+I AARQ VNHRH+LVN R Sbjct: 57 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRL 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISV---NHDNMVATFVRIP 183 V+I SYRCK D+I V+ ++ + V + + +D +PE+++ D +I Sbjct: 117 VDIPSYRCKPKDIINVRNQTNSQSLVKRSLESLNKDKIPEHLTFSLLEDDKPQGLVNKIV 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 177 TRD---SIGLNINELLVVEYYSR 196 >gi|78102653|gb|ABB21540.1| small ribosomal protein 4 [Plagiochila sciophila subsp. echinata] Length = 189 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + +L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTFKSKSSY---IDRSTPNKKVSQYRXRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD + R PTI ARQ VNH H+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHGHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I + K K + V + ++ +P +++ + + + ++ Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMIDR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + L VE Sbjct: 176 --EWINLKINEVLXVE 189 >gi|67036022|gb|AAY62937.1| small ribosomal protein subunit 4 [Rhynchostegium serrulatum] gi|67036024|gb|AAY62938.1| small ribosomal protein subunit 4 [Steerecleus serrulatus] Length = 194 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ +NHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLINHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P ++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLIYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|33413197|emb|CAD86734.1| ribosomal protein small subunit 4 [Kiaeria glacialis] Length = 185 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPHLKSSSINQ--STSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR VNI SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNGRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ VP +++ N +I L + + Sbjct: 118 DFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|7576595|gb|AAF63910.1| ribosomal protein system 4 [Hygroamblystegium tenax] Length = 188 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576579|gb|AAF63902.1| ribosomal protein system 4 [Thuidium delicatulum] Length = 190 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTSQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67035817|gb|AAY62839.1| small ribosomal protein subunit 4 [Haplohymenium triste] Length = 191 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPRLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67036018|gb|AAY62935.1| small ribosomal protein subunit 4 [Eurhynchiella acanthophylla] Length = 194 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTSKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNYCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|7576561|gb|AAF63893.1| ribosomal protein system 4 [Pseudoscleropodium purum] Length = 189 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLNYSFLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|37992525|gb|AAR06441.1| small ribosomal protein 4 [Garovaglia compressa] Length = 194 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKLIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T + LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 DIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67036034|gb|AAY62943.1| small ribosomal protein subunit 4 [Stenocarpidiopsis salicicola] Length = 194 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTXKTPQLKSXS---INQSTSNKKXSQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNBXIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEXIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|74273229|gb|ABA01314.1| ribosomal protein S4 [Adenia keramanthus] Length = 185 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G P +RS + K S + ++L+ KQK++ +YG ++E++ + A Sbjct: 3 LPGLPSKSPKSRSAFQNQS----RCKKSQYSIRLQEKQKLRFHYG-LTERQLLKYVRIAA 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R V+I +YRCK Sbjct: 58 KAKGPTGQVLLQLLEMRLDNMLFRLGMASTIPQARQLVNHRHILVNSRIVDIPNYRCKPR 117 Query: 139 DVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I VK + K + + + +P++++++ +I + + Sbjct: 118 DLITVKDEQKSKDMIQNSLASFPQEKLPKHLTLDPLQYKGLVNQIIDRK---WVGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|167749411|ref|ZP_02421538.1| hypothetical protein EUBSIR_00365 [Eubacterium siraeum DSM 15702] gi|167657583|gb|EDS01713.1| hypothetical protein EUBSIR_00365 [Eubacterium siraeum DSM 15702] gi|291532117|emb|CBK97702.1| SSU ribosomal protein S4P [Eubacterium siraeum 70/3] gi|291558143|emb|CBL35260.1| SSU ribosomal protein S4P [Eubacterium siraeum V10Sc8a] Length = 198 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K + +G + S R + K S +G+QL+ KQK+K Sbjct: 1 MAVDRQPVLKRCKALGISPMVLGYSKETNRHA-----NANNRKKVSEYGMQLKEKQKLKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F ++ A + G NLI LESRLD +V+R T ARQ V H H Sbjct: 56 IYGVL-EKQFYHYYEMAVKMDGVAGENLIKILESRLDNVVFRMGMAITRREARQLVTHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ V++ SYR K GDV+ V + SK+ + + R VP ++ VN + M A Sbjct: 115 FTVNGKKVDVPSYRIKPGDVVAVSETSKKSPKFAQIIEQTNGRIVPLWLDVNKEAMTAKV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R + + + +L++E YS+ Sbjct: 175 TREFNRDE---LDYEIAEHLIIELYSK 198 >gi|7576615|gb|AAF63920.1| ribosomal protein system 4 [Entodon brevisetus] Length = 188 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|3098168|gb|AAC15532.1| small ribosomal protein 4 [Bryum stenotrichum] Length = 190 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGSLPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 YRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|63101065|gb|AAY33157.1| small ribosomal protein 4 [Horikawaea redfearnii] Length = 194 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGELLLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SY+CK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYQCKPQDFITIKNQRKSKTIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|307828428|gb|ADN95011.1| small ribosomal protein 4 [Fossombronia truncata] Length = 190 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 2 RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 58 VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK GDVI V+ + K + + + L ++ P +++++ + + + Sbjct: 118 SCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WIN 174 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 LKINELLVVEYYSR 188 >gi|12642264|gb|AAK00214.1| rps4 [Amblyodon dealbatus] gi|42718118|gb|AAS38481.1| rps4 [Amblyodon dealbatus] Length = 188 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P T S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLTSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|58293903|gb|AAW69898.1| small ribosomal protein 4 [Stoneobryum mirum] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSSA---NQLTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKSKIPNHLTYNFLEKKGFVNQIIDR---ELIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|20531098|gb|AAM27370.1| ribosomal protein 4 [Timmiella crassinervis] gi|22854741|gb|AAN09790.1| small ribosomal protein 4 [Timmiella crassinervis] gi|33413243|emb|CAD86756.1| ribosomal protein small subunit 4 [Timmiella anomala] Length = 186 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 ARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K A + + + ++ VP +++ N +I L + + Sbjct: 117 PQDFITIKDRQKSQAIITKNIEFFQKYKVPNHLTFNSLQKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|307828424|gb|ADN95009.1| small ribosomal protein 4 [Fossombronia truncata] Length = 190 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 2 RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 58 VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK GDVI V+ + K + + + L ++ P +++++ + + Sbjct: 118 SCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WIN 174 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 LKINELLVVEYYSR 188 >gi|218157213|gb|ACK58423.1| ribosomal protein subunit 4 [Atrichum tenellum] Length = 188 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNRQEFQAIITRNINFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 EINELLVVEYYSR 186 >gi|99640381|emb|CAJ45120.1| putative ribosomal protein S4 gene [Lygodium japonicum] Length = 200 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ + K+ ++ G RK S F ++L AKQ+++ YG +E Sbjct: 1 RLKIVRRLKDLPGLTSKTSNPKKTRIDGDPSASRK--TSQFCIRLEAKQRLRFNYGS-TE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++ G T + LE RLD IV+R PTI AARQ VNHRH+ VN R Sbjct: 58 RQLLRYIRIARKAEGSTGQVSLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIPVNNRI 117 Query: 128 VNIGSYRCKEGDVIEVKQ--KSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRI 182 V+I SYRCK D+I K + ++P+++++ D + I Sbjct: 118 VDIPSYRCKPKDIIASKGLLIPSGTLKSIGTESFKRNEIPDHLTLFAAEADQTKGSVNGI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 VNR---ESIHLNINELLVVEYYSR 198 >gi|7576605|gb|AAF63915.1| ribosomal protein system 4 [Trachypus bicolor] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESV 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SLKINELLVVEYYSR 188 >gi|58293873|gb|AAW69884.1| small ribosomal protein 4 [Orthotrichum affine] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHSIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGVVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|63191809|gb|AAY34864.1| small ribosomal protein subunit 4 [Crumia latifolia] Length = 190 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKIPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESV 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|42556390|gb|AAS19790.1| small ribosomal protein 4 [Aphanolejeunea gracilis] Length = 188 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K L K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTSKISKTK------LDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ TI ARQ VNH+H+ +N VNI Sbjct: 54 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFSMGMARTIPNARQLVNHKHIFINNYIVNIP 113 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 SYNCKAGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDSTELRGLINQTIRR---EW 170 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 171 IDLKINELLVVEYYSR 186 >gi|32892088|gb|AAP88983.1| ribosomal protein S4 [Passiflora eichleriana] gi|74273173|gb|ABA01286.1| ribosomal protein S4 [Passiflora exura] Length = 183 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP + R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSVF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|157689462|gb|ABV65287.1| ribosomal protein S4 [Datisca cannabina] Length = 174 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 5/176 (2%) Query: 32 YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISF 91 G L Q R K S + ++L KQK++ +YG ++E++ A +++G T L+ Sbjct: 1 TGSDLKNQARSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVHIAGKAKGSTGQVLLQL 59 Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK D+I K + K A Sbjct: 60 LEMRLDNIIFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCKPRDIITAKDEQKSRA 119 Query: 152 SVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 LIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WIGLKINELLVVEYYSR 172 >gi|184128039|gb|ACC67919.1| ribosomal protein small subunit 4 [Angiopteris hypoleuca] gi|184128063|gb|ACC67931.1| ribosomal protein small subunit 4 [Angiopteris caudatiformis] gi|184128073|gb|ACC67936.1| ribosomal protein small subunit 4 [Archangiopteris caudata] Length = 198 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 10/202 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ RR+ + K+ + ++ Q K S + ++L AKQ+++ +G ++E+ Sbjct: 1 LRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V Sbjct: 58 QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPS 184 +I SYRCK D+I V+ ++ V + + +D +PE+++ + + RI + Sbjct: 118 DIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVT 177 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 RD---SIGLDINELLVVEYYSR 196 >gi|33413221|emb|CAD86746.1| ribosomal protein small subunit 4 [Dicranoweisia cirrata] Length = 185 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ VP +++ N +I L + + Sbjct: 118 DFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|3098178|gb|AAC15537.1| small ribosomal protein 4 [Cyrtomnium hymenophyllum] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N N +I L Sbjct: 117 RCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|17025820|gb|AAL32077.1| ribosomal protein 4 [Syrrhopodon ciliatus] Length = 194 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S ++ K S + ++L KQK++ +YG ++E+ Sbjct: 1 VKIIRRLGTLSGLTSKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-LTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SY+CK D I +K + K +++ + + P+++ N +I L Sbjct: 117 NIPSYQCKPQDFITIKDQQKYQTMIVKNTTFFSKYKTPKHLLFNSVEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|7576541|gb|AAF63883.1| ribosomal protein system 4 [Phyllogonium viride] Length = 188 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|257440241|ref|ZP_05615996.1| ribosomal protein S4 [Faecalibacterium prausnitzii A2-165] gi|257197275|gb|EEU95559.1| ribosomal protein S4 [Faecalibacterium prausnitzii A2-165] Length = 200 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K + +G + G K S +G RK + Y QL+ KQK+ Sbjct: 1 MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNS-----NGNVRKKQSEY-ASQLKEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + EK+F + + A+ G T NL+ +E RLD +V+R F T ARQ V+H Sbjct: 55 KFIYGVL-EKQFHNAYLRAEARPGKTGENLLQIMECRLDNVVFRLGFAQTRRDARQLVSH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176 H VNG+ VNI SY+ K GDVIEV++ S+ A + + +P +++ + Sbjct: 114 AHFTVNGKKVNIPSYQVKAGDVIEVRESSRSSAKFAKLVGPEAPVVALPSWLNREAGTLK 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P D+ Y V +L+VE YS+ Sbjct: 174 GVVTKLPER-SDIDYEVA--EHLIVELYSK 200 >gi|12330482|gb|AAG52778.1| ribosomal protein 4 [Tayloria splachnoides] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSNS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRLKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|49182716|gb|AAT57820.1| small ribosomal protein [Haplomitrium hookeri] Length = 195 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G +L G + ++ RK S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLG-SLPGLTNKVLGSKPGYTDQLISNRK--VSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T H L LE RLD +++R TI ARQ VNHRH+L+N + Sbjct: 57 RQLLKYVRIARRAKGSTGHVLSQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILINDEA 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I Y CK D+I +K S+ + + ++R P ++ + + +I Sbjct: 117 VDIPGYNCKPRDIITLKNTSESRSGSAKDIDFSKRSRTPNHLVFDSSRGMGFVNQIIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWISLKINELLVVEYYSR 193 >gi|160415790|gb|ABX39202.1| small ribosomal protein 4 [Dryptodon patens] Length = 188 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + +++ ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSKSMIIKNMDFYQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|42718076|gb|AAS38460.1| rps4 [Tayloria subglabra] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQESQAIINKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|218157231|gb|ACK58432.1| ribosomal protein subunit 4 [Polytrichum juniperinum] gi|293633981|gb|ADE60370.1| ribosomal protein subunit 4 [Dendroligotrichum squamosum] gi|293634111|gb|ADE60435.1| ribosomal protein subunit 4 [Polytrichastrum tenellum] gi|293634115|gb|ADE60437.1| ribosomal protein subunit 4 [Polytrichastrum xanthopilum] Length = 187 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|7576617|gb|AAF63921.1| ribosomal protein system 4 [Plagiothecium laetum] Length = 188 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|67035841|gb|AAY62847.1| small ribosomal protein subunit 4 [Chionostomum rostratum] Length = 192 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + + + + + ++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITIKNQRQSETIINKNIEFYQKSKIPNHLTYNSLENKGLINQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIDLKINELLVVEYYSR 190 >gi|90970060|gb|ABE02799.1| ribosomal protein S4 [Passiflora gardneri] Length = 183 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIPNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|7576539|gb|AAF63882.1| ribosomal protein system 4 [Neorutenbergia usagarae] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPLLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKYEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDSESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 174 GLKINELLIVEYYSR 188 >gi|7576551|gb|AAF63888.1| ribosomal protein system 4 [Brachythecium oxycladon] Length = 189 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|86438904|emb|CAJ55414.1| small ribosomal protein 4 [Plagiochila obovata] Length = 185 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 KIIRRLGALPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ FLE RLD ++R PTI ARQ VNHRH+ +N V+ Sbjct: 57 LLKYMRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + ++ + Sbjct: 117 IPSYNCEPGDIITIRDKQKSQSAITKNINSFQKVKIPSHLTFDSTQLRGSVNQMINR--- 173 Query: 189 VPYPVIMQPNLV 200 + + LV Sbjct: 174 EWINLKINELLV 185 >gi|37992527|gb|AAR06442.1| small ribosomal protein 4 [Garovaglia elegans] Length = 194 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKMSQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T + LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK DVI VK + + + ++ +P +++ +I L Sbjct: 117 NIPSYRCKPQDVIIVKNEKNSEGVINKDEDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|125662712|gb|ABN50306.1| small ribosomal protein 4 [Ephedra rhytidosperma] Length = 206 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 14/211 (6%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60 S+ + KI RR+ K P + +H R K S + + L+ KQK++ Sbjct: 2 SRYRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175 +LVN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 117 ILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKSRNRVPHYLTFNLSQN 176 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 KGIVNKIIDTKD---LQLKIKEMLVIEYYSR 204 >gi|7576597|gb|AAF63911.1| ribosomal protein system 4 [Campylium chrysophyllum] Length = 189 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|11228652|gb|AAG33111.1| small ribosomal protein 4 [Leucoloma humbertii] gi|22854721|gb|AAN09780.1| small ribosomal protein 4 [Leucoloma sprengelianum] Length = 191 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P + ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPELKSNS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R VPTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIVPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + L+ + +++ VP +++ N +I Sbjct: 117 SYRCKPKDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|118577611|gb|ABL07171.1| small ribosomal protein 4 [Piper ornatum] Length = 184 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + V + A R ++P++++++ +I S + + Sbjct: 116 RDIITTINEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|115531917|ref|YP_784073.1| ribosomal protein S4 [Pelargonium x hortorum] gi|122164277|sp|Q06FV8|RR4_PELHO RecName: Full=30S ribosomal protein S4, chloroplastic gi|112382071|gb|ABI17264.1| ribosomal protein S4 [Pelargonium x hortorum] Length = 214 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 12/214 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K +R+G K P L + K K Y ++L KQK++ Sbjct: 1 MSRYRGPRVKKIKRLGSLPGLTTKKPPIVVRDPRKLSRPKPKKKSQYR-IRLEEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 60 HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER---DVPEYISVNHDN--- 174 +LVNGR V+I SYRCK D+I ++K K A + + +P+++ + H + Sbjct: 119 ILVNGRIVDIPSYRCKPRDLISGREKEKSKALIQNYLDSTAKRPIPLPKHLLLFHSDDPR 178 Query: 175 --MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +I + ++ LV+E+YSR Sbjct: 179 DLLKGSVKKIIDRKEVGL--KKIKELLVIEYYSR 210 >gi|32892104|gb|AAP88991.1| ribosomal protein S4 [Passiflora edmundoi] Length = 183 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNYLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|22091645|emb|CAC86579.1| small ribosomal protein S4 [Schimperobryum splendidissimum] Length = 190 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSEDIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|218157227|gb|ACK58430.1| ribosomal protein subunit 4 [Polytrichastrum alpinum] gi|293634073|gb|ADE60416.1| ribosomal protein subunit 4 [Polytrichastrum alpinum] gi|293634089|gb|ADE60424.1| ribosomal protein subunit 4 [Polytrichastrum norwegicum] Length = 187 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + ++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|91795207|gb|ABE60884.1| ribosomal protein S4 [Passiflora subrotunda] Length = 183 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRLVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDAQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|37992503|gb|AAR06430.1| small ribosomal protein 4 [Duthiella declinata] Length = 191 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 2 RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 58 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 118 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVTQI---LDRESI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 GLKINELLVVEYYSR 189 >gi|15145832|gb|AAK83534.1| rps4 [Tetraplodon urceolatus] Length = 189 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSKAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|42718108|gb|AAS38476.1| rps4 [Meesia muelleri] Length = 189 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKNSQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNLEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37992693|gb|AAR06525.1| small ribosomal protein 4 [Stenodictyon wrightii] Length = 194 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKIPELKSSS---ITQSISSKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDSIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K A + + ++ +P Y++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKNKKKSEAIISKNIDFYQKIKIPNYLTYNFVEKKGLINQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37548863|gb|AAO32700.1| ribosomal protein 4 [Pogonatum neesii] Length = 187 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + + ++ +P +++ N +I L + Sbjct: 117 KPQDFITIKNRQESQAIITKNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|12330538|gb|AAG52806.1| ribosomal protein 4 [Neomeesia paludella] gi|42718110|gb|AAS38477.1| rps4 [Neomeesia paludella] Length = 189 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPKDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKRQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|289599893|gb|ADD12897.1| ribosomal protein S4 [Doliocarpus validus] Length = 186 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K A + ++P++++++ +I S + Sbjct: 116 KPRDIITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|75858238|gb|ABA28693.1| small ribosomal protein 4 [Pleurozia paradoxa] Length = 190 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ +Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGALPGLTNKTLKLKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A + +G T L+ LE RLD ++R V TI ARQ VNHRH+L+N V+I S Sbjct: 57 YVRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVSTIPGARQLVNHRHILINDNVVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ GDVI +K K + + + +R +P ++ + + + Sbjct: 117 YNCEPGDVITIKNPEKNKSIITKNINSFQRPKIPNHLVFDSTQFRGSVNKTIDR---EWI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLKINELLVVEYYSR 188 >gi|7576513|gb|AAF63869.1| ribosomal protein system 4 [Forsstroemia trichomitria] Length = 189 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ E R D +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + +L ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|269218536|ref|ZP_06162390.1| ribosomal protein S4 [Actinomyces sp. oral taxon 848 str. F0332] gi|269211647|gb|EEZ77987.1| ribosomal protein S4 [Actinomyces sp. oral taxon 848 str. F0332] Length = 197 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 9/201 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 + R +G L + + + R Y PG HG+ R + ++L+ KQ+++ YG I E + Sbjct: 2 RQSRSLGIALSPKAERYMQRRPYRPGEHGRGRTKDS-DYSVRLKEKQRLRAQYG-IREAQ 59 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 R +++EA R+ G + NL+ LE RLD +V RA F TI ARQ V HRH+LV+G+ V+ Sbjct: 60 MRRVWEEARRAEGLSGENLVELLEMRLDALVLRAGFARTIAQARQVVVHRHLLVDGKIVD 119 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSS 185 S+R K G ++VK +S+ A+Q A RD VP Y+ V+ + + T R P Sbjct: 120 RPSFRVKPGQTVQVKPRSQTSPQFHVAAQGAHRDVLPQVPGYLDVDLEKLRFTLTRRPKR 179 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + PVI +VVE YSR Sbjct: 180 AE---VPVICDVQMVVEHYSR 197 >gi|42556416|gb|AAS19803.1| small ribosomal protein 4 [Gottschea nuda] Length = 191 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRSGILPGLTSKTLKPKSSY---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R V TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMVTTIPGARQLVNHRHILINNNIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNNKKSQSMITRNLNLLQKFKIPNHLTFDSTQLQGLVNQ---RIHREF 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|11121139|emb|CAC14785.1| ribosomal protein subunit 4 [Hookeria lucens] Length = 190 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+ VN VNI S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGVNDCIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + ++ P +++ + RI L Sbjct: 117 YRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|59803320|gb|AAX07768.1| Rps4 [Symphyogyna undulata] Length = 189 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G L G + +RS +K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGA-LPGLSYEMIGSRSGYTNQLATNKK--ISQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD IV+R PTI ARQ VNHRH++VN +VNI SY Sbjct: 57 VRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVNDNAVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK DVI +K + + + + + L ER +P +++ + + +I Sbjct: 117 NCKPQDVITIKDRRESQSIITKNINLFRERKIPNHLTFDSTRFCGSVNQIIDR---EWIS 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|47606898|gb|AAT36369.1| ribosomal protein subunit 4 [Garovaglia subelegans] Length = 195 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + I RR+G K P S ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVXIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T + E+RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKTKGSTGEVSLQLPETRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 VNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|184128019|gb|ACC67909.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128035|gb|ACC67917.1| ribosomal protein small subunit 4 [Angiopteris rapensis] gi|184128059|gb|ACC67929.1| ribosomal protein small subunit 4 [Angiopteris sp. China] Length = 198 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 10/202 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 ++ RR+ + K+ + ++ Q K S + ++L AKQ+++ +G ++E+ Sbjct: 1 LRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V Sbjct: 58 QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPS 184 +I SYRCK D+I V+ ++ V + + +D +PE+++++ + RI + Sbjct: 118 DIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVT 177 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 RD---SIGLDINELLVVEYYSR 196 >gi|3098238|gb|AAC15567.1| small ribosomal protein 4 [Mniodendron dendroides] Length = 189 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|74273175|gb|ABA01287.1| ribosomal protein S4 [Passiflora galbana] gi|74273183|gb|ABA01291.1| ribosomal protein S4 [Passiflora mucronata] Length = 183 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRLVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|42718068|gb|AAS38456.1| rps4 [Brachymitrion cochabambae] Length = 189 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKTSQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|42794650|gb|AAS45722.1| Rps4 [Disterigma ovatum] Length = 211 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K Q KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFVKKKKXXXXXXXQ--EKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++ ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTXRQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ L S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIENSFQNLFDLPSRKRKRNRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|77019171|emb|CAH60191.1| chloroplast 30S ribosomal protein S4 [Grimmia fuscolutea] Length = 187 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + +++ +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|37992517|gb|AAR06437.1| small ribosomal protein 4 [Floribundaria aurea] Length = 190 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T + E R D +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVSLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|12642208|gb|AAK00186.1| rps4 [Diphyscium foliosum] Length = 189 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G +P + ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 RLGALPGLTIXTPQLKSNS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLLXY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ V+HRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVHHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RC D I +K++ K +++ L+++ +P +++ N +I L Sbjct: 117 RCXPQDFITIKERQKSQGIIVKNMDLSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|28194713|gb|AAO33618.1|AF480973_1 ribosomal protein S4 [Leptodontium flexifolium] Length = 190 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P + + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I S Sbjct: 57 YVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDCITINDRKKSQIMITKNIDFSQKSKIPHHLAFNSLEKKGLINQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|307828396|gb|ADN94996.1| small ribosomal protein 4 [Fossombronia truncata] gi|307828419|gb|ADN95007.1| small ribosomal protein 4 [Fossombronia truncata] Length = 189 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 1 RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 57 VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK GDVI V+ + K + + + L ++ P +++++ + + Sbjct: 117 SCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|15145840|gb|AAK83538.1| rps4 [Brachymitrion moritzianum] Length = 189 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLKKQGFINQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|12642212|gb|AAK00188.1| rps4 [Theriotia lorifolia] Length = 186 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 10/193 (5%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S K S + ++L KQK++ +YG I+E++ Sbjct: 1 LGALPGLTSKTPQLKSSSI-----NASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYV 54 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 55 RIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNERIVNIPSYH 114 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + +++ +++ +P +++ + ++ L + Sbjct: 115 CKPQDFITIKDRQKSQSIIVKNMDFSQKYKIPNHLTFDSLEKKGLVNQV---LDREYIGL 171 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 172 KINELLVVEYYSR 184 >gi|269991304|emb|CAX12488.1| 30S ribosomal protein S4 [Fucus vesiculosus] Length = 202 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + + KI +++GE L G + + ++ Q++++K S + ++L KQK++ Sbjct: 1 MVRYRGPRIKIIKKLGE-LPGLTRKAIKKKNV-----NQKKETKASAYKIRLNEKQKLRY 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG I+E + S KEA R +G T L+ LE RLD I++R PTI AARQ VNH H Sbjct: 55 NYG-ITESQLLSYVKEARRRKGLTGFLLMQLLEMRLDNIIFRLGLAPTIPAARQIVNHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ----LAERDVPEYISVNHDNMV 176 VL+N + VNI S++C+ D+I KSK + S L ++ ++ + ++ Sbjct: 114 VLINNKKVNIPSFQCRPKDIISFSSKSKTNNLLKINSSEPNHLTDKVSTSHLEFDKQSLT 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A + + + LV+E+YSR Sbjct: 174 AKINNLVNRKD---LRFKINDMLVIEYYSR 200 >gi|118577635|gb|ABL07183.1| small ribosomal protein 4 [Piper wichmannii] Length = 183 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 KAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 DIITTRNEQRSKVLVQNSMDFASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|146261549|gb|ABQ15084.1| ribosomal protein S4 [Aphanopetalum resinosum] Length = 184 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L K K++ +YG ++E++ A Sbjct: 1 LPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKXKLRFHYG-LTERQLLKYVHIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I K + K A + + ++P++++++ +I + + + Sbjct: 116 QDIITAKDQQKSRAXIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDNK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|7576661|gb|AAF63943.1| ribosomal protein system 4 [Plagiothecium cavifolium] Length = 190 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L LE R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLSQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|46486536|gb|AAS98704.1| ribosomal protein subunit 4 [Rhizogonium distichum] Length = 195 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGTLPGLTNKILQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLINQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|67035612|gb|AAY62737.1| small ribosomal protein subunit 4 [Dicranella heteromalla] Length = 190 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPRLTNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK D I +K + K A + + L+++ VP +++ N +I L Sbjct: 117 YHCKPQDFITIKDREKSQAMITKNVDLSQKYKVPNHLTFNFLEKKGLVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|125662716|gb|ABN50308.1| small ribosomal protein 4 [Ephedra sp. Tibet-5] Length = 206 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 14/211 (6%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60 S+ + KI RR+ K P + +H R K S + + L+ KQK++ Sbjct: 2 SRYRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175 +LVN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 117 ILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQN 176 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 KGIVNKIIDTKD---LQLKIKEMLVIEYYSR 204 >gi|184127927|gb|ACC67863.1| ribosomal protein small subunit 4 [Danaea nodosa] Length = 199 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ + K+ + S K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKLIRRLKDLPGLTMKTLKSKESQI--AMDPSASKKISQYCIRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R P+I AARQ VNHRH+LVN R Sbjct: 58 RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYIS---VNHDNMVATFVRIP 183 V+I SYRCK D+I V+ ++ + V + ++D +PE+++ + D +I Sbjct: 118 VDIPSYRCKPKDIINVRNQTNSHSLVKRNLESLDKDKIPEHLTLSLLEDDKPQGLVNKIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197 >gi|37992513|gb|AAR06435.1| small ribosomal protein 4 [Euptychium setigerum] Length = 194 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKIPQVKSGS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + + ++ +P +++ +I L Sbjct: 117 NIPSYRCKPQDXIIVKNXKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|63101021|gb|AAY33135.1| small ribosomal protein 4 [Pseudotaxiphyllum elegans] Length = 189 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSCLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|118577647|gb|ABL07189.1| small ribosomal protein 4 [Macropiper timothianum] Length = 183 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 KAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 DIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|307326779|ref|ZP_07605971.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113] gi|306887542|gb|EFN18536.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113] Length = 203 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K R +G L + R Y PG HG+ RK + S + ++L KQ+++ Y IS Sbjct: 6 PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRK-QTSDYKVRLLEKQRLRAQYD-IS 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ + A ++ G T L+ LE RLD +V R+ TI+ +RQ V H H+ VNGR Sbjct: 64 ERQMARAYDRARKAGGKTGEALVIELERRLDALVLRSGIARTIYQSRQMVTHGHIEVNGR 123 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183 V+ S+R + DV+ V+++S+ A + + + P Y+ VN + R P Sbjct: 124 KVDKPSFRVRPDDVVMVRERSRDKHPFQVAREGGYAPDGETPRYLQVNLMALAFRLDRDP 183 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + PVI LVVE+Y+R Sbjct: 184 NRKE---IPVICDEQLVVEYYAR 203 >gi|32401814|gb|AAP80895.1| small ribosomal protein 4 [Viburnum betulifolium] Length = 184 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + + + ++P++++++ +I S + + Sbjct: 116 RDIITARDEQNSRVLIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|58293889|gb|AAW69891.1| small ribosomal protein 4 [Leptodontiopsis fragilifolia] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTXKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Y Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPGY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LDRELID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|160942871|ref|ZP_02090110.1| hypothetical protein FAEPRAM212_00347 [Faecalibacterium prausnitzii M21/2] gi|158445772|gb|EDP22775.1| hypothetical protein FAEPRAM212_00347 [Faecalibacterium prausnitzii M21/2] gi|295103949|emb|CBL01493.1| SSU ribosomal protein S4P [Faecalibacterium prausnitzii SL3/3] Length = 200 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K + +G + G K S +G RK + Y QL+ KQK+ Sbjct: 1 MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNS-----NGNVRKKQSEY-ASQLKEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + EK+F + + +A+ G T NL+ +E RLD +V+R F T ARQ V+H Sbjct: 55 KFIYGVL-EKQFHNAYLKAESRPGKTGENLLQIMECRLDNVVFRLGFAQTRRDARQLVSH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176 H VNG+ VNI SY+ K GDVIEV++ S+ A + ++ +P +++ ++ Sbjct: 114 AHFTVNGKKVNIPSYQVKAGDVIEVRESSRSSAKFAKLTGAEAPVVALPAWLNRETGSLK 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P D+ Y V +L+VE YS+ Sbjct: 174 GVVAKLPER-SDIDYEVA--EHLIVELYSK 200 >gi|74273247|gb|ABA01323.1| ribosomal protein S4 [Malesherbia linearifolia] Length = 187 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 10/193 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRP----RAGSAFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD ++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAAKAKGPTGRVLLQLLEMRLDNTLFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K + K + + + +P++++++ +I S + Sbjct: 116 KPRDLITAKDEQKSKDMIQNSLDSFPQGGKLPKHLTLHPFQYKGLVNQIIDSK---WVGL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|80974164|gb|ABB53775.1| small ribosomal subunit protein 4 [Hampeella alaris] Length = 196 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K P + ++ K S + ++L KQK++ +YG I+E Sbjct: 1 RVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SYRCK D I VK + + +++ +P ++ + +I L Sbjct: 117 VNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIGLKINELLVVEYYSR 193 >gi|37992469|gb|AAR06413.1| small ribosomal protein 4 [Crossomitrium rotundifolium] Length = 194 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI AARQ VNHRH++VN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVVNDFLV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K K K + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKSQDFITIKNKKKSKTIISKNIEFYQKSKIPNHLTYNFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|12330558|gb|AAG52816.1| ribosomal protein 4 [Catagonium nitens] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++ G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRXARKAXGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKXQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|47606920|gb|AAT36380.1| ribosomal protein subunit 4 [Pterogonium gracile] Length = 200 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 13 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 68 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 69 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 128 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ N +I L + Sbjct: 129 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIGL 185 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 186 KINELLVVEYYSR 198 >gi|20531083|gb|AAM27363.1| ribosomal protein 4 [Diphyscium mucronifolium] Length = 186 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 ALPGLTSKTPQLR---ASSINQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 ARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K +++ +++ +P +++++ +I L + + Sbjct: 117 PQDFITIKDRQKSQDIIVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|63101019|gb|AAY33134.1| small ribosomal protein 4 [Heterophyllium affine] Length = 190 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHLLVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|42405292|gb|AAS13472.1| rps4 small ribosomal protein [Benitotania elimbata] Length = 193 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 8/198 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 KIIRRLGVLPGLTNKIPQVKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD ++++ TI ARQ VNHRH+LVN V+ Sbjct: 57 LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFQLGMATTIPGARQLVNHRHILVNNFIVD 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + K + + ++ ++ +P +++ + +I L Sbjct: 117 IPSYRCKPQDFITIKNQRKSEVIINKNTEFYKKYKIPNHLTYSSLEKKGLVNKI---LDR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESIGLKINELLVVEYYSR 191 >gi|37548849|gb|AAO32693.1| ribosomal protein 4 [Oligotrichum hercynicum] Length = 187 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K + I +K + + A + +++ +P +++ N +I L + Sbjct: 117 KPQEFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|58293879|gb|AAW69886.1| small ribosomal protein 4 [Ulota phyllantha] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---VNQSTSNRKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNH H++VN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHXHIIVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTXNSXEKKGFVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|118577631|gb|ABL07181.1| small ribosomal protein 4 [Piper yinkiangense] Length = 184 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 RDIITTRNEQRSKVLVPNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|22854727|gb|AAN09783.1| small ribosomal protein 4 [Oreas martiana] Length = 185 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 58 KAKGSTGKVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I VK + K A +++ +++ VP +++ N +I L + + Sbjct: 118 DFITVKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|15145836|gb|AAK83536.1| rps4 [Voitia nivalis] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSST---NQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R V I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVXIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFSQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYS 205 + + LVVE+YS Sbjct: 174 LKINELLVVEYYS 186 >gi|12330530|gb|AAG52802.1| ribosomal protein 4 [Thelia asprella] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETVISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|74273105|gb|ABA01252.1| ribosomal protein S4 [Passiflora kawensis] Length = 183 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P++++++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLHRSQYKGSVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|42718086|gb|AAS38465.1| rps4 [Tayloria dubyi] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKAPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRVARKAKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ VP ++ N +I L Sbjct: 117 RCKPQDSITIKDRQKSQTIINKNIEFNQKYKVPNHLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|50235352|gb|AAT70709.1| Rps4 [Brachythecium appleyardiae] Length = 193 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 SIGLKRNELLVVEYYSR 190 >gi|328488168|gb|AEB19897.1| small ribosomal protein 4 [Paraschistochila conchophylla] Length = 191 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+ SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRSGVLPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ N + + Sbjct: 117 SYNCELGDIIAIKNKQKSESMITRNLNLLQKFKIPNHLTFNSTQLQGLVNQKIHR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INFKINELLVVEYYSR 189 >gi|126643072|ref|YP_001086056.1| 30S ribosomal protein S4 [Acinetobacter baumannii ATCC 17978] Length = 140 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 4/143 (2%) Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 + E++F + +KEA R +G T NL+ LESRLD +VYR F T ARQ V+HR + +N Sbjct: 1 MLERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQLVSHRSITLN 60 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIP 183 GR VNI S + K GDVI V + +KQ + A +L A+R +P +I V+H + TF P Sbjct: 61 GRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIEVDHSKLEGTFKAAP 120 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 P + +L+VE YS+ Sbjct: 121 DRSD---LPAEINESLIVELYSK 140 >gi|307828390|gb|ADN94993.1| small ribosomal protein 4 [Fossombronia alata] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 1 RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 57 VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK GDVI V+ + K + + + L ++ P +++++ + + + Sbjct: 117 SCKPGDVITVRNRHKSQSIIAKNMSLFQKPRTPNHLTLDSTRLRGSINQTIDRD---WIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|293633991|gb|ADE60375.1| ribosomal protein subunit 4 [Notoligotrichum angulatum] Length = 188 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+ Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992529|gb|AAR06443.1| small ribosomal protein 4 [Garovaglia powellii var. brevifolia] gi|37992533|gb|AAR06445.1| small ribosomal protein 4 [Garovaglia subelegans] Length = 194 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E R D I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGGINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37683572|gb|AAQ98837.1| small ribosomal protein 4 [Pogonatum pergranulatum] Length = 187 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + + L KQK++ +YG I+E++ + + Sbjct: 1 GAXPGLTNKTPQLKSGY---INQTVSNKKISQYRIALEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + + + +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKNRQESQTIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|32892114|gb|AAP88996.1| ribosomal protein S4 [Passiflora villosa] gi|74273221|gb|ABA01310.1| ribosomal protein S4 [Passiflora reflexiflora] Length = 183 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE R D I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRWDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|12642214|gb|AAK00189.1| rps4 [Bryoxiphium norvegicum] Length = 186 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 ALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 ARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K A +++ +++ VP +++ N +I L + + Sbjct: 117 PQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDRESINLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|7576529|gb|AAF63877.1| ribosomal protein system 4 [Lepyrodon pseudolagurus] Length = 190 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T + E RLD +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARRAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNVYMVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|63191801|gb|AAY34860.1| small ribosomal protein subunit 4 [Bryoerythrophyllum campylocarpum] Length = 191 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S + K S + ++L KQK++ +YG I+EK+ Sbjct: 1 IRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITEKQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|254391328|ref|ZP_05006532.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064] gi|294811568|ref|ZP_06770211.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064] gi|326440047|ref|ZP_08214781.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064] gi|197705019|gb|EDY50831.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064] gi|294324167|gb|EFG05810.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064] Length = 205 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K R +G L + R Y PG HG+ RK Y ++L KQ+++ Sbjct: 1 MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 Y +ISE++ + A ++ G T L+ LE RLD ++ R+ TI+ ARQ V H H Sbjct: 60 QY-NISERQMARAYDRARKAEGKTGEALVVELERRLDALLLRSGIARTIYQARQMVVHGH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177 + VNG V+ S+R + DV+ V+++S+ + A + A+ + P Y+ VN + Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVMVRERSRAKSLFQVAREGGFAADGETPRYLQVNLKALAF 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFY 204 R P + PVI LVVE+Y Sbjct: 179 RMDRDPQRKE---IPVICDEQLVVEYY 202 >gi|146261555|gb|ABQ15087.1| ribosomal protein S4 [Corylopsis pauciflora] Length = 185 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----RTGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYIRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 AGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPGARQLVNHRHILVNGRIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + + K A + + ++P++++++ +I S + + Sbjct: 116 PRDIITARDEQKSTALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|29422387|gb|AAO84589.1| small ribosomal protein 4 [Fleischerobryum longicolle] Length = 190 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++ KQK++ +YG I+E++ + Sbjct: 1 RRLGAXPGLTNKTPQLKSSX---INQSTFNKKISQYRIRXEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNARIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|47606944|gb|AAT36392.1| ribosomal protein subunit 4 [Rhizogonium novae-hollandiae] Length = 195 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 1 RVRIIRRLGILPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNINFYQKYKIPNHLIYNSLEKKGLVNQI---L 173 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DRESIDLKINELLVVEYYSR 193 >gi|15145856|gb|AAK83546.1| rps4 [Tayloria hornschuchii] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRLVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRLKSQAIINKNIEFHQKYKIPNHLTYNSVKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|293634041|gb|ADE60400.1| ribosomal protein subunit 4 [Pogonatum macrophyllum] Length = 187 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRELIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|157689558|gb|ABV65335.1| ribosomal protein S4 [Stachyurus praecox] Length = 185 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----RSVSDLRNQSRPVKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 56 AGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + + K + + ++P+++++ +I S + + Sbjct: 116 PQDIITARNEQKSRTLIQNYLDSSPHEELPKHLTLPPFQYKGLVNQIIDSK---WVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|3098222|gb|AAC15559.1| small ribosomal protein 4 [Orthotrichum lyellii] gi|58293881|gb|AAW69887.1| small ribosomal protein 4 [Ulota hutchinsiae] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|26454646|sp|O47032|RR4_PROWI RecName: Full=Plastid 30S ribosomal protein S4 gi|5748666|emb|CAB53104.1| 30S ribosomal protein S4 [Prototheca wickerhamii] Length = 207 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 15/213 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54 MS+ + I RR+GE L G K ++ PG HG ++K SK S +G++L+ Sbjct: 1 MSRYRGPRLPIIRRLGE-LPGFSKK-IDRNHTPPGQHGWKKKASDQKKSKESQYGIRLKE 58 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++ YG I+E++ + +EA R +G T L+ LE RLD I+YR F PTI AARQ Sbjct: 59 KQKLRYNYG-INERQLINYVREARRRKGSTGEVLLQLLEMRLDNIIYRLGFAPTIPAARQ 117 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173 +NH H+ VN +++NI SY CK D+I V + Q ++ +++N + Sbjct: 118 LINHGHINVNNKNINIPSYICKINDIISV--LKNSQQLIKNYLQNGGISELSTCLNLNKE 175 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A+ I + + LV+E+YSR Sbjct: 176 KLEASINNIIPRD---LVKLEINELLVIEYYSR 205 >gi|157689406|gb|ABV65259.1| ribosomal protein S4 [Ailanthus altissima] Length = 186 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I + K A + + ++P++++++ +I S + Sbjct: 116 KPRDIITARDDHKSRALIQNYLDSSHHEELPKHLTLHAFQYKGLVNQIIDSK---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVV +YSR Sbjct: 173 INELLVVXYYSR 184 >gi|12330522|gb|AAG52798.1| ribosomal protein 4 [Weissia ludoviciana] Length = 189 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576601|gb|AAF63913.1| ribosomal protein system 4 [Zelometeorium patulum] Length = 190 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 SYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|37992715|gb|AAR06536.1| small ribosomal protein 4 [Trachypus bicolor var. viridulus] Length = 189 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + ++I L Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVIQI---LDRESVS 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576517|gb|AAF63871.1| ribosomal protein system 4 [Neckera pennata] Length = 190 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + +L ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|33411990|emb|CAD86725.1| ribosomal protein small subunit 4 [Archidium sp. CCRU] Length = 185 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTFELKSNSVNQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + V++ +++ VP ++++N +I L + + + Sbjct: 118 DFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---LNNESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|42556434|gb|AAS19812.1| small ribosomal protein 4 [Jubulopsis novae-zelandiae] Length = 192 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLSSKKLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ +N +V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISINNETVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ + K + + + + ++P ++++N + + Sbjct: 117 SYNCEPGDIITIRNREKSQSIITKNLNSFHKSEIPNHLTLNSTQLRGSINTTIHR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKVNELLVVEYYSR 189 >gi|18920777|gb|AAL82433.1| ribosomal protein system 4 [Plagiothecium piliferum] Length = 191 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 4 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 59 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 60 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 119 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + ++ +P +++ + +I L + Sbjct: 120 CKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 176 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 177 KINELLVVEYYSR 189 >gi|168186545|ref|ZP_02621180.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund] gi|169295481|gb|EDS77614.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund] Length = 196 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 7/187 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+K + K+ RR+G N++G PK+ + GL G+R+K +G QL KQK++ Sbjct: 1 MAKMRQPRFKLSRRLGVNIYGHPKAMKRSE----GLKGRRKKMS--DYGSQLLEKQKVRA 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+FR ++A +S+ T L+ LE RLD +VYR F +I ARQ VNH H Sbjct: 55 YYG-VMEKQFRRYVEKAMKSKDVTGDILLKLLECRLDNLVYRIGFANSIRQARQMVNHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG V+I SY K GD +E+K+K ++ YI ++DN + Sbjct: 114 ILVNGSKVDIPSYEVKVGDKVELKEKYRKNEMFFNNFLELRTFELPYIEKDYDNFSGKLI 173 Query: 181 RIPSSLK 187 R+P+ + Sbjct: 174 RMPNREE 180 >gi|58293905|gb|AAW69899.1| small ribosomal protein 4 [Sehnemobryum paraguense] Length = 189 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSPA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN R VNI SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTISGARQLVNHRHIIVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNINFNQKYKIPNHLTYNSLEKKGFVNQI---LDRELIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|20531117|gb|AAM27379.1| ribosomal protein 4 [Streptopogon calymperes] Length = 191 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLSNKIPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R TI ARQ V+HRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVSHRHILVNDRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I + + K + + +++ +P ++ N +I L Sbjct: 117 SYRCKPQDFITISDRKKSQVIITKNVDSSQKSKIPNHLIFNSLEKKGLINQI---LNQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|37992671|gb|AAR06514.1| small ribosomal protein 4 [Sauloma tenella] Length = 194 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 LRIIRRLGVLPGLSNKVPQLRSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITEQ 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K++ K A + + + ++ +P +++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKKQRKSEAIINKNIEFYQKYKIPNHLTYNFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|32401757|gb|AAP80867.1| small ribosomal protein 4 [Zamia pumila] Length = 190 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 9/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K P Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLRVLPGLTNKRP----KSINDPTNQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLL 55 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I Sbjct: 56 KYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIP 115 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK DVI V+ + + A + + L+++D +P +++++ +I S Sbjct: 116 SYRCKPRDVITVRDQQRSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---W 172 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 ISLKINELLVVEYYSR 188 >gi|293634053|gb|ADE60406.1| ribosomal protein subunit 4 [Pogonatum subulatum] Length = 187 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A +++ +++ +P +++ N +I L + Sbjct: 117 KPKDFIIIKNQQESQAIIVKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|145848879|emb|CAJ91116.1| ribosomal protein S4 [Acrocladium auriculatum] Length = 188 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNXKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K K K A + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|74273191|gb|ABA01295.1| ribosomal protein S4 [Passiflora serratifolia] Length = 183 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLKEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ +I S + + Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSKR---VGLQ 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|157785978|gb|ABV74163.1| small ribosomal protein 4 [Cyathophorum parvifolium] Length = 191 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V+I Sbjct: 57 NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRESETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LNRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|146261571|gb|ABQ15095.1| ribosomal protein S4 [Kalanchoe daigremontiana] Length = 186 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLSLASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K K A + ++P++++++ +I S + Sbjct: 116 KPSDIITAKDDKKSRALIQNYIDSIPHEELPKHLTLHPFQYKGLVNQIIDSK---GVGLK 172 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 INELLVVEYYSR 184 >gi|157689444|gb|ABV65278.1| ribosomal protein S4 [Cephalotus follicularis] Length = 185 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P G Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----RTGSAFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLFKYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 56 AGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRHILVNGHIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + K A + A ++P+++++ +I S + + Sbjct: 116 PRDIITATDEQKSRALIQNYLDSSAHEELPKHLTLQPLQYKGLVNQIIDSK---WVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|42556428|gb|AAS19809.1| small ribosomal protein 4 [Hymenophyton flabellatum] Length = 191 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L G + +S +K S + ++L KQK++ +YG ++E++ Sbjct: 3 LGA-LPGLSNKMLELKSGYTNQSTANKK--ISQYRIRLEEKQKLRFHYG-LTERQLLKYV 58 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD IV+R PTI ARQ VNHRH+ +N V+I SY Sbjct: 59 RIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIPINDDMVDIPSYN 118 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK DVI + + K + L ++ +P +++ + + ++ + Sbjct: 119 CKPEDVITTRNRRKSQLIITRNINLFQKQKIPNHLTFDSTQFRGSVNQMIDR---ECINL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 KINELLVVEYYSR 188 >gi|37992561|gb|AAR06459.1| small ribosomal protein 4 [Hypnella pallescens] Length = 199 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI RR+G K P S + K S + ++L KQK++ +YG Sbjct: 1 YRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++V Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N VNI SYRCK D I +K + K V + + ++ +P +++ N +I Sbjct: 117 NNNIVNIPSYRCKPQDFITIKNQGKSDTIVSKNIEFYQKIKIPNHLTYNFLEKKGLIKQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197 >gi|12330516|gb|AAG52795.1| ribosomal protein 4 [Archidium alternifolium] Length = 189 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S +L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTSELKSSS---VNQSTSNXKISQXRXRLEEKQKLRXHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + V++ +++ VP ++++N +I ++ Sbjct: 117 RCKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQIXNND---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|22854725|gb|AAN09782.1| small ribosomal protein 4 [Mesotus celatus] Length = 188 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSGS---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ VP +++ + +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|29027174|gb|AAN47149.1| small ribosomal protein 4 [Hymenodontopsis mnioides] Length = 188 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKDRQKSQAIIGKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|118577546|gb|ABL07139.1| small ribosomal protein 4 [Peperomia obtusifolia] Length = 183 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 5/185 (2%) Query: 23 PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82 P P L Q R K S + ++L KQK++ +YG + E++ + A +++G Sbjct: 1 PGLPSKRPVSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAGKAKG 59 Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 T H L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK D+I Sbjct: 60 STGHVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRCKPRDIIT 119 Query: 143 VKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201 + K V + A R ++P+++++ +I S + + LVV Sbjct: 120 TRNAQKSKVLVQNSMDSASREELPKHLTLESSQYKGIVNQIIDSK---WVGLKINELLVV 176 Query: 202 EFYSR 206 E+YSR Sbjct: 177 EYYSR 181 >gi|37992411|gb|AAR06384.1| small ribosomal protein 4 [Aerobryidium aureonitens] Length = 189 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37992421|gb|AAR06389.1| small ribosomal protein 4 [Aerolindigia capillacea] Length = 190 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D + +K K K + + +L ++ +P +++ + +I L Sbjct: 117 YRCKPQDFVTIKNKRKSENIISKNMELYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|118577544|gb|ABL07138.1| small ribosomal protein 4 [Peperomia hoffmannii] Length = 184 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K PV+ S L Q R K S + ++L KQK++ +YG + E++ + A Sbjct: 1 LPGLTSKRPVSESS----LRSQPRYGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNG V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + K V + A R ++P++++++ +I +S + + Sbjct: 116 RDIITTRNAQKSKVLVQNSMYSASREELPKHLTLDSSQYKGIVNQIINSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|157689530|gb|ABV65321.1| ribosomal protein S4 [Ochna mossambicensis] Length = 182 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P G L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRP----RAGSDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAAK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 56 AKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I + + K A + + + ++P++++++ +I S + + Sbjct: 116 IITARDEQKSRAMIQNYLDSSPQEELPKHLTLHTFQYKGLVNQIIDSR---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|42794726|gb|AAS45758.1| Rps4 [Thibaudia pachyantha] Length = 211 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG--LQLRAKQKM 58 MS+ + K RR+G K P G Q R + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVEKKKXXXXIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + ++ G T L+ L RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIPGKAXGSTGQVLLQLLXMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I YRCK D+I ++KS+ S L R VP +++ N Sbjct: 116 RHVLVNGRIIDIPRYRCKPRDIIXAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTXN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|42718064|gb|AAS38454.1| rps4 [Brachymitrion immersum] Length = 189 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L+ KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKTSQYRIRLKEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|11121222|emb|CAC14796.1| ribosomal protein subunit 4 [Mielichhoferia macrocarpa] Length = 190 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 YRCKLEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKNKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|328541072|gb|AEB21760.1| ribosomal protein S4 [Paracromastigum macrostipum] Length = 184 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 +PKS N RS K S + ++L KQK++ +YG ++E++ + A R+ Sbjct: 8 LKPKSSYNDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQSLKYVRIARRA 58 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY C+ GD+ Sbjct: 59 KGSTGQVLLQSLEMRLDNTIFRLGMASTIPGARQLVNHRHIAINNNIVDIPSYNCQPGDI 118 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I ++ K + + + + L + +P +++ + + + + + + + L Sbjct: 119 ITIRDKQRSQSIITKNVNLFQNLKIPSHLTFDSTKLCGSINQTINR---EWIDLKINELL 175 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 176 VVEYYSR 182 >gi|157689566|gb|ABV65339.1| ribosomal protein S4 [Suriana maritima] Length = 182 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P G L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 56 AKGSTGQVLLQLLEMRLDNIIFRLGMASTIPQARQLVNHRHILVNGRMVDIPSYRCKPQD 115 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I + + K A + R ++P++++++ +I S + + Sbjct: 116 IITPRDEQKSRALLQNYLDSPPREELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|50299387|gb|AAT73598.1| small ribosomal protein 4 [Plagiochila renitens] Length = 188 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNHDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDLTQLQGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWINLKINELLVV 188 >gi|12330494|gb|AAG52784.1| ribosomal protein 4 [Orthotrichum alpestre] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNH+H++VN R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D + +K + K + + ++ +P +++ N +I Sbjct: 117 RCKPQDFLTIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|22854709|gb|AAN09774.1| small ribosomal protein 4 [Holomitrium borbonicum] Length = 186 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTPQLKSGSINQ--STSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ + +I L + + Sbjct: 119 DFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|7576655|gb|AAF63940.1| ribosomal protein system 4 [Hypopterygium tamarisci] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNG V+I S Sbjct: 57 YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNGYIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LNRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|12330492|gb|AAG52783.1| ribosomal protein 4 [Orthotrichum anomalum] gi|58293877|gb|AAW69885.1| small ribosomal protein 4 [Orthotrichum jetteae] gi|58293895|gb|AAW69894.1| small ribosomal protein 4 [Muelleriella crassifolia] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNH+H++VN R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|32401797|gb|AAP80887.1| small ribosomal protein 4 [Platanus x acerifolia] Length = 193 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 KSP G L Q R K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 13 LTTKSP----KAGSDLRNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 67 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+ Sbjct: 68 KGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDI 127 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I + + K A + + ++P++++++ +I S + + L Sbjct: 128 ITTRDEQKSRALIQNYLDSSSHEELPKHLTLHSFQYKGLVNQIIDSK---WVGLQINELL 184 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 185 VVEYYSR 191 >gi|42556512|gb|AAS19851.1| small ribosomal protein 4 [Trichotemnoma corrugatum] Length = 187 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ SY + K S + ++L KQK++ ++G ++E++ + Sbjct: 1 GALPGLTSKTLKPKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHHG-LTERQLLKYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE R D ++R TI ARQ VNHRH+ ++ V+I SY C Sbjct: 57 IARKAKGSTGQVLLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHISIDNDIVDIPSYNC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 + G++I VK K K + + + L ++ +P +++ + + + S + Sbjct: 117 EPGNIITVKNKQKSQSIIAKNIDLFQKSKIPSHLTFDSTKLQGFVNQTISR---ELVNLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|37992531|gb|AAR06444.1| small ribosomal protein 4 [Dichelodontium nitidum] Length = 194 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKLIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E R D I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGGINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|33413177|emb|CAD86724.1| ribosomal protein small subunit 4 [Tridontium tasmanicum] Length = 192 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 LIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRHVLVN R V+I Sbjct: 57 LNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVLVNNRIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 PSYRCKPQDFITINNRKKSQVMIAKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINELLVVEYYSR 190 >gi|67035945|gb|AAY62899.1| small ribosomal protein subunit 4 [Dozya japonica] Length = 194 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G ++ S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNRTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E R D +++R PTI ARQ VNH+HVL+N V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHKHVLINDSMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYR K D I +K + K + + +L ++ +P +++ N +I L Sbjct: 117 DIPSYRRKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|67035849|gb|AAY62851.1| small ribosomal protein subunit 4 [Sematophyllum demissum] Length = 191 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNFLEKKGLINQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|3098236|gb|AAC15566.1| small ribosomal protein 4 [Mniodendron camptotheca] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ ++ ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTAQLKSNF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ ++ +I L Sbjct: 117 RCKPQDFITIKDRQKSQTIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|67035875|gb|AAY62864.1| small ribosomal protein subunit 4 [Brotherella recurvans] Length = 192 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I R+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IICRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L E RLD +++R TI ARQ VNHRH+LVN V+I Sbjct: 57 LNYVRIARKAKGSTGEVLSQLPEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCMVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ N +I Sbjct: 117 PSYRCKPQDFITIKNQRKSETMISKNIEFYQKYKIPNHLTYNSLENKGLVNQIVDR---E 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LIGLKINELLVVEYYSR 190 >gi|12330500|gb|AAG52787.1| ribosomal protein 4 [Zygodon viridissimus] gi|58293885|gb|AAW69889.1| small ribosomal protein 4 [Zygodon inermis] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R+V+I Y Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRTVDIPGY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIEFYQKNKIPNHLTYNSLEKKGFINQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|86438894|emb|CAJ55423.1| small ribosomal protein 4 [Plagiochila fusca] Length = 183 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 5/187 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRSARRAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I +K K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIIAIKNKEKSRSIVTKNINSFQKFKIPSHLTFDSTELRGSV 176 Query: 180 VRIPSSL 186 ++ + Sbjct: 177 NQMINRE 183 >gi|118577601|gb|ABL07166.1| small ribosomal protein 4 [Piper methysticum] Length = 182 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D Sbjct: 56 AKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I + + + V + A R ++P++++++ +I S + + Sbjct: 116 IITTRNEQRSKVLVQNSMDFASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|20531075|gb|AAM27359.1| ribosomal protein 4 [Diphyscium perminutum] Length = 185 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 10/192 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S K S + ++L KQK++ +YG I+E++ + Sbjct: 1 GALPGLTNKTPQLKSSSI-----NASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVR 54 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 55 IARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHILVNERIVNIPSYRC 114 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K +++ +++ +P +++ + +I L + Sbjct: 115 KPQDFITIKDRQKSQNIIVKNMDFSQKYKIPNHLTFDSLEKKGLVNQI---LDRESIGLK 171 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 172 INELLVVEYYSR 183 >gi|307828375|gb|ADN94986.1| small ribosomal protein 4 [Fossombronia altilamellosa] Length = 187 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 3 LPGLTDRTIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRIAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 60 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + ++ L ++ P +++++ + + + + + Sbjct: 120 DVITVRNRHKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|184127955|gb|ACC67877.1| ribosomal protein small subunit 4 [Marattia salicina] gi|184127961|gb|ACC67880.1| ribosomal protein small subunit 4 [Marattia sambucina] gi|184127969|gb|ACC67884.1| ribosomal protein small subunit 4 [Marattia mertensiana] gi|184127971|gb|ACC67885.1| ribosomal protein small subunit 4 [Marattia pellucida] gi|184127975|gb|ACC67887.1| ribosomal protein small subunit 4 [Marattia smithii] gi|184127991|gb|ACC67895.1| ribosomal protein small subunit 4 [Marattia fraxinea] gi|184127997|gb|ACC67898.1| ribosomal protein small subunit 4 [Marattia melanesica] gi|184127999|gb|ACC67899.1| ribosomal protein small subunit 4 [Marattia melanesica] Length = 199 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ + K+ + ++ Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQPASKKISQYCIRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLKHVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183 V+I SYRCK D+I V+ ++ V + + +D +PE+++++ + RI Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197 >gi|42556486|gb|AAS19838.1| small ribosomal protein 4 [Pleurozia gigantea] Length = 191 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ SY L K S + ++L KQK++ +YG ++E++ Sbjct: 2 RRLGALPGLTNKTLKLKSSY---LDRSMSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A + +G T L+ LE RLD ++R V TI ARQ VNHRH+L+N V+I S Sbjct: 58 YVRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVSTIPGARQLVNHRHILINDNIVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ GDVI +K K + + + +R +P ++ ++ + Sbjct: 118 YNCEPGDVIAIKNPEKNQSIITKNMNSFQRPKIPNHLVLDSTQFRGLVNKTIDR---EWV 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVEFYSR Sbjct: 175 DLKINELLVVEFYSR 189 >gi|12330496|gb|AAG52785.1| ribosomal protein 4 [Ulota crispa] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH++VN R V+I Y Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHRIVDIPXY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|63191749|gb|AAY34834.1| small ribosomal protein subunit 4 [Groutiella tomentosa] Length = 191 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P R ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGALPGLTNKTP---RLKSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 SYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDREL 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|48527397|gb|AAT45831.1| small ribosomal protein 4 [Plagiochila patriciae] Length = 178 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSSLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQALLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + + +R +P ++ + + + Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176 Query: 180 VR 181 + Sbjct: 177 NQ 178 >gi|63191751|gb|AAY34835.1| small ribosomal protein subunit 4 [Macromitrium levatum] Length = 194 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGSTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNYRMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 DIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RELIGLKINELLVVEYYSR 192 >gi|37992459|gb|AAR06408.1| small ribosomal protein 4 [Chaetomitrium dusenii] Length = 194 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 3 LIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 58 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 59 LNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 118 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + + ++ +P +++ + I L Sbjct: 119 PSYRCKPQDFITIKNRQKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNEI---LDRE 175 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 SIGLKINELLVVEYYSR 192 >gi|118577639|gb|ABL07185.1| small ribosomal protein 4 [Macropiper latifolium] Length = 182 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D Sbjct: 56 AKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I + + + V + A R ++P++++++ +I S + + Sbjct: 116 IITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|145848881|emb|CAJ91117.1| ribosomal protein S4 [Acrocladium auriculatum] Length = 188 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K K K A + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|29027242|gb|AAN47183.1| small ribosomal protein 4 [Hymenodontopsis stresemannii] Length = 199 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 13/204 (6%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGALPGSTNKTPQLK---YNSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHKHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVRI 182 +I SYRCK D I +K + K A + + D +P +++ + +I Sbjct: 117 DIPSYRCKPQDFITIKNRQKYQAIINKNIDSKNIDFSQKYKIPNHLTYSFLEKKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 L + + L+VE+YSR Sbjct: 177 ---LDRESIDLKINELLIVEYYSR 197 >gi|74273107|gb|ABA01253.1| ribosomal protein S4 [Passiflora lindeniana] Length = 183 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQFVNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQFVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++ + I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEQLPKHLTFHRFQYKGLVNEIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|37992523|gb|AAR06440.1| small ribosomal protein 4 [Garovaglia binsteadii var. mirabilis] Length = 194 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLPGLTNKVPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T + E R D I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLPNYVRIARKTKGSTGEVSLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|290487080|gb|ADD29924.1| ribosomal protein S4 [Rhododendron simsii] Length = 208 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 12/212 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+ K P + +RK S + ++L+ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLRALPGLTNKRPKPRNARRTQSRFVKRK--KSKYCIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMALTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------DVPEYISVNHDN 174 VLVNGR ++I SYRCK D+I + + K A + + R +P ++++ Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITARDERKSRALIQNSFDSLRRRKKFKFKLPNHLTLYRIQ 177 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + VVE+YSR Sbjct: 178 YKGLVNQIIDSK---WVGLKINQMRVVEYYSR 206 >gi|184127967|gb|ACC67883.1| ribosomal protein small subunit 4 [Marattia squamosa] Length = 199 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+ + K+ + ++ Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQPASKKISQYCIRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLKHVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183 V+I SYRCK D+I V+ ++ V + + +D +PE+++++ + RI Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKTQGFVNRIV 177 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197 >gi|146261559|gb|ABQ15089.1| ribosomal protein S4 [Daphniphyllum sp. 205-82] Length = 184 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RAISDLRKQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD ++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + K A + + ++P++++++ +I S + + Sbjct: 116 RDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|7576553|gb|AAF63889.1| ribosomal protein system 4 [Brachythecium austroglareosum] gi|7576555|gb|AAF63890.1| ribosomal protein system 4 [Brachythecium salebrosum] Length = 188 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576639|gb|AAF63932.1| ribosomal protein system 4 [Pilotrichum fendleri] Length = 190 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGVLPGLTNKIPQLK---ASSITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN V+I Sbjct: 57 NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHIVVNDYIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + +L ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIELYQKFKIPNHLTYSSLEKKGLINQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|78102677|gb|ABB21552.1| small ribosomal protein 4 [Plagiochila junghuniana] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQVLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I + K K A V + ++ +P +++ + + + ++ Sbjct: 117 VDIPSYNCKPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMIXR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINEVLVVE 189 >gi|140083435|gb|ABO84829.1| ribosomal protein S4 [Pulchrinodus inflatus] Length = 187 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A + + ++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQKSQAIITKNIDFYQKYKIPNHLTYNSLKKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|20531071|gb|AAM27357.1| ribosomal protein 4 [Theriotia kashmirensis] Length = 189 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G ++P S K S ++L KQK++ +YG I+E++ Sbjct: 1 MRRLGALPGLTSQTPQLKSSSI-----NASXKKISQDRIRLEEKQKLRFHYG-ITERQLL 54 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 55 KYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNERIVNIP 114 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK D I +K + K + +++ +++ P +++ + ++ L Sbjct: 115 SYHCKPQDFITIKDRQKSQSIIVKNMDFSQKYKTPNHLTFDSLEKKGLVNQV---LDRES 171 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 172 IGLKINXLLVVEYYSR 187 >gi|118577569|gb|ABL07150.1| small ribosomal protein 4 [Piper dilatatum] Length = 185 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P + S L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRPRSESS----LRSQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 AGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + + + V + A R ++P++++++ +I + + + Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDNK---GVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|212697279|ref|ZP_03305407.1| hypothetical protein ANHYDRO_01847 [Anaerococcus hydrogenalis DSM 7454] gi|325848945|ref|ZP_08170455.1| ribosomal protein S4 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675728|gb|EEB35335.1| hypothetical protein ANHYDRO_01847 [Anaerococcus hydrogenalis DSM 7454] gi|325480589|gb|EGC83651.1| ribosomal protein S4 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 197 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + S + RS ++ K S +G+Q R KQK K Sbjct: 1 MAVSRDPIFKRCRSLGISPAYLGYSGESKRSN------SNQRRKLSEYGMQQREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FRS +++A + G T NLI E RLD I +R+ T ARQ V H H Sbjct: 55 IYG-VSEKQFRSYYEKASKMHGQTGENLIILCERRLDNIAFRSGLARTRREARQVVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +L+NG+SV+I S KEGDVIEV++KS+ + + + ++ + +N+ Sbjct: 114 LLLNGKSVDIPSILVKEGDVIEVREKSRSSQLFKAIKETNQSFGIVSWLDSDLENLKVKV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+ +D+ PV + ++VEFYS+ Sbjct: 174 TNFPTR-EDIDIPV--EERMIVEFYSK 197 >gi|37992435|gb|AAR06396.1| small ribosomal protein 4 [Bryobrothera crenulata] Length = 190 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQKKSEVIINKNMEFYQKSKIPNHLTYSSLEKKGLVXQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|3098144|gb|AAC15520.1| small ribosomal protein 4 [Timmia sibirica] Length = 184 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 8/191 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A +++ +++ VP +++ N +I L Sbjct: 117 RCKPQDFIXIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEF 203 + + LVVE+ Sbjct: 174 LKINELLVVEY 184 >gi|157689506|gb|ABV65309.1| ribosomal protein S4 [Juglans nigra] Length = 180 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G + Q R SK S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 3 KRPKAGSDVRNQSRSSKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 61 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 62 LLQLLEMRLDNILFRLGMTSTIPQARQLVNHRHILVNGRIVDIPSYRCKPQDIITARDEQ 121 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 K A + + R ++P++++++ +I S + + LVVE+YSR Sbjct: 122 KSRALIQNYLDSSPREELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 178 >gi|32401787|gb|AAP80882.1| small ribosomal protein 4 [Abies homolepis] Length = 191 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K P Y + K S + ++L KQK++ +YG ++E++ Sbjct: 3 RRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I S Sbjct: 58 YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK D+I ++ + + A + + L +RD+ P +++ N +I S Sbjct: 118 YPCKPQDIITIRDQQRLRAIIRKNIDLFQRDILPNHLTFNSLQYKGFINQIIDSK---WI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 SLKINELLVVEYYSR 189 >gi|12330462|gb|AAG52768.1| ribosomal protein 4 [Tetraphis geniculata] Length = 189 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 2 LGVLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 58 RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + +++ +P ++++N ++ L + Sbjct: 118 CKPQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LDREFIDL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|313112851|ref|ZP_07798497.1| ribosomal protein S4 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624756|gb|EFQ08065.1| ribosomal protein S4 [Faecalibacterium cf. prausnitzii KLE1255] Length = 200 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 14/210 (6%) Query: 1 MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M+K K + +G + G K S G + K S + QL+ KQK+ Sbjct: 1 MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNSNG------NMRKKQSEYASQLKEKQKV 54 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YG + EK+F + + A+ G T NL+ +E RLD +V+R F T ARQ V+H Sbjct: 55 KFIYGVL-EKQFHNAYLRAEARPGKTGENLLQIMECRLDNVVFRLGFAQTRRDARQLVSH 113 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176 H VNG+ VNI SY+ K GDVIEV++ S+ A + + +P +++ ++ Sbjct: 114 AHFTVNGKKVNIPSYQVKAGDVIEVRESSRSSAKFAKLTGPEAPVVALPAWLNRETGSLK 173 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P D+ Y V +L+VE YS+ Sbjct: 174 GVVAKLPER-SDIDYEVA--EHLIVELYSK 200 >gi|160415806|gb|ABX39210.1| small ribosomal protein 4 [Bucklandiella didyma] Length = 188 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSNA---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A +++ +++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 KINKLLIVEYYSR 186 >gi|86438892|emb|CAJ55422.1| small ribosomal protein 4 [Plagiochila fasciculata] Length = 179 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 5/183 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + SY + K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + Sbjct: 117 ISINNDMVDIPSYNCEPGDIIAIRNKEKSQSIVTKNMNSFQKLKIPSHLTFDSTQLQGSV 176 Query: 180 VRI 182 ++ Sbjct: 177 NQM 179 >gi|67035877|gb|AAY62865.1| small ribosomal protein subunit 4 [Aptychella proligera] Length = 191 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD +++R PTI ARQ VNH+H+LVN VNI SY Sbjct: 59 VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P Y++ + +I Sbjct: 119 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNYLTYSSLEKKGFVNQIVDR---ELIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|67035714|gb|AAY62788.1| small ribosomal protein subunit 4 [Leucophanes mayottense] Length = 197 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 6/200 (3%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G L G ++ ++ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKILRRLGT-LSGLSNKTPQLKASSISINQSISNKKISQYRIRLEEKQKLRFHYG-LTE 58 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 59 RQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRI 118 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 VNI SY CK D I +K + K +++ + + P ++ N +I L Sbjct: 119 VNIPSYHCKPQDFITIKDQQKYQTMIVKNTNFFPKYKTPNHLIFNSVEKKGLVNQI---L 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 DQESIGLKINELLVVEYYSR 195 >gi|293633997|gb|ADE60378.1| ribosomal protein subunit 4 [Notoligotrichum australe] Length = 187 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|12642262|gb|AAK00213.1| rps4 [Zygodon intermedius] Length = 190 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ + Sbjct: 1 RRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERPLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R+V+I Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRTVDIPG 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 YRCKPHDFITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LDRELI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|313199636|ref|YP_004021252.1| ribosomal protein S4 [Isoetes flaccida] gi|291575365|gb|ADE18078.1| ribosomal protein S4 [Isoetes flaccida] Length = 202 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 8/207 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGRLPGPTQKTH---KKKPDFINRSTSSKKASKYRVRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A ++G T + LE R D I+ PTI ARQ VNH+H Sbjct: 58 HYG-LTERQLLEYVRIARGAKGSTGQVSLQSLEMRSDNIILGLGMAPTIPGARQMVNHKH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN ++NI SYRCK D+I ++ + K A + + + P + + + + Sbjct: 117 ILVNSCTINIPSYRCKPKDIITMRNRPKSQAMITRNRDSSRKYKKPNHSTFHSSQNIGLV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ LVVE++SR Sbjct: 177 NQIIDR---EWIDSKIKELLVVEYHSR 200 >gi|7576663|gb|AAF63944.1| ribosomal protein system 4 [Bescherellia cryphaeoides] Length = 188 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIASY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|118577563|gb|ABL07147.1| small ribosomal protein 4 [Piper retrofractum] Length = 181 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+ Sbjct: 56 KGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDI 115 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I + + + V + A R ++P++++++ +I S + + L Sbjct: 116 ITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELL 172 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 173 VVEYYSR 179 >gi|12642242|gb|AAK00203.1| rps4 [Chamaebryum pottioides] Length = 193 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ S ++ +K S + ++L KQK++ +YG I+E++ + Sbjct: 4 RRVGALPGLTNKTSQLKSST---INQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLN 59 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE R D +++R TI ARQ VNHRH+LVN V+I S Sbjct: 60 YVRIARKAKGSTGQVLLQILEMRSDNVIFRLGMALTIPEARQLVNHRHILVNDCIVDIPS 119 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 120 YRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI---LDRESI 176 Query: 192 PVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 177 GLKINELLVVXYYSR 191 >gi|74273151|gb|ABA01275.1| ribosomal protein S4 [Passiflora microstipula] Length = 183 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P+ ++ R K S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKRPIVGSAF-------SRSGKKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K + K + + E+ +P++++++ +I S + Sbjct: 113 KPRDLITAKDEEKLKDVIQHSFLSFPEKKLPKHLTLHLLQYKGLVNQIIDSK---WVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|293634005|gb|ADE60382.1| ribosomal protein subunit 4 [Notoligotrichum tapes] Length = 187 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNFLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|37992635|gb|AAR06496.1| small ribosomal protein 4 [Papillaria penicillata] gi|37992637|gb|AAR06497.1| small ribosomal protein 4 [Papillaria penicillata] Length = 188 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|15145866|gb|AAK83551.1| rps4 [Tayloria tasmanica] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKTKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P ++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQAIINKNIEFHQKYKIPNHLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576611|gb|AAF63918.1| ribosomal protein system 4 [Sematophyllum demissum] Length = 190 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNFLEKKGLINQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|77862547|gb|ABB04546.1| small ribosomal protein 4 [Peltolepis quadrata] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 8/195 (4%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + KI RR+G+ K+ + Y ++ K S + ++L KQK++ +Y Sbjct: 1 RYRGPRVKIIRRLGDLPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHY 57 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L Sbjct: 58 G-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVR 181 +N V+I SY CK DVI +K + K + + + ++ P +++ + + + Sbjct: 117 INNNMVDIPSYNCKPKDVITIKDRQKSQSIITKNLTSFQKQKTPNHLTFDLLQVKGLVNQ 176 Query: 182 IPSSLKDVPYPVIMQ 196 I + + Sbjct: 177 IIDR---EWIYLKIN 188 >gi|307828377|gb|ADN94987.1| small ribosomal protein 4 [Fossombronia pusilla] gi|307828383|gb|ADN94990.1| small ribosomal protein 4 [Fossombronia pusilla] gi|307828385|gb|ADN94991.1| small ribosomal protein 4 [Fossombronia wattsii] gi|307828436|gb|ADN95015.1| small ribosomal protein 4 [Fossombronia sp. VF-2010] Length = 188 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 1 LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 57 RVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GDVI V+ + K + + ++ L ++ P +++++ + + + + Sbjct: 117 CKPGDVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|42556462|gb|AAS19826.1| small ribosomal protein 4 [Nardia assamica] Length = 191 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD V+R PTI ARQ VNHRH+ +N ++I Sbjct: 57 KYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHRHISINNDIIDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD I +K K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 SYNCEPGDKITIKNKQKSQSIITKNISLFQKLKIPSHLTFDLTQLQGSVNQMVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|7576527|gb|AAF63876.1| ribosomal protein system 4 [Pterobryon densum] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKILQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D + +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFVTIKNQQKSETIINKNIKFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|146261567|gb|ABQ15093.1| ribosomal protein S4 [Heuchera micrantha] Length = 184 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I K + K + + ++P+Y++++ +I + + + Sbjct: 116 RDIITAKDEQKSRTLIQNYLDSSPHEELPKYLTLHPLQYKGLVNQIIDNK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|42556492|gb|AAS19841.1| small ribosomal protein 4 [Ptychanthus striatus] Length = 188 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGSLPGLTSKISKTK------IDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++ TI +ARQ VNHRH+ +N VNI Sbjct: 54 KYVRIARKTKGSTGQLLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNIP 113 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I +K K K + + + L+++ +P +++ + + + Sbjct: 114 SYNCKPGDIITIKNKEKSQSIISKNINLSQKLQIPNHLTFDSTQLRGLVNQTIRR---EW 170 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 171 IDLKINELLVVEYYSR 186 >gi|7576587|gb|AAF63906.1| ribosomal protein system 4 [Helicodontium capillare] Length = 190 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D + +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFVTMKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|307828388|gb|ADN94992.1| small ribosomal protein 4 [Fossombronia truncata] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 2 LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 58 RVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GDVI V+ + K + + + L ++ P +++++ + + + Sbjct: 118 CKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WINL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|32401810|gb|AAP80893.1| small ribosomal protein 4 [Sassafras albidum] Length = 184 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRFHYG-LTERQLLXYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRVVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + A + + R D+ ++++ + +I + + Sbjct: 116 RDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQYKGLVNQIIDIK---WIGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 EFLVVEYYSR 182 >gi|12330484|gb|AAG52779.1| ribosomal protein 4 [Tetraplodon lamii] Length = 188 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I K + K A + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITTKDRQKSQAIISKNIXFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|58293897|gb|AAW69895.1| small ribosomal protein 4 [Schlotheimia torquata] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTSQLK---YNSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++D +P +++ N +I L+ Sbjct: 117 RCKPQDSITIKDRRKSQDIINKNIDFYQKDKIPNHLTYNSLEKKGLVNQI---LERELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|218157225|gb|ACK58429.1| ribosomal protein subunit 4 [Polytrichadelphus peruvianus] Length = 186 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 7/190 (3%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+P Y +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSGYINQQTLSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 57 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRCK Sbjct: 58 RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKP 117 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + + A ++ +++ +P +++ N +I L + + Sbjct: 118 QDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKIN 174 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 175 ELLVVEYYSR 184 >gi|32892124|gb|AAP89001.1| ribosomal protein S4 [Passiflora macrophylla] Length = 183 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + + +P++++++ I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEQLPKHLTLHRFQYKGLVNEIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|67035839|gb|AAY62846.1| small ribosomal protein subunit 4 [Schroeterella zygodonta] Length = 191 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|118577557|gb|ABL07144.1| small ribosomal protein 4 [Piper aequale] Length = 176 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 7 LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + + V Sbjct: 66 LDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQN 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 126 SMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 174 >gi|22854695|gb|AAN09767.1| small ribosomal protein 4 [Dicranum majus] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + K S + ++L +K++ +YG I+E++ + Sbjct: 2 LGTLPGLTNKTPQLKSGS---IIQSTSNKKVSQYRIRLEENRKLRFHYG-ITERQLLNYI 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 58 RIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I ++ + K A +++ +++ +P +++ + +I L + Sbjct: 118 CKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|225552320|ref|ZP_03773260.1| ribosomal protein S4 [Borrelia sp. SV1] gi|225371318|gb|EEH00748.1| ribosomal protein S4 [Borrelia sp. SV1] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 6/184 (3%) Query: 25 SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 + + + PG+HG+ RK+K + +G QL KQK+K YG +SE++ + FKEA + G T Sbjct: 8 KILKKKPHPPGMHGKARKAKITEYGKQLIEKQKIKFTYG-VSERQLTNTFKEAKKHHGVT 66 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 NL+S LE R+D +VYRA F + ARQ V+H +++NGR V I S + D I++K Sbjct: 67 GDNLLSILERRIDNVVYRAGFAISRAHARQIVSHGIIILNGRRVTIPSIVLRTNDQIQIK 126 Query: 145 QKSKQLASVLEASQ--LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 +K + + + R++P +I VN D++ PS + P + +VVE Sbjct: 127 EKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLNIKVKHAPSRDE---IPTLANEQMVVE 183 Query: 203 FYSR 206 +YS+ Sbjct: 184 YYSK 187 >gi|32401818|gb|AAP80897.1| small ribosomal protein 4 [Pterocarya stenoptera] Length = 174 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 5/175 (2%) Query: 33 GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92 G L Q R SK S + ++L KQK++ +YG ++E++ + A +++G T L+ L Sbjct: 2 GSDLRNQSRFSKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLL 60 Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I + + K A Sbjct: 61 EMRLDNILFRLGMTSTIPQARQLVNHRHILVNGRIVDIPSYRCKPQDIITARDEQKSRAL 120 Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + R ++P++++++ +I S + + LVVE+YSR Sbjct: 121 IQNYLDSSPREELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 172 >gi|42718066|gb|AAS38455.1| rps4 [Brachymitrion jamesonii] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSXS---INQSTSNKKTSQYRIRLXEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|46486572|gb|AAS98722.1| ribosomal protein subunit 4 [Cyrtopus setosus] Length = 199 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 12 LGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 67 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 68 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 127 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + ++ +P +++ + +I L + Sbjct: 128 CKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIGL 184 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 185 KINELLVVEYYSR 197 >gi|7576637|gb|AAF63931.1| ribosomal protein system 4 [Leucomium strumosum] Length = 190 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKLKIPNHLTYNFLEKKGLINQI---LHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|74272274|gb|AAT01827.2| small ribosomal protein 4 [Hymenophyton flabellatum] Length = 193 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 R +G L G + +S +K S + ++L KQK++ +YG ++E++ Sbjct: 1 RXLGT-LPGLSNKMLELKSGYTNQSTANKK--ISQYRIRLEEKQKLRFHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD IV+R PTI ARQ VNHRH+ +N V+I S Sbjct: 57 YVRIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIPINDDMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK DVI + + K + L ++ +P +++ + + ++ Sbjct: 117 YNCKPEDVITTRNRRKSQLIITRNINLFQKQKIPNHLTFDSTQFRGSVNQMIDR---ECI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 NLKINELLVVEYYSR 188 >gi|58293899|gb|AAW69896.1| small ribosomal protein 4 [Desmotheca apiculata] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K K + + ++ +P ++ N +I L Sbjct: 117 RCKPLDFITIKDGRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|3098196|gb|AAC15546.1| small ribosomal protein 4 [Philonotis fontana] gi|29422373|gb|AAO84582.1| small ribosomal protein 4 [Philonotis fontana] Length = 187 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A + + ++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|58293869|gb|AAW69882.1| small ribosomal protein 4 [Orthotrichum macrocephalum] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNH+H++VN R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLENKGFVNQILDRK---LIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|12330456|gb|AAG52765.1| ribosomal protein 4 [Andreaea rothii] gi|20531051|gb|AAM27349.1| ribosomal protein 4 [Andreaea rothii] Length = 188 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ S+ + ++L KQK++ +YG I+E++ Sbjct: 1 LGALPGLTNKTPQLKSGYMDPFISNKKMSQ---YRIRLEEKQKLRFHYG-ITERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + +++ +P ++ N +I + Sbjct: 117 CKPQDFITIKDRQKSQAIITKNIDCSQKXKIPNHLIFNSLQKKGLINQIIDR---ESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|258611701|ref|ZP_05711611.1| ribosomal protein S4 [Listeria monocytogenes FSL R2-503] gi|258605525|gb|EEW18133.1| ribosomal protein S4 [Listeria monocytogenes FSL R2-503] Length = 170 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 5/168 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S +GLQ KQK++ YG ++E++F++ F +A + +G N + LE RLD Sbjct: 8 QLNVKKYSEYGLQQAEKQKLRHMYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 66 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IVYR T AARQ VNH H+ V+G+ V+I SY+ G VI V++KS + +++ E+ + Sbjct: 67 IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLE 126 Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ VPEY++ + + + + R+P + + +VEFYSR Sbjct: 127 VSSF-VPEYVTFDAEKLTGSLNRLPERSE---LAAEINEAFIVEFYSR 170 >gi|163804148|ref|ZP_02197919.1| 30S ribosomal protein S4 [Vibrio sp. AND4] gi|159172034|gb|EDP57005.1| 30S ribosomal protein S4 [Vibrio sp. AND4] Length = 143 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 5/147 (3%) Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR+ +K+A R +G+T NL+ LE RLD +VYR F T ARQ V+H+ Sbjct: 1 MYGVL-EKQFRNYYKDAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 59 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 +LVNG+ VN+ S++ DV+ +++K+KQ A + A ++AE R+ P +I V+ M TF Sbjct: 60 ILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVAEQREKPTWIEVDGGKMEGTF 119 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + L+VE YS+ Sbjct: 120 KRMPERSD---LSADINEQLIVELYSK 143 >gi|48927217|emb|CAE47544.1| small ribosomal protein 4 [Equisetum telmateia subsp. braunii] Length = 207 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I R NL G V ++ Q + K S +G++L AKQ+++ Sbjct: 1 MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQTSGSDQSNQKKVSQYGIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R VPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V+I S+ CK D+I + + + + + A+ +P+++++ Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GLVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|262192914|gb|ACY30474.1| small ribosomal subunit protein 4 [Bryum apiculatum] Length = 188 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ V+HRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFFKKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|296120999|ref|YP_003628777.1| ribosomal protein S4 [Planctomyces limnophilus DSM 3776] gi|296013339|gb|ADG66578.1| ribosomal protein S4 [Planctomyces limnophilus DSM 3776] Length = 202 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M + K +++RR+G ++ + R+ PG+ +RRK +G KQK+ Sbjct: 1 MGRYTGPKGRVNRRLGAIVFENAGAIRALERRNTPPGMAERRRKLSA--YGTAHFEKQKI 58 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YYG + E + R F+ A +G+T L+ E RLD IV RA F + ARQ + H Sbjct: 59 KYYYG-LREAQLRKYFEMARAKKGNTGEFLLLTCERRLDNIVRRAGFTKSRLQARQGIVH 117 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 RH +NG +V+I S K GDVI ++ + + + A ++++V+ Sbjct: 118 RHFQLNGHTVDIPSILVKPGDVITLRNRPNVKELYADLVESASLPSVDWLAVDRSGFEIR 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++ D+ PV + LVV SR Sbjct: 178 VMALPTAT-DISLPVEI--GLVVALMSR 202 >gi|37992631|gb|AAR06494.1| small ribosomal protein 4 [Papillaria nigrescens] Length = 188 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|7576589|gb|AAF63907.1| ribosomal protein system 4 [Echinodium umbrosum] Length = 186 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P T S ++ +K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLTSSS---INQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|262192918|gb|ACY30476.1| small ribosomal subunit protein 4 [Rosulabryum capillare] Length = 188 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 CKPEDSITIKDRQKSQAIINKNLNLYQKYKTPNHLTYNFLKKKGLVTQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|166836614|gb|ABY90539.1| ribosomal protein small subunit 4 [Pilularia minuta] Length = 200 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K+ ++ Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKIIRRLKSLPGLTGKASKQKKTRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD +V+ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS--QLAERDVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + ++P ++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSGSNEIPNHLSLSILEGNKPKGLVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198 >gi|12330470|gb|AAG52772.1| ribosomal protein 4 [Buxbaumia aphylla] Length = 189 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P Y + K S + ++L KQK++ +YG I+E++ Sbjct: 1 RLGALPGLTNKIPXLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T + E RLD I++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARGAKGSTGQISLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNNIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K K + +L+++ +P +++ N I L Sbjct: 117 RCKPQDFITIKNSQKSQTXITXNIELSQKYKIPNHLTFNSLEKKGLVNXI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576565|gb|AAF63895.1| ribosomal protein system 4 [Clasmatodon parvulus] Length = 190 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D + +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|146261563|gb|ABQ15091.1| ribosomal protein S4 [Haloragis aspera] Length = 182 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P G L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 56 AKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPQD 115 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I K + K A + L+ ++P+++++ +I + + + Sbjct: 116 IITAKDEQKSRAMIQNYLDLSPHEELPKHLTLQPFQYKGLVNQIIDNK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|32401822|gb|AAP80899.1| small ribosomal protein 4 [Hedera helix] Length = 184 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 GKVKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + + + ++P++++++ +I S + + Sbjct: 116 RDIITARDEENSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|307828405|gb|ADN95000.1| small ribosomal protein 4 [Fossombronia sp. VF-2010] gi|307828413|gb|ADN95004.1| small ribosomal protein 4 [Fossombronia cultriformis] Length = 187 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 3 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 60 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + + L ++ P +++++ + + + + + Sbjct: 120 DVITVRNRQKSQSIIARSMSLFQKAKTPNHLTLDSTQLRGSINQTIDRD---WINLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|12330534|gb|AAG52804.1| ribosomal protein 4 [Leptobryum stellatum] gi|42718114|gb|AAS38479.1| rps4 [Leptobryum stellatum] Length = 189 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRIHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I S Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSD 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFIIIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|108796748|ref|YP_636511.1| ribosomal protein S4 [Zygnema circumcarinatum] gi|90101671|sp|Q32RL5|RR4_ZYGCR RecName: Full=30S ribosomal protein S4, chloroplastic gi|61393732|gb|AAX45874.1| ribosomal protein S4 [Zygnema circumcarinatum] Length = 199 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K R Q +K K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIVRRLGPLPGLTTK----RRKLTEQNKLQDKKQKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD ++R TI AARQ VNH H Sbjct: 57 HYG-LTERQLLRYIRIARKAKGSTGQTLLQLLEMRLDNTIFRLGMAATIRAARQLVNHGH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +++N R V+I SYRCK D I ++ + + + + R +P ++++ A Sbjct: 116 IVLNERVVDIPSYRCKPNDKITIRDRDRSRILIEKNRTARSRLRIPGHLAM--KQNTALI 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + +VE+YSR Sbjct: 174 TQVVDPK---SIGLKVNELFIVEYYSR 197 >gi|307828417|gb|ADN95006.1| small ribosomal protein 4 [Fossombronia truncata] Length = 188 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 1 LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 57 RVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GDVI V+ + K + + + L ++ P +++++ + + + + Sbjct: 117 CKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|7576609|gb|AAF63917.1| ribosomal protein system 4 [Taxithelium planum] Length = 190 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RLGTLPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V+I SY Sbjct: 59 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAATIPEARQLVNHRHILVNDCIVDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K K K + + + +++ +P +++ N +I Sbjct: 119 RCKPQDFITIKNKRKSETIINKNIEFSQKYKIPNHLTYNSLEKKGLINQIVDR---ELIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|15145864|gb|AAK83550.1| rps4 [Tayloria magellanica] Length = 189 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P ++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQTIINKNIEFYQKYKIPNHLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|67036036|gb|AAY62944.1| small ribosomal protein subunit 4 [Bryhnia novae-angliae] Length = 189 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|3098172|gb|AAC15534.1| small ribosomal protein 4 [Rhodobryum giganteum] Length = 189 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + + L ++ P +++ N +I L Sbjct: 117 RCKPEDSIIIKDRQESQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576563|gb|AAF63894.1| ribosomal protein system 4 [Anacamptodon splachnoides] Length = 188 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIINKNIEFYQKFKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|297179943|gb|ADI23951.1| small ribosomal protein 4 [Sphagnum palenae] Length = 186 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 7/190 (3%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G ++S +K S + ++L KQK++ +YG I+E++ + A Sbjct: 1 SLPGLTNKTPQSKSGYINQSISNKK--VSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIA 57 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 R++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI SYRCK Sbjct: 58 RRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCKP 117 Query: 138 GDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + K A + + ++ P +++++ +I + + Sbjct: 118 RDFITIKDRPKSQAIITRSMDYSQSHKTPNHLNLDSSQKKGLVNQIIDR---ESIGLKIN 174 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 175 ELLVVEYYSR 184 >gi|293633995|gb|ADE60377.1| ribosomal protein subunit 4 [Notoligotrichum australe] Length = 187 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|63191853|gb|AAY34886.1| small ribosomal protein subunit 4 [Molendoa sendtneriana] Length = 191 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPNLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R + PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLRMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKDRQKSQIMITKNVDFSQNYKIPNHLTFNSLEKKGLVNQI---LNQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|18920785|gb|AAL82437.1| ribosomal protein system 4 [Pseudotaxiphyllum pohliicarpum] Length = 190 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 2 RLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 58 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 118 RCKPKDFITIKNQRKSEAIISKNMEFYQKSKIPNHLTYSSLEKKGLVTQI---LDRESIG 174 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 LKINELLVVEYYSR 188 >gi|37992409|gb|AAR06383.1| small ribosomal protein 4 [Adelothecium bogotense] Length = 194 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI R+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIHRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMATTIPGARQLVNHRHILVNNFIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEVIINKNIEFYQKSKIPNHLTYSSLEKKGVVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 CKSIGLKINELLVVEYYSR 192 >gi|67035602|gb|AAY62732.1| small ribosomal protein subunit 4 [Aongstroemia jamaicensis] Length = 186 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 59 KTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + +++ VP +++ N +I L + + Sbjct: 119 DFITIKNRQKSQAMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI---LDQESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|33411992|emb|CAD86726.1| ribosomal protein small subunit 4 [Brachydontium trichodes] Length = 185 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ VP ++++N +I L + + Sbjct: 118 DFITIKDRQKSQAMIIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---LNHESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|58293871|gb|AAW69883.1| small ribosomal protein 4 [Orthotrichum assimile] gi|116517476|gb|ABJ99092.1| ribosomal protein subunit 4 [Orthotrichum freyanum] gi|116517478|gb|ABJ99093.1| ribosomal protein subunit 4 [Orthotrichum freyanum] Length = 189 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSGSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H++VN R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|34763719|ref|ZP_00144640.1| SSU ribosomal protein S4P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886498|gb|EAA23752.1| SSU ribosomal protein S4P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 187 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 100/197 (50%), Gaps = 11/197 (5%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K R +G + + R P KP+ + QLR KQK K Y ++ EK+ Sbjct: 2 KKCRNLGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKFIY-NVMEKQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 FR I++EA R G T LI +LE RL+ +VYR F T ARQ V+H H+ VNGR VN Sbjct: 56 FRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGHIAVNGRRVN 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189 I S+R K GD++ V + SK + + A + A P ++ ++ ++ P+ Sbjct: 116 IASFRVKVGDIVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVLQNPTKDD-- 171 Query: 190 PYPVIMQPNLVVEFYSR 206 + +L+VEFYSR Sbjct: 172 -LDFDLNESLIVEFYSR 187 >gi|262192904|gb|ACY30469.1| small ribosomal subunit protein 4 [Bryum recurvulum] Length = 188 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ V+HRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|118577605|gb|ABL07168.1| small ribosomal protein 4 [Piper muricatum] gi|118577623|gb|ABL07177.1| small ribosomal protein 4 [Piper sylvaticum] Length = 180 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 3 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 61 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 62 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 121 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 122 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 178 >gi|7576645|gb|AAF63935.1| ribosomal protein system 4 [Leskeodon cubensis] Length = 189 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGVLPGLTNKILQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFTVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|63191763|gb|AAY34841.1| small ribosomal protein subunit 4 [Hypnodendron microstictum] Length = 191 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRXGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILVNDRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIKDRPKSQAIISKNIDFYQKYKIPNHLTYSSLEKKGFINQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|224533471|ref|ZP_03674062.1| ribosomal protein S4 [Borrelia burgdorferi CA-11.2a] gi|224513375|gb|EEF83735.1| ribosomal protein S4 [Borrelia burgdorferi CA-11.2a] Length = 178 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 6/180 (3%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88 + + PG+HG+ RK+K + +G QL KQK+K YG +SE++ + FKEA + G T NL Sbjct: 1 KKPHPPGMHGKARKAKITEYGKQLIEKQKIKFTYG-VSERQLTNTFKEAKKHHGVTGDNL 59 Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 +S LE R+D +VYRA F + ARQ V+H +++NGR V I S + D I++K+K Sbjct: 60 LSILERRIDNVVYRAGFAISRAHARQIVSHGIIILNGRRVTIPSIILRANDQIQIKEKDS 119 Query: 149 QLASVLEASQ--LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + R++P +I VN D++ PS + P + +VVE+YS+ Sbjct: 120 LKKLIRSNIEKTSSLRNLPTWIEVNADDLNIKVKHAPSRDE---IPTLANEQMVVEYYSK 176 >gi|77019207|emb|CAH60211.1| chloroplast 30S ribosomal protein S4 [Dryptodon torquatus] Length = 187 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + L+L KQK++ +YG I+E++ + + A Sbjct: 4 PGLTNKTPQLKSSS---INQSTSNKKISQYRLRLEEKQKLRFHYG-ITERQLLNYVRIAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 60 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 119 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ N +I L + + Sbjct: 120 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|262192910|gb|ACY30472.1| small ribosomal subunit protein 4 [Bryum yuennanense] Length = 188 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + ++ P +++ N +I L + Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNFYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|74273225|gb|ABA01312.1| ribosomal protein S4 [Passiflora tryphostemmatoides] Length = 183 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAKSAF-------SRPRRKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPTGPVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P++++++ I + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQKKLPKHLTLHRFPYKGLVHEIID---CKWVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|74273245|gb|ABA01322.1| ribosomal protein S4 [Paropsia guineensis] Length = 178 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 1 KRPRAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRLAGKAKGSTGQV 59 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 60 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQ 119 Query: 148 KQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 K + V + + + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 KSIVLVQNSLDSSPQEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 176 >gi|58293887|gb|AAW69890.1| small ribosomal protein 4 [Pentastichella pentasticha] gi|58293891|gb|AAW69892.1| small ribosomal protein 4 [Pleurorthotrichum chilense] Length = 189 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKYKIPNHLTYNSLEKNGFVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|297571412|ref|YP_003697186.1| ribosomal protein S4 [Arcanobacterium haemolyticum DSM 20595] gi|296931759|gb|ADH92567.1| ribosomal protein S4 [Arcanobacterium haemolyticum DSM 20595] Length = 206 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 1 MSKRESSKH-KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M+ + K + R +G L + + + R Y PG HG+ R K S + ++L+ KQ+++ Sbjct: 1 MATNRARKLVRQSRALGLALTPKAERYMQRRPYRPGEHGRGR-VKESDYSVRLKEKQRLR 59 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I E + R ++ EA R+ G + NL+ LE RLD +V RA F TI ARQ V HR Sbjct: 60 AQYG-IREAQLRKVWDEARRTEGMSGENLVELLEMRLDALVLRAGFARTIAQARQVVVHR 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNM 175 H+LV+G+ V+ S+R K G V++VK +S+ A L A+Q DV PEY+ V + + Sbjct: 119 HILVDGKLVDRPSFRVKPGQVVQVKPRSQASAQFLAAAQGQHADVLPAAPEYMKVELEKL 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR P + PV +VVEFYSR Sbjct: 179 RFELVRRPKRAE---VPVTCDVQMVVEFYSR 206 >gi|238058442|gb|ACR39372.1| small ribosomal protein 4 [Ptychostomum lonchocaulon] gi|262192912|gb|ACY30473.1| small ribosomal subunit protein 4 [Anomobryum auratum] gi|262192916|gb|ACY30475.1| small ribosomal subunit protein 4 [Bryum amblyodon] Length = 188 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992625|gb|AAR06491.1| small ribosomal protein 4 [Papillaria imponderosa] Length = 188 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|21914154|gb|AAM81299.1| ribosomal protein subunit 4 [Plagiobryum archangelicum] Length = 197 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 10 LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 65 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 66 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 125 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + L ++ P +++ N +I L + Sbjct: 126 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 182 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 183 KINELLVVEYYSR 195 >gi|7576515|gb|AAF63870.1| ribosomal protein system 4 [Cryphaea glomerata] Length = 190 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I Sbjct: 57 NYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I ++ + K A + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFITIQNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|118577625|gb|ABL07178.1| small ribosomal protein 4 [Piper thomsonii] Length = 184 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 GKAKGSTGRVLLQLLEMRLDNILFRLSMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 RDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|194738528|gb|ACF93821.1| small ribosomal protein 4 [Leptoscyphus gibbosus] gi|194738558|gb|ACF93836.1| small ribosomal protein 4 [Leptoscyphus gibbosus] Length = 177 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNTQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + +I + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175 >gi|118577609|gb|ABL07170.1| small ribosomal protein 4 [Piper nigrum] Length = 176 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 7 LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + + V Sbjct: 66 LDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQN 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A ++P++++++ +I S + + LVVE+YSR Sbjct: 126 SMDSASHEELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 174 >gi|12642216|gb|AAK00190.1| rps4 [Drummondia obtusifolia] Length = 189 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLXALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + +++ VP +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|63101033|gb|AAY33141.1| small ribosomal protein 4 [Scorpidium scorpioides] Length = 188 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|15145868|gb|AAK83552.1| rps4 [Tayloria lingulata] Length = 189 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P+++ N +I L Sbjct: 117 RCKPQDFITIKARQKSQVIINKNIEFHQKHKIPDHLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|12045167|ref|NP_072978.1| 30S ribosomal protein S4 [Mycoplasma genitalium G37] gi|255660353|ref|ZP_05405762.1| 30S ribosomal protein S4 [Mycoplasma genitalium G37] gi|1350998|sp|P47553|RS4_MYCGE RecName: Full=30S ribosomal protein S4 gi|1046011|gb|AAC71533.1| ribosomal protein S4 [Mycoplasma genitalium G37] gi|166078669|gb|ABY79287.1| ribosomal protein S4 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 205 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 3 KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59 K S K RR+G +L K S R PG HG R R S S + QL+ KQ+M+ Sbjct: 2 KYTGSIFKRSRRLGFSLLENNKEFSKGKKRKSIPGQHGNRFRSSTLSGYAQQLQEKQRMQ 61 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG I++K+FR +F+ + +G+ + NL LESRLD IVYR F PT +ARQ VNH Sbjct: 62 YMYG-ITDKQFRRLFRFVLKQKGNLTVNLFRVLESRLDNIVYRMGFAPTRKSARQMVNHG 120 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 HV++N ++V+ S GD + +K + + V + + ++ N T+ Sbjct: 121 HVILNDQTVDTPSIIINPGDKVRLKARITKSPLVKNFIE--NSVISSFVETNKKAFEGTY 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +R P + P + + VVE+Y R Sbjct: 179 IRFPERSE---LPAGINESYVVEWYKR 202 >gi|223587846|emb|CAQ03833.1| ribosmal protein S4 [Syringodea unifolia] Length = 186 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 10/194 (5%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + K RR+G K P G L Q R K S + ++L KQK++ +YG Sbjct: 1 RGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 LTERQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRI 182 GR V+I SYRCK D+I K K + A + + + ++P +++++ +I Sbjct: 116 GRIVDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQI 175 Query: 183 PSSLKDVPYPVIMQ 196 S + + Sbjct: 176 IDSK---WIGLKIN 186 >gi|218157211|gb|ACK58422.1| ribosomal protein subunit 4 [Atrichopsis compressa] gi|218157219|gb|ACK58426.1| ribosomal protein subunit 4 [Notoligotrichum minimum] gi|293634001|gb|ADE60380.1| ribosomal protein subunit 4 [Notoligotrichum crispulum] Length = 187 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + + +++ +P +++ N +I L + Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|7576559|gb|AAF63892.1| ribosomal protein system 4 [Bryhnia novae-angliae] Length = 188 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|63191681|gb|AAY34802.1| small ribosomal protein subunit 4 [Lepyrodontopsis trichophylla] Length = 198 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRIRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + + ++ +P +++ + +I Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 176 --LNRESIGLKINELLVVEYYSR 196 >gi|227501160|ref|ZP_03931209.1| ribosomal protein S4 [Anaerococcus tetradius ATCC 35098] gi|227216745|gb|EEI82146.1| ribosomal protein S4 [Anaerococcus tetradius ATCC 35098] Length = 197 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + +K R +G + + + R+ R+SK S +G+Q R KQK K Sbjct: 1 MAVSKDPVYKRARALGISPAYLGYTGESKRALP------NRRSKLSEYGMQQREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FR ++ A + +G T LI E RLD + +R+ T ARQ V H H Sbjct: 55 IYG-VSEKQFRGYYEAASKMKGQTGEELIILCERRLDNVAFRSGLARTRREARQIVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 + VNG V+I SY+ EGDVIEV++KS+ + + A V E+++ + +N+ Sbjct: 114 LTVNGVQVDIPSYKVSEGDVIEVREKSRSNSLFKAIKETNATFGVVEWLNSDIENLKVIV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ +D+ PV + ++VEFYS+ Sbjct: 174 DRFPTR-EDIDIPV--EERMIVEFYSK 197 >gi|146261551|gb|ABQ15085.1| ribosomal protein S4 [Cercidiphyllum japonicum] Length = 174 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 5/175 (2%) Query: 33 GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ L Sbjct: 2 GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLL 60 Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD I++R TI ARQ VNH+H+LVNG VNI SYRCK D+I + + K A Sbjct: 61 EMRLDNILFRLGMASTIPGARQLVNHKHILVNGGIVNIPSYRCKPRDIITARDEQKSRAL 120 Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + ++P++++++ +I S + + LVVE+YSR Sbjct: 121 IQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 172 >gi|37992571|gb|AAR06464.1| small ribosomal protein 4 [Lepidopilidium laevisetum] Length = 191 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G L G + +S +K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGV-LPGLSNKILELKSNSITQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI AARQ VNHRH++VN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTISAARQLVNHRHIVVNNYIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITIKNQPKSEAMISKNIEFYKKIKIPNHLTSNFLEKKGLINQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|75858224|gb|ABA28686.1| small ribosomal protein 4 [Allisonia cockaynii] Length = 191 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G L G + ++S +K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGA-LPGLTNKILKSKSGYTNQSVSNKK--ISQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L++ +V+I Sbjct: 57 KYVRIARKAKGSTGRVLLQSLEMRLDNIIFRFGMAPTIPGARQLVNHRHILIDDATVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK DVI +K + K + + +++ +P +++ + + ++ Sbjct: 117 SYGCKPRDVITIKNQRKPQSIITRDINSSQKPRIPNHLTFDSTQXRGSVNQMIDRD---W 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|7109195|gb|AAF36673.1| ribosomal protein 4 [Aulacopilum hodgkinsoniae] Length = 190 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKIPQLKSSS---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R TI ARQ VNH+H+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVNHKHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I +K + K +L+ + VP +++ N +I L Sbjct: 117 YRCKPQDLITIKNRQKSQGIILKNVDFSXXFKVPIHLTFNSLEKKGIVNQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|58293861|gb|AAW69878.1| small ribosomal protein 4 [Leiomitrium plicatum] Length = 189 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 RCKPLDFITIKDRQKSQNIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|67035959|gb|AAY62906.1| small ribosomal protein subunit 4 [Echinodium umbrosum] Length = 187 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLXSSS---INQSTSNXKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|328488194|gb|AEB19910.1| small ribosomal protein 4 [Schistochila tasmanica] Length = 191 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRSGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMTTTIPGARQLVNHRHILINNYIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNNKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|118577561|gb|ABL07146.1| small ribosomal protein 4 [Piper argyrophyllum] gi|118577581|gb|ABL07156.1| small ribosomal protein 4 [Piper graeffei] Length = 179 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 2 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 60 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 61 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 121 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 177 >gi|77019175|emb|CAH60193.1| chloroplast 30S ribosomal protein S4 [Grimmia incurva] Length = 195 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P + ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 12 PGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 67 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 68 KAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 127 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ N +I L + + Sbjct: 128 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 184 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 185 LLVVEYYSR 193 >gi|67035887|gb|AAY62870.1| small ribosomal protein subunit 4 [Fauriella tenuis] Length = 188 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSNS---INESTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ E RLD +++R T+ ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMASTVPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I + Sbjct: 117 CKPQDFISIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQIVDR---ESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992515|gb|AAR06436.1| small ribosomal protein 4 [Euptychium vitiense] Length = 194 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGTLQGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITEQ 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ E R D I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTISGARQLVNHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|307828444|gb|ADN95018.1| small ribosomal protein 4 [Fossombronia altilamellosa] Length = 185 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 58 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + ++ L ++ P +++++ + + + + + Sbjct: 118 DVITVRNRHKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|157689438|gb|ABV65275.1| ribosomal protein S4 [Carica papaya] Length = 177 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T L Sbjct: 1 RPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVL 59 Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D I VK + K Sbjct: 60 LQLLEMRLDNILFRMGMALTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDTITVKDEQK 119 Query: 149 QLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A + + ++P +++++ +I + + LVVE+YSR Sbjct: 120 SRALIQSFLDSSTHEELPNHLTLHTFQYEGLVNQIIDRK---WVGLKINELLVVEYYSR 175 >gi|42718100|gb|AAS38472.1| rps4 [Tetraplodon mnioides] Length = 189 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFY 204 + + LVVE+Y Sbjct: 174 LKINELLVVEYY 185 >gi|307828415|gb|ADN95005.1| small ribosomal protein 4 [Fossombronia cultriformis] Length = 188 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + Y L ++ S+ + ++L KQK++ +YG ++E++ Sbjct: 1 LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY Sbjct: 57 RVARKAKGSTGQTLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GDVI V+ + + + + + L ++ P +++++ + + + + Sbjct: 117 CKPGDVITVRNRQESQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|218157221|gb|ACK58427.1| ribosomal protein subunit 4 [Notoligotrichum tapes] Length = 186 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTLQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 59 RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + A + + +++ +P +++ N +I L + + Sbjct: 119 DFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNFLEKKGLVNQI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|15145860|gb|AAK83548.1| rps4 [Tayloria octoblepharum] Length = 189 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLNSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRVARKAKGSTGEILLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + A + + + ++ +P ++ N +I L Sbjct: 117 RCKPQDFITIKDRQTSQAIINKNIEFHQKHKIPTHLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|15145828|gb|AAK83532.1| rps4 [Aplodon wormskioldii] Length = 189 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEXKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R V+I SY Sbjct: 57 VRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQTIISKNIEFYQKYKIPNHLTFNFLQKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFY 204 + + LVVE+Y Sbjct: 174 LKINELLVVEYY 185 >gi|293633985|gb|ADE60372.1| ribosomal protein subunit 4 [Itatiella ulei] gi|293633987|gb|ADE60373.1| ribosomal protein subunit 4 [Itatiella ulei] gi|293634019|gb|ADE60389.1| ribosomal protein subunit 4 [Oligotrichum riedelianum] Length = 186 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTLQLKSGYINQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 59 RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + A + +++ +P +++ N +I L + + Sbjct: 119 DFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|66352020|gb|AAY44743.1| ribosomal protein system 4 [Splachnum pensylvanicum] Length = 190 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G L G + +S K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGA-LPGLTNKTLQLKSSPINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I S Sbjct: 57 YVRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + ++ +P ++ N +I Sbjct: 117 YRCKPQDFITIKDRQKSQVIISKNIDFYQKYKLPNHLVYNSLKKEGLVTQILDRQ---SI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|293376356|ref|ZP_06622593.1| ribosomal protein S4 [Turicibacter sanguinis PC909] gi|292645045|gb|EFF63118.1| ribosomal protein S4 [Turicibacter sanguinis PC909] Length = 169 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 5/163 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S +GLQL+ KQK++ YG ++E++FR + +A + G N + LESRLD +VYR Sbjct: 12 KISEYGLQLQEKQKLRHAYG-MTERQFRRTYDKAGKLAGKHGENFLYMLESRLDNLVYRL 70 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 T ARQ VNH H+ V+G+ V+I SY K G I +++KS LA V + + A Sbjct: 71 GLAATRRQARQLVNHGHITVDGKRVDIPSYSVKPGQTISLREKSANLAVVKASLE-ATIH 129 Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P++++ + M T+VR+P + + NL+VEFYSR Sbjct: 130 RPDFVTFDEATMTGTYVRLPERSE---VFADIHENLIVEFYSR 169 >gi|7576623|gb|AAF63924.1| ribosomal protein system 4 [Homalotheciella subcapillata] Length = 190 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+L+N V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILINDCIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D + +K + K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|3098160|gb|AAC15528.1| small ribosomal protein 4 [Imbribryum alpinum] Length = 188 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGVLPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ V+HRH+LVN R VNI SYR Sbjct: 57 RSARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|157689572|gb|ABV65342.1| ribosomal protein S4 [Terminalia catappa] Length = 181 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P G L Q R K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+ Sbjct: 56 KGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRMVDIPSYRCKPRDI 115 Query: 141 IEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I + K A + + +VP++++++ +I S + + L Sbjct: 116 ITARDDQKSRAMIQNYLDSYSHEEVPKHLTLHPFQSKGVVNQIIDSK---WVGLKINELL 172 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 173 VVEYYSR 179 >gi|33413251|emb|CAD86760.1| ribosomal protein small subunit 4 [Octoblepharum albidum] Length = 195 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G K+ +S + K S + ++L KQK++ +YG ++E++ Sbjct: 3 KIRRLGILPGLTNKTISQLKSSS--NNQSISNKKVSQYRIRLEEKQKLRFHYG-LTEQQL 59 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE RLD +++R PTI AARQ VNHR++LVN VNI Sbjct: 60 LNYMRVARKTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPAARQLVNHRYILVNNCIVNI 119 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK DVI +K + +++ + ++ +P ++S N +I L Sbjct: 120 PSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKYKIPNHLSFNALEKKGLVKQI---LDQE 176 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 FVGLKINELLVVEYYSR 193 >gi|37548865|gb|AAO32701.1| ribosomal protein 4 [Pogonatum nipponicum] Length = 186 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 ALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLXEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRCK Sbjct: 57 ARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + + A + + +++ +P +++ N +I L + + Sbjct: 117 PQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|37548841|gb|AAO32689.1| ribosomal protein 4 [Dendroligotrichum squamosum] gi|37548843|gb|AAO32690.1| ribosomal protein 4 [Hebantia rigida] gi|293634113|gb|ADE60436.1| ribosomal protein subunit 4 [Polytrichastrum torquatum] Length = 186 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 ALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 57 ARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + + A + +++ +P +++ N +I L + + Sbjct: 117 PQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|37992677|gb|AAR06517.1| small ribosomal protein 4 [Squamidium brasiliense] Length = 189 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 RCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|293634075|gb|ADE60417.1| ribosomal protein subunit 4 [Polytrichastrum alpinum] gi|293634079|gb|ADE60419.1| ribosomal protein subunit 4 [Polytrichastrum alpinum] Length = 186 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 ALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 57 ARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + + A + ++ +P +++ N +I L + + Sbjct: 117 PQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|18920741|gb|AAL82415.1| ribosomal protein system 4 [Herzogiella seligeri] Length = 193 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 6 LGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 61 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 62 RIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 121 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 122 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGL 178 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 179 KINELLVVEYYSR 191 >gi|254553691|gb|ACT67304.1| ribosomal protein S4 [Joinvillea plicata] Length = 181 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P GL Q K S + ++L KQK++ +YG ++E++ A ++ Sbjct: 1 LTSKTP----RSESGLKNQLHPGKKSQYRIRLEEKQKLRFHYG-LTERQLLRYVHIAGKA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I S+RCK D+ Sbjct: 56 KRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSFRCKPRDI 115 Query: 141 IEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I K + + + A+ +P++++++ +I S + + L Sbjct: 116 ITTKDDQRSKRLIQNSIASSAQVKLPKHLTIDTLQYKGLVNQIIDSK---WIGLKINELL 172 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 173 VVEYYSR 179 >gi|194738548|gb|ACF93831.1| small ribosomal protein 4 [Leptoscyphus sp. 3 ND-2008] Length = 177 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 13/187 (6%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 +PKS RS K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LKPKSSYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKT 51 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY C+ GD+ Sbjct: 52 KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDI 111 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 + ++ + K + + + L ++ +P +++ + + + +I + + + L Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELL 168 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 169 VVEYYSR 175 >gi|22854689|gb|AAN09764.1| small ribosomal protein 4 [Chorisodontium setaceum] gi|22854691|gb|AAN09765.1| small ribosomal protein 4 [Dichodontium pellucidum] Length = 184 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ + +I L + + Sbjct: 117 DFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|63191797|gb|AAY34858.1| small ribosomal protein subunit 4 [Triquetrella californica] Length = 191 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I Sbjct: 57 NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNRIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 SYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|40204825|emb|CAF02174.1| ribosomal protein small subunit 4 [Andreaea rupestris] Length = 188 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P Y ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 LGALPGLTNKTPQLKSGY---MNQFISNKKMSQYRIRLEEKQKLRFHYG-ITERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD +++R TI ARQ VNHRH+L+N R VNI SYR Sbjct: 57 RIARRAKGSTGQILLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHILINDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + +++ +P ++ N +I + Sbjct: 117 CKPQDFITIKDRQKSQAIITKNIDCSQKYKIPNHLIFNSLQKKGLINQIIDR---ESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|293634023|gb|ADE60391.1| ribosomal protein subunit 4 [Oligotrichum tenuirostre] Length = 185 Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKILQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYRCK Sbjct: 58 RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + A + + +++ +P +++ N +I L + + Sbjct: 118 DFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|118577585|gb|ABL07158.1| small ribosomal protein 4 [Piper hongkongense] gi|118577603|gb|ABL07167.1| small ribosomal protein 4 [Piper montium] gi|118577627|gb|ABL07179.1| small ribosomal protein 4 [Piper tricolor] Length = 178 Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 1 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 60 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 119 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176 >gi|74273109|gb|ABA01254.1| ribosomal protein S4 [Passiflora pittieri] Length = 183 Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++L+ KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIARSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + R+ +P+++ ++ I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPREKLPKHLILHRFQYKGLVNEIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|42556484|gb|AAS19837.1| small ribosomal protein 4 [Pleurozia conchifolia] Length = 191 Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+ SY L K S + ++L KQK++ +YG ++E++ Sbjct: 2 RRLGTLPGLTNKTLKLKSSY---LDRSMSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A + +G T L+ LE RLD ++R V TI ARQ VNHRHVL+N V+I S Sbjct: 58 YVRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVSTIPGARQLVNHRHVLINDNIVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y C+ GDVI +K K + + + +R +P ++ ++ + Sbjct: 118 YNCEPGDVIAIKNPEKNKSIITKNMNSFQRPKIPNHLVLDSTQFRGLVNKTIDR---EWI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVEFYSR Sbjct: 175 DLKINELLVVEFYSR 189 >gi|42718092|gb|AAS38468.1| rps4 [Tayloria stenophysata] Length = 189 Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLNSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRVARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + A + + + ++ +P ++ N +I L Sbjct: 117 RCKPQDFITIKDRQTSQAIINKNIEFHQKYKIPTHLVYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37992505|gb|AAR06431.1| small ribosomal protein 4 [Duthiella flaccida] Length = 188 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T + E RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|15145854|gb|AAK83545.1| rps4 [Tayloria pseudoalpicola] Length = 189 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD IV+R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIAKKAKGSTGEVLLQLLEMRLDNIVFRLGMXPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|328488174|gb|AEB19900.1| small ribosomal protein 4 [Schistochila chlorophylla] gi|328488192|gb|AEB19909.1| small ribosomal protein 4 [Schistochila kirkiana] Length = 191 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+L+N V+I Sbjct: 57 KYVRIARKAKGSTGQLLLQLLEMRLDNTIFRLGMTTTIPGARQLVNHRHILINNDIVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I +K K K + + L ++ +P +++ + + + + Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 INLKINELLVVEYYSR 189 >gi|307828434|gb|ADN95014.1| small ribosomal protein 4 [Fossombronia sp. VF-2010] Length = 186 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 2 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 59 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + ++ L ++ P +++++ + + + + + Sbjct: 119 DVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|11228654|gb|AAG33112.1| small ribosomal protein 4 [Leucoloma rutenbergii] Length = 191 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RLGTLPGLTNKIPELKSNS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R VPTI ARQ VNHRH+LVN R VNI SY Sbjct: 59 VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIVPTIPGARQLVNHRHILVNNRIVNIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + L+ + +++ VP +++ N +I Sbjct: 119 RCKPKDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ESIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|118577613|gb|ABL07172.1| small ribosomal protein 4 [Piper ossanum] Length = 184 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 GKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 RDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|307828381|gb|ADN94989.1| small ribosomal protein 4 [Fossombronia truncata] Length = 187 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 3 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 60 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + + L ++ P +++++ + + + + + Sbjct: 120 DVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|7576777|gb|AAF63985.1| small ribosomal protein 4 [Psilopilum laevigatum] Length = 189 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGAWPXLTNKTPQLKSGY---INQAVSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VN +H+LVN R VNI SY Sbjct: 57 VRIAGRAKGSTGPILLQLLEMRLDNIIFRLGMAPTIPGARQLVNPKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7109203|gb|AAF36677.1| ribosomal protein 4 [Stegonia latifolia] Length = 190 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKXPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|222103450|gb|ACM44254.1| small ribosomal protein subunit 4 [Sphagnum subsecundum] Length = 181 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K+P + +Y ++ K S + ++L KQK++ +YG I+E++ + A R++ Sbjct: 1 TSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARRAK 56 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 G T L+ LE RLD +++R PTI ARQ VNHRH+LVN +VNI SYRCK D I Sbjct: 57 GSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCKPQDFI 116 Query: 142 EVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 +K + K A + + + P +++++ + +I + + LV Sbjct: 117 TIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLKINELLV 173 Query: 201 VEFYSR 206 VE+YSR Sbjct: 174 VEYYSR 179 >gi|118577607|gb|ABL07169.1| small ribosomal protein 4 [Piper mutabile] Length = 178 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 1 KRPRSESSLRTQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 60 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 119 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176 >gi|307828398|gb|ADN94997.1| small ribosomal protein 4 [Fossombronia truncata] gi|307828430|gb|ADN95012.1| small ribosomal protein 4 [Fossombronia truncata] Length = 187 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 3 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 60 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + + L ++ P +++++ + + + + Sbjct: 120 DVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WINLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|307828407|gb|ADN95001.1| small ribosomal protein 4 [Fossombronia pusilla] gi|307828440|gb|ADN95016.1| small ribosomal protein 4 [Fossombronia pusilla] Length = 185 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 58 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + ++ L ++ P +++++ + + + + + Sbjct: 118 DVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|16565385|gb|AAL26207.1|AF313607_1 small ribosomal protein 4 [Lygodium lanceolatum] Length = 196 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 11/199 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K+ ++ G RK S F ++L AKQ+++ YG +E + Sbjct: 2 RRLKDLPGLTSKTSNPKKTRIDGDPSASRK--TSQFCIRLEAKQRLRFNYGS-TECQLLR 58 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++ G T + LE RLD IV+R PTI AARQ VNHRH+ VN R V+I S Sbjct: 59 YIRIARKAEGSTGQVSLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIPVNNRIVDIPS 118 Query: 133 YRCKEGDVIEVKQKSKQLASVLEA--SQLAERDVPEYISV---NHDNMVATFVRIPSSLK 187 YRCK D+I K ++ ++P+++++ D + I + Sbjct: 119 YRCKPKDIIASKGLLTPSGTLKSIGTESFKRNEIPDHLTLFAAEADQTKGSVNGIVNR-- 176 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 -ESIHLNINELLVVEYYSR 194 >gi|7576643|gb|AAF63934.1| ribosomal protein system 4 [Hookeria acutifolia] Length = 189 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGVLPGLTNNIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+ VN VNI S Sbjct: 57 YVRIARRAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGVNNCIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K A + + + ++ P +++ + RI L Sbjct: 117 YRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|297522434|gb|ADI44666.1| small ribosomal protein 4 [Micromitrium tenerum] Length = 184 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +S +K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 PGLTNKTPQLKSGSINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 AKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K + V++ +++ VP +++ N +I L + + Sbjct: 118 FITIKDRQKSQSMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIGLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|118577641|gb|ABL07186.1| small ribosomal protein 4 [Macropiper melanostachyum] Length = 179 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 2 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQI 60 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 61 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 121 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 177 >gi|157689552|gb|ABV65332.1| ribosomal protein S4 [Ruptiliocarpon caracolito] Length = 180 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 3 KRPRAGNDLRSQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 61 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 62 LLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQ 121 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 K A + + ++P++++++ +I S + + LVVE+YSR Sbjct: 122 KSRALIQNYLDSSSHEELPKHLTLHTFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 178 >gi|118577599|gb|ABL07165.1| small ribosomal protein 4 [Piper methysticum] Length = 179 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 2 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQI 60 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 61 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 121 RSKVLVQNSMDFASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 177 >gi|67035961|gb|AAY62907.1| small ribosomal protein subunit 4 [Thamnobryum ellipticum] Length = 188 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ E R D +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|115380404|ref|ZP_01467397.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] gi|310817857|ref|YP_003950215.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] gi|115362588|gb|EAU61830.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] gi|309390929|gb|ADO68388.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1] Length = 207 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 10/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 M++ + + RR+ L K P R Y PG HG +K+K + +GL++ K Sbjct: 1 MARYTGPRGRRARRLFVALTHLSTKDPDKDPSLRRPYPPGQHGPTQKTKMTDYGLRMMEK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K Y ++ EK+ R A RS + + LI+ +ESR D +V RA + +I ARQF Sbjct: 61 QKLKLSY-ELLEKQCRRYVDRAKRSGSNATQVLITLIESRFDAMVLRAGYATSIRQARQF 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDN 174 V H + V+G+ N+ K G +E++++ +Q VL+ + A R VP ++++ Sbjct: 120 VRHGYFTVDGKKANLPGMEFKPGTTVELRERFRQHPLVLQVREKTAHRGVPSHVALLEG- 178 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 R+ + +D+ PV + ++EFY Sbjct: 179 --GKGFRVLTRPEDIDPPVALDLAKIIEFY 206 >gi|12330498|gb|AAG52786.1| ribosomal protein 4 [Pentastichella pentasticha] Length = 189 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYXKYXIPNHLTYNSLEKNGFVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576583|gb|AAF63904.1| ribosomal protein system 4 [Schwetschkeopsis fabronia] Length = 188 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGILPGLTNKTPQLNSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576535|gb|AAF63880.1| ribosomal protein system 4 [Garovaglia elegans] Length = 190 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T + E RLD I++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 NYVRIARKTKGSTGEVSLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 SYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|7576531|gb|AAF63878.1| ribosomal protein system 4 [Ptychomnion aciculare] Length = 190 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 NYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDSIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K + + + ++ +P +++ + +I L Sbjct: 117 SYRCKPQDFIIIKDEKNYEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNKI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|63191787|gb|AAY34853.1| small ribosomal protein subunit 4 [Lyellia crispa] Length = 188 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+ Y + K S + ++L KQK++ +YG I+E++ Sbjct: 1 LGALPGLTNKTSQLKSGYS---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A ++G T L+ LE RLD I+++ PTI ARQ VNH+H+LVN R VNI SYR Sbjct: 57 RIARGAKGSTGQILLQLLEMRLDNIIFQLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAIIAKNIDFYQKYKIPNHLTFNSLEQKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|121761867|gb|ABM65019.1| ribosomal protein S4 [Plagiomnium cf. tezukae Harris 859] Length = 186 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGPTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE+RLD I++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGEVLLQLLETRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + ++ +P++++ N N +I + + Sbjct: 119 DFITIKDRQKSQTMISKNIDFYQKSKIPDHLTYNSLNKKGLVNQILDRD---SIDLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|7576657|gb|AAF63941.1| ribosomal protein system 4 [Brachythecium plumosum] Length = 188 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|254935389|gb|ACT88082.1| ribosomal protein S4 [Fatsia japonica] gi|254935391|gb|ACT88083.1| ribosomal protein S4 [Raukaua anomalus] gi|254935393|gb|ACT88084.1| ribosomal protein S4 [Schefflera digitata] gi|254935421|gb|ACT88098.1| ribosomal protein S4 [Pseudopanax colensoi var. ternatus] gi|254935423|gb|ACT88099.1| ribosomal protein S4 [Pseudopanax colensoi var. ternatus] gi|254935425|gb|ACT88100.1| ribosomal protein S4 [Pseudopanax colensoi var. colensoi] gi|254935429|gb|ACT88102.1| ribosomal protein S4 [Pseudopanax laetus] gi|254935431|gb|ACT88103.1| ribosomal protein S4 [Pseudopanax macintyrei] gi|254935435|gb|ACT88105.1| ribosomal protein S4 [Pseudopanax arboreus] gi|254935437|gb|ACT88106.1| ribosomal protein S4 [Meryta sinclairii] gi|254935439|gb|ACT88107.1| ribosomal protein S4 [Meryta denhamii] gi|254935445|gb|ACT88110.1| ribosomal protein S4 [Pseudopanax colensoi var. fiordensis] gi|254935447|gb|ACT88111.1| ribosomal protein S4 [Meryta latifolia] gi|254935453|gb|ACT88114.1| ribosomal protein S4 [Pseudopanax kermadecensis] Length = 181 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + ++P++++++ +I S + + LVVE+YSR Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179 >gi|293634069|gb|ADE60414.1| ribosomal protein subunit 4 [Polytrichadelphus longisetus] Length = 184 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P Y +K S + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 GLTNKTPQLKSGYINQQTLSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRCK D Sbjct: 58 AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKPQD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + A ++ +++ +P +++ N +I L + + Sbjct: 118 FITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|48927195|emb|CAE47533.1| small ribosomal protein 4 [Equisetum diffusum] Length = 207 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I R NL G V ++ + Q + K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQASGNDQSNQKKVSQYCIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R FVPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V+I S+ CK D+I + + + + + A+ +P+++++ Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEQKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|151370788|gb|ABS11012.1| ribosomal protein subunit 4 [Rhizogonium novae-hollandiae] Length = 194 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGILPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 DIPSYRCKPQDFITIKDQQKYQTIISKNINFYQKYKIPNHLIYNSLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIDLKINELLVVEYYSR 192 >gi|7576659|gb|AAF63942.1| ribosomal protein system 4 [Loeskeobryum brevirostre] Length = 186 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ +K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---VNQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ P +++ N +I L + Sbjct: 117 KPQDFITIKNQQKSETIISKNIEFYQKSKXPNHLTYNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|307828403|gb|ADN94999.1| small ribosomal protein 4 [Fossombronia densa] Length = 185 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTNRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 58 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + + L ++ P +++++ + + + + + Sbjct: 118 DVITVRNRHKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|32401773|gb|AAP80875.1| small ribosomal protein 4 [Picea rubens] Length = 191 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 9/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ K P N + + K S + ++ KQK++ +YG ++E++ Sbjct: 1 LIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRFHYG-LTERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE R D I+++ PTI ARQ VNH H+ VN V+I Sbjct: 56 LKYVRIARRAKGSTGQVLLQLLEMRSDNIIFQLGMAPTIPGARQLVNHGHIRVNDHMVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK DVI ++ + + + + L +RD +P +++ + +I S Sbjct: 116 PSYPCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFINQIIDSK--- 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 WISLKINELLVVEYYSR 189 >gi|22854719|gb|AAN09779.1| small ribosomal protein 4 [Leucobryum albidum] Length = 186 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + V + + +++ VP +++ N +I L + + Sbjct: 119 DFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|63191785|gb|AAY34852.1| small ribosomal protein subunit 4 [Bartramiopsis lescurii] Length = 185 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S +K S + ++L KQK++ +YG I+E++ + A Sbjct: 1 LPGLTNKTTQLKSGYSNQSVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 ++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 58 GAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + +++ +P ++++N +I L + + Sbjct: 118 DFITIKDQQKSQAIIAKNMNFSQKYKIPNHLTLNSLEKKGLVNQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|227345119|gb|ACP28112.1| small ribosomal protein 4 [Chiloscyphus helmsianus] Length = 183 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+ +Y + K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKTLKPKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R TI ARQ VNHRH+ +N V+I SY C+ GD Sbjct: 57 AKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSYNCEPGD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I ++ K K + + + L ++ +P +++ + + + ++ + + + Sbjct: 117 IITIRDKHKSQSMITKNINLFQKLKIPSHLTFDSIKLQGSVNQMINR---EWINLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|37548833|gb|AAO32685.1| ribosomal protein 4 [Atrichum oerstedianum] Length = 187 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S + ++L KQK++ +YG I+E+ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERXLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + ++ +P +++ N +I L + Sbjct: 117 KPQDFITIKNRQEXQAIITXNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLE 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|18920765|gb|AAL82427.1| ribosomal protein system 4 [Plagiothecium conostegium] Length = 193 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 6 FGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 61 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 62 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 121 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + ++ +P +++ + +I L + Sbjct: 122 CKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 178 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 179 KINELLVVEYYSR 191 >gi|58293865|gb|AAW69880.1| small ribosomal protein 4 [Macrocoma tenuis] Length = 189 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNQRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P ++ N +I Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLVYNSLEKKGLVNQIVDR---ELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|3098162|gb|AAC15529.1| small ribosomal protein 4 [Bryum caespiticium] Length = 189 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPRLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + L ++ P +++ N +I L Sbjct: 117 RCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|307828422|gb|ADN95008.1| small ribosomal protein 4 [Fossombronia alata] Length = 187 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 3 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 60 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + + L ++ P +++++ + + + + + Sbjct: 120 DVITVRNRHKSQSIIAKNMSLFQKPRTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|225571581|ref|ZP_03780577.1| hypothetical protein CLOHYLEM_07679 [Clostridium hylemonae DSM 15053] gi|225159658|gb|EEG72277.1| hypothetical protein CLOHYLEM_07679 [Clostridium hylemonae DSM 15053] Length = 181 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 +R K S +GLQLR KQK K YG + EK FR+ + +A + G T NL+ LESRLD Sbjct: 17 KRSNRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYTKAKQMSGMTGENLMILLESRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +V+R T ARQ V+H+HV+VNG+ +NI SY K GDV+E+K+K K + Sbjct: 76 VVFRMGLARTRREARQIVDHKHVMVNGKQINIPSYIVKAGDVVEIKEKHKSSPRYKGILE 135 Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R VP+++ V+ +N+ T +P+ V + L+VE YS+ Sbjct: 136 VTGGRLVPDWLEVDTENLKGTVKELPARDA---IDVPVDEMLIVELYSK 181 >gi|157689478|gb|ABV65295.1| ribosomal protein S4 [Floerkea proserpinacoides] Length = 186 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 9/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P L Q K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GTLPGLTSKRP----KTVSDLRNQPHFGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V+I SYRC Sbjct: 56 IAGKAKGSTGLVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRHILVNNHIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I VK + K A + + + + P++++ + +I + Sbjct: 116 KPQDSITVKNEQKSRALIQNFNDSSVHEEFPKHLTRHTFQYEGLVNQIIDRN---WVGLK 172 Query: 195 MQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 173 INELLIVEYYSR 184 >gi|67035668|gb|AAY62765.1| small ribosomal protein subunit 4 [Campylopus filifolius] Length = 186 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN VNI SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + +++ VP +++ N +I L + + Sbjct: 119 DFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLNINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|51860509|gb|AAU11391.1| ribosomal protein small subunit 4 [Ephedra antisyphilitica] Length = 205 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62 + KI RR+ K P + +H R K S + + L+ KQK++ +Y Sbjct: 3 YRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 58 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+L Sbjct: 59 G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 117 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177 VN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 118 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 177 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 178 IVNKIIDTKD---LQLKIKEMLVIEYYSR 203 >gi|255116230|gb|ACU01167.1| small ribosomal protein subunit 4 [Rhytidiadelphus triquetrus] Length = 186 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 ARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|118577591|gb|ABL07161.1| small ribosomal protein 4 [Piper leucophyllum] Length = 183 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 KAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + + + V + A R ++P++++++ +I S + + Sbjct: 116 DIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|254935433|gb|ACT88104.1| ribosomal protein S4 [Pseudopanax arboreus] Length = 181 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEXKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + ++P++++++ +I S + + LVVE+YSR Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179 >gi|58293863|gb|AAW69879.1| small ribosomal protein 4 [Matteria gracillima] Length = 189 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|307828426|gb|ADN95010.1| small ribosomal protein 4 [Fossombronia truncata] Length = 185 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 58 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + + L ++ P +++++ + + + + + Sbjct: 118 DVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|194738510|gb|ACF93812.1| small ribosomal protein 4 [Leptoscyphus azoricus] gi|194738512|gb|ACF93813.1| small ribosomal protein 4 [Leptoscyphus azoricus] gi|194738514|gb|ACF93814.1| small ribosomal protein 4 [Leptoscyphus azoricus] gi|194738516|gb|ACF93815.1| small ribosomal protein 4 [Leptoscyphus azoricus] gi|194738538|gb|ACF93826.1| small ribosomal protein 4 [Leptoscyphus jackii] gi|194738540|gb|ACF93827.1| small ribosomal protein 4 [Leptoscyphus jackii] gi|194738542|gb|ACF93828.1| small ribosomal protein 4 [Leptoscyphus physocalyx] gi|194738546|gb|ACF93830.1| small ribosomal protein 4 [Leptoscyphus porphyrius] Length = 177 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + +I + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175 >gi|118577637|gb|ABL07184.1| small ribosomal protein 4 [Macropiper latifolium] gi|118577643|gb|ABL07187.1| small ribosomal protein 4 [Macropiper puberulum f. glabrum] Length = 178 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 1 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQI 59 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 60 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 119 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176 >gi|33413235|emb|CAD86753.1| ribosomal protein small subunit 4 [Hypodontium pomiforme] Length = 185 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 8/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 RKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKP 116 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + K A +++ +++ VP +++ N +I L + + Sbjct: 117 QDFITIKDRQKYQAMIIKNLDFSQKTKVPNHLTFNFLEKNGLVNQI---LDQESIGLKIN 173 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 174 ELLVVEYYSR 183 >gi|37992413|gb|AAR06385.1| small ribosomal protein 4 [Aerobryopsis capensis] Length = 188 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|67035827|gb|AAY62844.1| small ribosomal protein subunit 4 [Acroporium pungens] Length = 190 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P R + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKIP---RLKSSSSNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLKINELLVVEYYSR 188 >gi|162415090|gb|ABX89119.1| ribosomal protein S4 [Syntrichia gemmascens] Length = 189 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITINDSKKSQVMITKNVDSFQKSKIPNHLTFNSLEKKGLINQI---LNQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|11121333|emb|CAC14832.1| ribosomal protein subunit 4 [Splachnum ampullaceum] Length = 195 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G L G + +S K S + ++L KQK++ +YG ++E Sbjct: 1 RVRIIRRLGV-LPGLTNKTLQLKSSPINQ--STSNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R Sbjct: 57 RQLLNYVRIARHAKGSTGEVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNERV 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+ SYRCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 VDRPSYRCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDRQ 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+ SR Sbjct: 177 ---SIGLKINELLVVEYXSR 193 >gi|12330544|gb|AAG52809.1| ribosomal protein 4 [Paludella squarrosa] gi|42718112|gb|AAS38478.1| rps4 [Paludella squarrosa] Length = 188 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLINQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + +VVE+YSR Sbjct: 174 KINELIVVEYYSR 186 >gi|74273145|gb|ABA01272.1| ribosomal protein S4 [Passiflora truncata] Length = 183 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPGVRSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ ++ +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILSPKKYKGLVNQIIDSK---SVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|42718054|gb|AAS38449.1| rps4 [Splachnum sphaericum] Length = 189 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P ++ N +I Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|32401808|gb|AAP80892.1| small ribosomal protein 4 [Kadsura japonica] Length = 184 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RPGSDPRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRLVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D+I + + + A + + + ++P++++++ +I S + + Sbjct: 116 RDIITTRDEHRSRALIQNSIDSSPNEELPKHLTLHSLQYKGLVNQIIDSK---WVGLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|32401769|gb|AAP80873.1| small ribosomal protein 4 [Tsuga mertensiana] Length = 191 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 12/197 (6%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+ K P + + K S + ++ KQK++ YG ++E++ Sbjct: 4 IIRRLKTLPGLTSKRPKSRNDSI-------NRRKISQYRIRPEEKQKLRFNYG-LTERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I Sbjct: 56 LKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK DVI ++ + + A + + L +RD +P++++ N +I S Sbjct: 116 PSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK--- 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 WISLKINELLVVEYYSR 189 >gi|22854685|gb|AAN09762.1| small ribosomal protein 4 [Ceratodon purpureus] Length = 186 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 57 ARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K +++ + +++ VP +++ N +I L + + Sbjct: 117 PQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI---LDQESVGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|67035759|gb|AAY62810.1| small ribosomal protein subunit 4 [Ulota phyllantha] Length = 188 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGXLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNH+H++VN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNXRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I ++ + K + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIRNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|283549382|dbj|BAI66353.1| small ribosomal protein 4 [Metacalypogeia cordifolia] Length = 188 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A + +G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYVRIARKVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY + GD+I V+ K K + + + ++ + +++ + + + + Sbjct: 117 VDIPSYNREPGDIITVRNKQKSQSIISKNVNSFQKSKISSHLNFDSKELRGFVNQTINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWIDLKINELLVV 188 >gi|167759834|ref|ZP_02431961.1| hypothetical protein CLOSCI_02197 [Clostridium scindens ATCC 35704] gi|167662453|gb|EDS06583.1| hypothetical protein CLOSCI_02197 [Clostridium scindens ATCC 35704] Length = 181 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 70/169 (41%), Positives = 96/169 (56%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 +R K S +GLQLR KQK K YG + EK FR+ FK+A G T NL+ LESRLD Sbjct: 17 KRSNRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYFKKASHMSGMTGENLMVLLESRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +V+R T ARQ V+H+H+LVNG+ +NI SY K GDVIE+K+K K E + Sbjct: 76 VVFRLGLARTRREARQIVDHKHILVNGKQINIPSYLIKAGDVIEIKEKHKSSPRYKEIVE 135 Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R VP+++ + +N+ T +P V + L+VE YS+ Sbjct: 136 VTGGRLVPDWLEADLENLKGTVKELPKR---EAIDVPVDEMLIVELYSK 181 >gi|37992725|gb|AAR06541.1| small ribosomal protein 4 [Weymouthia mollis] Length = 188 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---IIQSXSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|22854711|gb|AAN09775.1| small ribosomal protein 4 [Holomitrium calycinum] Length = 185 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSGSINQ--STSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ + +I L + + Sbjct: 118 DFITIKDRQKSQAMIIKNIDFSQKSKIPNHLAFSFLEKKGLVNQI---LDQESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|241518581|ref|YP_002979209.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862994|gb|ACS60658.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 146 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 98/138 (71%), Positives = 113/138 (81%), Gaps = 1/138 (0%) Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 +FR IF EA+R RGDTS NLI+ LESRLD IVYRAKF PT FAARQF+NH HV+VNG V Sbjct: 10 QFRRIFNEANRLRGDTSENLIALLESRLDAIVYRAKFAPTPFAARQFINHGHVIVNGMRV 69 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 NI SYRCK GDVIEV+ KSKQLA VLE+ LAERDVP+YI+ +H+ M ATF R+P+ L D Sbjct: 70 NISSYRCKAGDVIEVRPKSKQLAVVLESVGLAERDVPDYIAADHNKMTATFSRVPA-LAD 128 Query: 189 VPYPVIMQPNLVVEFYSR 206 VP+ VIM+P LVVEFYSR Sbjct: 129 VPFAVIMEPQLVVEFYSR 146 >gi|7576613|gb|AAF63919.1| ribosomal protein system 4 [Trichosteleum papillosum] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G L K+P S + Q K S + ++L KQK++ YYG I+E++ + Sbjct: 1 RRLGTLLGLTNKTPQLKSSS---SNQQTSNKKISQYRIRLEEKQKLRFYYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNSMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + K + + + E+ +P +++ N +I L Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFYEKSKIPNHLTYNSLEKKGLINKI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|293633999|gb|ADE60379.1| ribosomal protein subunit 4 [Notoligotrichum bellii] Length = 185 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTLQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYRCK Sbjct: 58 RAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + A + + +++ +P +++ N +I L + + Sbjct: 118 DFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|77019203|emb|CAH60207.1| chloroplast 30S ribosomal protein S4 [Grimmia alpestris] Length = 184 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ N +I L + + Sbjct: 117 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLVNQI---LDHESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|77019181|emb|CAH60196.1| chloroplast 30S ribosomal protein S4 [Grimmia lisae] Length = 185 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 PGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R +NI SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIINIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + +++ +++ +P +++ N +I L + + Sbjct: 118 DFITIKDRQKSQSIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|222103420|gb|ACM44239.1| small ribosomal protein subunit 4 [Amblystegium serpens] Length = 202 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 16 GTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 71 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 72 IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 131 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 132 KPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 188 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 189 INELLVVEYYSR 200 >gi|78102643|gb|ABB21535.1| small ribosomal protein 4 [Plagiochila drepanophylla] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + Y + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLSSKTLKSKSGY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY+C+ GD+I + K K A V + ++ + +++ + + + ++ + Sbjct: 117 VDIPSYKCEPGDIITIGNKQKSRAIVTKNINSFQKLKISGHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 --EWINLKINELLVVE 189 >gi|297522436|gb|ADI44667.1| small ribosomal protein 4 [Micromitrium megalosporum] Length = 184 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +S K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 PGLTNKTSQLKSNSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 AKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K + V++ + +++ VP +++ N +I L + + Sbjct: 118 FITIKDRQKSQSMVIKNIEFSQKYKVPNHLTFNSLEKKGLINQI---LNHESIGLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|293634121|gb|ADE60440.1| ribosomal protein subunit 4 [Polytrichum ericoides] Length = 185 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 8/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 57 RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKP 116 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + + A + +++ +P +++ N +I L + + Sbjct: 117 QDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKIN 173 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 174 ELLVVEYYSR 183 >gi|293634107|gb|ADE60433.1| ribosomal protein subunit 4 [Polytrichastrum sphaerothecium] Length = 185 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 8/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VNI SYRCK Sbjct: 57 RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDCIVNIPSYRCKP 116 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + + + +++ +P +++ N +I L + + Sbjct: 117 QDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESISLKIN 173 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 174 ELLVVEYYSR 183 >gi|33413213|emb|CAD86741.1| ribosomal protein small subunit 4 [Ditrichum heteromallum] Length = 187 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S + K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GILPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I K + K A +++ + ++ VP +++ N +I L + Sbjct: 117 KPQDFITSKNRPKSQAMIIKNVEFYQKYKVPNHLTFNSLEKKGLVNQI---LDQESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|229825290|ref|ZP_04451359.1| hypothetical protein GCWU000182_00644 [Abiotrophia defectiva ATCC 49176] gi|229790662|gb|EEP26776.1| hypothetical protein GCWU000182_00644 [Abiotrophia defectiva ATCC 49176] Length = 198 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 16/210 (7%) Query: 1 MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K R +G G K T G R+ Y G QLR KQK Sbjct: 1 MARDMVPVLKRCRALGIEPMVMGLDKKSNRT-------AGNSRRKISEY-GAQLREKQKA 52 Query: 59 KKYYGDISEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 K YG + EK FR+ F A + + G T NL+ LE RLD +++R T ARQ V Sbjct: 53 KFIYGVL-EKPFRNNFARAQKLKYGTTGENLMILLELRLDNVIFRLGLARTRKEARQMVG 111 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMV 176 H+ VLVNG+ VNI SY GD IE+K+K K + + + + R VP ++ ++ +N+ Sbjct: 112 HKMVLVNGKQVNIPSYTVAVGDKIEIKEKKKSIQRIKDVLEATNGRLVPAWLEMDRENLT 171 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AT IP+ + V + +VE YS+ Sbjct: 172 ATVKEIPTRDQ---IDVPVDEVFIVELYSK 198 >gi|49182793|gb|AAT57858.1| small ribosomal protein [Riccia fluitans] Length = 187 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ + Y ++ K S + ++L KQ ++ +YG ++E++ + Sbjct: 1 GALPGLTNKTFKSKSGY---INQSTSNKKXSQYRIRLEEKQNLRFHYG-LTERQLLKYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNH+H+L+N +V+I SY C Sbjct: 57 IARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHQHILINNNTVDIPSYNC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I +K + K + + + ++ +P +++ + +I + Sbjct: 117 KPKDIITIKDRQKSQSIITKNLNFFQKQKIPNHLTFDLIQFKGLINQIVDR---ECIYLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|33413231|emb|CAD86751.1| ribosomal protein small subunit 4 [Didymodon asperifolius] Length = 190 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLSNKIPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 YRCKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|12330520|gb|AAG52797.1| ribosomal protein 4 [Scouleria aquatica] Length = 188 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGVLPGLTNKTPQLKSSS---TNQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYI 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + +++ VP +++ N +I L + Sbjct: 117 CKPLDFITIKNRQKSQAIISKNINFSQKYKVPTHLTFNSLQKKGLVNQI---LNRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|293634093|gb|ADE60426.1| ribosomal protein subunit 4 [Polytrichastrum norwegicum] gi|293634099|gb|ADE60429.1| ribosomal protein subunit 4 [Polytrichastrum papillatum] Length = 185 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 8/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 57 RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKP 116 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + + A + ++ +P +++ N +I L + + Sbjct: 117 QDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINLKIN 173 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 174 ELLVVEYYSR 183 >gi|184128031|gb|ACC67915.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 194 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K+ + ++ Q K S + ++L AKQ+++ +G ++E++ Sbjct: 1 RRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I S Sbjct: 58 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKD 188 YRCK D+I V+ ++ V + + +D +PE+++++ + RI + Sbjct: 118 YRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD-- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -SIGLDINELLVVEYYSR 192 >gi|58293901|gb|AAW69897.1| small ribosomal protein 4 [Groutiella chimborazensis] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P R ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTP---RLKSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576533|gb|AAF63879.1| ribosomal protein system 4 [Glyphothecium sciuroides] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE R D I++R PTI ARQ VNHRH+LVN VNI S Sbjct: 57 YVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|194738530|gb|ACF93822.1| small ribosomal protein 4 [Leptoscyphus hexagonus] Length = 177 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDLVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + +I + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175 >gi|92417451|gb|ABE76821.1| ribosomal protein subunit 4 [Atrichum undulatum] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLXALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SY Sbjct: 57 VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + + A +++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNRQEFQAITTRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LEINELLVVEYYSR 187 >gi|12330548|gb|AAG52811.1| ribosomal protein 4 [Brachelyma subulatum] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E R D +++R TI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMALTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ +I L Sbjct: 117 RCKPQDFITIKNQQKSEAIISKNIEFYKKYKIPNHLTYISLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|58293867|gb|AAW69881.1| small ribosomal protein 4 [Cardotiella quinquefaria] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLIYNSLEKKGLVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|194738496|gb|ACF93805.1| small ribosomal protein 4 [Leptoscyphus antarcticus] Length = 177 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 13/187 (6%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 +PKS RS K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LKPKSSYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKA 51 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY C+ GD+ Sbjct: 52 KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSYNCEPGDI 111 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 + ++ + K + + + L ++ +P +++ + + + ++ + + + L Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EWINLKINELL 168 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 169 VVEYYSR 175 >gi|108861124|gb|ABG21434.1| ribosomal protein small subunit 4 [Pilularia americana] gi|166836606|gb|ABY90535.1| ribosomal protein small subunit 4 [Pilularia americana] gi|166836608|gb|ABY90536.1| ribosomal protein small subunit 4 [Pilularia americana] gi|166836616|gb|ABY90540.1| ribosomal protein small subunit 4 [Pilularia novae-hollandiae] gi|166836618|gb|ABY90541.1| ribosomal protein small subunit 4 [Pilularia novae-zelandiae] Length = 200 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K+ ++ Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKIIRRLKSLPGLTGKASKQKKTRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD +V+ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P ++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198 >gi|125662696|gb|ABN50298.1| small ribosomal protein 4 [Larix gmelinii var. principis-rupprechtii] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K P Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I S Sbjct: 56 YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK D I ++ + + + + L +RD +P +++ N +I S Sbjct: 116 YPCKPQDEITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFINQIIDSK---WI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 SLKINELLVVEYYSR 187 >gi|12330476|gb|AAG52775.1| ribosomal protein 4 [Splachnobryum obtusum] Length = 188 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L G +N +S +K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGT-LPGLSNKTLNLKSSFTNQSSSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKTKGSTGQILLQLLEMRLDNVLFRLGMATTIPGARQLVNHRHILVNKRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + +++ +P ++ N +I L + Sbjct: 117 CKPQDFITIKDRQKSQIMINKTVDFSQKPKIPNHLIFNSLEKKGLVNQI---LDQESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|12330556|gb|AAG52815.1| ribosomal protein 4 [Pterobryella praenitens] Length = 189 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + + +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRISRKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + ++ +P +++ + +I L Sbjct: 117 RCKLHDFITIKDRQKSQTIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|227485499|ref|ZP_03915815.1| ribosomal protein S4 [Anaerococcus lactolyticus ATCC 51172] gi|227236498|gb|EEI86513.1| ribosomal protein S4 [Anaerococcus lactolyticus ATCC 51172] Length = 197 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + +K R +G + + + R+ +R+SK S +G+Q R KQK K Sbjct: 1 MAVSKDPVYKRARALGISPAYLGYAGSSNRALP------KRRSKLSEYGMQQREKQKAKF 54 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG +SEK+FR + +A R +G T LI E RLD + +R+ T ARQ V H H Sbjct: 55 IYG-VSEKQFRGYYDKASRMKGQTGEQLIILCERRLDNVAFRSGLARTRREARQIVTHGH 113 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179 +LVNG+ V+I SY +EGDVIEV++KSK ++ A V E+++ + +N+ Sbjct: 114 LLVNGKQVDIPSYLIEEGDVIEVREKSKSSTLFKTIKEVNAAFGVVEWLNSDIENLKVKV 173 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+ + + ++ ++VEFYS+ Sbjct: 174 EKFPTREE---IDIPVEERMIVEFYSK 197 >gi|92417445|gb|ABE76818.1| ribosomal protein subunit 4 [Conocephalum conicum] Length = 186 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + ++S +K S + ++L KQK++ ++G ++E++ + A Sbjct: 2 LPGLTNKTLKSKSGYINQSISNKK--VSQYRIRLEEKQKLRFHFG-LTERQLLKYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+N +V+I SY CK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNITVDIPSYNCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI +K + K + + + + ++ +P ++S + + +I + + Sbjct: 119 DVITIKDRQKSQSIITKNLKSFQKSKIPNHLSFDLIQIKGLVNQIIDR---EWILLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|42556494|gb|AAS19842.1| small ribosomal protein 4 [Radula complanata] gi|118626059|emb|CAL41750.1| small ribosomal protein 4 [Radula complanata] Length = 191 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + + K S + ++L KQK++ +YG ++EK+ Sbjct: 1 IRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRFHYG-LTEKQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +G T LI LE RLD I++ PTI ARQ VNH+H ++N +VNI Sbjct: 57 KYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I V+ + K + + + L ++ ++P +++ + + + + + Sbjct: 117 SYNCELGDIITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDYNS 173 Query: 191 YPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INFKINELLVVEYYSR 189 >gi|37548829|gb|AAO32683.1| ribosomal protein 4 [Buxbaumia piperi] Length = 187 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P Y + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 GXXPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRC Sbjct: 57 IARAAKGSTGQILLQSLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K K + + +L++R +P ++++N +I L + Sbjct: 117 KPQDFITIKNSQKSQTIITKNIELSQRYKIPNHLTLNSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|254516934|ref|ZP_05128992.1| ribosomal protein S4 [gamma proteobacterium NOR5-3] gi|219674439|gb|EED30807.1| ribosomal protein S4 [gamma proteobacterium NOR5-3] Length = 154 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 5/158 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QLR KQK+++ YG + EK+FR+ +KEA R +G T NL+ LESRLD +VYR F T Sbjct: 1 MQLREKQKVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRIGFGSTR 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYI 168 +RQ V H+ +LVNG+ VNI SY+ K GDV+ +++K+K+ V A L A+R PE+I Sbjct: 60 SESRQLVAHKAILVNGKVVNIASYKVKAGDVVSLREKAKKQLRVQSAMALAAQRGEPEWI 119 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +N + + A + P + NL+VE YS+ Sbjct: 120 DINVEKLEAVYKAAPDRQD---LSSDINENLIVELYSK 154 >gi|80974150|gb|ABB53768.1| small ribosomal subunit protein 4 [Garovaglia elegans] Length = 191 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K P ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI Sbjct: 57 NYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I VK + + + ++ +P +++ +I L Sbjct: 117 SYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|20531122|gb|AAM27381.1| ribosomal protein 4 [Rosulabryum billarderi] Length = 187 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P + ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGLTSKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A + +G T L+ LE RLD +++R TI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKVKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 KPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|37992601|gb|AAR06479.1| small ribosomal protein 4 [Meteorium illecebrum] Length = 187 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|255017199|ref|ZP_05289325.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL F2-515] Length = 152 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 5/157 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +Q KQK++ YG ++E++F++ F +A + +G N + LE RLD IVYR T Sbjct: 1 MQQAEKQKLRHMYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTR 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 AARQ VNH H+ V+G+ V+I SY+ G VI V +KS + +++ E+ +++ VPEY++ Sbjct: 60 RAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVCEKSAKNSAIAESLEVSSF-VPEYVT 118 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + R+P + + +VEFYSR Sbjct: 119 FDAEKLTGSLNRLPERSE---LAAEINEAFIVEFYSR 152 >gi|37992543|gb|AAR06450.1| small ribosomal protein 4 [Hildebrandtiella cuspidans] Length = 188 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY+ Sbjct: 57 RIARKTKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNCIVDIPSYQ 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|33411994|emb|CAD86769.1| ribosomal protein small subunit 4 [Bryoxiphium norvegicum subsp. japonicum] Length = 180 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P + ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K A +++ +++ VP +++ N +I L + + L Sbjct: 117 ITIKDRQKSQAMIIKNIDFSQKYKVPNHLTFNSLEKKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|37992429|gb|AAR06393.1| small ribosomal protein 4 [Barbellopsis trichophora] Length = 187 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|42794722|gb|AAS45756.1| Rps4 [Thibaudia macrocalyx] Length = 211 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 17/215 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K QK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKXXXXXXXXXXXXQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E+ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RXHYG-LTERXLLKYVRIAXKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171 RHVLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKPKHKRVPYHLTLN 175 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|289599889|gb|ADD12895.1| ribosomal protein S4 [Doliocarpus multiflorus] gi|289599891|gb|ADD12896.1| ribosomal protein S4 [Doliocarpus subandinus] Length = 182 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 56 AKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I VK + K A + ++P++++++ +I S + + Sbjct: 116 IITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|37992519|gb|AAR06438.1| small ribosomal protein 4 [Floribundaria floribunda] Length = 187 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T + E RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|3098232|gb|AAC15564.1| small ribosomal protein 4 [Thuidium tamariscinum] Length = 188 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+ ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTSQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNRRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|194738560|gb|ACF93837.1| small ribosomal protein 4 [Leptoscyphus porphyrius] Length = 177 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + +P +++ + + + +I + + + LVVE+YSR Sbjct: 130 LFPKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175 >gi|37992493|gb|AAR06425.1| small ribosomal protein 4 [Dimorphocladon borneense] Length = 194 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S + K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + I L Sbjct: 117 DIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKSKIPNHLNYSFLEKKGLVNEI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|99640372|emb|CAJ45118.1| putative ribosomal protein S4 gene [Pilularia globulifera] gi|108861126|gb|ABG21435.1| ribosomal protein small subunit 4 [Pilularia globulifera] gi|166836612|gb|ABY90538.1| ribosomal protein small subunit 4 [Pilularia globulifera] Length = 200 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K+ ++ Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKIIRRLKSLPGLTGKASKQKKTRVAAE--QSTSKKISQFCVRLEAKQRLRFNYG-VTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD +V+ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P ++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198 >gi|134274697|emb|CAL30290.1| small ribosomal protein 4 [Marchesinia brachiata] Length = 184 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGSLPGLTGKISKTK------IDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQL 53 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD ++ TI +ARQ VNHRH+ +N VNI Sbjct: 54 LKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNI 113 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK GD+I +K K K + + + L+++ P +++ + + + Sbjct: 114 PSYNCKPGDIITIKNKEKSQSIISKNINLSQKLQTPNHLTFDSTQLRGLVNQTIRR---E 170 Query: 190 PYPVIMQPNLVVEF 203 + LVVE+ Sbjct: 171 WIDFKINELLVVEY 184 >gi|12330524|gb|AAG52799.1| ribosomal protein 4 [Barbula unguiculata] Length = 189 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITINDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|293634117|gb|ADE60438.1| ribosomal protein subunit 4 [Polytrichum commune] Length = 184 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 57 RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + A + +++ +P +++ N +I L + + Sbjct: 117 DFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|37992699|gb|AAR06528.1| small ribosomal protein 4 [Tetraphidopsis pusilla] Length = 190 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 10/198 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGILPGLTNKILQVKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V Sbjct: 57 QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 NI SYRCK D I V+ K K A + +P +++ + +I L Sbjct: 117 NIPSYRCKPQDFIIVENKQKSEA---ATDFSKKYKIPNHLTYSFLEKKGLVNKI---LDR 170 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 171 ESIGLKINELLVVEYYSR 188 >gi|157689562|gb|ABV65337.1| ribosomal protein S4 [Strasburgeria robusta] Length = 185 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P G L Q R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----KAGSDLRNQSRSLKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 ARKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D+I + + K A + + ++ +++++ +I S + + Sbjct: 116 ARDIITARDEQKSRALIQNYLDSSFHEELTKHLTLYPSQYKGLVNQIIDSK---WVGLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|29422401|gb|AAO84596.1| small ribosomal protein 4 [Bartramia ithyphylla] Length = 189 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLEALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K A + + ++ ++P +++ N +I Sbjct: 117 DRIVDIPSYRCKPHDFITIKDRPKSQAIISKNIDFYQKYEIPNHLTYNSSENKGLVNQI- 175 Query: 184 SSLKDVPYPVIMQPNL 199 L + + L Sbjct: 176 --LDRELIGLKINELL 189 >gi|262192908|gb|ACY30471.1| small ribosomal subunit protein 4 [Rhodobryum ontariense] Length = 188 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGPTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYI 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 C+ D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 CRPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|194738544|gb|ACF93829.1| small ribosomal protein 4 [Leptoscyphus porphyrius] Length = 177 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + +I + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDQIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175 >gi|63101101|gb|AAY33175.1| small ribosomal protein 4 [Pseudotrismegistia perundulata] Length = 188 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ E R D I++R PTI ARQ VNHRH+L+N V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILINDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|118577567|gb|ABL07149.1| small ribosomal protein 4 [Piper darienense] Length = 178 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 1 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 60 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKTRDIITTRNEQ 119 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176 >gi|77019159|emb|CAH60185.1| chloroplast 30S ribosomal protein S4 [Dryptodon decipiens] Length = 184 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + +++ +++ +P +++ N +I L + + Sbjct: 117 DFITIKDRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|118577559|gb|ABL07145.1| small ribosomal protein 4 [Piper amalago] Length = 180 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 3 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 61 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 62 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 121 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 122 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 178 >gi|42556496|gb|AAS19843.1| small ribosomal protein 4 [Radula okamurana] Length = 191 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K+ + + K S + ++L KQK++ +YG ++EK+ Sbjct: 1 IRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRFHYG-LTEKQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +G T LI LE RLD I++ PTI ARQ VNH+H ++N +VNI Sbjct: 57 KYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+I ++ + K + + L ++ ++P +++ + + + + + Sbjct: 117 SYNCELGDIITIRNRQKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDCNS 173 Query: 191 YPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INFKINELLVVEYYSR 189 >gi|17025869|gb|AAL32099.1| ribosomal protein 4 [Mitthyridium sp. Orban 1995] Length = 190 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P + ++ K S + ++L KQK++ +YG ++E++ + Sbjct: 3 LGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYV 58 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SY+ Sbjct: 59 RIARKVKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNSIVNIPSYQ 118 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K +++ ++ + + P +++ N +I L + Sbjct: 119 CKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 KINELLVVEYYSR 188 >gi|118577597|gb|ABL07164.1| small ribosomal protein 4 [Piper marginatum] Length = 183 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K P + S L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I + + + V + A ++P++++++ +I S + + Sbjct: 116 DIITTRNEQRSKVLVQNSMDSAYPEELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|121761831|gb|ABM65001.1| ribosomal protein S4 [Plagiomnium affine] Length = 186 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 ALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 57 ARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + ++ +P +++ N N +I + + Sbjct: 117 PQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD---SIDLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|293612008|gb|ADE48448.1| ribosomal protein 4 [Lepidozamia peroffskyana] Length = 183 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +R+ RR S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSRNDPTNQSSSRR---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 57 AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + K A + + L+++D +P +++++ +I S + + Sbjct: 117 VITVRDQQKLRAMIEKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|157689404|gb|ABV65258.1| ribosomal protein S4 [Picramnia polyantha] Length = 168 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 NQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLD 59 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 I++R TI ARQ VNH+H+ VN R V+I SYRCK D+I + + K + + Sbjct: 60 NILFRLGMASTIPQARQLVNHKHIFVNSRIVDIPSYRCKPQDIITARDEQKSINLIQNYL 119 Query: 158 QLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P +++++ +I S + + LVVE+YSR Sbjct: 120 DSSPHEELPNHLTLHPIQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 166 >gi|15145870|gb|AAK83553.1| rps4 [Tayloria gunnii] Length = 189 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G L G +S +K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGA-LPGLTNKISQLKSSPINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P ++ N+ +I L Sbjct: 117 RCKPQDFITIKDQQKSQAIINKNIEFHQKYKIPTHLIYNYLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|20531073|gb|AAM27358.1| ribosomal protein 4 [Theriotia lorifolia] Length = 184 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S K S ++L KQK++ +YG I+E++ + Sbjct: 1 ALPGLTSKTPQLKSSSI-----NASNKKISQXRIRLEEKQKLRFHYG-ITERQLLKYVRI 54 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SY CK Sbjct: 55 ARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNERIVNIPSYHCK 114 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + +++ +++ +P +++ + ++ L + + Sbjct: 115 PQDFITIKDRQKSQSIIVKNMDFSQKYKIPNHLTFDSLEKKGLVNQV---LDRESIGLKI 171 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 172 NELLVVEYYSR 182 >gi|289599955|gb|ADD12928.1| ribosomal protein S4 [Tetracera oblongata] Length = 182 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 56 AKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I VK + K A + + ++P++++++ +I S + + Sbjct: 116 IIIVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|42718062|gb|AAS38453.1| rps4 [Splachnum vasculosum] Length = 189 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 RCKPQDFITIKDRQKSXVIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576543|gb|AAF63884.1| ribosomal protein system 4 [Trachyloma diversinerve] Length = 188 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P ++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI---LDRESID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|254935413|gb|ACT88094.1| ribosomal protein S4 [Pseudopanax linearis] gi|254935443|gb|ACT88109.1| ribosomal protein S4 [Pseudopanax linearis] Length = 181 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + D +P++++++ +I S + + LVVE+YSR Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179 >gi|32401795|gb|AAP80886.1| small ribosomal protein 4 [Nymphaea tetragona] Length = 181 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P L Q R K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LTSKKP----RSASDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 G T L+ LE RLD I++R TI ARQ VNH H+LVNGR V+I SYRCK D+ Sbjct: 56 NGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSYRCKPRDI 115 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I K K A + + ++P++++++ +I S + + L Sbjct: 116 ITTKDKQGSRALIQNHMDSSSNAELPKHLTLHSLQYKGVVNQIIDSK---WVGLKVNELL 172 Query: 200 VVEFYSR 206 +VE+YSR Sbjct: 173 IVEYYSR 179 >gi|77019187|emb|CAH60199.1| chloroplast 30S ribosomal protein S4 [Grimmia montana] Length = 184 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ N +I L + + Sbjct: 117 DFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|7576607|gb|AAF63916.1| ribosomal protein system 4 [Pylaisiadelpha tenuirostris] Length = 190 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE R D +++R TI ARQ VNHRH+LVN V+I SY Sbjct: 59 VRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I Sbjct: 119 RCKPQDFITIKNQRKSETMISKNIEFYQKSKIPNHLTYSSLEKKGLVNQIVDR---ELIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|170516247|gb|ACB15125.1| small ribosomal protein 4 [Encephalartos gratus] Length = 187 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +R+ R+ S + ++L KQK++ +YG ++E++ + A Sbjct: 4 LPGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAG 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 60 RAKGSTGQVLLQLLEMRSDNTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPR 119 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K A + + L+++D +P +++++ +I S + + Sbjct: 120 DVITVRDQQKSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|307828409|gb|ADN95002.1| small ribosomal protein 4 [Fossombronia cultriformis] Length = 187 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 3 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV +VNI SY CK G Sbjct: 60 KAKGSTGQTLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVGDDTVNIPSYSCKPG 119 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + + + + + L ++ P +++++ + + + + + Sbjct: 120 DVITVRNRQESQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|157689442|gb|ABV65277.1| ribosomal protein S4 [Celtis occidentalis] Length = 182 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 10/188 (5%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P G L Q R +K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LTSKKP----RAGSDLRNQLRPNKKSQYRIRLEEKQKLRFHYG-LTEEQLLKYVRIAGKA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+ VNGR V+I SYRCK D+ Sbjct: 56 KGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHIFVNGRMVDIPSYRCKPRDI 115 Query: 141 IEVKQKSKQLASVLEA--SQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I V+ + K+ S+++ A ++P++++++ + +I S + + Sbjct: 116 ITVRDEQKKSKSMVQNYLDSSAREELPKHLTLDPFQSKGSVNQIIDSK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|29027240|gb|AAN47182.1| small ribosomal protein 4 [Hymenodontopsis bifaria] Length = 194 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+ K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLXALPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K A + + ++ +P +++ + +I L Sbjct: 117 DIPSYRCKPQDFITMKDRQKYQAIISKNIDFYQKYKIPNHLTYSSLEKKGLVTQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|37683568|gb|AAQ98835.1| small ribosomal protein 4 [Pogonatum piliferum] Length = 190 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRFRNLPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNH+H+LVNG VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMALTIPEARQLVNHKHILVNGHIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I +K + + + + +++ +P Y++ N + ++ L Sbjct: 117 YRCKPQDFITIKDRQESQILIEKNIDFSQKYKIPNYLTFNFLDKKGLINQL---LNRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|194738522|gb|ACF93818.1| small ribosomal protein 4 [Leptoscyphus cuneifolius] gi|194738524|gb|ACF93819.1| small ribosomal protein 4 [Leptoscyphus cuneifolius] gi|194738526|gb|ACF93820.1| small ribosomal protein 4 [Leptoscyphus cuneifolius] gi|194738554|gb|ACF93834.1| small ribosomal protein 4 [Leptoscyphus cuneifolius] gi|194738556|gb|ACF93835.1| small ribosomal protein 4 [Leptoscyphus cuneifolius] gi|194738562|gb|ACF93838.1| small ribosomal protein 4 [Leptoscyphus cuneifolius] Length = 177 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + ++ + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQMINR---EWINLKINELLVVEYYSR 175 >gi|11228625|gb|AAG33098.1| small ribosomal protein 4 [Cynodontium jenneri] Length = 166 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I Sbjct: 1 TSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNI 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K A +++ Sbjct: 60 IFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQDFITIKNRQKSQAIIIKNVDF 119 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 120 SQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 164 >gi|146261547|gb|ABQ15083.1| ribosomal protein S4 [Altingia excelsa] Length = 177 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88 G L Q R K S + ++L K K++ +YG ++E++ + A +++G T L Sbjct: 1 RPRAGSDLRHQSRSGKRSQYRIRLEEKXKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVL 59 Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I + + K Sbjct: 60 LQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQK 119 Query: 149 QLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A V + R ++P +++++ +I S + + LVVE+YSR Sbjct: 120 SRALVQNYLDSSPREELPNHLTLHLFQYKGLVNQIIDSK---WVSLKINELLVVEYYSR 175 >gi|37992579|gb|AAR06468.1| small ribosomal protein 4 [Lepyrodontopsis trichophylla] Length = 187 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LNRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|32401775|gb|AAP80876.1| small ribosomal protein 4 [Keteleeria davidiana] Length = 189 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K P Y + K S + ++L KQK++ +YG ++E++ Sbjct: 2 RLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I SY Sbjct: 57 VRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK DVI ++ + + A + + L +RD +P +++ N +I S Sbjct: 117 PCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFNSLQYKGFINQIIDSK---WIS 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|18920751|gb|AAL82420.1| ribosomal protein system 4 [Isopterygium minutirameum] Length = 193 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P + ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 10 PGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 65 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R TI ARQ VNHRH+LVN V+I SYRCK Sbjct: 66 KAKGSTGEVLLQLPEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 125 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I +K + K + + + ++ +P +++ N +I + + Sbjct: 126 DLITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQIIDR---ESIGLKINE 182 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 183 LLVVEYYSR 191 >gi|63191667|gb|AAY34795.1| small ribosomal protein subunit 4 [Noguchiodendron sphaerocarpum] Length = 190 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G ++P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPGLAIETPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE R D +++R TI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAHTIPGARQLVNHRHILVNDCIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I +K + K + + + ++ +P +++ + +I L Sbjct: 117 YRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 GLKINELLVVEYYSR 188 >gi|293611962|gb|ADE48425.1| ribosomal protein 4 [Ceratozamia kuesteriana] gi|293611964|gb|ADE48426.1| ribosomal protein 4 [Ceratozamia microstrobila] Length = 183 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +R+ R+ S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRC D Sbjct: 57 AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCNPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + + A + + L+++D +P +++++ +I S + + Sbjct: 117 VITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVHQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|118577583|gb|ABL07157.1| small ribosomal protein 4 [Piper hispidum] Length = 169 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 5/171 (2%) Query: 37 HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RL Sbjct: 1 RSQPRSWKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAGKAKGSTGRVLLQLLEMRL 59 Query: 97 DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156 D I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + + V + Sbjct: 60 DNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQNS 119 Query: 157 SQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A R ++P++++++ +I S + + LVVE+YSR Sbjct: 120 MDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 167 >gi|172072915|ref|YP_001806676.1| ribosomal protein S4 [Cryptomeria japonica] gi|171854934|dbj|BAG16674.1| ribosomal protein S4 [Cryptomeria japonica] gi|239794302|dbj|BAH73299.1| ribosomal protein S4 [Cryptomeria japonica] gi|239794385|dbj|BAH73381.1| ribosomal protein S4 [Cryptomeria japonica] Length = 207 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 11/211 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R+ K+P R+ P + KPS + ++L+ KQ+++ Sbjct: 1 MSRYRGPRLKIINRLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--M 175 +LVN R V+I SYRCK D I +K K + + + ++D VP +++ Sbjct: 118 ILVNDRIVDIPSYRCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQY 177 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + + LVVE+YSR Sbjct: 178 SGLVKKIIDNNR---IGLKINELLVVEYYSR 205 >gi|118577565|gb|ABL07148.1| small ribosomal protein 4 [Piper cordulatum] Length = 176 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 7 LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAGKAKGSTGQVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + + V Sbjct: 66 LDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQN 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 126 SMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 174 >gi|58293883|gb|AAW69888.1| small ribosomal protein 4 [Zygodon bartramioides] Length = 189 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D+I +K + K + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDLITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LDREFIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|24473802|gb|AAL82744.1| small ribosomal subunit protein 4 [Leptostomum inclinans] Length = 185 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 58 KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + ++ P +++ N +I L + + Sbjct: 118 DFITIKDRQKSQAIISKNIDFYQKYKTPNHLTYNSLKKKGLVNQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|194738550|gb|ACF93832.1| small ribosomal protein 4 [Leptoscyphus sp. 1 ND-2008] Length = 177 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 13/187 (6%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 +PKS RS K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LKPKSNYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKT 51 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY C+ GD+ Sbjct: 52 KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDI 111 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 + ++ + K + + + L ++ +P +++ + + + +I + + + L Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSITQIINR---EWINLKINELL 168 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 169 VVEYYSR 175 >gi|162415086|gb|ABX89117.1| ribosomal protein S4 [Pottia intermedia] Length = 189 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + ++ K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITINERKKSQIMITKNVDFCQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|94962381|gb|ABF48497.1| small ribosomal protein subunit 4 [Paranapiacabaea paulista] Length = 193 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 5 RLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 60 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 61 VRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYMVDIPSY 120 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ N +I L Sbjct: 121 RCKPQDFITIKNQHKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESID 177 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 LKINELLVVEYYSR 191 >gi|63101079|gb|AAY33164.1| small ribosomal protein 4 [Rhizofabronia persoonii] Length = 188 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ +NHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVNDFIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNKRNSQTIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LNRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|63191813|gb|AAY34866.1| small ribosomal protein subunit 4 [Microbryum davallianum] Length = 191 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 3 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI Y Sbjct: 59 VRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPXY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K + + +++ +P +++ N +I L Sbjct: 119 RCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|7576631|gb|AAF63928.1| ribosomal protein system 4 [Climacium americanum] Length = 186 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ +K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLRSSS---INQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|52783271|sp|Q6H9K8|RR4_EQUPA RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927207|emb|CAE47539.1| small ribosomal protein 4 [Equisetum palustre] Length = 207 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I R NL G + ++ Q + K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLRII-RRLRNLPGLTNKLIESKKNQASGSDQSNQKKVSQYCIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R VPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V+I S+ CK D+I + + + + + A+ +P+++++ Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|184127939|gb|ACC67869.1| ribosomal protein small subunit 4 [Marattia kaulfussii] Length = 194 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K+ + ++ Q K S + ++L AKQ+++ YG ++E++ Sbjct: 1 RRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I S Sbjct: 58 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKD 188 YRCK D+I V+ + + + + +D +PE+++++ + RI + Sbjct: 118 YRCKPKDIISVRDQPNSQILMKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD-- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -SIGLNINELLVVEYYSR 192 >gi|166836604|gb|ABY90534.1| ribosomal protein small subunit 4 [Pilularia americana] gi|166836610|gb|ABY90537.1| ribosomal protein small subunit 4 [Pilularia americana] Length = 200 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K+ ++ Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKIIRRLKSLPGLTGKASKQKKTRV--AADQPTSKKISQFCVRLEAKQRLRFNYG-VTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD +V+ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P ++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198 >gi|37992403|gb|AAR06380.1| small ribosomal protein 4 [Achrophyllum dentatum] Length = 194 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G + P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGVLPGLTNRIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + + +++G T L+ LE RLD I++R PTI ARQ +NHRH+LVN V Sbjct: 57 QLLNYVRISRKAKGSTGDILLQLLEMRLDNIIFRLGMSPTIPGARQLINHRHILVNDCMV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ + +++ + +I L Sbjct: 117 DIPSYRCKPRDFITIKNQRKSEDIINKNIEFYQKFKISNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|307828392|gb|ADN94994.1| small ribosomal protein 4 [Fossombronia altilamellosa] Length = 186 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 2 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 59 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + + L ++ P +++++ + + + + + Sbjct: 119 DVITVRNRHKSQSIIARSMGLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|254935419|gb|ACT88097.1| ribosomal protein S4 [Pseudopanax colensoi var. colensoi] Length = 181 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 5/179 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 + + + D +P++++++ +I S + + LVVE+YS Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYS 178 >gi|37992679|gb|AAR06518.1| small ribosomal protein 4 [Squamidium brasiliense] Length = 188 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D + +K + K + + + ++ +P +++ +I L + Sbjct: 117 CKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|62287264|sp|Q6H9K4|RR4_EQUSY RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927215|emb|CAE47543.1| small ribosomal protein 4 [Equisetum sylvaticum] Length = 207 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I R NL G V ++ Q + K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQASGSDQSNQKKVSQYCIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R VPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V+I S+ CK D+I + + + + + A+ +P+++++ Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|12330526|gb|AAG52800.1| ribosomal protein 4 [Mitthyridium constrictum] Length = 189 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG ++E++ + Sbjct: 1 RLGTLSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 +CK D I K + K +++ ++ + + P +++ N +I L Sbjct: 117 QCKSQDFITXKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---LNQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|194738518|gb|ACF93816.1| small ribosomal protein 4 [Leptoscyphus cleefii] Length = 177 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + ++ + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVNQMINR---EWINLKINELLVVEYYSR 175 >gi|125662724|gb|ABN50312.1| small ribosomal protein 4 [Ephedra trifurca] Length = 203 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62 + K+ RR+ K P + +H R K S + + L+ KQK++ +Y Sbjct: 1 YRGPRFKLIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 56 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+L Sbjct: 57 G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177 VN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201 >gi|17025810|gb|AAL32072.1| ribosomal protein 4 [Syrrhopodon perarmatus] Length = 194 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K+P S + K S + ++L KQK++ +YG ++E+ Sbjct: 1 VKILRRLGTLSGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-LTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V Sbjct: 57 QLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLTPTIPGARQLVNHRHILVNNRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLK 187 NI SY+CK D I +K + K +++ + + P ++ N +I L Sbjct: 117 NIPSYQCKPQDFITIKDQQKYQTRIIKNTNFFPKHKTPNHLIFNSREKRGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 QESIGLKINELLVVEYYSR 192 >gi|146261573|gb|ABQ15096.1| ribosomal protein S4 [Liquidambar styraciflua] Length = 167 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I + + K A V Sbjct: 60 ILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQKSRALVQNYLA 119 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P +++++ +I S + + LVVE+YSR Sbjct: 120 SSPREELPNHLTLHLFQYKGLVNQIIDSK---WVSLKINELLVVEYYSR 165 >gi|14090476|gb|AAK53523.1| small ribosomal protein 4 [Holomitrium vaginatum] Length = 182 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 72 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDSITIKDRQKSQAMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ + +I L + + LVVE+YSR Sbjct: 132 NIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|42794712|gb|AAS45751.1| Rps4 [Thibaudia densiflora] Length = 211 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 15/214 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K +R ++K K Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFXKKKKSXXHIRPQEKQKL 56 Query: 61 YYGD-ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 + ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHR Sbjct: 57 GFXXGLTERQLLKSXRXAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHR 116 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNH 172 HVLVNGR ++I SYRCK D+I ++KSK S L R VP ++++N Sbjct: 117 HVLVNGRIIDIPSYRCKPRDIITAREKSKALIQNSFQNLFDLPSRKRKRKRVPYHLTLNR 176 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 177 GQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|284468539|gb|ADB90330.1| ribosomal protein subunit 4 [Scleropodium cespitans] Length = 187 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|146261587|gb|ABQ15103.1| ribosomal protein S4 [Micranthes integrifolia] Length = 173 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 5/175 (2%) Query: 33 GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92 G L Q R K S + ++L KQK++ +YG I+E++ + A +++G T L+ L Sbjct: 1 GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAGKAKGSTGQVLLQLL 59 Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK D+I K + K Sbjct: 60 EMRLDNILFRLGMASTIPGARQLVNHRHILVNGGIVDIPSYRCKPRDIITAKDEQKSRTL 119 Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + ++P+Y++++ +I + + + LVVE+YSR Sbjct: 120 IQNSLDSSPHEELPKYLTLHPLQQKGLVNQIIDNK---WVGLKINELLVVEYYSR 171 >gi|14090478|gb|AAK53524.1| small ribosomal protein 4 [Amphidium californicum] Length = 182 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 72 LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 132 NVDFSQKSKVPNHLTFNSLEKKGLVNKI---LDQESIGLKINELLVVEYYSR 180 >gi|254935395|gb|ACT88085.1| ribosomal protein S4 [Raukaua simplex] Length = 181 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +Y ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHY-XLTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + D +P++++++ +I S + + LVVE+YSR Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179 >gi|37992651|gb|AAR06504.1| small ribosomal protein 4 [Pilotrichidium callicostatum] Length = 188 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGILPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH++VN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITIKNQRKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LDXESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|42405290|gb|AAS13471.1| rps4 small ribosomal protein [Achrophyllum quadrifarium] Length = 194 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G + P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VRIIRRLGVLPGLTNRIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + + +++G T L+ LE RLD I++R PTI ARQ +NHRH+LVN V Sbjct: 57 QLLNYVRISRKAKGSTGDILLQLLEMRLDNIIFRLGMSPTIPGARQLINHRHILVNDCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ + +++ + +I L Sbjct: 117 DIPSYRCKPRDFITIKNRRKSEDIINKNIEFYQKSKISNHLTYSFLEKKGLVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|307828411|gb|ADN95003.1| small ribosomal protein 4 [Austrofossombronia australis] Length = 186 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K + ++L KQK++ +YG ++E++ + A Sbjct: 2 LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK G Sbjct: 59 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K + + ++ L ++ P +++++ + + + + + Sbjct: 119 DVITVRNRQKSQSIIAKSIILFQKPKAPNHLTLDSTRLRGSINQTIDRD---WINLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|121761808|gb|ABM64990.1| ribosomal protein S4 [Plagiomnium acutum] Length = 185 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 58 KAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I +K + K + + ++ +P +++ N N +I + + Sbjct: 118 DLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD---SIDLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|11275973|gb|AAG33845.1| small ribosomal protein 4 [Leucoloma sp. La Farge 5555] Length = 188 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + P + ++ K S + ++L KQK++ +YG ++E++ + Sbjct: 1 LGTLPGLTTQIPELKSNS---INHSTSNKKISQYRVRLEEKQKLRFHYG-LTERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVISRLGIAPTIPGARQLVNHRHILVNNCIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 C D I +K + L+ + +++ VP +++ N +I + Sbjct: 117 CXPXDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGXVNQIIDQ---ESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992687|gb|AAR06522.1| small ribosomal protein 4 [Squamidium macrocarpum] Length = 189 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTISGARQLVNHRHILVNECIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D + +K + K + + + ++ +P +++ +I L Sbjct: 117 RCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|77019153|emb|CAH60182.1| chloroplast 30S ribosomal protein S4 [Grimmia caespiticia] Length = 188 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 5 PGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 60 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 61 KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQ 120 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ N +I L + + Sbjct: 121 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 177 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 178 LLVVEYYSR 186 >gi|18920761|gb|AAL82425.1| ribosomal protein system 4 [Orthothecium intricatum] Length = 188 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 FRTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K A + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|154505142|ref|ZP_02041880.1| hypothetical protein RUMGNA_02655 [Ruminococcus gnavus ATCC 29149] gi|153794621|gb|EDN77041.1| hypothetical protein RUMGNA_02655 [Ruminococcus gnavus ATCC 29149] Length = 181 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 +R K S +GLQLR KQK K YG + EK FR+ + +A + G T NL+ LESRLD Sbjct: 17 KRANRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKAKQMEGMTGENLMILLESRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R F T ARQ V+H+HVLVNG+ VNI SY K GDVIE+K+K K + + Sbjct: 76 VMFRMGFARTRKEARQIVDHKHVLVNGKQVNIPSYLVKAGDVIEIKEKHKDCQRYKDILE 135 Query: 159 LAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P+++ V+ +N+ T +PS V + L+VE YS+ Sbjct: 136 VTGGNMIPDWLEVDAENLKGTVKELPSR---EAIDVPVDEMLIVELYSK 181 >gi|32401781|gb|AAP80879.1| small ribosomal protein 4 [Abies fraseri] Length = 189 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 R + K P Y + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RPLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I S Sbjct: 56 YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK DVI ++ + + A + + L +RD+ P +++ N +I S Sbjct: 116 YPCKPQDVITIRDQQRLRAIIRKNIDLFQRDILPNHLTFNSLQYKGFINQIIDSK---WI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 SLKINELLVVEYYSR 187 >gi|32401806|gb|AAP80891.1| small ribosomal protein 4 [Pachysandra procumbens] Length = 187 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 11/195 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LV GR V I S Sbjct: 56 YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVXGRIVXIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I K + K A + + ++P++++++ +I S Sbjct: 116 YRCKPRDIITAKDEQKSXALIQNYLDSSPHEELPKHLTLHS--FQGLVNQIIDSK---WV 170 Query: 192 PVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 171 GLKINELLVVXYYSR 185 >gi|289599945|gb|ADD12923.1| ribosomal protein S4 [Pinzona coriacea] Length = 181 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P L Q R K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK D+ Sbjct: 56 KGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDI 115 Query: 141 IEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I VK + K A + ++P++++++ +I S + + L Sbjct: 116 ITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELL 172 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 173 VVEYYSR 179 >gi|33413199|emb|CAD86735.1| ribosomal protein small subunit 4 [Leucoloma sprengelianum] Length = 188 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + P + ++ K S + ++L KQK++ +YG ++E++ + Sbjct: 1 LGTLPGLTTQIPELKSNS---INHSTSNKKISQYRVRLEEKQKLRFHYG-LTERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD ++ R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RIARKAKGSTGQVLLQLLEMRLDNVISRLGIAPTIPGARQLVNHRHILVNNCIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + L+ + +++ VP +++ N +I + Sbjct: 117 CKPQDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|293611958|gb|ADE48423.1| ribosomal protein 4 [Bowenia spectabilis] Length = 182 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G +R+ R+ S + ++L KQK++ +YG ++E++ + A R+ Sbjct: 1 GLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLQYVRIAGRA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R TI ARQ VNHRH+LVN R V+I SYRCK DV Sbjct: 57 KGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 116 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I V+ + + A + + L+++D +P +++++ +I S + + L Sbjct: 117 ITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|162415082|gb|ABX89115.1| ribosomal protein S4 [Hilpertia velenovskyi] Length = 189 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITINDRKKSQVMISKNVDFSQKYKIPNHLTFNSLEKKGLINQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|14090494|gb|AAK53532.1| small ribosomal protein 4 [Paraleucobryum enerve] Length = 183 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+ +S K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTXPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 58 KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I ++ + K A +++ +++ +P +++ + +I L + + L Sbjct: 118 ITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELL 174 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 175 VVEYYSR 181 >gi|184128007|gb|ACC67903.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128017|gb|ACC67908.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128033|gb|ACC67916.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128053|gb|ACC67926.1| ribosomal protein small subunit 4 [Angiopteris boninensis] gi|184128057|gb|ACC67928.1| ribosomal protein small subunit 4 [Angiopteris durvilleana] gi|184128067|gb|ACC67933.1| ribosomal protein small subunit 4 [Angiopteris smithii] gi|184128071|gb|ACC67935.1| ribosomal protein small subunit 4 [Archangiopteris hokouensis] Length = 190 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + Q K S + ++L AKQ+++ +G ++E++ + A Sbjct: 1 DLPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ V + + +D +PE+++ + + RI + + Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 DINELLVVEYYSR 188 >gi|42718060|gb|AAS38452.1| rps4 [Splachnum melanocaulon] Length = 189 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 RCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576641|gb|AAF63933.1| ribosomal protein system 4 [Crossomitrium rotundifolium] Length = 190 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K S ++ K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI AARQ VNHRH++VN V+I Sbjct: 57 NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVVNDFLVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I +K K K + + + ++ +P +++ N +I L Sbjct: 117 SYRCKSQDFITIKNKKKSKTIISKNIEFYQKSKIPNHLTYNFLEKKGLVNQI---LDRES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|157689490|gb|ABV65301.1| ribosomal protein S4 [Hua gabonii] Length = 201 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 11/203 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P + L + R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTCKWPRKKKDN---LRKRWRYRKKSQYRIRLEEKQKLRFHYG-LTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 57 QLLKYVRMAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-----DVPEYISVNHDNMVATFVRIP 183 +I SYRCK D+I K + K A + + + + P ++++ +I Sbjct: 117 DIPSYRCKPRDIITAKDEQKSRALIQKYLKSSRHRRTRPKFPNHLTLQGYQYKGVVNQII 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 S K V + LVVE+YSR Sbjct: 177 DS-KWVGLQ-KINELLVVEYYSR 197 >gi|42718056|gb|AAS38450.1| rps4 [Splachnum weberbaueri] Length = 189 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G L G +S K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGV-LPGLTNKTFQLKSSPINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 RCKPEDSITIKDRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDRQ---LIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|293612040|gb|ADE48464.1| ribosomal protein 4 [Zamia vazquezii] Length = 183 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + + R+ S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSINDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD ++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 57 AKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + + A + + L+++D +P +++++ +I S + + Sbjct: 117 VITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|77019185|emb|CAH60198.1| chloroplast 30S ribosomal protein S4 [Grimmia meridionalis] Length = 182 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSL---INQATSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K + +++ +++ +P +++ N +I L + + L Sbjct: 117 ITIKDRQKSQSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|78102691|gb|ABB21559.1| small ribosomal protein 4 [Plagiochila massalongoana] Length = 189 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 8/194 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQVLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I + K K A V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCKPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLV 200 + + LV Sbjct: 176 --EWINLQINELLV 187 >gi|293633979|gb|ADE60369.1| ribosomal protein subunit 4 [Dendroligotrichum microdendron] Length = 183 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 GLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + A + +++ +P +++ N +I L + + Sbjct: 117 FITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|49182772|gb|AAT57848.1| small ribosomal protein [Odontoschisma denudatum] Length = 195 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RAKIIRRLGALPGLTGKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L E RLD + R PTI ARQ VNHRH+ +N Sbjct: 57 RQSSKYVRIARKAKGSTGQVLPQLPEMRLDNTILRLGMAPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 ++I SY + GD+I +K K K + + L ++ +P +++ + + + ++ + Sbjct: 117 IDIPSYDREPGDIITIKDKQKSRSIITRNINLFQKSKIPSHLTFDLTQLQGSVNQMVNR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVNLKINELLVVEYYSR 193 >gi|33413179|emb|CAD86768.1| ribosomal protein small subunit 4 [Seligeria polaris] Length = 182 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 D +++R PTI ARQ VNHRH+LVN VNI SYRCK D +K + K A +++ Sbjct: 72 SDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSYRCKPQDFFTIKDRQKSQAMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 132 NIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIGLKINELLVVEYYSR 180 >gi|22854707|gb|AAN09773.1| small ribosomal protein 4 [Eucamptodontopsis brittoniae] Length = 175 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 6 INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 64 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 65 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDSITIKDRQKSQAMIIK 124 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ + +I L + + LVVE+YSR Sbjct: 125 NIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 173 >gi|32401779|gb|AAP80878.1| small ribosomal protein 4 [Tsuga canadensis] Length = 188 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 12/197 (6%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+ K P + + K S + ++ KQK++ YG ++E++ Sbjct: 1 IIRRLKTLPGLTSKRPKSRNDSI-------NRRKISQYRIRPEEKQKLRFNYG-LTERQL 52 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A ++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I Sbjct: 53 LKYVRIARXTKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDI 112 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK DVI ++ + + A + + L +RD +P++++ N +I S Sbjct: 113 PSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK--- 169 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 170 WISLKINELLVVEYYSR 186 >gi|293634103|gb|ADE60431.1| ribosomal protein subunit 4 [Polytrichastrum sexangulare] Length = 185 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSGYINQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 58 RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + A + +++ +P +++ N +I L + + Sbjct: 118 DFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRELIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|22854681|gb|AAN09760.1| small ribosomal protein 4 [Brothera leana] Length = 185 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 58 KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K V + +L+++ VP +++ N +I L + + Sbjct: 118 DFITIKNRQKSQFIVAKNIELSQKYKVPNHLTFNSLEKKGLVNQI---LNKESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|22854699|gb|AAN09769.1| small ribosomal protein 4 [Dicranoloma blumii] Length = 191 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 4 FRTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 59 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 60 RIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 119 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I VK + K A +++ +++ VP +++ + +I L + Sbjct: 120 CKPQDFITVKNRQKSQAMIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESIGL 176 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 177 KINELLVVEYYSR 189 >gi|7576767|gb|AAF63980.1| small ribosomal protein 4 [Oligotrichum parallelum] Length = 182 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A R+ Sbjct: 1 LTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + + A + +++ +P +++ N +I L + + L Sbjct: 117 ITIKDQQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|38000439|gb|AAR06424.1| small ribosomal protein 4 [Diaphanodon procumbens] Length = 196 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 +I RR+G K+P S ++ K S + ++L KQK++ +YG I+E+ Sbjct: 3 VRIIRRLGPLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 58 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V Sbjct: 59 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 118 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 119 DIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LD 175 Query: 188 DVPYPVIMQPNLVVE 202 + + LVVE Sbjct: 176 RESIGLKINELLVVE 190 >gi|89112923|gb|ABD61080.1| ribosomal protein subunit 4 [Campylostelium pitardii] gi|89112925|gb|ABD61081.1| ribosomal protein subunit 4 [Campylostelium pitardii] gi|89112927|gb|ABD61082.1| ribosomal protein subunit 4 [Campylostelium pitardii] Length = 172 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSYRCKPQDFITIKNRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L+ + + LVVE+YSR Sbjct: 122 NIDFSQKYKVPNHLTFNSLEKKGLVNQI---LQHESIGLKINELLVVEYYSR 170 >gi|291544483|emb|CBL17592.1| SSU ribosomal protein S4P [Ruminococcus sp. 18P13] Length = 198 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 10/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ + K R +G + S + R+ + K S +G+QL+ KQK+K Sbjct: 1 MAVSKEPILKRCRHLGISPMVMGISKNSNRNP-----NANSRKKVSEYGMQLKEKQKLKF 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK F F+ A++ G NLI+ LESRLD + YR T ARQ V HRH Sbjct: 56 IYGVL-EKPFYHYFEIAEKMEGKAGDNLITLLESRLDNVAYRMGMALTRREARQLVTHRH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179 VNG+ VNI SYR KEGDVI + + S+ + + A R VP ++ N +N Sbjct: 115 FTVNGQRVNIPSYRVKEGDVIALYEGSRSSQKFKDVLEQTANRPVPLWLEANKENFSVKV 174 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P ++D+ Y V + +L+VE YS+ Sbjct: 175 TRMP-KVEDLDYEV--EAHLIVELYSK 198 >gi|297179939|gb|ADI23949.1| small ribosomal protein 4 [Ambuchanania leucobryoides] Length = 184 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P + Y ++ K S + ++L KQK++ +YG I+E++ + A Sbjct: 1 PGLTNKTPQSKSIY---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD +++R PTI ARQ VNHRHVLVN +VNI SYRCK Sbjct: 57 RAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVLVNNHTVNIPSYRCKPR 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I ++ + K A + + + P +++++ +I + + Sbjct: 117 DFIIIRDRQKSQAIITRSMDYFQSYKTPNHLTLDSSQKKGLINQIIDR---ESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|184128061|gb|ACC67930.1| ribosomal protein small subunit 4 [Angiopteris sp. China] Length = 190 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + Q K S + ++L AKQ+++ +G ++E++ + A Sbjct: 1 DLPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ V + + +D +PE+++++ + RI + + Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 DINELLVVEYYSR 188 >gi|194738532|gb|ACF93823.1| small ribosomal protein 4 [Leptoscyphus infuscatus] gi|194738534|gb|ACF93824.1| small ribosomal protein 4 [Leptoscyphus infuscatus] Length = 177 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD + ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDTLTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + ++ + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGFVNQMINR---EWINLKINELLVVEYYSR 175 >gi|37992661|gb|AAR06509.1| small ribosomal protein 4 [Pseudotrachypus martinicensis] Length = 187 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|89112921|gb|ABD61079.1| ribosomal protein subunit 4 [Campylostelium strictum] Length = 172 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K K A +++ Sbjct: 62 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFINIKDGQKSQAMIIK 121 Query: 156 ASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++D +P +++ N +I L + + LVVE+YSR Sbjct: 122 NVDFSQKDKIPNHLTFNSLEKKGLVNQI---LNHESVGLKINELLVVEYYSR 170 >gi|37992597|gb|AAR06477.1| small ribosomal protein 4 [Meteoriella soluta] Length = 189 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLTNKTPQLKSSS---IXQSXSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNKI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|11228639|gb|AAG33105.1| small ribosomal protein 4 [Ditrichum flexicaule] gi|33413211|emb|CAD86740.1| ribosomal protein small subunit 4 [Ditrichum flexicaule] gi|77019137|emb|CAH60175.1| chloroplast 30S ribosomal protein S4 [Ditrichum flexicaule] Length = 181 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K+P + ++ K S + ++L KQK++ +YG I+E++ + + A +++ Sbjct: 1 TNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAK 56 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I Sbjct: 57 GSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFI 116 Query: 142 EVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 + + K A +++ +++ VP +++ N +I L + + LV Sbjct: 117 TINDRQKSQAVIIKNIGFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIGLKINELLV 173 Query: 201 VEFYSR 206 VE+YSR Sbjct: 174 VEYYSR 179 >gi|194738498|gb|ACF93806.1| small ribosomal protein 4 [Leptoscyphus australis] Length = 177 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGEVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY CK GD++ ++ K K + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSYNCKPGDILTIRNKQKSQFIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + ++ + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVNQMINR---EWINLKINELLVVEYYSR 175 >gi|227345137|gb|ACP28121.1| small ribosomal protein 4 [Clasmatocolea obvoluta] Length = 191 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + SY + K S + ++L KQK++ +YG +SE++ Sbjct: 3 RVGAFPGLTSTTLKPISSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-MSERQLLKS 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE R D ++R TI ARQFVNHRH+ +N V+I SY Sbjct: 59 MRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQFVNHRHISINNDIVDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 C+ GD+I V+ K K + + + L ++ +P +++ + + + ++ Sbjct: 119 NCEPGDIITVRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMIDR---EWIN 175 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 LKINELLVVEYYSR 189 >gi|77019177|emb|CAH60194.1| chloroplast 30S ribosomal protein S4 [Grimmia khasiana] Length = 184 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTPQLKSSL---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHIVNIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ N +I L + + Sbjct: 117 DFITIKDRQKSQAMIIKNMNFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|62287265|sp|Q6H9K7|RR4_EQUPT RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927209|emb|CAE47540.1| small ribosomal protein 4 [Equisetum pratense] Length = 207 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I R NL G V ++ Q + K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQVSGSDQSNQKKVSQYCIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R VPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V+I S+ CK D+I + + + + + A+ +P+++++ Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|194738552|gb|ACF93833.1| small ribosomal protein 4 [Leptoscyphus sp. 2 ND-2008] Length = 177 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N +NI SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDILNIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + +I + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175 >gi|121761806|gb|ABM64989.1| ribosomal protein S4 [Plagiomnium arbuscula] Length = 185 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGPTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E+R D I++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 58 KAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + ++ +P++++ N N +I + + Sbjct: 118 DFITIKDRQKSQTMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD---SIDLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|37992539|gb|AAR06448.1| small ribosomal protein 4 [Hampeella pallens] Length = 194 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G K P + ++ K S + ++L KQK++ +YG I+E+ Sbjct: 1 VKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG-ITER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + + A +++G T L+ LE RLD I++R PTI ARQ VNHR +LVN V Sbjct: 57 QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLNMAPTIPGARQLVNHRQILVNNCIV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLK 187 NI SYRCK D I VK + + +++D +P ++ + +I L Sbjct: 117 NIPSYRCKPQDFIIVKNLKNSEVKMNKNKDFSQKDKIPNHLIYSSLEKKGLVNKI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|32401777|gb|AAP80877.1| small ribosomal protein 4 [Tsuga caroliniana] Length = 188 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 12/197 (6%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ K P + + K S + ++ KQK++ YG ++E++ Sbjct: 1 LIRRLKTLPGLTSKRPKSRNDSI-------NRRKISQYRIRPEEKQKLRFNYG-LTERQL 52 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I Sbjct: 53 LKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDI 112 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK DVI ++ + + + + + L +RD +P++++ N +I S Sbjct: 113 PSYPCKPQDVITIRDQQRLRSIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK--- 169 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 170 WISLKINELLVVEYYSR 186 >gi|313183929|ref|YP_004021783.1| ribosomal protein S4 [Equisetum arvense] gi|52783273|sp|Q6H9L6|RR4_EQUAR RecName: Full=30S ribosomal protein S4, chloroplastic gi|62287268|sp|Q6H9L3|RR4_EQUFL RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927191|emb|CAE47531.1| small ribosomal protein 4 [Equisetum arvense] gi|48927197|emb|CAE47534.1| small ribosomal protein 4 [Equisetum fluviatile] gi|281371649|gb|ADA63582.1| ribosomal protein S4 [Equisetum arvense] Length = 207 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I R NL G V ++ + Q + K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQASGNDQSNQKKVSQYCIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R VPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V+I S+ CK D+I + + + + + A+ +P+++++ Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEQKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205 >gi|14090492|gb|AAK53531.1| small ribosomal protein 4 [Leucobryum sanctum] Length = 186 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+ +S K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTXSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 KGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K + V + + +++ VP +++ + +I L + + L Sbjct: 118 ISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFDSLEKKGLVNQI---LNHESIGLKINELL 174 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 175 VVEYYSR 181 >gi|15145824|gb|AAK83530.1| rps4 [Splachnum rubrum] Length = 189 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 RCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLIYNSLKNQGLVNQILDRQ---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|12330528|gb|AAG52801.1| ribosomal protein 4 [Fissidens bushii] Length = 189 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G +P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGILQGLTNXTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE+R D I++R+ PTI ARQ VNHRH+LVN VNI SY Sbjct: 57 VRIARKAKGSTGQVLLQLLETRPDNIIFRSGMTPTIPGARQLVNHRHILVNDHIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K +++ +++ ++P +++ N +I L Sbjct: 117 RCKPQDFITIKDQQKYQVMIIKNINFSQKYEIPNHLTFNSLEKKGLVKQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|284468551|gb|ADB90336.1| ribosomal protein subunit 4 [Homalothecium nuttallii] Length = 187 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T + LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|157689500|gb|ABV65306.1| ribosomal protein S4 [Irvingia malayana] Length = 182 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P G L Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRP----RAGSDLRNQYRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAAK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK D Sbjct: 56 AKGSTGQVLLQLLEMRLDNILFRLGMSSTIPRARQLVNHRHILVNGCIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I + + K A + + + ++P+++++ +I S + + Sbjct: 116 IITARDEQKSRAMIQNYLDSSPQEELPKHLTLYPFQYKGLVTQIIDSK---WVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|42718084|gb|AAS38464.1| rps4 [Tayloria mirabilis] Length = 189 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKAKGSTGEILLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P + N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFHQKYKIPNNLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|311223018|gb|ADP76591.1| small ribosomal protein 4 [Pellia neesiana] Length = 189 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + S G +K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L LE RLD I++R PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQILSQTLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDNTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY C+ DVI V + K+ + + VP +++ + + + Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---ECI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 DLKINELLVVEYYSR 187 >gi|293633967|gb|ADE60363.1| ribosomal protein subunit 4 [Alophosia azorica] Length = 183 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P Y ++ K S + ++L KQK++ +YG I+E++ + A Sbjct: 1 GLTNKTPQLKSGY---INQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAKG 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R P+I ARQ VNH+H+LVN VNI SYRCK D Sbjct: 57 AKGSTGQILLQLLEMRLDNIIFRLGMAPSIPGARQLVNHKHILVNDCIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A +L+ +++ +P +++ N +I L + + Sbjct: 117 FITIKNRQKSQAIILKNMDFSQKYKIPNHLTFNSFEKKGLVNQI---LDRELIDLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|42718088|gb|AAS38466.1| rps4 [Tayloria purpurascens] Length = 188 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKIPQLKSNP---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RVARKTKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + A + + + ++ +P ++ N +I L + Sbjct: 117 CKPQDFITIKNRQNSQAIINKNIEFHQKYKIPTHLIYNSLKKQGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992605|gb|AAR06481.1| small ribosomal protein 4 [Neobarbella comes] Length = 184 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ N +I L + + Sbjct: 117 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|14090496|gb|AAK53533.1| small ribosomal protein 4 [Paraleucobryum longifolium] gi|14090498|gb|AAK53534.1| small ribosomal protein 4 [Paraleucobryum longifolium] Length = 183 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 14 INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 72 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I ++ + K A +++ Sbjct: 73 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIEDRQKSQAMIIK 132 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ + +I L + + LVVE+YSR Sbjct: 133 NIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 181 >gi|125662718|gb|ABN50309.1| small ribosomal protein 4 [Ephedra sp. Tibet-7] Length = 205 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 14/211 (6%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60 S+ + KI RR+ P + +H R K S + + L+ KQK++ Sbjct: 1 SRDRGPRFKIIRRLKTLPGLTSTRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175 +LVN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 ILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQN 175 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 KGIVNKIIDTKD---LQLKIKEMLVIEYYSR 203 >gi|125662722|gb|ABN50311.1| small ribosomal protein 4 [Ephedra tweediana] Length = 203 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62 + KI RR+ K P + +H R K S + + L+ KQK++ +Y Sbjct: 1 YRGPRFKIIRRLKPLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 56 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+L Sbjct: 57 G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177 VN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201 >gi|184128049|gb|ACC67924.1| ribosomal protein small subunit 4 [Angiopteris angustifolia] Length = 190 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + Q K S + ++L AKQ+++ +G ++E++ + A Sbjct: 1 DLPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYIRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ V + + +D +PE+++ + + RI + + Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 DINELLVVEYYSR 188 >gi|22854745|gb|AAN09792.1| small ribosomal protein 4 [Braunfelsia dicranoides] Length = 191 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 7 LPGLTNKTPQLKSGSINQSASNKK--VSQYRIRLEEKQKLRFHYG-ITERQLLNHVRIAR 63 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 64 KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRVVNIPSYRCKPR 123 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ VP +++ + +I L + + Sbjct: 124 DFITIKDRQKSQAIIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 180 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 181 LLVVEYYSR 189 >gi|74273089|gb|ABA01244.1| ribosomal protein S4 [Passiflora podlechii] gi|74273121|gb|ABA01260.1| ribosomal protein S4 [Passiflora lobbii subsp. ayaucuchoensis] Length = 183 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGQTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|14090486|gb|AAK53528.1| small ribosomal protein 4 [Timmiella crassinervis] Length = 182 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L QK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEENQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A + + Sbjct: 72 LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFITIKDRQKSQAMITK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ VP +++ N +I L + + LVVE+YSR Sbjct: 132 NVDFFQKSKVPNHLTFNSLQKKGLVNQI---LDRESIGLKINELLVVEYYSR 180 >gi|157689426|gb|ABV65269.1| ribosomal protein S4 [Brexia madagascariensis] Length = 181 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P G L Q R K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LTSKRP----RVGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R T+ ARQ VNHRH+LVNGR V+I SYRCK D+ Sbjct: 56 KGSTGEILLQLLEMRLDNILFRLGMASTVPQARQLVNHRHILVNGRIVDIPSYRCKPRDI 115 Query: 141 IEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I K + K + +VP++++++ +I S + + L Sbjct: 116 ITAKDEQKSRTLIQNYLDSFPHEEVPKHLTLHPIQYKGLVNQIIDSK---SIGLKINELL 172 Query: 200 VVEFYSR 206 +VE+YSR Sbjct: 173 IVEYYSR 179 >gi|162415134|gb|ABX89141.1| ribosomal protein S4 [Didymodon rigidulus var. ditrichoides] Length = 189 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|162415108|gb|ABX89128.1| ribosomal protein S4 [Didymodon hedysariformis] Length = 189 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|37548845|gb|AAO32691.1| ribosomal protein 4 [Notoligotrichum australe] Length = 184 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + +S + + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 PGLTNKTLQLKSGYINQAVSNKIFS--QYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYRCK D Sbjct: 58 AKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRCKPQD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + A + + +++ +P +++ N +I L + + Sbjct: 118 FITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|293611992|gb|ADE48440.1| ribosomal protein 4 [Encephalartos bubalinus] gi|293612000|gb|ADE48444.1| ribosomal protein 4 [Encephalartos manikensis] Length = 183 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +R+ R+ S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 57 AKGSTGQVLLQLLEMRSDNTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + K A + + L+++D +P +++++ +I S + + Sbjct: 117 VITVRDQQKSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|162415118|gb|ABX89133.1| ribosomal protein S4 [Bryoerythrophyllum inaequalifolium] Length = 188 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 4 LPGLSNKIPHLKSSSTNQ--PTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVAR 60 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 61 KAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 120 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I + + K + + +++ +P +++ N +I L + + Sbjct: 121 DFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKRGLINQI---LDQESIGLKINE 177 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 178 LLVVEYYSR 186 >gi|51860467|gb|AAU11370.1| ribosomal protein small subunit 4 [Gnetum parvifolium] Length = 199 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 10/204 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P + R K S L+ KQK++ ++G + Sbjct: 1 GPRFKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R + + +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN Sbjct: 57 TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182 VNI SY+CK DVI +K K + ++ E +P +++++ +I Sbjct: 117 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 177 IDRKD---IQLNIKEMLVIEYYSR 197 >gi|32892128|gb|AAP89003.1| ribosomal protein S4 [Passiflora rufa] Length = 183 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GTLPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGPVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ +P ++++ +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPWNKLPTHLTLYPKKYKGLVNQIIDSK---WVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INEFLVIEYYSR 181 >gi|307828432|gb|ADN95013.1| small ribosomal protein 4 [Fossombronia pusilla] Length = 184 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + +S +K + ++L KQK++ +YG ++E++ + A + Sbjct: 1 PGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVARK 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNH+H+LV+ +VNI SY CK GD Sbjct: 58 AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPGD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + K + + + L ++ P +++++ + + + + + Sbjct: 118 VITVRNRQKSQSIIARSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|49182732|gb|AAT57828.1| small ribosomal protein [Jubulopsis novae-zelandiae] Length = 186 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 20 STSNKKISQYRIRLEEKQKLRFHYG-VTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++ PTI ARQ VNHRH+ +N +V+I SY C+ GD+I ++ + K + + + Sbjct: 79 TIFCLGMAPTIPGARQLVNHRHISINNETVDIPSYNCEPGDIITIRNREKSQSIITKNLN 138 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P ++++N + + + + LVVE+YSR Sbjct: 139 SFHKSEIPNHLTLNSTQLRGSINTTIHR---EWIDLKVNELLVVEYYSR 184 >gi|42556472|gb|AAS19831.1| small ribosomal protein 4 [Odontoschisma sp. He-Nygren 702] Length = 191 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G + K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGASPGLTGKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQSS 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L LE RLD V+R PTI ARQ VNHRH+ +N ++I Sbjct: 57 KYVRIARKAKGSTGQVLPQLLEMRLDNTVFRLGMAPTIPGARQLVNHRHISINNDIIDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY + GD+I +K K K + + + L ++ +P +++ + + + +I + Sbjct: 117 SYDREPGDIITIKDKQKSRSIITKNINLFQKSKIPSHLTFDLTQLQGSVNQIVNR---EW 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 VNLKINELLVVEYYSR 189 >gi|32401765|gb|AAP80871.1| small ribosomal protein 4 [Pinus canariensis] Length = 184 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P N + + K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 R++G T L+ LE RLD I++R PTI ARQ VNH H+ +N V+I SY CK Sbjct: 56 RRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGHIRINDHMVDIPSYPCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 DVI ++ + + A + + L +RD +P +++ + +I S + + Sbjct: 116 QDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFINQIIDSK---WINLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|37992547|gb|AAR06452.1| small ribosomal protein 4 [Hildebrandtiella endotrichelloides] gi|37992553|gb|AAR06455.1| small ribosomal protein 4 [Hildebrandtiella pachyclada] Length = 187 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY+C Sbjct: 57 IARKTKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNCIVDIPSYQC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|42718090|gb|AAS38467.1| rps4 [Tayloria callophylla] Length = 189 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P + ++ K S + ++L KQK++ + G I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSNP---INQSTANKKISQYRIRLEEKQKLRFHXG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNH H+LVN V+I SY Sbjct: 57 VRIARKTKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHXHILVNDHXVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P ++ N +I L Sbjct: 117 RCKPQDFITIKNRQKSQAIINKNIEFHQKYKIPTHLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576647|gb|AAF63936.1| ribosomal protein system 4 [Adelothecium bogotense] Length = 189 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 2 RLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LVN V+I SY Sbjct: 58 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMATTIPGARQLVNHRHILVNNFIVDIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 118 RCKPQDFITIKNQRKSEVIINKNIEFYQKSKIPNHLTYSSLEKKGVVNQI---LDCKSIG 174 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 LKINELLVVEYYSR 188 >gi|121761763|gb|ABM64968.1| ribosomal protein S4 [Plagiomnium rostratum] Length = 186 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGPTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E R D I++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + ++ +P++++ N N +I + + Sbjct: 119 DFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD---SIDLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|15145822|gb|AAK83529.1| rps4 [Splachnum ampullaceum] Length = 189 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEILLQLLEMRLDNIIFRLGXAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 RCKPQDFITIKDRQKSQXIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|254935415|gb|ACT88095.1| ribosomal protein S4 [Pseudopanax linearis] Length = 181 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 + + ++P++++++ +I S + + LVVE+YS Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYS 178 >gi|33413163|emb|CAD86718.1| ribosomal protein small subunit 4 [Dryptodon torquatus] Length = 181 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 12 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 70 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 71 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 130 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 131 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 179 >gi|225387211|ref|ZP_03756975.1| hypothetical protein CLOSTASPAR_00963 [Clostridium asparagiforme DSM 15981] gi|225046690|gb|EEG56936.1| hypothetical protein CLOSTASPAR_00963 [Clostridium asparagiforme DSM 15981] Length = 159 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 5/163 (3%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S +GLQLR KQK K YG + EK FR+ + +A + G NL+ LE RLD +++R Sbjct: 1 MSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKASKMNGMVGTNLMILLECRLDNVLFRMG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERD 163 T RQ V+H+HVLVNG+ VNI SYR K GDVIE+K+K K + + R Sbjct: 60 LGRTRKETRQIVDHKHVLVNGKPVNIPSYRVKTGDVIEIKEKYKSAQRYKDILEVTGGRM 119 Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP ++ V+ +N+ T +P+ + V + L+VE YS+ Sbjct: 120 VPAWLDVDQENLRGTVKEMPTRDE---IDVPVNEMLIVELYSK 159 >gi|293611986|gb|ADE48437.1| ribosomal protein 4 [Dioon merolae] Length = 183 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +R+ R+ S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 57 AKGSTGQVLLQLLEMRSDNTIFRPGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + + A + + L+++D +P +++++ +I S + + Sbjct: 117 VITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|170516249|gb|ACB15126.1| small ribosomal protein 4 [Macrozamia moorei] Length = 186 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +R+ R+ S + ++L KQK++ +YG ++E++ + A Sbjct: 3 LPGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAG 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I YRCK Sbjct: 59 RAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPGYRCKPR 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + K A + + L+++D + +++++ +I S + + Sbjct: 119 DVITVRDQQKSRAMIEKNIDLSQKDQMSNHLTLHSSRYKGLVNQIIDSK---WISLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|255116232|gb|ACU01168.1| small ribosomal protein subunit 4 [Sematophyllum subpinnatum] Length = 189 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 2 FGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 58 RIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ N +I L + Sbjct: 118 CKPQDFITIKNQQKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|77019197|emb|CAH60204.1| chloroplast 30S ribosomal protein S4 [Grimmia plagiopodia] Length = 185 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K P S ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 PGLTNKIPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ +P +++ N +I L + + Sbjct: 118 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|11878077|gb|AAG40786.1| small ribosomal protein 4 [Tetraphis pellucida] gi|12330460|gb|AAG52767.1| ribosomal protein 4 [Tetraphis pellucida] Length = 186 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P Y ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 VLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A R++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 57 ARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + +++ +P ++++N ++ L + + Sbjct: 117 PQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LDREFIDLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|89112959|gb|ABD61098.1| ribosomal protein subunit 4 [Grimmia hartmanii] Length = 172 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + +++ Sbjct: 62 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSKSMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSSENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|24473826|gb|AAL82756.1| small ribosomal subunit protein 4 [Rhodobryum roseum] Length = 187 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P + ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GALPGPTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYIR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRC Sbjct: 57 IARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 + D I +K + K A + + L ++ P +++ N +I L + Sbjct: 117 RPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|108861104|gb|ABG21424.1| ribosomal protein small subunit 4 [Marsilea nubica var. gymnocarpa] Length = 200 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKLIRRLKSLPGLTGKAPNPRESRV--ASDQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|37683564|gb|AAQ98833.1| small ribosomal protein 4 [Pogonatum neglectum] Length = 177 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 14 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNILF 72 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + + A + + ++ Sbjct: 73 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQ 132 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 133 KYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINELLVVEYYSR 175 >gi|74273141|gb|ABA01270.1| ribosomal protein S4 [Passiflora tricuspis] Length = 183 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIAGSAFL-------RSGKKSQYWIRLEEKQKLRFHYG-VTERQLLKYAR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|157689448|gb|ABV65280.1| ribosomal protein S4 [Clusia rosea] Length = 179 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 2 KRPRVGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAAKAKGSTGQV 60 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRH+L+NG VNI SYRCK D+I + + Sbjct: 61 LLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILINGHIVNIPSYRCKPRDIITARDEQ 120 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 K A + + R ++P+++++ +I S + + LVVE+YSR Sbjct: 121 KSRAMIQNYLDSSSREELPKHLTLRPFEYKGLVNQIIDSK---WVGLKINELLVVEYYSR 177 >gi|74273125|gb|ABA01262.1| ribosomal protein S4 [Passiflora organensis] Length = 183 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|63191855|gb|AAY34887.1| small ribosomal protein subunit 4 [Aschisma carniolicum] Length = 172 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 6 SNSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + + Sbjct: 65 VIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVD 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 125 FSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 170 >gi|63191819|gb|AAY34869.1| small ribosomal protein subunit 4 [Dolotortula mniifolia] Length = 190 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGTLPRLSNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI S Sbjct: 57 YVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D I + + K + + ++ +P ++ N +I L Sbjct: 117 YRCKPQDFITINDRKKSQIMITKNLDFFQKSKIPNHLIFNSLEKKGLINQI---LDQESI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 DLKINELLVVEYYSR 188 >gi|194738536|gb|ACF93825.1| small ribosomal protein 4 [Leptoscyphus intermedius] Length = 177 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 13/187 (6%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 +PKS RS K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 1 LKPKSSYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKT 51 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I SY C+ GD+ Sbjct: 52 KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDI 111 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 + ++ + K + + + L ++ +P ++ + + + +I + + + L Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLIFDPIKLRGSITQIINR---EWINLKINELL 168 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 169 VVEYYSR 175 >gi|37683576|gb|AAQ98839.1| small ribosomal protein 4 [Pogonatum belangeri] Length = 179 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 16 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 74 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + K A + + ++ Sbjct: 75 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFIIIKNRQKSQAIIAKNIDFSQ 134 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 135 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 177 >gi|262192906|gb|ACY30470.1| small ribosomal subunit protein 4 [Pohlia annotina] Length = 188 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGALPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K V + ++ +P ++ N N +I L + Sbjct: 117 CKPQDFITIKDRQKSQTMVSKNIDFYQKYKIPNNLTYNSLNKKGLVNQI---LDRESIDL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|289599939|gb|ADD12920.1| ribosomal protein S4 [Hibbertia dilatata] gi|289599941|gb|ADD12921.1| ribosomal protein S4 [Hibbertia juncea] Length = 167 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNH+H+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 ILFRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDLITVKDEHKSRALIQNFLD 119 Query: 159 LA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P+++++ +I S + + LVVE+YSR Sbjct: 120 SSLHEELPKHLTLQPFQYKGLVNQIIDSK---WIGLQINELLVVEYYSR 165 >gi|162415084|gb|ABX89116.1| ribosomal protein S4 [Syntrichia sinensis] Length = 189 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K + + +++ +P +++ N +I L Sbjct: 117 RCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|49182780|gb|AAT57852.1| small ribosomal protein [Pleurozia purpurea] gi|75858240|gb|ABA28694.1| small ribosomal protein 4 [Pleurozia purpurea] Length = 189 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ SY L K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGALXGLTNKTLKLKSSY---LDRSMSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A + +G T L+ LE RLD ++R VPTI ARQ VNHRH+L+N V+I SY Sbjct: 57 VRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPGARQLVNHRHILINDNIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 C+ GDVI +K K + + + +R +P ++ ++ + Sbjct: 117 NCEPGDVIAIKNPEKNQSIITKNMNSFQRPKIPNHLVLDSTQFRGLVNKTIDR---ECID 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVEFYSR Sbjct: 174 LKINELLVVEFYSR 187 >gi|15145862|gb|AAK83549.1| rps4 [Tayloria mirabilis] Length = 189 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRVARKAKGSTGEILLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P + N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFHQKYKIPNNLIYNSLKKQGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|7576635|gb|AAF63930.1| ribosomal protein system 4 [Lepidopilum surinamense] Length = 188 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGILPGLTNKITELKSSS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R PTI AARQ VNHRH++VN V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVVNDYIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITIKNQRKSEAIIKKNIEFYQKIKIPNHLTYNFVEKKGLINQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|254995551|emb|CAO82733.1| ribosomal protein S4 [Lycopodium sabinifolium] Length = 172 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 6 STPSXXXSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + +S+ A + + ++ Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNE 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++++ +I + LVVE+YSR Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 170 >gi|293633989|gb|ADE60374.1| ribosomal protein subunit 4 [Lyellia aspera] Length = 183 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P Y + K S + ++L KQK++ +YG I+E++ + A Sbjct: 1 GLTNKTPQLKSGYS---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARG 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A + + +++ +P +++ N +I L + + Sbjct: 117 FITIKDRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEQKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|37683550|gb|AAQ98826.1| small ribosomal protein 4 [Pogonatum comosum] Length = 176 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 13 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 71 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + + A + + ++ Sbjct: 72 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQ 131 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 132 NYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINELLVVEYYSR 174 >gi|22854701|gb|AAN09770.1| small ribosomal protein 4 [Dicranoloma menziesii] Length = 185 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTSQLKSSSINQ--STSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 58 KAKGSTGQVLLQLLEMRLDNVIFRLGMXPTIPGARQLVNHRHILVNDRVVDIPSYRCKPR 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A +++ +++ VP +++ + +I L + + Sbjct: 118 DFITIKDRRKSEAIIIKNIDFSQKHKVPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|162415098|gb|ABX89123.1| ribosomal protein S4 [Didymodon perobtusus] Length = 189 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 2 FRTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 58 RIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + +++ +P +++ N +I L + Sbjct: 118 CKPQDFITIKDRQKSQVIITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIGL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|118577555|gb|ABL07143.1| small ribosomal protein 4 [Piper aduncum] Length = 179 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 2 KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAGKAKGSTGRV 60 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + Sbjct: 61 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + V + A R ++P++++++ +I S + + LVVE+YSR Sbjct: 121 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 177 >gi|77019173|emb|CAH60192.1| chloroplast 30S ribosomal protein S4 [Grimmia hartmanii] Length = 176 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 7 INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + +++ Sbjct: 66 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSKSMIIK 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 126 NMDFSQKYKIPNHLTFNSSENKGLINQI---LDHESIGLKINELLVVEYYSR 174 >gi|311223008|gb|ADP76586.1| small ribosomal protein 4 [Pellia epiphylla] gi|311223010|gb|ADP76587.1| small ribosomal protein 4 [Pellia epiphylla] Length = 189 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + S G +K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGTLPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L LE RLD I++R PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY C+ DVI V + K+ + + VP +++ + + + Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---ECI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 DLKINELLVVEYYSR 187 >gi|218157217|gb|ACK58425.1| ribosomal protein subunit 4 [Lyellia crispa] Length = 186 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S +K S + ++L KQK++ +YG I+E++ + A Sbjct: 2 LPGLTNKTSQLKSGYSNQSVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 ++G T L+ LE RLD I+++ PTI ARQ VNH+H+LVN R VNI SYRCK Sbjct: 59 GAKGSTGQILLQLLEMRLDNIIFQLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + ++ +P +++ N +I L + + Sbjct: 119 DFITIKDRQKSQAIIAKNIDFYQKYKIPNHLTFNSLEQKGLVNQI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|11228645|gb|AAG33108.1| small ribosomal protein 4 [Fissidens dubius] Length = 186 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 4 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 59 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ E RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 60 AKGSTGQVLLQLPEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQD 119 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K +++ +++ +P +++ N +I L + + Sbjct: 120 FITIKDQQKYQVMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQI---LDQESIGLKINEL 176 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 177 LVVEYYSR 184 >gi|14090474|gb|AAK53522.1| small ribosomal protein 4 [Fissidens mooreae] Length = 182 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + K +++ Sbjct: 72 LDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKARQKSQVMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 132 NVNFSQKYKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|37683578|gb|AAQ98840.1| small ribosomal protein 4 [Pogonatum usambaricum] Length = 180 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 17 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 75 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + K A + + ++ Sbjct: 76 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFIIIKNRQKSQAIIAKNIDFSQ 135 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 136 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|7524703|ref|NP_042457.1| ribosomal protein S4 [Pinus thunbergii] gi|1173263|sp|P41638|RR4_PINTH RecName: Full=30S ribosomal protein S4, chloroplastic gi|1262697|dbj|BAA04412.1| ribosomal protein S4 [Pinus thunbergii] Length = 198 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++L KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G + I+ E RLD + + T ARQ VNH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKG-SRVRSIAITEMRLDKS-FSIGYGST-SGARQLVNHGH 112 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 113 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 172 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 173 NQIIDSK---WINLKINELLVVEYYSR 196 >gi|184127945|gb|ACC67872.1| ribosomal protein small subunit 4 [Marattia alata] gi|184127947|gb|ACC67873.1| ribosomal protein small subunit 4 [Marattia douglasii] Length = 190 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + Q K S + ++L AKQ+++ +G ++E++ + A Sbjct: 1 DLPGLTNKTLKSKKAQIAI-DQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ V + + +D +PE+++++ + RI + + Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDKIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 NINELLVVEYYSR 188 >gi|108861074|gb|ABG21409.1| ribosomal protein small subunit 4 [Marsilea crotophora] Length = 200 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+P S Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSVLEGNKPKGVVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|12330502|gb|AAG52788.1| ribosomal protein 4 [Macromitrium richardii] Length = 189 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L K+K++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKRKLRFHYG-ITERQLLNC 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K K + + ++ +P ++ +I L Sbjct: 117 RCKPLDFITIKDGQKSQDIINKNIDFYQKSKIPNHLIHXSLEKKGXVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|92417463|gb|ABE76827.1| ribosomal protein subunit 4 [Eurhynchium praelongum] Length = 189 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLXTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P +++ + +I L Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|77019201|emb|CAH60206.1| chloroplast 30S ribosomal protein S4 [Grimmia sessitana] Length = 195 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 26 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 84 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 85 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 144 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 145 NMDFSQKYKIPNHLTFNSLENKGLVNQI---LDHESIGLKINELLVVEYYSR 193 >gi|89147842|gb|ABD62769.1| ribosomal protein 4 [Takakia ceratophylla] Length = 168 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ ++G ++E++ + A R++G T + LE RLD Sbjct: 2 STXNXKXSQYRIRLEEKQKLRFHHG-LTERQLFKYVRIARRAKGSTGQVPLQLLEMRLDN 60 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R PTI ARQ VNHRH+LVN R+VNI S+RCK D I +K + K A + + Sbjct: 61 VIFRLGMAPTIPGARQLVNHRHILVNDRTVNIPSFRCKPQDFITIKDRQKSQAIITKNMD 120 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P ++++N +I + + LVVE+YSR Sbjct: 121 CSQKSKIPNHLTLNSSQKRGLVNQIIDR---ESIGLKINELLVVEYYSR 166 >gi|63101017|gb|AAY33133.1| small ribosomal protein 4 [Pterogoniadelphus montevidensis] Length = 186 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 57 ARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K A + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|67035873|gb|AAY62863.1| small ribosomal protein subunit 4 [Clastobryella kusatsuensis] Length = 188 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE R D +++R TI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I + Sbjct: 117 CKPQDFITIKNQRKSETMISKNIEFYQKSKIPNHLTYSSLEKKGLVNQIVDR---ELIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|20531062|gb|AAM27353.1| ribosomal protein 4 [Atrichum altecristatum] Length = 187 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P Y ++ K S ++L KQK++ +YG I+ ++ + + Sbjct: 1 GALPGLTNKTPQLKSGY---INQAVSNKKISQXRIRLEEKQKLRFHYG-ITXRQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RLD I++R TI ARQ VNH+H+LVN VNI SYRC Sbjct: 57 IARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDHIVNIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + + A + + +++ +P +++ N +I L Sbjct: 117 KPQDFITIKDRQESQAIIARKNDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGXK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|311223000|gb|ADP76582.1| small ribosomal protein 4 [Noteroclada confluens] gi|311223004|gb|ADP76584.1| small ribosomal protein 4 [Noteroclada confluens] gi|311223006|gb|ADP76585.1| small ribosomal protein 4 [Noteroclada confluens] Length = 171 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 4/171 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 5 INQPTSSKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGEVLLQLLEMR 63 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD ++R TI ARQ VNHRH+L+N V+I SY C+ GDVI VK + + + + + Sbjct: 64 LDNTIFRLGMSSTIPGARQLVNHRHILINDNMVDIPSYNCEPGDVITVKNRRESQSIIAK 123 Query: 156 ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++++N + ++ + + + LVVE+YSR Sbjct: 124 NMEFQRPKIPNHLTLNSIQFQGSVNQVINR---ECIDLKINELLVVEYYSR 171 >gi|74273101|gb|ABA01250.1| ribosomal protein S4 [Passiflora candida] Length = 183 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++ + KQK++ +YG I+E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRFQEKQKLRLHYG-ITERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P++++++ I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLHRIQYKGLVNEIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|254995571|emb|CAO82744.1| ribosomal protein S4 [Lycopodium casuarinoides] Length = 172 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S +G++L KQK++ +YG ++E++ + A R++G T L+ LE RLD Sbjct: 6 STPSKKFSQYGIRLEEKQKLRFHYG-LTEQQLLKYVRIARRAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + + + A + + + Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRPESRAIIAKNEK 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++++ +I + + LVVE+YSR Sbjct: 125 FYQTCKIPNHLTLDSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170 >gi|12642254|gb|AAK00209.1| rps4 [Goniomitrium acuminatum] Length = 189 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 2 LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 58 RVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I + + K + + +++ +P +++ N +I L + Sbjct: 118 CKPQDFITINDRKKSQVMISKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESIGL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|254935399|gb|ACT88087.1| ribosomal protein S4 [Pseudopanax lessonii] gi|254935401|gb|ACT88088.1| ribosomal protein S4 [Pseudopanax lessonii] gi|254935403|gb|ACT88089.1| ribosomal protein S4 [Pseudopanax crassifolius] gi|254935405|gb|ACT88090.1| ribosomal protein S4 [Pseudopanax crassifolius] gi|254935407|gb|ACT88091.1| ribosomal protein S4 [Pseudopanax lessonii] gi|254935409|gb|ACT88092.1| ribosomal protein S4 [Pseudopanax gilliesii] gi|254935411|gb|ACT88093.1| ribosomal protein S4 [Pseudopanax ferox] gi|254935417|gb|ACT88096.1| ribosomal protein S4 [Pseudopanax chathamicus] gi|254935449|gb|ACT88112.1| ribosomal protein S4 [Pseudopanax ferox] gi|254935451|gb|ACT88113.1| ribosomal protein S4 [Pseudopanax ferox] Length = 181 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + D +P+++++ +I S + + LVVE+YSR Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLRPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179 >gi|14090470|gb|AAK53520.1| small ribosomal protein 4 [Leucobryum tahitense] Length = 182 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 16 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K + V + + Sbjct: 75 IIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIE 134 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++++ +I L + + LVVE+YSR Sbjct: 135 FSQKYKVPNHLTLDSLEKKGLVNQI---LNHESIGLKINELLVVEYYSR 180 >gi|51860569|gb|AAU11421.1| ribosomal protein small subunit 4 [Ephedra gerardiana] Length = 205 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 4 RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 59 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LV Sbjct: 60 -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 118 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178 N V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 119 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 178 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 179 VNKIIDTKD---LQLKIKEMLVIEYYSR 203 >gi|118626069|emb|CAL39338.1| small ribosomal protein 4 [Isopaches decolorans] Length = 153 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 86/155 (55%), Gaps = 5/155 (3%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK++ +YG ++E++ + A +++G T L+ LE RLD ++R PTI A Sbjct: 1 EEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGA 59 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171 RQ VNHRH+ VN +V+I SY C+ GD+I +K K K + + + L ++ +P +++ + Sbjct: 60 RQLVNHRHISVNNDTVDIPSYNCEPGDIITIKNKQKSQSIITKNINLFQKLKIPSHLTFD 119 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + + + LVVE+YSR Sbjct: 120 LTQLRGSINQTVNR---EWVNLKINELLVVEYYSR 151 >gi|11228647|gb|AAG33109.1| small ribosomal protein 4 [Fissidens subbasilaris] Length = 185 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 3 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ E RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 59 AKGSTGQVLLQLPEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K +++ +++ +P +++ N +I L + + Sbjct: 119 FITIKDQQKYQIMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQI---LDQESIGLKINEL 175 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 176 LVVEYYSR 183 >gi|51860481|gb|AAU11377.1| ribosomal protein small subunit 4 [Ephedra aphylla] Length = 203 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62 + KI RR+ K P + +H R K S + + L+ KQK++ +Y Sbjct: 1 YGGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 56 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+L Sbjct: 57 G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177 VN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201 >gi|254935427|gb|ACT88101.1| ribosomal protein S4 [Pseudopanax laetus] Length = 181 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I+ R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQXLEMRLDNILXRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + ++P++++++ +I S + + LVVE+YSR Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179 >gi|37992733|gb|AAR06545.1| small ribosomal protein 4 [Zelometeorium recurvifolium] Length = 187 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ E RLD I++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D + +K + K + + + ++ +P +++ +I L + Sbjct: 117 KPQDFVTMKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|63191845|gb|AAY34882.1| small ribosomal protein subunit 4 [Anoectangium aestivum] Length = 186 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I E++ + + A +++G T L+ LE RLD +++R Sbjct: 25 KISQYRIRLEEKQKLRFHYG-IXERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 83 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K + + +++ Sbjct: 84 GMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDFITIKNRQKSQVMITKNIDFSQKS 143 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 144 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 184 >gi|157689542|gb|ABV65327.1| ribosomal protein S4 [Polygala cruciata] Length = 179 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 12/188 (6%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P + R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKRPRALINKP-------RFRKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 52 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK D Sbjct: 53 AKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGHIVDIPSYRCKPQD 112 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I + K A + + + + +P++++++ +I S + + Sbjct: 113 IITARDNQKSRALIQNYLESSPHEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 169 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 170 LVVEYYSR 177 >gi|293634003|gb|ADE60381.1| ribosomal protein subunit 4 [Notoligotrichum sp. Hedderson 14147] Length = 182 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ V H+H+LVN R VNI SYRCK D I +K + + + + ++ Sbjct: 78 RLGMAPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQTIIAKNIDFSQ 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 138 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 180 >gi|51860537|gb|AAU11405.1| ribosomal protein small subunit 4 [Ephedra rupestris] Length = 206 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 6 GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 60 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 61 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 120 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 121 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 180 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 181 NKIIDTKD---LQLKIKEMLVIEYYSR 204 >gi|289599943|gb|ADD12922.1| ribosomal protein S4 [Hibbertia sphenandra] Length = 167 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNH+H+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 ILFRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNFLG 119 Query: 159 LA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P+++++ +I S + + LVVE+YSR Sbjct: 120 SSLHEELPKHLTLQPFQYKGLVNQIIDSK---WIGLQINELLVVEYYSR 165 >gi|194738508|gb|ACF93811.1| small ribosomal protein 4 [Leptoscyphus amphibolius] Length = 177 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD + ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDTLTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ VP +++ + + ++ + + + LVVE+YSR Sbjct: 130 LFQKLKVPSHLTFDPIKLRGFVNQMINR---ESINLKINELLVVEYYSR 175 >gi|162415102|gb|ABX89125.1| ribosomal protein S4 [Didymodon constrictus var. flexicuspis] gi|162415124|gb|ABX89136.1| ribosomal protein S4 [Didymodon rigidulus var. icmadophilus] Length = 188 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYR Sbjct: 57 RVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I + + K + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITINNRKKSQVMIAKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37548889|gb|AAO32713.1| ribosomal protein 4 [Steereobryon subulirostrum] Length = 183 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + A + +++ +P +++ N +I L + + Sbjct: 117 FITIKDRQEFQAIITRNINFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|46810992|gb|AAT01814.1| small ribosomal protein 4 [Austrofossombronia peruviana] Length = 168 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++ Sbjct: 5 NKXMSQYRIRLEEKQKLRFHYG-LTERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIF 63 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LV+ +VNI SY CK GDVI + + + + + ++ L + Sbjct: 64 RLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPGDVITARNRHRSQSIIAKSMSLFQ 123 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P +++++ + + + + + LVVE+YSR Sbjct: 124 RSKTPNHLTLDSTRLRGSINQTIDRD---WIDLKINELLVVEYYSR 166 >gi|52694762|gb|AAU85550.1| Rps4 [Brachytheciastrum trachypodium] gi|52694764|gb|AAU85551.1| Rps4 [Brachytheciastrum venustum] Length = 190 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 6 LPGLTNKTPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 62 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T + LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 63 KAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 122 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 123 DFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 179 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 180 LLVVEYYSR 188 >gi|14090482|gb|AAK53526.1| small ribosomal protein 4 [Campylopus umbellatus] Length = 182 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 16 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRHVLVN VNI SYRCK D I +K + K + + + + Sbjct: 75 IIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIPSYRCKPQDFITIKNRQKSQSIIAKNLE 134 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLNINELLVVEYYSR 180 >gi|125662714|gb|ABN50307.1| small ribosomal protein 4 [Ephedra gerardiana] Length = 206 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 14/211 (6%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60 S+ + KI RR+ K P + +H R K S + + L+ KQK++ Sbjct: 2 SRYRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175 +LVN V+I SYRCK D+I +K K + + + VP Y + N Sbjct: 117 ILVNHHIVDIRSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYSTFNLSQN 176 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 KGIVNKIIDTKN---LQLKIKEMLVIEYYSR 204 >gi|3914845|sp|O20208|RR4_DIEGR RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292835|emb|CAA92536.1| ribosomal protein S4 [Dietes grandiflora] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P + G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRPGS----GSDPKNQSRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPQDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|14090464|gb|AAK53517.1| small ribosomal protein 4 [Hypodontium dregei] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 72 LDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKYQAMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 132 NLDFSQKTKVPNHLTFNSLEKNGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|184127977|gb|ACC67888.1| ribosomal protein small subunit 4 [Marattia sp. New Caledonia] Length = 194 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K+ + ++ Q K S + ++L AKQ+++ YG ++E++ Sbjct: 1 RRLKDLPGLTNKTLKSKKAQI--AIDQPASKKISQYCIRLEAKQRLRFNYG-LTERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I S Sbjct: 58 HVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKD 188 YRCK D+I V+ ++ V + + +D +PE+++++ + RI + Sbjct: 118 YRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD-- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 -SIGLNINELLVVEYYSR 192 >gi|22854743|gb|AAN09791.1| small ribosomal protein 4 [Trichodontium falcatum] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 21 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A + + +++ Sbjct: 80 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDCITIKDRQKSQAMITKNVDFSQKY 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP +++ N +I L + + LVVE+YSR Sbjct: 140 KVPNHLTFNFLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|117306750|emb|CAH73343.1| ribosomal protein S4 [Acrocladium chlamydophyllum] Length = 183 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 AKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A + + + ++ +P +++ + +I L + + Sbjct: 117 FITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|184128013|gb|ACC67906.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128051|gb|ACC67925.1| ribosomal protein small subunit 4 [Angiopteris angustifolia] Length = 189 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + ++ + Q K S + ++L AKQ+++ +G ++E++ + A Sbjct: 1 LPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAG 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194 D+I V+ ++ V + + +D +PE+++ + + RI + + Sbjct: 119 DIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLD 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|32892126|gb|AAP89002.1| ribosomal protein S4 [Passiflora morifolia] Length = 185 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP + R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVRIAV-------SRSGRKSQYCIRLEEKQKLRFHYG-VTERQLLKYAR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIAQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ + +I + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDRK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|17154479|emb|CAC83918.1| ribosomal protein S4 [Diplarrhena latifolia] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQVRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|125662698|gb|ABN50299.1| small ribosomal protein 4 [Metasequoia glyptostroboides] Length = 207 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 11/210 (5%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI R+ K+P RS P + KPS + ++L+ KQ+++ + Sbjct: 2 SRYRGPRLKIINRLKTLPGLSKKTP--NRSEQPSKKKHSKPPKPSKYPVRLKEKQRLRFH 59 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A R++G T L+ LE RLD I++R ++ ARQ +NHRH+ Sbjct: 60 YG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALSMPEARQLINHRHI 118 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MV 176 VN R V+I SYRCK D+I +K K + + + + ++D VP ++++ Sbjct: 119 RVNDRIVDIPSYRCKPQDLISIKDKQRLRNIINKNIDIFQKDKMRVPPHLNLIKKKSQYS 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + + LVVE+YSR Sbjct: 179 GLVKKIIDNNR---IGLKINELLVVEYYSR 205 >gi|32401783|gb|AAP80880.1| small ribosomal protein 4 [Cedrus deodara] Length = 187 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 9/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 + K P Y + K S + ++ KQK++ +YG ++E++ Sbjct: 1 LKALPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R++G T L+ LE RLD I++R PTI ARQ VNH H+ VN V+I SY Sbjct: 56 RIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSYP 115 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK DVI ++ + + + + + L +RD +P +++ N +I S + Sbjct: 116 CKPQDVITIRDQQRLRSIIKKNIDLFQRDKLPNHLTFNSLQYKGFINQIIDSK---WISL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 KINELLVVEYYSR 185 >gi|89112931|gb|ABD61084.1| ribosomal protein subunit 4 [Codriophorus aciculare] Length = 172 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R TI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPHDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|289599953|gb|ADD12927.1| ribosomal protein S4 [Tetracera nordtiana] Length = 167 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165 >gi|225621051|ref|YP_002722309.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1] gi|225215871|gb|ACN84605.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1] Length = 189 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 6/193 (3%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 + + K + + PG ++ K Y G+Q+R KQK+K+ YG + EK+FR+ + Sbjct: 2 LKGDRCLTAKCAITKKRDVPGPANRKMKQLSEY-GIQMREKQKVKRIYGVL-EKQFRNYY 59 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 EA R G + NL+ LE RLD +VYR + ARQFV H + VNG+ + I SY Sbjct: 60 HEAIRVAGVSGENLLRLLELRLDNVVYRLGLAKSRNQARQFVAHGFISVNGKRMTIPSYC 119 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K GD + ++ +A V + + + VP ++S++ N V +P + + YP Sbjct: 120 VKVGDKVSFTERGNAVAEVKTIVEGLKSEYVPAWLSLDLSNKTGEIVTLPIR-EHIEYP- 177 Query: 194 IMQPNLVVEFYSR 206 + L++E+YS+ Sbjct: 178 -INEQLIIEYYSK 189 >gi|22854739|gb|AAN09789.1| small ribosomal protein 4 [Symblepharis vaginata] Length = 185 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 8/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+P S + K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 57 RKAKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNDHIVNIPSYRCKP 116 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + A +++ +++ VP +++ N +I L + + Sbjct: 117 QDFITIKNRQXSQAMIIKNVDFSQKXKVPNHLTFNSLEKKGLVNQI---LDQESIGLKIN 173 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 174 ELLVVEYYSR 183 >gi|125662728|gb|ABN50314.1| small ribosomal protein 4 [Ephedra major] Length = 203 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 2 RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LV Sbjct: 58 -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178 N V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 117 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 176 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 VNKIIDTKD---LQLKIKEMLVIEYYSR 201 >gi|289599957|gb|ADD12929.1| ribosomal protein S4 [Tetracera parviflora] Length = 167 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SSPHEELPKHLTLHAFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165 >gi|299139416|ref|ZP_07032591.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8] gi|298598685|gb|EFI54848.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8] Length = 207 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 8/203 (3%) Query: 8 KHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K+ R +G L G K + R+Y PG HG+ ++ + FGLQLR KQK+ +YG + Sbjct: 6 KFKLQRSLGIELPGLGKPGALAKRNYPPGQHGRAQRPTMTQFGLQLREKQKLLFHYG-LR 64 Query: 67 EKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 E++ R ++A S + +LI LE RLD +V+R F +I AARQ V+H H+LVNG Sbjct: 65 EEQLRRFVRKARSLSASNWIESLIGLLERRLDNVVFRLGFGRSIAAARQLVSHGHILVNG 124 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIP 183 R IGS + G+V+ + +K+ QL ++ + + +P Y+ + + + IP Sbjct: 125 RRQTIGSMVLRPGEVVWLSEKAAQLEAIQSSLESPRLPLPSYLQLQNPGTPSKGIVLFIP 184 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 +S P V E+Y++ Sbjct: 185 NSSH---IPFEFNKKQVAEYYAK 204 >gi|63078654|gb|AAY29413.1| ribosomal protein S4 [Weissia controversa] Length = 186 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 25 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 83 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + + +++ Sbjct: 84 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKS 143 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 144 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 184 >gi|89112939|gb|ABD61088.1| ribosomal protein subunit 4 [Schistidium rivulare] Length = 172 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++D +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKDKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|46811064|gb|AAT01850.1| small ribosomal protein 4 [Xenothallus vulcanicola] Length = 175 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + A ++G T L+ LE RLD IV+ Sbjct: 12 NKKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVF 70 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA- 160 R PTI +ARQ VNHRH++VN +VNI SY CK DVI +K + + + + + L Sbjct: 71 RLGMAPTIPSARQLVNHRHIIVNDNAVNIPSYNCKPQDVITIKDRRESQSVITKNINLFR 130 Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ER +P +++ + + +I + + LVVE+YSR Sbjct: 131 ERKIPNHLTFDSTRFCGSVNQIIDR---EWISLKINELLVVEYYSR 173 >gi|33413171|emb|CAD86721.1| ribosomal protein small subunit 4 [Schistidium crassipilum] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K A +++ +++ +P +++ N +I L + + L Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|33413207|emb|CAD86739.1| ribosomal protein small subunit 4 [Cheilothela chloropus] Length = 185 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 8/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+P S + K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 57 RKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNIPSYRCKP 116 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K + K A +++ +++ VP +++ N +I L + + Sbjct: 117 QDFITIKNRQKSQAMIIKNLTFSQKAKVPNHLTFNSLENKGLVNQI---LDQESIGLKIN 173 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 174 ELLVVEYYSR 183 >gi|77019205|emb|CAH60208.1| chloroplast 30S ribosomal protein S4 [Grimmia tergestina] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K A +++ +++ +P +++ N +I L + + L Sbjct: 117 ITIKDREKSQAIIVKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|37992627|gb|AAR06492.1| small ribosomal protein 4 [Papillaria imponderosa] Length = 186 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 ARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|77019163|emb|CAH60187.1| chloroplast 30S ribosomal protein S4 [Grimmia donniana] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKAPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K A +++ +++ +P +++ N +I L + + L Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|197303838|ref|ZP_03168874.1| hypothetical protein RUMLAC_02577 [Ruminococcus lactaris ATCC 29176] gi|197297131|gb|EDY31695.1| hypothetical protein RUMLAC_02577 [Ruminococcus lactaris ATCC 29176] Length = 181 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 69/169 (40%), Positives = 95/169 (56%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 +R K S +GLQLR KQK K YG + EK FR+ + +A + G T NL+ LESRLD Sbjct: 17 KRANRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKAKQMEGMTGANLMIILESRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +V+R T ARQ V+H+HVLVNG+ VNI SY K GD IE+K+ K E + Sbjct: 76 VVFRLGLARTRKEARQIVDHKHVLVNGKQVNIPSYLVKAGDTIEIKENKKGSQRYKEILE 135 Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A VPE++ + +N+ T +P+ V + L+VE YS+ Sbjct: 136 ATAGNMVPEWLEADAENLKGTVKELPAR---EAIDVPVDEMLIVELYSK 181 >gi|184127931|gb|ACC67865.1| ribosomal protein small subunit 4 [Danaea wendlandii] Length = 190 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 DLPGLTTKTLKSKESQIAMD-PSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R P+I AARQ VNH+H+LVN R V+I SYRCK Sbjct: 59 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHKHILVNNRLVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ + V + ++D +PE+++ + D +I + + Sbjct: 119 KDIINVRNQTNSHSLVKRNLESLDKDKIPEHLTLSLLEDDKPQGLVNKIVTRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 NINELLVVEYYSR 188 >gi|77019147|emb|CAH60179.1| chloroplast 30S ribosomal protein S4 [Grimmia anodon] Length = 182 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K A +++ +++ +P +++ N +I L + + L Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|293612022|gb|ADE48455.1| ribosomal protein 4 [Zamia furfuracea] gi|293612026|gb|ADE48457.1| ribosomal protein 4 [Zamia katzeriana] gi|293612028|gb|ADE48458.1| ribosomal protein 4 [Zamia lacandona] gi|293612030|gb|ADE48459.1| ribosomal protein 4 [Zamia loddigesii] gi|293612032|gb|ADE48460.1| ribosomal protein 4 [Zamia paucijuga] gi|293612034|gb|ADE48461.1| ribosomal protein 4 [Zamia picta] gi|293612036|gb|ADE48462.1| ribosomal protein 4 [Zamia spartea] gi|293612038|gb|ADE48463.1| ribosomal protein 4 [Zamia standleyi] Length = 183 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + + R+ S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSINDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 57 AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + + A + + L+++D +P +++++ +I S + + Sbjct: 117 VITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|293634101|gb|ADE60430.1| ribosomal protein subunit 4 [Polytrichastrum sexangulare] Length = 183 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 GLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + A + +++ +P +++ N +I L + + Sbjct: 117 FITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRELIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|51860491|gb|AAU11382.1| ribosomal protein small subunit 4 [Ephedra monosperma] Length = 203 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 2 RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LV Sbjct: 58 -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178 N V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 117 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 176 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 VNKIIDTKD---LQLKIKEMLVIEYYSR 201 >gi|194738500|gb|ACF93807.1| small ribosomal protein 4 [Leptoscyphus amphibolius] gi|194738502|gb|ACF93808.1| small ribosomal protein 4 [Leptoscyphus amphibolius] gi|194738504|gb|ACF93809.1| small ribosomal protein 4 [Leptoscyphus amphibolius] gi|194738506|gb|ACF93810.1| small ribosomal protein 4 [Leptoscyphus amphibolius] Length = 177 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD + ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDTLTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + ++ + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGFVNQMINR---ESINLKINELLVVEYYSR 175 >gi|15145834|gb|AAK83535.1| rps4 [Voitia hyperborea] Length = 189 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R G K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RXGALPGLTNKTPQLKSSST---NQSXANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R V+I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + + +P +++ N +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFFXKYKIPNHLTYNFLKKQGLVNQI---LDCESIG 173 Query: 193 VIMQPNLVVEFY 204 + + LVVE+Y Sbjct: 174 LKINELLVVEYY 185 >gi|51860503|gb|AAU11388.1| ribosomal protein small subunit 4 [Ephedra regeliana] gi|51860519|gb|AAU11396.1| ribosomal protein small subunit 4 [Ephedra fasciculata] gi|51860575|gb|AAU11424.1| ribosomal protein small subunit 4 [Ephedra monosperma] Length = 202 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 1 RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 56 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LV Sbjct: 57 -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 115 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178 N V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 VNKIIDTKD---LQLKIKEMLVIEYYSR 200 >gi|51860477|gb|AAU11375.1| ribosomal protein small subunit 4 [Gnetum luofuense] Length = 202 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 10/204 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ P + R K S L+ KQK++ ++G + Sbjct: 4 GPRFKIIRRLKTLPGLTSNRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 59 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R + + +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN Sbjct: 60 TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVND 119 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182 VNI SY+CK DVI +K K + ++ E +P +++++ +I Sbjct: 120 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKI 179 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 180 IDRKD---IQLNIKEMLVIEYYSR 200 >gi|311223014|gb|ADP76589.1| small ribosomal protein 4 [Pellia neesiana] Length = 189 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + S G +K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L LE RLD I++R PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY C+ DVI V + K+ + + VP +++ + + + Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---EFI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 DLKINELLVVEYYSR 187 >gi|74273097|gb|ABA01248.1| ribosomal protein S4 [Passiflora amoena] Length = 183 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R ++ S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIARSAF-------SRPARKSQYCIRLHEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P+ ++++ I S + Sbjct: 113 KPRDLITVKDEKKSKDMIQNSLDSFRQEQLPKQLTLHRFQYKGLVNEIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|37992427|gb|AAR06392.1| small ribosomal protein 4 [Neodicladiella pendula] gi|255116234|gb|ACU01169.1| small ribosomal protein subunit 4 [Floribundaria setschwanica] Length = 186 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T + E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 ARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|254995523|emb|CAO82719.1| ribosomal protein S4 [Diphasiastrum alpinum] gi|254995525|emb|CAO82720.1| ribosomal protein S4 [Diphasiastrum alpinum] gi|254995527|emb|CAO82721.1| ribosomal protein S4 [Diphasiastrum complanatum] gi|254995529|emb|CAO82722.1| ribosomal protein S4 [Diphasiastrum complanatum] gi|254995533|emb|CAO82724.1| ribosomal protein S4 [Diphasiastrum complanatum] gi|254995535|emb|CAO82725.1| ribosomal protein S4 [Diphasiastrum digitatum] gi|254995539|emb|CAO82727.1| ribosomal protein S4 [Lycopodium henryanum] gi|254995541|emb|CAO82728.1| ribosomal protein S4 [Lycopodium issleri] gi|254995543|emb|CAO82729.1| ribosomal protein S4 [Lycopodium issleri] gi|254995545|emb|CAO82730.1| ribosomal protein S4 [Lycopodium madeirense] gi|254995549|emb|CAO82732.1| ribosomal protein S4 [Diphasiastrum oellgaardii] gi|254995553|emb|CAO82734.1| ribosomal protein S4 [Diphasiastrum sitchense] gi|254995555|emb|CAO82735.1| ribosomal protein S4 [Lycopodium thyoides] gi|254995559|emb|CAO82737.1| ribosomal protein S4 [Diphasiastrum tristachyum] gi|254995561|emb|CAO82738.1| ribosomal protein S4 [Lycopodium veitchii] gi|254995563|emb|CAO82739.1| ribosomal protein S4 [Lycopodium wightianum] gi|254995565|emb|CAO82741.1| ribosomal protein S4 [Lycopodium zeilleri] gi|254995567|emb|CAO82742.1| ribosomal protein S4 [Lycopodium zeilleri] gi|255977012|emb|CAO82740.1| ribosomal protein S4 [Lycopodium zanclophyllum] Length = 172 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 6 STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + +S+ A + + ++ Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNE 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++++ +I + LVVE+YSR Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 170 >gi|51860559|gb|AAU11416.1| ribosomal protein small subunit 4 [Ephedra fragilis] Length = 204 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 4 GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 58 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 59 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 118 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 119 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 178 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 179 NKIIDTKD---LQLKIKEMLVIEYYSR 202 >gi|254935397|gb|ACT88086.1| ribosomal protein S4 [Pseudopanax crassifolius] Length = 181 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEXKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR VBI SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVBIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + D +P+++++ +I S + + LVVE+YSR Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLRPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179 >gi|194738520|gb|ACF93817.1| small ribosomal protein 4 [Leptoscyphus cuneifolius] Length = 177 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G L+ LE RLD Sbjct: 11 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSXGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R TI ARQ VNHRH+ +N V+I SY C+ GD++ ++ + K + + + Sbjct: 70 TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + + ++ + + + LVVE+YSR Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQMINR---EWINLKINELLVVEYYSR 175 >gi|74273243|gb|ABA01321.1| ribosomal protein S4 [Paropsia brazzaeana] Length = 200 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 14/193 (7%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P + + R K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGFTSKKPRD-------ESAESRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKGPIGLVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K + K + + + +PE+++ + + +I + Sbjct: 113 KPRDLITAKDEQKSKDMIQNSLNSFPKGKKLPEHLTFDPFH-KGLVNQIIDRK---WVGL 168 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 169 QINELLVVEYYSR 181 >gi|77019161|emb|CAH60186.1| chloroplast 30S ribosomal protein S4 [Grimmia dissimulata] Length = 177 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 8 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNH+H+LVN R VNI SYRCK D I +K + K + +++ Sbjct: 67 LDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPSYRCKPQDFITIKDRQKSQSMIIK 126 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 127 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 175 >gi|184128037|gb|ACC67918.1| ribosomal protein small subunit 4 [Angiopteris fokiensis] Length = 189 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + ++ + Q K S + ++L AKQ+++ +G ++E++ + A Sbjct: 1 LPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAG 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194 D+I V+ ++ V + + +D +PE+++++ + RI + + Sbjct: 119 DIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLD 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|66866247|gb|AAY57792.1| small ribosomal protein 4 [Bescherellia elegantissima] Length = 194 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 13/199 (6%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIASY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVRIPSSLK 187 RCK D I +K + K A + D +P +++ + +I L Sbjct: 117 RCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LD 173 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 RESIGLKINELLVVEYYSR 192 >gi|125662706|gb|ABN50303.1| small ribosomal protein 4 [Ginkgo biloba] Length = 185 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P G + K S + ++L KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----KSGNDPINRSSSGKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE R D I++R+ TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 56 ARKAKGSTGQVLLQLLEMRSDNIIFRSGMALTIPGARQLVNHRHLLVNDRVVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 DVI ++ + + A + L++RD +P +++++ RI S + + Sbjct: 116 PQDVITIRDQQRSRAIIKNNINLSQRDKMPNHLTLHSSQYKGLVNRIIDSK---WINLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|77019155|emb|CAH60183.1| chloroplast 30S ribosomal protein S4 [Grimmia crinita] Length = 182 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHKHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K A +++ +++ +P +++ N +I L + + L Sbjct: 117 ITIKNRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|293612014|gb|ADE48451.1| ribosomal protein 4 [Microcycas calocoma] Length = 176 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 9 NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 67 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + + A + + Sbjct: 68 NTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIDKNL 127 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 128 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WINLKINELLVVEYYSR 174 >gi|74273119|gb|ABA01259.1| ribosomal protein S4 [Passiflora lobbii subsp. obtusiloba] Length = 183 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGQTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIMDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|293612020|gb|ADE48454.1| ribosomal protein 4 [Zamia angustifolia] Length = 183 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + + R+ S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSINDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 57 AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + + A + + L+++D +P +++++ +I S + + Sbjct: 117 VITVRDQQRSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|293634017|gb|ADE60388.1| ribosomal protein subunit 4 [Oligotrichum obtusatum] Length = 178 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 15 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 73 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN R VNI SYRCK D I +K + + A + ++ Sbjct: 74 RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 133 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 134 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 176 >gi|89112929|gb|ABD61083.1| ribosomal protein subunit 4 [Bucklandiella heterosticha] Length = 172 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R TI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|33413205|emb|CAD86738.1| ribosomal protein small subunit 4 [Ceratodon purpureus] Length = 182 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K +++ + +++ VP +++ N +I L + + L Sbjct: 117 ITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI---LDQESVGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|77019149|emb|CAH60180.1| chloroplast 30S ribosomal protein S4 [Dryptodon anomalus] Length = 182 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 57 KGSTGQALLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K + +++ +++ +P +++ N +I L + + L Sbjct: 117 ITIKNRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|117306752|emb|CAH73345.1| ribosomal protein S4 [Cyathophorum africanum] Length = 183 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P + ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKXPXLKSNL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD +++R PTI ARQ VNH+H+LVNG V+I SYRCK D Sbjct: 57 TKGSTGEVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHKHILVNGYIVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A + + +L ++ +P ++S N + +I L + + Sbjct: 117 FITIKNQRKSEAIINKNIELDQKYKIPNHLSYNSLEKKGSVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|14090490|gb|AAK53530.1| small ribosomal protein 4 [Schistomitrium robustum] Length = 183 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+ +S K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTXYQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 KGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K + V + + +++ VP +++++ +I L + M L Sbjct: 118 ISIKNRQKSQSIVAKTIEFSQKYKVPNHLTLDSLEKKGLVNQI---LNHESIGLKMNELL 174 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 175 VVEYYSR 181 >gi|15991807|gb|AAF63982.2| small ribosomal protein 4 [Pogonatum urnigerum] Length = 181 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 18 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 76 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN R VNI SYRCK D I +K + + A + + ++ Sbjct: 77 RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIITKNIDFSQ 136 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 137 KYKIPNHLTFNSLEKKGLINQI---LDRESIGLKINELLVVEYYSR 179 >gi|63100969|gb|AAY33109.1| small ribosomal protein 4 [Homaliadelphus targionianus] Length = 186 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 ARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|12330546|gb|AAG52810.1| ribosomal protein 4 [Hedwigia ciliata] Length = 186 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTPQLKSSSINQSTPNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGEVLXQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + ++ +P +++ N +I L + + Sbjct: 119 DFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLQKKGXVNQI---LDRELIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|33413167|emb|CAD86720.1| ribosomal protein small subunit 4 [Racomitrium lanuginosum] Length = 179 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 13 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 72 VIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMD 131 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 132 FSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 177 >gi|67035845|gb|AAY62849.1| small ribosomal protein subunit 4 [Aptychopsis pyrrophylla] Length = 187 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S + K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ N +I L + Sbjct: 117 KPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|162415088|gb|ABX89118.1| ribosomal protein S4 [Tortula mucronifolia] Length = 188 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I + + K + + ++ +P +++ N +I L + Sbjct: 117 CKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI---LDQESIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|37992461|gb|AAR06409.1| small ribosomal protein 4 [Chrysocladium flammeum] Length = 186 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 ARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|28194755|gb|AAO33639.1|AF480994_1 ribosomal protein S4 [Tortula inermis] Length = 189 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L QK++ +YG I+E++ + Sbjct: 1 RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISXYRIRLEEXQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SY Sbjct: 57 VRIARKAKGSTGQILLQLLEMRLDNVIFRFGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I + + K + + ++ +P +++ N +I L Sbjct: 117 RCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|293612024|gb|ADE48456.1| ribosomal protein 4 [Zamia inermis] Length = 173 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 6 NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 64 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + + A + + Sbjct: 65 NTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIDKNL 124 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 125 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 171 >gi|293612010|gb|ADE48449.1| ribosomal protein 4 [Macrozamia lucida] Length = 183 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +R+ R+ S + ++L KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I YRCK D Sbjct: 57 AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPGYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI V+ + K A + + L+++D + +++++ +I S + + Sbjct: 117 VITVRDQQKSRAMIEKNIDLSQKDQMSNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|254935441|gb|ACT88108.1| ribosomal protein S4 [Pseudopanax discolor] Length = 181 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 4 KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I + + Sbjct: 63 LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122 Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + D +P+++++ I S + + LVVE+YSR Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLRPFQYKGLVNXIIDSK---WVGLKINELLVVEYYSR 179 >gi|49182667|gb|AAT57796.1| small ribosomal protein [Aneura pinguis] Length = 191 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 9/197 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 2 KIIRRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++ Sbjct: 58 LLKYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIID 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189 I SY CK GDVI + + K + + Q + +P +++ + V + +I Sbjct: 118 IPSYNCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD--- 172 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 WIYLKINELLVVEYYSR 189 >gi|51860487|gb|AAU11380.1| ribosomal protein small subunit 4 [Ephedra distachya] gi|51860525|gb|AAU11399.1| ribosomal protein small subunit 4 [Ephedra pedunculata] gi|51860529|gb|AAU11401.1| ribosomal protein small subunit 4 [Ephedra frustillata] gi|51860543|gb|AAU11408.1| ribosomal protein small subunit 4 [Ephedra tweediana] gi|51860545|gb|AAU11409.1| ribosomal protein small subunit 4 [Ephedra chilensis] gi|51860549|gb|AAU11411.1| ribosomal protein small subunit 4 [Ephedra breana] Length = 202 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 2 GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 57 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 117 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 NKIIDTKD---LQLKIKEMLVIEYYSR 200 >gi|184127923|gb|ACC67861.1| ribosomal protein small subunit 4 [Danaea leprieurii] Length = 189 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + +K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 DLPGLTTKTLKSKESQIAMDPASKK--ISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIA 57 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R P+I AARQ VNHRH+LVN R V+I SYRCK Sbjct: 58 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRLVDIPSYRCKP 117 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ + V + + +D +PE+++ D +I + + Sbjct: 118 KDIINVRNQTNSQSLVKRSLESLNKDKIPEHLTFSLLEDDKPQGLVNKIVTRD---SIGL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 NINELLVVEYYSR 187 >gi|33413185|emb|CAD86729.1| ribosomal protein small subunit 4 [Campylopus introflexus] Length = 182 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 16 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRHVLVN VNI SYRCK D I +K + K + + + Sbjct: 75 IIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIPSYRCKPQDFITIKNRQKSQSIIARNLE 134 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLNINELLVVEYYSR 180 >gi|14090484|gb|AAK53527.1| small ribosomal protein 4 [Campylopus eberhardtii] Length = 182 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 16 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRHVLVN VNI SYRCK D I +K + K + + + + Sbjct: 75 IIFRLGMAPTIPGARQLVNHRHVLVNNXIVNIPSYRCKPQDFITIKXRQKSQSMIAKNVE 134 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LXHESIGLNINELLVVEYYSR 180 >gi|254995537|emb|CAO82726.1| ribosomal protein S4 [Lycopodium habereri] gi|254995557|emb|CAO82736.1| ribosomal protein S4 [Diphasiastrum tristachyum] Length = 168 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 2 STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 60 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + +S+ A + + ++ Sbjct: 61 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNE 120 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++++ +I + LVVE+YSR Sbjct: 121 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 166 >gi|3914852|sp|O20231|RR4_HEAMA RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292888|emb|CAA92551.1| ribosomal protein S4 [Scadoxus puniceus] Length = 182 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNPLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + A R ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNFIASAPREELPNHLTIDSFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|108861062|gb|ABG21403.1| ribosomal protein small subunit 4 [Marsilea ancylopoda] Length = 200 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSNNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|6012947|emb|CAA58944.2| ribosomal protein S4 [Polypodium vulgare] Length = 201 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+ KS + Q K S F ++L AKQ+++ Sbjct: 1 MSRYRGPRLKLIRRLKNLPGFVGKSKMPNLGEFRVATDQSSSRKISQFCVRLEAKQRLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + A ++RG T L+ LE RLD +++ T+ AARQ VNHRH Sbjct: 61 NYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDNVIFHLGLASTVPAARQLVNHRH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVA 177 +LVN V+I SYRCK D+I V+ + ++ A + P++++++ + Sbjct: 120 ILVNSCVVDIPSYRCKPKDIITVRNRPTSYNALKNKFTGATKR-PDHLTISLSKDNKPTG 178 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEF 203 I + + LVVE+ Sbjct: 179 LVNCI---ANRESVNLNINELLVVEY 201 >gi|284468549|gb|ADB90335.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 186 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|125662684|gb|ABN50292.1| small ribosomal protein 4 [Sequoia sempervirens] Length = 207 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 11/210 (5%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI R+ K+P RS P + KPS + ++L+ KQ+++ + Sbjct: 2 SRYRGPRLKIINRLKILPGLSKKTP--NRSEQPSKKKHSKPPKPSKYPVRLKEKQRLRFH 59 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A R++G T L+ LE RLD I++R +I ARQ VNHRH+ Sbjct: 60 YG-LAERQLLQYVRIAKRAKGSTGQVLLQLLEMRLDNILFRLGMALSIPEARQLVNHRHI 118 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MV 176 LVN R V+I SYRCK D I +K K + + + ++D VP ++ + Sbjct: 119 LVNDRIVDIPSYRCKPQDFISIKDKQRLRNIINKNIDNFKKDKMRVPPHLKLIKKKSQYS 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + + LVVE+YSR Sbjct: 179 GLVHKIIDNSR---IGLKINELLVVEYYSR 205 >gi|184127929|gb|ACC67864.1| ribosomal protein small subunit 4 [Danaea nodosa] Length = 190 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 DLPGLTTKTLKSKESQIAMD-PSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R P+I AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRLVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ + V + ++D +PE+++ + D +I + + Sbjct: 119 KDIINVRNQTNSHSLVKRNLESLDKDKIPEHLTLSLLEDDKPQGLVNKIVTRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 NINELLVVEYYSR 188 >gi|11121137|emb|CAC14784.1| ribosomal protein subunit 4 [Hedwigia ciliata] Length = 185 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQSTPNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI AARQ VNHRH+LVN V I SYRCK Sbjct: 58 KAKGSTGEVLLQLLEMRLDNIIFRLGMASTIPAARQLVNHRHILVNDHIVXIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + ++ +P +++ N +I L + + Sbjct: 118 DFITIKDRQKSQAIISKNIDFYQKSKIPNHLTYNSLQKKGLINQI---LDRELIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|16565357|gb|AAL26197.1|AF313590_1 small ribosomal protein 4 [Equisetum x ferrissii] Length = 196 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ +NL G V ++ Q + K S +G++L AKQ+++ YG ++E++ Sbjct: 1 IRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A ++G T L+ LE RLD I++R FVPTI +ARQ +NHRH+LVN R V++ Sbjct: 59 NYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRHILVNNRIVDVP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLK 187 S+ CK D+I + + + + + A+ VPE++++ + + Sbjct: 119 SFHCKPKDIITIGSPKTYQSILTKRIESFAKDQVPEHLTLSLSEPKKPKGFVNYLINR-- 176 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 -ESIGLKINELLVVEYYSR 194 >gi|14090468|gb|AAK53519.1| small ribosomal protein 4 [Leucobryum antillarum] Length = 182 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 16 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K + V + + Sbjct: 75 ILFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIE 134 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLKINELLVVEYYSR 180 >gi|293634067|gb|ADE60413.1| ribosomal protein subunit 4 [Polytrichadelphus innovans] Length = 182 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A R+ Sbjct: 1 LTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R +NI SYRCK D Sbjct: 57 KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIINIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + + A + +++ +P +++ N +I L + + L Sbjct: 117 ITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|63191795|gb|AAY34857.1| small ribosomal protein subunit 4 [Aloina rigida] Length = 191 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R +G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IRXLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D I + + K + + ++ P +++ N +I L Sbjct: 117 SYRCKPQDFITINDRKKSQVMITKNVDFYQKYKRPNHLTFNSLEKKGLINQI---LDQES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|67035825|gb|AAY62843.1| small ribosomal protein subunit 4 [Acanthorrhynchium papillatum] Length = 185 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 58 KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 118 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|51860515|gb|AAU11394.1| ribosomal protein small subunit 4 [Ephedra aspera] gi|51860547|gb|AAU11410.1| ribosomal protein small subunit 4 [Ephedra multiflora] gi|51860551|gb|AAU11412.1| ribosomal protein small subunit 4 [Ephedra boelkei] gi|51860557|gb|AAU11415.1| ribosomal protein small subunit 4 [Ephedra fragilis] Length = 202 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 2 GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 57 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 117 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 NKIIDTKD---LQLKIKEMLVIEYYSR 200 >gi|3098218|gb|AAC15557.1| small ribosomal protein 4 [Ulota phyllantha] Length = 188 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 7/190 (3%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 3 SLPGLTNKTPQLKSSSVNQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 59 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD +++R PTI ARQ VNH+H++VN R V+I SYRCK Sbjct: 60 RKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNXRIVDIPSYRCKP 119 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I ++ + K + + ++ +P +++ N +I L + + Sbjct: 120 QDFITIRNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIGLKIN 176 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 177 ELLVVEYYSR 186 >gi|289599927|gb|ADD12914.1| ribosomal protein S4 [Hibbertia hypericoides] Length = 167 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A + +G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKVKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SSPHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 165 >gi|29422395|gb|AAO84593.1| small ribosomal protein 4 [Philonotis scabrifolia] Length = 199 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 8/203 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+ K+P S + K S + ++L KQK++ +YG Sbjct: 1 YRGLRVRIIRRLXAFPGLTNKTPQLESSS---IXQSTSNKKISQYRIRLEEKQKLRCHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ LE RLD +++R TI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAXTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N R V+I SYRCK D I +K + K A + + ++ +P++++ N +I Sbjct: 117 NBRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPBHLTYNSLENKGLVNQI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYS 205 L + M LVV +YS Sbjct: 177 ---LDRESIGLKMNXLLVVXYYS 196 >gi|162415132|gb|ABX89140.1| ribosomal protein S4 [Didymodon rufidulus] Length = 188 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLSNKIPHLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I + + K + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|124021094|gb|ABM88820.1| small ribosomal protein subunit 4 [Aneura pinguis] Length = 192 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 2 IRRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I Sbjct: 58 KYVFTARGAKGSTGQFLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHVSINEHIIDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I + + K + + L + ++P +++ + + + +I Sbjct: 118 SYNCKPGDIITINNREKCRLVNWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 174 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 IYLKINELLVVEYYSR 190 >gi|74273131|gb|ABA01265.1| ribosomal protein S4 [Passiflora punctata] Length = 183 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRTNLPTHLILSPEKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INEFLVIEYYSR 181 >gi|293633993|gb|ADE60376.1| ribosomal protein subunit 4 [Notoligotrichum australe] Length = 181 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 18 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 76 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ V H+H+LVN R VNI SYRCK D I +K + + A + + ++ Sbjct: 77 RLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQ 136 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 137 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 179 >gi|74273203|gb|ABA01301.1| ribosomal protein S4 [Passiflora cuprea] Length = 183 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R S+ S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPIVGSAF-------SRSSRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|293634065|gb|ADE60412.1| ribosomal protein subunit 4 [Polytrichadelphus giganteus] Length = 178 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 15 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 73 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + + A ++ ++ Sbjct: 74 RLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKPQDFITIKDRQESQAIIIRNIDFSQ 133 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 134 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 176 >gi|284468537|gb|ADB90329.1| ribosomal protein subunit 4 [Scleropodium cespitans] gi|284468541|gb|ADB90331.1| ribosomal protein subunit 4 [Scleropodium cespitans] Length = 185 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 58 KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 118 DFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|255116220|gb|ACU01162.1| small ribosomal protein subunit 4 [Acroporium secundum] Length = 185 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 58 KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L+ + + Sbjct: 118 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LERESIGLKINE 174 Query: 198 NLVVEFYSR 206 L+VE+YSR Sbjct: 175 LLIVEYYSR 183 >gi|89112933|gb|ABD61085.1| ribosomal protein subunit 4 [Codriophorus carinatus] Length = 172 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R TI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|323652540|gb|ADX98521.1| ribosomal protein S4 [Cinnamodendron ekmanii] Length = 186 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 10/191 (5%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTRK---RPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAG 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISV--NHDNMVATFVRIPSSLKDVPYPVIM 195 D+I K + + A + + + ++ +++S+ + +I S + + Sbjct: 117 DIITTKDEQRSRALIQNSIDSSPHEELAKHLSLYSSQSQYKGVVNQIIDSK---WIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|255116224|gb|ACU01164.1| small ribosomal protein subunit 4 [Meteoriella soluta] Length = 186 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 ARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNKI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|46486582|gb|AAS98727.1| ribosomal protein subunit 4 [Hypnodendron arcuatum] Length = 185 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 58 KTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + ++ +P +++ + +I L + + Sbjct: 118 DFITIKDRPKSQAIISKNIDFYQKYKIPNHLTYSSLEKKGFINQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|293612018|gb|ADE48453.1| ribosomal protein 4 [Zamia acuminata] Length = 183 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K P Q K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 PGLTNKRP----KSINDPTNQSSYRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAG 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 56 RAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPR 115 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 DVI V+ + + A + + L+++D +P +++++ +I S + + Sbjct: 116 DVITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINE 172 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 173 LLVVEYYSR 181 >gi|51860479|gb|AAU11376.1| ribosomal protein small subunit 4 [Ephedra laristanica] gi|51860483|gb|AAU11378.1| ribosomal protein small subunit 4 [Ephedra aphylla] gi|51860485|gb|AAU11379.1| ribosomal protein small subunit 4 [Ephedra fragilis] gi|51860489|gb|AAU11381.1| ribosomal protein small subunit 4 [Ephedra fedtschenkoae] gi|51860495|gb|AAU11384.1| ribosomal protein small subunit 4 [Ephedra saxatilis] gi|51860499|gb|AAU11386.1| ribosomal protein small subunit 4 [Ephedra sinica var. pumila] gi|51860505|gb|AAU11389.1| ribosomal protein small subunit 4 [Ephedra transitoria] gi|51860511|gb|AAU11392.1| ribosomal protein small subunit 4 [Ephedra torreyana var. powelliorum] gi|51860533|gb|AAU11403.1| ribosomal protein small subunit 4 [Ephedra americana] gi|51860535|gb|AAU11404.1| ribosomal protein small subunit 4 [Ephedra gracilis] gi|51860553|gb|AAU11413.1| ribosomal protein small subunit 4 [Ephedra compacta] gi|51860555|gb|AAU11414.1| ribosomal protein small subunit 4 [Ephedra fragilis] gi|51860561|gb|AAU11417.1| ribosomal protein small subunit 4 [Ephedra foeminea] gi|51860571|gb|AAU11422.1| ribosomal protein small subunit 4 [Ephedra przewalskii] gi|51860573|gb|AAU11423.1| ribosomal protein small subunit 4 [Ephedra przewalskii] gi|51860577|gb|AAU11425.1| ribosomal protein small subunit 4 [Ephedra sinica] gi|51860583|gb|AAU11428.1| ribosomal protein small subunit 4 [Ephedra major subsp. procera] gi|51860585|gb|AAU11429.1| ribosomal protein small subunit 4 [Ephedra saxatilis var. sikkimensis] gi|51860587|gb|AAU11430.1| ribosomal protein small subunit 4 [Ephedra saxatilis] gi|51860589|gb|AAU11431.1| ribosomal protein small subunit 4 [Ephedra sp.] Length = 201 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 1 GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 NKIIDTKD---LQLKIKEMLVIEYYSR 199 >gi|111283696|gb|ABH09198.1| small ribosomal protein 4 [Herzogianthus vaginatus] Length = 186 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 8/193 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + +I RR+G K+ Y + K S + ++L KQK++ +YG + Sbjct: 1 GPRVRIIRRLGALPGLTGKTLKPKSGY---IDRSTSNKKVSQYRVRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++R PTI ARQ VNH H+++N Sbjct: 57 TERQLLKYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHGHIVINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GDVI ++ K K + + L + + +++++ + + + Sbjct: 117 DIVDIPSYNCEAGDVITIRNKQKSQSIITRNINLFRKLKISNHLTLDSTQLRGSVNQ--- 173 Query: 185 SLKDVPYPVIMQP 197 + + + Sbjct: 174 RIHREWISLKINE 186 >gi|37992711|gb|AAR06534.1| small ribosomal protein 4 [Trachypodopsis formosana] Length = 186 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 8/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K+P S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYVRI 56 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 ARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 PQDFISIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|51860469|gb|AAU11371.1| ribosomal protein small subunit 4 [Gnetum leyboldii] Length = 200 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P + G+ R K S L+ KQK++ ++G + Sbjct: 3 PRFKIIRRLNTLPGLTSKQPKYKK----GVRQSSRPWWKKSQHLACLQEKQKIRFHFG-L 57 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R + A + +G T L+ LE RLD I+Y+ TI AARQ VNHRH+LVN Sbjct: 58 TERQLRQYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLTGTIPAARQLVNHRHILVND 117 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182 VNI SYRCK DVI +K K+ + ++ E +P +++++ +I Sbjct: 118 HVVNIPSYRCKPQDVITIKGKNPDQLKTIITRNRNKTRENKIPYHLTLDLSQKKGIVNKI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 178 IDRKD---IQLNIKEMLVIEYYSR 198 >gi|63191716|gb|AAY34818.1| small ribosomal protein subunit 4 [Trachycystis microphylla] Length = 182 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K + + Sbjct: 72 LDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQTIISK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N N +I L + + LVVE+YSR Sbjct: 132 NIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESIDLKINELLVVEYYSR 180 >gi|51860521|gb|AAU11397.1| ribosomal protein small subunit 4 [Ephedra californica] Length = 201 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 1 GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 HHIVDIPSYRCKPQDIITLKGKDPERLKIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 NKIIDTKD---LQLKIKEMLVIEYYSR 199 >gi|77019157|emb|CAH60184.1| chloroplast 30S ribosomal protein S4 [Grimmia ramondii] Length = 182 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K + +++ ++ +P +++ N +I L + + L Sbjct: 117 ITIKDRQKSKSMIIKNMDFYQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|222103436|gb|ACM44247.1| small ribosomal protein subunit 4 [Polytrichum juniperinum] Length = 180 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 17 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 75 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN R VNI SYRCK D I +K + + A + ++ Sbjct: 76 RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 135 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 136 NYKIPNHLTFNSLEKKGLVNQI---LDRESINLKINELLVVEYYSR 178 >gi|328541136|gb|AEB21792.1| ribosomal protein S4 [Telaranea meridiana] Length = 177 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 13/186 (6%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 +PK N RS S + ++L KQK++ +YG ++E++ + A +++ Sbjct: 1 KPKXXYNDRS--------TSNKXVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAK 51 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 G T L+ LE RLD + R TI ARQ VNHRH+ +N V+I SY C+ GDVI Sbjct: 52 GSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINNNIVDIPSYNCESGDVI 111 Query: 142 EVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 +K K K + + + L + +P +++ + + + + + + + LV Sbjct: 112 TIKDKQKSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR---EWINLKINELLV 168 Query: 201 VEFYSR 206 VE+YSR Sbjct: 169 VEYYSR 174 >gi|77019141|emb|CAH60271.1| chloroplast 30S ribosomal protein S4 [Grimmia mollis] Length = 177 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 8 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 67 LDNIIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 126 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 127 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 175 >gi|3914855|sp|O20236|RR4_ISOTA RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292913|emb|CAA92541.1| ribosomal protein S4 [Isophysis tasmanica] Length = 182 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|293634009|gb|ADE60384.1| ribosomal protein subunit 4 [Oligotrichum afrolaevigatum] Length = 176 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 13 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 71 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN R VNI SYRCK D I +K + + A + ++ Sbjct: 72 RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 131 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 132 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 174 >gi|62766396|gb|AAX99325.1| rpS4 [Helminthostachys zeylanica] Length = 191 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 12/196 (6%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + K+P + + Q K S + ++L AKQK++ +G ++E++ Sbjct: 2 LGNSPGLTNKTPKSKKI----GSDQSISRKISQYCIRLEAKQKLRFNHG-LTERQLLKYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R+ G T + LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 RTARRASGSTGQVSLQLLEMRLDNIIFRLGISPTIPGARQLVNHRHILVNDRIVDIPSYH 116 Query: 135 CKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVP 190 CK DVI V+ ++ + + AE +P ++S+ D + R+ Sbjct: 117 CKANDVITVRDQNNSRNLIGKDVGSSAEGRIPNHLSLSLSEDDKLKGFVNRMIDR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 174 IGLKVNELLIVEYYSR 189 >gi|46811054|gb|AAT01845.1| small ribosomal protein 4 [Sphaerocarpos texanus] Length = 179 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 7/183 (3%) Query: 25 SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 + T+S +K S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 1 KTLKTKSGYINQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGST 57 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L+ LE RLD I++R PTI ARQ VNHRH+L+N +V+I SY CK DVI +K Sbjct: 58 GQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNTVDIPSYSCKPKDVITIK 117 Query: 145 QKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 + K + + + ++ +P ++S + +I + + LVVE+ Sbjct: 118 DRQKSQSIITKNINSFQKPKIPNHLSFDLIQFKGVVNQIIDR---ESIYLKINELLVVEY 174 Query: 204 YSR 206 YSR Sbjct: 175 YSR 177 >gi|89112943|gb|ABD61090.1| ribosomal protein subunit 4 [Grimmia cribrosa] gi|89112955|gb|ABD61096.1| ribosomal protein subunit 4 [Grimmia ungeri] Length = 172 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|12545452|ref|NP_075002.1| ribosomal protein S4 [Euglena longa] gi|14285747|sp|P58134|RR4_ASTLO RecName: Full=Plastid 30S ribosomal protein S4 gi|12329916|emb|CAC24613.1| ribosomal protein S4 [Euglena longa] Length = 206 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 6/208 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K+ R++G K K S + ++L+ KQK++ Sbjct: 1 MVRYLGPHVKVIRKLGSLRAFTKKKIKRYFKLDTKKRKLSFNKKTSKYKIRLKEKQKLRF 60 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 + ISEK+ + K+A + +G + NL+ LE RLD IVYR PTI ++RQ +NH H Sbjct: 61 NFA-ISEKQLFNYVKKAIKLKGSSGENLLVALEMRLDNIVYRLGLAPTIISSRQLINHGH 119 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVAT 178 + V+G+ VNI S++CK + I++K + + +L ++ P ++ N + A Sbjct: 120 IYVDGKVVNIPSFKCKPTNNIKIKDNLVSKRIIEKNIELLDKYFRAPSHLYFNKKKLEAK 179 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +I+ L++EFYSR Sbjct: 180 VINMVKR---EDIKLIINELLIIEFYSR 204 >gi|108861068|gb|ABG21406.1| ribosomal protein small subunit 4 [Marsilea capensis] Length = 200 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K+P S Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKILRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|33413173|emb|CAD86722.1| ribosomal protein small subunit 4 [Schistidium papillosum] Length = 182 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 72 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 132 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 180 >gi|293634013|gb|ADE60386.1| ribosomal protein subunit 4 [Oligotrichum canaliculatum] Length = 180 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 17 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 75 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN R VNI SYRCK D I +K + + A + ++ Sbjct: 76 RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 135 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 136 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|108861060|gb|ABG21402.1| ribosomal protein small subunit 4 [Marsilea aegyptiaca] gi|108861066|gb|ABG21405.1| ribosomal protein small subunit 4 [Marsilea botryocarpa] gi|108861076|gb|ABG21410.1| ribosomal protein small subunit 4 [Marsilea distorta] gi|108861086|gb|ABG21415.1| ribosomal protein small subunit 4 [Marsilea macrocarpa] gi|108861088|gb|ABG21416.1| ribosomal protein small subunit 4 [Marsilea macropoda] gi|108861096|gb|ABG21420.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|108861106|gb|ABG21425.1| ribosomal protein small subunit 4 [Marsilea nubica var. gymnocarpa] gi|108861116|gb|ABG21430.1| ribosomal protein small subunit 4 [Marsilea vera] Length = 200 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|293611988|gb|ADE48438.1| ribosomal protein 4 [Dioon rzedowskii] Length = 174 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 7 NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 65 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + + A + + Sbjct: 66 NTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIEKNL 125 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 126 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 172 >gi|125662688|gb|ABN50294.1| small ribosomal protein 4 [Cedrus atlantica] Length = 185 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 9/191 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P Y + K S + ++ KQK++ +YG ++E++ + Sbjct: 1 ALPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKYVRI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A R++G T L+ LE RLD I++R PTI ARQ VNH H+ VN V+I SY CK Sbjct: 56 ARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSYPCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 DVI ++ + + + + + L +RD +P +++ N +I S + + Sbjct: 116 PQDVITIRDQQRLRSIIKKNIDLFQRDKLPNHLTFNSLQYKGFINQIIDSK---WISLKI 172 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 173 NELLVVEYYSR 183 >gi|184127957|gb|ACC67878.1| ribosomal protein small subunit 4 [Marattia salicina] Length = 190 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + K K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 DLPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ V + + +D +PE+++ + + RI + + Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 NINELLVVEYYSR 188 >gi|108861108|gb|ABG21426.1| ribosomal protein small subunit 4 [Marsilea oligospora] Length = 200 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I ++ + + + R ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|89112935|gb|ABD61086.1| ribosomal protein subunit 4 [Schistidium apocarpum] gi|89112937|gb|ABD61087.1| ribosomal protein subunit 4 [Schistidium trichodon] Length = 172 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|52788789|gb|AAU87375.1| ribosomal protein small subunit 4 [Calochlaena villosa] gi|99639944|emb|CAJ45115.1| putative ribosomal protein S4 gene [Calochlaena villosa] Length = 200 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+ + RK S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKNLPGLTGKASNPRETRVTTDQSASRK--ISQFCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE RLD I++ + TI AARQ VNHRH++VN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRI 182 V++ SYRCK D+I ++ + + + R D+P++++ + RI Sbjct: 118 VDVPSYRCKPKDIITIRNRPTSYNGLKSGINESSRGGDIPDHLTFSLLEGNRPKGLVNRI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198 >gi|77019211|emb|CAH60210.1| chloroplast 30S ribosomal protein S4 [Grimmia unicolor] Length = 176 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 7 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 66 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAIIIK 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 126 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 174 >gi|89112945|gb|ABD61091.1| ribosomal protein subunit 4 [Grimmia plagiopodia] Length = 172 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDQESIGLKINELLVVEYYSR 170 >gi|17154617|emb|CAC83921.1| ribosomal protein S4 [Orthrosanthus chimboracensis] Length = 182 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIENSIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|3914856|sp|O20254|RR4_LIBFO RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292919|emb|CAA92543.1| ribosomal protein S4 [Libertia formosa] Length = 182 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|52783270|sp|Q6H9K5|RR4_EQUSC RecName: Full=30S ribosomal protein S4, chloroplastic gi|48927213|emb|CAE47542.1| small ribosomal protein 4 [Equisetum scirpoides] Length = 207 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I R NL G V ++ Q + K S + ++L AKQ+++ Sbjct: 1 MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYCIRLEAKQRLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ++E++ + + A ++G T L+ LE RLD I++R VPTI +ARQ +NHRH Sbjct: 60 NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176 +LVN R V++ S+ CK D+I + + + + + A+ VPE++++ Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRIESFAKDQVPEHLTLSLSEPKKPK 178 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 179 GLVNYLINR---ESIGLTINELLVVEYYSR 205 >gi|37683560|gb|AAQ98831.1| small ribosomal protein 4 [Pogonatum procerum] Length = 173 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L+ KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 10 NKKISQYRIRLKEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 68 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + + A + + ++ Sbjct: 69 RLGMAPTIPGARQLVNHKHILVNDDIVNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQ 128 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ + +I L + + LVVE+YSR Sbjct: 129 KYKIPNHLTFSSLEKKGLVNQI---LDRESIDLKINELLVVEYYSR 171 >gi|33413165|emb|CAD86719.1| ribosomal protein small subunit 4 [Grimmia mollis] Length = 176 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 7 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 66 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 126 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 174 >gi|12330486|gb|AAG52780.1| ribosomal protein 4 [Voitia hyperborea] Length = 188 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 8/190 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S + K S + ++L KQK++ +YG I+E++ + + Sbjct: 2 GALPGLTNKTPQLKSSST---NQSXANKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 57 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++R PTI ARQ +NHRH+LVN R V+I SYRC Sbjct: 58 TARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVDIPSYRC 117 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A + + + + +P +++ N +I L + Sbjct: 118 KPQDFITIKDRQKSQAIISKNIEFFXKYKIPNHLTYNFLKKQGLVNQI---LDCESIGLK 174 Query: 195 MQPNLVVEFY 204 + LVVE+Y Sbjct: 175 INELLVVEYY 184 >gi|162415074|gb|ABX89111.1| ribosomal protein S4 [Syntrichia caninervis var. spuria] gi|162415100|gb|ABX89124.1| ribosomal protein S4 [Didymodon fallax] gi|162415110|gb|ABX89129.1| ribosomal protein S4 [Barbula coreensis] Length = 186 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 25 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 83 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN VNI SYRCK D I + + K + + +++ Sbjct: 84 GMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 143 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 144 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 184 >gi|47606948|gb|AAT36394.1| ribosomal protein subunit 4 [Schistostega pennata] Length = 185 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G RS K S + ++L KQK++ +YG +E++ + + A + Sbjct: 2 PGLTNKIPQLRSNSINQ--STSNKKISQYRIRLEEKQKLRXHYGX-TERQLLNYVRXARK 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R VNI SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K K A +++ + + VP +++ N +I L + + Sbjct: 119 FITIKDXQKSHAMIMKNVDFSRKAKVPNHLTFNSLEKNGLVNQI---LDQESIGLKINEL 175 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 176 LVVEYYSR 183 >gi|293611982|gb|ADE48435.1| ribosomal protein 4 [Dioon edule] gi|293611984|gb|ADE48436.1| ribosomal protein 4 [Dioon mejiae] Length = 181 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P +R+ R+ S + ++L KQK++ +YG ++E++ + A R+ Sbjct: 1 LTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE R D ++R+ PTI ARQ VNHRH+LVN R V+I SYRCK DV Sbjct: 56 KGSTGQVLLQLLEMRSDNTIFRSGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 115 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I V+ + + A + + L+++D +P +++++ +I S + + L Sbjct: 116 ITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELL 172 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 173 VVEYYSR 179 >gi|289599868|gb|ADD12885.1| ribosomal protein S4 [Davilla cf. kunthii Zartman s.n.] Length = 166 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I Sbjct: 1 SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNI 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVN R VNI SYRCK D+I VK + K A + Sbjct: 60 LFRLGMASTIPGARQLVNHRHILVNDRIVNIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 164 >gi|289599921|gb|ADD12911.1| ribosomal protein S4 [Hibbertia goyderi] Length = 165 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNH+H+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 60 FRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNFLDSS 119 Query: 161 -ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ +I S + + LVVE+YSR Sbjct: 120 LHDEFPKHLTLQPFQYKGLVNQIIDSK---WIGLQINELLVVEYYSR 163 >gi|89112941|gb|ABD61089.1| ribosomal protein subunit 4 [Grimmia calyptrata] gi|89112949|gb|ABD61093.1| ribosomal protein subunit 4 [Grimmia ovalis] gi|89112951|gb|ABD61094.1| ribosomal protein subunit 4 [Grimmia anodon] Length = 172 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|125662730|gb|ABN50315.1| small ribosomal protein 4 [Ephedra torreyana] Length = 203 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 14/209 (6%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62 KI RR+ K P + +H R K S + + L+ KQK++ +Y Sbjct: 1 YRGPLFKIIRRLKTLPGLTSKRPKYKKR----VHRSFRPWWKKSQYLVCLQEKQKIRFHY 56 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G + E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+L Sbjct: 57 G-LPERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177 VN V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201 >gi|3098176|gb|AAC15536.1| small ribosomal protein 4 [Cinclidium stygium] Length = 187 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I Sbjct: 17 TSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNI 75 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVN R V+I SYRCK D I +K + K + + L Sbjct: 76 IFRLGMASTIPGARQLVNHRHILVNDRLVDIPSYRCKPQDFITIKDRQKSQTIISKNIDL 135 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N N +I L + + LVVE+YSR Sbjct: 136 YQKSKIPNHLTYNSLNKKGLVNQI---LDRESIDLKINELLVVEYYSR 180 >gi|293611966|gb|ADE48427.1| ribosomal protein 4 [Cycas clivicola] gi|293611968|gb|ADE48428.1| ribosomal protein 4 [Cycas guizhouensis] gi|293611970|gb|ADE48429.1| ribosomal protein 4 [Cycas hainanensis] gi|293611974|gb|ADE48431.1| ribosomal protein 4 [Cycas panzhihuaensis] gi|293611976|gb|ADE48432.1| ribosomal protein 4 [Cycas siamensis] Length = 183 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +R+ R+ S + ++ KQK++ +YG ++E++ + A R Sbjct: 1 PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 57 AKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI ++ + + A + + L+++D +P +++++ +I S + + Sbjct: 117 VITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK---WISLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|33413241|emb|CAD86755.1| ribosomal protein small subunit 4 [Pleurochaete squarrosa] Length = 183 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 22 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 80 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYR K D I +K + K + + +++ Sbjct: 81 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRFKPQDFITIKDRQKSQVMITKNVDFSQKS 140 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 141 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 181 >gi|14090502|gb|AAK53536.1| small ribosomal protein 4 [Dicranodontium pulchroalare] Length = 183 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+ +S K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTXSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 KGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K V + + +++ VP +++ N +I L + + L Sbjct: 118 ITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI---LNKESIGLKINELL 174 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 175 VVEYYSR 181 >gi|289599951|gb|ADD12926.1| ribosomal protein S4 [Tetracera masuiana] Length = 166 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I Sbjct: 1 SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNI 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 LFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 164 >gi|162415078|gb|ABX89113.1| ribosomal protein S4 [Syntrichia bidentata] Length = 186 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 25 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 83 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN VNI SYRCK D I + + K + + +++ Sbjct: 84 GMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 143 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 144 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 184 >gi|37683570|gb|AAQ98836.1| small ribosomal protein 4 [Pogonatum neocaledonicum] Length = 185 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S +K + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKTSQLKSGYINQTVSNKKISQN--RIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R TI ARQ VNH+H+LVNG VNI SYRCK Sbjct: 58 KAKGSTGQILLQLLEMRLDNIIFRLGMALTIPEARQLVNHKHILVNGHIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + + + +++ +P +++ + +I L + + Sbjct: 118 DFITIKNRQESQNLIAKNIDFSQKYKIPNHLTFKSLDKKGLINQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|7576755|gb|AAF63974.1| small ribosomal protein 4 [Bartramiopsis lescurii] Length = 182 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + A ++G T L+ LE RLD I++ Sbjct: 19 NKKISQYRIRLEKKQKLRFHYG-ITERQLLKYVRIARGAKGSTGXILLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN R VNI SYRCK D I +K + K A + + ++ + Sbjct: 78 RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDQQKSQAIIAKNNEFSH 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++++N +I L + + LVVE+YSR Sbjct: 138 KYKIPNHLTLNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 180 >gi|89112957|gb|ABD61097.1| ribosomal protein subunit 4 [Grimmia incurva] gi|89112963|gb|ABD61100.1| ribosomal protein subunit 4 [Grimmia funalis] Length = 172 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|162415120|gb|ABX89134.1| ribosomal protein S4 [Didymodon johansenii] Length = 188 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYR Sbjct: 57 RVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNGIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I + + K + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|108861064|gb|ABG21404.1| ribosomal protein small subunit 4 [Marsilea angustifolia] gi|108861078|gb|ABG21411.1| ribosomal protein small subunit 4 [Marsilea drummondii] Length = 200 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|77019189|emb|CAH60200.1| chloroplast 30S ribosomal protein S4 [Grimmia muehlenbeckii] Length = 174 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 5 INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 63 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + +++ Sbjct: 64 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSKSIIIK 123 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 124 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 172 >gi|89112965|gb|ABD61101.1| ribosomal protein subunit 4 [Crossidium davidai] Length = 172 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 6 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I + + K + + Sbjct: 65 VIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMITKNVD 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N +I L + + LVVE+YSR Sbjct: 125 FYQKSKIPNHLTFNSLEKKGLINQI---LDQESIGLNINELLVVEYYSR 170 >gi|74273169|gb|ABA01284.1| ribosomal protein S4 [Passiflora tulae] Length = 183 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GAFPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ + ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPQNNLPTHLILYPKKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|3914839|sp|O19990|RR4_BELCH RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292742|emb|CAA92533.1| ribosomal protein S4 [Belamcanda chinensis] Length = 182 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 56 RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + L+ ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIALSPHEELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|74273167|gb|ABA01283.1| ribosomal protein S4 [Passiflora murucuja] Length = 183 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRLGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|289599858|gb|ADD12880.1| ribosomal protein S4 [Davilla elliptica] Length = 165 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R VNI SYRCK D+I VK + K A + + Sbjct: 60 FRLGMASTIPGARQLVNHRHILVNDRIVNIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119 Query: 161 -ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PDEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 163 >gi|74273127|gb|ABA01263.1| ribosomal protein S4 [Passiflora ornithoura] Length = 183 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ + +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRKKLPTHLILYPQKYKGLVTQIIDSK---WVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|3914859|sp|O20265|RR4_NERBO RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292972|emb|CAA92550.1| ribosomal protein S4 [Nerine bowdenii] Length = 182 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLQNPLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNFIASSPHEELPNHLTIDSFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|293612002|gb|ADE48445.1| ribosomal protein 4 [Encephalartos umbeluziensis] Length = 171 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 4 NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 62 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + K A + + Sbjct: 63 NTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNI 122 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 123 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 169 >gi|59803305|gb|AAX07761.1| Rps4 [Moerckia flotoviana] Length = 184 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K + + ++L KQK++ +YG ++E++ + A R++G T L+ LE RLD Sbjct: 18 STAXRKITXYRIRLEEKQKLRFHYG-LTERQLLKYVRIARRAKGSTGQILLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+R PTI ARQ VNHRH+++N +V+I SY CK DVI ++ + + + + Sbjct: 77 IVFRLGMAPTIPGARQLVNHRHIVINDGTVDIPSYSCKPRDVITIRDRKESRSIIARNMD 136 Query: 159 LAERDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +R V P +++++ + + ++ + + L+VE+YSR Sbjct: 137 IYQRRVIPNHLTLDSTHFRGSINQVIDR---EWIDLEINELLIVEYYSR 182 >gi|46810990|gb|AAT01813.1| small ribosomal protein 4 [Austrofossombronia australis] Length = 181 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++ Sbjct: 18 NKKMSQYRIRLEEKQKLRFHYG-LTERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIF 76 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LV+ +VNI SY CK GDVI V+ + K + + ++ L + Sbjct: 77 RLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPGDVITVRNRQKSQSIIAKSIILFQ 136 Query: 162 RDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P +++++ + + + + + LVVE+YSR Sbjct: 137 KPKAPNHLTLDSTRLRGSINQTIDRD---WINLKINELLVVEYYSR 179 >gi|77019169|emb|CAH60190.1| chloroplast 30S ribosomal protein S4 [Grimmia funalis] Length = 180 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 70 LDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 130 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 178 >gi|255116228|gb|ACU01166.1| small ribosomal protein subunit 4 [Pterobryopsis orientalis] Length = 187 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 3 LPGLTNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY+CK Sbjct: 60 KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYQCKPQ 119 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K K K + + + ++ +P +++ + +I L + + Sbjct: 120 DFITIKNKRKSETIISKNIEFDQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|157689580|gb|ABV65346.1| ribosomal protein S4 [Urtica urens] Length = 182 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 9/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P G Q R K S + ++L KQK++ +YG ++E++ A + Sbjct: 1 GLTTKKP----RTGNDFRNQLRPGKKSQYRIRLEEKQKLRFHYG-LTEQQLLKYVHIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I SYRCK D Sbjct: 56 AKGSTGQVLLQLLEMRLDNILFRLGLTSTIPQARQLVNHRHILVNGGIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I V+ K K + V + + R ++P+++++ + I L + + Sbjct: 116 IIIVRDKQKSKSLVQKYIDSSSREELPKHLTLYPFQYKGSVNEI---LDSKWVGLKINEL 172 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 173 LVVEYYSR 180 >gi|14090428|gb|AAK53499.1| small ribosomal protein 4 [Syrrhopodon gardneri] Length = 182 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + P +++ N +I L + + LVVE+YSR Sbjct: 132 NTNFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|74273139|gb|ABA01269.1| ribosomal protein S4 [Passiflora talamancensis] Length = 183 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|293611972|gb|ADE48430.1| ribosomal protein 4 [Cycas micronesica] Length = 182 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G +R+ R+ S + ++ KQK++ +YG ++E++ + A R+ Sbjct: 1 GLTNKRPKSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGRA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK DV Sbjct: 57 KGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 116 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I ++ + + A + + L+++D +P +++++ +I + + L Sbjct: 117 ITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDRK---WISLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|14090488|gb|AAK53529.1| small ribosomal protein 4 [Syrrhopodon incompletus] Length = 182 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A +++G T L+ LE R Sbjct: 13 INQPTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKAKGSTGQILLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P +++ N +I L + + LVVE+YSR Sbjct: 132 NVNFSPKYKIPSHLTFNSVEKKGLVNQI---LDHESIGLKINELLVVEYYSR 180 >gi|293611956|gb|ADE48422.1| ribosomal protein 4 [Bowenia serrulata] Length = 181 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P +R+ R+ S + ++L KQK++ +YG ++E++ + A R+ Sbjct: 1 LTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLQYVRIAGRA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE R D ++R TI ARQ VNHRH+LVN R V+I SYRCK DV Sbjct: 56 KGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 115 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I V+ + + A + + L+++D +P +++++ +I S + + L Sbjct: 116 ITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELL 172 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 173 VVEYYSR 179 >gi|289523341|ref|ZP_06440195.1| ribosomal protein S4 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503033|gb|EFD24197.1| ribosomal protein S4 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 140 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 4/143 (2%) Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++F F++A R G HN + LE R+D++VYR + ARQ V H H+ VN Sbjct: 1 MTERQFERFFEKASRMAGQKGHNFLQLLERRVDSVVYRLGIASSRAQARQLVTHGHITVN 60 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIP 183 G+ ++I S K GDVI V S+ + ++ E ++A R +PE++ +N + M V +P Sbjct: 61 GKKLDIPSALVKVGDVIAVAPNSRDIPTIRENLEVASARAIPEWLELNAERMEGRVVSLP 120 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + V + L+VE+Y+R Sbjct: 121 TREQ---IDVPVNEQLIVEYYAR 140 >gi|162415096|gb|ABX89122.1| ribosomal protein S4 [Barbula indica] Length = 189 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 2 FRTLPGLSNKTPHLKSSS---PNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 58 RIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + +++ +P +++ N +I L + Sbjct: 118 CKPQDFITIKDRQKSQVMITKNLDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESLGL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|66990656|emb|CAI29106.1| small ribosomal protein 4 [Plagiochila sp. Solga & Fischer s.n.] Length = 181 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 5/183 (2%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI RR+G K+ + SY + K S + ++L KQK++ +YG Sbjct: 1 RGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISIN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD + K K A V + ++ +P +++ + + + ++ Sbjct: 117 NDIVDIPSYTCEPGDNNTIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMI 176 Query: 184 SSL 186 + Sbjct: 177 NRE 179 >gi|16565380|gb|AAL26205.1|AF313604_1 small ribosomal protein 4 [Marattia werneri] Length = 193 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 NL G + ++ + K K S ++L AKQ+++ YG ++E++ + A Sbjct: 4 NLPGLTNKTLKSKKAQIAIDQPASK-KISQXCIRLEAKQRLRFNYG-LTERQLLKYVRIA 61 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 62 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 121 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ V + + +D +PE+++++ + RI + + Sbjct: 122 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 178 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 179 NINELLVVEYYSR 191 >gi|63191847|gb|AAY34883.1| small ribosomal protein subunit 4 [Gymnostomum aeruginosum] Length = 191 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 30 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 88 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + + +++ Sbjct: 89 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKY 148 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 149 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 189 >gi|329907623|ref|ZP_08274693.1| SSU ribosomal protein S4p (S9e) [Oxalobacteraceae bacterium IMCC9480] gi|327546928|gb|EGF31837.1| SSU ribosomal protein S4p (S9e) [Oxalobacteraceae bacterium IMCC9480] Length = 139 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 4/141 (2%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++FR F EADR +G+T L+ LE RLD ++YR F T ARQ V+H+ VNG Sbjct: 2 ERQFRRYFAEADRRKGNTGETLLKLLEGRLDNVIYRMGFGSTRAEARQLVSHKAFTVNGI 61 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 VNI SY+ K GDVI V++K+K+ ++EA LAE+ +P +++V+ M TF +P Sbjct: 62 VVNIASYQVKAGDVIVVREKAKKQVRIVEALSLAEQIGMPSWVAVDAKKMEGTFKSVPDR 121 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + +L+VE YSR Sbjct: 122 SE---IAHDVNESLIVELYSR 139 >gi|293611996|gb|ADE48442.1| ribosomal protein 4 [Encephalartos gratus] Length = 172 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 5 NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 63 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + K A + + Sbjct: 64 NTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNI 123 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 124 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 170 >gi|162415136|gb|ABX89142.1| ribosomal protein S4 [Didymodon rivicola] Length = 188 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 57 RVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I + + K + + +++ +P +++ N +I L + Sbjct: 117 CKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQKSIGL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|157689488|gb|ABV65300.1| ribosomal protein S4 [Hirtella bicornis] Length = 172 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 L Q R K S + ++L KQK++ +YG ++E++ A +++G T L+ +E R Sbjct: 3 LRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVCIAAKAKGSTGQVLLQLIEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I VK + K A + Sbjct: 62 LDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRCKPRDIITVKDEQKSRAMIQN 121 Query: 156 AS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A+ ++P++++ +I S + + L VE+YSR Sbjct: 122 HLDSSAQEELPKHLTFQPFQHKGLVNQIIDSK---WIGLKINELLXVEYYSR 170 >gi|67035578|gb|AAY62720.1| small ribosomal protein subunit 4 [Glyphomitrium daviesii] Length = 153 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 5/155 (3%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++R PTI A Sbjct: 1 EEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGA 59 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171 RQ VNH+H+LVN VNI SYRCK D I +K + K A +++ +E+ VP +++ N Sbjct: 60 RQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSEKTKVPNHLTFN 119 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 120 SLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 151 >gi|89112961|gb|ABD61099.1| ribosomal protein subunit 4 [Dryptodon trichophyllus] Length = 172 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++ Sbjct: 9 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIF 67 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SYRCK D I VK + K + +++ ++ Sbjct: 68 RLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITVKDRQKSKSIIIKNMDFSQ 127 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 128 KYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|14090500|gb|AAK53535.1| small ribosomal protein 4 [Brothera leana] Length = 183 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+ +S K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTXSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K V + +L+++ VP +++ N +I L + + L Sbjct: 118 ITIKNRQKSQFIVAKNIELSQKYKVPNHLTFNSLEKKGLVNQI---LNKESIGLKINELL 174 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 175 VVEYYSR 181 >gi|89112915|gb|ABD61076.1| ribosomal protein subunit 4 [Ptychomitrium formosicum] Length = 172 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ +NH+H+LVN R VNI SYRCK D I +K + K A V++ Sbjct: 62 LDNVIFRLSMAPTIPGARQLINHKHILVNNRIVNIPSYRCKPQDFITIKARQKSQAMVIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 122 NIDFSQKHKVPNHLTFNSLEKKGLVNQI---LDHGSIGLKINELLVVEYYSR 170 >gi|77019167|emb|CAH60189.1| chloroplast 30S ribosomal protein S4 [Grimmia elongata] Length = 181 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 12 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 70 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 71 LDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSQAMIIK 130 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 131 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 179 >gi|32892120|gb|AAP88999.1| ribosomal protein S4 [Passiflora citrifolia] Length = 183 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP+ ++ R + S + ++ + KQK++ +YG ++E++ + Sbjct: 1 GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRFQEKQKLRLHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++ T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 53 IAAKAKERTGKVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + + ++ +P+++++ I S + Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLRRFQYKGLVNEIIDSK---WVGLE 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|17154475|emb|CAC83914.1| ribosomal protein S4 [Cipura campanulata] Length = 182 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD ++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|162415094|gb|ABX89121.1| ribosomal protein S4 [Barbula convoluta] Length = 189 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 K+P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 2 FRTLPGLSNKTPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYR Sbjct: 58 RIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + +++ P +++ N +I L + Sbjct: 118 CKPQDFITIKDRQKSQLMITKNVEFSQKSKTPNHLTFNSLEKKGLVNQI---LAQESIGL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|146261557|gb|ABQ15088.1| ribosomal protein S4 [Crassula aff. perforata Fishbein 3778] Length = 169 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 5/171 (2%) Query: 37 HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RL Sbjct: 1 RNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRL 59 Query: 97 DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156 D I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D+I K K A + Sbjct: 60 DNILFRLSMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPSDIITAKDDKKSRALIQNY 119 Query: 157 SQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 LDSTPHEELPKHLTLHSVQYKGLVNQIIDSK---GVGLKINELLVVEYYSR 167 >gi|14090438|gb|AAK53504.1| small ribosomal protein 4 [Syrrhopodon fimbriatulus] Length = 182 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN +NI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNHIINIPSYQCKPQDFITIKDQQKHQTMIVK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P +++ N +I L + + LVVE+YSR Sbjct: 132 NINFSPKHKIPNHLTFNSVEKKGLVNQI---LDQEAIGLKINELLVVEYYSR 180 >gi|77019209|emb|CAH60209.1| chloroplast 30S ribosomal protein S4 [Dryptodon trichophyllus] Length = 176 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++ Sbjct: 13 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIF 71 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SYRCK D I VK + K + +++ ++ Sbjct: 72 RLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITVKDRQKSKSIIIKNMDFSQ 131 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 132 KYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 174 >gi|255116236|gb|ACU01170.1| small ribosomal protein subunit 4 [Calyptothecium hookeri] Length = 186 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY+CK Sbjct: 59 KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYQCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|33413203|emb|CAD86737.1| ribosomal protein small subunit 4 [Leucobryum glaucum] Length = 180 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 14 STSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K + V + + Sbjct: 73 ILFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIE 132 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 133 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLKINELLVVEYYSR 178 >gi|89112953|gb|ABD61095.1| ribosomal protein subunit 4 [Grimmia crinita] Length = 172 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 62 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSQAMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|63191831|gb|AAY34875.1| small ribosomal protein subunit 4 [Chenia leptophylla] Length = 183 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 22 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 80 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYRCK D I + + K + + +++ Sbjct: 81 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 140 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 141 KIPNHLTFNSLEKKGLINQI---LDQESIGLEINELLVVEYYSR 181 >gi|37992659|gb|AAR06508.1| small ribosomal protein 4 [Pseudospiridentopsis horrida] Length = 186 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 119 DFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|108861098|gb|ABG21421.1| ribosomal protein small subunit 4 [Marsilea mutica] Length = 198 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 11/202 (5%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K+ RR+ K+P S Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 KMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTERQ 57 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V+ Sbjct: 58 LLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVD 117 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPS 184 + SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 VPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPKGVVNQV-- 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 176 -AKRESMDLNINELLIVEYYSR 196 >gi|16565393|gb|AAL26211.1|AF313611_1 small ribosomal protein 4 [Ginkgo biloba] Length = 185 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G + K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----KSGNDPINRSSSGKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE R D I++R+ TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 56 RKAKGSTGQVLLQLLEMRSDNIIFRSGMALTIPGARQLVNHRHLLVNDRVVDIPSYRCKP 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 DVI ++ + + A + L++RD P +++++ RI S + + Sbjct: 116 QDVITIRDQQRSRAIIKNNINLSQRDKMPNHLTLHSSQYKGLVNRIIDSK---WINLKIN 172 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 173 ELLVVEYYSR 182 >gi|3914851|sp|O20230|RR4_HYMLI RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292886|emb|CAA92549.1| ribosomal protein S4 [Hymenocallis littoralis] Length = 182 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGFTSKRP----RSGSDLKNPLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLRYVQIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + A R ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASAPREELPNHLTIDSFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|6002085|emb|CAA58952.1| ribosomal protein S4 [Taxus baccata] Length = 202 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R+ K P R P + KPS + ++L+ KQ+++ Sbjct: 1 MSRYRGPRLKIINRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A RS+G T L+ LE RLD I++R TI ARQ V+HRH Sbjct: 59 HYG-LTERQLLQYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--M 175 +LVN R V+I SYRCK D+I +K + + + + L++RD VP ++++ Sbjct: 118 ILVNDRIVDIPSYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQY 177 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEF 203 + +I S + + + LVVE+ Sbjct: 178 IGLVKKIIDSKR---ISLKINELLVVEY 202 >gi|12330552|gb|AAG52813.1| ribosomal protein 4 [Calomnion complanatum] Length = 185 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK + +YG I+E++ + + A Sbjct: 1 LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKSRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 58 KAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + ++ +P +++ N +I L + + Sbjct: 118 DFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|3914854|sp|O20235|RR4_IRILU RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292911|emb|CAA92540.1| ribosomal protein S4 [Iris lutescens] Length = 182 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|62766389|gb|AAX99324.1| rpS4 [Botrychium simplex] Length = 191 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G + K+P ++ G R+ S + ++L AKQ+++ YG ++E++ Sbjct: 2 LGNSPGLTNKTP-KSKKIGSDQPISRK---ISQYCIRLEAKQRLRFNYG-LTERQLLKHV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A R+RG T + LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 RIARRARGSTGQVSLQSLEMRLDNILFRLGMSPTIPGARQLVNHRHILVNDRVVDIPSYH 116 Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVP 190 C+ DVI + + E +P ++S+ + RI Sbjct: 117 CEPNDVITARDWKNSRDLIGGNVGSSGEGGIPNHLSLSLSEDEKPKGFVNRIIDR---ES 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IGLKINELLVVEYYSR 189 >gi|157689484|gb|ABV65298.1| ribosomal protein S4 [Helianthemum grandiflorum] Length = 176 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 12/185 (6%) Query: 23 PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82 K+P ++ Q K S + ++L KQK++ +YG ++E++ + A +++G Sbjct: 1 SKTPKAKKN-------QFHPGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKG 52 Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SY CK GD+I Sbjct: 53 STGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYGCKPGDIIS 112 Query: 143 VKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201 V+ + K + + + VP++++V +I + + + LVV Sbjct: 113 VRAEQKSKTLIQNYLDSSIPKKVPKHLTVRTLQYKGLVNQIINRK---SVGLQINELLVV 169 Query: 202 EFYSR 206 E+YSR Sbjct: 170 EYYSR 174 >gi|108861070|gb|ABG21407.1| ribosomal protein small subunit 4 [Marsilea crenata] gi|108861072|gb|ABG21408.1| ribosomal protein small subunit 4 [Marsilea crenata] gi|108861092|gb|ABG21418.1| ribosomal protein small subunit 4 [Marsilea minuta] Length = 200 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E Sbjct: 1 RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRC+ D I V+ + + + R ++P+++S + + ++ Sbjct: 118 VDVPSYRCEPQDNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198 >gi|283824462|gb|ADB43047.1| small ribosomal protein 4 [Cyanolophocolea echinella] Length = 158 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 5/160 (3%) Query: 48 FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107 + ++L KQK++ +YG ++E++ + A +++G T L+ LE R D ++R Sbjct: 1 YRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQILLQLLEMRPDNTIFRLGMSS 59 Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPE 166 TI ARQ VNHRH+ +N V+I SY C+ GD I +K K K + + + L ++ +P Sbjct: 60 TIPEARQLVNHRHISINNDIVDIPSYNCEPGDTITIKNKQKSQSVITKNINLFQKLKIPS 119 Query: 167 YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ + + + ++ + + + LVVE+YSR Sbjct: 120 HLTFDSIKLRGSVNQMINR---EWVNLKINELLVVEYYSR 156 >gi|293611990|gb|ADE48439.1| ribosomal protein 4 [Dioon spinulosum] Length = 173 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 96/170 (56%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 6 NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 64 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R+ PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + + A + + Sbjct: 65 NTIFRSGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIEKNL 124 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 125 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 171 >gi|218157223|gb|ACK58428.1| ribosomal protein subunit 4 [Polytrichadelphus magellanicus] Length = 180 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 17 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 75 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN R +NI SYRCK D I +K + + A + ++ Sbjct: 76 RLGMAPTIPGARQLVNHKHILVNDRIINIPSYRCKPQDFITIKDRQESQAIITRNIDFSQ 135 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 136 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|305672333|gb|ADM63590.1| ribosomal protein S4 [Dialypetalum sp. Koopman et al. s.n.] Length = 173 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KSP + + Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKSPKDRK----DRRNQSGSWKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I K K + + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTITAKDDGKSKVLIQNSLDSSPHEELPNHLTLDPVQYKGLVNQIIDS 172 >gi|184127963|gb|ACC67881.1| ribosomal protein small subunit 4 [Marattia sylvatica] gi|184127965|gb|ACC67882.1| ribosomal protein small subunit 4 [Marattia sylvatica] Length = 191 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G + ++ + K K S + ++L AKQ+++ YG ++E++ + A Sbjct: 2 DLPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIA 59 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 60 GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 119 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193 D+I V+ ++ V + + +D +PE+++++ + RI + + Sbjct: 120 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 176 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 177 NINELLVVEYYSR 189 >gi|254995569|emb|CAO82743.1| ribosomal protein S4 [Lycopodium annotinum] Length = 172 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 95/169 (56%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 6 STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + +S+ A + + ++ Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRAIIAKNNK 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++++ +I + + LVVE+YSR Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170 >gi|22854697|gb|AAN09768.1| small ribosomal protein 4 [Dicranoloma billarderi] Length = 182 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 D +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I VK + K A +++ Sbjct: 72 SDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITVKNRQKSQAMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ + +I L + + LVVE+YSR Sbjct: 132 NIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|289599947|gb|ADD12924.1| ribosomal protein S4 [Tetracera billardierei] gi|289599949|gb|ADD12925.1| ribosomal protein S4 [Tetracera empedoclea] gi|289599961|gb|ADD12931.1| ribosomal protein S4 [Tetracera scandens] gi|289599963|gb|ADD12932.1| ribosomal protein S4 [Tetracera volubilis subsp. volubilis] Length = 165 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 60 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 163 >gi|17154626|emb|CAC83925.1| ribosomal protein S4 [Moraea sisyrinchium] Length = 182 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPQEELPNHLTIDPIQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|27227933|gb|AAN85764.1| ribosomal protein subunit 4 [Anomobryum humillimum] Length = 186 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G ++ +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKTPQLKTNSINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R VNI SYRCK Sbjct: 59 KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPE 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + L ++ P +++ N +I L + + Sbjct: 119 DSITIKNRKKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LXRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|63191805|gb|AAY34862.1| small ribosomal protein subunit 4 [Cinclidotus aquaticus] Length = 195 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G + +S +K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 13 GLSNKIPHLKSSSTNQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKA 69 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 70 KGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDF 129 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I + + K + + +++ +P +++ N +I L + + L Sbjct: 130 ITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESIGLKINELL 186 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 187 VVEYYSR 193 >gi|62288933|sp|P69639|RR4_CRONU RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288937|sp|P69643|RR4_GLACO RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288941|sp|P69647|RR4_MICJU RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292827|emb|CAA92535.1| ribosomal protein S4 [Crocus nudiflorus] gi|2292880|emb|CAA92539.1| ribosomal protein S4 [Gladiolus communis] gi|2292930|emb|CAA92544.1| ribosomal protein S4 [Micranthus junceus] gi|17154590|emb|CAC79545.1| ribosomal protein S4 [Micranthus junceus] Length = 183 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|17154605|emb|CAC83912.1| ribosomal protein S4 [Hesperoxiphion peruvianum] Length = 182 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P S G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----STGSVLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|51860475|gb|AAU11374.1| ribosomal protein small subunit 4 [Gnetum leptostachyum] Length = 198 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P + R K S L+ KQK++ ++G + Sbjct: 1 GPRFKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R + + +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN Sbjct: 57 TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLDLAGTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182 VNI SY+CK DVI +K K + ++ E +P +++++ +I Sbjct: 117 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQKKGIVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYS 205 + ++ LV+E+YS Sbjct: 177 IDRKD---IQLNIKEMLVIEYYS 196 >gi|320455024|dbj|BAJ65659.1| small ribosomal protein 4 [Metzgeria duricosta] gi|320455030|dbj|BAJ65662.1| small ribosomal protein 4 [Metzgeria senjoana] Length = 188 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKLKSSY---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P ++ + + + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWIDLKINELLVV 188 >gi|90970050|gb|ABE02794.1| ribosomal protein S4 [Passiflora auriculata] Length = 183 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP + R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSDF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPAGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K GD+I VK + K + ++ R+ +P ++ + +I S + + Sbjct: 113 KPGDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSKR---VGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|33413161|emb|CAD86717.1| ribosomal protein small subunit 4 [Dryptodon patens] Length = 181 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 12 INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 70 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + +++ Sbjct: 71 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSKSMIIK 130 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N +I L + + LVVE+YSR Sbjct: 131 NMDFYQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 179 >gi|33413255|emb|CAD86762.1| ribosomal protein small subunit 4 [Cinclidotus fontinaloides] Length = 182 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + + ++ Sbjct: 78 RLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRQKSQVMITKNVEFSQ 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 138 KSKIPNHLTFNFLEKKGLINQI---LDQESIGLKINELLVVEYYSR 180 >gi|3914860|sp|O20273|RR4_PATFR RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292980|emb|CAA92546.1| ribosomal protein S4 [Patersonia fragilis] Length = 184 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 11/192 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGNDLKNQLRSVKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A + +G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKVKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIPS 184 V+I SYRCK D+I K K + A + + + ++P +++++ +I Sbjct: 116 VDIPSYRCKPQDIITTKDKQRSKALIQNYIASSTQPQEELPNHLTIDAFQYKGLVNQIID 175 Query: 185 SLKDVPYPVIMQ 196 S + + Sbjct: 176 SK---WIGLKIN 184 >gi|108861084|gb|ABG21414.1| ribosomal protein small subunit 4 [Marsilea gibba] Length = 199 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+ K+P S Q K S + ++L AKQ+++ YG ++E+ Sbjct: 1 LKILRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V Sbjct: 58 QLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIP 183 ++ SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 DVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV- 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 177 --AKRESMDLNINELLIVEYYSR 197 >gi|67036054|gb|AAY62953.1| small ribosomal protein subunit 4 [Bryoandersonia illecebra] Length = 190 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 8 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 63 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 64 AKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQD 123 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K + + + ++ +P +++ + +I L + + Sbjct: 124 FITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINEL 180 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 181 LVVEYYSR 188 >gi|3914857|sp|O20255|RR4_LAPNE RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292923|emb|CAA92542.1| ribosomal protein S4 [Lapeirousia neglecta] Length = 183 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPQQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|3914848|sp|O20215|RR4_FRESP RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292870|emb|CAA92538.1| ribosomal protein S4 [Freesia sp. 'Lejeune 1997'] Length = 183 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K + A + + R ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPRQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|33411998|emb|CAD86773.1| ribosomal protein small subunit 4 [Bryobartramia novae-valesiae] Length = 178 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +V+R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K A +++ Sbjct: 70 LDNVVFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQDFISIKNRQKSQAIIIK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP ++S + +I L + + LVVE+ SR Sbjct: 130 NIDFSQKYKVPNHLSFDSLQKKGLVNQI---LDRESIGLKINELLVVEYDSR 178 >gi|51860493|gb|AAU11383.1| ribosomal protein small subunit 4 [Ephedra somalensis] Length = 200 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 12/205 (5%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+ K P + R K S + + L+ KQK++ +YG ++ Sbjct: 1 PRFKIIRRLKTLPGLTSKRPKYKKRV---QRSSRPWWKKSQYLVCLQEKQKIRFHYG-LT 56 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 57 ERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHH 116 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVR 181 V+I SYRCK D+I +K K + + + VP Y++ N + Sbjct: 117 IVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNK 176 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + ++ LV+E+YSR Sbjct: 177 IIDTKD---LQLKIKEMLVIEYYSR 198 >gi|289599915|gb|ADD12908.1| ribosomal protein S4 [Hibbertia empetrifolia subsp. empetrifolia] Length = 165 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNH+H+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 60 FRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDIITVKDEHKSRAMIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 163 >gi|37683546|gb|AAQ98824.1| small ribosomal protein 4 [Pogonatum tortile] Length = 174 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 11 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 69 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I K + + A + + ++ Sbjct: 70 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITRKNRQESQAIIAKNIDFSQ 129 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 130 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 172 >gi|108861082|gb|ABG21413.1| ribosomal protein small subunit 4 [Marsilea farinosa] gi|108861102|gb|ABG21423.1| ribosomal protein small subunit 4 [Marsilea nashii] gi|108861122|gb|ABG21433.1| ribosomal protein small subunit 4 [Marsilea villosa] Length = 199 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 11/203 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E+ Sbjct: 1 LKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V Sbjct: 58 QLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRIP 183 ++ SYRC+ D+I V+ + + ++P+++S + + ++ Sbjct: 118 DVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV- 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 177 --AKRESMDLNINELLIVEYYSR 197 >gi|17154706|emb|CAC79543.1| ribosomal protein S4 [Watsonia angusta] Length = 183 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 LQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|67035889|gb|AAY62871.1| small ribosomal protein subunit 4 [Platygyrium repens] Length = 186 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNXXPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P ++ + +I + + Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQIVDR---ESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|289599887|gb|ADD12894.1| ribosomal protein S4 [Doliocarpus major subsp. major] Length = 165 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 92/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QL 159 +R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSF 119 Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 163 >gi|293634109|gb|ADE60434.1| ribosomal protein subunit 4 [Polytrichastrum sphaerothecium] Length = 174 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 11 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 69 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + + + ++ Sbjct: 70 RLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKPQDFITIKDRQESQTIIARNIDFSQ 129 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 130 KYKIPNHLTFNSLEKKGLVNQI---LDRESISLKINELLVVEYYSR 172 >gi|289599895|gb|ADD12898.1| ribosomal protein S4 [Hibbertia amplexicaulis] Length = 163 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN V+I SYRC D+I VK + K A + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDCIVDIPSYRCNPRDIITVKDEHKSRAMIQNYLDSSSHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+Y++++ +I S + + LVVE+YSR Sbjct: 121 ELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161 >gi|328541098|gb|AEB21773.1| ribosomal protein S4 [Bazzania pearsonii] Length = 154 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 5/155 (3%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK++ +YG ++E++ + A +++G T L+ LE RLD ++R PTI A Sbjct: 2 EEKQKLRFHYG-LTERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGA 60 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171 RQ VNH+HV +N V+I SY CK GD+I ++ K K + + + L + +P +++ + Sbjct: 61 RQLVNHKHVAINSNIVDIPSYNCKPGDIITIRDKQKSXSIITKNINLFQNLKIPSHLTFD 120 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + + + LVVE+YSR Sbjct: 121 SIKLCGSINQTINR---EWINLKINELLVVEYYSR 152 >gi|289599897|gb|ADD12899.1| ribosomal protein S4 [Hibbertia banksii] Length = 167 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNHRH+LVN R ++I SYRCK D+I VK + K A + Sbjct: 60 ILFRLGMASTIPGARQLVNHRHILVNDRILDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SSPHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 165 >gi|289599933|gb|ADD12917.1| ribosomal protein S4 [Hibbertia saligna] Length = 167 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 3 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 61 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 62 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 121 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+Y++++ +I S + + LVVE+YSR Sbjct: 122 SHEELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165 >gi|17154615|emb|CAC83920.1| ribosomal protein S4 [Solenomelus pedunculatus] Length = 182 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDLLQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|293612006|gb|ADE48447.1| ribosomal protein 4 [Encephalartos whitelockii] Length = 174 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 7 NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 65 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + K A + + Sbjct: 66 NTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNI 125 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 126 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 172 >gi|63101023|gb|AAY33136.1| small ribosomal protein 4 [Hondaella brachytheciella] Length = 184 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 8/189 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+P R ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 PGLTNKTP---RLNSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 57 KAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINE 173 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 174 LLVVEYYSR 182 >gi|116010527|emb|CAL37370.1| ribosomal protein S4 [Trithrinax brasiliensis] gi|116010529|emb|CAL38868.1| ribosomal protein S4 [Phoenix reclinata] Length = 182 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P++++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|74273091|gb|ABA01245.1| ribosomal protein S4 [Passiflora multiflora] Length = 183 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|289599903|gb|ADD12902.1| ribosomal protein S4 [Hibbertia commutata] Length = 167 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 3 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 61 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 62 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 121 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+Y++++ +I S + + LVVE+YSR Sbjct: 122 SHEELPKYLTLHAFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165 >gi|3914846|sp|O20210|RR4_DIERO RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292844|emb|CAA92537.1| ribosomal protein S4 [Dietes robinsoniana] Length = 182 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P + G + R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRPGS----GSDPKNKSRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|289599917|gb|ADD12909.1| ribosomal protein S4 [Hibbertia exasperata] Length = 166 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I Sbjct: 1 SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNI 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNH+H+LVN V+I SYRCK D+I VK + K A + Sbjct: 60 LFRLGMASTIPGARQLVNHKHILVNDGIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SPHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 164 >gi|3914868|sp|O36054|RR4_SPASP RecName: Full=30S ribosomal protein S4, chloroplastic gi|2293070|emb|CAA92547.1| ribosomal protein S4 [Sparaxis sp. 'Lejeune 1997'] Length = 183 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPLQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|157689496|gb|ABV65304.1| ribosomal protein S4 [Hypericum kalmianum] Length = 184 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 KSP+ + + Q K S + ++L KQK++ +YG ++E++ + + A + Sbjct: 1 GLTSKSPIVKKRNP--IRYQPSYFKKSQYHIRLEEKQKLRFHYG-LTERQLLNYVRLAAK 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+ VNG VNI S+RCK GD Sbjct: 58 AKGQTGQVLLQLLEMRLDNILFRLGMGSTIPQARQLVNHRHIFVNGHIVNIPSFRCKPGD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I V+ + K V + R ++ ++++ +I + + + + Sbjct: 118 IITVRDEQKSRTMVENYLNSSSRKELSNHLTLRRFEYTGLVNQIIDTHR---VGLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|293611960|gb|ADE48424.1| ribosomal protein 4 [Ceratozamia hildae] Length = 179 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 8/183 (4%) Query: 25 SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 +R+ R+ S + ++L KQK++ +YG ++E++ + A R++G T Sbjct: 2 KRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGST 57 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRC DVI V+ Sbjct: 58 GQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCNPRDVITVR 117 Query: 145 QKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 + + A + + L+++D +P +++++ +I S + + LVVE+ Sbjct: 118 DQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVHQIIDSK---WISLKINELLVVEY 174 Query: 204 YSR 206 YSR Sbjct: 175 YSR 177 >gi|51860567|gb|AAU11420.1| ribosomal protein small subunit 4 [Ephedra distachya] Length = 202 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI RR+ K P + +H R K S + + L+ KQK++ +YG Sbjct: 2 GPRSKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 57 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 117 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 176 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 177 NKIIDTKD---LQLKIKEMLVIEYYSR 200 >gi|33413181|emb|CAD86727.1| ribosomal protein small subunit 4 [Fissidens fasciculatus] Length = 182 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE R D I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRSDNIIFRLGMTPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K +++ +++ +P +++ N +I + + L Sbjct: 117 ITIKDQQKYQVMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQIIDQ---ESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|58293893|gb|AAW69893.1| small ribosomal protein 4 [Zygodon forsteri] Length = 189 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTSKLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SY Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHHIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D + +K + K V + + +P ++ N + +I L Sbjct: 117 RCKPQDSLTIKNRQKSQDIVAKNINFYPKYKIPNHLIYNSLEKKGSVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|67035855|gb|AAY62854.1| small ribosomal protein subunit 4 [Meiothecium chlorocladum] Length = 179 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 13 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + + Sbjct: 72 IIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQDFITIKNQQKSEIIINKNIE 131 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N +I L + + LVVE+YSR Sbjct: 132 FYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDLKINELLVVEYYSR 177 >gi|14090466|gb|AAK53518.1| small ribosomal protein 4 [Pseudosymblepharis schimperiana] Length = 182 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 21 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K + + ++ Sbjct: 80 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKS 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 140 KIPNHLTFNSLEKKGLVNQI---LDQELIGLKINELLVVEYYSR 180 >gi|7576577|gb|AAF63901.1| ribosomal protein system 4 [Platygyrium repens] Length = 185 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNISPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + + ++ +P ++ + +I + + Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQIVDR---ESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|20531057|gb|AAM27351.1| ribosomal protein 4 [Buxbaumia viridis] Length = 192 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K P Y + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGSLPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN +NI Sbjct: 57 LKYIRIARRTKGSTGEILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNNIINI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SY CK D I +K K V + +L+++ +P +++ N +I L Sbjct: 117 PSYCCKPQDFITIKNSQKSQTIVTKNIELSQKSKIPNHLTFNFLEKKGLVNQI---LDHE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 SIGLKINXLLVVEYYSR 190 >gi|17154708|emb|CAC79544.1| ribosomal protein S4 [Thereianthus racemosus] Length = 183 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSVLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|89147840|gb|ABD62768.1| ribosomal protein 4 [Riccardia multifida] Length = 197 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+G + P +S + K S + L+L KQK++ +YG ++E+ Sbjct: 4 TKIIRRLGTLPGLTSRIP---KSRSSSIDRSSANKKISQYRLRLEEKQKLRFHYG-LTER 59 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T L+ LE RLD ++R VPTI AARQ VNHRHVL+N V Sbjct: 60 QLLKYVCVAKKAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHVLINANMV 119 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 NI SY CK GD+I +K + + + + + + + +P +++ + RI Sbjct: 120 NIPSYNCKTGDIITIKARERNRLKIGSDTNSIQKTGIPNHLAFKSVEFCGSVNRIIDR-- 177 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 -EGIDLKINELLVVEYYSR 195 >gi|3098248|gb|AAC15572.1| small ribosomal protein 4 [Rhizogonium novae-hollandiae] Length = 192 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 8/197 (4%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K P S + K S + ++L KQK++ +YG I+E++ Sbjct: 1 IIRRLGTLPGLNNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R VNI Sbjct: 57 LNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK D I +K + K + + ++ +P ++ N +I L Sbjct: 117 PSYRCKPQDFITIKDQQKYQTIISKNINFYQKHKIPNHLINNSLEKKGLVNQI---LDRE 173 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LV+E+YSR Sbjct: 174 SIDLKINELLVLEYYSR 190 >gi|289599913|gb|ADD12907.1| ribosomal protein S4 [Hibbertia echiifolia] Length = 165 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVNG V+I SYRCK D+I VK + K A + + Sbjct: 60 FRLGMASTIPGARQLVNHRHILVNGGIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDSK---WIVLKINELLVVEYYSR 163 >gi|293611994|gb|ADE48441.1| ribosomal protein 4 [Encephalartos ferox] Length = 175 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 8/180 (4%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 +R+ R+ S + ++L KQK++ +YG ++E++ + A R++G T Sbjct: 1 KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQV 56 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + Sbjct: 57 LLQLLEMRSDNTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQ 116 Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 K A + + L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 117 KSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 173 >gi|293611978|gb|ADE48433.1| ribosomal protein 4 [Cycas simplicipinna] Length = 182 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G +R+ R+ S + ++ KQK++ +YG ++E++ + A R+ Sbjct: 1 GLTNKRPKSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGRA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK DV Sbjct: 57 KGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 116 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I ++ + + A + + L+++D +P +++++ +I S + + L Sbjct: 117 ITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK---WISLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|14090504|gb|AAK53537.1| small ribosomal protein 4 [Mitthyridium undulatum] Length = 183 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K +S K S + ++L KQK++ +YG ++E++ + + A + Sbjct: 1 LTNKXXPQLKSNSINQ--STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKV 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SY+CK D Sbjct: 58 KGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K +++ ++ + + P +++ N +I L + + L Sbjct: 118 ITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELL 174 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 175 VVEYYSR 181 >gi|56416574|ref|YP_153648.1| 30S ribosomal protein S4 [Anaplasma marginale str. St. Maries] gi|56387806|gb|AAV86393.1| ribosomal protein S4 [Anaplasma marginale str. St. Maries] Length = 178 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 79/172 (45%), Positives = 109/172 (63%), Gaps = 2/172 (1%) Query: 34 PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93 G HG K S FG Q A QK K YY +S K+ + F A +GDT NL+ LE Sbjct: 8 SGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSSKQLTNTFLRAYNRKGDTGDNLVGALE 66 Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 SRL +VY A FVPT+F+ARQ V+H+HV VNG+ VNI S+ K GDV+++++++ +L V Sbjct: 67 SRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKVVNIPSFSVKPGDVVQIRERATELPMV 126 Query: 154 LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 L A Q ER VP+++ V+ A ++R+P + VPYP M+ NLVVEF+S Sbjct: 127 LAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE-VPYPANMEVNLVVEFFS 177 >gi|289599923|gb|ADD12912.1| ribosomal protein S4 [Hibbertia hamulosa] Length = 163 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNSLDSSPHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 161 >gi|3914843|sp|O20103|RR4_CROSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292829|emb|CAA92534.1| ribosomal protein S4 [Crocosmia sp. 'Lejeune 1997'] Length = 183 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|117306754|emb|CAH73346.1| ribosomal protein S4 [Catagonium nitidum] Length = 183 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 14 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 72 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K A + + Sbjct: 73 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSEAIISK 132 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 133 NIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 181 >gi|37992425|gb|AAR06391.1| small ribosomal protein 4 [Ancistrodes genuflexa] Length = 185 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLSNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T + E+R D I++R PTI ARQ VNHRH+LVN V+I SYRCK Sbjct: 58 KAKGSTGEVSLQLPETRSDNIIFRLGMTPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K A + + + ++ +P +++ N +I L + + Sbjct: 118 DFITIKDQRKSEAIIGKNIEFYQKYKIPNHLTYNLLEKKGLVNQI---LDRESISLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|289599901|gb|ADD12901.1| ribosomal protein S4 [Hibbertia bracteata] Length = 168 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 4 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 62 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + + Sbjct: 63 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRDLIQNYLDSS 122 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 123 PHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 166 >gi|77862531|gb|ABB04538.1| small ribosomal protein 4 [Lunularia cruciata] Length = 180 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 11 INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+L+N +V+I SY CK DVI +K + K + + + Sbjct: 70 LDNIIFRLGMAPTIPGARQLVNHRHILINDNTVDIPSYNCKPKDVITIKNRQKSQSIITK 129 Query: 156 AS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P ++S + +I + + LVVE+YSR Sbjct: 130 NLTSFQKQKIPNHLSFDLIQFQGLINQIIDR---EWIYLKINELLVVEYYSR 178 >gi|74273093|gb|ABA01246.1| ribosomal protein S4 [Passiflora penduliflora] Length = 183 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|184127983|gb|ACC67891.1| ribosomal protein small subunit 4 [Marattia attenuata] Length = 188 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 9/191 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + ++ + K K S + ++L AKQ+++ YG ++E++ + A + Sbjct: 1 PGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGK 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIM 195 +I V+ ++ V + + +D +PE+++++ + RI + + + Sbjct: 119 IISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNI 175 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 176 NELLVVEYYSR 186 >gi|293633971|gb|ADE60365.1| ribosomal protein subunit 4 [Atrichum androgynum] Length = 182 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P Y ++ K S + ++L KQK++ +YG I+E++ + + A R+ Sbjct: 1 LTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNH+H+LVN R VNI SYRCK D Sbjct: 57 KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + + A +++ +P +++ N +I L + + L Sbjct: 117 ITIKNRQEFQAITTRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLEINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|254995573|emb|CAO82745.1| ribosomal protein S4 [Lycopodium clavatum] Length = 172 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 6 STSSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + +S+ + + ++ Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRTIIAKNNK 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++++ +I + + LVVE+YSR Sbjct: 125 ISQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170 >gi|74273205|gb|ABA01302.1| ribosomal protein S4 [Passiflora tacsonioides] Length = 183 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R S+ S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSSRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|63101031|gb|AAY33140.1| small ribosomal protein 4 [Iwatsukiella leucotricha] Length = 182 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 KGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K + + + ++ +P +++ + +I L + + L Sbjct: 117 ITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|289599899|gb|ADD12900.1| ribosomal protein S4 [Hibbertia baudouinii] Length = 165 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 60 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I + + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDNK---WIGLKINELLVVEYYSR 163 >gi|89112917|gb|ABD61077.1| ribosomal protein subunit 4 [Ptychomitrium gardneri] Length = 172 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ +NHRH+LVN R VNI SYRCK D I +K + K A V++ Sbjct: 62 LDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNIPSYRCKPQDFITIKARQKSQAMVIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ VP +++ N +I L + + LVVE+YSR Sbjct: 122 NVDFSQNYKVPNHLTFNSLEKKGLVNQI---LDHGSIGLKINELLVVEYYSR 170 >gi|255116226|gb|ACU01165.1| small ribosomal protein subunit 4 [Neodolichomitra yunnanensis] Length = 189 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 K+P ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 2 FRTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 58 RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYR 117 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 118 CKPQDFITIKDQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLINQI---LDRESIGL 174 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 175 KINELLVVEYYSR 187 >gi|89112947|gb|ABD61092.1| ribosomal protein subunit 4 [Grimmia pulvinata] Length = 172 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRC+ D I +K + K + +++ Sbjct: 62 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCRPQDFITIKDRQKSQSMIIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170 >gi|46811034|gb|AAT01835.1| small ribosomal protein 4 [Neohodgsonia mirabilis] Length = 178 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 9 INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 67 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+L+N +V+I SY CK DVI +K + K + V + Sbjct: 68 LDNIIFRLGMAPTIPGARQLVNHRHILINDNTVDIPSYNCKPKDVITIKNRQKSQSIVTK 127 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ + +I + + LVVE+YSR Sbjct: 128 NLNSFQKQKIPNHLNFDLIQFKGLVNQIIDR---EWIYLKINELLVVEYYSR 176 >gi|92417439|gb|ABE76815.1| ribosomal protein subunit 4 [Lycopodium clavatum] Length = 175 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 9 STSSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + +S+ + + ++ Sbjct: 68 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRTIIAKNNK 127 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++++ +I + + LVVE+YSR Sbjct: 128 ISQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 173 >gi|17154611|emb|CAC83917.1| ribosomal protein S4 [Galaxia sp. Goldblatt and Nanni 10254] Length = 182 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDPKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|53830732|gb|AAU95215.1| small ribosomal protein 4 [Syrrhopodon involutus] Length = 177 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 8 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ Sbjct: 67 LDNIIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFITIKDQQKYQTMIIK 126 Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ N +I L + + LVVE+YSR Sbjct: 127 NTNFFSKHKTPNHLTFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175 >gi|255116222|gb|ACU01163.1| small ribosomal protein subunit 4 [Leptocladiella delicatula] Length = 182 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 8/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 KGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I +K + K + + + ++ +P +++ + +I L + + L Sbjct: 117 ITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELL 173 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 174 VVEYYSR 180 >gi|17154613|emb|CAC83919.1| ribosomal protein S4 [Olsynium filifolium] Length = 182 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGTLPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEKKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 QQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSSHEELPNHLTIDLIQYKGLVNKIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|51860471|gb|AAU11372.1| ribosomal protein small subunit 4 [Gnetum montanum] Length = 199 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 10/204 (4%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 KI RR+ K P + R K S L+ KQK++ ++G + Sbjct: 1 GPLFKIIRRLKTLPVLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R + + +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN Sbjct: 57 TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVND 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182 VNI SY+CK DVI +K K + ++ E +P +++++ +I Sbjct: 117 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 177 IDRKD---IQLNIKEMLVIEYYSR 197 >gi|32879555|emb|CAE11888.1| ribosomal protein S4 [Duthiastrum linifolium] Length = 183 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P + L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|74273135|gb|ABA01267.1| ribosomal protein S4 [Passiflora sexflora] Length = 183 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R+ +P ++ + +I S + Sbjct: 113 KPCDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPQKYKGLVNQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INELLVVEYYSR 181 >gi|289599860|gb|ADD12881.1| ribosomal protein S4 [Davilla flexuosa] gi|289599862|gb|ADD12882.1| ribosomal protein S4 [Davilla kunthii] gi|289599864|gb|ADD12883.1| ribosomal protein S4 [Davilla lacunosa] Length = 163 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN R VNI SYRCK D+I VK + K A + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVNIPSYRCKPRDIITVKDEHKSRALIQNYLDSSPHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161 >gi|309390250|gb|ADO78130.1| SSU ribosomal protein S4P [Halanaerobium praevalens DSM 2228] Length = 198 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+++ + + K RR+G N++G PK+ R K S +G QL KQ+++ Sbjct: 1 MARKRNPRFKESRRLGLNIYGHPKAMKRADGTF-----NRANRKLSNYGQQLLEKQRLRA 55 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + E KF KEA + G NLI LE RLD +VYRA F +I ARQ V H H Sbjct: 56 YYG-LMENKFSRYVKEAVKENGVAGDNLIKSLEKRLDNLVYRAGFARSIRQARQMVVHGH 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ ++I SY K GD I ++ K ++ E EY+ ++DN A Sbjct: 115 ILVNGKKIDIPSYAIKIGDQISLRNKYRKNNLFRENFLDRHLSEFEYLERDYDNFSAKLK 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+ + LV+EFYSR Sbjct: 175 A---EIEIDEIPIEINDQLVIEFYSR 197 >gi|3914841|sp|O19995|RR4_BABST RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292746|emb|CAA92532.1| ribosomal protein S4 [Babiana stricta] Length = 183 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNKIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|289599937|gb|ADD12919.1| ribosomal protein S4 [Hibbertia vestita] Length = 165 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + + Sbjct: 60 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRDLIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 163 >gi|17154624|emb|CAC83924.1| ribosomal protein S4 [Pardanthopsis dichotoma] Length = 183 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I +YRCK D+I + K + A + + + ++P +++++ I S Sbjct: 116 VDIPAYRCKPRDIITTRNKQRSKALIQNXIASSPHQGELPNHLTIDPFQYKGLVNPIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|3914866|sp|O36051|RR4_NEOSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292976|emb|CAA92545.1| ribosomal protein S4 [Neomarica sp. 'Lejeune 1997'] Length = 182 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WVGLKIN 182 >gi|42718058|gb|AAS38451.1| rps4 [Splachnum luteum] Length = 189 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P S + K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKIPQLKSSS---XNQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 RCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLIYNSLKNQGLVNQILDRQ---SIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|52788813|gb|AAU87380.1| ribosomal protein small subunit 4 [Pilularia globulifera] Length = 196 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ ++ Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 IRRLKSLPGLTGKASKQKKTRVAAE--QSTSKKISQFCVRLEAKQRLRFNYG-VTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD +V+ PTI AARQ VNHRH+LVN R V++ Sbjct: 58 RYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRIVDVP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186 SYRC+ D+I V+ + + + R ++P ++S + + ++ Sbjct: 118 SYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV---A 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 NRESIDLNINELLVVEYYSR 194 >gi|108861080|gb|ABG21412.1| ribosomal protein small subunit 4 [Marsilea fadeniana] Length = 199 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 11/203 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+ K+P S Q K S + ++L AKQ+++ YG ++E+ Sbjct: 1 LKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTER 57 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V Sbjct: 58 QLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIV 117 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRIP 183 ++ SYRC+ D I V+ + + ++P+++S + + ++ Sbjct: 118 DVPSYRCEPQDNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV- 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 177 --AKRESMDLNINELLIVEYYSR 197 >gi|305672323|gb|ADM63585.1| ribosomal protein S4 [Pratia angulata] Length = 173 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KSP + + Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGTLPGLTTKSPKDRK----DRRNQSGSRKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I K K + + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTITAKDDGKSKVLIQNSLDSSPHEELPNHLTLDSVQYKGLVNQIIDS 172 >gi|289599909|gb|ADD12905.1| ribosomal protein S4 [Hibbertia dentata] Length = 164 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 3 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 61 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 62 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSSHE 121 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+Y++++ +I S + + LVVE+YSR Sbjct: 122 ELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 162 >gi|254995577|emb|CAO82747.1| ribosomal protein S4 [Lycopodium fastigiatum] gi|254995583|emb|CAO82750.1| ribosomal protein S4 [Lycopodium volubile] Length = 172 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 6 STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + + + A + + ++ Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRPESRAIIAKNNK 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++++ +I + + LVVE+YSR Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170 >gi|184127959|gb|ACC67879.1| ribosomal protein small subunit 4 [Marattia salicina] Length = 189 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + ++ + K K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 LPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAG 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194 D+I V+ ++ V + + +D +PE+++++ + RI + + Sbjct: 119 DIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|289599883|gb|ADD12892.1| ribosomal protein S4 [Dillenia triquetra] Length = 167 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 1 QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI ARQ VNHRH+LVN R V+I SYRCK D++ VK + K A + Sbjct: 60 ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKNEHKSRAMIQNYLD 119 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SSPHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 165 >gi|51860501|gb|AAU11387.1| ribosomal protein small subunit 4 [Ephedra strobilacea] Length = 202 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P + +H R K S + + L+ KQK++ +YG + Sbjct: 3 PRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-L 57 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 58 TERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNH 117 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFV 180 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 118 HIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVN 177 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 178 KIIDTKD---LQLKIKEMLVIEYYSR 200 >gi|117306742|emb|CAH73339.1| ribosomal protein S4 [Lepyrodon pseudolagurus] Length = 183 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T + E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 AKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYMVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A + + + ++ +P +++ + +I L + + Sbjct: 117 FITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|14090442|gb|AAK53506.1| small ribosomal protein 4 [Calymperes afzelii] Length = 182 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + + A +++G T L+ FLE RLD I++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKTKGSTGQILLQFLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ + + Sbjct: 78 RLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTNFSP 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 138 KYKIPSHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|7576625|gb|AAF63925.1| ribosomal protein system 4 [Curviramea mexicana] Length = 168 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 + S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 3 STSNTXISQYRIRLAEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDN 61 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + + Sbjct: 62 VIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIE 121 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ + +I L + + LVVE+YSR Sbjct: 122 FSQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 167 >gi|32401791|gb|AAP80884.1| small ribosomal protein 4 [Picea smithiana] Length = 193 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R K P N + + K S + ++ KQK++ +YG ++E++ Sbjct: 6 RPKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKY 60 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE R D I+++ PTI ARQ VNH H+ VN V+I SY Sbjct: 61 VRIARRAKGSTGQVLLQLLEMRSDNILFQLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 120 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK DVI ++ + + + + L +RD +P +++ + +I S Sbjct: 121 PCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFINQIIDSK---WIS 177 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 LKINELLVVEYYSR 191 >gi|289599885|gb|ADD12893.1| ribosomal protein S4 [Doliocarpus elegans] Length = 163 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAER 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSFPHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161 >gi|168704561|ref|ZP_02736838.1| 30S ribosomal protein S4 [Gemmata obscuriglobus UQM 2246] Length = 202 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 109/208 (52%), Gaps = 8/208 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ K K++R +G ++ + + R Y PG+HGQ RK K S +GL LR K+K+ Sbjct: 1 MSRHSQPKGKVNRALGMVIYEKRGAVKALERREYRPGMHGQ-RKGKVSEYGLALREKKKI 59 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K YYG + E++ ++ A +S +T L+ E RLD +V RA F T ARQ VNH Sbjct: 60 KHYYG-LHERQLVRFYQLATKSPENTGTELLVLCERRLDNVVRRAGFARTRDEARQGVNH 118 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H VNGR V++ SY K GDV+ VK + E +++ + + + T Sbjct: 119 GHFQVNGRKVDVASYLVKAGDVVAVKARPNLQKKYRERLTEGLHSA-DWLVSDAEALSFT 177 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P+ DV PV +Q V+E SR Sbjct: 178 VTRLPA-DGDVSLPVDIQR--VIEILSR 202 >gi|32401789|gb|AAP80883.1| small ribosomal protein 4 [Picea orientalis] Length = 192 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R K P N + + K S + ++ KQK++ +YG ++E++ Sbjct: 5 RPKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKY 59 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE R D I+++ PTI ARQ VNH H+ VN V+I SY Sbjct: 60 VRIARRAKGSTGQVLLQLLEMRSDNILFQLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 119 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK DVI ++ + + + + L +RD +P +++ + +I S Sbjct: 120 PCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFINQIIDSK---WIS 176 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 LKINELLVVEYYSR 190 >gi|15145830|gb|AAK83533.1| rps4 [Tetraplodon pallidus] Length = 189 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V I SY Sbjct: 57 VRTARKAKGSTGEILLQLLEMRLDNVIFRLGXAPTIPGARQLVNHRHILVNDRIVXIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K A + + + ++ +P +++ N I L Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLQKQGLVNPI---LDRESXG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+Y R Sbjct: 174 LKINELLVVEYYPR 187 >gi|58293859|gb|AAW69877.1| small ribosomal protein 4 [Bryomaltaea obtusifolia] gi|63191759|gb|AAY34839.1| small ribosomal protein subunit 4 [Bryomaltaea obtusifolia] Length = 187 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G +P + ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTIXTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD +++ PTI ARQ +NHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEVLLQLLEMRLDNVIFLLGMAPTIPGARQLINHRHILVNDHIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + ++ +P +++ N +I L + Sbjct: 117 KPQDSITIKSRQKSQNIINKNIDFYQKHRIPNHLTYNSLEKKGLVNQI---LNRELIGLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|305672279|gb|ADM63563.1| ribosomal protein S4 [Abrophyllum ornans] gi|305672287|gb|ADM63567.1| ribosomal protein S4 [Carpodetus sp. Johns 9563] Length = 173 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + R ++P +++++ +I S Sbjct: 116 IPSYRCKPQDTITARDEQKSRALIQNSLDSSPREELPNHLTLHPFQYKGLVNQIIDS 172 >gi|89112919|gb|ABD61078.1| ribosomal protein subunit 4 [Ptychomitrium sellowianum] Length = 172 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 3 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ +NHRH+LVN R VNI SYRCK D I +K + K A V++ Sbjct: 62 LDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNIPSYRCKPQDFITLKARQKSQAMVIK 121 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ N +I L + + LVVE+YSR Sbjct: 122 NVDFSQKYKVPNHLTFNSLEKKGLVNQI---LNHGSIGLKINELLVVEYYSR 170 >gi|320455044|dbj|BAJ65669.1| small ribosomal protein 4 [Metzgeria lindbergii] Length = 187 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P ++ + N++ + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTNLIGSVNRMINR- 175 Query: 187 KDVPYPVIMQPNLV 200 + + LV Sbjct: 176 --EWIDLKINELLV 187 >gi|14090472|gb|AAK53521.1| small ribosomal protein 4 [Fissidens philonotulus] Length = 182 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 16 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYIRIARKAKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + K A +++ Sbjct: 75 IIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVN 134 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++ VP Y++ N +I L + + LVVE+YSR Sbjct: 135 LSQKYKVPNYLTFNFFEKRGFVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|37683566|gb|AAQ98834.1| small ribosomal protein 4 [Pogonatum semipellucidum] Length = 174 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G L+ LE RLD I++ Sbjct: 11 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSPGQILLQLLEMRLDNIIF 69 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 + PTI ARQ V+H+H+LVN VNI SYRCK D I +K + K A + + ++ Sbjct: 70 QLGMAPTIPGARQLVSHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQAIIAKNIDFSQ 129 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 130 KYKIPNHLTFNSLEKKGLVNQI---LDRELIGLKINELLVVEYYSR 172 >gi|320455022|dbj|BAJ65658.1| small ribosomal protein 4 [Metzgeria americana] Length = 188 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 8/195 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ S + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKLKSSS---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P ++ + + + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175 Query: 187 KDVPYPVIMQPNLVV 201 + + LVV Sbjct: 176 --EWIDLKINELLVV 188 >gi|305672311|gb|ADM63579.1| ribosomal protein S4 [Griselinia littoralis] Length = 173 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + D +P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHDELPKHLTLDPFQYKGLVNQIIDS 172 >gi|184128027|gb|ACC67913.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 176 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD Sbjct: 7 QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 65 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 66 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 125 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++ + + RI + + + LVVE+YSR Sbjct: 126 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 174 >gi|153816224|ref|ZP_01968892.1| hypothetical protein RUMTOR_02473 [Ruminococcus torques ATCC 27756] gi|145846407|gb|EDK23325.1| hypothetical protein RUMTOR_02473 [Ruminococcus torques ATCC 27756] Length = 181 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 +R K S +GLQLR KQK K YG + EK FR+ + +A + G T NL+ LESRLD Sbjct: 17 KRANRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKAKQMEGMTGENLMRILESRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R T ARQ V+H+HVLVNG+ VNI SY K GD IE+K+ K + + Sbjct: 76 VIFRMGLARTRKEARQIVDHKHVLVNGKQVNIPSYLVKAGDTIEIKENKKGSQRYKDILE 135 Query: 159 LAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + VPE++ V+ +N+ + +P+ V + L+VE YS+ Sbjct: 136 ATGSNMVPEWLDVDAENLKGSVKELPAR---EAIDVPVDEMLIVELYSK 181 >gi|49182762|gb|AAT57843.1| small ribosomal protein [Monoclea sp. Shaw 10151] Length = 187 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ + Y ++ K S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTTKTLKSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RL+ I++R V T+ ARQ VNHRH+L+N V+I SY C Sbjct: 57 IARKAKGSTGQVLLQLLEMRLNNILFRLGMVLTVPGARQLVNHRHILINNNMVDIPSYNC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K DVI +K + K + + + ++ +P ++S + + ++ + Sbjct: 117 KPKDVITIKDRPKSQSIITKNLNSFQKSKIPNHLSFDLMQVKGLVNQMIDR---EWILLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|289599919|gb|ADD12910.1| ribosomal protein S4 [Hibbertia fasciculata] Length = 163 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSSHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+Y++++ +I S + + LVVE+YSR Sbjct: 121 ELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161 >gi|162415130|gb|ABX89139.1| ribosomal protein S4 [Barbula unguiculata] Length = 187 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 26 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 84 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + ++ Sbjct: 85 GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRQKSQVMITKNVDFFQKS 144 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 145 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 185 >gi|254995581|emb|CAO82749.1| ribosomal protein S4 [Lycopodium obscurum] Length = 172 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 6 STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + + + A + + ++ Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRPESRAIIAKNNK 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ VP ++++ I + + LVVE+YSR Sbjct: 125 FSQTYKVPNHLTLQSLQNKGLVNEIIDR---ESIDLNINELLVVEYYSR 170 >gi|58293907|gb|AAW69900.1| small ribosomal protein 4 [Codonoblepharon pungens] Length = 189 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+ S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLRVLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K V + + +P ++ N +I L Sbjct: 117 RCKPKDSITIKNRKKSQDIVAKNIDFYPKSKIPNHLIYNSLEKKGFVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|320455048|dbj|BAJ65671.1| small ribosomal protein 4 [Metzgeria sp. Tsubota s.n.] Length = 187 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISXYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCELGDIITIKNQKRYRSILMETLNSVQKPGIPNHLAFDSTKFIGSVNQMINR- 175 Query: 187 KDVPYPVIMQPNLV 200 + + LV Sbjct: 176 --EWIDLKINELLV 187 >gi|33413237|emb|CAD86754.1| ribosomal protein small subunit 4 [Leptodontium flexifolium] Length = 180 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 14 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGLILLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + Sbjct: 73 IIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDCITINDRKKSQIMITKNID 132 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 133 FSQKSKIPHHLAFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 178 >gi|146261583|gb|ABQ15101.1| ribosomal protein S4 [Rhodoleia championii] Length = 163 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ + G ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYXIRLEEKQKLRFHXG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVNGR V+I SYRCK D+I + + K A + + Sbjct: 61 GMASTIPGARQLVNHRHILVNGRPVDIPSYRCKPRDIITARDEQKSRALIQNYIDSSPHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161 >gi|78369609|gb|ABB43034.1| ribosomal protein 4 [Syrrhopodon mauritianus] Length = 182 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKTKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I+++ PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K + + Sbjct: 72 LDNIIFQLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIGK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P +++ N +I L + + LVVE+YSR Sbjct: 132 NVNFSPKYKIPSHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|14090480|gb|AAK53525.1| small ribosomal protein 4 [Dicnemon calycinum] Length = 182 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A ++G T L+ LE R Sbjct: 13 INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAREAKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 D +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + + A +++ Sbjct: 72 SDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQESQAMIIK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ VP +++ + +I L + + LVVE+YSR Sbjct: 132 NIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQKSIGLKINELLVVEYYSR 180 >gi|67035857|gb|AAY62855.1| small ribosomal protein subunit 4 [Paranapiacabaea paulista] Length = 184 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 8/191 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P S + K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYMVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + + ++ +P +++ N +I L + Sbjct: 117 KPQDFITIKNQHKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDLK 173 Query: 195 MQPNLVVEFYS 205 + LVVE+YS Sbjct: 174 INELLVVEYYS 184 >gi|63101087|gb|AAY33168.1| small ribosomal protein 4 [Lopidium concinnum] Length = 186 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 7/190 (3%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 KS + ++ K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 57 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V+I SYRCK Sbjct: 58 RKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSYRCKP 117 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I +K K K + + + + ++ + +++ + +I L + + Sbjct: 118 QDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI---LDRESIGLKIN 174 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 175 ELLVVEYYSR 184 >gi|284468535|gb|ADB90328.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906411|gb|ADT61778.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 183 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 AKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 FITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|51860497|gb|AAU11385.1| ribosomal protein small subunit 4 [Ephedra sinica] gi|51860527|gb|AAU11400.1| ribosomal protein small subunit 4 [Ephedra coryi] gi|51860541|gb|AAU11407.1| ribosomal protein small subunit 4 [Ephedra triandra] gi|51860563|gb|AAU11418.1| ribosomal protein small subunit 4 [Ephedra altissima var. algerica] gi|51860579|gb|AAU11426.1| ribosomal protein small subunit 4 [Ephedra major subsp. procera] Length = 200 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P + +H R K S + + L+ KQK++ +YG + Sbjct: 1 PRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 TERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNH 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFV 180 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 HIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVN 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 KIIDTKD---LQLKIKEMLVIEYYSR 198 >gi|3914870|sp|O36057|RR4_TIGSP RecName: Full=30S ribosomal protein S4, chloroplastic gi|2293099|emb|CAA92548.1| ribosomal protein S4 [Tigridia sp. 'Lejeune 1997'] gi|17154477|emb|CAC83915.1| ribosomal protein S4 [Calydorea pallens] gi|17154607|emb|CAC83913.1| ribosomal protein S4 [Eleutherine latifolia] Length = 182 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|77019183|emb|CAH60197.1| chloroplast 30S ribosomal protein S4 [Grimmia longirostris] Length = 177 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 8 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD ++++ PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + + A +++ Sbjct: 67 LDNVIFQLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQESQAMIIK 126 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 127 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 175 >gi|320455042|dbj|BAJ65668.1| small ribosomal protein 4 [Metzgeria limbatosetosa] Length = 187 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTLKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P ++ + ++ + R+ + Sbjct: 117 VDIPSYNCELGDIIAIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSVNRMINR- 175 Query: 187 KDVPYPVIMQPNLV 200 + + LV Sbjct: 176 --EWIDLKINELLV 187 >gi|125662710|gb|ABN50305.1| small ribosomal protein 4 [Ephedra intermedia] Length = 199 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 12/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+ K P + G R K S + + L+ KQK++ +YG ++E Sbjct: 1 RCKIIRRLKTLPGLTSKRPKYKKR---GHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 57 RQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRI 182 V+I SYRCK D+I +K K + + + VP Y++ N +I Sbjct: 117 VDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + ++ LV+E+YSR Sbjct: 177 IDTKD---LQLKIKEMLVIEYYSR 197 >gi|14090432|gb|AAK53501.1| small ribosomal protein 4 [Syrrhopodon leprieurii] Length = 182 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIIK 131 Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P ++ N +I L + + LVVE+YSR Sbjct: 132 NTNFFSKHKIPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|14090426|gb|AAK53498.1| small ribosomal protein 4 [Mitthyridium fasciculatum] Length = 182 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131 Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ ++ P +++ N +I L + + LVVE+YSR Sbjct: 132 NTKFFSKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|73476074|emb|CAE45346.1| ribosomal protein S4 [Dierama robustum] Length = 182 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 10/190 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V Sbjct: 56 QLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGGIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSL 186 +I SYRCK D+I K K + A + + ++P +++V+ +I S Sbjct: 116 DIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHREELPNHLTVDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|74273129|gb|ABA01264.1| ribosomal protein S4 [Passiflora pohlii] Length = 186 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFSRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 170 INEFLVVEYYSR 181 >gi|51860507|gb|AAU11390.1| ribosomal protein small subunit 4 [Ephedra nevadensis] Length = 200 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K P + +H R K S + + L+ KQK++ +YG + Sbjct: 1 PRFKIIRRLKTLPGLTSKGPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 TERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNH 115 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFV 180 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 HIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVN 175 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 KIIDTKD---LQLKIKEMLVIEYYSR 198 >gi|293633975|gb|ADE60367.1| ribosomal protein subunit 4 [Dawsonia beccarii] Length = 182 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + K +++ ++ Sbjct: 78 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIVKNIDFSQ 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ NH +I L + + LVVE+YSR Sbjct: 138 KYKIPNHLIFNHLERKGLVNQI---LDRESIGLKINELLVVEYYSR 180 >gi|330430072|gb|AEC21406.1| 30S ribosomal protein S4 [Pusillimonas sp. T7-7] Length = 154 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 5/158 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QLR KQK+K+ YG + EK+FR F EA+R RG+T LI LESRLD +VYR F T Sbjct: 1 MQLREKQKLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTR 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168 ARQ VNHR + +NG + +I S K GDVI +++K+K + E+ LA + +P+++ Sbjct: 60 AEARQLVNHRAIELNGHTADIASMLVKAGDVISIREKAKAQLRIRESLDLATGQGLPQWV 119 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+ + + TF + P + ++VVE YSR Sbjct: 120 EVDTNKLAGTFKQAPDRAD---VARDVNESMVVELYSR 154 >gi|289599931|gb|ADD12916.1| ribosomal protein S4 [Hibbertia salicifolia] Length = 163 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAER 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRVLIQNYLDSFSHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161 >gi|289599872|gb|ADD12887.1| ribosomal protein S4 [Dillenia hookeri] Length = 166 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 93/168 (55%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I Sbjct: 1 SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNI 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVN R V+I SYRCK D++ VK + K A + Sbjct: 60 LFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDS 119 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SPHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 164 >gi|162415112|gb|ABX89130.1| ribosomal protein S4 [Aloina rigida] Length = 189 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 28 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 86 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + +++ Sbjct: 87 GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 146 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 147 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 187 >gi|162415080|gb|ABX89114.1| ribosomal protein S4 [Tortula atrovirens] Length = 187 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 26 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 84 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYRCK D I + + K + + ++ Sbjct: 85 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMINKNVDFYQKS 144 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 145 KIPNHLTFNSLEKKGLINQI---LDQESIGLNINELLVVEYYSR 185 >gi|17154471|emb|CAC83794.1| ribosomal protein S4 [Anomatheca laxa] Length = 183 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRT----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|117306744|emb|CAH73340.1| ribosomal protein S4 [Lepyrodon lagurus] Length = 180 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 8/187 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T + E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 AKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A + + + ++ +P +++ + +I L + + Sbjct: 117 FITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYS 205 LVVE+YS Sbjct: 174 LVVEYYS 180 >gi|3098246|gb|AAC15571.1| small ribosomal protein 4 [Rhizogonium lindigii] Length = 184 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +S K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 PGLTNKIPQLKSNSISQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARK 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 58 AKGSTGEVLLQLLEMRLDNVIFRLGMAPTISGARQLVNHRHILVNDHIVDIPSYRCKPQD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K + + ++ +P +++ N +I L + + Sbjct: 118 FIIIKDQQKYQTIISKNINFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIGLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|42556518|gb|AAS19854.1| small ribosomal protein 4 [Wiesnerella sp. He-Nygren 777] Length = 177 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 8 INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R TI ARQ VNHRH+L+N +V+I SY CK DVI +K +SK + + + Sbjct: 67 LDNIIFRLGMTSTIPGARQLVNHRHILINNNTVDIPSYNCKPKDVITIKDRSKSQSIITK 126 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ + + +I + + LVVE+YSR Sbjct: 127 NLNSFQKQKIPNHLAFDLMQIKGIVNQIIDR---EWISLKINELLVVEYYSR 175 >gi|184127933|gb|ACC67866.1| ribosomal protein small subunit 4 [Christensenia aesculifolia] Length = 186 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 16 QSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PT AARQ VNHRH+LVN R VNI SYRCK D+I V+ ++ V + + Sbjct: 75 ILFRLGMSPTTPAARQLVNHRHILVNNRLVNIPSYRCKPKDIISVRDQTNSQILVKKNLE 134 Query: 159 LAERD-VPEYISV----NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE++++ +++ RI + + + LVVE+YSR Sbjct: 135 SLNKDQIPEHLTLSSLDDNEKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 184 >gi|14090420|gb|AAK53495.1| small ribosomal protein 4 [Mitthyridium obtusifolium] Length = 182 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQILLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNSIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + P +++ N +I L + + LVVE+YSR Sbjct: 132 NTKFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|162415126|gb|ABX89137.1| ribosomal protein S4 [Didymodon nigrescens] Length = 188 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 27 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 85 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + +++ Sbjct: 86 GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNVDFSQKS 145 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 146 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186 >gi|184128011|gb|ACC67905.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 175 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD Sbjct: 6 QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 65 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 124 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++ + + RI + + + LVVE+YSR Sbjct: 125 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 173 >gi|32401761|gb|AAP80869.1| small ribosomal protein 4 [Pseudolarix kaempferi] Length = 190 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K P + + K S + ++ KQK++ +YG ++E++ Sbjct: 2 RRLKTLPGLTXKRPKHRNDSI----NRSSSRKISQYRIRPXEKQKLRFHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE R D I++R PTI ARQ VNH H+ VN V+I S Sbjct: 57 YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK DVI ++ + + A + + L +RD +P +++ + +I Sbjct: 117 YPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFHSLQYKGLINQIIDLN---GI 173 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 TLKINELLVVEYYSR 188 >gi|51860581|gb|AAU11427.1| ribosomal protein small subunit 4 [Ephedra major subsp. procera] Length = 201 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 14/207 (6%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64 + KI R + K P + +H R K S + + L+ KQK++ +YG Sbjct: 1 GPRFKIIRXLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 55 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 115 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179 V+I SYRCK D+I +K K + + + VP Y++ N Sbjct: 116 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + ++ LV+E+YSR Sbjct: 176 NKIIDTKD---LQLKIKEMLVIEYYSR 199 >gi|42556412|gb|AAS19801.1| small ribosomal protein 4 [Frullania tamarisci] Length = 191 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + + K S + L KQK++ +YG ++EK+ Sbjct: 1 IRRLDMLPGLSNKTL---KPKSISIDRSMSNKKISQYRYSLEEKQKLRFHYG-LTEKQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +G T LI LE RLD I++ PTI ARQ VNH+H ++N +VNI Sbjct: 57 KYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY C+ GD+ ++ + K + + ++ ++P +++ + + + + + Sbjct: 117 SYNCELGDMYTIRNRQKSKSIITRNMNSFQKLEIPNHLTFDSTQLRGSINQ---RIDCNS 173 Query: 191 YPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INFKINELLVVEYYSR 189 >gi|74273117|gb|ABA01258.1| ribosomal protein S4 [Passiflora helleri] Length = 183 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKIYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|162415114|gb|ABX89131.1| ribosomal protein S4 [Aloina obliquifolia] Length = 188 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 27 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 85 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + +++ Sbjct: 86 GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 145 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 146 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186 >gi|184128003|gb|ACC67901.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 177 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD Sbjct: 8 QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 66 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 67 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 126 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++ + + RI + + + LVVE+YSR Sbjct: 127 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 175 >gi|184128069|gb|ACC67934.1| ribosomal protein small subunit 4 [Archangiopteris itoi] Length = 183 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S +G++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD Sbjct: 14 PSASKKISQYGIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 73 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 132 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++ + + RI + + + LVVE+YSR Sbjct: 133 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 181 >gi|184128005|gb|ACC67902.1| ribosomal protein small subunit 4 [Angiopteris evecta] gi|184128023|gb|ACC67911.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 181 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD Sbjct: 12 QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 71 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 130 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++ + + RI + + + LVVE+YSR Sbjct: 131 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 179 >gi|74273207|gb|ABA01303.1| ribosomal protein S4 [Passiflora sanguinolenta] Length = 185 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRAKLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|37992507|gb|AAR06432.1| small ribosomal protein 4 [Duthiella formosa] Length = 188 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K+P S ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 LGTLPGLTNKTPQLKSSS---INQSTXNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYV 56 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + A +++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYR Sbjct: 57 RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPSYR 116 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D I +K + K + + + ++ +P +++ + +I L + Sbjct: 117 CKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173 Query: 194 IMQPNLVVEFYS 205 + LVV +YS Sbjct: 174 KINELLVVXYYS 185 >gi|293633977|gb|ADE60368.1| ribosomal protein subunit 4 [Dawsonia superba] Length = 177 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 14 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 72 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + K +++ ++ Sbjct: 73 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIVKNIDFSQ 132 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ NH +I L + + LVVE+YSR Sbjct: 133 KYKIPNHLIFNHLERKGLVNQI---LDRESIGLKINELLVVEYYSR 175 >gi|63101025|gb|AAY33137.1| small ribosomal protein 4 [Schoenobryum concavifolium] Length = 176 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 7 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K A + + Sbjct: 66 LDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSEAIISK 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 126 NIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDCESIGLKINELLVVEYYSR 174 >gi|14090444|gb|AAK53507.1| small ribosomal protein 4 [Calymperes palisotii] Length = 182 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + + A +++G T L+ LE RLD I++R Sbjct: 21 KISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SY+CK D I +K K +++ + + Sbjct: 80 GIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDHQKYQPMMVKNINFSPKY 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 140 KIPSHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|3098250|gb|AAC15573.1| small ribosomal protein 4 [Spiridens reinwardtii] Length = 179 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 10 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMR 68 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K + + Sbjct: 69 LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQTIISK 128 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ + +I L + + LVVE+YSR Sbjct: 129 NIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIGLKINELLVVEYYSR 177 >gi|15894757|ref|NP_348106.1| 30S ribosomal protein S4 [Clostridium acetobutylicum ATCC 824] gi|26399604|sp|Q97J08|RS4B_CLOAB RecName: Full=Putative 30S ribosomal protein S4 B gi|15024424|gb|AAK79446.1|AE007659_1 Ribosomal protein S4 [Clostridium acetobutylicum ATCC 824] gi|325508895|gb|ADZ20531.1| 30S ribosomal protein S4 [Clostridium acetobutylicum EA 2018] Length = 192 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 15/206 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + K+ R +G N++G PK+ L+ ++ K S +G QL KQK++ Sbjct: 1 MARFMGPRFKLARHLGVNVFGHPKA----------LNRGVKQHKLSEYGEQLLEKQKLRA 50 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YYG + EK+F+ I A +S+ + L+ LE RLD +VYR F T+ ARQ V+H H Sbjct: 51 YYGVL-EKQFKKIVFNALKSKEKSEDILVQSLERRLDNLVYRLGFGSTLREARQMVSHGH 109 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 +LVNG+ V+I SY+ GD + ++ KS+++ + V YI + ++ + Sbjct: 110 ILVNGQKVDIPSYKVNIGDEVSLRSKSRKIQTYASNFTTIIPAV-TYIEKDTESFSGRLI 168 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P K V PV+++ + V+EFYS+ Sbjct: 169 RLP---KSVEVPVMVKYSKVLEFYSK 191 >gi|74273133|gb|ABA01266.1| ribosomal protein S4 [Passiflora rovirosae] Length = 183 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ RD +P ++ + +I S + Sbjct: 113 KPRDLITVKNEQKSKDMIKKSLDSFPRDKLPTHLILYPQKYKGLVNQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|293611998|gb|ADE48443.1| ribosomal protein 4 [Encephalartos hildebrandtii] gi|293612004|gb|ADE48446.1| ribosomal protein 4 [Encephalartos villosus] Length = 166 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 1 SSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNT 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R PTI ARQ VNHRH+LVN R V+I SYRCK DVI V+ + K A + + L Sbjct: 60 IFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNIDL 119 Query: 160 AERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++D +P +++++ +I S + + LVVE+YSR Sbjct: 120 SQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 164 >gi|14090430|gb|AAK53500.1| small ribosomal protein 4 [Syrrhopodon tortilis] Length = 182 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIIK 131 Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P ++ N +I L + + LVVE+YSR Sbjct: 132 NTNFFSKHKTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|293611980|gb|ADE48434.1| ribosomal protein 4 [Cycas wadei] Length = 181 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 9/187 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P +R+ R+ S + ++ KQK++ +YG ++E++ + A R+ Sbjct: 1 LTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGRA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK DV Sbjct: 56 KGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 115 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I ++ + + A + + L+++D +P +++++ +I S + + L Sbjct: 116 ITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK---WISLKINELL 172 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 173 VVEYYSR 179 >gi|81295643|gb|ABB70115.1| ribosomal protein subunit 4 [Ombronesus stuvensis] Length = 185 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 LPGLTNKILQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T + LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 58 KTKGSTGEVSLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQ 117 Query: 139 DVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I ++ K + + + + ++P +++ + +I + + Sbjct: 118 DFIIIENKKNYEVVINKNTDFYPKSEIPNHLTYSSLEKKGLVNKIXDR---ESIGLKINE 174 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 175 LLVVEYYSR 183 >gi|74273113|gb|ABA01256.1| ribosomal protein S4 [Passiflora capsularis] Length = 185 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R +P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRAKLPTHLILYPQKYKGLVNQIIDSK---CVGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INELLVIEYYSR 181 >gi|29422389|gb|AAO84590.1| small ribosomal protein 4 [Philonotis bartramioides] Length = 161 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S + ++L KQK + +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 1 ISQYRIRLEEKQKXRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-D 163 PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K A + + ++ Sbjct: 60 MAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYK 119 Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 120 IPNHLTYNSLENKGLVNQI---LDRESIGLKINELLVVEYYSR 159 >gi|63191669|gb|AAY34796.1| small ribosomal protein subunit 4 [Pseudopterobryum tenuicuspis] Length = 181 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 5/185 (2%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + +I RR+G K+P + ++ K S + ++L KQK++ +YG Sbjct: 1 YRGPRVRIIRRLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I+E++ + + A +++G T L+ E R D +++R PTI ARQ VNHRH+LV Sbjct: 58 -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 N V+I SYRCK D+I +K + K +++ + ++ +P +++ + +I Sbjct: 117 NDCIVDIPSYRCKPQDLITIKDQRKSETIIIKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176 Query: 183 PSSLK 187 Sbjct: 177 LXRES 181 >gi|184127993|gb|ACC67896.1| ribosomal protein small subunit 4 [Marattia purpurascens] Length = 189 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + ++ + K K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 LPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAG 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194 D+I V+ ++ V + + +D +PE+++++ + RI + + Sbjct: 119 DIISVRDQTNSRILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|29422409|gb|AAO84600.1| small ribosomal protein 4 [Breutelia tomentosa] Length = 184 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 5/184 (2%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGAFPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGGVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R V+I SYRCK D I +K + K A + + + ++ +P +++ N +I Sbjct: 117 DRIVDIPSYRCKPQDFITIKDQKKSQAIISKNIEFYQKYKIPAHLTYNSLENKGXVNQIL 176 Query: 184 SSLK 187 Sbjct: 177 XRES 180 >gi|184127981|gb|ACC67890.1| ribosomal protein small subunit 4 [Marattia attenuata] Length = 176 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 7 QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 65 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 66 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 125 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++++ + RI + + + LVVE+YSR Sbjct: 126 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 174 >gi|37683574|gb|AAQ98838.1| small ribosomal protein 4 [Pogonatum brachyphyllum] Length = 171 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 8 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 66 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R TI ARQ VNH+H+LVN VNI SYRCK D I +K + + + ++ Sbjct: 67 RLGMAQTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQESQDISAKNIDFSQ 126 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N +I L + + LVVE+YSR Sbjct: 127 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 169 >gi|289599876|gb|ADD12889.1| ribosomal protein S4 [Dillenia parkinsonii] Length = 165 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D++ VK + K A + + Sbjct: 60 FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 163 >gi|184128015|gb|ACC67907.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 182 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD Sbjct: 13 QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 72 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 131 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++ + + RI + + + LVVE+YSR Sbjct: 132 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 180 >gi|74273143|gb|ABA01271.1| ribosomal protein S4 [Passiflora trifasciata] Length = 185 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGQTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INEFLVIEYYSR 181 >gi|289599929|gb|ADD12915.1| ribosomal protein S4 [Hibbertia microphylla] Length = 166 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I Sbjct: 1 SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNI 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + Sbjct: 60 LFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++P++++++ +I S + + LVVE+YSR Sbjct: 120 SPHEELPKHLTLHPFQYKGLINQIIDSK---GIGLKINELLVVEYYSR 164 >gi|29422369|gb|AAO84580.1| small ribosomal protein 4 [Anacolia menziesii] Length = 180 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRXHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K A + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N +I L + + LVVE+YSR Sbjct: 130 NIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|92417441|gb|ABE76816.1| ribosomal protein subunit 4 [Equisetum fluviatile] Length = 192 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 NL G V ++ + Q + K S + ++L AKQ+++ YG ++E++ + + A Sbjct: 2 NLPGLTNKLVESKKNQASGNDQSNQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIA 60 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 ++G T L+ LE RLD I++R VPTI +ARQ +NHRH+LVN R V+I S+ CK Sbjct: 61 RCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSFHCKP 120 Query: 138 GDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193 D+I + + + + + A+ +P+++++ + + + Sbjct: 121 KDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEQKKPKGFVNYLINR---ESIGL 177 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 178 KINELLVVEYYSR 190 >gi|162415092|gb|ABX89120.1| ribosomal protein S4 [Didymodon vinealis] Length = 189 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 28 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 86 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + +++ Sbjct: 87 GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNVGFSQKS 146 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 147 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 187 >gi|14090424|gb|AAK53497.1| small ribosomal protein 4 [Mitthyridium jungquilianum] Length = 182 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + +L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRXRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + P +++ N +I L + + LVVE+YSR Sbjct: 132 NTKFSPKHKTPTHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|42556468|gb|AAS19829.1| small ribosomal protein 4 [Noteroclada confluens] Length = 191 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRPGTLPGLTSKTPGSKVGSSD---RSTSNKKISQYRIRLEEKQKLRLHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I Sbjct: 57 KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHVSINDHIIDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GD+I + + K + + L + ++P +++ + + + +I Sbjct: 117 SYNCKPGDIITINTREKFRLVNWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IYLKINELLVVEYYSR 189 >gi|32879557|emb|CAE11889.1| ribosomal protein S4 [Xenoscapa fistulosa] Length = 182 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 10/190 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSL 186 +I SYRCK D+I K + A + + + ++P +++++ +I S Sbjct: 116 DIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQGELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---SIGLKIN 182 >gi|284468543|gb|ADB90332.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|284468545|gb|ADB90333.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|284468547|gb|ADB90334.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 181 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 12 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 70 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 71 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 130 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 131 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 179 >gi|33413259|emb|CAD86764.1| ribosomal protein small subunit 4 [Helicophyllum torquatum] Length = 181 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ YYG I+E++ + + A +++G T L+ LE R Sbjct: 12 INQSTSNKKISQYRIRLEEKQKLRFYYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 70 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K + + Sbjct: 71 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRVVDIPSYRCKPQDFITIKNRQKSQVVISK 130 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N +I L + + LVVE+YSR Sbjct: 131 NIDFYQKFKIPNHLTYNSLENKGLVNQI---LNRESIGLKINELLVVEYYSR 179 >gi|73476076|emb|CAE45347.1| ribosomal protein S4 [Melasphaerula ramosa] Length = 182 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 10/190 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G K P + L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 FKKIRRLGALPGLTSKRPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V Sbjct: 56 QLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGGIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSL 186 +I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 DIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|184128021|gb|ACC67910.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 186 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 10/190 (5%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+ + ++ Q K S + ++L AKQ+++ +G ++E++ + A ++ Sbjct: 1 LTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+ Sbjct: 58 KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 117 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196 I V+ ++ V + + +D +PE+++ + + RI + + + Sbjct: 118 ISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDIN 174 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 175 ELLVVEYYSR 184 >gi|116010525|emb|CAL37369.1| ribosomal protein S4 [Sabal minor] Length = 182 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK+ +YG ++E Sbjct: 1 RFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLHFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P++++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|33413159|emb|CAD86716.1| ribosomal protein small subunit 4 [Grimmia calyptrata] Length = 183 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I++++ + + A +++G T L+ LE R Sbjct: 14 INQSTSNKKISQYRIRLEKKQKLRFHYG-ITKRQLLNYVRIARKAKGSTGQVLLQLLEMR 72 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 73 LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 132 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 133 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 181 >gi|314906621|gb|ADT61830.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] Length = 177 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 8 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 67 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 126 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 127 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 175 >gi|305672359|gb|ADM63603.1| ribosomal protein S4 [Diervilla sessilifolia] Length = 173 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K+P + G GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKTPRD----GSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + K A + + + R ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDKQNSRALIQNSLDSSPREELPKHLTLQPFQYKGLVNQIIDS 172 >gi|14090506|gb|AAK53538.1| small ribosomal protein 4 [Exodictyon incrassatum] Length = 183 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 5/177 (2%) Query: 31 SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLIS 90 S ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ Sbjct: 9 SKASSINQSISNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARKVKGSTGQVLLQ 67 Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150 LE RLD I++R PTI ARQ VNHRH+LVN R+VNI SY+CK D+I +K + K Sbjct: 68 LLEMRLDNIIFRFGLAPTIPGARQLVNHRHILVNNRTVNIPSYQCKPQDLITIKDQQKYQ 127 Query: 151 ASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ + + +P ++ N +I L + + LVVE+YSR Sbjct: 128 TMIVKNTNFFPKSKIPNHLIFNSAEKKGLVNQI---LDKESIGLKINELLVVEYYSR 181 >gi|108861128|gb|ABG21436.1| ribosomal protein small subunit 4 [Regnellidium diphyllum] Length = 195 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 11/199 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 RRLKSLPGLTGKASNPRETRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTERQLLR 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T + LE RLD +V++ PTI AARQ VNHRH+ VN R V++ S Sbjct: 58 YVRIARKTKGSTGQVPLQLLEMRLDNVVFQLGLAPTIPAARQLVNHRHISVNDRIVDVPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYIS---VNHDNMVATFVRIPSSLK 187 YRC+ D+I V+ + + + R +P+++S + + ++ + Sbjct: 118 YRCEPQDIITVRNRPTSCNVLKGGIFESSRGNQIPDHLSLSVLEGNKPRGLVNQVVNRD- 176 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 --SIDLNINELLVVEYYSR 193 >gi|124021090|gb|ABM88818.1| small ribosomal protein subunit 4 [Aneura pinguis] Length = 189 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 2 IRRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I Sbjct: 58 KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY CK GDVI + + K + + Q + +P +++ + V + +I Sbjct: 118 SYNCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 YLKINELLVVEYYSR 187 >gi|184127937|gb|ACC67868.1| ribosomal protein small subunit 4 [Marattia laevis] Length = 181 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 12 QSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ + V + + Sbjct: 71 IIFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQPNSQILVKKNLE 130 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++++ + RI + + + LVVE+YSR Sbjct: 131 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 179 >gi|32401771|gb|AAP80874.1| small ribosomal protein 4 [Cathaya argyrophylla] Length = 189 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 9/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR K P R L + K S + ++ KQK++ +YG ++E++ Sbjct: 1 RRPKTLPGLLXKDPKKERI----LSNRSSSRKISQYRIRSEEKQKLRFHYG-LTERQLLK 55 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I+++ PTI ARQ VNH H+ VN V+I S Sbjct: 56 YVRIARRAKGSTGQVLLQLLEMRLDNILFQLGMAPTIPGARQLVNHGHIQVNDHMVDIPS 115 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK DVI ++ + + A + + L +R+ +P +++ + +I S Sbjct: 116 YPCKPQDVITIRDQQRLRAIIRKNIDLFQRNKLPNHLTFHSLQCKGFINQIIDSK---WI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 SLKINELLVVEYYSR 187 >gi|17154619|emb|CAC83922.1| ribosomal protein S4 [Ferraria crispa] Length = 182 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 56 RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + A + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|305672377|gb|ADM63612.1| ribosomal protein S4 [Valeriana officinalis] Length = 173 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KSP+ S L Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKSPIKRSS----LRNQSSSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + +++P+++++ +I S Sbjct: 116 IPSYRCKPHDIITARDEQNSRALIQNSLDSSPHKELPKHLTLQSFQYKGLVNQIIDS 172 >gi|89147824|gb|ABD62760.1| ribosomal protein 4 [Cavicularia densa] Length = 177 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 L+ K S + ++L KQK++ +YG I+E++ + A +++G T L+ LE R Sbjct: 8 LNQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARKAKGSTGQILLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+L+N +V+I SY CK D+I +K + K + + + Sbjct: 67 LDNIIFRLGMAPTIPGARQLVNHRHILINNNTVDIPSYNCKPXDIITIKNRQKSQSIITK 126 Query: 156 ASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + + + + LVVE+YSR Sbjct: 127 NLKSFQKSQIPNHLTFDLMQFKGLVNQKIDR---EFINLKINELLVVEYYSR 175 >gi|67035943|gb|AAY62898.1| small ribosomal protein subunit 4 [Leptodon smithii] Length = 183 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+ S ++ K S + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 GLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 AKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K + + +L ++ +P +++ + +I L + + Sbjct: 117 FITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|184128025|gb|ACC67912.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 187 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 9/190 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G + ++ + Q K S + ++L AKQ+++ +G ++E++ + A ++ Sbjct: 1 GLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKA 58 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+ Sbjct: 59 KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 118 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196 I V+ ++ V + + +D +PE+++ + + RI + + Sbjct: 119 ISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGWDIN 175 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 176 ELLVVEYYSR 185 >gi|289599905|gb|ADD12903.1| ribosomal protein S4 [Hibbertia conspicua] Length = 163 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ER 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSLHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLALQPFQYKGLVNQIIDSK---WIGLKINELLVVEYYSR 161 >gi|90970054|gb|ABE02796.1| ribosomal protein S4 [Passiflora leptoclada] Length = 183 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRFGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INEFLVIEYYSR 181 >gi|320455028|dbj|BAJ65661.1| small ribosomal protein 4 [Metzgeria pubescens] Length = 187 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 8/194 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKLKSSY---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P ++ + + + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175 Query: 187 KDVPYPVIMQPNLV 200 + + LV Sbjct: 176 --EWIDLKINELLV 187 >gi|314906619|gb|ADT61829.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 176 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 7 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 66 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 125 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 126 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 174 >gi|314906409|gb|ADT61777.1| ribosomal protein subunit 4 [Scleropodium cespitans] gi|314906533|gb|ADT61787.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906535|gb|ADT61788.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906537|gb|ADT61789.1| ribosomal protein subunit 4 [Scleropodium cespitans] gi|314906541|gb|ADT61790.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906543|gb|ADT61791.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906545|gb|ADT61792.1| ribosomal protein subunit 4 [Scleropodium cespitans] gi|314906547|gb|ADT61793.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906549|gb|ADT61794.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906553|gb|ADT61796.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906555|gb|ADT61797.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906557|gb|ADT61798.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906559|gb|ADT61799.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906561|gb|ADT61800.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906563|gb|ADT61801.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906565|gb|ADT61802.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906567|gb|ADT61803.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906569|gb|ADT61804.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906571|gb|ADT61805.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906573|gb|ADT61806.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906577|gb|ADT61808.1| ribosomal protein subunit 4 [Scleropodium cespitans] gi|314906579|gb|ADT61809.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906581|gb|ADT61810.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906583|gb|ADT61811.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906585|gb|ADT61812.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906587|gb|ADT61813.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906589|gb|ADT61814.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906591|gb|ADT61815.1| ribosomal protein subunit 4 [Scleropodium cespitans] gi|314906593|gb|ADT61816.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906595|gb|ADT61817.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906597|gb|ADT61818.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906601|gb|ADT61820.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906603|gb|ADT61821.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906605|gb|ADT61822.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906607|gb|ADT61823.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906609|gb|ADT61824.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906611|gb|ADT61825.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906613|gb|ADT61826.1| ribosomal protein subunit 4 [Scleropodium julaceum] gi|314906615|gb|ADT61827.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906617|gb|ADT61828.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906623|gb|ADT61831.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906625|gb|ADT61832.1| ribosomal protein subunit 4 [Scleropodium cespitans] gi|314906627|gb|ADT61833.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906629|gb|ADT61834.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906631|gb|ADT61835.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906637|gb|ADT61837.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906641|gb|ADT61839.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] gi|314906645|gb|ADT61841.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906647|gb|ADT61842.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906649|gb|ADT61843.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906651|gb|ADT61844.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906653|gb|ADT61845.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906655|gb|ADT61846.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906657|gb|ADT61847.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906659|gb|ADT61848.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906661|gb|ADT61849.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906663|gb|ADT61850.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906665|gb|ADT61851.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906667|gb|ADT61852.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906669|gb|ADT61853.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906671|gb|ADT61854.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906673|gb|ADT61855.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906675|gb|ADT61856.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906677|gb|ADT61857.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906679|gb|ADT61858.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906681|gb|ADT61859.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906683|gb|ADT61860.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906685|gb|ADT61861.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906687|gb|ADT61862.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906690|gb|ADT61863.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906692|gb|ADT61864.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906694|gb|ADT61865.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906696|gb|ADT61866.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906698|gb|ADT61867.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906700|gb|ADT61868.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906702|gb|ADT61869.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906704|gb|ADT61870.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906706|gb|ADT61871.1| ribosomal protein subunit 4 [Scleropodium touretii] gi|314906708|gb|ADT61872.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)] gi|314906710|gb|ADT61873.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 180 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|184128055|gb|ACC67927.1| ribosomal protein small subunit 4 [Angiopteris lygodiifolia] Length = 186 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+ + ++ Q K S + ++L AKQ+++ +G ++E++ + A ++ Sbjct: 1 LTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+ Sbjct: 58 KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 117 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196 I V+ ++ V + + +D +PE+++++ + RI + + + Sbjct: 118 ISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLDIN 174 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 175 ELLVVEYYSR 184 >gi|108861100|gb|ABG21422.1| ribosomal protein small subunit 4 [Marsilea nashii] gi|108861114|gb|ABG21429.1| ribosomal protein small subunit 4 [Marsilea schelpeana] Length = 196 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+P S Q K S + ++L AKQ+++ YG ++E++ Sbjct: 1 IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ Sbjct: 58 RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186 SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 SYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---A 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 175 KRESMDLNINELLIVEYYSR 194 >gi|314906551|gb|ADT61795.1| ribosomal protein subunit 4 [Scleropodium californicum] gi|314906575|gb|ADT61807.1| ribosomal protein subunit 4 [Scleropodium californicum] gi|314906599|gb|ADT61819.1| ribosomal protein subunit 4 [Scleropodium californicum] Length = 180 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN +V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCTVDIPSYRCKPQDFITIKNQRKSETIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|29422365|gb|AAO84578.1| small ribosomal protein 4 [Breutelia polygastrica] Length = 180 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Query: 46 SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105 S + ++L QK++ +YG I+E++ + A +++G T L+ LE RLD +++R Sbjct: 21 SQYRIRLEENQKLRFHYG-ITERQLLNYDGIARKAKGSTGEVLLQLLEMRLDNVIFRLGM 79 Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164 PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K A + + ++ + Sbjct: 80 APTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKI 139 Query: 165 PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P +++ N +I L + + LVVE+YSR Sbjct: 140 PNHLTYNSLENKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|108861118|gb|ABG21431.1| ribosomal protein small subunit 4 [Marsilea vestita] Length = 196 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+P S Q K S + ++L AKQ+++ YG ++E++ Sbjct: 1 IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ Sbjct: 58 RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186 SYRC+ D+I ++ + + + R ++P+++S + + ++ Sbjct: 118 SYRCEPQDIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---A 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 175 KRESMDLNINELLIVEYYSR 194 >gi|77862519|gb|ABB04532.1| small ribosomal protein 4 [Conocephalum japonicum] Length = 181 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 7/185 (3%) Query: 23 PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82 + ++S +K S + ++L KQK++ +YG ++E++ + A +++G Sbjct: 1 TNKTLKSKSGYINQSISNKK--VSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKG 57 Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 T L+ LE RLD I++R PTI ARQ VNHRH+L+N +V+I SY CK D+I Sbjct: 58 STGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILINNITVDIPSYNCKPKDIIT 117 Query: 143 VKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201 +K + K + + + + ++ +P ++S + + +I + + LVV Sbjct: 118 IKDRQKSQSIITKNLKSFQKPKIPNHLSFDLIQIKGLVNQIIDR---EWIYLKINELLVV 174 Query: 202 EFYSR 206 E+YSR Sbjct: 175 EYYSR 179 >gi|37992449|gb|AAR06403.1| small ribosomal protein 4 [Camptochaete pulvinata] Length = 157 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 5/159 (3%) Query: 49 GLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108 ++L KQK++ +YG I+E++ + + A R++G T L+ E RLD +++R PT Sbjct: 1 RIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGEVLLQLPEMRLDNVIFRLGMAPT 59 Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEY 167 I ARQ VNHRH+LVN V+I SYRCK D I +K + K + + + ++ +P + Sbjct: 60 IPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNH 119 Query: 168 ISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ N +I L + + LVVE+YSR Sbjct: 120 LTYNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 155 >gi|27227943|gb|AAN85769.1| ribosomal protein subunit 4 [Bryum gemmiferum] Length = 164 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++ Sbjct: 1 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIF 59 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A + + L + Sbjct: 60 RLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQ 119 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P +++ N +I L + + LVVE+YSR Sbjct: 120 KYKTPNHLTYNFLKKKGLVNQI---LDRESIGLKINELLVVEYYSR 162 >gi|305672337|gb|ADM63592.1| ribosomal protein S4 [Cuttsia viburnea] Length = 173 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E + Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTEGQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + + +P +++++ A +I S Sbjct: 116 IPSYRCKPQDTITARDEQKSRALIQNSLDSSPHEKLPNHLTLHPFQYKALVNQIIDS 172 >gi|305672243|gb|ADM63545.1| ribosomal protein S4 [Cyphia decora] Length = 173 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KSP + G Q K S + L+L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKSPRD----GSDPRNQSGYGKKSQYRLRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I K + K A + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDTITAKDEQKSKALIQNSLDSFPHEELPKHLTLDPVQYKGLVNQIIDS 172 >gi|90970056|gb|ABE02797.1| ribosomal protein S4 [Passiflora micropetala] Length = 183 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INEFLVIEYYSR 181 >gi|305672237|gb|ADM63542.1| ribosomal protein S4 [Linnaea borealis] Length = 173 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P ++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPNHLTLQSFQYKGLVNQIIDS 172 >gi|78102627|gb|ABB21527.1| small ribosomal protein 4 [Plagiochila andina] Length = 183 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 8/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNH+H+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHKHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I + K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 --EWTNLKIN 183 >gi|117306756|emb|CAH73347.1| ribosomal protein S4 [Sematophyllum sp. Sg129] gi|117306758|emb|CAH73348.1| ribosomal protein S4 [Sematophyllum sp. Sg129] Length = 183 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 AKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K + + + ++ +P +++ + +I L + + Sbjct: 117 FITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLXNQI---LDRESIDLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|254995575|emb|CAO82746.1| ribosomal protein S4 [Lycopodium deuterodensum] Length = 172 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD Sbjct: 6 STPNKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + +S+ A + + ++ Sbjct: 65 IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRAIIAKNNK 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P ++++ +I + + LVVE+YSR Sbjct: 125 FSQTYKIPNHLTLYSLQNKGLVNKIIDR---ELIDLNINELLVVEYYSR 170 >gi|314906643|gb|ADT61840.1| ribosomal protein subunit 4 [Scleropodium cespitans] Length = 180 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|3098234|gb|AAC15565.1| small ribosomal protein 4 [Braithwaitea sulcata] Length = 184 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +S K S + ++L KQK++ +YG I E++ + + A + Sbjct: 1 PGLTNKTSQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYGII-ERQLLNYVRIARK 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 58 AKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A + + ++ +P +++ + +I L + + Sbjct: 118 FITIKNRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIGLKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|46811012|gb|AAT01824.1| small ribosomal protein 4 [Hattorianthus erimonus] Length = 180 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 49/166 (29%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K + + ++L KQK++ +YG ++E++ + A ++G T L+ LE RLD IV Sbjct: 17 NRKITQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARSAKGSTGQILLQLLEMRLDNIVS 75 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA- 160 R PTI ARQ VNHRH+++N +V+I SY C+ DVI ++ + + + L+ Sbjct: 76 RLGMAPTIPGARQLVNHRHIVINDSTVDIPSYSCEPRDVITIRDRQESRLIIARNMDLSQ 135 Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ER +P +++++ + + ++ + + L+VE++SR Sbjct: 136 ERKIPNHLTLDSTHFRGSINQVIDR---EWIDLKINELLIVEYHSR 178 >gi|74273147|gb|ABA01273.1| ribosomal protein S4 [Passiflora vespertilio] Length = 185 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP ++ R + S + ++L KQK++ +YG ++E++ + Sbjct: 1 GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRC Sbjct: 53 IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I VK + K + ++ R ++P ++ + +I S + Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169 Query: 195 MQPNLVVEFYSR 206 + LV+E+YSR Sbjct: 170 INEFLVIEYYSR 181 >gi|299008296|gb|ADJ00109.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008298|gb|ADJ00110.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008300|gb|ADJ00111.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008302|gb|ADJ00112.1| small ribosomal protein 4 [Radula lindenbergiana] Length = 184 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + + + K S + ++L KQK++ +YG ++EK+ + A Sbjct: 1 PGLSNKTL--KPKSISIDRSLSNKKISQYRIRLEEKQKLRFHYG-LTEKQLLKYVRIARN 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 +G T LI LE RLD I++ PTI ARQ VNH+H ++N +VNI SY C+ GD Sbjct: 58 IKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIPSYNCELGD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I V+ + K + + + L ++ ++P +++ + + + + + + Sbjct: 118 IITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDYNSINFKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|314906529|gb|ADT61785.1| ribosomal protein subunit 4 [Brachythecium frigidum] gi|314906531|gb|ADT61786.1| ribosomal protein subunit 4 [Brachythecium asperrimum] Length = 180 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T + LE R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVSLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIIDK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|108861112|gb|ABG21428.1| ribosomal protein small subunit 4 [Marsilea quadrifolia] Length = 196 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+P S Q K S + ++L AKQ+++ YG ++E++ Sbjct: 1 IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ Sbjct: 58 RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186 SYRC+ D+I V+ + + + R ++P+++S + + ++ Sbjct: 118 SYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---A 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 175 KRESMDLNINELLIVEYYSR 194 >gi|42556460|gb|AAS19825.1| small ribosomal protein 4 [Metzgeria conjugata] Length = 183 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+ + SY + K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTERQLLKYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N V+I SY C+ GD Sbjct: 57 TKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDIVDIPSYNCELGD 116 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I +K + + + ++E ++ +P ++ + ++ + R+ + + + Sbjct: 117 IITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSVNRMINR---EWIDLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|14090448|gb|AAK53509.1| small ribosomal protein 4 [Octoblepharum albidum] Length = 182 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + + A +++G T L+ LE RLD +++R Sbjct: 21 KVSQYRIRLEEKQKLRFHYG-LTEQQLLNYMRIARKAKGSTGQVLLQLLEMRLDNVIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHR++LVN VNI SYRCK DVI +K + +++ + ++ Sbjct: 80 GMAPTIPGARQLVNHRYILVNNCIVNIPSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKY 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++S N +I L + + LVVE+YSR Sbjct: 140 KIPNHLSFNALEKKGLVKQI---LDQEFVGLKINELLVVEYYSR 180 >gi|78102673|gb|ABB21550.1| small ribosomal protein 4 [Plagiochila hookeriana] Length = 172 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 5/176 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 V+I SY C+ GD+I ++ K K +++ + ++ +P +++ + + + ++ Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQM 172 >gi|46811016|gb|AAT01826.1| small ribosomal protein 4 [Hymenophyton leptopodum] Length = 176 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE RLD Sbjct: 7 STANKKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARRAKGSTGQILLQLLEMRLDN 65 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+R PTI ARQ VNHRH+ +N V+I SY CK DVI + + + Sbjct: 66 IVFRLGMAPTIPGARQLVNHRHIPINDDMVDIPSYNCKPEDVITTGNRRESRLIITRNIN 125 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ +P +++ + + ++ + + LVVE+YSR Sbjct: 126 LFQKQKIPNHLTFDSTQFRGSVNQMIDR---ECINLKINELLVVEYYSR 171 >gi|305672219|gb|ADM63533.1| ribosomal protein S4 [Abelia x grandiflora] Length = 173 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIIMARDEQNSRALIQNSLDSSPHEELPKHLTLQSFQYKGLVNQIIDS 172 >gi|305672193|gb|ADM63520.1| ribosomal protein S4 [Dipelta yunnanensis] gi|305672341|gb|ADM63594.1| ribosomal protein S4 [Kolkwitzia amabilis] gi|305672353|gb|ADM63600.1| ribosomal protein S4 [Centranthus ruber] Length = 173 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPKHLTLQSFQYKGLVNQIIDS 172 >gi|125662686|gb|ABN50293.1| small ribosomal protein 4 [Thujopsis dolabrata] Length = 203 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + KI R+ L G K N R P + KPS + ++L+ KQ+++ +YG Sbjct: 1 RGPRFKIINRLKT-LPGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQRLRFHYG- 57 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 + E++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 58 LPERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVN 117 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISV--NHDNMVATF 179 GR V+I SYRCK D+I +K+K + + + + ++D VP +++ A Sbjct: 118 GRIVDIPSYRCKPQDLISIKEKQGLINIINKNRDIFKKDNMRVPPHLNWINKKSQYSALV 177 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + + + LVVE+YSR Sbjct: 178 NKIIDNKR---IGLKINELLVVEYYSR 201 >gi|86438884|emb|CAJ55419.1| small ribosomal protein 4 [Plagiochila dependula] Length = 176 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 5/180 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+ + +Y + K S + ++L KQK Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKXXX 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD PTI ARQ VNHRH Sbjct: 58 HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTXXXXGMSPTIPGARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 + +N V+I SY C+ GD+I + K K + V + ++ +P ++ + + + Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176 >gi|314906413|gb|ADT61779.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 180 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|311223016|gb|ADP76590.1| small ribosomal protein 4 [Pellia neesiana] Length = 189 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 8/195 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+G K + S G +K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L LE RLD I++R PTI ARQ VNHRH+L+N +V+I Sbjct: 57 KYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDDTVDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY C+ DVI V + K+ + + VP +++ + + + Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---EFI 172 Query: 192 PVIMQPNLVVEFYSR 206 + + L VE+YSR Sbjct: 173 DLKINELLGVEYYSR 187 >gi|293612012|gb|ADE48450.1| ribosomal protein 4 [Macrozamia moorei] Length = 179 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%) Query: 25 SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 +R+ R+ S + ++L KQK++ +YG ++E++ + A R++G T Sbjct: 2 KRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGST 57 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L+ LE R D ++R PTI ARQ VNHRH+LVN R V+I YRCK DVI V+ Sbjct: 58 GQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPGYRCKPRDVITVR 117 Query: 145 QKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 + K A + + L+++D + +++++ +I S + + LVVE+ Sbjct: 118 DQQKSRAMIEKNIDLSQKDQMSNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEY 174 Query: 204 YSR 206 YSR Sbjct: 175 YSR 177 >gi|289599870|gb|ADD12886.1| ribosomal protein S4 [Dillenia alata] gi|289599881|gb|ADD12891.1| ribosomal protein S4 [Dillenia suffruticosa] Length = 163 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN R V+I SYRCK D++ VK + K A + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSSPHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 161 >gi|305672347|gb|ADM63597.1| ribosomal protein S4 [Acicarpha tribuloides] Length = 173 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P ++++ +I S Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172 >gi|162415104|gb|ABX89126.1| ribosomal protein S4 [Syntrichia norvegica] Length = 188 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 27 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 85 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SYRCK D I + + K + + +++ Sbjct: 86 SMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 145 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 146 KIPNHLTFNFLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186 >gi|32401759|gb|AAP80868.1| small ribosomal protein 4 [Stangeria eriopus] Length = 169 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 2 NQSSSRKISQYRVRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 60 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 ++R PTI ARQ VNHRH+LVN V+I SYRCK DVI V+ + + + + Sbjct: 61 NTIFRLGMAPTIPGARQLVNHRHILVNDCVVDIPSYRCKPLDVITVRNQQGLRSMIDKNL 120 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L+++D +P +++++ +I S + + LVVE+YSR Sbjct: 121 NLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKVNELLVVEYYSR 167 >gi|17154597|emb|CAC83837.1| ribosomal protein S4 [Ixia latifolia] Length = 183 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG +++ Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKKSQYRIRLEKKQKLRFHYG-LTK 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|289599879|gb|ADD12890.1| ribosomal protein S4 [Dillenia retusa] Length = 165 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D++ VK + K A + + Sbjct: 60 FRLGMAXTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 163 >gi|320455026|dbj|BAJ65660.1| small ribosomal protein 4 [Metzgeria kinabaluensis] Length = 187 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ S + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKLKSSS---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P ++ + + + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175 Query: 187 KDVPYPVIMQPNLV 200 + + LV Sbjct: 176 --EWIDLEINELLV 187 >gi|53830734|gb|AAU95216.1| small ribosomal protein 4 [Syrrhopodon banksii] gi|53830744|gb|AAU95221.1| small ribosomal protein 4 [Syrrhopodon banksii] gi|53830746|gb|AAU95222.1| small ribosomal protein 4 [Syrrhopodon banksii] gi|53830748|gb|AAU95223.1| small ribosomal protein 4 [Syrrhopodon banksii] gi|53830750|gb|AAU95224.1| small ribosomal protein 4 [Syrrhopodon borneensis] gi|53830752|gb|AAU95225.1| small ribosomal protein 4 [Syrrhopodon borneensis] gi|53830754|gb|AAU95226.1| small ribosomal protein 4 [Syrrhopodon borneensis] Length = 177 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD Sbjct: 11 STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ + Sbjct: 70 IIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFITIKDQQKYQTMIVKNTN 129 Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ P ++ N +I L + + LVVE+YSR Sbjct: 130 FFSKQKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175 >gi|49182694|gb|AAT57809.1| small ribosomal protein [Aneura mirabilis] gi|124021080|gb|ABM88813.1| small ribosomal protein subunit 4 [Aneura mirabilis] Length = 191 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+P K S + ++L KQK++ +YG ++E++ Sbjct: 1 IRRPGTLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I Sbjct: 57 KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GDVI + + K ++ ++P +++ + + + +I Sbjct: 117 SYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 173 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 IDLKINELLVVEYYSR 189 >gi|146261553|gb|ABQ15086.1| ribosomal protein S4 [Choristylis rhamnoides] Length = 162 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++ ++ + A +++G T L+ LE LD I++R Sbjct: 1 KRSQYRIRLXXKQKLRFHYG-LTXRQLLKYVRIAGKAKGSTGQVLLQLLEMXLDNIJFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNH H+LVNGR V+I SYRCK D+I + + K A + + Sbjct: 60 GMASTIPGARQLVNHXHILVNGRIVDIPSYRCKPRDIITARDEQKSRAXIQNYLDSSPHE 119 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I + + + LVVE+YSR Sbjct: 120 ELPKHLTLHPFQYKGLVNQIIDTK---WVGLKINELLVVEYYSR 160 >gi|116517480|gb|ABJ99094.1| ribosomal protein subunit 4 [Orthotrichum assimile] Length = 177 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD Sbjct: 11 STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H++VN R V+I SYRCK D I +K + K + + Sbjct: 70 IIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSYRCKPQDFITIKNRQKSQDIITKNID 129 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N +I + + LVVE+YSR Sbjct: 130 FNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIGLKINELLVVEYYSR 175 >gi|305672211|gb|ADM63529.1| ribosomal protein S4 [Alseuosmia macrophylla] Length = 173 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPLDTITARDEQKSRALIQNSLDSSPHEELPKHLTLHSFQYKGLVNQIIDS 172 >gi|162415122|gb|ABX89135.1| ribosomal protein S4 [Tortula laureri] Length = 186 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 5/163 (3%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S + ++L KQK++ +YG I+E + + + A +++G T L+ LE RLD +++R Sbjct: 26 ISQYRIRLEEKQKLRFHYG-ITEXQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLG 84 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-D 163 TI ARQ VNHRH+LVN VNI SYRCK D I + + K + + ++ Sbjct: 85 MAXTIPGARQLVNHRHILVNXXIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFXQKSK 144 Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 145 IPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 184 >gi|18027952|gb|AAL55900.1| ribosomal protein S4 [Syngramma quinata] Length = 191 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 2/189 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K + Q K S F ++L KQK++ YG ++E++ + A Sbjct: 3 LPGLTGKDKTSNSGDFRVASEQSASEKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 ++RG T L+ LE RLD I++R TI AARQ VNHRH+LVNG V+I SYRCK Sbjct: 62 RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGCIVDIPSYRCKP 121 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++++ V +A + +P++++++ + + + Sbjct: 122 KDIITIRKRPISHT-VAKAEFIGRDGIPDHLTLSFSKAGEQVGLVNHMANRESVDLEINE 180 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 181 LLVVEYYSR 189 >gi|305672259|gb|ADM63553.1| ribosomal protein S4 [Weigela hortensis] Length = 173 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P + G GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRPRD----GSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITPRDEQNSRALIQNSLDSSPHEELPKHLTLQPFQYKGLVNQIIDS 172 >gi|168704700|ref|ZP_02736977.1| 30S ribosomal protein S4 [Gemmata obscuriglobus UQM 2246] Length = 196 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 10/196 (5%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K DR G PK P++ + PG+HG RR Y G++LR KQK+K++YG + E Sbjct: 5 LKGDRCFG------PKCPIDKQKPPPGMHGLRRSKTSEY-GIRLREKQKLKRFYGVL-EA 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 +FR + A ++ G+T L+S LE RLD +V+R F +ARQ V+H H+LVNG Sbjct: 57 QFRRYYGLATKAVGNTGEQLLSILERRLDNVVHRLGFAVNRTSARQMVSHGHILVNGVKC 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV--NHDNMVATFVRIPSSL 186 +I S K GDVI+VK + L + +P+++ + D R P+ Sbjct: 117 DIASMLVKPGDVIKVKTRDSSLKMARDTLAKGTVRIPDFLELTGTQDQPEGRMNRTPTRQ 176 Query: 187 KDVPYPVIMQPNLVVE 202 ++ L++E Sbjct: 177 DVDERITDIREQLIIE 192 >gi|305672363|gb|ADM63605.1| ribosomal protein S4 [Nymphoides peltata] Length = 173 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K + + + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTITARDEQKSRSLIQNSIDSSPHDELPNHLTLHPFQYKGLVNQIIDS 172 >gi|162415116|gb|ABX89132.1| ribosomal protein S4 [Aloina cornifolia] Length = 188 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 27 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 85 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R V+I SYRCK D I + + K + + ++ Sbjct: 86 GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKSQDFITINDRKKSQVMITKNVDFFQKS 145 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 146 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186 >gi|124021082|gb|ABM88814.1| small ribosomal protein subunit 4 [Aneura mirabilis] Length = 192 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR G K+P K S + ++L KQK++ +YG ++E++ Sbjct: 2 IRRPGTLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I Sbjct: 58 KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GDVI + + K ++ ++P +++ + + + +I Sbjct: 118 SYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 174 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 IDLKINELLVVEYYSR 190 >gi|14090436|gb|AAK53503.1| small ribosomal protein 4 [Calymperes tahitense] Length = 182 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD I++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ + Sbjct: 78 RLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQKIIIKNVNFSP 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ N ++ L + + LVVE+YSR Sbjct: 138 KYKIPRHLTFNSVEKKGLVNQL---LDQESIGLKINELLVVEYYSR 180 >gi|16565353|gb|AAL26195.1|AF313588_1 small ribosomal protein 4 [Psilotum nudum] Length = 229 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 36/231 (15%) Query: 8 KHKIDRRIGENLWGR--------------------PKSPVNTRSYGPGLHG--------Q 39 + KI RR+ K + Q Sbjct: 1 RLKIIRRLNHLPGLTKKKLKLKKVESDQSKMESDQSKVESDQSKMESDQSKVESDQSISQ 60 Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S + L+L AKQ+++ YG ++E++ A ++RG T L+ LE RLD I Sbjct: 61 STSKKRSQYSLRLEAKQRLRFNYG-VTERQLLKYVCIAKKARGSTGQVLLQLLEMRLDNI 119 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R PTI ARQ VNHRH+LVN + V+I SYRCK D+I V+ K + +L Sbjct: 120 IFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSYRCKPNDIITVRDHQKSQELIKRNIKL 179 Query: 160 AE-RDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A+ ++P +++ + +I + + LVVE+YSR Sbjct: 180 AKIDEIPSHLNISYLEETKPKGFINKIVDRG---SIGLEINELLVVEYYSR 227 >gi|14090450|gb|AAK53510.1| small ribosomal protein 4 [Octoblepharum albidum] Length = 182 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + + A +++G T L+ LE RLD +++R Sbjct: 21 KVSQYRIRLEEKQKLRFHYG-LTEQQLLNYMRVARKTKGSTGQVLLQLLEMRLDNVIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI AARQ VNHR++LVN VNI SYRCK DVI +K + +++ + ++ Sbjct: 80 GMAPTIPAARQLVNHRYILVNNCIVNIPSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKY 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++S N +I L + + LVVE+YSR Sbjct: 140 KIPNHLSFNALEKKGLVKQI---LDQEFVGLKINELLVVEYYSR 180 >gi|22854717|gb|AAN09778.1| small ribosomal protein 4 [Didymodon paramicola] Length = 191 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 30 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 88 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R V I SYRCK D I + + K V + +++ Sbjct: 89 GMAPTIPGARQLVNHRHILVNNRIVGIPSYRCKPQDFITINNRKKSQVMVAKNVDFSQKS 148 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVVE+YSR Sbjct: 149 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 189 >gi|124021096|gb|ABM88821.1| small ribosomal protein subunit 4 [Aneura maxima] Length = 187 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 9/194 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLK 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I S Sbjct: 57 YVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 Y CK GDVI + + K + + Q + +P +++ + V + +I Sbjct: 117 YNCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WIY 171 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 172 LKINELLVVEYYSR 185 >gi|42794730|gb|AAS45760.1| Rps4 [Thibaudia tomentosa] Length = 211 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K F Q KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFVKKKKXNIXFVYQ--EKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E+ + + G T L+ LE R D I++R TI A Q V RH Sbjct: 59 HYG-LTERPLLKYVRFPGKXXGSTGQVLLQLLEMRXDNILFRWGRAXTIPGAXQLVTXRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR +I SYRC D+ ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRLKDIPSYRCNPRDIXTAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|46811048|gb|AAT01842.1| small ribosomal protein 4 [Riccia huebeneriana subsp. sullivantii] Length = 179 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++ Sbjct: 16 NKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIF 74 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+L+N +V+I SY CK D+I +K + K + + + + Sbjct: 75 RLGMAPTIPGARQLVNHQHILINNHTVDIPSYNCKPKDIITIKDRQKSKSIITKNLNFFQ 134 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ + + +I + + LVVE+YSR Sbjct: 135 KQKIPNHLNFDLIQIKGLINQIVDR---EWIYLKINELLVVEYYSR 177 >gi|14090422|gb|AAK53496.1| small ribosomal protein 4 [Mitthyridium constrictum] Length = 182 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ Sbjct: 72 LDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKSQDFITIKDQQKYQTMIVK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + P +++ N +I L + + LVVE+YSR Sbjct: 132 NTKFSPKHKTPNHLTFNSVEKKGLVNQI---LNQESIGLKINELLVVEYYSR 180 >gi|3914821|sp|O19986|RR4_ALOVE RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292737|emb|CAA92529.1| ribosomal protein S4 [Alophia veracruzana] Length = 182 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 9/190 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SYRCK D+I K K + + ++P ++ ++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHAELPNHLIIDPLQYKGLVNQIIDSK 175 Query: 187 KDVPYPVIMQ 196 + + Sbjct: 176 ---WIGLKIN 182 >gi|3098252|gb|AAC15574.1| small ribosomal protein 4 [Hildebrandtiella pachyclada] Length = 175 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 6 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 64 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SY+CK D I +K + K + + Sbjct: 65 LDNVIFRLGMAPTIPGARQLVNHRHILVNSCIVDIPSYQCKPQDFITIKNQRKSETIISK 124 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 125 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 173 >gi|108861094|gb|ABG21419.1| ribosomal protein small subunit 4 [Marsilea minuta] Length = 196 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+P S Q K S + ++L AKQ+++ YG ++E++ Sbjct: 1 IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ Sbjct: 58 RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186 SYRC+ D I V+ + + + R ++P+++S + + ++ Sbjct: 118 SYRCEPQDNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---A 174 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 K + + L+VE+YSR Sbjct: 175 KRESMDLNINELLIVEYYSR 194 >gi|7576649|gb|AAF63937.1| ribosomal protein system 4 [Phyllodrepanium falcifolium] Length = 186 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+ S ++ K S + ++L KQK++ +YG I+E++ + + Sbjct: 1 GVLPGLTNKTSQLNSSS---VNTSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN +V+I SYRC Sbjct: 57 IARKAKGSTGEILLQLLEMRLDNIIFRLGMSLTIPEARQLVNHRHILVNDCTVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K + + ++ +P +++ N +I + Sbjct: 117 KPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLKKKGLVNQILDRK---SIDLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|305672241|gb|ADM63544.1| ribosomal protein S4 [Nephrophyllidium crista-galli] gi|305672273|gb|ADM63560.1| ribosomal protein S4 [Menyanthes trifoliata] Length = 173 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A V + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTITARDEQKSRALVQNSIDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172 >gi|289599925|gb|ADD12913.1| ribosomal protein S4 [Hibbertia hermanniifolia] Length = 163 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K A + + Sbjct: 61 SMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSPHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 161 >gi|66990666|emb|CAI29111.1| small ribosomal protein 4 [Plagiochila incerta] Length = 176 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 5/180 (2%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G K+ + SY + K S + ++L KQK++ +YG + Sbjct: 1 GPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-L 56 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 TERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINN 116 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184 V+I SY C+ GD+I + K K + V++ ++ +P +++ + + + ++ + Sbjct: 117 DIVDIPSYNCEPGDIITIGNKQKSRSIVIKNINSFQKLKIPSHLTFDSTQLRGSCNQMIN 176 >gi|305672361|gb|ADM63604.1| ribosomal protein S4 [Pentaphragma sp. Duangjai 49] Length = 173 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----KAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRLAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + K A + ++ + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTIMARDGQKSRALIQKSLDSSPDEELPNHLTLHPFQYKGLVNQIIDS 172 >gi|299008266|gb|ADJ00094.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008268|gb|ADJ00095.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008270|gb|ADJ00096.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008272|gb|ADJ00097.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008274|gb|ADJ00098.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008276|gb|ADJ00099.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008278|gb|ADJ00100.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008280|gb|ADJ00101.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008282|gb|ADJ00102.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008284|gb|ADJ00103.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008286|gb|ADJ00104.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008288|gb|ADJ00105.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008290|gb|ADJ00106.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008292|gb|ADJ00107.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008294|gb|ADJ00108.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008304|gb|ADJ00113.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008306|gb|ADJ00114.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008308|gb|ADJ00115.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008310|gb|ADJ00116.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008312|gb|ADJ00117.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008314|gb|ADJ00118.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008316|gb|ADJ00119.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008318|gb|ADJ00120.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008320|gb|ADJ00121.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008322|gb|ADJ00122.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008324|gb|ADJ00123.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008326|gb|ADJ00124.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008328|gb|ADJ00125.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008330|gb|ADJ00126.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008332|gb|ADJ00127.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008334|gb|ADJ00128.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008336|gb|ADJ00129.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008338|gb|ADJ00130.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008340|gb|ADJ00131.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008342|gb|ADJ00132.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008344|gb|ADJ00133.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008346|gb|ADJ00134.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008348|gb|ADJ00135.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008350|gb|ADJ00136.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008352|gb|ADJ00137.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008354|gb|ADJ00138.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008356|gb|ADJ00139.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008358|gb|ADJ00140.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008360|gb|ADJ00141.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008362|gb|ADJ00142.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008364|gb|ADJ00143.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008366|gb|ADJ00144.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008368|gb|ADJ00145.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008370|gb|ADJ00146.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008372|gb|ADJ00147.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008374|gb|ADJ00148.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008376|gb|ADJ00149.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008378|gb|ADJ00150.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008380|gb|ADJ00151.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008382|gb|ADJ00152.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008384|gb|ADJ00153.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008386|gb|ADJ00154.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008388|gb|ADJ00155.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008390|gb|ADJ00156.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008392|gb|ADJ00157.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008394|gb|ADJ00158.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008396|gb|ADJ00159.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008398|gb|ADJ00160.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008400|gb|ADJ00161.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008402|gb|ADJ00162.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008404|gb|ADJ00163.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008406|gb|ADJ00164.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008408|gb|ADJ00165.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008410|gb|ADJ00166.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008412|gb|ADJ00167.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008414|gb|ADJ00168.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008416|gb|ADJ00169.1| small ribosomal protein 4 [Radula lindenbergiana] gi|299008418|gb|ADJ00170.1| small ribosomal protein 4 [Radula lindenbergiana] Length = 184 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G + +S +K S + ++L KQK++ +YG ++EK+ + A Sbjct: 1 PGLSNKTLKPKSISIDRSMSNKK--ISQYRIRLEEKQKLRFHYG-LTEKQLLKYVRIARN 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 +G T LI LE RLD I++ PTI ARQ VNH+H ++N +VNI SY C+ GD Sbjct: 58 IKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIPSYNCELGD 117 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I V+ + K + + L ++ ++P +++ + + + + + + Sbjct: 118 IITVRNRHKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDYNSINFKINEL 174 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 175 LVVEYYSR 182 >gi|184127949|gb|ACC67874.1| ribosomal protein small subunit 4 [Marattia douglasii] Length = 186 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD Sbjct: 17 QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 76 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 135 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++++ + RI + + + LVVE+YSR Sbjct: 136 SLNKDKIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 184 >gi|305672373|gb|ADM63610.1| ribosomal protein S4 [Echinops bannaticus] Length = 173 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P ++++ +I S Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172 >gi|305672291|gb|ADM63569.1| ribosomal protein S4 [Scaevola auriculata] Length = 170 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 10/179 (5%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KS + R P K S + +L+ KQK++ +YG ++E++ Sbjct: 1 KKIRRLGTLPGLSTKSVYDLRKNPP--------WKKSLYCTRLQEKQKLRFHYG-LTERQ 51 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G+T L+ LE RLD I++R PT+ ARQ VNH+H+LVNGR VN Sbjct: 52 LLKYVRIAGKAKGETGQVLLQLLEMRLDNILFRLGMAPTLPGARQLVNHKHILVNGRIVN 111 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLK 187 I SYRCK D IE + K A + + +VP+++++ RI Sbjct: 112 IPSYRCKPRDTIEARDDQKSRALIQKNLAAYLGEEVPDHLTIQPLQYKGLVKRIIDRES 170 >gi|289599854|gb|ADD12878.1| ribosomal protein S4 [Acrotrema costatum] Length = 163 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 2 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVN R V+I SYRCK D++ VK + K A + + Sbjct: 61 GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSSPHE 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 121 ELPKHLTLHTFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 161 >gi|53830736|gb|AAU95217.1| small ribosomal protein 4 [Syrrhopodon banksii] gi|53830738|gb|AAU95218.1| small ribosomal protein 4 [Syrrhopodon banksii] gi|53830740|gb|AAU95219.1| small ribosomal protein 4 [Syrrhopodon banksii] gi|53830742|gb|AAU95220.1| small ribosomal protein 4 [Syrrhopodon banksii] Length = 177 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD Sbjct: 11 STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ + Sbjct: 70 IIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFINIKDQQKYQTMIVKNTN 129 Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ P ++ N +I L + + LVVE+YSR Sbjct: 130 FFSKQKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175 >gi|305672181|gb|ADM63514.1| ribosomal protein S4 [Cichorium intybus] gi|305672299|gb|ADM63573.1| ribosomal protein S4 [Tragopogon dubius] Length = 173 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P ++++ +I S Sbjct: 116 IPSYRCKPRDTIAARDEQKSKALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172 >gi|284468553|gb|ADB90337.1| ribosomal protein subunit 4 [Kindbergia praelonga] Length = 180 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178 >gi|305672231|gb|ADM63539.1| ribosomal protein S4 [Billardiera heterophylla] Length = 173 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTTKRP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|157689446|gb|ABV65279.1| ribosomal protein S4 [Clidemia dentata] Length = 175 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 5/177 (2%) Query: 31 SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLIS 90 G L Q R K S + ++L KQK++ +YG ++E++ + A +++G T L+ Sbjct: 1 RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQ 59 Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150 LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D+I + K Sbjct: 60 LLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDDQKSR 119 Query: 151 ASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A + + R ++P++++++ +I S + + L V+ YSR Sbjct: 120 AVIQNYLDSSPREELPKHLTLHPFQYKGVVHQIIDSK---WVGLKINELLDVQHYSR 173 >gi|32401793|gb|AAP80885.1| small ribosomal protein 4 [Amborella trichopoda] Length = 178 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 5/180 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q R S + ++L KQK++ +YG ++E++ + A +++G T Sbjct: 1 KKPRSASDLRNQSRSGIRSLYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK GD + ++K Sbjct: 60 LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRLVDIPSYRCKPGDFVTTREKR 119 Query: 148 KQLASVLEA-SQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 K A + + P++++++ +I S + + L+VE+YSR Sbjct: 120 KNTALGPNIWNHPPXGEWPKHLTLHSLQYKGVVNQIIDSK---WVGLKVNELLIVEYYSR 176 >gi|305672245|gb|ADM63546.1| ribosomal protein S4 [Valerianella locusta] Length = 173 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KSP+ S L Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKSPIKRSS----LRNQSSSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + +++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHKELPKHLTLQSFQYKGLVNQIIDS 172 >gi|63101013|gb|AAY33131.1| small ribosomal protein 4 [Rhytidiopsis robusta] Length = 170 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 1 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 59 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 D +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 60 SDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 119 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + LVVE+YSR Sbjct: 120 NIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 168 >gi|305672265|gb|ADM63556.1| ribosomal protein S4 [Patrinia triloba] Length = 173 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + +++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNYLDSSPHKELPKHLTLQSFQYKGLVNQIIDS 172 >gi|77019191|emb|CAH60201.1| chloroplast 30S ribosomal protein S4 [Grimmia orbicularis] Length = 173 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 4 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYGRIARKAKGSTGQVLLQLLEMR 62 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD + R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 63 LDNVSLRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 122 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ +P +++ N +I L + + LVVE+YSR Sbjct: 123 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 171 >gi|305672343|gb|ADM63595.1| ribosomal protein S4 [Roussea simplex] Length = 173 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P + + Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRPRDESDF----RNQSRSEKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLNYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRLVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A V ++ + ++P +++++ +I S Sbjct: 116 IPSYRCKPQDTIMARDEQKSRALVQKSLDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172 >gi|32401785|gb|AAP80881.1| small ribosomal protein 4 [Pseudotsuga menziesii] Length = 174 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 + K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D Sbjct: 7 NRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSD 65 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 I++R PTI ARQ VNH H+ VN V+I SY CK DVI ++ + + + + Sbjct: 66 NIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSYPCKPQDVITIRDQPRLRTIIRKNI 125 Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +RD +P +++ N +I S + + LVVE+YSR Sbjct: 126 DLLQRDKLPNHLTFNSLQYKGFINQIIDSK---WISLKINELLVVEYYSR 172 >gi|14090434|gb|AAK53502.1| small ribosomal protein 4 [Syrrhopodon banksii] Length = 182 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD Sbjct: 16 STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ + Sbjct: 75 IIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFINIKDQQKYQTMIVKNTN 134 Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ P ++ N +I L + + LVVE+YSR Sbjct: 135 FFSKQKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|20531069|gb|AAM27356.1| ribosomal protein 4 [Notoligotrichum trichodon] Length = 186 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTGXTLQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R PTI ARQ V H+H+LVN R VNI SYRCK Sbjct: 59 RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + + A + + +++ + N +I L + + Sbjct: 119 DFITIKDRQESQAIIAKNIDFSQKFKXPNLWPFNFLEKKGLVNQI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|305672263|gb|ADM63555.1| ribosomal protein S4 [Triplostegia glandulifera] Length = 174 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G+ K P GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGDLPGLTNKKP----RAVSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGHIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + +P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPPEKLPKHLTLQSFQYKGLVNQIIDS 172 >gi|321309627|ref|YP_004191956.1| 30S ribosomal protein S4 [Mycoplasma haemofelis str. Langford 1] gi|319801471|emb|CBY92117.1| ribosomal protein S4 [Mycoplasma haemofelis str. Langford 1] Length = 204 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 107/209 (51%), Gaps = 10/209 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57 MS+ S K R++G +L + + R+ PG HG + K S +G QLR KQK Sbjct: 1 MSRFTGSIFKKSRKLGISLLENNREFTKWKKRTTPPGQHGNSGVRRKVSLYGEQLREKQK 60 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + YG + + + R FK A + G S+NL+ LE RLD +VYR F PT AARQ V+ Sbjct: 61 LALMYG-LHDAQLRRFFKAARKIEGSLSYNLLLLLERRLDNVVYRMNFAPTRRAARQLVS 119 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H HVLVNG+ V+I S D I + K L V + L E D P+Y+ V+ +N Sbjct: 120 HGHVLVNGKQVDIPSLWVNINDEIAIVPKYHHLPLV---NMLKEYDTPDYVDVDPENKRG 176 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++R P + + VVE++ R Sbjct: 177 IYLRYPHRRE---LNQQINEVYVVEWFKR 202 >gi|289599874|gb|ADD12888.1| ribosomal protein S4 [Dillenia indica] Length = 165 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I+ Sbjct: 1 RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +R TI ARQ VNHRH+LVN R V+I SYRCK D++ VK + K A + + Sbjct: 60 FRLGMTSTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSS 119 Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ +I S + + LVVE+YSR Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 163 >gi|37548839|gb|AAO32688.1| ribosomal protein 4 [Dawsonia polytrichoides] Length = 154 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 5/156 (3%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L KQK++ +YG I+E++ + + A R++G T L+ LE RLD I++R PTI Sbjct: 1 LEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPG 59 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISV 170 ARQ VNH+H+LVN VNI SYRCK D I +K + K + + +++ +P ++ Sbjct: 60 ARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIAKNIDFSQKYKIPNHLIF 119 Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N +I L + + LVVE+YSR Sbjct: 120 NSLERKGLVNQI---LDRESIGLKINELLVVEYYSR 152 >gi|184127989|gb|ACC67894.1| ribosomal protein small subunit 4 [Marattia oreades] Length = 187 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 102/190 (53%), Gaps = 9/190 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G + ++ + K K S + ++L AKQ+++ YG ++E++ + A ++ Sbjct: 1 GLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKA 58 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+ Sbjct: 59 KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 118 Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196 I V+ ++ V + + +D +PE+++++ + RI + + + Sbjct: 119 ISVRDQTNSQILVKKNLEFLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNIN 175 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 176 ELLVVEYYSR 185 >gi|42794687|gb|AAS45740.1| Rps4 [Satyria panurensis] Length = 211 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P K + Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNXRRTQSRXXXXXXXXXXXXXXXXXKL---R 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 ++ ++E++ + + +G L+ L RLD ++R TI ARQ VNHRH Sbjct: 58 FHXGLTERQLLKYVRIPGKPKGSPGQVLLXLLXMRLDKXLFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I SYRCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|14090456|gb|AAK53513.1| small ribosomal protein 4 [Leucophanes albescens] Length = 182 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD I++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SY CK D I +K + K +++ + Sbjct: 78 RLGLAPTIPGARQLVNHRHILVNNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFP 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P ++ N +I L + + LVVE+YSR Sbjct: 138 KYKTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|29422413|gb|AAO84602.1| small ribosomal protein 4 [Catoscopium nigritum] Length = 171 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 5/175 (2%) Query: 5 ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64 + +I RR+G K+P S ++ K S + ++L KQK++ +YG Sbjct: 1 RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56 Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 57 ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVAT 178 VNI SYRCK D I +K + K A + + +++ VP +++ N Sbjct: 117 DYIVNIPSYRCKPQDFISIKDQQKSQAIIXKNIDFSQKAKVPNHLTFNFLQKNGL 171 >gi|254995531|emb|CAO82723.1| ribosomal protein S4 [Diphasiastrum complanatum] Length = 152 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 5/154 (3%) Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R PTI AR Sbjct: 1 EKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGAR 59 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Q VNH+H+LVN R++N+ SYRCK D+I + +S+ A + + ++ ++ +P +++++ Sbjct: 60 QLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNEFSQTYKIPNHLTLHS 119 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + LVVE+YSR Sbjct: 120 LQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 150 >gi|62288926|sp|P69632|RR4_ARICA RecName: Full=30S ribosomal protein S4, chloroplastic gi|62288927|sp|P69633|RR4_ARIPL RecName: Full=30S ribosomal protein S4, chloroplastic gi|2292726|emb|CAA92531.1| ribosomal protein S4 [Aristea capitata] gi|2292728|emb|CAA92530.1| ribosomal protein S4 [Aristea platycaulis] Length = 183 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K RR+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIRRLGALPGFTSKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + ++P +++++ +I + Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNYIASSPHHEELPNHLTIDPFQYKGLVNQIIDN 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|78102623|gb|ABB21525.1| small ribosomal protein 4 [Chiloscyphus profundus] Length = 176 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 5/180 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V I SY C+ GD+I ++ K K + + + L ++ +P +++ + + + ++ + Sbjct: 117 VGIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINRE 176 >gi|305672351|gb|ADM63599.1| ribosomal protein S4 [Helwingia sp. Peng et al. 17408] Length = 173 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKVRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K +A + + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQKSIAMIQNSLDSSPHEELPNHLTLHPFQYKGLINQIIDS 172 >gi|184128083|gb|ACC67941.1| ribosomal protein small subunit 4 [Ophioglossum reticulatum] Length = 170 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 1 QPVSKKISQYCIRLEAKQRLRLNYG-LTERQLLKYVRIARRARGSTGQVSLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN R V++ SY C D+I V+ + + + + Sbjct: 60 IIFRLGMSPTIPGARQLVNHRHILVNDRVVDVPSYCCGPNDIITVRDRKNSQDLIRKNME 119 Query: 159 LA-ERDVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + E ++P ++S++ D + RI + + L+VE+YSR Sbjct: 120 SSYESEIPNHLSLSLSKSDKLKGFVNRIIDR---ESIGLEVNELLIVEYYSR 168 >gi|33413209|emb|CAD86771.1| ribosomal protein small subunit 4 [Distichium capillaceum] Length = 175 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 D +++R PTI ARQ VNHRH+LVN R VNI SYRCK D I +K + K A +++ Sbjct: 70 SDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFITIKDRQKSQAIIIK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 + +++ VP +++ N +I L + + LVVE+ Sbjct: 130 NIEFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIGLKINELLVVEY 175 >gi|14090440|gb|AAK53505.1| small ribosomal protein 4 [Syrrhopodon confertus] Length = 182 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD I++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SY CK D I +K + K +++ + Sbjct: 78 RLGLAPTIPGARQLVNHRHILVNNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFS 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P ++ N +I L + + LVVE+YSR Sbjct: 138 KYKTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|305672239|gb|ADM63543.1| ribosomal protein S4 [Pennantia cunninghamii] Length = 173 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I K + A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITAKDEQNSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|184128001|gb|ACC67900.1| ribosomal protein small subunit 4 [Angiopteris evecta] Length = 164 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 8/166 (4%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD I++R Sbjct: 1 ISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD- 163 PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + +D Sbjct: 60 MSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQ 119 Query: 164 VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PE+++ + + RI + + + LVVE+YSR Sbjct: 120 IPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 162 >gi|184127925|gb|ACC67862.1| ribosomal protein small subunit 4 [Danaea nodosa] Length = 180 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 11 PSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R P+I AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ + V + Sbjct: 70 ILFRLGMSPSIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIINVRNQTNSHSLVKRNLE 129 Query: 159 LAERD-VPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++D +PE+++ + D +I + + + LVVE+YSR Sbjct: 130 SLDKDKIPEHLTLSLLEDDKPQGLVNKIVTRD---SIGLNINELLVVEYYSR 178 >gi|305672329|gb|ADM63588.1| ribosomal protein S4 [Morina longifolia] Length = 173 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P R GL Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRPREKR----GLRNQSRSGKKSQYCIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A + +G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR ++ Sbjct: 56 LLKYVRIAGKVKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIID 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + +++P ++++ +I S Sbjct: 116 IPSYRCKPRDIIMARDEQNSRALIQNYLDSFPPKELPTHLTLQSVEYKGLVNQIIDS 172 >gi|305672369|gb|ADM63608.1| ribosomal protein S4 [Stylidium graminifolium] Length = 173 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKKP----RAGNDLRNQSRWGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A + +G T L+ LE RLD I++R PT+ ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKVKGSTGRVLLQLLEMRLDNILFRLGMAPTVPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTISARDEQKSRALIQNSLNSPPHEELPNHLTLDPFQYKGLVNQIIDS 172 >gi|15021384|gb|AAK77665.1| small ribosomal protein 4 [Sphagnum tenerum] Length = 188 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P + Y + K S + L KQK++ +YG I+E++ + Sbjct: 2 GILPGLTSKTPQSKSXY---IXQPISNKKVSQYRXXLEEKQKLRFHYG-ITERQLLKYVR 57 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A R++G T L+ LE RL +++R PTI ARQ VNHRH+LVN +VNI SYRC Sbjct: 58 IARRAKGSTGQVLLQLLEMRLXNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRC 117 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D I +K + K A + + + P +++++ + +I + Sbjct: 118 KPQDFITIKDRQKSQAIITXSMDYSRGYKTPNHLTLDSSQKKGSVNQIIXR---ESIGLK 174 Query: 195 MQPNLVVE 202 + L+VE Sbjct: 175 INELLIVE 182 >gi|51860459|gb|AAU11366.1| ribosomal protein small subunit 4 [Gnetum ula] Length = 196 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 10/201 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+ K P + R K S L+ KQK++ ++G ++E+ Sbjct: 1 FKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTER 56 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R + + +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN V Sbjct: 57 QLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVV 116 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSS 185 NI SY+CK DVI +K K + ++ E +P +++++ +I Sbjct: 117 NIPSYQCKPQDVITIKGKKIDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKIIDR 176 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 177 KD---IQLNIKEMLVIEYYSR 194 >gi|83416502|gb|ABC18271.1| small ribosomal subunit protein 4 [Garovaglia elegans] Length = 186 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 LPGLTNKIPQLKSGSINQ--STSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK Sbjct: 59 KTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I VK + + + ++ +P +++ +I L + + Sbjct: 119 DFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LDRESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|305672309|gb|ADM63578.1| ribosomal protein S4 [Escallonia coquimbensis] Length = 173 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K + + + ++P +++++ +I + Sbjct: 116 IPSYRCKPRDTITARDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDN 172 >gi|225024812|ref|ZP_03714004.1| hypothetical protein EIKCOROL_01699 [Eikenella corrodens ATCC 23834] gi|224942415|gb|EEG23624.1| hypothetical protein EIKCOROL_01699 [Eikenella corrodens ATCC 23834] Length = 140 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 4/143 (2%) Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 + E++FR F EA R +G T L+ LESRLD +VYR F T ARQ V+H+ +LVN Sbjct: 1 MLERQFRRYFAEASRRKGATGELLLQLLESRLDNVVYRMGFGSTRAEARQLVSHKAILVN 60 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 G VNI S++ K GD + V++K+K+ + E+ QLA + +P ++SV+ D F +P Sbjct: 61 GEVVNIPSFQVKAGDTVSVREKAKKQVRIQESLQLATQIGLPSWVSVDVDKQEGVFRNMP 120 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 V + LVVEFYS+ Sbjct: 121 DR---VDLYSDINEQLVVEFYSK 140 >gi|305672235|gb|ADM63541.1| ribosomal protein S4 [Villarsia sp. Fay s.n.] Length = 173 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNPSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTITARDEQKSRALIQNSIDSSLPEELPNHLTLHPFQYKGLVNQIIDS 172 >gi|51458203|gb|AAU03448.1| ribosomal protein small subunit 4 [Asplenium friesiorum] Length = 189 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 22 QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 81 VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 141 VGDKT-PDHLTVSLAEGDKPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|51860539|gb|AAU11406.1| ribosomal protein small subunit 4 [Ephedra rupestris] Length = 199 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 14/205 (6%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDIS 66 + KI RR+ K P + +H R K S + + L+ KQK++ +YG ++ Sbjct: 1 RFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 ERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHH 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVR 181 V+I SYRCK D+I +K K + + + VP Y++ N + Sbjct: 116 IVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNK 175 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + ++ LV+E+YSR Sbjct: 176 IIDTKD---LQLKIKEMLVIEYYSR 197 >gi|188012811|gb|ACD45544.1| ribosomal protein S4 [Oxymitra incrassata] Length = 195 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR G K+ + Y ++ K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRXGSLPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G L+ LE RLD I++R PTI A Q VNHRH+L+N + Sbjct: 57 RQLLKYVRIARKAKGSXGQVLLQLLEMRLDNIIFRLGMAPTIPGAXQLVNHRHILINNNT 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 +NI SY CK DVI +K++ K + + + ++ +P +++ + + +I Sbjct: 117 INIPSYNCKPKDVITIKERPKSQSIIAKNLNSFQKQKIPNHLTFDLMQVKGLVSQIIDR- 175 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 --EWVYLKINELLVVEYYSR 193 >gi|305672217|gb|ADM63532.1| ribosomal protein S4 [Azorella caespitosa] gi|305672275|gb|ADM63561.1| ribosomal protein S4 [Cryptothladia chinensis] Length = 173 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + R ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSFRDELPKHLTLQPFQYKGLVNQIIDS 172 >gi|184128043|gb|ACC67921.1| ribosomal protein small subunit 4 [Angiopteris lygodiifolia] Length = 169 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 96/167 (57%), Gaps = 8/167 (4%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L AKQ+++ +G ++E++ + A +++G T L+ LE RLD I++R Sbjct: 5 KISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 63 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + +D Sbjct: 64 GMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKD 123 Query: 164 -VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PE+++++ + RI + + + LVVE+YSR Sbjct: 124 QIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 167 >gi|305672207|gb|ADM63527.1| ribosomal protein S4 [Wittsteinia panderi] Length = 173 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGVLPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPLDTITARDEQKSRALIQNSLDSSPHEELPKHLTLHSFQYKGLVNKIIDS 172 >gi|99640065|emb|CAJ45150.1| putative ribosomal protein S4 gene [Thyrsopteris elegans] Length = 199 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKIIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V+I SYRCK D+I V+ + + + R ++P++++ + Sbjct: 115 RIVDIPSYRCKPKDIITVRNRPTSYNGLRGGINESSRGDEIPDHLTFSVLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|7576633|gb|AAF63929.1| ribosomal protein system 4 [Lepidopilum scabrisetum] Length = 167 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++ Sbjct: 5 NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIF 63 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH++VN V+I SYRCK D I +K + K A + + + + Sbjct: 64 RLGMAPTIPGARQLVNHRHIVVNDSIVDIPSYRCKPQDFITIKNQQKSKAIISKNIEFYQ 123 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P Y++ N +I L + + LVVE+YSR Sbjct: 124 KIKIPNYLTYNFVEKKGLINQI---LDRESIGLKINELLVVEYYSR 166 >gi|305672283|gb|ADM63565.1| ribosomal protein S4 [Viburnum opulus] Length = 173 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRVLIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|305672305|gb|ADM63576.1| ribosomal protein S4 [Phelline comosa] Length = 173 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 6/178 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 I SYRCK D I + + K A + + + ++P Y++++ +I S Sbjct: 116 IPSYRCKPRDTITTRDEQKSRALIQNSLDSSPHEELPNYLTLHPFQYKGLVNQIIDSE 173 >gi|305672229|gb|ADM63538.1| ribosomal protein S4 [Moschopsis rosulata] Length = 173 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQLRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P ++++ +I S Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172 >gi|305672221|gb|ADM63534.1| ribosomal protein S4 [Polyosma sp. McPherson 18643] gi|305672261|gb|ADM63554.1| ribosomal protein S4 [Sphenostemon lobosporus] gi|305672267|gb|ADM63557.1| ribosomal protein S4 [Quintinia quatrefagesii] Length = 173 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|117306734|emb|CAH73335.1| ribosomal protein S4 [Ptychomnion cygnisetum] Length = 183 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 TKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDSIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + + ++ +P +++ + +I L + + Sbjct: 117 FIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|51458195|gb|AAU03444.1| ribosomal protein small subunit 4 [Asplenium praemorsum] Length = 189 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 22 QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 81 VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 141 VGDKT-PDHLTVSLAEGDKPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|305672295|gb|ADM63571.1| ribosomal protein S4 [Torricellia tiliifolia] Length = 173 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R +K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSAKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGGIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + D +P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|99639939|emb|CAJ45114.1| putative ribosomal protein S4 gene [Calochlaena dubia] Length = 195 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 11/199 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K+ + RK S F ++L AKQ+++ YG ++E++ Sbjct: 1 RRLKNLPGLTGKASNPRETRVTTDQSASRK--ISQFCVRLEAKQRLRFNYG-LTERQLLR 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T + LE RLD I++ + TI AARQ VNHRH++VN R V++ S Sbjct: 58 YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRIVDVPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIPSSLK 187 YRCK D+I ++ + + + R D+P++++ + RI Sbjct: 118 YRCKPKDIITIRNRPTSYNGLKSGINESSRGGDIPDHLTFSLLEGNRPKGLVNRI---AN 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIDLNINELLVVEYYSR 193 >gi|6002063|emb|CAA58938.1| ribosomal protein S4 [Luzula sylvatica] Length = 200 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 11/207 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI R+ L G + R K P + L KQK++ Sbjct: 1 MSRYRGPRVKITNRLRAFLPGLIDKKYKIKER---KKYFRYKKIPKQYNNCLIEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +S+G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 58 HYG-LTERQLVRYIRIAGKSKGSTGQVLLQLLEMRLDNILFRLSMAWTIREARQLVNHRH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL----AERDVPEYISVNHDNMV 176 +LVNGR V+I SYRCK GD+I K K + L +R +P+++S+N Sbjct: 117 ILVNGRIVDIPSYRCKPGDIIATKDNQKSKDLIRRCIGLTRQRKKRLLPKHLSINSREYK 176 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEF 203 A +I + + + LVVE+ Sbjct: 177 AKVKKIIDRTE---VYLKIDELLVVEY 200 >gi|320455036|dbj|BAJ65665.1| small ribosomal protein 4 [Metzgeria temperata] gi|320455040|dbj|BAJ65667.1| small ribosomal protein 4 [Metzgeria temperata] Length = 187 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKSKSSY---IDRPAPNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P +++ + ++ + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSIQKQGIPNHLAFDSTKIIGSVNRVINR- 175 Query: 187 KDVPYPVIMQPNLV 200 + + LV Sbjct: 176 --ECIDLKINELLV 187 >gi|293612016|gb|ADE48452.1| ribosomal protein 4 [Stangeria eriopus] Length = 162 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A R++G T L+ LE R D ++R Sbjct: 1 KISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 PTI ARQ VNHRH+LVN V+I SYRCK DVI V+ + + + + L+++D Sbjct: 60 GMAPTIPGARQLVNHRHILVNDCVVDIPSYRCKPLDVITVRNQQGLRSMIDKNLNLSQKD 119 Query: 164 -VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++++ +I S + + LVVE+YSR Sbjct: 120 QMPNHLTLHSSRYKGLVNQIIDSK---WISLKVNELLVVEYYSR 160 >gi|32879547|emb|CAE11884.1| ribosomal protein S4 [Onira unguiculata] Length = 180 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 9/188 (4%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D+I K K + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK-- 173 Query: 189 VPYPVIMQ 196 + + Sbjct: 174 -WIGLKIN 180 >gi|14090458|gb|AAK53514.1| small ribosomal protein 4 [Leucophanes glaucum] Length = 182 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ + + A R +G T L+ LE RLD I++ Sbjct: 19 NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARRVKGSTGQVLLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNHRH+LVN R VNI SY CK D I +K + K +++ + Sbjct: 78 RLGLAPTIPGARQLVNHRHILVNNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFP 137 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P ++ N ++ L + + LVVE+YSR Sbjct: 138 KYKTPNHLIFNSVEKKGLVNQL---LDQESIGLKINELLVVEYYSR 180 >gi|80974166|gb|ABB53776.1| small ribosomal subunit protein 4 [Hampeella concavifolia] Length = 187 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 7/190 (3%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 NL G +S +K S + ++L KQK++ +YG I+E++ + + A Sbjct: 2 NLPGLTNKIPQLKSNSINQSTSTKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R PTI ARQ VNHR +LVN VNI SYRCK Sbjct: 59 RKAKGSTGEVLLQLLEMRLDNILFRLNMAPTIPGARQLVNHRQILVNNCIVNIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 D I VK + + +++D +P ++ + +I L + + Sbjct: 119 QDFIIVKNLKSSEVRINKNKDFSQKDKIPNHLIYSSLEKKGLVNKI---LDRESIGLKIN 175 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 176 ELLVVEYYSR 185 >gi|305672297|gb|ADM63572.1| ribosomal protein S4 [Barnadesia arborea] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P ++++ +I S Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172 >gi|184127987|gb|ACC67893.1| ribosomal protein small subunit 4 [Marattia oreades] Length = 174 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 5 QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDN 63 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 64 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 123 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++++ + RI + + + LVVE+YSR Sbjct: 124 FLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 172 >gi|305672357|gb|ADM63602.1| ribosomal protein S4 [Sambucus caerulea] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P++++++ +I + Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDN 172 >gi|184127973|gb|ACC67886.1| ribosomal protein small subunit 4 [Marattia smithii] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 4 QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDN 62 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 63 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 122 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++++ + RI + + + LVVE+YSR Sbjct: 123 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 171 >gi|305672367|gb|ADM63607.1| ribosomal protein S4 [Ilex crenata] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K + V + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQKSIVLVQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|16565378|gb|AAL26204.1|AF313603_1 small ribosomal protein 4 [Equisetum bogotense] Length = 190 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G V ++ Q + K S + ++L AKQ+++ YG ++E++ + + A Sbjct: 1 LPGLTNKLVESKKNQASGSDQSIQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 ++G T L+ LE RLD I++R VPTI +ARQ +NHRH+LVN R V++ S+ CK Sbjct: 60 CAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRHILVNDRIVDVPSFHCKPK 119 Query: 139 DVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVI 194 D+I + + + + + A+ +P+++++ + + + Sbjct: 120 DIITIGAPKIYQSIITKRIESFAKDQIPDHLTLSLSEPKKPKGFVNYLINR---ESIGLK 176 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 177 INELLVVEYYSR 188 >gi|305672285|gb|ADM63566.1| ribosomal protein S4 [Crispiloba disperma] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+L+NGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILINGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A V + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDTITARDEQKSRALVQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|14090452|gb|AAK53511.1| small ribosomal protein 4 [Arthrocormus schimperi] gi|14090454|gb|AAK53512.1| small ribosomal protein 4 [Arthrocormus schimperi] Length = 182 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD I++R Sbjct: 21 KVSQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ + + Sbjct: 80 GLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQKMIIKNTSFFPKY 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P ++ N +I L + + LVVE+YSR Sbjct: 140 KTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180 >gi|124021100|gb|ABM88823.1| small ribosomal protein subunit 4 [Aneura maxima] Length = 188 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 9/193 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 3 RSGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I SY Sbjct: 59 VFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK GDVI + + K + + Q + +P +++ + V + +I + Sbjct: 119 NCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WIYL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 KINELLVVEYYSR 186 >gi|32879551|emb|CAE11886.1| ribosomal protein S4 [Crocosmia mathewsiana] Length = 180 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 10/188 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 56 LKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKD 188 SYRCK D+I K + A + + + ++P +++++ +I S Sbjct: 116 PSYRCKPRDIITTNNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK-- 173 Query: 189 VPYPVIMQ 196 + + Sbjct: 174 -WIGLKIN 180 >gi|52788819|gb|AAU87382.1| ribosomal protein small subunit 4 [Thelypteris palustris] Length = 199 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 8/202 (3%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ + Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKNLPGFTGRGKTPNLVEFRVATDQSASRKISQFCVRLEAKQRLRFNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++RG T + LE RLD +++R TI AARQ VNHRH+LVN R Sbjct: 60 RQLLKYVRIARKTRGSTGQVPLQLLEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPS 184 V+I SYRCK D+I V+ + + L P++++V + R+ Sbjct: 120 VDIPSYRCKPKDIITVRNRPTSY-NALRGESPGGDKTPDHLTVSLLEGNRPTGLVNRV-- 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 -ANRESVNLNINELLVVEYYSR 197 >gi|305672223|gb|ADM63535.1| ribosomal protein S4 [Paracryphia alticola] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRTLIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|305672257|gb|ADM63552.1| ribosomal protein S4 [Heptacodium miconioides] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 6/178 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P R GL Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKKPRTRR----GLRNQSHSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +S+G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKSKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 I SYRCK D+I + + A + + + R +P ++++ +I S Sbjct: 116 IPSYRCKPRDIIMARDEQNSRALIQNSLNSSRRKKLPNHLTLQQFQYKGLVNQIIDSE 173 >gi|66866243|gb|AAY57790.1| small ribosomal protein 4 [Mesochaete undulata] Length = 191 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 12/195 (6%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G +S K S + ++L KQK++ +YG I+E++ + + A Sbjct: 1 SLPGLTNKTPQLKSSSINQ--STFNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 57 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN + V+I SY+CK Sbjct: 58 RKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDQIVDIPSYQCKP 117 Query: 138 GDVIEVKQKSKQLASVLEASQLAE------RDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 D I +K + K A + +P ++ + +I L Sbjct: 118 QDFITIKDRQKSQAIIXXXXXXKNIYFYQKYKIPNHLIYSSLEKKGLVNQI---LDRESI 174 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 GLKINELLVVEYYSR 189 >gi|42794685|gb|AAS45739.1| Rps4 [Satyria meiantha] Length = 211 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 13/213 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P S ++K S + ++L+ KQK Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRXTQSRFVKKK--KSQYHIRLQKKQKXGF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG + ++K + + +G L+ LE RL I +R TI ARQ VNHRH Sbjct: 59 HYG-LPKRKLLKSVRFPGKXKGSPGQVLLQLLEMRLXNIXFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173 VLVNGR ++I S RCK D+I ++KS+ S L R VP ++++N Sbjct: 118 VLVNGRIIDIPSXRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I ++ + ++ LVVE+YSR Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|305672289|gb|ADM63568.1| ribosomal protein S4 [Arctopus dregei] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITSRDEQNSRALIQNSFDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|80974174|gb|ABB53780.1| small ribosomal subunit protein 4 [Ptychomnion densifolium] Length = 181 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 12 INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMR 70 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN VNI SYRCK D I +K + + + Sbjct: 71 LDNIIFRLGMAPTIPGARQLVNHRHILVNDSIVNIPSYRCKPQDFIIIKDEKNSEGIINK 130 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ + +I L + + LVVE+YSR Sbjct: 131 NEDFYQKSKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINELLVVEYYSR 179 >gi|305672335|gb|ADM63591.1| ribosomal protein S4 [Platysace lanceolata] Length = 173 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P + G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRPRD----GSDLRSQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V+ Sbjct: 56 LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGGIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I K + A + + + D +P++++++ +I S Sbjct: 116 IPSYRCKPRDIITAKDEQNSRALIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|294337204|emb|CAQ52751.1| ribosomal protein S4 [Meteorium polytrichum] Length = 155 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 5/157 (3%) Query: 51 QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 +L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R PTI Sbjct: 1 RLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIP 59 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYIS 169 ARQ VNHRH+LVN V+I SYRCK D I +K + K + + + ++ +P +++ Sbjct: 60 GARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLT 119 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +I L + + LVVE+YSR Sbjct: 120 YSSLEKKGLVTQI---LDRESIGLKINELLVVEYYSR 153 >gi|74273123|gb|ABA01261.1| ribosomal protein S4 [Passiflora misera] Length = 183 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 5/168 (2%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R + S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD I Sbjct: 18 SRFGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNI 76 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + ++ Sbjct: 77 LFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDS 136 Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R ++P ++ + +I S + + LV+E+YSR Sbjct: 137 FPRNNLPTHLILYPKKYKGLVTQIIDSK---CLGLKINEFLVIEYYSR 181 >gi|49574596|ref|NP_848062.2| ribosomal protein S4 [Adiantum capillus-veneris] gi|60393878|sp|Q85FL8|RR4_ADICA RecName: Full=30S ribosomal protein S4, chloroplastic gi|48476001|gb|AAP29394.2| ribosomal protein S4 [Adiantum capillus-veneris] Length = 197 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 10/200 (5%) Query: 12 DRRIGEN--LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 RR+ L G KS + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLTGTGKSNTSNLGEFRLAVDQSTSRKISQFCVRLEAKQRLRLNYG-LTERQ 59 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A R+RG T L+ LE RLD I+++ TI AARQ V HRH+LVN R V+ Sbjct: 60 LLRYVRIARRTRGSTGQVLLQLLEMRLDNIIFQLGMASTIPAARQLVCHRHILVNHRVVD 119 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSL 186 I SYRCK D+I ++ + A+ L++ L+ +VP++++++ + + Sbjct: 120 IPSYRCKPRDIISIRNRPTS-ANALKSESLSGNEVPDHLTLSISKTGEPTGLVNHLVNR- 177 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 --ESVNLDINELLVVEYYSR 195 >gi|18860313|ref|NP_569631.1| ribosomal protein S4 [Psilotum nudum] gi|26399157|sp|Q95CA6|RR4_PSINU RecName: Full=30S ribosomal protein S4, chloroplastic gi|18389466|dbj|BAB84218.1| ribosomal protein S4 [Psilotum nudum] Length = 199 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + L+L AKQ+++ YG ++E++ A ++RG T L+ LE RLD Sbjct: 30 QSTSKKRSQYSLRLEAKQRLRFNYG-VTERQLLKYVCIAKKARGSTGQVLLQLLEMRLDN 88 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN + V+I SYRCK D+I V+ K + + Sbjct: 89 IIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSYRCKPNDIITVRDHQKSQELIKRNIK 148 Query: 159 LAE-RDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 LA+ ++P +++ + +I + + LVVE+YSR Sbjct: 149 LAKIDEIPSHLNISYLEETKPKGFINKIVDRG---SIGLEINELLVVEYYSR 197 >gi|305672365|gb|ADM63606.1| ribosomal protein S4 [Cardiopteris moluccana] Length = 173 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNK----RLRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|305672315|gb|ADM63581.1| ribosomal protein S4 [Anopterus macleayanus] Length = 173 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDPRNQSHSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTITARDEQKSRALIQNFLDSSPHEELPNHLTLHSFQYKGLVNQIIDS 172 >gi|53830756|gb|AAU95227.1| small ribosomal protein 4 [Syrrhopodon revolutus] gi|53830758|gb|AAU95228.1| small ribosomal protein 4 [Syrrhopodon revolutus] gi|53830760|gb|AAU95229.1| small ribosomal protein 4 [Syrrhopodon revolutus] gi|53830762|gb|AAU95230.1| small ribosomal protein 4 [Syrrhopodon revolutus] gi|53830764|gb|AAU95231.1| small ribosomal protein 4 [Syrrhopodon revolutus] gi|53830766|gb|AAU95232.1| small ribosomal protein 4 [Syrrhopodon revolutus] gi|53830768|gb|AAU95233.1| small ribosomal protein 4 [Syrrhopodon revolutus] Length = 177 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + + A +G T L+ LE R Sbjct: 8 INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARNVKGSTGQILLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K +++ Sbjct: 67 LDNIIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFITIKDQKKYQTMIVK 126 Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P ++ N +I L + + LVVE+YSR Sbjct: 127 NTNFFSKHKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175 >gi|305672189|gb|ADM63518.1| ribosomal protein S4 [Apium graveolens] Length = 173 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + +D +P+++++ +I S Sbjct: 116 IPSYRCKPQDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLVNQIIDS 172 >gi|51458085|gb|AAU03395.1| ribosomal protein small subunit 4 [Asplenium ruta-muraria subsp. ruta-muraria] Length = 189 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ ++ ++ S Sbjct: 81 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRTTSCNALKNKSL 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D + R+ + + LVVE+YSR Sbjct: 141 VGDKT-PDHLTVSLSEGDRLTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|115443574|ref|YP_778593.1| 30S ribosomal protein S4 [Bigelowiella natans] gi|122233787|sp|Q06J34|RR4_BIGNA RecName: Full=30S ribosomal protein S4, chloroplastic gi|110810219|gb|ABG91425.1| 30S ribosomal protein S4 [Bigelowiella natans] Length = 194 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 17/207 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S+ K+ RR+G KS Q + S +G L+ KQK++ Sbjct: 1 MARYRGSRVKVIRRLGLLPGFTSKSSNK---------PQNNNKQLSQYGFHLQEKQKLRY 51 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG ISE + K A R RG++ L+ LE RLDT++YR FVPT+ +ARQ ++H H Sbjct: 52 NYG-ISEHELIKYVKSARRKRGNSGDKLLQLLEMRLDTLLYRTGFVPTVASARQLISHGH 110 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNH--DNMVAT 178 + VNG+ V+I + C D I + ++ + + S ++ +N +++ T Sbjct: 111 INVNGKKVDIPGFNCSISDKIVINKEILKSLNDKNNSFSTLN--CSHLVLNELNNDLTIT 168 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYS 205 +P + LV+E+YS Sbjct: 169 VTNLPDIQ---VLGYSINILLVLEYYS 192 >gi|51860531|gb|AAU11402.1| ribosomal protein small subunit 4 [Ephedra ochreata] gi|125662726|gb|ABN50313.1| small ribosomal protein 4 [Ephedra nevadensis] Length = 198 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 14/204 (6%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISE 67 KI RR+ K P + +H R K S + + L+ KQK++ +YG ++E Sbjct: 1 FKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 RQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRI 182 V+I SYRCK D+I +K K + + + VP Y++ N +I Sbjct: 116 VDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKI 175 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + ++ LV+E+YSR Sbjct: 176 IDTKD---LQLKIKEMLVIEYYSR 196 >gi|301167516|emb|CBW27099.1| 30S ribosomal protein S4 [Bacteriovorax marinus SJ] Length = 208 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 10/209 (4%) Query: 1 MSKRES--SKHKIDRRIGENLWGRPKS-PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57 M+K + ++ KI R +G L G K+ + R YGPG+HG RRK K S + ++L+ KQK Sbjct: 1 MAKATTGKARFKIQRALGLELPGLGKAGALERRPYGPGVHGNRRK-KISDYAVRLKEKQK 59 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGD-TSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 + +YG + EK+ S K+A +++ L+S LESRL+ +++R + P++ AA Q V Sbjct: 60 LVYHYG-LREKQLVSYVKQAKKNQTKPWMETLLSTLESRLNNVIFRLNWAPSMAAASQMV 118 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175 H V VNG+ V+ S+ K+GDVI + K + + VP ++ D Sbjct: 119 AHGQVQVNGKKVDKSSFIVKKGDVITLSDKGYANQLYKSSVESPRMATVPACYNIEADKK 178 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 T + +P P + LV+E+Y Sbjct: 179 KGTMIDLPLPSD---IPFEFEQQLVIEYY 204 >gi|320455034|dbj|BAJ65664.1| small ribosomal protein 4 [Metzgeria furcata] Length = 185 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E + L + +P +++ + + + ++ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERFNSLQKPGIPNHLAFDSTKFIGSVNQMINR- 175 Query: 187 KDVPYPVIMQPN 198 + + Sbjct: 176 --EWIDLEINEL 185 >gi|305672321|gb|ADM63584.1| ribosomal protein S4 [Gonocaryum litorale] Length = 173 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNK----RLRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I V+ + K A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITVRDEQKSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|12330550|gb|AAG52812.1| ribosomal protein 4 [Mittenia plumula] Length = 186 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + +S + K S + ++L K K++ +YG I+E++ + + A Sbjct: 2 LPGLTNKILQLKSST--ISXSTSNXKISQYRIRLEEKHKLRXHYG-ITERQLLNYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 59 KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D I +K + K + + ++ +P +++ N +I + + Sbjct: 119 DFITIKDQQKYQTIISKNIDFYQKYKIPNHLTYNSLXKKGXINQIXDR---ESIGLKINE 175 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 176 LLVVEYYSR 184 >gi|305672277|gb|ADM63562.1| ribosomal protein S4 [Corokia macrocarpa] Length = 173 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + ++P ++++ +I S Sbjct: 116 IPSYRCKPRDTITSRNEQKSRALIQNYLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172 >gi|32401767|gb|AAP80872.1| small ribosomal protein 4 [Pinus krempfii] Length = 194 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 7/191 (3%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P N + K S + ++L KQK++ +YG ++E++ + Sbjct: 8 TLPGLTSKRPKNRQDSM--NMNWSSCRKISQYRIRLEEKQKLRSHYG-LTERQLLKYVRV 64 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + R++G T L+ LE RLD I++R PTI ARQ VNH H+ N V+I SY CK Sbjct: 65 SRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGHIRFNDHMVDIPSYPCK 124 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 DVI ++ + + A + + L +RD +P +++ + +I S + Sbjct: 125 PQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFINQIIDSK---WISLKS 181 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 182 NELLVVEYYSR 192 >gi|14090462|gb|AAK53516.1| small ribosomal protein 4 [Macromitrium incurvifolium] Length = 182 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + A +++G T L+ LE R Sbjct: 13 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLXYIRIARKAKGSTGEVLLQLLEMR 71 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K + + Sbjct: 72 LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPLDFITIKDRRKSQDIINK 131 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P ++ N +I + + LVVE+YSR Sbjct: 132 NIDFYQKSKIPNHLIYNSLEKKGLVNQIIER---ELIGLKINELLVVEYYSR 180 >gi|82799233|gb|ABB92160.1| 30S ribosomal protein S4 [uncultured marine type-A Synechococcus 4O4] Length = 147 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 5/149 (3%) Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + YG +SE++ K+A G T NL+ LE+RLD + +R F PT+ ARQ VNH Sbjct: 1 RFNYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNH 59 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177 HV VNGR +I SY+CK GDV+ ++++ + +VP ++ ++ + A Sbjct: 60 GHVTVNGRVTDIASYQCKPGDVVAIRERKCSKQLAEGNLEFPGLANVPTHLELDKAKLSA 119 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 120 KVT---GRCEREWVALEINELLVVEYYSR 145 >gi|78102635|gb|ABB21531.1| small ribosomal protein 4 [Plagiochila corrugata] Length = 175 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 5/179 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+L+N Sbjct: 57 RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHILINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SY C+ GD+I + K K A V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR 175 >gi|59803295|gb|AAX07756.1| Rps4 [Conocephalum conicum] Length = 153 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 5/155 (3%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK++ ++G ++E++ + A +++G T L+ LE RLD I++R PTI A Sbjct: 1 EEKQKLRFHFG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGA 59 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171 RQ VNHRH+L+N +V+I SY CK DVI +K + K + + + + ++ +P ++S + Sbjct: 60 RQLVNHRHILINNITVDIPSYNCKPKDVITIKDRQKSQSIITKNLKSFQKSKIPNHLSFD 119 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +I + + LVVE+YSR Sbjct: 120 LIQIKGLVNQIIDR---EWIYLKINELLVVEYYSR 151 >gi|63145913|gb|AAY33894.1| small ribosomal protein 4 [Pallavicinia xiphoides] Length = 192 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 I RR+G L G + +R PG + K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGA-LPGLSYKMLGSR---PGYTNRLTANKKISQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A ++G T L+ LE RLD IV+R PTI AARQ VNHRH+++N VN Sbjct: 56 LLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIIINDNIVN 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKD 188 I SY CK DVI + + + + + L ER +P +++ + + +I Sbjct: 116 IPSYNCKPKDVITIGNRRESRLVITKNINLFRERRIPNHLTFDSTRFCGSVNQIIDR--- 172 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 EWISLKINELLVVEYYSR 190 >gi|99640040|emb|CAJ45145.1| putative ribosomal protein S4 gene [Sphaeropteris auriculifera] Length = 199 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TRS Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKTSNPGETRSAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R ++P++++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|305672371|gb|ADM63609.1| ribosomal protein S4 [Forstera bidwillii] Length = 173 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RTVSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNG V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGCIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTIAARDEQKSKALIQNFLDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172 >gi|51458197|gb|AAU03445.1| ribosomal protein small subunit 4 [Asplenium protensum] Length = 188 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 21 QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 80 VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 140 VGDKT-PDHLTVSLAEGDKPAGLVNRV---ANRESINLNINELLVVEYYSR 186 >gi|117306738|emb|CAH73337.1| ribosomal protein S4 [Glyphothecium sciuroides] Length = 183 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE R D I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 TKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + + ++ +P +++ + +I L + + Sbjct: 117 FIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|165936370|ref|ZP_02224938.1| 30S ribosomal protein S4 (BS4) [Yersinia pestis biovar Orientalis str. IP275] gi|165915486|gb|EDR34095.1| 30S ribosomal protein S4 (BS4) [Yersinia pestis biovar Orientalis str. IP275] Length = 131 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 4/134 (2%) Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 +KEA R +G+T NL+ LE RLD +VYR F T +RQ V+H+ ++VNGR VNI SY Sbjct: 1 YKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKAIMVNGRVVNIASY 60 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 + DV+ +++K+K+ + V A +LAE R+ P ++ V+ M F RIP Sbjct: 61 QVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKMEGVFKRIPERTD---LS 117 Query: 193 VIMQPNLVVEFYSR 206 + +L+VE YS+ Sbjct: 118 ADINEHLIVELYSK 131 >gi|32401864|gb|AAP80920.1| small ribosomal protein 4 [Torreya taxifolia] Length = 192 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N G + KPS + + L+ KQ+++ +YG ++E++ + A Sbjct: 2 LPGLSKKTPNRIIEKSGKRKHSKPPKPSKYPVCLKEKQRLRFHYG-LTERQLLQYVRIAR 60 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R+ G T L+ LE RLDTI++R TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 61 RANGPTGQVLLQLLEMRLDTIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 120 Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193 D+I +K + + + + L++RD VP ++++ + +I S + + Sbjct: 121 DLISIKDQQRSRNIINKNIDLSQRDKIWVPNHLNLKKKKSQYIGLVKKIVDSKR---ISL 177 Query: 194 IMQPNLVVEFYS 205 + LVVE+YS Sbjct: 178 KINELLVVEYYS 189 >gi|12330490|gb|AAG52782.1| ribosomal protein 4 [Nyholmiella obtusifolia] Length = 189 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P S S++ ++L KQK + +YG I+E++ + Sbjct: 1 RLGVLPGLTNKTPQLKSSS---SIQSTSNKTISHYRIRLEEKQKXRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD +++R PTI ARQ VN RH++ B R V+I SY Sbjct: 57 VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQXVNXRHIIXBHRIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D I +K + K + + +P +++ N +I L Sbjct: 117 RCKPXDFITIKNRQKSQDIITXNIDFNXKYKIPNHLTYNSLEKKGFVNQI---LDRELIG 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|86438876|emb|CAJ55417.1| small ribosomal protein 4 [Plagiochila ansata] Length = 164 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 5/165 (3%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ FLE RLD Sbjct: 4 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQFLEMRLDN 62 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R PTI ARQ VNHRH+ +N V+I SY C+ GD+I ++ K K +++ + Sbjct: 63 TIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNIN 122 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 + +P +++ + + + ++ + + + LVVE Sbjct: 123 SFHKLKIPSHLTFDSTQLRGSVNQMINR---EWINLKINELLVVE 164 >gi|52788791|gb|AAU87376.1| ribosomal protein small subunit 4 [Ceratopteris richardii] Length = 199 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+ Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKLMRRLNNLPGLVGKNKTFNLGESKVASDQSVSKKISQFCIRLEAKQRLRFNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++RG T L+ LE RLD I+++ TI AARQ VNHRH+LVN R Sbjct: 60 RQLLKYVRIARKTRGSTGQVLLQLLEMRLDNIIFQLGLASTIPAARQLVNHRHILVNQRI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVATFVRIPS 184 V+I SYR K D+I ++ + SV + + +P++++++ D + Sbjct: 120 VDIPSYRRKPKDIITIRNRPTSYNSVKK-ESFEGQKIPDHLTLSLLKTDQPTGLVNHM-- 176 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 -ASRESVDLNLNELLVVEYYSR 197 >gi|305672319|gb|ADM63583.1| ribosomal protein S4 [Mackinlaya confusa] Length = 173 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ YYG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQPRSGKKSQYRIRLEEKQKLRFYYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ +NHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLINHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|37548837|gb|AAO32687.1| ribosomal protein 4 [Dawsonia superba var. pulchra] Length = 175 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L K ++ +YG I+E++ + + A R++G T L+ LE RLD I++ Sbjct: 12 NKKLSXYRIRLEEKXILRFHYG-ITERQLLNYVRIARRAKGSTGQILLHLLEMRLDNIIF 70 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R PTI ARQ VNH+H+LVN VNI SYRCK D I +K + K ++ ++ Sbjct: 71 RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIVXNIDFSQ 130 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ NH +I L + + LVVE+YSR Sbjct: 131 KYKIPNHLIFNHLERKGLVNQI---LDRESIGLKINELLVVEYYSR 173 >gi|305672317|gb|ADM63582.1| ribosomal protein S4 [Tetradoxa omeiensis] Length = 173 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + ++P++++++ +I + Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLESSPHEELPKHLTLHPFQYKGLVNQIIDN 172 >gi|305672187|gb|ADM63517.1| ribosomal protein S4 [Citronella suaveolens] Length = 173 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGLAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSFDSSPHEELPKHLTLHPFQYKGLVNQIIES 172 >gi|305672225|gb|ADM63536.1| ribosomal protein S4 [Adoxa moschatellina] Length = 173 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + ++P++++++ +I + Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLESSPHEELPKHLTLHAFQYKGLVNQIIDN 172 >gi|99640071|emb|CAJ45151.1| putative ribosomal protein S4 gene [Cyathea gibbosa] Length = 199 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR+ Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R ++P++++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVD 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|89147822|gb|ABD62759.1| ribosomal protein 4 [Apotreubia nana] Length = 183 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 6/167 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG ++E++ A +++G T L+ LE RLD I++ Sbjct: 19 NKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVDIARKAKGSTGEVLLQLLEMRLDNIIF 77 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--L 159 R TI ARQ VNHRH+L+N ++VN+ SY CK D+I V+ + + + + Sbjct: 78 RLGLAFTIPGARQLVNHRHILINNKTVNVPSYNCKPKDIITVQNRPTSQFLITKNIEDYS 137 Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ + + +I + + LVVE+YSR Sbjct: 138 NKYQIPNHLTFDSMKKMGLVNQIIDR---ELINLKINELLVVEYYSR 181 >gi|124021088|gb|ABM88817.1| small ribosomal protein subunit 4 [Aneura pinguis] Length = 184 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 9/191 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 1 GTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVF 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I SY C Sbjct: 57 TARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 K GDVI + + K + + Q + +P +++ + V + +I + + Sbjct: 117 KPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WIYLKI 171 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 172 NELLVVEYYSR 182 >gi|14090446|gb|AAK53508.1| small ribosomal protein 4 [Calymperes tuamotuense] Length = 182 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + + A +++G T L+ LE RLD I++R Sbjct: 21 KISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN R VNI SY+CK D I +K + K +++ + + + Sbjct: 80 GIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKLQDFITIKDQQKYQTMIVKNTNFSPKY 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++ N ++ L + + LVVE+YSR Sbjct: 140 KIPSHLMFNSVEKKGVVNQL---LDQESIGLKINELLVVEYYSR 180 >gi|78102641|gb|ABB21534.1| small ribosomal protein 4 [Plagiochila divergens] Length = 178 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 5/180 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD + K K A V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYTCEPGDNNTIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINRE 176 >gi|42524500|ref|NP_969880.1| 30S ribosomal protein S4 [Bdellovibrio bacteriovorus HD100] gi|81697762|sp|Q6MIP0|RS4B_BDEBA RecName: Full=30S ribosomal protein S4 B gi|39576709|emb|CAE80873.1| probable 30S ribosomal protein S4 [Bdellovibrio bacteriovorus HD100] Length = 208 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 9/203 (4%) Query: 7 SKHKIDRRIGENLWGRPKS-PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K RR+ L G K+ + R Y PG HG +R+ K S F LQL KQK++ +YG + Sbjct: 8 PRFKRQRRLLTELPGMGKAGALERRPYPPGQHGLQRR-KYSEFALQLEEKQKLRFHYG-L 65 Query: 66 SEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 E++FR + +A +S+ + L++ LE RLD +V+R F +I AARQ V+H VLVN Sbjct: 66 REEQFRRLINKAKKSKATNWVEALVNLLEKRLDNVVFRLGFASSIPAARQLVSHGKVLVN 125 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN--HDNMVATFVRI 182 G+ VNIGS K GD I +K ++ Q + A Q +P +++ Sbjct: 126 GKKVNIGSQIIKVGDKITLKDEAYQNQVYMAAKQAPRLPLPSFMAKEDVAGKEQGRLTDE 185 Query: 183 PSSLKDVPYPVIMQPNLVVEFYS 205 P+ P +P LV+ +YS Sbjct: 186 PN---LEAVPFAFEPGLVIGYYS 205 >gi|184127985|gb|ACC67892.1| ribosomal protein small subunit 4 [Marattia howeana] Length = 184 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 15 QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + Sbjct: 74 ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 133 Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +D +PE+++++ + RI + + + LVVE+YSR Sbjct: 134 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 182 >gi|124021098|gb|ABM88822.1| small ribosomal protein subunit 4 [Aneura maxima] Length = 192 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR G K+P + K S + ++L KQK++ +YG ++E++ Sbjct: 3 RRPGTLPGLSSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLK 58 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I S Sbjct: 59 YVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPS 118 Query: 133 YRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 Y CK GDVI + + K + + L + ++P +++ + + + +I Sbjct: 119 YNCKPGDVITINNREKCRLVNWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WI 175 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 YLKINELLVVEYYSR 190 >gi|184127979|gb|ACC67889.1| ribosomal protein small subunit 4 [Marattia attenuata] Length = 164 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 8/166 (4%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S + ++L AKQ+++ YG ++E++ + A +++G L+ LE RLD I++R Sbjct: 1 ISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSPGQVLLQLLEMRLDNILFRLG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD- 163 PTI AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + +D Sbjct: 60 MSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQ 119 Query: 164 VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +PE+++++ + RI + + + LVVE+YSR Sbjct: 120 IPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 162 >gi|320455046|dbj|BAJ65670.1| small ribosomal protein 4 [Metzgeria nudifrons] Length = 185 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 8/192 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + ++++E ++ V P +++ + + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSTIMERLNSLQKPVIPNHLAFDSTKFSGSVNRMINR- 175 Query: 187 KDVPYPVIMQPN 198 + + Sbjct: 176 --EXIDLKINEL 185 >gi|16930532|gb|AAL31951.1| ribosomal protein small subunit 4 [Asplenium cristatum] Length = 190 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 23 QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + S Sbjct: 82 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 142 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 188 >gi|162415106|gb|ABX89127.1| ribosomal protein S4 [Tortula yuennanensis] Length = 189 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L QK++ YG I+E++ + + A +++G T L+ LE RLD +V+R Sbjct: 28 KISQYRIRLEXXQKLRFXYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRL 86 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN VNI SYRCK D I + + K +++ +++ Sbjct: 87 GMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPPDFISIXDRXKSQXXIIKNXDFSQKS 146 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP ++S + +I L + + LVVE+YSR Sbjct: 147 KVPNHLSFDFLQKKGLXNQI---LDRESIGLKIXELLVVEYYSR 187 >gi|17154710|emb|CAC83796.1| ribosomal protein S4 [Tritoniopsis unguicularis] Length = 183 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K R+G K P G L Q R K S + ++L KQK++ +YG ++E Sbjct: 1 RFKKIPRLGGLPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 56 RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185 V+I SYRCK D+I K K + A + + + ++P +++++ +I S Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175 Query: 186 LKDVPYPVIMQ 196 + + Sbjct: 176 K---WIGLKIN 183 >gi|51458082|gb|AAU03394.1| ribosomal protein small subunit 4 [Asplenium tricholepis] Length = 189 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +SE + + A ++RG T + LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQRLRFNYG-LSECQLLRYVRIARKTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN V+I SYRC D+I V+ + + L+ Sbjct: 81 VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCNPKDIITVRNRPTSCNA-LKNRS 139 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+++SV+ R+ + + LVVE+YSR Sbjct: 140 FVGYKTPDHLSVSFSEGNGPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|74273137|gb|ABA01268.1| ribosomal protein S4 [Passiflora suberosa] Length = 190 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + S + +L+ KQ+++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 29 RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAER 162 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + ++ + Sbjct: 88 GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSFPRK 147 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++ + +I + + LV+E+YSR Sbjct: 148 KLPTHLILYRKEYKGLVNQIIDRK---WVGLKINELLVIEYYSR 188 >gi|305672249|gb|ADM63548.1| ribosomal protein S4 [Forgesia racemosa] Length = 173 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR ++ Sbjct: 56 LLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRILD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K + + + ++P +++++ +I + Sbjct: 116 IPSYRCKPRDTITARDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDN 172 >gi|305672255|gb|ADM63551.1| ribosomal protein S4 [Angelica sylvestris] Length = 173 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLVNQIIDS 172 >gi|305672199|gb|ADM63523.1| ribosomal protein S4 [Dipsacus laciniatus] gi|305672269|gb|ADM63558.1| ribosomal protein S4 [Pterocephalodes hookeri] Length = 173 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G+ K P G Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGDLPGLTNKKP----RAGSDPRNQSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + ++ + ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQKSLDSSTHEELPKHLTLQSFQYKGLVNQIIDS 172 >gi|16565376|gb|AAL26203.1|AF313602_1 small ribosomal protein 4 [Osmunda banksiifolia] Length = 190 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G +N + + Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 DLPGLTNKILNPKKAQIAID-QSASKKISQFCIRLEAKQRLRFNYGS-TERQLLRYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD IV + PTI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 RKAKGSTGQVLLQLLEMRLDNIVSESGMAPTIPAARQSVNHRHILVNDHIVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193 D+ V+ ++ + + + ++ D +P+++++ + RI + + Sbjct: 119 RDITTVRDRTSSYDRITKEIESSQGDKIPDHLTLSLSEDNRPKGLVNRIVNRD---SIGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 NINELLVVEYYSR 188 >gi|118577579|gb|ABL07155.1| small ribosomal protein 4 [Piper glabrescens] Length = 148 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 5/150 (3%) Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 ++ +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VN Sbjct: 1 LRFHYG-LTERQLIRYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMTSTIPGARQLVN 59 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176 HRHVLVNGR V+I SYRCK D+I + + + V + A R ++P++++++ Sbjct: 60 HRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYK 119 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 120 GVVNQIIDSK---GVGLKINELLVVEYYSR 146 >gi|99639966|emb|CAJ45130.1| putative ribosomal protein S4 gene [Cibotium schiedei] Length = 199 Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 12/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ + K+ + Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKDLPGLTGKASNPRETRV--AADQSTSRKISQFCVRLEAKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + R + A +++G T + LE RLD I++ + TI AARQ VNHRH++VN R Sbjct: 58 RLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182 V++ SYRCK D+I V+ + + + R ++P++++ + + RI Sbjct: 117 VDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTLSLLEGNRPKGLVNRI 176 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 ---ANRESIDLNINELLVVEYYSR 197 >gi|107770438|gb|ABF83760.1| small ribosomal protein 4 [Torreya nucifera] Length = 198 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R+ L G K N+ S G + KPS + + L+ KQ+++ +YG ++E++ Sbjct: 1 INRLKT-LPGLSKQTPNSNSEESGKRKHSKPPKPSKYPVCLKEKQRLRFHYG-LTERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+ G T L+ LE RLDTI++R TI ARQ VNHRH+LVN R V+I Sbjct: 59 QYVRIARRANGPTGQVLLQLLEKRLDTIIFRLGMALTIPGARQLVNHRHILVNDRIVDIP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISV---NHDNMVATFVRIPSS 185 SYRCK D+I +K + + + + L++RD VP ++++ + +I S Sbjct: 119 SYRCKPQDLISIKDQQRSRNIINKNIDLSQRDKIWVPNHLNLKKKKKSQYIGLVKKIVDS 178 Query: 186 LKDVPYPVIMQPNLVVEFYS 205 + + + LVVE+YS Sbjct: 179 KR---ISLKINELLVVEYYS 195 >gi|289576438|dbj|BAI77793.1| ribosomal protein small subunit 4 [Hymenophyllum sp. Schuettpeltz 283] Length = 195 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 10/199 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ + K + Q K S F ++L AKQ+++ YG +E++ Sbjct: 1 IRRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I Sbjct: 58 RYVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGLSATIPAARQLVNHRHILVNNHIVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLK 187 SYRCK D+I V+ + + E + R +P++++ + I Sbjct: 118 SYRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---AN 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 RESIDLNINELLVVEYYSR 193 >gi|99639995|emb|CAJ45136.1| putative ribosomal protein S4 gene [Cyathea parvula] Length = 199 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR+ Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKTSNPGETRTAAD----QSVSRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R ++P++++ + + Sbjct: 115 RIVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTISLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|184128077|gb|ACC67938.1| ribosomal protein small subunit 4 [Psilotum nudum] Length = 183 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + L+L AKQ+++ YG ++E++ A ++RG T L+ LE RLD Sbjct: 14 QSTSKKRSQYSLRLEAKQRLRFNYG-VTERQLLKYVCIAKKARGSTGQVLLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN + V+I SYRCK D+I V+ K + + Sbjct: 73 IIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSYRCKPNDIITVRDHQKSQELIKRNIK 132 Query: 159 LAE-RDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 LA+ ++P +++ + +I + + LVVE+YSR Sbjct: 133 LAKIDEIPSHLNISYLEETKPKGFINKIVDRG---SIGLEINELLVVEYYSR 181 >gi|117306740|emb|CAH73338.1| ribosomal protein S4 [Hampeella alaris] Length = 183 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G +S +K S + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 GLTNKIPQLKSNSINQSTSTKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 KGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 I VK + + +++ +P ++ + +I L + + L Sbjct: 118 IIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI---LDRESIGLKINELL 174 Query: 200 VVEFYSR 206 VVE+YSR Sbjct: 175 VVEYYSR 181 >gi|51458095|gb|AAU03399.1| ribosomal protein small subunit 4 [Asplenium myriophyllum] Length = 190 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 23 QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + S Sbjct: 82 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 142 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 188 >gi|305672197|gb|ADM63522.1| ribosomal protein S4 [Schefflera monticola] gi|305672209|gb|ADM63528.1| ribosomal protein S4 [Polyscias guilfoylei] gi|305672215|gb|ADM63531.1| ribosomal protein S4 [Tetraplasandra oahuensis] gi|305672233|gb|ADM63540.1| ribosomal protein S4 [Cussonia spicata] gi|305672325|gb|ADM63586.1| ribosomal protein S4 [Pseudopanax colensoi] gi|305672349|gb|ADM63598.1| ribosomal protein S4 [Aralia spinosa] Length = 173 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + + + + D +P++++++ +I S Sbjct: 116 IASYRCKPRDIITARDEENSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|305672381|gb|ADM63614.1| ribosomal protein S4 [Valdivia gayana] Length = 173 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR ++ Sbjct: 56 LLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRILD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K + + + ++P +++++ +I Sbjct: 116 IPSYRCKPRDTITARDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDK 172 >gi|305672203|gb|ADM63525.1| ribosomal protein S4 [Desfontainia spinosa] Length = 173 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK+ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLCFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K A + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSFDSSPHEELPKHLTLHPFQYKGLVNKIIDS 172 >gi|99639901|emb|CAJ45121.1| putative ribosomal protein S4 gene [Alsophila bryophila] gi|99639957|emb|CAJ45128.1| putative ribosomal protein S4 gene [Cibotium glaucum] gi|99639962|emb|CAJ45129.1| putative ribosomal protein S4 gene [Cibotium nealiae] Length = 199 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ + K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKDLPGLTGKASNPGETRVAAD----QSTSRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH++VN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R +P++++ + + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLTLSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|45271092|gb|AAS56930.1| ribosomal protein small subunit 4 [Hymenasplenium unilaterale] Length = 190 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 23 QSTSRKISQFCIRLEAKQRLRFNYG-LTERQLLRYVRIARKTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L+ Sbjct: 82 VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDIITVRNRPTSC-NALKGES 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + P++++V D + + + LVVE+YSR Sbjct: 141 LGGDETPDHLTVSLSEGDRPTGLVNHV---ANRESVNLNINELLVVEYYSR 188 >gi|320455038|dbj|BAJ65666.1| small ribosomal protein 4 [Metzgeria caledonica] Length = 185 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTNKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186 V+I SY CK GD+I +K + + ++++E ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCKLGDIITIKNQKRNRSNIMETLNSVQKPGIPNHLAFDSTKFIGSVNQMINR- 175 Query: 187 KDVPYPVIMQPN 198 + + Sbjct: 176 --EXIDLEINEL 185 >gi|78102711|gb|ABB21569.1| small ribosomal protein 4 [Plagiochila propinqua] Length = 175 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SY C+ GD+I ++ K K + V + L ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNINLFQKLKIPSHLTFDSTQLRGSVNQMINR 175 >gi|184128081|gb|ACC67940.1| ribosomal protein small subunit 4 [Helminthostachys zeylanica] Length = 170 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQK++ +G ++E++ + A R+ G T + LE RLD Sbjct: 1 QSISRKISQYCIRLEAKQKLRFNHG-LTERQLLKYVRTARRASGSTGQVSLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157 I++R PTI ARQ VNHRH+LVN R V+I SY CK DVI V+ ++ + + Sbjct: 60 IIFRLGISPTIPGARQLVNHRHILVNDRIVDIPSYHCKANDVITVRDQNNSRNLIGKDVG 119 Query: 158 QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 AE +P ++S+ D + R+ + + L+VE+YSR Sbjct: 120 SSAEGRIPNHLSLSLSEDDKLKGFVNRMIDR---ESIGLKVNELLIVEYYSR 168 >gi|51458103|gb|AAU03403.1| ribosomal protein small subunit 4 [Asplenium marinum] Length = 190 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 23 QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + S Sbjct: 82 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 142 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 188 >gi|289576420|dbj|BAI77784.1| ribosomal protein small subunit 4 [Hymenophyllum frankliniae] Length = 190 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G +N R Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 DLPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 RKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPV 193 D+I V+ + + E + ++R +P++++ + I + Sbjct: 119 KDLITVRNRPSSYSGSKENIEFSQRKKIPDHLTFSFSEDNRPKGLVNGI---ANRESIDL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 NINELLVVEYYSR 188 >gi|305672251|gb|ADM63549.1| ribosomal protein S4 [Pseudonemacladus oppositifolius] Length = 170 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KSP R+ Q K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKSPKAVRN-------QLGSGKKSQYRIRLEEKQKLRFHYG-LTERQ 52 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 53 LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 112 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I K + K A + + + +++ +++ + +I S Sbjct: 113 IPSYRCKPRDTITAKDERKSKALIQNSLDSSPHKELANHLTFDPVQYKGLVNQIIDS 169 >gi|86438882|emb|CAJ55418.1| small ribosomal protein 4 [Plagiochila crozetensis] Length = 176 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 7/182 (3%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G + ++S + K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKALKSKSSY--IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLKYMRIAR 57 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I SY C+ G Sbjct: 58 KAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPG 117 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++ K K + + + ++ +P +++ + + + ++ + + + Sbjct: 118 DIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR---EWINLKINE 174 Query: 198 NL 199 L Sbjct: 175 LL 176 >gi|305672355|gb|ADM63601.1| ribosomal protein S4 [Heteromorpha arborescens var. abyssinica] Length = 173 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGSLPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + ++ ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSSQEELPKHLTLQPFQYKGLVNQIIDS 172 >gi|305672331|gb|ADM63589.1| ribosomal protein S4 [Myodocarpus crassifolius] Length = 173 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMATTIPGARQLVNHRHILVNGGIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I K + + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITAKDEQNSRVLIQNSLDSSSHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|51860565|gb|AAU11419.1| ribosomal protein small subunit 4 [Ephedra distachya subsp. helvetica] Length = 197 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 14/203 (6%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEK 68 KI RR+ K P + +H R K S + + L+ KQK++ +YG ++E+ Sbjct: 1 KIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V Sbjct: 56 QLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIP 183 +I SYRCK D+I +K K + + + VP Y++ N +I Sbjct: 116 DIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKII 175 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + ++ LV+E+YSR Sbjct: 176 DTKD---LQLKIKEMLVIEYYSR 195 >gi|99640030|emb|CAJ45143.1| putative ribosomal protein S4 gene [Lophosoria quadripinnata] Length = 199 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH++VN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R ++P++++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|305672227|gb|ADM63537.1| ribosomal protein S4 [Donatia fascicularis] Length = 173 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNDRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I + + K A + + + ++P +++++ +I S Sbjct: 116 IPSYRCKPRDTITARDEQKSRALIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172 >gi|124021086|gb|ABM88816.1| small ribosomal protein subunit 4 [Aneura pinguis] Length = 187 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K+P + + K S + ++L KQK++ +YG ++E++ Sbjct: 1 GTLPGLTSKTPGSKVGFSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVF 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I SY C Sbjct: 57 TARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNC 116 Query: 136 KEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K GDVI + + K + + L + ++P +++ + + + +I + Sbjct: 117 KPGDVITINNREKCRLENWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLK 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|99639985|emb|CAJ45134.1| putative ribosomal protein S4 gene [Cyathea arborea] Length = 198 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%) Query: 9 HKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K+ RR+ K+ P TR+ Q K S F ++L AKQ+++ YG ++ Sbjct: 1 LKVIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R Sbjct: 56 ERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDR 114 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVR 181 V++ SYRCK D+I V+ + + + R ++P++++ + R Sbjct: 115 IVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVNR 174 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 175 I---ANRESIELNINELLVVEYYSR 196 >gi|23477318|gb|AAN34635.1| ribosomal protein small subunit 4 [Hymenasplenium cheilosorum] Length = 185 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 18 QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + S Sbjct: 77 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 136 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 137 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 183 >gi|87311708|ref|ZP_01093824.1| 30S ribosomal protein S4 [Blastopirellula marina DSM 3645] gi|87285602|gb|EAQ77520.1| 30S ribosomal protein S4 [Blastopirellula marina DSM 3645] Length = 188 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 6/182 (3%) Query: 25 SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 + R+ PG+H R +PS +G L KQK+K YYG + E++ R F+ A +G+T Sbjct: 13 KGYDRRATPPGMH--TRPRRPSNYGAALMEKQKIKHYYG-LGERQLRRYFEMAKHMKGNT 69 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L+ E RLD +V R+ T ARQ + H H LVNG V+ S++ + GDV+ V+ Sbjct: 70 GEQLLVLCERRLDNVVRRSGMALTRPQARQGIVHGHFLVNGAKVDKPSFQMRPGDVVSVR 129 Query: 145 QKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 + K V E++S + + + A+F IP++ DV PV + +VVEF Sbjct: 130 NREKLQILYRSILGENGSQVAEFVSSDQETLSASFDSIPTAG-DVSLPVDVN--MVVEFM 186 Query: 205 SR 206 SR Sbjct: 187 SR 188 >gi|170516221|gb|ACB15112.1| small ribosomal protein 4 [Tetraclinis articulata] Length = 200 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ K+P R P + KPS + ++L+ KQ+++ +YG + E Sbjct: 1 RLKIISRLKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 58 RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRI 182 V+I SYRCK D+I +K+K + + ++ ++D VP +++ +I Sbjct: 118 VDIPSYRCKPHDLISIKEKEGLRNIIKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 178 IDNKR---IGLKINELLVVEYYSR 198 >gi|117306736|emb|CAH73336.1| ribosomal protein S4 [Glyphothecium sciuroides] Length = 183 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 TKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K K + + ++ +P +++ + +I L + + Sbjct: 117 FIIIKNKQNSEVVINKNKDFYQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLRINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|78102629|gb|ABB21528.1| small ribosomal protein 4 [Plagiochila bicornuta] Length = 172 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 5/176 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFHLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 V+I SY C+ GD+I +K K K + V + ++ +P +++ + + A+ ++ Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIVAKNINSFQKLKIPSHLTFDSTQLRASVNQM 172 >gi|99640060|emb|CAJ45149.1| putative ribosomal protein S4 gene [Sphaeropteris tomentosissima] Length = 199 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R ++P++++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|255020792|ref|ZP_05292850.1| SSU ribosomal protein S4p (S9e) [Acidithiobacillus caldus ATCC 51756] gi|254969788|gb|EET27292.1| SSU ribosomal protein S4p (S9e) [Acidithiobacillus caldus ATCC 51756] Length = 159 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 64/163 (39%), Positives = 94/163 (57%), Gaps = 5/163 (3%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S +G QLR KQK+++ YG + E +FR F+ A ++RG T L+ FLE RLD + YR Sbjct: 1 MSEYGTQLREKQKIRRIYGVL-EGQFRRYFERASQTRGVTGELLLRFLELRLDNVAYRLG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERD 163 + + ARQ V H H+ VNGR V+I SY+ + GDV+ V + ++Q A +L A R Sbjct: 60 YGSSRAEARQVVRHGHITVNGRRVDIPSYQVRAGDVVAVAESARQHARILAAVEAAAARG 119 Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PE++SV+ N+ AT +P P + +VVE YS+ Sbjct: 120 FPEWLSVDSANLQATVKAVPVREDMAP---DLNEQVVVELYSK 159 >gi|157689428|gb|ABV65270.1| ribosomal protein S4 [Bruguiera gymnorhiza] Length = 148 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 5/150 (3%) Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 M+ +YG ++E++ + A +++G T L+ +E RLD I++R TI ARQ VN Sbjct: 1 MRFHYG-LTERQLLKYVRIAAKAKGSTGQVLLQLVEMRLDNILFRLGMASTIPRARQLVN 59 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMV 176 HRH+LVNGR V+I SYRCK D+I + + K + + ++P +++++ Sbjct: 60 HRHILVNGRIVDIPSYRCKPRDIITARDEQKSRTMIQNYLDSFPQEELPNHLTLHPFQYK 119 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 120 GLVNQIIDSK---WVVLKINELLVVEYYSR 146 >gi|305672375|gb|ADM63611.1| ribosomal protein S4 [Hydrocotyle vulgaris] Length = 173 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTTKRP----RVGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I K + + + D +P++++++ +I S Sbjct: 116 IASYRCKPRDIITAKDEENSRTLIQNYLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|117306732|emb|CAH73334.1| ribosomal protein S4 [Ptychomnion ptychocarpon] Length = 183 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 AKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + + + + ++ +P +++ + +I L + + Sbjct: 117 FIIIKNQQNFEIVINKNTDFYQKYKIPNHLTYSSLEKKGLVNKI---LDRESIGLKINEL 173 Query: 199 LVVEFYSR 206 LVVE+YSR Sbjct: 174 LVVEYYSR 181 >gi|99640001|emb|CAJ45137.1| putative ribosomal protein S4 gene [Cyathea speciosa] Length = 198 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%) Query: 9 HKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K+ RR+ K+ P TR+ Q K S F ++L AKQ+++ YG ++ Sbjct: 1 LKVIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R Sbjct: 56 ERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDR 114 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVR 181 V++ SYRCK D+I V+ + + + R ++P++++ + R Sbjct: 115 IVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVDR 174 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 175 I---ANRESIDLNINELLVVEYYSR 196 >gi|305672307|gb|ADM63577.1| ribosomal protein S4 [Triosteum perfoliatum] Length = 167 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P++ Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTKKGPID----------QSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 50 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + +P+++++ +I S Sbjct: 110 IPSYRCKPQDIITARDEQNSRALIQNSLDSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166 >gi|289576424|dbj|BAI77786.1| ribosomal protein small subunit 4 [Hymenophyllum minimum] Length = 194 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K + Q K S F ++L AKQ+++ YG +E++ Sbjct: 1 RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I S Sbjct: 58 YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNNIVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188 YRCK D+I V+ + + E + R +P++++ + RI Sbjct: 118 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNRI---ANR 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 ESIDLNINELLVVEYYSR 192 >gi|107770436|gb|ABF83759.1| small ribosomal protein 4 [Torreya grandis] Length = 198 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R+ L G K N G + KPS + + L+ KQ+++ +YG ++E++ Sbjct: 1 INRLKT-LPGLSKKTPNRIIEKSGKRKHSKPPKPSKYPVCLKEKQRLRFHYG-LTERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+ G T L+ LE RLDTI++R TI ARQ VNHRH+LVN R V+I Sbjct: 59 QYVRIARRANGPTGQVLLQLLEMRLDTIIFRLGMALTIPGARQLVNHRHILVNDRIVDIP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDV---PEYISVNHDNMV---ATFVRIPSS 185 SYRCK D+I +K + + + + L++RD P +++ +I S Sbjct: 119 SYRCKPQDLISIKDQQRSRNIINKNIDLSQRDKIWGPNHLNFLKKKKSQYIGLVKKIVDS 178 Query: 186 LKDVPYPVIMQPNLVVEFYS 205 + + + LVVE+YS Sbjct: 179 KR---ISLKINELLVVEYYS 195 >gi|305672201|gb|ADM63524.1| ribosomal protein S4 [Tetrapanax papyrifer] Length = 173 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + + + + ++P++++++ +I S Sbjct: 116 IASYRCKPRDIITARDEENSRTLIQNSLDSSSYDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|289576436|dbj|BAI77792.1| ribosomal protein small subunit 4 [Hymenophyllum perrieri] Length = 195 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K + Q K S F ++L AKQ+++ YG +E++ Sbjct: 2 RRLKDLPGLTNKKLNVKEARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 58 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I S Sbjct: 59 YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPS 118 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188 YRCK D+I V+ + + E + R +P++++ + I Sbjct: 119 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESIDLNINELLVVEYYSR 193 >gi|124021084|gb|ABM88815.1| small ribosomal protein subunit 4 [Aneura mirabilis] Length = 192 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 8/196 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR K+P K S + ++L KQK++ +YG ++E++ Sbjct: 2 IRRQATLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A ++G T L+ LE RLD ++R VPTI AARQ VNHRHV +N ++I Sbjct: 58 KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190 SY CK GDVI + + K ++ ++P +++ + + + +I Sbjct: 118 SYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 174 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 IDLKINELLVVEYYSR 190 >gi|305672303|gb|ADM63575.1| ribosomal protein S4 [Columellia oblonga] Length = 173 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K A + + + ++P+++++ A+ +I S Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSLDSSPPEELPKHLALQPFQYKASVNQIIDS 172 >gi|52788815|gb|AAU87381.1| ribosomal protein small subunit 4 [Saccoloma inaequale] Length = 193 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ NL G N ++ Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 IRRLK-NLPGLTGETSNLGETRV-VNDQSGSKKISQFCVRLEAKQRLRFSYG-LTERQPL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +++G T + LE RLD +++ TI AARQ VNHRH+LVN R V+I Sbjct: 58 NYVRIARKTKGSTGQVSLQLLEMRLDNVIFHPGVASTIPAARQLVNHRHILVNNRIVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKD 188 SYRC+ D+I V+ + ++VL + +P+++++ RI Sbjct: 118 SYRCEPKDIITVRNRPTS-SNVLRNASFGRDKIPDHLTLSLTEGSRPTGLVNRI---ANR 173 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 ESVDLNINELLVVEYYSR 191 >gi|260222204|emb|CBA31533.1| 30S ribosomal protein S4 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 137 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 57/137 (41%), Positives = 82/137 (59%), Gaps = 11/137 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K+ +++ PG HG+ ++ S +GLQLR Sbjct: 1 MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 KQK+K+ YG + E++FR F EADR RG+T NL+ LESRLD +VYR F T AR Sbjct: 58 EKQKVKRMYGVL-ERQFRRYFAEADRRRGNTGANLMVLLESRLDNVVYRMGFGSTRAEAR 116 Query: 114 QFVNHRHVLVNGRSVNI 130 Q V+H+ + VNG V Sbjct: 117 QLVSHKAITVNGNPVTF 133 >gi|51860461|gb|AAU11367.1| ribosomal protein small subunit 4 [Gnetum gnemon] Length = 195 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 10/200 (5%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 KI RR+ K P + R K S L+ KQK++ ++G ++E++ Sbjct: 1 KIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSQHLACLQEKQKIRFHFG-LTERQ 56 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 R + A + +G T L+ LE RLD I+Y+ TI ARQ VNHRH+LVN VN Sbjct: 57 LRQYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLAGTIPGARQLVNHRHILVNDYVVN 116 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSL 186 I SYRCK DVI +K K+ + ++ E+ +P +++++ +I Sbjct: 117 IPSYRCKPQDVITIKGKNPDQLKTIITRNRNKAREKKIPYHLTLDLSQNKGIVNKIIDRK 176 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 177 D---IQLNIKEMLVIEYYSR 193 >gi|325973258|ref|YP_004250322.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois] gi|325989693|ref|YP_004249392.1| 30S ribosomal protein S4 [Mycoplasma suis KI3806] gi|323574778|emb|CBZ40438.1| 30S ribosomal protein S4 [Mycoplasma suis] gi|323651860|gb|ADX97942.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois] Length = 202 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 102/206 (49%), Gaps = 10/206 (4%) Query: 1 MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ +K R+ G + + GR S R YGPG HG + K S G QLR KQK+ Sbjct: 1 MSRYLGPLYKKSRQHGFSFYEDGREFSKGKQREYGPGQHGPTKFKKLSLHGEQLREKQKL 60 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 YG + EK+ R FK A + G + N + LES+LD +V+RA T AARQ + H Sbjct: 61 AILYG-LREKQMRRFFKMAQKMPGSLALNFLILLESKLDNLVFRAGMANTRRAARQLIVH 119 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178 H+ +NG+ V+I SY VIEV +KS+ + V + +I ++H A Sbjct: 120 GHIRLNGKKVDIPSYVVPPSSVIEVAEKSRDIPVV---NYFKHFTPLPFIQLDH-KYRAV 175 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFY 204 ++R P + + + E+Y Sbjct: 176 YLRYPERSE---MNLELNEVFATEWY 198 >gi|305672253|gb|ADM63550.1| ribosomal protein S4 [Lonicera japonica] Length = 167 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P+ GQ R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTKKGPI----------GQSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 50 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + +P+++++ +I S Sbjct: 110 IPSYRCKPRDIITARDEQNSRALIQNSLNSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166 >gi|99640006|emb|CAJ45138.1| putative ribosomal protein S4 gene [Dicksonia arborescens] gi|99640011|emb|CAJ45139.1| putative ribosomal protein S4 gene [Dicksonia gigantea] gi|99640020|emb|CAJ45141.1| putative ribosomal protein S4 gene [Dicksonia thyrsopteroides] Length = 199 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + + R ++P +++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGTNESSRGDEIPNHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|46811032|gb|AAT01834.1| small ribosomal protein 4 [Monoclea gottschei subsp. elongata] Length = 179 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R Sbjct: 10 INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 68 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R V T+ ARQ VNHRH+L+N V+I SY CK DVI +K + K + + + Sbjct: 69 LDNILFRLGMVLTVPGARQLVNHRHILINNNMVDIPSYNCKPKDVITIKDRPKSQSIITK 128 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P ++S + + ++ + + LVVE+YSR Sbjct: 129 NLNSFQKSKIPNHLSFDLMQVKGLVNQMIDR---ESILLKINELLVVEYYSR 177 >gi|18027944|gb|AAL55896.1| ribosomal protein S4 [Onychium japonicum] Length = 191 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSVLKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRCK D+I ++ ++ +V + Sbjct: 83 IIFRLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDIITIRNRTTSH-NVAKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +A +P++++++ ++ + + LVVE+YSR Sbjct: 142 IAGGGIPDHLTLSLSKTGEPAGLVNQM---ANRESVDLDINELLVVEYYSR 189 >gi|99640055|emb|CAJ45148.1| putative ribosomal protein S4 gene [Sphaeropteris novaecaledoniae] Length = 199 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R ++P++++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|63101027|gb|AAY33138.1| small ribosomal protein 4 [Leptohymenium tenue] Length = 151 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 5/153 (3%) Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQK++ +YG I+E++ + + A +++G T L+ +E RLD +++R PTI ARQ Sbjct: 1 KQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLIEMRLDNVIFRLGMAPTIPGARQ 59 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173 VNHRH+LVN V+I SYRCK D I +K + K + + + ++ +P +++ + Sbjct: 60 LVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSL 119 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 120 EKKGLVNQI---LDRESIGLKINELLVVEYYSR 149 >gi|171473924|gb|AAX24501.3| SJCHGC09636 protein [Schistosoma japonicum] Length = 139 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 3/141 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ K RR+ +L G K+ R + PG HG+ R + Y QL+ KQK + Sbjct: 1 MARYTGPITKKSRRLKTDLVGGDKN-FEMRPFPPGQHGRGRVQEKEYL-TQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+F +KEA R +G T NL+ LESRLD++VYRA T ARQ V H H Sbjct: 59 TYG-VMEKQFVRYYKEAARRQGKTGENLLVILESRLDSVVYRAGLARTRRGARQMVTHGH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVI 141 VNG+ V++ SYR ++ D+I Sbjct: 118 FEVNGKRVDVPSYRVEQYDII 138 >gi|305672213|gb|ADM63530.1| ribosomal protein S4 [Phyllonoma laticuspis] Length = 173 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P + Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKVRRLGALPGLTNKRP----RTVNDIRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I S+RCK D+I + + K +A + ++ + + VP++++++ +I S Sbjct: 116 IPSFRCKPRDIITTRDEQKSIARIQKSLDSSPHEAVPKHLTLHPLQYKGLVNQIIDS 172 >gi|289576434|dbj|BAI77791.1| ribosomal protein small subunit 4 [Hymenophyllum kuhnii] Length = 195 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K + Q K S F ++L AKQ+++ YG +E + Sbjct: 2 RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TEHQLLK 58 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I S Sbjct: 59 YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPS 118 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188 YRCK D+I V+ + + E + R +P++++ + I Sbjct: 119 YRCKPKDLITVRNRPSSYSGSKEKIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESIDLNINELLVVEYYSR 193 >gi|14090460|gb|AAK53515.1| small ribosomal protein 4 [Exostratum blumei] Length = 182 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + + A + +G T L+ LE RLD I++R Sbjct: 21 KISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRL 79 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN VNI SY+CK D I +K + K + + + + Sbjct: 80 GLAPTIPGARQLVNHRHILVNNLIVNIPSYQCKPQDFITIKDQKKYQKMITKNTNFFPKY 139 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P ++ N +I L + + LVVE+YSR Sbjct: 140 KTPNHLIFNSVEKKGLVNQI---LDQEAIGLKINELLVVEYYSR 180 >gi|51458125|gb|AAU03412.1| ribosomal protein small subunit 4 [Diellia erecta] gi|51458127|gb|AAU03413.1| ribosomal protein small subunit 4 [Diellia falcata] gi|51458130|gb|AAU03414.1| ribosomal protein small subunit 4 [Diellia pallida] gi|51458132|gb|AAU03415.1| ribosomal protein small subunit 4 [Diellia unisora] gi|51458134|gb|AAU03416.1| ribosomal protein small subunit 4 [Diellia x lauii] Length = 185 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 18 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 77 VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPTDFITVRNRPTSCNAMKNKSL 136 Query: 159 LAERDVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V+ D + + + LVVE+YSR Sbjct: 137 VGDKT-PDHLTVSLSGGDRPTGLVNGV---ANRESINLNINELLVVEYYSR 183 >gi|99640015|emb|CAJ45140.1| putative ribosomal protein S4 gene [Dicksonia squarrosa] Length = 199 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + + R ++P +++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGTNESSRGDEIPNHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I + + LVVE+YSR Sbjct: 175 QI---ANRESIDLNINELLVVEYYSR 197 >gi|219973352|gb|ACL68562.1| ribosomal protein small subunit 4 [Marsilea mexicana] Length = 187 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVNGR V++ SYRC+ Sbjct: 56 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNGRIVDVPSYRCEPQ 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 116 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 172 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 173 NINELLIVEYYSR 185 >gi|165979144|gb|ABY77015.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979146|gb|ABY77016.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979150|gb|ABY77018.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979152|gb|ABY77019.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979154|gb|ABY77020.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979156|gb|ABY77021.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979158|gb|ABY77022.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979160|gb|ABY77023.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979162|gb|ABY77024.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979164|gb|ABY77025.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979166|gb|ABY77026.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] gi|165979168|gb|ABY77027.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] Length = 188 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 140 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 186 >gi|219973432|gb|ACL68602.1| ribosomal protein small subunit 4 [Marsilea polycarpa] gi|219973434|gb|ACL68603.1| ribosomal protein small subunit 4 [Marsilea polycarpa] Length = 188 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S F ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSVLEGNKPKGVVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|99639907|emb|CAJ45122.1| putative ribosomal protein S4 gene [Alsophila capensis] Length = 199 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R +P++++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ASRESIDLNINELLVVEYYSR 197 >gi|78102679|gb|ABB21553.1| small ribosomal protein 4 [Plagiochila korthalsiana] Length = 172 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 5/176 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKXVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHIAINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 VNI SY C+ GD+I + K K + V + ++ +P +++ + + + ++ Sbjct: 117 VNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSVSQM 172 >gi|18027936|gb|AAL55892.1| ribosomal protein S4 [Actiniopteris australis] Length = 191 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+ ++ Q K S F ++L AKQ+++ YG ++E++ + A Sbjct: 3 LPGLVGKNKMSNSGEFRVASDQSVSKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIA 61 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 ++RG T + LE RLD I++R TI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 62 RKTRGSTGQVPLQLLEMRLDNIIFRLGMASTIPAARQLVNHRHILVNYRIVDIPSYRCKP 121 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194 D+I ++ ++ +V + + +P++++++ + + + Sbjct: 122 RDIITIRNRTTSH-NVSKVESIPGGGIPDHLTLSFSKTGELAGLVNHM---ANRESIDLD 177 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 178 INELLVVEYYSR 189 >gi|80974148|gb|ABB53767.1| small ribosomal subunit protein 4 [Garovaglia baeuerlenii] Length = 176 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T + E RLD Sbjct: 10 STSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVSLQLPEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SYRCK D I VK + + + Sbjct: 69 IIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQDFIIVKNEKNSEGIINKDGD 128 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ ++ L + + LVVE+YSR Sbjct: 129 FHQKYKIPNHLTYIFLEKKGLVNKL---LDRESIGLKINELLVVEYYSR 174 >gi|305672185|gb|ADM63516.1| ribosomal protein S4 [Leycesteria formosa] Length = 167 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P++ Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTKKGPID----------QSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 50 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + +P+++++ +I S Sbjct: 110 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166 >gi|80974142|gb|ABB53764.1| small ribosomal subunit protein 4 [Euptychium mucronatum] Length = 168 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R D Sbjct: 2 STSNKKISQYRIRLEEKQKLRFHYG-ITEQQLLNYVRIARKTKGSTGEVLLQLLEMRSDN 60 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN VNI SYRCK D I VK + + + Sbjct: 61 IIFRLGMAPTISGARQLVNHRHILVNDCIVNIPSYRCKPQDFIIVKNEKNSEGIINKNGD 120 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ +I L + + LVVE+YSR Sbjct: 121 FHQKSKIPNHLTYIFLEKKGLVNKI---LDRESIGLKINELLVVEYYSR 166 >gi|305672345|gb|ADM63596.1| ribosomal protein S4 [Symphoricarpos sp. Donoghue & Winkworth 28] Length = 167 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P++ Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTQKGPID----------QSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 50 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + +P+++++ +I S Sbjct: 110 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166 >gi|51458099|gb|AAU03401.1| ribosomal protein small subunit 4 [Asplenium lunulatum] Length = 189 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 22 QSISKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + + L Sbjct: 81 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LGDKS 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P++++V D R+ + + LVVE+YSR Sbjct: 140 FVRDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 187 >gi|184127995|gb|ACC67897.1| ribosomal protein small subunit 4 [Marattia salicifolia] Length = 159 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 8/161 (4%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD I++R PTI Sbjct: 1 IRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTI 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYI 168 AARQ VNHRH+LVN R V+I SYRCK D+I V+ ++ V + + +D +PE++ Sbjct: 60 PAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHL 119 Query: 169 SVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++ + RI + + + LVVE+YSR Sbjct: 120 TLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 157 >gi|51458201|gb|AAU03447.1| ribosomal protein small subunit 4 [Asplenium cuneatiforme] Length = 189 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 22 QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ PTI AARQ VNHRH+ VN V+I SYRCK D I V+ + ++ + Sbjct: 81 VLFHLGMAPTIPAARQLVNHRHISVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRKK-S 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++V D R+ + + LVVE+YSR Sbjct: 140 LVGGKTPDHLTVSLAEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|305672339|gb|ADM63593.1| ribosomal protein S4 [Argophyllum laxum] Length = 173 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 6/176 (3%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 2 KIRRLGALPGLTNKRP----RAGSALRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I Sbjct: 57 LKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 SYRCK D I + + K A + + + ++P ++++ +I +S Sbjct: 117 PSYRCKPRDTITARNEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIINS 172 >gi|305672195|gb|ADM63521.1| ribosomal protein S4 [Pittosporum undulatum] Length = 173 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+ Sbjct: 56 LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + D +P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNYLDSSPHDELPKHLTLHPFQYKGLVNQIIDS 172 >gi|305672281|gb|ADM63564.1| ribosomal protein S4 [Coriandrum sativum] Length = 173 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + + + ++P+++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLVNQIIDS 172 >gi|18028084|gb|AAL55966.1| ribosomal protein S4 [Jamesonia imbricata] Length = 191 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189 >gi|51458144|gb|AAU03421.1| ribosomal protein small subunit 4 [Asplenium formosum] Length = 192 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 25 QSTSRKNLQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ ++ ++ S Sbjct: 84 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDSITVRNRATSCNALRNKSV 143 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 144 VGDKT-PDHLTVSLSEDDRPTGLVNRV---ANRESINLNINELLVVEYYSR 190 >gi|51458150|gb|AAU03424.1| ribosomal protein small subunit 4 [Asplenium heterochroum] Length = 189 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A +RG T + LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARGTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ ++ + L Sbjct: 81 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRATSCNA-LGNKS 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++V D R+ + + LVVE+YSR Sbjct: 140 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|289576408|dbj|BAI77778.1| ribosomal protein small subunit 4 [Hymenophyllum tunbrigense] Length = 194 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K + Q K S F ++L AKQ+++ YG +E++ Sbjct: 1 RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+ VN V+I S Sbjct: 58 YVRVARKAKGSTGQILLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188 YRCK D+I V+ + + E + R +P++++ + I Sbjct: 118 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 ESIDLNINELLVVEYYSR 192 >gi|51458105|gb|AAU03404.1| ribosomal protein small subunit 4 [Asplenium aegaeum] Length = 192 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 25 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + S Sbjct: 84 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRDKSL 143 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 144 VGDKT-PDHLTVSLLEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 190 >gi|37992585|gb|AAR06471.1| small ribosomal protein 4 [Lindigia debilis] Length = 173 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 4 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMR 62 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D + +K + K + + Sbjct: 63 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFVTIKNQRKSENIINK 122 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ +P +++ + +I L + + VVE+YSR Sbjct: 123 NMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESXGLKINELXVVEYYSR 171 >gi|289576432|dbj|BAI77790.1| ribosomal protein small subunit 4 [Hymenophyllum tunbrigense] Length = 195 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K + Q K S F ++L AKQ+++ YG +E++ Sbjct: 2 RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 58 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+ VN V+I S Sbjct: 59 YVRVARKAKGSTGQILLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPS 118 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188 YRCK D+I V+ + + E + R +P++++ + I Sbjct: 119 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESIDLNINELLVVEYYSR 193 >gi|254444170|ref|ZP_05057646.1| S4 domain protein [Verrucomicrobiae bacterium DG1235] gi|198258478|gb|EDY82786.1| S4 domain protein [Verrucomicrobiae bacterium DG1235] Length = 144 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%) Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR F++A +RG T + LE+RLD+IVY F T AARQFVNH H Sbjct: 1 MYG-LMEKQFRRTFEQAKATRGVTGTIFLQLLETRLDSIVYDLGFTKTRKAARQFVNHGH 59 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179 + VNG+ V+I SY+ K GD IEV+ + + R+VP++++ D Sbjct: 60 ISVNGQKVDIPSYQVKVGDEIEVRNTTSSRQLATRNMEANRLRNVPDWLTRQDDAFRGVV 119 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R P+ + P + L+VEFYSR Sbjct: 120 NREPTREELEP---SINEQLIVEFYSR 143 >gi|254995579|emb|CAO82748.1| ribosomal protein S4 [Lycopodium jussiaei] Length = 172 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L K K++ YG ++E+ + A +++G T L+ LE RLD Sbjct: 6 STPSKKVSQYCIRLEEKXKLRFXYG-LTEQXLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNH+H+LVN R++N+ SYRCK D+I + + + A + + ++ Sbjct: 65 IIFRLGMAPTIPGARQMVNHKHILVNNRAINVPSYRCKPKDIIATRDRPESRAIIAKNNK 124 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++++ +I + + LVVE+YSR Sbjct: 125 FSHTYKIPNHLTLQXLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170 >gi|219973390|gb|ACL68581.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973392|gb|ACL68582.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973394|gb|ACL68583.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973396|gb|ACL68584.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973398|gb|ACL68585.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973400|gb|ACL68586.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973402|gb|ACL68587.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973404|gb|ACL68588.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973406|gb|ACL68589.1| ribosomal protein small subunit 4 [Marsilea mutica] gi|219973506|gb|ACL68639.1| ribosomal protein small subunit 4 [Marsilea mutica] Length = 188 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S F ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQFCVRLEAKQRLRFNYG-VTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPKGVVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|8650430|gb|AAF78207.1| small ribosomal protein 4 [Equisetum bogotense] Length = 187 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 8/189 (4%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 V ++ Q + K S +G++L AKQ+++ YG ++E++ + + A ++ Sbjct: 1 LTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARGAK 59 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 G T L+ LE RLD I++R FVPTI +ARQ +NHRH+LVN R V++ S+ CK D+I Sbjct: 60 GSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDII 119 Query: 142 EVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQP 197 + + + + + A+ +PE++++ + + + + Sbjct: 120 TIGAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|305672191|gb|ADM63519.1| ribosomal protein S4 [Delarbrea harmsii] Length = 173 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+ Sbjct: 56 LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMATTIPGARQLVNHRHILVNGGIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + + + + ++P++++++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRVLIQNSLDSSSHEELPKHLTLHPFQYKGLVNQIIDS 172 >gi|320109000|ref|YP_004184590.1| 30S ribosomal protein S4 [Terriglobus saanensis SP1PR4] gi|319927521|gb|ADV84596.1| ribosomal protein S4 [Terriglobus saanensis SP1PR4] Length = 206 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 112/210 (53%), Gaps = 11/210 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 MS+R SK KI R +G L G K + R+Y PG HGQ RKSKP+ F LQLR KQK+ Sbjct: 1 MSER--SKFKIQRALGIELPGLGKPGALEKRNYPPGQHGQARKSKPTEFALQLREKQKLL 58 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 +YG E+ R + RS + + L+S LE RLD IV+R F ++ AARQ V+H Sbjct: 59 FHYGLREEQLRRFVRDARRRSTTNWAETLVSLLERRLDNIVFRLGFARSMAAARQLVSHG 118 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMV 176 HVLVNGR V+IGS + GD + + + + EAS+ A R +P Y+ N Sbjct: 119 HVLVNGRPVSIGSVVLRLGDAVGLTDYAA--GEMTEASRSAPRLSLPSYLQFPEPSVNHH 176 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P S P V E+Y++ Sbjct: 177 GVMMSLPGS---EHIPFEFNIRQVAEYYAK 203 >gi|51458087|gb|AAU03396.1| ribosomal protein small subunit 4 [Asplenium hispanicum] Length = 186 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD + Sbjct: 20 STSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDNV 78 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ +S ++ S + Sbjct: 79 IFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRSTSCNALKNKSLV 138 Query: 160 AERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ D R+ + + LVVE+YSR Sbjct: 139 GDKT-PDHLTISLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 184 >gi|118724419|gb|ABL10783.1| ribosomal protein small subunit 4 [Argyrochosma fendleri] Length = 197 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 8/199 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDN---MVATFVRIPSSLK 187 SYR K D+I ++ + +V E+ L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKGESLGLGRDEVPDHLTLSISKTSEPTGLVNHM---AN 176 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 RESVNLDINELLVVEYYSR 195 >gi|78102709|gb|ABB21568.1| small ribosomal protein 4 [Plagiochila pleurata] Length = 165 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGILPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQL 165 >gi|108861120|gb|ABG21432.1| ribosomal protein small subunit 4 [Marsilea villifolia] Length = 191 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 10/194 (5%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 +L G N R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 SLPGLTGKAPNPRESRV-AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 59 RKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYP 192 D+I V+ + + + R ++P+++S + + ++ K Sbjct: 119 QDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMD 175 Query: 193 VIMQPNLVVEFYSR 206 + + L+VE+YSR Sbjct: 176 LNINELLIVEYYSR 189 >gi|78102663|gb|ABB21545.1| small ribosomal protein 4 [Plagiochila fusca] Length = 176 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 5/180 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRSARRAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K K K + V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIIAIKNKEKSRSIVTKNINSFQKFKIPSHLTFDSTELRGSVNQMINRE 176 >gi|51458089|gb|AAU03397.1| ribosomal protein small subunit 4 [Asplenium bullatum] Length = 188 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE R D Sbjct: 21 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRXDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 80 VLFRLGMASTISAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRAKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +R P++++V D R+ + + LVVE+YSR Sbjct: 140 VGDRT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 186 >gi|78102701|gb|ABB21564.1| small ribosomal protein 4 [Plagiochila obtusa] Length = 176 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 5/165 (3%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A +++G T L+ LE R D Sbjct: 16 STPNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++ PTI ARQ VNHRH+ +N V+I SY C+ GD+I + K K A V + Sbjct: 75 TIFSLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNIN 134 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 ++ +P +++ + + + ++ + + + LVVE Sbjct: 135 SFQKLKIPSHLTFDSTQLRGSVNQMINR---EWIDLKINELLVVE 176 >gi|77862525|gb|ABB04535.1| small ribosomal protein 4 [Cyathodium tuberosum] Length = 171 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 94/164 (57%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ + A ++ G T L+ LE RLD I++R Sbjct: 10 KISQYRIRLEEKQKLRFHYG-LTERQSLKYVRIARKAEGSTGQVLLQLLEMRLDNIIFRL 68 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAER 162 PTI +ARQ VNHRH+L+N +++I SY CK D+I +K + + + V + + L E+ Sbjct: 69 GVAPTIPSARQLVNHRHILINNNTISIPSYNCKSRDIITIKNRPQSQSIVKKNLKFLQEQ 128 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ + ++ +I + + LVVE+YSR Sbjct: 129 KIPNHLNFDLIHLKGLVHQIIDR---EWISLKINELLVVEYYSR 169 >gi|289576418|dbj|BAI77783.1| ribosomal protein small subunit 4 [Hymenophyllum lyallii] gi|289576422|dbj|BAI77785.1| ribosomal protein small subunit 4 [Hymenophyllum rufescens] Length = 189 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +N R Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 LPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194 D+I V+ + + E + + R +P++++ + I + Sbjct: 119 DLITVRNRPSSYSGSKENIEFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|99639933|emb|CAJ45125.1| putative ribosomal protein S4 gene [Alsophila ramispina] Length = 199 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 20/208 (9%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHG----QRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+ K+ PG Q K S F ++L AKQ+++ YG Sbjct: 1 RLKVIRRLKNLPGLTGKTSN------PGETRIATDQSASRKISQFCVRLEAKQRLRFNYG 54 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LV Sbjct: 55 -LTERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILV 112 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVAT 178 N R V++ SYRCK D+I V+ + + + R +P+++S + Sbjct: 113 NDRIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLSFSLLEGNRPKGL 172 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 173 VNRI---ANRESIDLNINELLVVEYYSR 197 >gi|99639912|emb|CAJ45123.1| putative ribosomal protein S4 gene [Alsophila colensoi] gi|99639923|emb|CAJ45124.1| putative ribosomal protein S4 gene [Alsophila foersteri] Length = 199 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 8 KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180 R V++ SYRCK D+I V+ + + + R ++P++++ + Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197 >gi|18027962|gb|AAL55905.1| ribosomal protein S4 [Eriosorus myriophyllus] gi|18027964|gb|AAL55906.1| ribosomal protein S4 [Eriosorus myriophyllus] Length = 191 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQK++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRCK D+I ++++ +V + Sbjct: 83 IIFRLGMASTIPAARQLVNHRHILVNECVVDIPSYRCKPKDIITIRKRP-IFHNVAKNES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ V + + + LVVE+YSR Sbjct: 142 IGRAGLPDHLTISFSKAGDPVGLVNHM---ASRESVDLEINELLVVEYYSR 189 >gi|51458205|gb|AAU03449.1| ribosomal protein small subunit 4 [Asplenium polyodon] Length = 189 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 22 QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ PTI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + Sbjct: 81 VLFHLGMAPTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRKK-S 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++V D R+ + + LVVE+YSR Sbjct: 140 LVGGKTPDHLTVSLAEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|305672301|gb|ADM63574.1| ribosomal protein S4 [Berzelia lanuginosa] Length = 173 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + ++P+++ ++ +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIRNYLDSSPHEELPKHLILHPFQYKGLVNQIIDS 172 >gi|18027958|gb|AAL55903.1| ribosomal protein S4 [Pterozonium reniforme] gi|18027960|gb|AAL55904.1| ribosomal protein S4 [Pterozonium reniforme] Length = 191 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 2/189 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K + Q K S F ++L KQK++ YG ++E++ + A Sbjct: 3 LPGLTGKDKTSNSGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 ++RG T L+ LE RLD I++R TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 62 RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKP 121 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++ + + + + +P++++++ + + + Sbjct: 122 KDIITIRNRPIFHNAAKD-ESIGRDGIPDHLTLSFSKAGEQVGLVNHIASRESVDLDINE 180 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 181 LLVVEYYSR 189 >gi|78102689|gb|ABB21558.1| small ribosomal protein 4 [Plagiochila maderensis] Length = 173 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 5/177 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ FLE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SY C+ GD+I ++ K K + V + ++ +P +++ N + + ++ Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSVNQMI 173 >gi|51458092|gb|AAU03398.1| ribosomal protein small subunit 4 [Asplenium aureum] Length = 185 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 19 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 78 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALKNKSL 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V+ R+ + + LVVE+YSR Sbjct: 138 VGDKT-PDHLTVSLSEGNRPTGLVNRV---ANRESINLNINELLVVEYYSR 184 >gi|74273115|gb|ABA01257.1| ribosomal protein S4 [Passiflora coriacea] Length = 201 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 16/175 (9%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + S + +L+ KQ+++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 29 RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + ++ Sbjct: 88 GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSLDMI 147 Query: 158 ------QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ + +I + + LV+E+YSR Sbjct: 148 KKSLDDSSPRKKLPTHLILYRKEYKGLVNQIIDRK---WVGLKINELLVIEYYSR 199 >gi|78102655|gb|ABB21541.1| small ribosomal protein 4 [Plagiochila fasciculata] Length = 172 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 5/176 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + + ++ Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNMNSFQKLKIPSHLTFDSTQLQGSVNQM 172 >gi|99640050|emb|CAJ45147.1| putative ribosomal protein S4 gene [Sphaeropteris medullaris] Length = 198 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 16/205 (7%) Query: 9 HKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K+ RR+ K+ P TR Q K S F ++L AKQ+++ YG ++ Sbjct: 1 LKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E+ R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R Sbjct: 56 ERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDR 114 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVR 181 V++ SYRCK D+I V+ + + + R ++P++++ + R Sbjct: 115 IVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVNR 174 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + LVVE+YSR Sbjct: 175 I---ANRESIALNINELLVVEYYSR 196 >gi|17154622|emb|CAC83923.1| ribosomal protein S4 [Herbertia pulchella] Length = 181 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 9/189 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K RR+G + P + R L Q R K S ++L +QK++ +YG ++E+ Sbjct: 1 CKKIRRLGALQELTTRRPTSGR----DLKNQLRSGKRSQXRIRLEEQQKLRFHYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V Sbjct: 56 QLLKYVHIAGKAKGSTGQVLLQILEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIV 115 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLK 187 +I SYRCK D+I K K + A + L+ + ++P +++++ +I S Sbjct: 116 DIPSYRCKPRDIITTKDKQRSKALIQNYIDLSPQEELPNHLTMDPFQYKGLVNQIIDSK- 174 Query: 188 DVPYPVIMQ 196 + + Sbjct: 175 --WIGLKIN 181 >gi|219973328|gb|ACL68550.1| ribosomal protein small subunit 4 [Marsilea deflexa] Length = 188 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S F ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAVD----QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSVLEGNKPKGVVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|219973320|gb|ACL68546.1| ribosomal protein small subunit 4 [Marsilea ancyclopoda] gi|219973412|gb|ACL68592.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973414|gb|ACL68593.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973416|gb|ACL68594.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973418|gb|ACL68595.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973420|gb|ACL68596.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973422|gb|ACL68597.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973424|gb|ACL68598.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973426|gb|ACL68599.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973436|gb|ACL68604.1| ribosomal protein small subunit 4 [Marsilea vestita] Length = 188 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSNNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|107770425|gb|ABF83754.1| small ribosomal protein 4 [Amentotaxus argotaenia] gi|107770427|gb|ABF83755.1| small ribosomal protein 4 [Amentotaxus yunnanensis] Length = 195 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 11/197 (5%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P R G + KPS + + L+ KQ+++ YG ++E++ Sbjct: 2 RLKTLPGLSKKTP--NRIEQSGNKKHSKPPKPSKYPVCLKEKQRLRFNYG-LTERQLLQY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SY Sbjct: 59 VRIARRANGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKD 188 RCK D+I +K + + + + L++RD VP ++++ + +I S + Sbjct: 119 RCKPQDLISIKDQQRSRNIINKNIDLSQRDKIWVPNHLNLLKKKSQYIGLVKKIIDSKR- 177 Query: 189 VPYPVIMQPNLVVEFYS 205 + + LVVE+YS Sbjct: 178 --ISLKINELLVVEYYS 192 >gi|52788821|gb|AAU87383.1| ribosomal protein small subunit 4 [Todea barbara] Length = 188 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 9/191 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +N + + Q K S + ++L AKQ+++ YG +E++ + A + Sbjct: 1 PGLTNKTLNPKKARIAI-DQSASKKISQYCIRLEAKQRLRFNYGS-TERQLLRYVRIARK 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD IV PTI AARQ VNHRH+LVN V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNIVPELGMAPTIPAARQSVNHRHILVNDHIVDIPSYRCKPRD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIM 195 + + ++ + + + ++ + +P++++++ RI + + + Sbjct: 119 ITTARDRTSSYDRITKEIESSQGEKIPDHLTLSLSGGNRPKGLVNRIVNRD---SIGLNI 175 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 176 NELLVVEYYSR 186 >gi|51458140|gb|AAU03419.1| ribosomal protein small subunit 4 [Asplenium trichomanes subsp. quadrivalens] Length = 184 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 17 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 76 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 135 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ K + + LVVE+YSR Sbjct: 136 VGDKT-PDHLTVSLSEGDRPTGLVNRV---AKRESINLNINELLVVEYYSR 182 >gi|51458097|gb|AAU03400.1| ribosomal protein small subunit 4 [Asplenium erectum] Length = 181 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 14 QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + + L Sbjct: 73 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LGDKS 131 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P++++V D R+ + + LVVE+YSR Sbjct: 132 FVRDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 179 >gi|289576406|dbj|BAI77777.1| ribosomal protein small subunit 4 [Hymenophyllum dentatum] Length = 194 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ + K + Q K S F ++L AKQ+++ YG +E++ Sbjct: 1 RRLKDLPGLTIKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 57 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I S Sbjct: 58 YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPS 117 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188 YRCK D+I V+ + + E + R +P++++ + I Sbjct: 118 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSENNIPKGLVNGI---ANR 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 ESIDLNINELLVVEYYSR 192 >gi|17154609|emb|CAC83916.1| ribosomal protein S4 [Ennealophus euryandrus] Length = 176 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 9/184 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKY 55 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 56 VHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 115 Query: 134 RCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 RCK D+I K K + + ++P +++++ +I S Sbjct: 116 RCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK---WIG 172 Query: 193 VIMQ 196 + + Sbjct: 173 LKIN 176 >gi|52788794|gb|AAU87377.1| ribosomal protein small subunit 4 [Coniogramme fraxinea] gi|99640377|emb|CAJ45119.1| putative ribosomal protein S4 gene [Coniogramme fraxinea] Length = 199 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 2/199 (1%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K + Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKLMRRLKNLPGLAGKDGTSNLGDFRIAGDQSASKKISQFCVRLEAKQRLRFNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++RG T + LE RLD I+++ TI AARQ VNHRH+LVN R Sbjct: 60 RQLLKYVRIARKTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNHRV 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 V+I SYR K D++ ++ + + + L +P+++ ++ + Sbjct: 120 VDIPSYRRKPRDILTIRSRPTSRNAAK-SEYLGGNKIPDHLILSLPKTGEPVGLVNHMAN 178 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 RESVDLNINELLVVEYYSR 197 >gi|18028046|gb|AAL55947.1| ribosomal protein S4 [Jamesonia alstonii] gi|18028068|gb|AAL55958.1| ribosomal protein S4 [Jamesonia imbricata] Length = 190 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 23 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 82 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 188 >gi|170516217|gb|ACB15110.1| small ribosomal protein 4 [Libocedrus sp. QBW-2007] Length = 200 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI + K+P R P + KPS + ++L+ KQ+++ +YG + E Sbjct: 1 RLKIISCLKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 58 RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRI 182 V+I SYRCK D+I +K+K + + + ++D VP +++ +I Sbjct: 118 VDIPSYRCKPQDLISIKEKQGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGVVKKI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 178 IDNKR---IGLKINELLVVEYYSR 198 >gi|74273149|gb|ABA01274.1| ribosomal protein S4 [Passiflora xiikzodz] Length = 201 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 16/175 (9%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + S + +L+ KQ+++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 29 RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + ++ Sbjct: 88 GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKNEQKSKDMIKKSLDSLDMI 147 Query: 158 ------QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P ++ + +I + + LV+E+YSR Sbjct: 148 KKSLDDSSPRKKLPTHLILYRKEYKGLVNQIIDRK---WVGLKINELLVIEYYSR 199 >gi|118175399|gb|ABK76262.1| ribosomal protein S4 [Adiantum aleuticum] Length = 195 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ KS + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKSNASNLGEFRVAGDQSTSRKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + + Sbjct: 120 SYRRKPRDIITIRNRPTSCNAAK-GESLGRDEVPDHLTLSLSKTGEPTGLVNHMVNR--- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|311901200|gb|ADQ13150.1| small ribosomal protein 4 [Nephrolepis pectinata] Length = 177 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 10 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK GD+I V+ + ++ Sbjct: 69 VIFHLGMTSTIPAARQLVNHRHILVNNCIVDIPSYRCKPGDIITVRNRPTSYNALRAEFS 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P+++++ + I + + LVVE+YSR Sbjct: 129 VGDKT-PDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 175 >gi|18028048|gb|AAL55948.1| ribosomal protein S4 [Jamesonia alstonii] gi|18028076|gb|AAL55962.1| ribosomal protein S4 [Jamesonia laxa] Length = 191 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189 >gi|118175403|gb|ABK76264.1| ribosomal protein S4 [Adiantum pedatum] Length = 195 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ KS + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKSNASNLGEFRVAGDQSASRKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + + Sbjct: 120 SYRRKPRDIITIRNRPTSCNAAK-GESLGRDEVPDHLTLSLSKTGEPTGLVNHMVNR--- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|39939072|ref|NP_950838.1| 30S ribosomal protein S4 [Onion yellows phytoplasma OY-M] gi|39722181|dbj|BAD04671.1| ribosomal protein S4 and related protein [Onion yellows phytoplasma OY-M] Length = 149 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 92/155 (59%), Gaps = 6/155 (3%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 ++ KQK++ YG +SEK+FR F A + +G + LESRLD +VYR F T Sbjct: 1 MQEKQKLRFTYG-VSEKQFRKTFDNASKLKGIHGEMFLVLLESRLDNVVYRLGFAKTRAQ 59 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN 171 ARQ NH H+LV+G+ V+I SYR K G + +++KSK L V EA ++ +Y+S++ Sbjct: 60 ARQLANHGHILVDGKKVDIASYRLKPGQTVTLREKSKNLNIVQEAVN-SKFVRADYVSLD 118 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +V +VR P + +P + L+VE+Y+R Sbjct: 119 KE-LVGKYVRYPQRNEFLP---DINEQLIVEYYNR 149 >gi|320455032|dbj|BAJ65663.1| small ribosomal protein 4 [Metzgeria decipiens] Length = 185 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 8/192 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RTKIIRRLGALPGLTSKTFKSKSSY---IDRPAPNKKISQYRVRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++R VPTI AARQ VNH H+ +N Sbjct: 57 RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 V+I SY C+ GD+I +K + + + ++E ++ +P +++ + ++ + R+ + Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSIQKQGIPNHLAFDSTKIIGSVNRVINR- 175 Query: 187 KDVPYPVIMQPN 198 + + Sbjct: 176 --ECIDLKINEL 185 >gi|29422379|gb|AAO84585.1| small ribosomal protein 4 [Philonotis thwaitesii] Length = 153 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 5/155 (3%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK +YG I+E++ + + A + +G T L+ LE RLD +++R PTI A Sbjct: 1 EKKQKSXCHYG-ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGA 59 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171 RQ VNHRH+LVN R V+I SYRCK D I +K + K A + + ++ +P +++ N Sbjct: 60 RQLVNHRHILVNDRLVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYN 119 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVVE+YSR Sbjct: 120 SLENKGLVNQI---LDRESIGLKINELLVVEYYSR 151 >gi|32401812|gb|AAP80894.1| small ribosomal protein 4 [Saxifraga stolonifera] Length = 184 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 9/184 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K P G L Q R K S + ++L KQK++ +YG ++E++ + A Sbjct: 1 LPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I++R TI ARQ VNHRHVLVNGR V+I SYRCK Sbjct: 56 GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKS 115 Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 DVI K + K + + + +VP+Y++++ +I + + + Sbjct: 116 RDVITAKDEQKSRTLIQNSLDSSPHEEVPKYLTLHPLQYKGLVNQIIDNK---WVGLKIN 172 Query: 197 PNLV 200 LV Sbjct: 173 ELLV 176 >gi|157689582|gb|ABV65347.1| ribosomal protein S4 [Viviania marifolia] Length = 188 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 15/177 (8%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 R+ K S + ++L KQK++ +YG ++E++ + A +++G T L+ +E RLD + Sbjct: 14 RREKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGATGQVLLQLIEMRLDNTL 72 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-- 158 +R TI ARQ VNHRH+LVNG +V+I SYRCK D+I V+ + K A + Sbjct: 73 FRLGMAFTIPQARQLVNHRHILVNGHTVDIPSYRCKPRDIITVRDEEKSKALIQNCIDSR 132 Query: 159 ---------LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +R +P +++ I + ++ VVE+YSR Sbjct: 133 NRKEFPKGVLPKRKLPNHLTFELSQYKGFVEEIVDRD---GIGLKIKELRVVEYYSR 186 >gi|18027950|gb|AAL55899.1| ribosomal protein S4 [Taenitis interrupta] Length = 190 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 10/193 (5%) Query: 18 NLWGRPKSPVNTRSYGPGL----HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 NL G ++ PG Q K S F ++L KQK++ YG ++E++ Sbjct: 2 NLPGLTGKD---KTSNPGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD I++R TI AARQ VNHRH+LVN V+I SY Sbjct: 58 VRIARKTKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNKCIVDIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 RCK D+I ++ + + + + +P++++++ + + Sbjct: 118 RCKPKDIITIR--KRPIFHTVAKDEFIRDGIPDHLTLSFSKAGEQVGLVNHMASRESVDL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVEFYSR Sbjct: 176 EINELLVVEFYSR 188 >gi|117306730|emb|CAH73333.1| ribosomal protein S4 [Tetraphidopsis pusilla] Length = 179 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 9/186 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G + +S K + ++L KQK++ +YG I+E++ + + A ++ Sbjct: 1 GLTNKILQVKSSSINQ--STSNKKIXQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKT 57 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 58 KGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQDF 117 Query: 141 IEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 I V+ K K A + +P +++ + +I L + + LV Sbjct: 118 IIVENKQKSEA---ATDFSKKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINELLV 171 Query: 201 VEFYSR 206 VE+YSR Sbjct: 172 VEYYSR 177 >gi|311901202|gb|ADQ13151.1| small ribosomal protein 4 [Nephrolepis pendula] Length = 178 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK GD+I V+ + ++ Sbjct: 70 VIFHLGMTSTIPAARQLVNHRHILVNNCIVDIPSYRCKPGDIITVRNRPTSYNALRAEFS 129 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P+++++ + I + + LVVE+YSR Sbjct: 130 VGDKT-PDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|51458190|gb|AAU03442.1| ribosomal protein small subunit 4 [Asplenium theciferum] Length = 195 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 28 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 86 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ + S Sbjct: 87 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRKKSL 146 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++ D RI + + LVVE+YSR Sbjct: 147 VGDKT-PDHLTFALSEGDRPTGLVNRI---ANRESINLNINELLVVEYYSR 193 >gi|52788810|gb|AAU87379.1| ribosomal protein small subunit 4 [Monachosorum henryi] Length = 197 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 10/202 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+ + Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKLIRRLKNLPGLTGKTSNLGETRV--ATDQSASRKISQFCVRLEAKQRLRLNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++RG T L+ LE RLD +++ TI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTRGSTGQVLLQLLEMRLDNVIFHLGMASTIPAARQLVNHRHILVNYRV 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPS 184 V+I SYR K D+I + + ++ + S + ++ +P++++++ RI Sbjct: 118 VDIPSYRRKPKDIITARNRPTSYNALRDQSLVGDK-IPDHLTLSLSEGNRPTGLANRI-- 174 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 -ANRESVNLNINELLVVEYYSR 195 >gi|219973330|gb|ACL68551.1| ribosomal protein small subunit 4 [Marsilea fournieri] gi|219973338|gb|ACL68555.1| ribosomal protein small subunit 4 [Marsilea macropoda] gi|219973340|gb|ACL68556.1| ribosomal protein small subunit 4 [Marsilea macropoda] gi|219973342|gb|ACL68557.1| ribosomal protein small subunit 4 [Marsilea macropoda] gi|219973346|gb|ACL68559.1| ribosomal protein small subunit 4 [Marsilea macropoda] gi|219973348|gb|ACL68560.1| ribosomal protein small subunit 4 [Marsilea macropoda] gi|219973350|gb|ACL68561.1| ribosomal protein small subunit 4 [Marsilea macropoda] gi|219973374|gb|ACL68573.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|219973382|gb|ACL68577.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|219973386|gb|ACL68579.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|219973388|gb|ACL68580.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|219973438|gb|ACL68605.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973440|gb|ACL68606.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973442|gb|ACL68607.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973444|gb|ACL68608.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973446|gb|ACL68609.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973448|gb|ACL68610.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973450|gb|ACL68611.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973454|gb|ACL68613.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973460|gb|ACL68616.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973466|gb|ACL68619.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973476|gb|ACL68624.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|219973480|gb|ACL68626.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|219973484|gb|ACL68628.1| ribosomal protein small subunit 4 [Marsilea vestita] Length = 188 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|16565391|gb|AAL26210.1|AF313610_1 small ribosomal protein 4 [Gnetum ula] Length = 193 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 10/198 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K P + R K S L+ KQK++ ++G ++E++ R Sbjct: 1 IRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTERQLR 56 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN VNI Sbjct: 57 QYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVVNIP 116 Query: 132 SYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 SY+CK DVI +K K + ++ E +P +++++ +I Sbjct: 117 SYQCKPQDVITIKGKKIDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKIIDRKD- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 176 --IQLNIKEMLVIEYYSR 191 >gi|86438890|emb|CAJ55421.1| small ribosomal protein 4 [Plagiochila equitans] Length = 172 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 90/174 (51%), Gaps = 5/174 (2%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+ + SY + K S + ++L KQK++ +YG ++E++ Sbjct: 1 RLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N V+I SY Sbjct: 57 MRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186 C+ GD+I ++ K K +++ + + +P +++ + + + ++ + Sbjct: 117 NCEPGDIITIRNKQKSQSAITKNINSFXKLKIPSHLTFDSTQLRGSVNQMINRE 170 >gi|219973452|gb|ACL68612.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973458|gb|ACL68615.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973464|gb|ACL68618.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973468|gb|ACL68620.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973470|gb|ACL68621.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973472|gb|ACL68622.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973474|gb|ACL68623.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973478|gb|ACL68625.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973488|gb|ACL68630.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973490|gb|ACL68631.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973492|gb|ACL68632.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973494|gb|ACL68633.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973496|gb|ACL68634.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973498|gb|ACL68635.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973500|gb|ACL68636.1| ribosomal protein small subunit 4 [Marsilea vestita] Length = 188 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I ++ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|18028040|gb|AAL55944.1| ribosomal protein S4 [Jamesonia pulchra] Length = 188 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 21 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 80 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 139 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 186 >gi|118175401|gb|ABK76263.1| ribosomal protein S4 [Adiantum pedatum] Length = 195 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ KS + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKSNASNLGEFRVAGDQSALRKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + + Sbjct: 120 SYRRKPRDIITIRNRPTSCNAAK-GESLGRDEVPDHLTLSLSKTGEPTGLVNHMVNR--- 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|18027956|gb|AAL55902.1| ribosomal protein S4 [Pterozonium cyclosorum] Length = 191 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 2/168 (1%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQK++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + +V + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKPKDIITIRNRP-IFHNVSKDES 141 Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + LVVE+YSR Sbjct: 142 IGRDGIPDHLTLSFSKAGERVGLVNHMASRESVDLDINELLVVEYYSR 189 >gi|27452500|gb|AAO15278.1| ribosomal protein S4 [Afropteris barklyae] Length = 191 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRCK D+I ++ + + A Sbjct: 83 IIFRLGMSSTIPAARQLVNHRHILVNQRIVDIPSYRCKPRDIITIRNRPTSHNAAK-AES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++++ + + + LVVE+YSR Sbjct: 142 PGGGGIPDHLTLSLSKTGEPAGLVNHM---ANRESVDLDINELLVVEYYSR 189 >gi|51458101|gb|AAU03402.1| ribosomal protein small subunit 4 [Asplenium fragile] Length = 181 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 14 QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + S Sbjct: 73 VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 132 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 133 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 179 >gi|305672313|gb|ADM63580.1| ribosomal protein S4 [Eremosyne pectinata] Length = 171 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 6/176 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTKKRP----RVGSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD ++R TI ARQ +NHRH+LVN R V+ Sbjct: 56 LLKYVRIAGKAKGSTGRVLLQLLEMRLDNTLFRLGMATTIPGARQLINHRHILVNDRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPS 184 I SYRCK D I + + K A + + ++P +++++ +I Sbjct: 116 IPSYRCKPRDTITGRGEQKSRALIQNSLDSFPNEELPNHLTLHPLEYKGLVNQIID 171 >gi|305672293|gb|ADM63570.1| ribosomal protein S4 [Grisollea myrianthea] Length = 173 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTTKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN R V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNSRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K A + + + + + P++++++ +I + Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSLESSPHEESPKHLTLHPFQSKGFVNQIIDN 172 >gi|289576402|dbj|BAI77775.1| ribosomal protein small subunit 4 [Hymenophyllum peltatum] gi|289576410|dbj|BAI77779.1| ribosomal protein small subunit 4 [Hymenophyllum peltatum] Length = 189 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +N R Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 LPGLTNKKLNLREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194 D+I V+ + + E + R +P++++ + I + Sbjct: 119 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|165979148|gb|ABY77017.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp. fontanum] Length = 188 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNYIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 140 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 186 >gi|18027954|gb|AAL55901.1| ribosomal protein S4 [Austrogramme decipiens] Length = 191 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 2/189 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K + Q K S F ++L KQK++ YG ++E++ + A Sbjct: 3 LPGLTGKDKTSNSGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 ++RG T L+ LE RLD I++R TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 62 RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKP 121 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++++ + + + +P++++ + + + + + Sbjct: 122 KDIITIRKRPIFHTAAKD-EFIGRAGIPDHLTFSFSKAGEQVGLVNNMANRESVDLEINE 180 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 181 LLVVEYYSR 189 >gi|17154473|emb|CAC83795.1| ribosomal protein S4 [Chasmanthe aethiopica] Length = 176 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 HIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK D+I K K + A + AS + ++P +++++ +I S Sbjct: 116 CKPRDIITTKNKQRSKALIQNLIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK---WIG 172 Query: 193 VIMQ 196 + + Sbjct: 173 LKIN 176 >gi|66866236|gb|AAY57787.1| small ribosomal protein 4 [Pyrrhobryum paramattense] Length = 206 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 10/177 (5%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 32 INQSTSNRKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 90 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K + Sbjct: 91 LDNIIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDREKYQTIIXX 150 Query: 156 ASQLAERD------VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 D +P +++ N +I L + + LVVE+YSR Sbjct: 151 XXXXKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---LDRESISLKINELLVVEYYSR 204 >gi|219973482|gb|ACL68627.1| ribosomal protein small subunit 4 [Marsilea mollis] Length = 188 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLKYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|16565387|gb|AAL26208.1|AF313608_1 small ribosomal protein 4 [Marsilea mutica] Length = 188 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S F ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|310707171|gb|ADP08971.1| Rps4 [Saccoloma inaequale] Length = 189 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A +++G T + LE RLD Sbjct: 22 QSGSKKISQFCVRLEAKQRLRFSYG-LTERQPLNYVRIARKTKGSTGQVSLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN R V+I SYRC+ D+I V+ + ++VL + Sbjct: 81 VIFHPGVASTIPAARQLVNHRHILVNNRIVDIPSYRCEPKDIITVRNRPTS-SNVLRNAS 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++++ RI + + LVVE+YSR Sbjct: 140 FGRDKIPDHLTLSLTEGSRPTGLVNRI---ANRESVDLNINELLVVEYYSR 187 >gi|301353380|ref|YP_003795582.1| ribosomal protein S4 [Pteridium aquilinum subsp. aquilinum] gi|301016298|gb|ADK47585.1| ribosomal protein S4 [Pteridium aquilinum subsp. aquilinum] Length = 195 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ + + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRFNYG-LTERQPL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T L LE RLD +++ TI AARQ VNHRH+LVN V+I Sbjct: 60 KYVRIARKTRGSTGQVLPQLLEMRLDNVIFHLGMASTIPAARQLVNHRHILVNNHVVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKD 188 SYRCK D+I V+ + ++ S L E+ +P+++++ RI Sbjct: 120 SYRCKPKDIITVRNRPTSYNALKGESLLGEK-IPDHLTLSLSEGSKPTGLVNRI---ASR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLNINELLVVEYYSR 193 >gi|18028082|gb|AAL55965.1| ribosomal protein S4 [Jamesonia brasiliensis] Length = 187 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 20 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 79 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 138 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 185 >gi|18028034|gb|AAL55941.1| ribosomal protein S4 [Jamesonia canescens] gi|18028036|gb|AAL55942.1| ribosomal protein S4 [Jamesonia canescens] gi|18028038|gb|AAL55943.1| ribosomal protein S4 [Jamesonia canescens] gi|18028044|gb|AAL55946.1| ribosomal protein S4 [Jamesonia alstonii] gi|18028050|gb|AAL55949.1| ribosomal protein S4 [Jamesonia rotundifolia] gi|18028052|gb|AAL55950.1| ribosomal protein S4 [Jamesonia rotundifolia] gi|18028054|gb|AAL55951.1| ribosomal protein S4 [Jamesonia rotundifolia] gi|18028060|gb|AAL55954.1| ribosomal protein S4 [Jamesonia imbricata] gi|18028062|gb|AAL55955.1| ribosomal protein S4 [Jamesonia imbricata] gi|18028066|gb|AAL55957.1| ribosomal protein S4 [Jamesonia imbricata] gi|18028074|gb|AAL55961.1| ribosomal protein S4 [Jamesonia imbricata] gi|18028080|gb|AAL55964.1| ribosomal protein S4 [Jamesonia imbricata] Length = 191 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189 >gi|157689512|gb|ABV65312.1| ribosomal protein S4 [Leonia glycycarpa] Length = 144 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 4/143 (2%) Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 3 ITERQLLTYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVN 62 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIP 183 GR V+I SYRCK D+I K K K A + L + ++P+++++N +I Sbjct: 63 GRIVDIPSYRCKPRDIITAKDKKKSRAMIPNYLDSLPQEELPKHLTLNPFQCKGLVNQII 122 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 S + + LVVE+YSR Sbjct: 123 DSK---WVDLKINELLVVEYYSR 142 >gi|51458155|gb|AAU03426.1| ribosomal protein small subunit 4 [Asplenium varians] Length = 190 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + + L Sbjct: 82 VLFHLGIASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LGNKS 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++V D R+ + + LVVE+YSR Sbjct: 141 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 188 >gi|219973322|gb|ACL68547.1| ribosomal protein small subunit 4 [Marsilea hirsuta] gi|219973332|gb|ACL68552.1| ribosomal protein small subunit 4 [Marsilea hirsuta] gi|219973334|gb|ACL68553.1| ribosomal protein small subunit 4 [Marsilea hirsuta] gi|219973408|gb|ACL68590.1| ribosomal protein small subunit 4 [Marsilea hirsuta] Length = 188 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|78102667|gb|ABB21547.1| small ribosomal protein 4 [Plagiochila gregaria] Length = 165 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 V+I SY C+ GD+I +K K K +++ + ++ +P +++ + + Sbjct: 117 VDISSYNCEPGDIITIKNKQKSQSAITKNINSFQKLKIPSHLTFDSTQL 165 >gi|51458080|gb|AAU03393.1| ribosomal protein small subunit 4 [Asplenium cuspidatum] Length = 189 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +SE++ + A ++RG T + LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQRLRFNYG-LSERQLLRYVRIARKTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN V+I SYRC D+I V+ + + L+ Sbjct: 81 VLFQLGMASTIPAARQLVNHRHILVNNWIVDIPSYRCSPKDIITVRNRPTSCNA-LKNRS 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P++++V D R+ + + LVVE+YSR Sbjct: 140 FVGYKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|219973462|gb|ACL68617.1| ribosomal protein small subunit 4 [Marsilea deflexa] Length = 188 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 18 QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--A 156 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D+I V+ + + Sbjct: 77 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 136 Query: 157 SQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+++S + + ++ K + + L+VE+YSR Sbjct: 137 ESSRSNEIPDHLSLSVLEGNKPKGVVNQV---AKRESMDLNINELLIVEYYSR 186 >gi|52788785|gb|AAU87373.1| ribosomal protein small subunit 4 [Asplenium scolopendrium] Length = 191 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 24 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 83 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 142 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V+ R+ + + LVVE+YSR Sbjct: 143 VGDKT-PDHLTVSLSEGNRPTGLVNRV---ANRESINLNINELLVVEYYSR 189 >gi|219973428|gb|ACL68600.1| ribosomal protein small subunit 4 [Marsilea oligospora] gi|219973486|gb|ACL68629.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973502|gb|ACL68637.1| ribosomal protein small subunit 4 [Marsilea vestita] gi|219973504|gb|ACL68638.1| ribosomal protein small subunit 4 [Marsilea vestita] Length = 187 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 56 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I ++ + + + R ++P+++S + + ++ K + Sbjct: 116 DIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 172 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 173 NINELLIVEYYSR 185 >gi|99639971|emb|CAJ45131.1| putative ribosomal protein S4 gene [Cyathea grandifolia] gi|99639990|emb|CAJ45135.1| putative ribosomal protein S4 gene [Cyathea divergens] Length = 196 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%) Query: 11 IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 + RR+ K+ P TR+ Q K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V Sbjct: 56 LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIV 114 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIP 183 ++ SYRCK D+I V+ + + + R ++P++++ + RI Sbjct: 115 DVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVDRI- 173 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 --ANRESIDLNINELLVVEYYSR 194 >gi|219973326|gb|ACL68549.1| ribosomal protein small subunit 4 [Marsilea coromandelina] gi|219973456|gb|ACL68614.1| ribosomal protein small subunit 4 [Marsilea vestita] Length = 187 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 56 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P+++S + + ++ K + Sbjct: 116 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 172 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 173 NINELLIVEYYSR 185 >gi|305672271|gb|ADM63559.1| ribosomal protein S4 [Gomphandra javanica] Length = 173 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN R V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNSRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K A + + + + + P++++++ +I + Sbjct: 116 IPSYRCKPQDIITARDEQKSRALIQNSLESSPHEESPKHLTLHPFQSKGFVNQIIDN 172 >gi|17154712|emb|CAC83910.1| ribosomal protein S4 [Tritonia disticha] Length = 175 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 10/183 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P++ G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTSKRPIS----GSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K K + A + + + ++P +++++ +I S + Sbjct: 116 KPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQ 196 + Sbjct: 173 KIN 175 >gi|99640360|emb|CAJ45116.1| putative ribosomal protein S4 gene [Azolla pinnata] gi|157272409|gb|ABV27019.1| ribosomal protein small subunit 4-like protein [Azolla pinnata] gi|157272423|gb|ABV27026.1| ribosomal protein small subunit 4-like protein [Azolla pinnata] Length = 203 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 22/211 (10%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHG------QRRKSKPSYFGLQLRAKQKMKKY 61 + K+ RR+ +L G N PG K S F ++L AKQ+++ Sbjct: 1 RFKVIRRLK-SLPGLAGEAFN-----PGETWIATDQSTSTPKKISQFCVRLEAKQRLRYN 54 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E++ + A +++G T + LE RLD I+Y PTI AARQ VNHRH+ Sbjct: 55 YG-LTERQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIYHLGMSPTIPAARQPVNHRHI 113 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYIS---VNHDNM 175 LVN R V++ SYRCK D+I V+ + L V ++P +++ + + Sbjct: 114 LVNDRIVDVPSYRCKPKDIITVRNRPTSLNGVKRTGNFESSRGNELPNHLTLSLLEDNRP 173 Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + VVE+YSR Sbjct: 174 KGLVNQTATR---ESIDLNINELSVVEYYSR 201 >gi|78102625|gb|ABB21526.1| small ribosomal protein 4 [Plagiochila abietina] Length = 175 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 5/179 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 V+I SY C+ GD+I + K K A V + ++ +P +++ + + + ++ + Sbjct: 117 VDIPSYNCEPGDIIAIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRRSVNQMINR 175 >gi|51458123|gb|AAU03411.1| ribosomal protein small subunit 4 [Asplenium hobdyi] Length = 191 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 24 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 83 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSI 142 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 143 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 189 >gi|227439283|gb|ACP31318.1| ribosomal protein small subunit 4 [Pteridium arachnoideum] Length = 190 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P+++++ RI + + LVVE+YSR Sbjct: 142 LGEK-IPDHLTLSLSEGSKPTGLVNRI---ASRESVNLNINELLVVEYYSR 188 >gi|117306748|emb|CAH73342.1| ribosomal protein S4 [Acrocladium auriculatum] Length = 177 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A + Sbjct: 1 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 AKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K K K A + + + ++ +P +++ + +I L + + Sbjct: 117 FITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173 Query: 199 LVVE 202 LVVE Sbjct: 174 LVVE 177 >gi|18028032|gb|AAL55940.1| ribosomal protein S4 [Jamesonia canescens] gi|18028056|gb|AAL55952.1| ribosomal protein S4 [Jamesonia scammanae] Length = 190 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 23 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 82 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 188 >gi|51458161|gb|AAU03429.1| ribosomal protein small subunit 4 [Asplenium incisum] Length = 192 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A R+RG T + LE RLD Sbjct: 25 QSDLRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 84 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSI 143 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 144 VGDKT-PDHLTVSLSEGDRPTGFVNRV---ANRESINLNINELLVVEYYSR 190 >gi|42417085|gb|AAS16370.1| ribosomal protein small subunit 4 [Hecistopteris pumila] Length = 187 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 8/170 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F L+L AKQ+++ YG ++E++ + A +++G T + LE RLDT Sbjct: 23 QLASKKISQFCLRLEAKQRLRINYG-LTERQLIKYVRIARKTKGSTGQVSLQLLEMRLDT 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI ARQ V+HRH+LVN R V+ S+RCK GD I VK +V+ + Sbjct: 82 IIFQLGLASTIPTARQLVSHRHILVNRRIVDKPSFRCKPGDTITVKNL-TTCYNVVNSES 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 L VP+++++ N D + + + + LVVE+YS Sbjct: 141 LQNNKVPDHLTLFLSNTDQPTGLVKHMVNR---ESVSLDINELLVVEYYS 187 >gi|78102649|gb|ABB21538.1| small ribosomal protein 4 [Pedinophyllopsis abdita] Length = 165 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 5/169 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L LE RLD ++R TI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLXQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 V+I SY C+ GDVI ++ K K + + + ++ +P +++ + + Sbjct: 117 VDIPSYNCEPGDVIXIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQL 165 >gi|227439285|gb|ACP31319.1| ribosomal protein small subunit 4 [Pteridium arachnoideum] gi|227439287|gb|ACP31320.1| ribosomal protein small subunit 4 [Pteridium arachnoideum] gi|227439293|gb|ACP31323.1| ribosomal protein small subunit 4 [Pteridium caudatum] gi|227439297|gb|ACP31325.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439299|gb|ACP31326.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439301|gb|ACP31327.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439303|gb|ACP31328.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439305|gb|ACP31329.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439307|gb|ACP31330.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439311|gb|ACP31332.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439313|gb|ACP31333.1| ribosomal protein small subunit 4 [Pteridium esculentum] gi|227439323|gb|ACP31338.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439325|gb|ACP31339.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439327|gb|ACP31340.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439329|gb|ACP31341.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439331|gb|ACP31342.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439333|gb|ACP31343.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439335|gb|ACP31344.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439337|gb|ACP31345.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439339|gb|ACP31346.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439341|gb|ACP31347.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439343|gb|ACP31348.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439345|gb|ACP31349.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439347|gb|ACP31350.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439349|gb|ACP31351.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439351|gb|ACP31352.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439353|gb|ACP31353.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|227439409|gb|ACP31381.1| ribosomal protein small subunit 4 [Pteridium semihastatum] gi|227439411|gb|ACP31382.1| ribosomal protein small subunit 4 [Pteridium semihastatum] gi|227439413|gb|ACP31383.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] Length = 190 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P+++++ RI + + LVVE+YSR Sbjct: 142 LGEK-IPDHLTLSLSEGSKPTGLVNRI---ASRESVNLNINELLVVEYYSR 188 >gi|17154601|emb|CAC83823.1| ribosomal protein S4 [Gelasine elongata] Length = 175 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 9/183 (4%) Query: 15 IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 +G L K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 LGALLGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYR Sbjct: 56 HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115 Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 CK D+I K K + + ++P +++++ +I S + Sbjct: 116 CKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQ 196 + Sbjct: 173 KIN 175 >gi|51860513|gb|AAU11393.1| ribosomal protein small subunit 4 [Ephedra funerea] Length = 196 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 14/202 (6%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKK 69 I RR+ K P + +H R K S + + L+ KQK+ +YG ++E++ Sbjct: 1 IIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIXFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V+ Sbjct: 56 LRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPS 184 I SYRCK D+I +K K + + + VP Y++ N +I Sbjct: 116 IPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIID 175 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + ++ LV+E+YSR Sbjct: 176 TKD---LQLKIKEMLVIEYYSR 194 >gi|18028042|gb|AAL55945.1| ribosomal protein S4 [Jamesonia pulchra] Length = 175 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 8 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 66 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 67 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 125 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 126 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 173 >gi|165968061|gb|ABY75856.1| ribosomal protein small subunit 4 [Asplenium antiquum] Length = 188 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSNSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D++ V+ + ++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLVTVRNRPTSFNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++ RI + + LVVE+YSR Sbjct: 140 VGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|289576430|dbj|BAI77789.1| ribosomal protein small subunit 4 [Hymenophyllum atrovirens] Length = 189 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +N R Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 LPGLTNKRLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194 D+I V+ + + E + + R +P++++ + I + Sbjct: 119 DLITVRNRPSSYSGSKENIEFSRRRKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|51860465|gb|AAU11369.1| ribosomal protein small subunit 4 [Gnetum cuspidatum] Length = 198 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K P + R K S L+ KQK++ ++G ++E++ R Sbjct: 6 IRRLKTLPGLISKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTERQLR 61 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN VNI Sbjct: 62 QYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVVNIP 121 Query: 132 SYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 SY+C+ DVI +K K + ++ E+ +P +++++ +I Sbjct: 122 SYQCQPQDVITIKGKKTDQLKTIITRNRNKAREKKIPYHLTLDLSQNKGIVNKIIDRKD- 180 Query: 189 VPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 181 --IQLNIKEILVIEYYSR 196 >gi|305672183|gb|ADM63515.1| ribosomal protein S4 [Irvingbaileya australis] Length = 173 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 A +++G T L+ LE RLD I++R PTI ARQ VNHRHVLVN R V+ Sbjct: 56 LLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNSRIVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + K A + + + + + P++++++ +I + Sbjct: 116 IPSYRCKPRDIIMARDEQKSRALIQNSLESSPHEESPKHLTLHPFQSKGFVNQIIDN 172 >gi|51458178|gb|AAU03437.1| ribosomal protein small subunit 4 [Asplenium tenerum] Length = 189 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 22 QSTSRKXSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 81 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLIAVRNRPTSFNALRNKSL 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P++++ RI + + LVVE+YSR Sbjct: 141 EGDKT-PDHLTFALSESGRPTGLVNRI---ANRESINLNINELLVVEYYSR 187 >gi|254995547|emb|CAO82731.1| ribosomal protein S4 [Lycopodium nikoense] Length = 142 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 4/143 (2%) Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 ++E++ + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN Sbjct: 1 LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVN 60 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 R++N+ SYRCK D+I + +S+ A + + ++ ++ +P +++++ +I Sbjct: 61 NRAINVPSYRCKPKDIITARDRSESQAIIAKNNEFSQTYKIPNHLTLHSLQNKGLVNKII 120 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 121 DR---ESIDSNINELLVVEYYSR 140 >gi|219973354|gb|ACL68563.1| ribosomal protein small subunit 4 [Marsilea minuta] gi|219973356|gb|ACL68564.1| ribosomal protein small subunit 4 [Marsilea minuta] gi|219973358|gb|ACL68565.1| ribosomal protein small subunit 4 [Marsilea minuta] gi|219973360|gb|ACL68566.1| ribosomal protein small subunit 4 [Marsilea minuta] gi|219973362|gb|ACL68567.1| ribosomal protein small subunit 4 [Marsilea minuta] gi|219973364|gb|ACL68568.1| ribosomal protein small subunit 4 [Marsilea minuta] gi|219973366|gb|ACL68569.1| ribosomal protein small subunit 4 [Marsilea minuta] gi|219973368|gb|ACL68570.1| ribosomal protein small subunit 4 [Marsilea minuta] Length = 188 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 2 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 57 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D I V+ + + + R ++P+++S + + ++ K + Sbjct: 117 DNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 173 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 174 NINELLIVEYYSR 186 >gi|45271076|gb|AAS56926.1| ribosomal protein small subunit 4 [Coniogramme fraxinea] Length = 198 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 2/198 (1%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+ K + Q K S F ++L AKQ+++ YG ++E+ Sbjct: 1 LKLMRRLKNLPGLAGKDGTSNLGDFRIAGDQSASKKISQFCVRLEAKQRLRFNYG-LTER 59 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A ++RG T + LE RLD I+++ TI AARQ VNHRH+LVN R V Sbjct: 60 QLLKYVRIARKTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNHRVV 119 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 +I SYR K D++ ++ + + + L +P+++ ++ + Sbjct: 120 DIPSYRRKPRDILTIRSRPTSRNAAK-SEYLGGNKIPDHLILSLPKTGEPVGLVNHMANR 178 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 179 ESVDLNINELLVVEYYSR 196 >gi|32401830|gb|AAP80903.1| small ribosomal protein 4 [Welwitschia mirabilis] Length = 190 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K P + R K S + L+ KQK++ +YG ++E++ R Sbjct: 1 IRRLKTLPGLTSKRPKYKKRVR--RRFSRPWWKKSQHLICLQEKQKIRFHYG-LTERQLR 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 A R++G T L+ LE RLD I+++ TI AARQ VNHRHVLVNGR V+I Sbjct: 58 QYINIAKRAQGSTGQVLLQLLEMRLDNIIFQLGIARTIPAARQIVNHRHVLVNGRVVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQ--LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189 SYRCK DV+ +K K+ + + + R VP +++++ +I Sbjct: 118 SYRCKPQDVLTIKTKNPEELRTIINKNRSKFRRKVPYHLTLDLAQNKGIVNKIIDRKD-- 175 Query: 190 PYPVIMQPNLVVEFY 204 + +Q LV+E+Y Sbjct: 176 -IQLKIQEMLVIEYY 189 >gi|322434052|ref|YP_004216264.1| RNA-binding S4 domain protein [Acidobacterium sp. MP5ACTX9] gi|321161779|gb|ADW67484.1| RNA-binding S4 domain protein [Acidobacterium sp. MP5ACTX9] Length = 207 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 16/213 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKM 58 MS R K K+ R +G L G K + R++ PG HGQ + K + + +QLR KQK+ Sbjct: 1 MSNRT--KFKMQRALGLELPGLGKPGALEKRNFPPGQHGQTTTRRKLTQYAVQLREKQKL 58 Query: 59 KKYYGDISEKKFRSIFKEAD-RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +YG + E++ R + A + + +LI+ LE RLD +V+R F +I AARQ V+ Sbjct: 59 LFHYG-LREEQLRRFVRTARGMNSSNWIESLIALLELRLDNVVFRLGFARSIAAARQLVS 117 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H HVLVNG+ + IGS + G + + + A A +P Y+ + Sbjct: 118 HGHVLVNGKIMTIGSATLRSGTFVRLTDYAAG-AMTEAARNAPRLPLPSYLQF---ALEG 173 Query: 178 T----FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VR+ + + VP+ P V E+Y++ Sbjct: 174 VNDHGVVRMIPTPEHVPF--EFNPRQVAEYYAK 204 >gi|307828442|gb|ADN95017.1| small ribosomal protein 4 [Fossombronia pusilla] Length = 189 Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 8/194 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G + Y L ++ S+ + ++L KQK++ YG ++ + Sbjct: 1 RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRXXYG-LTXXQXLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ E LB I+ R PTI RQ V H + V+ +VNI SY Sbjct: 57 VRVARKAKGSTGQILLQLXEMXLBXIIXRLGXAPTIXXXRQLVXHXXIXVDDDTVNIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 CK GDVI V+ + K + + ++ L ++ P +++++ + + + Sbjct: 117 SCKPGDVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WIN 173 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 LKINELLVVEYYSR 187 >gi|219973380|gb|ACL68576.1| ribosomal protein small subunit 4 [Marsilea mollis] Length = 188 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 11/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S Q K S + ++L AKQ+++ YG ++E++ + A + Sbjct: 1 GLTGKAPNRRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARK 57 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D Sbjct: 58 TKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQD 117 Query: 140 VIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVI 194 +I V+ + + ++P+++S + + ++ K + Sbjct: 118 IITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLN 174 Query: 195 MQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 175 INELLIVEYYSR 186 >gi|99639954|emb|CAJ45127.1| putative ribosomal protein S4 gene [Cibotium chamissoi] Length = 196 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%) Query: 11 IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 + RR+ + K+ P TR Q K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKDLPGLTGKASNPGETRVAAD----QSTSRKISQFCVRLEAKQRLRFNYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 R + A +++G T + LE RLD I++ + TI AARQ VNHRH++VN R V Sbjct: 56 LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRIV 114 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIP 183 ++ SYRCK D+I V+ + + + R +P++++ + + RI Sbjct: 115 DVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLTLSLLEGNRPKGLVNRI- 173 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 --ANRESIDLNINELLVVEYYSR 194 >gi|17154603|emb|CAC83911.1| ribosomal protein S4 [Geissorhiza heterostyla] Length = 174 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 9/182 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTSKGS----KSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K K + A + + + ++P +++++ +I S + Sbjct: 116 KPRDIITTKNKQRSKALIQNFIDSSPQGELPNHLTIDPFQYKGLVNQIIDSK---WIGLK 172 Query: 195 MQ 196 + Sbjct: 173 IN 174 >gi|47606890|gb|AAT36365.1| ribosomal protein subunit 4 [Cryptopodium bartramioides] Length = 174 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 5/172 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ + G I+E++ + + A +++G T L+ LE R Sbjct: 5 INQSTSNXKISQYRIRLEEKQKLRXHXG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 63 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN R V+ SYRCK D I +K + K + + Sbjct: 64 LDNIIFRLGMTPTIPGARQLVNHRHILVNDRIVDXPSYRCKPQDFITIKDREKYQTIISK 123 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +P +++ N +I L + + LVVE+YSR Sbjct: 124 NIDFXQKYKIPNHLTYNXLEKKGVVNQI---LDRESXXLKINELLVVEYYSR 172 >gi|259503648|ref|ZP_05746550.1| 30S ribosomal protein S4 [Lactobacillus antri DSM 16041] gi|259168367|gb|EEW52862.1| 30S ribosomal protein S4 [Lactobacillus antri DSM 16041] Length = 142 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 6/147 (4%) Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG ++E++F ++F A + + T N ++ LE RLD +VYR T ARQ VNH Sbjct: 1 MYG-MTERQFANLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 59 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179 H+ V+G+ V+I SY VI V++KSK L + A A P Y+ + D + Sbjct: 60 HITVDGKRVDIPSYEVDVNQVIAVREKSKNLDIIKNAVD-AVVSRPSYVDFDADKLEGKL 118 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RIP+ + L+VEFY++ Sbjct: 119 NRIPAR---EDMDADIDEALIVEFYNK 142 >gi|18028070|gb|AAL55959.1| ribosomal protein S4 [Jamesonia imbricata] gi|18028072|gb|AAL55960.1| ribosomal protein S4 [Jamesonia imbricata] gi|18028078|gb|AAL55963.1| ribosomal protein S4 [Jamesonia imbricata] Length = 191 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + LVVEFYSR Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189 >gi|219973410|gb|ACL68591.1| ribosomal protein small subunit 4 [Marsilea mutica] Length = 180 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 10 QSTSKKISQFCVRLEAKQRLRFNYG-VTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D+I V+ + + Sbjct: 69 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 128 Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P+++S + + ++ K + + L+VE+YSR Sbjct: 129 ESSRSNEIPDHLSLSILEGNKPKGVVNQV---AKRESMDLNINELLIVEYYSR 178 >gi|51458142|gb|AAU03420.1| ribosomal protein small subunit 4 [Asplenium anceps] Length = 181 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 14 QSNLRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 73 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 132 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 133 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 179 >gi|51860463|gb|AAU11368.1| ribosomal protein small subunit 4 [Gnetum gnemonoides] Length = 198 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K P + R K S L+ KQK++ ++G ++E++ R Sbjct: 6 IRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSQHLACLQEKQKIRFHFG-LTERQLR 61 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A + +G T L+ LE RLD I+Y+ TI ARQ VNHRH+LVN VNI Sbjct: 62 QYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLAGTIPGARQLVNHRHILVNDYVVNIP 121 Query: 132 SYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 SYRCK DVI +K K+ + ++ E +P +++++ +I Sbjct: 122 SYRCKPQDVITIKGKNPDQLKTIITRNRNKARENKIPYHLTLDFSQNKGIVNKIIDRKD- 180 Query: 189 VPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 181 --IQLNIKEMLVIEYYSR 196 >gi|125662720|gb|ABN50310.1| small ribosomal protein 4 [Ephedra intermedia] Length = 195 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 14/201 (6%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+ K P + +H R K S + + L+ KQK++ +YG ++E++ Sbjct: 1 IRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTERQL 55 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V+I Sbjct: 56 RQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDI 115 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSS 185 SYRCK D+I +K K + + + VP Y++ N +I + Sbjct: 116 PSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDT 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 176 KD---LQLKIKEMLVIEYYSR 193 >gi|190361259|gb|ACE76934.1| ribosomal protein small subunit 4 [Trichomanes osmundoides] Length = 166 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S FG++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD IV+R Sbjct: 13 RKISQFGIRLEAKQRLRFNYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 71 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRH+LVN VNI SYRCK D+I ++ + + +++ Sbjct: 72 LGIAPTIPAARQLVNHRHILVNNHIVNIPSYRCKHNDLITLR-----------SQESSKK 120 Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++ + I + + LVVE+YSR Sbjct: 121 RIPDHLTFSSSEGNSPKGLVNGI---ANRESIDLNINELLVVEYYSR 164 >gi|17154719|emb|CAC83931.1| ribosomal protein S4 [Zephyra elegans] Length = 174 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTSKRP----RSGSDLKNQFRSGKRSQYRIRLEEKQKLRFHYG-LTEQQLLRYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K K + A + + ++P++++++ +I S + Sbjct: 116 KPRDIITTKDKQRSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172 Query: 195 MQ 196 + Sbjct: 173 IN 174 >gi|157154455|gb|ABV24934.1| ribosomal protein small subunit 4 [Asplenium trichomanes] Length = 178 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 11 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 70 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 129 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 130 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 176 >gi|23477324|gb|AAN34638.1| ribosomal protein small subunit 4 [Woodwardia fimbriata] gi|23477338|gb|AAN34645.1| ribosomal protein small subunit 4 [Woodwardia spinulosa] Length = 185 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN R V++ SYRCK D+I + + + L Sbjct: 77 VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LRGES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 136 PGGGETPDHLTASLSEGGRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183 >gi|51458187|gb|AAU03441.1| ribosomal protein small subunit 4 [Asplenium gemmiferum] Length = 189 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A +RG T L+ LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARGTRGSTGQVLLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L Sbjct: 81 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNA-LGNKS 139 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++ RI + + LVVE+YSR Sbjct: 140 LVGNKTPDHLTFAPSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 187 >gi|305672247|gb|ADM63547.1| ribosomal protein S4 [Brunia laevis] Length = 173 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 56 LLKYVRIAGKAKGSTGQVLLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILVNGRLVD 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D+I + + A + + ++P+++ + +I S Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIRNYLDSSPHEELPKHLILYPFQYKGLVNQIIDS 172 >gi|219973370|gb|ACL68571.1| ribosomal protein small subunit 4 [Marsilea minuta] Length = 187 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 13/193 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P +R Q K S + ++L AKQ+++ YG ++E++ + A Sbjct: 1 LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ Sbjct: 56 KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D I V+ + + + R ++P+++S + + ++ K + Sbjct: 116 DNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 172 Query: 194 IMQPNLVVEFYSR 206 + L+VE+YSR Sbjct: 173 NINELLIVEYYSR 185 >gi|110590038|gb|ABG77462.1| ribosomal protein small subunit 4 [Equisetum hyemale] gi|110590042|gb|ABG77464.1| ribosomal protein small subunit 4 [Equisetum hyemale subsp. affine] Length = 178 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q + K S +G++L AKQ+++ YG ++E++ + + A ++G T L+ LE RLD Sbjct: 9 QSIQKKISQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R FVPTI +ARQ +NHRH+LVN R V++ S+ CK D+I ++ + + + + Sbjct: 68 ILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDIITIEAPKTYQSILSKRLE 127 Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A+ +PE++++ + + + + LVVE+YSR Sbjct: 128 SFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 176 >gi|51458184|gb|AAU03440.1| ribosomal protein small subunit 4 [Asplenium elliottii] Length = 188 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L + Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNA-LRSKS 138 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++ RI + + LVVE+YSR Sbjct: 139 LVGDKTPDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|157154445|gb|ABV24929.1| ribosomal protein small subunit 4 [Asplenium viride] Length = 172 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 5 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 63 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 64 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSL 123 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 124 VGDKT-PDHLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 170 >gi|162415128|gb|ABX89138.1| ribosomal protein S4 [Didymodon giganteus] Length = 185 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E + + + A +++G T L+ L RLD +++R Sbjct: 24 KISQYRIRLEEKQKLRFHYG-ITEXQLLNYVRVARKAKGSTGXILLQLLXMRLDNVIFRL 82 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNH H+LVN VBI SYRCK D I + + K + + +++ Sbjct: 83 GMAPTIPGARQLVNHXHILVNNXIVBIPSYRCKPQDFITINDRKKSQXXIXKNVBFSQKS 142 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ N +I L + + LVV +YSR Sbjct: 143 KIPNHLTFNSLEKKGLINQI---LDQXSIGLKINELLVVXYYSR 183 >gi|194033318|ref|YP_002000439.1| ribosomal protein S4 [Oedogonium cardiacum] gi|156619064|gb|ABU88210.1| ribosomal protein S4 [Oedogonium cardiacum] gi|186968935|gb|ACC97258.1| ribosomal protein S4 [Oedogonium cardiacum] Length = 2801 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 19/175 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT-----------RSYGPGLHGQRRKSKPS--- 46 MS+ + +I RR+G + K P + PG HG+ + K Sbjct: 1 MSRYLGPRLRIVRRLGYLVGLTRKKPSTRLLNPDARRGIRKVLPPGQHGRSKSFKKKPYE 60 Query: 47 ----YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 F ++L+ KQ+++ +YG I+EK+ + ++A + +G T L+ LE RLD V+R Sbjct: 61 SNEYDFLIRLKLKQRIRYHYG-ITEKQLVNYVRQARKIKGSTGRVLLRLLEMRLDNTVFR 119 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 PTI AARQ + H H+ VN + V+I SY CK D+I K++ + + Sbjct: 120 LHMAPTIRAARQLITHGHIYVNNKKVSIPSYSCKPKDIITPAPKTRSIQLLNNFL 174 Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 21/99 (21%) Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV--------------- 170 R + + D +K+ + L +L+ D+P ++ + Sbjct: 2705 RIIYNRLFAKLRSDETLIKKWKQILTKILKKQLTPPLDIPPHLELKRIQISIIPTNIAKK 2764 Query: 171 NHDNMV---ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 N+ N++ T + +PS + + L+VE+YSR Sbjct: 2765 NNKNLIIPIGTVINLPSRK---TVGISVLERLIVEYYSR 2800 >gi|66866229|gb|AAY57784.1| small ribosomal protein 4 [Rhizogonium pennatum] Length = 207 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 13/204 (6%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + +I RR+G K P S + K S + ++L KQK++ +YG I+E Sbjct: 7 RVRIIRRLGTLPGLTNKIPQLKSSS---ISHSTSNKKISQYRIRLEEKQKLRFHYG-ITE 62 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + + A +++G T L+ LE R D +++R PTI ARQ VNHRH+LVN R Sbjct: 63 RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 122 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMVATFVR 181 V+I SYRCK D I +K + K + + ++ +P +++ N + Sbjct: 123 VDIPSYRCKPQDFITIKDQQKYQTIIXXXXXXKNIDFYQKYKIPNHLTYNLLEKKGLVNQ 182 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYS 205 I L + + L E+YS Sbjct: 183 I---LDRESIDLEINGLLGGEYYS 203 >gi|23477320|gb|AAN34636.1| ribosomal protein small subunit 4 [Woodwardia virginica] Length = 185 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN R V++ SYRCK D+I V+ + + L Sbjct: 77 VIFHLGMASTIPAARQLVNHRHILVNNRVVDVPSYRCKPKDIITVRNRPTSCNA-LRGES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++V+ RI + + LVVE+YSR Sbjct: 136 XGGGETPDHLTVSLSEGNRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183 >gi|51458176|gb|AAU03436.1| ribosomal protein small subunit 4 [Asplenium prolongatum] Length = 193 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 26 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 84 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 85 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRNKSL 144 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++ D I + + LVVE+YSR Sbjct: 145 VGDKT-PDHLTFALSEGDRPTGLVNCI---ANRESINLNINELLVVEYYSR 191 >gi|227439291|gb|ACP31322.1| ribosomal protein small subunit 4 [Pteridium caudatum] Length = 190 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P++++++ RI + + LVVE+YSR Sbjct: 142 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 188 >gi|118724415|gb|ABL10781.1| ribosomal protein small subunit 4 [Pellaea maxima] Length = 195 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRNEVPDHLTLSISKTSELTGLVNHM---ASR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|118724337|gb|ABL10742.1| ribosomal protein small subunit 4 [Pellaea rotundifolia] Length = 195 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLSGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T L+ LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVLLQLLEMRLDNVIFKLGMASTIPAARQLVSHRHILVNHRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D++ ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDILTIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|219973430|gb|ACL68601.1| ribosomal protein small subunit 4 [Marsilea oligospora] Length = 186 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 16 QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D+I ++ + + Sbjct: 75 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITIRNRPTSYNVLKGGVF 134 Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P+++S + + ++ K + + L+VE+YSR Sbjct: 135 ESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 184 >gi|165968063|gb|ABY75857.1| ribosomal protein small subunit 4 [Asplenium lamprophyllum] Length = 188 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + +++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALINKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ RI + + LVVE+YSR Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|17154599|emb|CAC83844.1| ribosomal protein S4 [Syringodea bifucata] Length = 175 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 10/183 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G + K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GASPGLTSKRP----RSGSDLKNQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K K + A + + + ++P +++++ +I S + Sbjct: 116 KPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQ 196 + Sbjct: 173 KIN 175 >gi|110590044|gb|ABG77465.1| ribosomal protein small subunit 4 [Equisetum arvense] Length = 178 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 9/181 (4%) Query: 30 RSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89 ++ G + Q + K S + ++L AKQ+++ YG ++E++ + + A ++G T L+ Sbjct: 1 KNQASG-NDQSNQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILL 58 Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 LE RLD I++R VPTI +ARQ +NHRH+LVN R V+I S+ CK D+I + Sbjct: 59 QLLEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSFHCKPKDIITIGAPKTY 118 Query: 150 LASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 + + + + A+ +P+++++ + + + + LVVE+YS Sbjct: 119 QSIITKRIEAFAKDQIPDHLTLSLSEQKKPKGFVNYLINR---ESIGLKINELLVVEYYS 175 Query: 206 R 206 R Sbjct: 176 R 176 >gi|26399124|sp|P59152|RR4_WOOUN RecName: Full=30S ribosomal protein S4, chloroplastic gi|23477340|gb|AAN34646.1| ribosomal protein small subunit 4 [Woodwardia unigemmata] Length = 185 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN R V++ SYRCK D+I V+ + + L+ Sbjct: 77 VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRNRPTSCNA-LKGES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 136 PGGGETPDHLTASLSEGSRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183 >gi|17154595|emb|CAC83836.1| ribosomal protein S4 [Schizostylis coccinea] Length = 177 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 8/183 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTS--PSKRSRSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 57 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 58 IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 117 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K K + A + L+ R ++P +++++ +I S + Sbjct: 118 KPRDIITTKNKQRSKALIQNFIDLSPRQGELPNHLTIDPFQYKGFVNQIIDSK---WIGL 174 Query: 194 IMQ 196 + Sbjct: 175 KIN 177 >gi|71679582|gb|AAZ38859.1| ribosomal protein small subunit 4 [Hymenophyllum javanicum] Length = 183 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 13 QSSSRKVSQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E + Sbjct: 72 IVFQLGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSRSKENIE 131 Query: 159 LAER-DVPEYISV----NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R +P++++ +++ I + + LVVE+YSR Sbjct: 132 FFRRKKIPDHLTFSFSEDNNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 181 >gi|51458192|gb|AAU03443.1| ribosomal protein small subunit 4 [Asplenium angustum] Length = 190 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ +NHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VLFHLGMASTIPAARQLINHRHILVNNCIVDIPSYRCKPKDLISVRNRLTSSNALRNKSL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + E+ P++++ RI + + LVVE+YSR Sbjct: 142 VGEKT-PDHLTFALSEDGRPTGLVNRI---ANRESINLNINELLVVEYYSR 188 >gi|51458182|gb|AAU03439.1| ribosomal protein small subunit 4 [Asplenium anisophyllum] Length = 191 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 24 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARRTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 83 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRNKSL 142 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++ RI + + LVVE+YSR Sbjct: 143 VGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 189 >gi|289576404|dbj|BAI77776.1| ribosomal protein small subunit 4 [Hymenophyllum cupressiforme] gi|289576428|dbj|BAI77788.1| ribosomal protein small subunit 4 [Hymenophyllum pumilum] Length = 189 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +N R Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 LPGLTSKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVI 194 D+I V+ + + E + R +P++++ + I + Sbjct: 119 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|51458119|gb|AAU03409.1| ribosomal protein small subunit 4 [Asplenium normale] Length = 176 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 9 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 68 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSI 127 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 128 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 174 >gi|38112446|gb|AAR11303.1| ribosomal protein S4 [Austrogramme marginata] Length = 191 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 2/189 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K + Q K S F ++L KQK++ YG ++E++ + A Sbjct: 3 LPGLTGKDKTSNSGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 ++RG T L+ LE RLD I++R TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 62 RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKP 121 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++++ + + + +P++++++ + + + + Sbjct: 122 KDIITIRKRPIFHTAAKD-EFIGRAGIPDHLTLSFSKAGEPVGLVNNMANRESVDLQINE 180 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 181 LLVVEYYSR 189 >gi|289576426|dbj|BAI77787.1| ribosomal protein small subunit 4 [Hymenophyllum bivalve] Length = 189 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +N R Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 LPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVI 194 D+I V+ + + E + R +P++++ + I + Sbjct: 119 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|17154592|emb|CAC79546.1| ribosomal protein S4 [Hesperantha pseudopilosa] Length = 177 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 8/183 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G + P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GASPGLTS--PSKRPRSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 57 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 58 IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 117 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K K + A + + + ++P +++++ +I S + Sbjct: 118 KPRDIITTKNKQRSKALIQNFIDSSPHQGELPNHLTIDPFQYKGLVNQIIDSK---WIGL 174 Query: 194 IMQ 196 + Sbjct: 175 KIN 177 >gi|51458180|gb|AAU03438.1| ribosomal protein small subunit 4 [Asplenium simplicifrons] Length = 190 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRVARRTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRNKSL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++ RI + + LVVE+YSR Sbjct: 142 VGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 188 >gi|165935727|gb|ABY75160.1| ribosomal protein S4 [Asplenium australasicum] Length = 188 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + ++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSVNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ P++++ RI + + LVVE+YSR Sbjct: 140 LGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|45271090|gb|AAS56929.1| ribosomal protein small subunit 4 [Asplenium scolopendrium] Length = 191 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 24 QSTSRKNFQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 83 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 142 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V+ R+ + + LVVE+YSR Sbjct: 143 VGDKT-PDHLTVSLSEGNRPTGLVNRV---ANRESINLNINELLVVEYYSR 189 >gi|184128075|gb|ACC67937.1| ribosomal protein small subunit 4 [Equisetum ramosissimum subsp. debile] Length = 170 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q + K S +G++L AKQ+++ YG ++E++ + + A ++G T L+ LE RLD Sbjct: 1 QSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R FVPTI +ARQ +NHRH+LVN R V++ S+ CK D+I + + + + + Sbjct: 60 ILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLE 119 Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A+ +PE++++ + + + + LVVE+YSR Sbjct: 120 SFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 168 >gi|118724453|gb|ABL10800.1| ribosomal protein small subunit 4 [Cheilanthes acrostica] Length = 195 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 2/195 (1%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKKNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD I+++ TI AARQ VNHRH+LVNG V+I Sbjct: 60 NYVRIARRTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNGHIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SYRCK D+I ++ + + L +VP++++++ + + + Sbjct: 120 SYRCKSKDIITIRNRPTSYNAAK-GKSLGRDEVPDHLTLSISKTSESTGLVNHTANRESV 178 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 179 NLDINELLVVEYHSR 193 >gi|219973336|gb|ACL68554.1| ribosomal protein small subunit 4 [Marsilea hirsuta] Length = 178 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 8 QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 66 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D+I V+ + + Sbjct: 67 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 126 Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P+++S + + ++ K + + L+VE+YSR Sbjct: 127 ESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDLNINELLIVEYYSR 176 >gi|99640045|emb|CAJ45146.1| putative ribosomal protein S4 gene [Sphaeropteris brunei] Length = 195 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 16/202 (7%) Query: 12 DRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 RR+ K+ P TR Q K S F ++L AKQ+++ YG ++E+ Sbjct: 1 IRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTERL 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V+ Sbjct: 56 LR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVD 114 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIPS 184 + SYRCK D+I V+ + + + R ++P++++ + RI Sbjct: 115 VPSYRCKPKDIITVRNRPTSYKGLRSGINESSRGDEIPDHLTFSLLEDNRPKGLVNRI-- 172 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 173 -ANRESIDLNINELLVVEYYSR 193 >gi|51458199|gb|AAU03446.1| ribosomal protein small subunit 4 [Asplenium affine] Length = 190 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q + S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 23 QSTSRRTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+ VN V+I SYRCK D I V+ + + L Sbjct: 82 VLFHLGMAXTIPAARQLVNHRHISVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LRXKS 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++V D R+ + + LVVE+YSR Sbjct: 141 LVGGKTPBHLTVSLSEGDRPXGLVNRV---ANRESINLNINELLVVEYYSR 188 >gi|26399122|sp|P59151|RR4_WOORA RecName: Full=30S ribosomal protein S4, chloroplastic gi|23477336|gb|AAN34644.1| ribosomal protein small subunit 4 [Woodwardia radicans] Length = 185 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN R V++ SYRCK D+I V+ + + L+ Sbjct: 77 VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRNRPTSCNA-LKGES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 136 PGGGETPDHLTASLSEGSRPTGLVNRI---ANRESVSLNINELLVVEYYSR 183 >gi|290467467|gb|ADD25851.1| small ribosomal protein 4 [Hymenophyllum dicranotrichum] Length = 187 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 13/192 (6%) Query: 21 GRPKSPVNTR--SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 G +N R P R+ S F ++L AKQ+++ YG +E++ + A Sbjct: 1 GLTNKKLNVREARIAPDQSSSRK---VSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ PTI AARQ VNHRH+LVN V+I SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNIVFQSGMSPTIPAARQLVNHRHILVNNHIVDIPSYRCKPK 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194 D+I V+ + + E + R +P++++ + I + Sbjct: 117 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|51458121|gb|AAU03410.1| ribosomal protein small subunit 4 [Asplenium normale] Length = 185 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+ G T + LE RLD Sbjct: 18 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTXGSTGQVPLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ Sbjct: 77 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKFI 136 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 137 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 183 >gi|18027948|gb|AAL55898.1| ribosomal protein S4 [Anogramma guatemalensis] Length = 191 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQK++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSSSKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+R TI AARQ VNHRH+LVN R VNI SYRCK D+I + +S +V++ Sbjct: 83 IVFRLGMASTIPAARQLVNHRHILVNHRIVNIPSYRCKPKDIITIPNRS-NFHNVMKDES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+++++ + + + VVE+YSR Sbjct: 142 IGGDVIPDHLTLYFSKTGEAAGLVNHM---ANRESVDLDINELFVVEYYSR 189 >gi|170516223|gb|ACB15113.1| small ribosomal protein 4 [Microbiota decussata] Length = 200 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 11/204 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI K+P R P + KPS + ++L+ KQ+++ +YG + E Sbjct: 1 RLKIISCFKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 58 RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRI 182 V+I SYRCK D+I +K+K + + + ++D VP +++ +I Sbjct: 118 VDIPSYRCKPQDLISIKEKEGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 178 IDNKR---IGLKINELLVVEYYSR 198 >gi|110590040|gb|ABG77463.1| ribosomal protein small subunit 4 [Equisetum laevigatum] Length = 178 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q + K S +G++L AKQ+++ YG ++E++ + + A ++G T L+ LE RLD Sbjct: 9 QSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARGAKGSTGQILLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R FVPTI +ARQ +NHRH+LVN R V++ S+ CK D+I + + + + + Sbjct: 68 ILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLE 127 Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A+ +PE++++ + + + + LVVE+YSR Sbjct: 128 SFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 176 >gi|290467489|gb|ADD25862.1| small ribosomal protein 4 [Hymenophyllum wilsonii] Length = 187 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G +N R Q K S F ++L AKQ+++ YG +E++ + A ++ Sbjct: 1 GLTNKKLNLREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKA 58 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+ Sbjct: 59 KGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDL 118 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQ 196 I V+ + + E ++R +P++++ + I + + Sbjct: 119 ITVRNRPSSYSGSKENIGFSQRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNIN 175 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 176 ELLVVEYYSR 185 >gi|563205|gb|AAB17600.1| ribosomal protein 4 [Mycobacterium bovis] gi|1589489|prf||2211287F ribosomal protein S4 Length = 132 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 74/135 (54%), Gaps = 3/135 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ + RR+ +L G + R Y PG HG+ R + Y LQL+ KQK + Sbjct: 1 MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 YG + EK+FR ++EA R G T L+ LESRLD ++YRA T ARQ V+H H Sbjct: 59 TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117 Query: 121 VLVNGRSVNIGSYRC 135 VNG VN+ SYR Sbjct: 118 FNVNGVHVNVPSYRV 132 >gi|17154481|emb|CAC83932.1| ribosomal protein S4 [Doryanthes excelsa] gi|17154717|emb|CAC83928.1| ribosomal protein S4 [Tecophilaea cyanocrocus] Length = 174 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K K + A + + ++P++++++ +I S + Sbjct: 116 KPRDIITTKDKQRSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172 Query: 195 MQ 196 + Sbjct: 173 IN 174 >gi|289449916|ref|YP_003475187.1| 30S ribosomal protein S4 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184463|gb|ADC90888.1| ribosomal protein S4 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 203 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 13/190 (6%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 ++ + K RR G N++G P + G + K S + QL KQK+K Y Sbjct: 5 ARSMGPRFKQSRRFGVNIFGNPNE-LKRGPKKDG------RKKESEYAKQLNEKQKLKLY 57 Query: 62 YGDISEKKFRSIFKEADR----SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 YG +SEK+ ++ ++A + S L++ LE RLD + YR F ++ ARQ V Sbjct: 58 YG-VSEKQMQNCMRKAKKQAQRSDMILGDILVTTLERRLDNLTYRLGFARSLRQARQMVV 116 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177 H H+ VNG+ V+I S+ C GD I V+ K+K+ + + VP Y+ +N +N+ Sbjct: 117 HGHIAVNGKKVDIPSFVCSVGDEISVRSKAKEFELIKANMEATSFVVP-YLQLNKENLQG 175 Query: 178 TFVRIPSSLK 187 P Sbjct: 176 FLTTYPQRAD 185 >gi|237797456|ref|ZP_04585917.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020306|gb|EGI00363.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 151 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 4/133 (3%) Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 K+A +G T NL+ LE RLD +VYR F T +RQ V+H+ V VNG++VN+ SY+ Sbjct: 22 KKAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLVSHKSVSVNGKTVNVPSYQ 81 Query: 135 CKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 + GDV+ +++K+K +++A L A+R E++ V+ + F +P+ Sbjct: 82 VRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKKSGVFKNVPARSD---LSA 138 Query: 194 IMQPNLVVEFYSR 206 + +L+VE YS+ Sbjct: 139 DINESLIVELYSK 151 >gi|18028058|gb|AAL55953.1| ribosomal protein S4 [Jamesonia scammanae] Length = 188 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 8/166 (4%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD I++R Sbjct: 26 KISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDNILFRL 84 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + + Sbjct: 85 GMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGESIGRDG 143 Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++++ R+ + + LVVEFYSR Sbjct: 144 IPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 186 >gi|51458110|gb|AAU03406.1| ribosomal protein small subunit 4 [Asplenium septentrionale subsp. caucasicum] Length = 188 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 8/170 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 82 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 + ++ P++++V D R+ + + LVVE+YS Sbjct: 142 VGDKT-PDHLTVSLSEGDRPPGLVNRV---ANRESINLNINELLVVEYYS 187 >gi|125662708|gb|ABN50304.1| small ribosomal protein 4 [Ephedra equisetina] Length = 199 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 14/205 (6%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDIS 66 + I R+ K P + +H R K S + + L+ KQK++ +YG ++ Sbjct: 1 RFIIISRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LT 55 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E++ R A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN Sbjct: 56 ERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHH 115 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVR 181 V+I SYRCK D+I +K K + + + VP Y++ N + Sbjct: 116 IVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNK 175 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 I + + ++ LV+E+YSR Sbjct: 176 IIDTKD---LQLKIKEMLVIEYYSR 197 >gi|157272411|gb|ABV27020.1| ribosomal protein small subunit 4-like protein [Azolla microphylla] gi|157272413|gb|ABV27021.1| ribosomal protein small subunit 4-like protein [Azolla mexicana] gi|157272415|gb|ABV27022.1| ribosomal protein small subunit 4-like protein [Azolla mexicana] gi|157272417|gb|ABV27023.1| ribosomal protein small subunit 4-like protein [Azolla mexicana] gi|157272425|gb|ABV27027.1| ribosomal protein small subunit 4-like protein [Azolla microphylla] gi|157272427|gb|ABV27028.1| ribosomal protein small subunit 4-like protein [Azolla microphylla] Length = 203 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ ++ + K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKSLPGLAGEASNAGETRVAADQSISTPKKISQFCVRLEAKQRLRYNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE RLD I++ PTI AARQ VNHRH+LVN Sbjct: 60 RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHLGMAPTIPAARQPVNHRHILVNDHI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181 V++ SYRCK D+I V+ + L + +P++++++ + Sbjct: 120 VDVPSYRCKPKDIITVRNRPTSLNGLKRTGIIESSRGNQIPDHLTLSFSEDNRPKGLVNK 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + VVE+YSR Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201 >gi|289576414|dbj|BAI77781.1| ribosomal protein small subunit 4 [Hymenophyllum imbricatum] Length = 188 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 9/191 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +N R Q K S F ++L AKQ+++ YG +E++ + A + Sbjct: 1 PGLTNKRLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARK 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKD 118 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIM 195 +I V+ + + E+ + + R +P++++ + I + + Sbjct: 119 LITVRNRPSSYSGSKESIEFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNI 175 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 176 NELLVVEYYSR 186 >gi|118724341|gb|ABL10744.1| ribosomal protein small subunit 4 [Pellaea falcata var. nana] Length = 195 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLSGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T L+ LE RLD ++++ TI AARQ V+HRHVLVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVLLQLLEMRLDNVIFKLGMASTIPAARQLVSHRHVLVNHRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D++ ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDILTIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|227439295|gb|ACP31324.1| ribosomal protein small subunit 4 [Pteridium caudatum] gi|227439401|gb|ACP31377.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pseudocaudatum] Length = 189 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 81 VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P++++++ RI + + LVVE+YSR Sbjct: 141 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 187 >gi|18028030|gb|AAL55939.1| ribosomal protein S4 [Jamesonia bogotensis] Length = 191 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 9/194 (4%) Query: 17 ENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 +L G + S + G Q K S F ++L KQ+++ YG ++E++ + Sbjct: 1 TSLPGLTGRDKTSNSLDFRVAGDQSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVR 59 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A ++RG T L+ LE RLD I++R TI AARQ VNHRH+LVN R V+I SYRC Sbjct: 60 IARKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRC 119 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYP 192 D+I ++ + ++ + + +P++++++ R+ Sbjct: 120 NPKDIITIRNRPISH-NMTKGESIGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESID 175 Query: 193 VIMQPNLVVEFYSR 206 + + VVEFYSR Sbjct: 176 LEINELFVVEFYSR 189 >gi|227439289|gb|ACP31321.1| ribosomal protein small subunit 4 [Pteridium caudatum] gi|227439315|gb|ACP31334.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pinetorum] gi|227439319|gb|ACP31336.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pinetorum] gi|227439321|gb|ACP31337.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pinetorum] gi|227439355|gb|ACP31354.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. capense] gi|227439357|gb|ACP31355.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. capense] gi|227439359|gb|ACP31356.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. capense] gi|227439361|gb|ACP31357.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. capense] gi|227439363|gb|ACP31358.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. capense] gi|227439365|gb|ACP31359.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. capense] gi|227439367|gb|ACP31360.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. centrali-africanum] gi|227439369|gb|ACP31361.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. centrali-africanum] gi|227439371|gb|ACP31362.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. centrali-africanum] gi|227439373|gb|ACP31363.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. decompositum] gi|227439375|gb|ACP31364.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439377|gb|ACP31365.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439379|gb|ACP31366.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439381|gb|ACP31367.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439383|gb|ACP31368.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439385|gb|ACP31369.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439387|gb|ACP31370.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439389|gb|ACP31371.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. japonicum] gi|227439391|gb|ACP31372.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. latiusculum] gi|227439393|gb|ACP31373.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. latiusculum] gi|227439395|gb|ACP31374.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. latiusculum] gi|227439397|gb|ACP31375.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. latiusculum] gi|227439399|gb|ACP31376.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. latiusculum] gi|227439403|gb|ACP31378.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pseudocaudatum] gi|227439405|gb|ACP31379.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pubescens] gi|227439407|gb|ACP31380.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pubescens] gi|227439415|gb|ACP31384.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|227439417|gb|ACP31385.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|227439419|gb|ACP31386.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|227439421|gb|ACP31387.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|227439423|gb|ACP31388.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|227439425|gb|ACP31389.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|227439427|gb|ACP31390.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|227439431|gb|ACP31392.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pubescens] gi|227439433|gb|ACP31393.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pubescens] gi|227439435|gb|ACP31394.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pseudocaudatum] Length = 190 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P++++++ RI + + LVVE+YSR Sbjct: 142 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 188 >gi|219973376|gb|ACL68574.1| ribosomal protein small subunit 4 [Marsilea mollis] gi|219973378|gb|ACL68575.1| ribosomal protein small subunit 4 [Marsilea mollis] Length = 179 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 9 QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D+I V+ + + Sbjct: 68 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 127 Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P+++S + + ++ K + + L+VE+YSR Sbjct: 128 ESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 177 >gi|17154715|emb|CAC83927.1| ribosomal protein S4 [Walleria mackenzii] Length = 174 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K K + A + + ++P++++++ +I S + Sbjct: 116 KPRDIITTKDKERSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172 Query: 195 MQ 196 + Sbjct: 173 IN 174 >gi|16930546|gb|AAL31954.1| ribosomal protein small subunit 4 [Stenochlaena milnei] Length = 177 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 8/160 (5%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 L+L AKQ+++ YG ++E++ + A ++RG T + LE RLD +++ TI Sbjct: 21 LRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDNVIFHLGMASTI 79 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 AARQ VNHRH+LVN R V+I SYRCK D+I ++ +S + L P++++ Sbjct: 80 PAARQLVNHRHILVNNRIVDIPSYRCKPKDIITLRNQS-TFCNALRGESPGGGKTPDHLT 138 Query: 170 VNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V+ RI + + LVVE+YSR Sbjct: 139 VSLSEGNRPTGVVNRI---ANRESVNLNINELLVVEYYSR 175 >gi|23477322|gb|AAN34637.1| ribosomal protein small subunit 4 [Woodwardia auriculata] Length = 185 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN R V++ SYRCK D+I V+ + + L Sbjct: 77 VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRNRPTSCNA-LRGES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 136 PGGGETPDHLTASLSEGNRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183 >gi|29422411|gb|AAO84601.1| small ribosomal protein 4 [Anacolia laevisphaera] Length = 144 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 4/143 (2%) Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH+LVN Sbjct: 3 ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 62 Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183 V+I SYRCK D I +K + K + + ++ +P +++ N +I Sbjct: 63 DHIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI- 121 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 L + + LVVE+YSR Sbjct: 122 --LDRESIGLKINELLVVEYYSR 142 >gi|45271084|gb|AAS56927.1| ribosomal protein small subunit 4 [Saccoloma inaequale] Length = 174 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A +++G T + LE RLD Sbjct: 7 QSGSKKISQFCVRLEAKQRLRFSYG-LTERQPLNYVRIARKTKGSTGQVSLQLLEMRLDN 65 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI ARQ VNHRH+LVN R V+I SYRC+ D+I V+ + ++VL + Sbjct: 66 VIFHPGVASTIPCARQLVNHRHILVNNRIVDIPSYRCEPKDIITVRNRPTS-SNVLRNAS 124 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++++ RI + + LVVE+YSR Sbjct: 125 FGRDKIPDHLTLSLTEGSRPTGLVNRI---ANRESVDLNINELLVVEYYSR 172 >gi|310707173|gb|ADP08972.1| Rps4 [Saccoloma elegans] Length = 173 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A +++G T + LE RLD Sbjct: 6 QSGSKKISQFCVRLEAKQRLRFSYG-LTERQPLNYVRIARKTKGSTGQVSLQLLEMRLDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN R V+I SYRC+ D+I V+ + ++VL + Sbjct: 65 VIFHPGVASTIPAARQLVNHRHILVNNRIVDIPSYRCEPKDIITVRNRPTS-SNVLRNAS 123 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++++ + RI + + LVVE+YSR Sbjct: 124 FGRDKIPDHLTLSLTEGNRPTGLVNRI---ANRESVDLNINELLVVEYYSR 171 >gi|111283706|gb|ABH09203.1| small ribosomal protein 4 [Neogrollea notabilis] Length = 170 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 5/172 (2%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I RR+G K+ Y K S + ++L KQK++ +YG ++E++ Sbjct: 1 IIRRLGALPGLTNKTLKPKSGY---NDRSTSNRKVSQYRIRLEEKQKLRFHYG-LTERQL 56 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 57 LKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHITINDNIVDI 116 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181 SY C+ GD I ++ K K + + + L + +P +++ + + + + Sbjct: 117 PSYNCQPGDFIIIRDKQKSQSIITKNFNLFQNSKIPSHLTFDSIKLYGSINQ 168 >gi|16565372|gb|AAL26202.1|AF313600_1 small ribosomal protein 4 [Salvinia molesta] gi|99640366|emb|CAJ45117.1| putative ribosomal protein S4 gene [Salvinia oblongifolia] Length = 201 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 12/205 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K P + Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKSLPGLAGKIPNPRETRI--AADQSTPKKISQFCVRLEAKQRLRYNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE RLD I++ PTI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHLGMAPTIPAARQSVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEA---SQLAERDVPEYISVNHDN---MVATFVR 181 V++ SYRCK D I V+ + + S + +P++++++ + Sbjct: 118 VDVPSYRCKPRDTITVRNRPTSINSSKRSDIVESSRGNLIPDHLTLSFSEDNRPRGLVNQ 177 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + VVE+YSR Sbjct: 178 TATR---ESIDLNINELSVVEYYSR 199 >gi|157154425|gb|ABV24919.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154429|gb|ABV24921.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154431|gb|ABV24922.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154433|gb|ABV24923.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154435|gb|ABV24924.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154439|gb|ABV24926.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154441|gb|ABV24927.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154443|gb|ABV24928.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154447|gb|ABV24930.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154449|gb|ABV24931.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154451|gb|ABV24932.1| ribosomal protein small subunit 4 [Asplenium viride] gi|157154453|gb|ABV24933.1| ribosomal protein small subunit 4 [Asplenium adulterinum] Length = 178 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 11 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 70 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSL 129 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 130 VGDKT-PDHLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 176 >gi|237688497|ref|YP_002905116.1| ribosomal protein S4 [Picea sitchensis] gi|226875325|gb|ACO89064.1| ribosomal protein S4 [Picea sitchensis] Length = 201 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 9/207 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+ K P N + + K S + ++ KQK++ Sbjct: 1 MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A R++G T NH H Sbjct: 57 HYG-LTERQLLKYVRIARRAKGSTGQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHVH 115 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179 + VN V+I SY CK DVI ++ + + A + + L +RD +P +++ + Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNLDLFQRDKLPNHLTFHSLQYKGFI 175 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199 >gi|108861090|gb|ABG21417.1| ribosomal protein small subunit 4 [Marsilea minuta] Length = 185 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 15 QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--A 156 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D I V+ + + Sbjct: 74 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDNITVRNRPTSYNVLKGGVF 133 Query: 157 SQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+++S + + ++ K + + L+VE+YSR Sbjct: 134 ESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDLNINELLIVEYYSR 183 >gi|219973384|gb|ACL68578.1| ribosomal protein small subunit 4 [Marsilea mollis] Length = 188 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 18 QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLIYVRIARKTKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D+I V+ + + Sbjct: 77 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 136 Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P+++S + + ++ K + + L+VE+YSR Sbjct: 137 ESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 186 >gi|311901206|gb|ADQ13153.1| small ribosomal protein 4 [Nephrolepis rivularis] Length = 177 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 10 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ Sbjct: 69 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNALRAKFP 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++ + I + + LVVE+YSR Sbjct: 129 VGDKT-PDHLTFXLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 175 >gi|124021092|gb|ABM88819.1| small ribosomal protein subunit 4 [Aneura pinguis] Length = 176 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 10 STSNKKTSQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157 ++R VPTI AARQ VNHRHV +N ++I SY C+ GD+I + + K + + Sbjct: 69 TIFRLGMVPTIPAARQLVNHRHVSINDHIIDIPSYNCRPGDIITINTREKFRLVNWRDMN 128 Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + ++P +++ + + + +I + + LVVE+YSR Sbjct: 129 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 174 >gi|157272407|gb|ABV27018.1| ribosomal protein small subunit 4-like protein [Azolla caroliniana] Length = 203 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ ++ + K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKSLPGLAGEASNAGETRVAADQSISTPKKISQFCVRLEAKQRLRYNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE RLD I++ PTI AARQ VNHRH+LVN Sbjct: 60 RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNILFHLGMAPTIPAARQPVNHRHILVNDHI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181 V++ SYRCK D+I V+ + L + +P+++S++ + Sbjct: 120 VDVPSYRCKPKDIITVRNRPTSLNGLKRTGIIESFRGNQIPDHLSLSFSEDNRPKGLVNK 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + VVE+YSR Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201 >gi|290467477|gb|ADD25856.1| small ribosomal protein 4 [Hymenophyllum peltatum] Length = 182 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 13 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E + Sbjct: 72 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDIITVRNRPSSYSGSKETIE 131 Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + + LVVE+YSR Sbjct: 132 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 180 >gi|246880741|gb|ACS95053.1| ribosomal protein S4 [Dunaliella salina] Length = 252 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 18/175 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRKSK------ 44 M++ K KI RRIG+ K P + PG HG + K Sbjct: 1 MARYIGPKLKIIRRIGKLRGLTRKKPFRRVYRGRGPLRGKVIPPGQHGLIKLFKTRPYDS 60 Query: 45 -PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 S + ++L+ KQ+++ YG ++E++ + ++A + + T L+ LE RLD IV+R Sbjct: 61 CESDYLIRLKVKQRLRYNYG-LTERQLVNYVRKAKKIKEATGQVLLQLLEMRLDNIVFRL 119 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 PTI AARQ+++H H+ VN + VNI SY CK DVI V K K L + Sbjct: 120 NMAPTIVAARQYISHGHIRVNNKKVNIPSYMCKPKDVISVAMKEKSLILINRNLN 174 >gi|18027946|gb|AAL55897.1| ribosomal protein S4 [Pityrogramma austroamericana] Length = 191 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 2/168 (1%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S F ++L KQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 SSASKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVSLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+R TI AARQ VNHRH+LVN R V+I SYRCK D+I ++ + +V++ Sbjct: 83 IVFRLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPKDLITIRNRPTSR-NVVKGES 141 Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ T + + + VVE+YSR Sbjct: 142 IGRDGIPDHLTLSFSKAGETAAVVNHMANRESVDLDINELFVVEYYSR 189 >gi|311901182|gb|ADQ13141.1| small ribosomal protein 4 [Nephrolepis cordifolia] gi|311901184|gb|ADQ13142.1| small ribosomal protein 4 [Nephrolepis cordifolia] gi|311901190|gb|ADQ13145.1| small ribosomal protein 4 [Nephrolepis exaltata] Length = 178 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 70 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 129 PGKDKTPDHLTISLSEANKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|23477328|gb|AAN34640.1| ribosomal protein small subunit 4 [Woodwardia japonica] Length = 185 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN R V++ SYRCK D+I + + + L Sbjct: 77 VIFRLXMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LGGES 135 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ D RI + + LVVE+YSR Sbjct: 136 PGGGETPDHLTASLSEGDRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183 >gi|165935729|gb|ABY75161.1| ribosomal protein S4 [Asplenium flaccidum] gi|165935733|gb|ABY75163.1| ribosomal protein S4 [Asplenium shuttleworthianum] gi|165968067|gb|ABY75859.1| ribosomal protein small subunit 4 [Asplenium difforme] Length = 188 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ RI + + LVVE+YSR Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|290467487|gb|ADD25861.1| small ribosomal protein 4 [Hymenophyllum tortuosum] Length = 187 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 18 QSSSKKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKTKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ +S + + S+ Sbjct: 77 IVFQLGMSTTIPAARQLVNHRHILVNNNIVDIPSYRCKPKDLITLRNRSSSYSGSKKNSE 136 Query: 159 LAE-RDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P++++ + I + + LVVE+YSR Sbjct: 137 FSRIKKIPDHLTFSFSEGNIPKGLVNGI---ANRESINLNINELLVVEYYSR 185 >gi|290467481|gb|ADD25858.1| small ribosomal protein 4 [Hymenophyllum rarum] Length = 187 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 18 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E Sbjct: 77 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 136 Query: 159 LAER-DVPEYIS--VNHDNM-VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + DNM I + + LVVE+YSR Sbjct: 137 FSRRKKIPDHLTFSFSEDNMPKGLVNGI---ANRESIDLNINELLVVEYYSR 185 >gi|18028010|gb|AAL55929.1| ribosomal protein S4 [Jamesonia goudotii] Length = 190 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 23 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I + + ++ + Sbjct: 82 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + VVEFYSR Sbjct: 141 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 188 >gi|219973372|gb|ACL68572.1| ribosomal protein small subunit 4 [Marsilea minuta] Length = 184 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 9/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 14 QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ PTI AARQ VNHRH+LVN R V++ SYRC+ D I V+ + + Sbjct: 73 IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDNITVRNRPTSYNVLKGGVF 132 Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P+++S + + ++ K + + L+VE+YSR Sbjct: 133 ESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDLNINELLIVEYYSR 182 >gi|156619652|gb|ABU88440.1| small ribosomal protein 4 [Aneura sp. Shaw 675] gi|156619654|gb|ABU88441.1| small ribosomal protein 4 [Aneura sp. Shaw 697] gi|156619668|gb|ABU88448.1| small ribosomal protein 4 [Aneura pinguis] Length = 172 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 6/168 (3%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 9 STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R VPTI AARQ VNHRHV +N ++I SY CK GDVI + + K + + Q Sbjct: 68 TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNMNSLQ 127 Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ + V + +I + + LVVE+YSR Sbjct: 128 --KPAIPNHLTFDSKEFVGSVQQIIDRD---WIYLKINELLVVEYYSR 170 >gi|37992727|gb|AAR06542.1| small ribosomal protein 4 [Zelometeorium patulum] Length = 172 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 8 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 66 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD I++R PTI ARQ VNHRH+LVN V+I SYRCK D + +K + K + + Sbjct: 67 LDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFVTIKNQRKSETIISK 126 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 + ++ +P +++ +I L + + LVVE+ Sbjct: 127 NIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIGLKINELLVVEY 172 >gi|45271070|gb|AAS56923.1| ribosomal protein small subunit 4 [Bolbitis heteroclita] Length = 191 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ V+HRH+LVN R V+I SYR K D+ + + + Sbjct: 83 VIFHLGMASTIPAARQLVSHRHILVNNRIVDIPSYRRKPRDITTTRNRPTSYNAPKGKFP 142 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +VP++++V D + RI + + LVVE+YSR Sbjct: 143 GGD-NVPDHLAVSLSEGDRLTGLVNRI---ANRESVNLNINELLVVEYYSR 189 >gi|18028022|gb|AAL55935.1| ribosomal protein S4 [Eriosorus sp. Sanchez-Baracado 329] Length = 190 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 23 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I + + ++ + Sbjct: 82 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + VVEFYSR Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 188 >gi|165968065|gb|ABY75858.1| ribosomal protein small subunit 4 [Asplenium milnei] gi|165968069|gb|ABY75860.1| ribosomal protein small subunit 4 [Asplenium surrogatum] Length = 188 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ S Sbjct: 80 VLFHLGMASTISAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ RI + + LVVE+YSR Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|227439317|gb|ACP31335.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. pinetorum] Length = 186 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L LE RLD Sbjct: 19 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 78 VIFXLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P++++++ RI + + LVVE+YSR Sbjct: 138 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 184 >gi|51458148|gb|AAU03423.1| ribosomal protein small subunit 4 [Asplenium hallbergii] Length = 189 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A +RG T + LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARGTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYR K D I V+ ++ ++ S Sbjct: 81 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRRKPRDFITVRNRATSCNALRSKSP 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++V D R+ + + LVVE+YSR Sbjct: 141 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|156619656|gb|ABU88442.1| small ribosomal protein 4 [Aneura sp. Shaw 725] gi|156619658|gb|ABU88443.1| small ribosomal protein 4 [Aneura sp. Shaw 702] Length = 175 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 9 STSNKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157 ++R VPTI AARQ VNHRHV +N ++I SY C+ GD+I + + K + + Sbjct: 68 TIFRLGMVPTIPAARQLVNHRHVSINDHIIDIPSYNCRPGDIITINTREKFRLVNWRDMN 127 Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + ++P +++ + + + +I + + LVVE+YSR Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 173 >gi|18028026|gb|AAL55937.1| ribosomal protein S4 [Jamesonia bogotensis] gi|18028028|gb|AAL55938.1| ribosomal protein S4 [Jamesonia bogotensis] Length = 191 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + VVEFYSR Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESIDLEINELFVVEFYSR 189 >gi|51458172|gb|AAU03434.1| ribosomal protein small subunit 4 [Asplenium flaccidum] Length = 191 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 24 QSTSRKIXQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ S Sbjct: 83 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 142 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ RI + + LVVE+YSR Sbjct: 143 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 189 >gi|110590036|gb|ABG77461.1| ribosomal protein small subunit 4 [Equisetum bogotense] Length = 178 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q + K S + ++L AKQ+++ YG ++E++ + + A ++G T L+ LE RLD Sbjct: 9 QSIQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R VPTI +ARQ +NHRH+LVN R V++ S+ CK D+I + + + + + Sbjct: 68 ILFRLGVVPTIPSARQLINHRHILVNDRIVDVPSFHCKPKDIITIGAPKIYQSIITKRIE 127 Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 A+ +P+++++ + + + + LVVE+YSR Sbjct: 128 SFAKDQIPDHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 176 >gi|52788787|gb|AAU87374.1| ribosomal protein small subunit 4 [Azolla filiculoides] gi|157272421|gb|ABV27025.1| ribosomal protein small subunit 4-like protein [Azolla filiculoides] Length = 203 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ ++ + K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKSLPGLAGEASNVGETRVAADQSTSTPKKISQFCVRLEAKQRLRYNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE RLD I++ PTI AARQ VNHRH+LVN R Sbjct: 60 RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHLGIAPTIPAARQPVNHRHILVNDRI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181 V++ SYRCK D+I ++ + L + +P++++++ + Sbjct: 120 VDVPSYRCKPKDIITIRNRPTSLNGLKRTGIFESSRGNQIPDHLTLSFSEDNRPKGLVNK 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + VVE+YSR Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201 >gi|115350017|ref|YP_764373.1| ribosomal protein S4 [Stigeoclonium helveticum] gi|122165174|sp|Q06SJ3|RR4_STIHE RecName: Full=30S ribosomal protein S4, chloroplastic gi|98990231|gb|ABF60198.1| ribosomal protein S4 [Stigeoclonium helveticum] Length = 2922 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 19/185 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVN-----------TRSYGPGLHGQRRKSKPS--- 46 MS+ + +I RR+G K P + PG HG+ + K Sbjct: 1 MSRYLGPRLRITRRLGHLSGLTRKKPAFKPLNPVNPFGPRKIIPPGEHGRNKSFKKKPYE 60 Query: 47 ----YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 + ++L+ KQ+++ +YG ++E++ ++A + +G T L+ LE RLD IV+R Sbjct: 61 SCEYDYLIRLKLKQRLRFHYG-LTERQLVRYVQQAKKIKGSTGRVLLRLLEMRLDNIVFR 119 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ ++H H+L+N + V I SY+C+ D+I V K + V +R Sbjct: 120 LHMAPTIKAARQLISHGHILINKKKVTIPSYQCEPKDIITVAPKIISMELVSRFLSEFDR 179 Query: 163 DVPEY 167 + Y Sbjct: 180 EKSRY 184 >gi|18027980|gb|AAL55914.1| ribosomal protein S4 [Eriosorus hispidulus] Length = 191 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I + + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + VVEFYSR Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 189 >gi|52788801|gb|AAU87378.1| ribosomal protein small subunit 4 [Leptopteris hymenophylloides] Length = 186 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 17 QSASKKISQFCIRLEAKQRLRFNYGS-TERQLLRYVRIARKAKGSTGQVLLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV PTI AARQ VNHRH+LVN V+I SYRCK D+ V+ ++ + + + Sbjct: 76 IVPELGMAPTIPAARQSVNHRHILVNDHIVDIPSYRCKPRDITTVRDRTSSYDRITKEIE 135 Query: 159 LAERD-VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + +P++++++ RI + + + LVVE+YSR Sbjct: 136 SSQGEKIPDHLTLSLSGGNRPKGLVNRIVNRD---SIRLNINELLVVEYYSR 184 >gi|156619650|gb|ABU88439.1| small ribosomal protein 4 [Aneura sp. Shaw 657] Length = 175 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 9 STSNKKTSQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157 ++R VPTI AARQ VNHRHV +N ++I SY C+ GD+I + + K + + Sbjct: 68 TIFRLGMVPTIPAARQLVNHRHVSINDHIIDIPSYNCRPGDIITINTREKFRLVNWRDIN 127 Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + ++P +++ + + + +I + + + LVVE+YSR Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIINRD---WIYLKINELLVVEYYSR 173 >gi|18027974|gb|AAL55911.1| ribosomal protein S4 [Eriosorus flexuosus] Length = 189 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 22 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I + + ++ + Sbjct: 81 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 139 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + VVEFYSR Sbjct: 140 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 187 >gi|18027970|gb|AAL55909.1| ribosomal protein S4 [Eriosorus flexuosus] Length = 190 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 23 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 82 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + VVEFYSR Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 188 >gi|311901210|gb|ADQ13155.1| small ribosomal protein 4 [Nephrolepis undulata] Length = 177 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 10 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 69 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 127 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 128 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 175 >gi|290467485|gb|ADD25860.1| small ribosomal protein 4 [Hymenophyllum rugosum] Length = 186 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 17 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+ VN V+I SYRCK D+I V+ + + E Sbjct: 76 IVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 135 Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + + LVVE+YSR Sbjct: 136 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 184 >gi|219973324|gb|ACL68548.1| ribosomal protein small subunit 4 [Marsilea ancylopoda] Length = 170 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 9/172 (5%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S + ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD I Sbjct: 1 STSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNI 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 V++ PTI AARQ VNHRH+LVN R V++ SYRC+ D+I V+ + + Sbjct: 60 VFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSNNVLKGGVFE 119 Query: 160 AER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R ++P+++S + + ++ K + + L+VE+YSR Sbjct: 120 SSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 168 >gi|71679578|gb|AAZ38857.1| ribosomal protein small subunit 4 [Hymenophyllum flexuosum] Length = 183 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 14 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E + Sbjct: 73 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIE 132 Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + + LVVE+YSR Sbjct: 133 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 181 >gi|125662682|gb|ABN50291.1| small ribosomal protein 4 [Fokienia hodginsii] Length = 197 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I R+ K+P + P + KPS + ++L+ KQ+++ +YG + E++ Sbjct: 1 IINRLKTLPGLSKKTP--NKIQKPFKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 58 LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSS 185 SYRCK D+I +K+K + + + ++D VP +++ +I + Sbjct: 118 PSYRCKPRDLISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKIIDN 177 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 KR---IGLKINELLVVEYYSR 195 >gi|18027988|gb|AAL55918.1| ribosomal protein S4 [Eriosorus rufescens] gi|18027990|gb|AAL55919.1| ribosomal protein S4 [Eriosorus rufescens] gi|18027998|gb|AAL55923.1| ribosomal protein S4 [Eriosorus congestus] gi|18028000|gb|AAL55924.1| ribosomal protein S4 [Eriosorus novogranatensis] gi|18028002|gb|AAL55925.1| ribosomal protein S4 [Eriosorus novogranatensis] gi|18028006|gb|AAL55927.1| ribosomal protein S4 [Jamesonia goudotii] gi|18028008|gb|AAL55928.1| ribosomal protein S4 [Jamesonia goudotii] gi|18028012|gb|AAL55930.1| ribosomal protein S4 [Jamesonia peruviana] gi|18028014|gb|AAL55931.1| ribosomal protein S4 [Jamesonia peruviana] gi|18028016|gb|AAL55932.1| ribosomal protein S4 [Jamesonia peruviana] Length = 191 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I + + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + VVEFYSR Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 189 >gi|311901208|gb|ADQ13154.1| small ribosomal protein 4 [Nephrolepis undulata] Length = 178 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 70 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 129 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|157272429|gb|ABV27029.1| ribosomal protein small subunit 4-like protein [Azolla rubra] Length = 203 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ ++ + K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKSLPGLAGEASNVGETRVAADQSTSTPKKISQFCVRLEAKQRLRYNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T + LE RLD I++ PTI AARQ VNHRH+LVN R Sbjct: 60 RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHLGIAPTIPAARQPVNHRHILVNDRI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181 V++ SYRCK D+I ++ + L + +P++++++ + Sbjct: 120 VDVPSYRCKPKDIITIRNRPTSLNGLKRTGIIESSRGNQIPDHLTLSFSEDNRPKGLVNK 179 Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + VVE+YSR Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201 >gi|304322977|ref|YP_003795515.1| ribosomal protein S4 [Floydiella terrestris] gi|270048176|gb|ACZ58471.1| ribosomal protein S4 [Floydiella terrestris] Length = 3123 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 31/205 (15%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPV-----------NTRSYGPGLHGQRRKSKPS--- 46 MS+ + +I RR+G + K P + PG HG+ + K Sbjct: 29 MSRYLGPRLRITRRLGTLIGFTRKKPTMKPLYPENPFGLRKVIPPGQHGRAKLFKKKPYE 88 Query: 47 ----YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 F ++L+ KQ+++ YYG I+EK+ + + A +S+G T L+ LE RLD IV+R Sbjct: 89 SNEYDFLIRLKFKQRLRYYYG-ITEKQLFNYVELARKSKGSTGLVLLRLLEMRLDNIVFR 147 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ ++H H+LVN + V I S +CK D+I K + + V + Sbjct: 148 LHMAPTIAAARQLISHGHILVNKKKVTIPSAQCKPKDLITAAPKIRSMELVSRFLK---- 203 Query: 163 DVPEYISVNHDNMVATFVRIPSSLK 187 + + A F RI + L+ Sbjct: 204 ------EFDMEK--ARFNRIVNILQ 220 >gi|18027968|gb|AAL55908.1| ribosomal protein S4 [Eriosorus flexuosus] gi|18027972|gb|AAL55910.1| ribosomal protein S4 [Eriosorus flexuosus] gi|18027976|gb|AAL55912.1| ribosomal protein S4 [Eriosorus cheilanthoides] gi|18027978|gb|AAL55913.1| ribosomal protein S4 [Eriosorus cheilanthoides] gi|18027982|gb|AAL55915.1| ribosomal protein S4 [Eriosorus hispidulus] gi|18027984|gb|AAL55916.1| ribosomal protein S4 [Eriosorus lindigii] gi|18027986|gb|AAL55917.1| ribosomal protein S4 [Jamesonia cuatrecasasii] Length = 191 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I + + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + VVEFYSR Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 189 >gi|51458157|gb|AAU03427.1| ribosomal protein small subunit 4 [Asplenium yunnanense] Length = 194 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++ A+Q+ + YG ++E++ + A R+RG T + LE RLD Sbjct: 27 QSTSRKISQFCVRXEAQQRXRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 85 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ Sbjct: 86 VLFHLGIASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGNKYL 145 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++ P++++V D R+ + + LVVE+YSR Sbjct: 146 LGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 192 >gi|290467469|gb|ADD25852.1| small ribosomal protein 4 [Hymenophyllum dimidiatum] Length = 187 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 13/192 (6%) Query: 21 GRPKSPVNTR--SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 G +N R P R+ S F ++L AKQ+++ YG +E++ + A Sbjct: 1 GLTNKKLNVREARIAPDQSSSRK---VSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 57 KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194 D+I V+ + + E + R +P++++ + I Sbjct: 117 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFN 173 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 INELLVVEYYSR 185 >gi|227439309|gb|ACP31331.1| ribosomal protein small subunit 4 [Pteridium esculentum] Length = 190 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ G ++E++ + A ++RG T L LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNSG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P+++++ RI + + LVVE+YSR Sbjct: 142 LGEK-IPDHLTLSLSEGSKPTGLVNRI---ASRESVNLNINELLVVEYYSR 188 >gi|118724489|gb|ABL10818.1| ribosomal protein small subunit 4 [Cheilanthes tomentosa] Length = 197 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNM---VATFVRIPSSLK 187 SYRCK D+I ++ ++ +V + +VP++++++ M + Sbjct: 120 SYRCKPKDIITIRNRTTSYNAVKVKGESFGRDEVPDHLTLSISKMSEPTGLVNHM---AN 176 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 177 RESVNLDINELLVVEYHSR 195 >gi|18028004|gb|AAL55926.1| ribosomal protein S4 [Eriosorus longipetiolatus] Length = 186 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 19 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I + + ++ + Sbjct: 78 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + VVEFYSR Sbjct: 137 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 184 >gi|118724413|gb|ABL10780.1| ribosomal protein small subunit 4 [Pellaea longipilosa] Length = 195 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A +RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARXTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + + L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-SKSLGRNEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|99639895|emb|CAJ45113.1| putative ribosomal protein S4 gene [Cyathea australis] Length = 196 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%) Query: 11 IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 + RR+ K+ P TR Q K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V Sbjct: 56 LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIV 114 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISV---NHDNMVATFVRIP 183 ++ SYRCK D+I V+ + + + R +P++++ + RI Sbjct: 115 DVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDQIPDHLTFSLLEGNRPKGLVNRI- 173 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 174 --ANRESIDLNINELLVVEYYSR 194 >gi|18027966|gb|AAL55907.1| ribosomal protein S4 [Eriosorus insignis] Length = 191 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + VVEFYSR Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 189 >gi|311901186|gb|ADQ13143.1| small ribosomal protein 4 [Nephrolepis davalliae] Length = 172 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 5 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVLLQLLEMRLDN 63 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 64 VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 122 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 123 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 170 >gi|156619634|gb|ABU88431.1| small ribosomal protein 4 [Aneura mirabilis] gi|156619636|gb|ABU88432.1| small ribosomal protein 4 [Aneura mirabilis] gi|156619638|gb|ABU88433.1| small ribosomal protein 4 [Aneura mirabilis] gi|156619640|gb|ABU88434.1| small ribosomal protein 4 [Aneura mirabilis] gi|156619642|gb|ABU88435.1| small ribosomal protein 4 [Aneura mirabilis] gi|156619644|gb|ABU88436.1| small ribosomal protein 4 [Aneura mirabilis] gi|156619646|gb|ABU88437.1| small ribosomal protein 4 [Aneura mirabilis] Length = 175 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 9 STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R VPTI AARQ VNHRHV +N ++I SY CK GDVI + + K Sbjct: 68 TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVDRRDMN 127 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ ++P +++ + + + +I + + LVVE+YSR Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIDLKINELLVVEYYSR 173 >gi|32401904|gb|AAP80940.1| small ribosomal protein 4 [Chamaecyparis obtusa] Length = 194 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 11/198 (5%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P R P + KPS + ++L+ KQ+++ +YG + E++ Sbjct: 1 RLKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 58 VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKD 188 RCK D+I +K+K + + + ++D VP +++ +I + + Sbjct: 118 RCKPQDLISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKAQYSGLVKKIIDNKR- 176 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 177 --IGLKINELLVVEYYSR 192 >gi|311901170|gb|ADQ13135.1| small ribosomal protein 4 [Nephrolepis biserrata] gi|311901172|gb|ADQ13136.1| small ribosomal protein 4 [Nephrolepis biserrata] gi|311901174|gb|ADQ13137.1| small ribosomal protein 4 [Nephrolepis biserrata] gi|311901176|gb|ADQ13138.1| small ribosomal protein 4 [Nephrolepis biserrata] gi|311901178|gb|ADQ13139.1| small ribosomal protein 4 [Nephrolepis biserrata] Length = 178 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 70 VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+++++ + I + + LVVE+YSR Sbjct: 129 PRKDKIPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|118724515|gb|ABL10831.1| ribosomal protein small subunit 4 [Llavea cordifolia] Length = 187 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 20 QSASKKIXQFCVRLEAKQRLRFNYG-LTERQLLKYVRVAKKTRGSTGQVLLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI AARQ V+HRH+LVN V+I SYR K D++ ++ + + + Sbjct: 79 IIFQLGMASTIPAARQLVSHRHILVNDHIVDIPSYRRKPKDILTIRNRPTSRNAAK-SES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + P+++ ++ + + + + LVVE+YSR Sbjct: 138 LGGNETPDHLILSLPKNGEPTGLVNHMVNR---ESVDLNINELLVVEYYSR 185 >gi|118724409|gb|ABL10778.1| ribosomal protein small subunit 4 [Pellaea doniana] Length = 195 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD ++++ V TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMVSTIPAARQLVNHRHILVNHRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRNEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 176 ESVNLDINELLVVEYYSR 193 >gi|149777722|gb|ABR28491.1| ribosomal protein small subunit 4-like protein [Asplenium hookerianum] gi|149777724|gb|ABR28492.1| ribosomal protein small subunit 4-like protein [Asplenium hookerianum] gi|149777726|gb|ABR28493.1| ribosomal protein small subunit 4-like protein [Asplenium hookerianum] gi|149777730|gb|ABR28495.1| ribosomal protein small subunit 4-like protein [Asplenium bulbiferum] gi|165935731|gb|ABY75162.1| ribosomal protein S4 [Asplenium hookerianum] Length = 188 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKYL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ RI + + LVVE+YSR Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|157689494|gb|ABV65303.1| ribosomal protein S4 [Hymenanthera alpina] Length = 169 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 12/171 (7%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQ+++ +YG I+E++ + + A R++G T L LE RLD I++R Sbjct: 1 KKSQYRIRLEEKQRLRLHYG-ITERQLLTYVRIAARAKGSTGQVLRQLLEMRLDNILFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---- 159 TI ARQ VNHRH+LVNGR V+I +YRCK D+I VK K K A + + Sbjct: 60 GMASTIPRARQLVNHRHILVNGRIVDIPNYRCKPRDIITVKDKKKSRAMIQNYLKSLPRK 119 Query: 160 ----AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P+++++N +I S + LVVE+YSR Sbjct: 120 GLPNPRKGLPKHLTLNSVEYKGFVNQIIDSQ---WADFKINELLVVEYYSR 167 >gi|156619648|gb|ABU88438.1| small ribosomal protein 4 [Aneura sp. Shaw s.n.] gi|156619670|gb|ABU88449.1| small ribosomal protein 4 [Aneura pinguis] gi|156619672|gb|ABU88450.1| small ribosomal protein 4 [Aneura pinguis] Length = 175 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 9 STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157 ++R VPTI AARQ VNHRHV +N ++I SY CK GDVI + + K + + Sbjct: 68 TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNWRDMN 127 Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + ++P +++ + + + +I + + LVVE+YSR Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 173 >gi|99640035|emb|CAJ45144.1| putative ribosomal protein S4 gene [Metaxya lanosa] Length = 197 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 14/204 (6%) Query: 8 KHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + K+ RR+ K +P TR Q K S F ++L AKQ+++ YG + Sbjct: 1 RLKLIRRLKNLPGLTGKVSNPGETRVAVD----QSASKKISQFCVRLEAKQRLRFNYG-L 55 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E+ R + A +++G T L+ LE R D IV+ + TI AARQ VNHRH++VN Sbjct: 56 TERLLR-YVRIARKTKGSTGQVLLQLLEMRSDNIVFHSGMASTIPAARQLVNHRHIVVND 114 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS---VNHDNMVATFVRI 182 R V++ S+RCK D+I V+ + +P++++ + D RI Sbjct: 115 RIVDVPSHRCKPKDIITVRNRPSNKMKSGINDSSRGDKIPDHLTLSLLEGDWQKGLVNRI 174 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 175 ---ANRESIDLDINELLVVEYHSR 195 >gi|311901164|gb|ADQ13132.1| small ribosomal protein 4 [Nephrolepis abrupta] gi|311901166|gb|ADQ13133.1| small ribosomal protein 4 [Nephrolepis abrupta] Length = 178 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ L Sbjct: 70 VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYSA-LRVKS 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 129 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|118724455|gb|ABL10801.1| ribosomal protein small subunit 4 [Cheilanthes arizonica] Length = 188 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVNGR V+I SYRCK D++ ++ + + Sbjct: 80 VIFQLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPKDILTIRNRLTSYNAAKVK-S 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++P++++++ + + + LVVE++SR Sbjct: 139 LGRDEIPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|149777728|gb|ABR28494.1| ribosomal protein small subunit 4-like protein [Asplenium richardii] Length = 188 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSXSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKYL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ RI + + LVVE+YSR Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186 >gi|17154631|emb|CAC83929.1| ribosomal protein S4 [Kabuyea hostifolia] Length = 174 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPGLTSKRP----RSGNDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 K D+I K K + A + + ++P++++++ +I S + Sbjct: 116 KPRDIITTKDKERSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172 Query: 195 MQ 196 + Sbjct: 173 IN 174 >gi|78102685|gb|ABB21556.1| small ribosomal protein 4 [Plagiochila lunata] Length = 164 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 5/168 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN 174 V+I SY C+ GD+I ++ K K + + + ++ +P +++ + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNIHSFQKLKIPSHLTFDSTQ 164 >gi|118724513|gb|ABL10830.1| ribosomal protein small subunit 4 [Cryptogramma acrostichoides] Length = 188 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI AARQ VNHRH+LVN R V+I SYRCK D++ ++ + + Sbjct: 80 IIFQLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDILTIRNRPTSRNAAK-FES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++P+++ ++ ++ + + LVVE+YSR Sbjct: 139 LGGNEIPDHLILSLPKTGEPAGLVNQM---ANRESVDLNINELLVVEYYSR 186 >gi|290467475|gb|ADD25855.1| small ribosomal protein 4 [Hymenophyllum multifidum] Length = 187 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 18 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E Sbjct: 77 IVFQSGMSATIPAARQLVNHRHILVNNNIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 136 Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + + LVVE+YSR Sbjct: 137 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 185 >gi|51458075|gb|AAU03391.1| ribosomal protein small subunit 4 [Hymenasplenium cheilosorum] Length = 189 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 22 QSNLRKISQFCIRLEAKQRLRLNYG-LTERQLLRYVRIARKTRGSTGQVLLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN V+I SYR K D+I + + + L+ Sbjct: 81 VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRRKPKDIITARNRPTSWNA-LKGES 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + P++++V D + + + VVE+YSR Sbjct: 140 IGGDETPDHLTVSLSEGDRPTGLVNHV---ANRESVNLNINELSVVEYYSR 187 >gi|118724317|gb|ABL10732.1| ribosomal protein small subunit 4 [Pellaea atropurpurea] Length = 195 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKANASNLGEFRVAVDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 NYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNHRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYRCK D+I ++ + + L+ +VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRPTSYNA-LKVESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|99639949|emb|CAJ45126.1| putative ribosomal protein S4 gene [Cibotium barometz] Length = 187 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 14/193 (7%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P TR Q K S F ++L AKQ+++ YG ++E+ R + A Sbjct: 2 LTGKASNPGETRVAAD----QSTSRKISQFCVRLEAKQRLRFNYG-LTERLLR-YVRIAR 55 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T + LE RLD I++ + TI AARQ VNHRH++VN R V++ SYRCK Sbjct: 56 KTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRIVDVPSYRCKPK 115 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + + R ++P++++ + + RI + Sbjct: 116 DIITVRNRPTSSNVLRSGINESSRGDEIPDHLTLSLLEGNRPKGLVNRI---ANRESIDL 172 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 173 NINELLVVEYYSR 185 >gi|32879549|emb|CAE11885.1| ribosomal protein S4 [Cyanixia socotrana] Length = 174 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 K P + G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 ALPGLTSKRPGS----GSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVHI 55 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 56 AGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCK 115 Query: 137 EGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 D+I K K + A + + ++P +++++ +I S + Sbjct: 116 PRDIITTKNKQRSKALIQNFISSSPHLEELPNHLTIDPFQYKGLVNQIIDSK---WIGLK 172 Query: 195 MQ 196 + Sbjct: 173 IN 174 >gi|290467491|gb|ADD25863.1| small ribosomal protein 4 [Hymenophyllum tunbrigense] gi|290467493|gb|ADD25864.1| small ribosomal protein 4 [Hymenophyllum tunbrigense] Length = 187 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 G +N R Q K S F ++L AKQ+++ YG +E++ + A ++ Sbjct: 1 GLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKA 58 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD IV+++ TI AARQ VNHRH+ VN V+I SYRCK D+ Sbjct: 59 KGSTGQILLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPSYRCKPKDL 118 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQ 196 I V+ + + E + R +P++++ + I + + Sbjct: 119 ITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNIN 175 Query: 197 PNLVVEFYSR 206 LVVE+YSR Sbjct: 176 ELLVVEYYSR 185 >gi|59803301|gb|AAX07759.1| Rps4 [Jubula hutchinsiae subsp. javanica] Length = 172 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 5/171 (2%) Query: 6 SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65 + KI RR+G ++ +Y + K S + ++L KQK++ +YG + Sbjct: 6 GPRVKIIRRLGSXPGLTGRASKPKSTY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-L 61 Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 +E++ + A +++G T L+ LE RLD ++ PTI +ARQ VNHRH+ +N Sbjct: 62 TERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINN 121 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 +VN+ SY C+ GD+I +K K K + ++ ++P ++ N + Sbjct: 122 YTVNVPSYNCEPGDIITIKNKXKSQLIXTKNINSXQKLEIPNHLIFNSIKL 172 >gi|305672379|gb|ADM63613.1| ribosomal protein S4 [Campanula trachelium] Length = 171 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 9/177 (5%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G +SP + R K S + +L KQK++ +YG ++E++ Sbjct: 1 KKIRRLGTLPGLTTRSPDDLRKE-------SSSGKKSLYCSRLEEKQKLRFHYG-LTERQ 52 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A R++G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+ Sbjct: 53 LLKYVRLAARAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRLVD 112 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185 I SYRCK D I K K A + + L ++ +P ++++ +I S Sbjct: 113 IPSYRCKPRDTITAKDKQTSKALIQNSLDSLPQKKLPPHLTLKRRQYKGLVNKIIDS 169 >gi|86211249|gb|ABC87297.1| small ribosomal protein 4 [Hymenophyllum dimidiatum] Length = 182 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 13 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E Sbjct: 72 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 131 Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + LVVE+YSR Sbjct: 132 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFNINELLVVEYYSR 180 >gi|156619662|gb|ABU88445.1| small ribosomal protein 4 [Aneura sp. Wickett 468] Length = 175 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 9 STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157 ++R VPTI AARQ VNHRHV +N ++I SY CK GDVI + + K + + Sbjct: 68 TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNWRDMN 127 Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + ++P +++ + + +I + + LVVE+YSR Sbjct: 128 SLQKPEIPNHLTFDSKEFFGSVQQIIDRD---WIYLKINELLVVEYYSR 173 >gi|118724339|gb|ABL10743.1| ribosomal protein small subunit 4 [Pellaea falcata] Length = 184 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 17 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVLLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D++ ++ + +V Sbjct: 76 VIFKLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDILTIRNRPTSYNAVKV-ES 134 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE+YSR Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYYSR 182 >gi|118724497|gb|ABL10822.1| ribosomal protein small subunit 4 [Mildella intramarginalis] Length = 195 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q +K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEIRVVGDQPASNKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD ++++ TI AARQ VNHRH+LVNGR V+I Sbjct: 60 NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNGRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|18028024|gb|AAL55936.1| ribosomal protein S4 [Eriosorus hirsutulus] Length = 178 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 11 QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRC D+I + + ++ + Sbjct: 70 ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 128 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ R+ + + VVEFYSR Sbjct: 129 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 176 >gi|51458166|gb|AAU03431.1| ribosomal protein small subunit 4 [Asplenium lucidum] Length = 193 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 26 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 84 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ + S Sbjct: 85 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRKKSL 144 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ I + + LVVE+YSR Sbjct: 145 VGDKT-PNHLTFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 191 >gi|156619660|gb|ABU88444.1| small ribosomal protein 4 [Aneura sp. Shaw 670] Length = 175 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD Sbjct: 9 STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157 ++R VPTI AARQ VNHRHV +N ++I SY CK GDVI + + K + + Sbjct: 68 TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLENWRDMN 127 Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + ++P +++ + + + +I + + LVVE+YSR Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 173 >gi|311901168|gb|ADQ13134.1| small ribosomal protein 4 [Nephrolepis acutifolia] gi|311901180|gb|ADQ13140.1| small ribosomal protein 4 [Nephrolepis brownii] gi|311901188|gb|ADQ13144.1| small ribosomal protein 4 [Nephrolepis davallioides] gi|311901192|gb|ADQ13146.1| small ribosomal protein 4 [Nephrolepis falcata] Length = 178 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 70 VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 129 PRKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|32401902|gb|AAP80939.1| small ribosomal protein 4 [Hesperocyparis macrocarpa] Length = 190 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 10/193 (5%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N R P + K S + ++L+ KQ+++ +YG + E++ + A Sbjct: 1 LPGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 59 RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPV 193 D+I +K+K V + ++ ++D VP +++ +I + + + Sbjct: 119 DLISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 KINELLVVEYYSR 188 >gi|311901204|gb|ADQ13152.1| small ribosomal protein 4 [Nephrolepis radicans] Length = 178 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 70 VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 129 PRKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|290467471|gb|ADD25853.1| small ribosomal protein 4 [Hymenophyllum feejeense] Length = 179 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 10 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E Sbjct: 69 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 128 Query: 159 LAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + + LVVE+YSR Sbjct: 129 FSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 177 >gi|51458170|gb|AAU03433.1| ribosomal protein small subunit 4 [Asplenium richardii] Length = 189 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 22 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI ARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ Sbjct: 81 VLFHLGMASTIPXARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKYL 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ RI + + LVVE+YSR Sbjct: 141 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 187 >gi|311901198|gb|ADQ13149.1| small ribosomal protein 4 [Nephrolepis lauterbachii] Length = 178 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QLASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 70 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 129 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|311901196|gb|ADQ13148.1| small ribosomal protein 4 [Nephrolepis hirsutula] Length = 178 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + L A Sbjct: 70 VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++++ + I + + LVVE+YSR Sbjct: 129 PRKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|118724417|gb|ABL10782.1| ribosomal protein small subunit 4 [Pellaea pectiniformis] Length = 192 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 25 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 84 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSCNAAK-GKS 142 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE+YSR Sbjct: 143 LGRNEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYYSR 190 >gi|156619664|gb|ABU88446.1| small ribosomal protein 4 [Aneura sp. Wickett 472] gi|156619666|gb|ABU88447.1| small ribosomal protein 4 [Aneura sp. Wickett 473] Length = 172 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 6/163 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ A ++G T L+ LE RLD ++R Sbjct: 14 KISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDNTIFRL 72 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 VPTI AARQ VNHRHV +N ++I SY CK GDVI + + K + + Q + Sbjct: 73 GIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNMNSLQ--KPA 130 Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++ + V + +I + + LVVE+YSR Sbjct: 131 IPNHLTFDSKEFVGSVQQIIDRD---WIYLKINELLVVEYYSR 170 >gi|170516215|gb|ACB15109.1| small ribosomal protein 4 [Callitris preissii] Length = 195 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ K+P R+ P L + KPS + +L+ KQK++ +YG +SE Sbjct: 1 RLKIINRLKTLPGLSKKTP--KRNEQPFLKKHFKPLKPSKYLERLKEKQKLRFHYG-LSE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 58 RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV--ATFVRIPSS 185 V+I SYRCK D I +K KQ + + + VP ++ + +I + Sbjct: 118 VDIPSYRCKPQDFISIKD--KQGLRINKNIKEKITRVPPHLKRIKKKLQYXGLVQKIIDN 175 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + M LVV +YSR Sbjct: 176 Q---SIGLKMNELLVVGYYSR 193 >gi|227439429|gb|ACP31391.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] Length = 190 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ Y ++E++ + A ++RG T L LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNY-RLTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 82 VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L E+ +P++++++ RI + + LVVE+YSR Sbjct: 142 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 188 >gi|78102637|gb|ABB21532.1| small ribosomal protein 4 [Plagiochila crozetensis] Length = 165 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIPRLGVLPGFTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 V+I SY C+ GD+I ++ K K + + + ++ +P +++ + + Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQL 165 >gi|18028018|gb|AAL55933.1| ribosomal protein S4 [Jamesonia verticalis] Length = 191 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I ++ + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITIRNRP-IFHNMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + VVEFYSR Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 189 >gi|212004225|gb|ACJ15421.1| Rps4 [Argyrochosma incana] Length = 187 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V + Sbjct: 79 IIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVK-SES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE++SR Sbjct: 138 LGRDEVPDHLTLSISKTSEPTGLVNNM---ANRESVNLDINELLVVEYHSR 185 >gi|307602401|gb|ADN68082.1| ribosomal protein S4 [Thuja standishii] Length = 189 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQK++ +YG + E++ + A R Sbjct: 1 PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQKLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++E+D VP +++ A +I + + + Sbjct: 119 LISIKEKQGLINKINQNIFISEQDQMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|78102621|gb|ABB21524.1| small ribosomal protein 4 [Acrochila biserialis] Length = 174 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 8/181 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 K+ + SY + K S + ++L KQK + +YG ++E++ + A Sbjct: 1 PGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKXRFHYG-LTERQLLKYMRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L LE RLD ++R PTI ARQ VNHRH+ +N V+I SY C+ G Sbjct: 57 KAKGSTGQVLXQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNNIVDIPSYNCEPG 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 ++I +K K K + + + + +P +++ + + + ++ + + + Sbjct: 117 NIITIKNKQKSQSIITKNINSFQNLKIPSHLTFDSIQLRGSVNQMINR---EWINLKINE 173 Query: 198 N 198 Sbjct: 174 L 174 >gi|118724499|gb|ABL10823.1| ribosomal protein small subunit 4 [Aleuritopteris farinosa] Length = 194 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 8/197 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K+ V+ + Q K S F ++L AKQ+++ YG ++E++ + Sbjct: 1 RRLKNLPGLAGKNNVSNLEEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLN 59 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R+RG T L+ LE RLD ++++ TI AARQ V+HRH+LVN V+I S Sbjct: 60 YVRIARRTRGSTGQVLLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRHIVDIPS 119 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM---VATFVRIPSSLKDV 189 YRCK D+I ++ + + L +VP++++++ + Sbjct: 120 YRCKPKDIITIRNRPTSYNAAK-GKSLGRDEVPDHLTLSISKTNESTGLVNHM---ANRE 175 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 SVNLDINELLVVEYHSR 192 >gi|86438906|emb|CAJ55426.1| small ribosomal protein 4 [Plagiochila obovata] Length = 163 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 5/161 (3%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ FLE RLD Sbjct: 7 STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQFLEMRLDN 65 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R PTI ARQ VNHRH+ +N V+I SY C+ GD+I ++ K K +++++ Sbjct: 66 TIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIRDKQKSQSAIIKNIN 125 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 ++ +P +++ + + + ++ + + + Sbjct: 126 SFQKVKIPSHLTFDSTQLRGSVNQMINR---EWINLKINEL 163 >gi|78102687|gb|ABB21557.1| small ribosomal protein 4 [Plagiochila lyallii] Length = 165 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDM 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175 V+I SY C+ GD+I ++ K K + V + ++ +P +++ + + Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNMNSFQKLKIPSHLTFDSTQL 165 >gi|190361243|gb|ACE76926.1| ribosomal protein small subunit 4 [Trichomanes elegans] Length = 153 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 18/166 (10%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S FG++L AKQ+++ YG +E++ + A +++G T L+ LE RLD IV+R Sbjct: 1 KVSQFGVRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 PTI AARQ VNHRHVLVN V+I SYRCK D+I ++ + + + Sbjct: 60 GMAPTIPAARQLVNHRHVLVNNHMVDIPSYRCKHKDLITLR-----------SQESFRKR 108 Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++ + + I + + + LVVE+YSR Sbjct: 109 IPDHLTFSSSEGNSLKGLVNGIANRD---SIDLNINELLVVEYYSR 151 >gi|118724465|gb|ABL10806.1| ribosomal protein small subunit 4 [Cheilanthes eatonii] Length = 194 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 25 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EAS 157 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ ++ +V + Sbjct: 84 VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVKVKGE 143 Query: 158 QLAERDVPEYISVNHDNM---VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ M + + + LVVE++SR Sbjct: 144 SFGRDEVPDHLTLSISKMSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 192 >gi|311901162|gb|ADQ13131.1| small ribosomal protein 4 [Lomariopsis pollicina] Length = 178 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ S Sbjct: 70 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSYNALRVKSP 129 Query: 159 LAERDVPEYIS--VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P++++ ++ DN A V + + LVVE+YSR Sbjct: 130 AGDKT-PDHLTISLSEDNKPAGLVNCI--ANRESVNLNINELLVVEYYSR 176 >gi|108773080|ref|YP_635989.1| ribosomal protein S4 [Scenedesmus obliquus] gi|122179524|sp|Q1KVT5|RR4_SCEOB RecName: Full=30S ribosomal protein S4, chloroplastic gi|88696646|gb|ABD48272.1| ribosomal protein S4 [Scenedesmus obliquus] Length = 251 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 18/184 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRKS------- 43 MS+ + +I RRIG+ K P + PG HG + Sbjct: 1 MSRYIGPRLRIIRRIGKLRGFTRKKPFRRSFRGRGALQGKVIPPGQHGLTKLFKSRPFDS 60 Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 S + ++L+ KQ+++ YG I+EK+ ++A + + T L+ LE RLD IV+R Sbjct: 61 NESDYLIRLKVKQRLRYNYG-ITEKQLVKYVRQAKKMKESTGQVLLQLLEMRLDNIVFRL 119 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 PTI AARQ ++H H+ VN + VNI SY CK DVI V K L V Q + Sbjct: 120 NMAPTICAARQLISHGHIHVNSKKVNIASYMCKPKDVISVSMKQSSLKLVNRNLQEYSQK 179 Query: 164 VPEY 167 + Y Sbjct: 180 MSAY 183 Score = 34.9 bits (79), Expect = 7.1, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%) Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + LE L ++++ P + A +++N V VN R V + Sbjct: 167 KLVNRNLQEYSQKMSAYKKRLERTLAYVLFQRNISPNMANALEYINQGKVQVNNRKVLLP 226 Query: 132 SYRCKEGDVIEVKQKS 147 +Y C D+I VK Sbjct: 227 NYLCHSKDMISVKTDK 242 >gi|311901194|gb|ADQ13147.1| small ribosomal protein 4 [Nephrolepis falciformis] Length = 178 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 11 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +V+ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S Sbjct: 70 VVFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNALRTKSP 129 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ + I + + LVVE+YSR Sbjct: 130 RKDKT-PDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176 >gi|42556422|gb|AAS19806.1| small ribosomal protein 4 [Herbertus dicranus] Length = 137 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 5/137 (3%) Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD ++R TI ARQ VNHRH+ +N V+I Sbjct: 2 KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 61 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMVATFVRIPSSLKDV 189 SY C+ GD+I +K K K + + + L + + +P +++ + + + + + Sbjct: 62 SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKKIPSHLTFDSIKLHGSINQTINR---E 118 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 119 SINLKINELLVVEYYSR 135 >gi|16930539|gb|AAL31952.1| ribosomal protein small subunit 4 [Athyrium filix-femina] Length = 162 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 8/164 (4%) Query: 46 SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105 S F ++L AKQ+++ YG ++E++ + A +RG T + LE RLD +++ Sbjct: 2 SQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARGTRGSTGQVPLQLLEMRLDNVIFNLGM 60 Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP 165 TI AARQ VNHRH+LVN R V+I SYRCK D+I V+ + + L+ A +P Sbjct: 61 ASTIPAARQLVNHRHILVNNRIVDIPSYRCKPKDIITVRNRPTSCNA-LKGESPAGDKIP 119 Query: 166 EYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++++ + R+ + + LVVE+YSR Sbjct: 120 DHLTASLSEGNRPTGLVNRV---ANRESVNLNINELLVVEYYSR 160 >gi|219973344|gb|ACL68558.1| ribosomal protein small subunit 4 [Marsilea macropoda] Length = 169 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 9/168 (5%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + +L AKQ+++ YG ++E++ + A +++G T L+ LE RLD IV++ Sbjct: 4 KISQYCGRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQL 62 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI AARQ VNH H+LVN R V++ SYRC+ D+I V+ + + + R Sbjct: 63 GLAPTIPAARQLVNHXHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRS 122 Query: 163 -DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P+++S + + ++ K + + L+VE+YSR Sbjct: 123 NEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 167 >gi|118724425|gb|ABL10786.1| ribosomal protein small subunit 4 [Argyrochosma nivea] Length = 195 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLKEFRVAGDQSVSKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V + L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKD-ESLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|208751323|gb|ACI31274.1| ribosomal protein S4 [Volvox carteri] gi|261888171|gb|ACY06026.1| ribosomal protein S4 [Volvox carteri f. nagariensis] Length = 260 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 18/175 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRK-------S 43 MS+ + ++ RRIG+ K P + PG HG + S Sbjct: 1 MSRYLGPRLRVIRRIGKLRGFTRKKPFRRVFRGFGRSKGKVIPPGQHGLTKLLKTRPYDS 60 Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 S + ++L+ KQ+++ YG I+E++ + ++A + + T L+ FLE RLD IV+R Sbjct: 61 SESDYLIRLKVKQRLRFNYG-ITERQLVNYVRKAKKIKESTGQVLLQFLEMRLDNIVFRL 119 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 PTI AARQ ++H H+ VN + VNI SY CK DVI V K L V + + Sbjct: 120 NMAPTIPAARQLISHGHIRVNNKKVNIPSYMCKPKDVISVAMKQSSLKLVNKNLE 174 >gi|118724411|gb|ABL10779.1| ribosomal protein small subunit 4 [Pellaea dura] Length = 181 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 14 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 73 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 131 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE+YSR Sbjct: 132 LGRNEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYYSR 179 >gi|37548871|gb|AAO32704.1| ribosomal protein 4 [Pogonatum subulatum] Length = 137 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 4/138 (2%) Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + A +++G T L+ LE RLD I++R PTI ARQ VNH+H+LVN VN Sbjct: 1 LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 60 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188 I SYRCK D I +K + + A + + ++ +P +++ N +I L Sbjct: 61 IPSYRCKPQDFITIKNRQESQAIITKNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDR 117 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 118 ESIGLKINELLVVEYYSR 135 >gi|51458153|gb|AAU03425.1| ribosomal protein small subunit 4 [Asplenium laciniatum] Length = 189 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A +RG T + LE RLD Sbjct: 22 QSTSRKISQFCVRLZAKQRLRFNYG-LTERQLLRYVRIARITRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ PTI AARQ VNHRH+LVN V+I SYR K D I V+ + + L Sbjct: 81 VLFHLGIAPTIPAARQLVNHRHILVNNFIVDIPSYRRKPKDSITVRNRPTSCNA-LGNKS 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++V D R+ + + LVVE+YSR Sbjct: 140 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187 >gi|290467483|gb|ADD25859.1| small ribosomal protein 4 [Hymenophyllum revolutum] Length = 187 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 18 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E Sbjct: 77 IVFQSGISATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 136 Query: 159 LAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + + LVVE+YSR Sbjct: 137 FSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 185 >gi|281332611|gb|ADA60892.1| ribosomal protein S4 [Neocheiropteris ensata] Length = 188 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 21 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN V+I SYRCK D+I V+ + + Sbjct: 80 VIFHLGLASTVPAARQLVNHRHILVNSCVVDIPSYRCKPKDIITVRNRPTSYNASRNKFT 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ D I + + LVVE+YSR Sbjct: 140 GGDKT-PDHLAISLSEDDKPTGLVNCI---ANRESVNLNINELLVVEYYSR 186 >gi|78102659|gb|ABB21543.1| small ribosomal protein 4 [Plagiochila flabelliflora] Length = 162 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE R D ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRXARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 V+I SY C+ GD+I + K K + V + ++ +P +++ + Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDS 162 >gi|125662704|gb|ABN50302.1| small ribosomal protein 4 [Glyptostrobus pensilis] Length = 197 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I R+ K+P R+ P + KPS + ++L+ KQ+++ +YG ++E++ Sbjct: 1 IINRLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I Sbjct: 58 LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSS 185 SYRCK D I +K K + + + ++D VP +++ +I + Sbjct: 118 PSYRCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDN 177 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 NR---IGLKINELLVVEYYSR 195 >gi|165968075|gb|ABY75863.1| ribosomal protein small subunit 4 [Asplenium shuttleworthianum] Length = 188 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P++++ I + + LVVE+YSR Sbjct: 140 VGDKT-PDHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 186 >gi|118724329|gb|ABL10738.1| ribosomal protein small subunit 4 [Pellaea bridgesii] gi|118724331|gb|ABL10739.1| ribosomal protein small subunit 4 [Pellaea bridgesii] gi|118724333|gb|ABL10740.1| ribosomal protein small subunit 4 [Pellaea bridgesii] gi|118724335|gb|ABL10741.1| ribosomal protein small subunit 4 [Pellaea bridgesii] gi|118724391|gb|ABL10769.1| ribosomal protein small subunit 4 [Pellaea x glaciogena] Length = 195 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLKEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNHRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724467|gb|ABL10807.1| ribosomal protein small subunit 4 [Cheilanthes eatonii] Length = 195 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 RLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKY 59 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I SY Sbjct: 60 VRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSY 119 Query: 134 RCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNM---VATFVRIPSSLKDV 189 RCK D+I ++ ++ +V + +VP++++++ M + Sbjct: 120 RCKPKDIITIRNRTTSYNAVKVKGESFGRDEVPDHLTLSISKMSEPTGLVNHM---ANRE 176 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 177 SVNLDINELLVVEYHSR 193 >gi|125662678|gb|ABN50289.1| small ribosomal protein 4 [Platycladus orientalis] Length = 196 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R+ K+P R P + KPS + ++L+ KQ+++ +YG + E++ Sbjct: 1 ISRLKTLPGLSKKTP--NRIKKPIKKKHFKPIKPSKYPVRLKEKQRLRFHYG-LPERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 58 QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSL 186 SYRCK D+I +K+K + + + ++D VP +++ +I + Sbjct: 118 SYRCKPQDLISIKEKEGSKNRIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNK 177 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 R---IGLKINELLVVEYYSR 194 >gi|156619317|gb|ABU88338.1| ribosomal protein S4 [Chlamydomonas moewusii] Length = 269 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 18/174 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSY----------GPGLHGQRRKSKPS---- 46 M++ + +I RRIG+ K P+ + PG HG + K Sbjct: 15 MARYTGPRLRIIRRIGKLRGFTRKKPIRRKCTNKGYLNGRVIPPGQHGLVKLMKTRPYDS 74 Query: 47 ---YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + ++L+ KQ+++ YG +SE++ + ++A + + T L+ LE R D IV+R Sbjct: 75 SQSDYLIRLKVKQRLRFNYG-LSERQLVNYIRKAKKIKEATGQVLLQLLEMRFDNIVFRL 133 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 PTI AARQ + H H+ VN + VNI SY CK DVI V K L V + Sbjct: 134 NMAPTIGAARQLITHGHIRVNNKKVNIPSYMCKPKDVISVAMKKTSLKLVNKNL 187 >gi|307602219|gb|ADN67991.1| ribosomal protein S4 [Calocedrus decurrens] gi|307602221|gb|ADN67992.1| ribosomal protein S4 [Calocedrus macrolepis] Length = 189 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGVVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|32401866|gb|AAP80921.1| small ribosomal protein 4 [Cephalotaxus drupacea] Length = 191 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 9/193 (4%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N + + S + ++L+ KQ+++ YG ++E++ + A Sbjct: 1 LPGLSKKKPNRKWGATCQKKHYKPINSSKYPVRLKEKQRVRFNYG-LTERQLLQYVRIAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G TS L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 60 RAKGSTSQVLLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 119 Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193 D+I +K + + + + L++++ VP ++++ V +I + + + Sbjct: 120 DLISIKDQQRSRNIINKNINLSQKNKMRVPFHLNLLKKKSQYVGLVKKIIDNKR---ISL 176 Query: 194 IMQPNLVVEFYSR 206 + LVVE++SR Sbjct: 177 KINELLVVEYFSR 189 >gi|212004155|gb|ACJ15386.1| Rps4 [Pellaea atropurpurea] Length = 187 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A ++RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ + + L+ Sbjct: 79 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|42794656|gb|AAS45725.1| Rps4 [Disterigma trimerum] Length = 211 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 11/168 (6%) Query: 46 SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105 S + ++L+ KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 44 SQYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM 102 Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD 163 TI ARQ V HRHVLVNGR ++I SYRCK D+I ++KS+ S L R Sbjct: 103 ASTIPGARQLVXHRHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRK 162 Query: 164 -----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP ++++N +I ++ + ++ LVVE+YSR Sbjct: 163 QKRKRVPYHLTLNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|18027996|gb|AAL55922.1| ribosomal protein S4 [Eriosorus hirtus] Length = 189 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 22 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+ VN V+I SYRC D+I + + ++ + Sbjct: 81 ILFRLGMASTIPAARQLVNHRHIXVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 139 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + S + + V EFYSR Sbjct: 140 IGRDGIPDHLTLSVSKDGEPSGLVNSMVSR---ESVDLEINELFVAEFYSR 187 >gi|118724367|gb|ABL10757.1| ribosomal protein small subunit 4 [Pellaea notabilis] Length = 195 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAVDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 NYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYRCK D+I ++ + + L+ +VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRPTSY-NALKVESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724343|gb|ABL10745.1| ribosomal protein small subunit 4 [Pellaea glabella subsp. occidentalis] gi|118724345|gb|ABL10746.1| ribosomal protein small subunit 4 [Pellaea glabella subsp. simplex] Length = 187 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A ++RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|18027938|gb|AAL55893.1| ribosomal protein S4 [Pteris quadriaurita] Length = 191 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRCK D+I ++ + + Sbjct: 83 IIFRLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDIITIRNRPTSHNAAK-GES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++++ + + + +VVE+YSR Sbjct: 142 PGGGGIPDHLTLSLSKNGEPAGLVNHM---ANRESXDLDINEXVVVEYYSR 189 >gi|305672327|gb|ADM63587.1| ribosomal protein S4 [Acanthocalyx albus] Length = 163 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 6/167 (3%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K P++ GL Q R K S + ++L KQK++ +YG ++E++ + A + Sbjct: 1 GLTNKRPIDR----SGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 +G T L+ LE RLD I++R PTI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 56 VKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPRD 115 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 +I + + A + + + R ++P+++++ + +I S Sbjct: 116 IITARDEQNSRALIQNSLDSSPREELPKHLTLQSFQYKGSVNQIIDS 162 >gi|190361225|gb|ACE76917.1| ribosomal protein small subunit 4 [Trichomanes alatum] Length = 166 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S FG++L AKQ+++ YG E++ + A +++G T L+ LE RLD IV+R Sbjct: 13 RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 71 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRHVLVN V+I SYRCK+ D+I ++ + + + Sbjct: 72 LGMAPTIPAARQLVNHRHVLVNDHIVDIPSYRCKDKDLITLR-----------NQESSRK 120 Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++ + +N+ I + + LVVE+YSR Sbjct: 121 RIPDHLKFSSSEGNNLKGLVNGI---ANRESIDLNINELLVVEYYSR 164 >gi|118724421|gb|ABL10784.1| ribosomal protein small subunit 4 [Argyrochosma jonesii] Length = 195 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVK-GESLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724461|gb|ABL10804.1| ribosomal protein small subunit 4 [Cheilanthes covillei] gi|118724473|gb|ABL10810.1| ribosomal protein small subunit 4 [Cheilanthes gracillima] Length = 195 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYRCK D+I ++ ++ +V +VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|307602393|gb|ADN68078.1| ribosomal protein S4 [Tetraclinis articulata] Length = 189 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKEGLRNIIKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|20531055|gb|AAM27350.1| ribosomal protein 4 [Tetrodontium brownianum] Length = 176 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ +YG I+E++ + A R++G T L+ LE RLD +++ Sbjct: 13 NKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIF 71 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R TI ARQ VNHRH+LVN VNI SYRCK D I +K + K + + ++ Sbjct: 72 RLGMALTIPGARQLVNHRHILVNNHIVNIPSYRCKPQDFITIKDRQKSQNIIAKNIDFSQ 131 Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + VP +++ N F ++ + + LV E Y R Sbjct: 132 KFKVPNHLTFNFSQKKGLFNQVLGRG---SIGLKINELLVGENYXR 174 >gi|307602223|gb|ADN67993.1| ribosomal protein S4 [Chamaecyparis formosensis] gi|307602229|gb|ADN67996.1| ribosomal protein S4 [Chamaecyparis pisifera] Length = 189 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 FISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|190361263|gb|ACE76936.1| ribosomal protein small subunit 4 [Vandenboschia speciosa] Length = 182 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 59/174 (33%), Positives = 89/174 (51%), Gaps = 10/174 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG +E++ + A R++G T L+ LE RLD Sbjct: 11 QSASRKVSQFCVRLEAKQKLRFNYGS-TERQLLKYVRIARRAKGSTGEVLLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--- 155 IV++ PTI AARQ VNHRH+LVN ++I SYRCK D+I +K S + Sbjct: 70 IVFQLSMAPTIPAARQLVNHRHILVNNCIIDIPSYRCKPKDIISLKSGSSPSYRSQQQDT 129 Query: 156 ASQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 E+ +P++++ ++ I + + LVVE+YSR Sbjct: 130 NHFFQEKRIPDHLTFSFSENNRPKGLVNGI---ANRESIDLDINELLVVEYYSR 180 >gi|37722549|gb|AAN75496.1| ribosomal protein S4 [Anogramma chaerophylla] gi|38112448|gb|AAR11304.1| ribosomal protein S4 [Anogramma chaerophylla] Length = 191 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 2/189 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 K+ ++ K S F ++L AKQ+++ YG ++E++ + A Sbjct: 3 LPGLAGKNKMSNSEEFRVASDPSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIA 61 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 ++RG T + LE RLD I++R TI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 62 RKTRGSTGQVPLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNRRIVDIPSYRCKP 121 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++ + +V + + +P++++++ + I + + Sbjct: 122 KDLITIRNRPTSH-NVAKGESIGRNGMPDHLTLSLSKAGESAGLINHMANRESVDLDINE 180 Query: 198 NLVVEFYSR 206 VVE+YSR Sbjct: 181 LFVVEYYSR 189 >gi|51458174|gb|AAU03435.1| ribosomal protein small subunit 4 [Asplenium obliquum] Length = 190 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 23 QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ + S Sbjct: 82 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRKKSL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ I + + LVVE+YSR Sbjct: 142 VGDKT-PNHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 188 >gi|254994789|ref|ZP_05276979.1| 30S ribosomal protein S4 [Anaplasma marginale str. Mississippi] Length = 165 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 71/143 (49%), Positives = 92/143 (64%), Gaps = 1/143 (0%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K++ RR+G NLWGR K PV TR+Y PG HG K S FG Q A QK K YY +S Sbjct: 7 KYRASRRLGVNLWGRSKDPVATRNYPPGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 65 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 K+ R+ F A +GDT NL+ LESRL +VY A FVPT+F+ARQ V+H+HV VNG+ Sbjct: 66 KQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 125 Query: 128 VNIGSYRCKEGDVIEVKQKSKQL 150 VNI S+ K GDV++++ + Sbjct: 126 VNIPSFSVKPGDVVQIRDGQQSF 148 >gi|307602227|gb|ADN67995.1| ribosomal protein S4 [Chamaecyparis obtusa] Length = 189 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|307602225|gb|ADN67994.1| ribosomal protein S4 [Chamaecyparis lawsoniana] Length = 189 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKAQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|311901160|gb|ADQ13130.1| small ribosomal protein 4 [Cyclopeltis crenata] Length = 177 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 10 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVLLQLLEMRLDN 68 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ ++ ++VL Sbjct: 69 VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDIITVRNRTTS-SNVLRGKF 127 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P+++++ + I + + LVVE+YSR Sbjct: 128 LEGDKTPDHLTISLSEGNKPAGLIHCI---ANRESVNLNINELLVVEYYSR 175 >gi|307602231|gb|ADN67997.1| ribosomal protein S4 [Cupressus atlantica] gi|307602237|gb|ADN68000.1| ribosomal protein S4 [Cupressus duclouxiana] gi|307602245|gb|ADN68004.1| ribosomal protein S4 [Cupressus sempervirens] Length = 189 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K V + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|18027942|gb|AAL55895.1| ribosomal protein S4 [Coniogramme fraxinea] Length = 191 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 2/168 (1%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI AARQ VNHRH+LVN R V+I SYR K D++ ++ + + + Sbjct: 83 IIFQLGMASTIPAARQLVNHRHILVNHRVVDIPSYRRKPRDILTIRSRPTSRNAAK-SEY 141 Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +P+++ ++ + + + LVVE+YSR Sbjct: 142 LGGNKIPDHLILSLPKTGEPVGLVNHMANRESVDLNINELLVVEYYSR 189 >gi|308746029|ref|YP_003934560.1| ribosomal protein S4 [Cheilanthes lindheimeri] gi|302375462|gb|ADL29836.1| ribosomal protein S4 [Cheilanthes lindheimeri] Length = 195 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVSGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYRCK D+I ++ ++ +V +VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724507|gb|ABL10827.1| ribosomal protein small subunit 4 [Notholaena standleyi] Length = 195 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLTGKNNASNLEEVRVVGEQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV---ATFVRIPSSLKD 188 SYR K D+I ++ + + L ++P++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAAK-GKSLGRDEIPDHLTLSISKTSEPAGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|165968073|gb|ABY75862.1| ribosomal protein small subunit 4 [Asplenium oblongifolium] Length = 188 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ I + + LVVE+YSR Sbjct: 140 VGDKT-PNHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 186 >gi|52788783|gb|AAU87372.1| ribosomal protein small subunit 4 [Anemia mexicana] Length = 189 Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 10/195 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR ++L G +N + Q K S F ++L KQ+++ YG ++E Sbjct: 1 RLKMIRR-SKDLPGLTSKMLNPKKVRLD-TDQSSSKKISQFCIRLETKQRLRFNYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD I++++ TI AARQ VNHRH+LVN R Sbjct: 58 RQLLRYVRIARKAKGSTGQVLLQLLEMRLDNIIFQSGMASTIPAARQLVNHRHILVNNRV 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISV---NHDNMVATFVRIP 183 V+I SYRCK D+I + + + + VP ++++ N DN + Sbjct: 118 VDIPSYRCKPTDIITTENQPNSSGRFKRSIGSTGKGKVPSHLTLSVSNGDNPKGLVNGVV 177 Query: 184 SSLKDVPYPVIMQPN 198 + + + Sbjct: 178 NR---ESIDLNINEL 189 >gi|170516235|gb|ACB15119.1| small ribosomal protein 4 [Actinostrobus pyramidalis] Length = 194 Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 97/201 (48%), Gaps = 11/201 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ L G K N H + KPS + +L+ KQK++ +YG +SE Sbjct: 1 RLKIINRLKT-LPGLSKKTPNRNEQPLKKH--FKPLKPSKYPERLKEKQKLRFHYG-LSE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSS 185 V+I SYRCK D I +K KQ + E + VP ++ + +I + Sbjct: 117 VDIPSYRCKPQDFISIKD--KQGLRINENIKDKILRVPPHLKRIKKKLQYSGLVQKIIDN 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 175 Q---YIGLKINELLVVGYYSR 192 >gi|212004157|gb|ACJ15387.1| Rps4 [Pellaea atropurpurea] Length = 182 Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A ++RG T + LE RLD Sbjct: 15 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ + + L+ Sbjct: 74 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 132 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 133 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180 >gi|307602255|gb|ADN68009.1| ribosomal protein S4 [Hesperocyparis bakeri] Length = 189 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724447|gb|ABL10797.1| ribosomal protein small subunit 4 [Doryopteris triphylla] Length = 195 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ L Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEVRVLGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++V+ + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTVSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|289576416|dbj|BAI77782.1| ribosomal protein small subunit 4 [Hymenophyllum exsertum] Length = 187 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 5/189 (2%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G +N R Q K S F ++L AKQ+++ YG +E++ + A Sbjct: 1 LPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T L+ LE RLD IV+++ TI AARQ VNHRH+LVN V+I SYRCK Sbjct: 59 KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118 Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++ + + E + R +P++++ + + + + + Sbjct: 119 DLITIRNRPSSGS--KENIGFSRRKKIPDHLTFSFSEDKISRGLVNGIANRESIDLNINE 176 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 177 LLVVEYYSR 185 >gi|118724353|gb|ABL10750.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. californica] Length = 195 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 8/197 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 2 RRLKNLPGLAGKDNASNLGEFLVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLK 60 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I S Sbjct: 61 YIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPS 120 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDV 189 YR K D+I ++ + +V +VP++++++ + Sbjct: 121 YRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANRE 176 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 177 SVNLDINELLVVEYHSR 193 >gi|307602233|gb|ADN67998.1| ribosomal protein S4 [Cupressus cashmeriana] gi|307602235|gb|ADN67999.1| ribosomal protein S4 [Cupressus chengiana] gi|307602241|gb|ADN68002.1| ribosomal protein S4 [Cupressus gigantea] gi|307602243|gb|ADN68003.1| ribosomal protein S4 [Cupressus jiangeensis] gi|307602247|gb|ADN68005.1| ribosomal protein S4 [Cupressus torulosa] Length = 189 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K V + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724357|gb|ABL10752.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. mucronata] Length = 195 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFLVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|16930543|gb|AAL31953.1| ribosomal protein small subunit 4 [Woodwardia areolata] Length = 184 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 17 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ NHRH+LVN R V+I SYRCK D+I + + + L Sbjct: 76 VIFHLGMASTIPAARQLANHRHILVNNRIVDIPSYRCKPKDIITARNRPTSCNA-LRGES 134 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 135 PRGGETPDHLTASLSEGGRPTGFVNRI---ANRESVNLNINELLVVEYYSR 182 >gi|118724449|gb|ABL10798.1| ribosomal protein small subunit 4 [Doryopteris nobilis] gi|118724451|gb|ABL10799.1| ribosomal protein small subunit 4 [Doryopteris rediviva] Length = 195 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ L Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEVRVLGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R++G T + LE RLD I+++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARRTKGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++V+ + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTVSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|119331574|gb|ABL63113.1| small ribosomal protein subunit 4 [Riccardia palmata] Length = 167 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 5/166 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L KQK++ ++G ++E++ A +++G T L+ LE RLD ++ Sbjct: 4 NKKISQYRVRLEEKQKLRFHHG-LTERQLLKYVCVAKKAKGSTGQLLLQLLEMRLDNTIF 62 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R VPTI AARQ VNHRHVL+N V+I SY CK GD I +K + K + + Sbjct: 63 RLGMVPTIPAARQLVNHRHVLINANMVDIPSYNCKTGDTITIKNRGKNRLKLESNINSVQ 122 Query: 162 RD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P +++ + R + + LVVE+YSR Sbjct: 123 KPGIPNHLAFESMEFRGSVNRTIDR---EGIDLKINELLVVEYYSR 165 >gi|23477332|gb|AAN34642.1| ribosomal protein small subunit 4 [Woodwardia martinezii] Length = 185 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 8/167 (4%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD ++ R Sbjct: 22 RKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDNVISR 80 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 TI AARQ V+HRH+LVN R V++ SYRCK D+I V+ + + L Sbjct: 81 LGMASTIPAARQLVSHRHILVNNRIVDVPSYRCKPRDIITVRNRPTSCNA-LRGESPGGS 139 Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 140 ETPDHLTASLSEGNRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183 >gi|118724487|gb|ABL10817.1| ribosomal protein small subunit 4 [Cheilanthes skinneri] Length = 195 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 2/195 (1%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDPSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ V TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMVSTIPAARQLVSHRHILVNHRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SYRCK D+I ++ +S +V L VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRSTSYNAVKGKF-LERDKVPDHLTLSISKTSEQIGLVNHMANRESV 178 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 179 NLDINELLVVEYHSR 193 >gi|45271088|gb|AAS56928.1| ribosomal protein small subunit 4 [Asplenium juglandifolium] Length = 186 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 8/169 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +SE + + A ++RG T + LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LSECQLLRYVRIARKTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN V+I SYRC D+I V+ + + L+ Sbjct: 82 VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCNPKDIITVRNRPTSC-NALKNRS 140 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 P+++SV + R+ + + + LV E+Y Sbjct: 141 FVGYKTPDHLSVSFSEDNGPTGLVNRVGNR---ESINLNINELLVGEYY 186 >gi|307602239|gb|ADN68001.1| ribosomal protein S4 [Cupressus funebris] Length = 189 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K +R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTP-SRIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K V + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724393|gb|ABL10770.1| ribosomal protein small subunit 4 [Paraceterach muelleri] Length = 184 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 17 QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYIRIAKKTRGSTGQVLLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 76 VIFKLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 134 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE+YSR Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNYM---ANRESVNLDINELLVVEYYSR 182 >gi|165968071|gb|ABY75861.1| ribosomal protein small subunit 4 [Asplenium obtusatum] gi|190613944|gb|ACE80975.1| ribosomal protein small subunit 4 [Asplenium scleropium] Length = 188 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 21 QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ + S Sbjct: 80 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRKKSL 139 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ I + + LVVE+YSR Sbjct: 140 VGDKT-PNHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 186 >gi|82408945|gb|ABB73267.1| ribosomal protein small subunit 4 [Loxogramme salicifolia] Length = 184 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E + + A ++RG T + LE RLD Sbjct: 17 QSASRKISQFCIRLEAKQRLRLNYG-LAEHQLLKYVRVARKARGSTGQVPLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN VNI SYRCK D+I + + ++ Sbjct: 76 VIFHLGLASTVPAARQLVNHRHILVNNCVVNIPSYRCKPKDIITARNRPTSYDALRSKFT 135 Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P++++ D I + + LVVE+YSR Sbjct: 136 RGDKT-PDHLTSYLSEDDKPTGLVNCI---ANRESIKLDINELLVVEYYSR 182 >gi|32401900|gb|AAP80938.1| small ribosomal protein 4 [Calocedrus decurrens] Length = 190 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K + R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 2 PGLSKKTPH-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 59 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 60 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 119 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 120 LISIKEKQGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGVVKKIIDNKR---IGLK 176 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 177 INELLVVEYYSR 188 >gi|118724437|gb|ABL10792.1| ribosomal protein small subunit 4 [Astrolepis windhamii] gi|118724439|gb|ABL10793.1| ribosomal protein small subunit 4 [Astrolepis windhamii] gi|118724441|gb|ABL10794.1| ribosomal protein small subunit 4 [Astrolepis windhamii] Length = 195 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVK-IESLGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|18028064|gb|AAL55956.1| ribosomal protein S4 [Jamesonia imbricata] Length = 157 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 8/160 (5%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++L KQ++ YG ++E++ + A ++RG T L+ LE RLD I++R TI Sbjct: 1 VRLETKQRLLFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDNILFRLGMASTI 59 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 AARQ VNHRH+LVN R V+I SYRC D+I ++ + ++ + + +P++++ Sbjct: 60 PAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGESIGRDGIPDHLT 118 Query: 170 VNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ R+ + + LVVEFYSR Sbjct: 119 LSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 155 >gi|307602363|gb|ADN68063.1| ribosomal protein S4 [Juniperus sabina var. arenaria] gi|307602365|gb|ADN68064.1| ribosomal protein S4 [Juniperus sabina var. davurica] gi|307602367|gb|ADN68065.1| ribosomal protein S4 [Juniperus sabina var. sabina] Length = 189 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + +++++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMKKNIEISQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724429|gb|ABL10788.1| ribosomal protein small subunit 4 [Aspidotis carlotta-halliae] Length = 195 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKHNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD I+++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARRTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNHRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRGEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|190361261|gb|ACE76935.1| ribosomal protein small subunit 4 [Trichomanes scandens] Length = 167 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S FG++L AKQ+++ YG E++ + A +++G T L+ LE RLD IV+R Sbjct: 14 RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRHVLVN V+I SY CK+ D+I ++ + + + Sbjct: 73 LGMAPTIPAARQLVNHRHVLVNNHIVDIPSYCCKDKDLITLR-----------NQESSRK 121 Query: 163 DVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++ ++ +N I + + LVVE+YSR Sbjct: 122 RIPDHLKLSSLGSNNPKGLVNGI---ANRESIDLNINELLVVEYYSR 165 >gi|118724325|gb|ABL10736.1| ribosomal protein small subunit 4 [Pellaea breweri] gi|118724327|gb|ABL10737.1| ribosomal protein small subunit 4 [Pellaea breweri] Length = 195 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|82470507|gb|ABB77336.1| ribosomal protein S4-like protein [Loxogramme abyssinica] Length = 190 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 23 QSASRKISQFCIRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVSLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ T+ AARQ VNHRH+LVN V+I SYRCK D+I V+ + +++ Sbjct: 82 VIFQLGMASTVPAARQLVNHRHILVNNCVVDIPSYRCKPKDIITVRNRPTSSNALISKLT 141 Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P++++ + I + + LVVE+YSR Sbjct: 142 RGDKT-PDHLTSYLSEDNKPTGLVNCI---ANRESIKLDINELLVVEYYSR 188 >gi|118724365|gb|ABL10756.1| ribosomal protein small subunit 4 [Pellaea sp. UC1788706] gi|118724375|gb|ABL10761.1| ribosomal protein small subunit 4 [Pellaea ternifolia] gi|118724377|gb|ABL10762.1| ribosomal protein small subunit 4 [Pellaea ternifolia] gi|118724379|gb|ABL10763.1| ribosomal protein small subunit 4 [Pellaea ternifolia] Length = 195 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLVGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724509|gb|ABL10828.1| ribosomal protein small subunit 4 [Bommeria hispida] Length = 195 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLVGKDKASNLGEVRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ V+HRHVLVN R V+I Sbjct: 60 KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHVLVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + Sbjct: 120 SYRRKPNDIITIRNRPTSYNAAK-GESLGRDEVPDHLTLSISKTTEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVKLDINELLVVEYHSR 193 >gi|329118620|ref|ZP_08247324.1| 30S ribosomal protein S4 [Neisseria bacilliformis ATCC BAA-1200] gi|327465355|gb|EGF11636.1| 30S ribosomal protein S4 [Neisseria bacilliformis ATCC BAA-1200] Length = 118 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 4/121 (3%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 L+ LESRLD ++YR F T ARQ V+H+ V VNG+ VNI SY+ K GDV+ V++K Sbjct: 1 MLLQLLESRLDNVIYRMGFGSTRAEARQLVSHKAVTVNGQVVNIPSYQVKAGDVVAVREK 60 Query: 147 SKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 +K+ + EA L A+ P ++SV+ M F +P + + LVVEFYS Sbjct: 61 AKKQVRIQEALGLAAQIGFPGWVSVDTAKMEGIFKNMPDRSE---LSGDINEQLVVEFYS 117 Query: 206 R 206 + Sbjct: 118 K 118 >gi|307602291|gb|ADN68027.1| ribosomal protein S4 [Juniperus communis var. communis] gi|307602293|gb|ADN68028.1| ribosomal protein S4 [Juniperus communis var. depressa] Length = 189 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVTKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724369|gb|ABL10758.1| ribosomal protein small subunit 4 [Pellaea notabilis] Length = 190 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A ++RG T + LE RLD Sbjct: 23 QSXSKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ + + L+ Sbjct: 82 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 141 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 188 >gi|307602283|gb|ADN68023.1| ribosomal protein S4 [Juniperus californica] Length = 189 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K K + + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKDKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|41179020|ref|NP_958376.1| ribosomal protein S4 [Chlamydomonas reinhardtii] gi|1350892|sp|P48270|RR4_CHLRE RecName: Full=30S ribosomal protein S4, chloroplastic gi|862379|gb|AAA81363.1| 30S ribosomal protein S4 [Chlamydomonas reinhardtii] gi|28269743|tpg|DAA00921.1| TPA_inf: ribosomal protein S4 [Chlamydomonas reinhardtii] gi|213517403|gb|ACJ50109.1| ribosomal protein S4 [Chlamydomonas reinhardtii] Length = 257 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 18/175 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRK-------S 43 MS+ + ++ RRIG+ K P + PG HG + S Sbjct: 1 MSRYLGPRLRVIRRIGKLRGFTRKKPFRRVFKGFGGFKGKVIPPGQHGLTKLLKTRPYDS 60 Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 S + ++L+ KQ+++ YG I+E++ + ++A + + T L+ FLE RLD IV+R Sbjct: 61 SESDYLIRLKVKQRLRFNYG-ITERQLVNYVRKAKKIKESTGQVLLQFLEMRLDNIVFRL 119 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 PTI AARQ ++H H+ VN + VNI SY CK DVI V K + L V + Q Sbjct: 120 NMAPTIPAARQLISHGHIRVNNKKVNIPSYMCKPKDVISVAMKQRSLQLVNKNLQ 174 >gi|190361231|gb|ACE76920.1| ribosomal protein small subunit 4 [Callistopteris apiifolia] Length = 167 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 22/184 (11%) Query: 26 PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 +N R ++ S F ++L AKQ+++ YG +E++ + A +++G T Sbjct: 1 TLNMREAATDQSARK----VSQFCVRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTG 55 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 L+ LE RLD IV++ PTI AARQ VNHRH+LVN V+I SYRCK D+I + Sbjct: 56 QVLLQLLEMRLDNIVFQLGMAPTIPAARQLVNHRHILVNNHIVDIPSYRCKPKDIITPR- 114 Query: 146 KSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVE 202 + +++ +P+++ ++ + + I + + LVVE Sbjct: 115 ----------NREYSKKKIPDHLILSFEEGNRLKGLVNGI---ANRESIDLNINELLVVE 161 Query: 203 FYSR 206 +YSR Sbjct: 162 YYSR 165 >gi|16930564|gb|AAL31959.1| ribosomal protein small subunit 4 [Goniopteris poiteana] Length = 189 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S+F ++L AKQ+++ +YG ++E++ + A ++ G T + LE RLD Sbjct: 22 QSSSRKISHFCVRLEAKQRLRFHYG-LTERQLPRYVRIARKTTGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ + TI AARQ V +H+LVN V+I SYRCK D+I V+ + + L Sbjct: 81 VIFHLRMASTIPAARQLVYLKHILVNNHIVDIPSYRCKPKDIITVRNRPTSHNA-LGGES 139 Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++ + + R+ + + LVVE+YSR Sbjct: 140 LVGGKTPDHLTISLLEGNRPTGLVNRV---ANRESVNLSINELLVVEYYSR 187 >gi|307602389|gb|ADN68076.1| ribosomal protein S4 [Microbiota decussata] Length = 189 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKEGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|307602295|gb|ADN68029.1| ribosomal protein S4 [Juniperus communis var. saxatilis] Length = 189 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNNR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|190361229|gb|ACE76919.1| ribosomal protein small subunit 4 [Trichomanes ankersii] Length = 167 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S FG++L AKQ+++ YG +E++ + A +++G T L+ LE RLD IV+R Sbjct: 14 RKVSQFGIRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRHVLVN V+I SYRCK D+I ++ + + + Sbjct: 73 LGMAPTIPAARQLVNHRHVLVNNHIVDIPSYRCKHKDLITLR-----------SQESFRK 121 Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++ + +++ I + + + LVVE+YSR Sbjct: 122 RIPDHLTFSSLEGNSIKGLINGIANRD---SIDLNINELLVVEYYSR 165 >gi|307602285|gb|ADN68024.1| ribosomal protein S4 [Juniperus chinensis] gi|307602307|gb|ADN68035.1| ribosomal protein S4 [Juniperus excelsa] gi|307602317|gb|ADN68040.1| ribosomal protein S4 [Juniperus gaussenii] gi|307602347|gb|ADN68055.1| ribosomal protein S4 [Juniperus polycarpos] Length = 189 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 FISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|23477326|gb|AAN34639.1| ribosomal protein small subunit 4 [Woodwardia harlandii] Length = 185 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S ++ AKQ ++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSXSRKISXGCVRXEAKQTLRLNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V++ SYRCK D+I + + + L Sbjct: 77 IIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LRGES 135 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 136 PGGSETPDHLTASLXEGNRPTGLVNRI---ANRESVNLDINELLVVEYYSR 183 >gi|42794660|gb|AAS45727.1| Rps4 [Macleania coccoloboides] Length = 211 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 11/172 (6%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K K + ++L+ KQK++ +YG ++E++ + A +++G T L+ LE RLD I++ Sbjct: 40 KKKKLQYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 98 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQL 159 R TI ARQ VNHRHVLVNGR ++I SYRCK D+I ++KS+ S L Sbjct: 99 RLGMASTIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDL 158 Query: 160 AERD-----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R VP ++++N +I + ++ LVVE+YSR Sbjct: 159 PSRKQKRKRVPXHLTLNRGQYKGLVKQI---XNXKWVGLKIKELLVVEYYSR 207 >gi|45271074|gb|AAS56925.1| ribosomal protein small subunit 4 [Ceratopteris thalictroides] Length = 185 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 18 QSVSKKISQFCIRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + SV + Sbjct: 77 IIFQLGLASTIPAARQLVNHRHILVNQRIVDIPSYRRKPKDIITIRNRPTSYNSVKK-ES 135 Query: 159 LAERDVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ D + + + LVVE+YSR Sbjct: 136 FEGQKIPDHLTLSLLKTDQPTGLVNHM---ASRESVDLNLNELLVVEYYSR 183 >gi|289576412|dbj|BAI77780.1| ribosomal protein small subunit 4 [Hymenophyllum serrulatum] Length = 186 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 11/191 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G +N R Q K S F ++L AKQ+++ YG +E++ + A + Sbjct: 1 PGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARK 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD IV+++ TI AARQ VNHRHVLVN V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHVLVNNHIVDIPSYRCKPKD 118 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIM 195 +I V+ + + E + R +P++++ + I + + Sbjct: 119 LITVRNRPSSGS--KENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNI 173 Query: 196 QPNLVVEFYSR 206 LVVE+YSR Sbjct: 174 NELLVVEYYSR 184 >gi|118724349|gb|ABL10748.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. californica] Length = 195 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 8/197 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 2 RRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLK 60 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I S Sbjct: 61 YIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPS 120 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDV 189 YR K D+I ++ + +V +VP++++++ + Sbjct: 121 YRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANRE 176 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 177 SVNLDINELLVVEYHSR 193 >gi|118724351|gb|ABL10749.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. californica] gi|118724359|gb|ABL10753.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. mucronata] gi|118724361|gb|ABL10754.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. mucronata] gi|118724363|gb|ABL10755.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. mucronata] gi|118724383|gb|ABL10765.1| ribosomal protein small subunit 4 [Pellaea truncata] gi|118724387|gb|ABL10767.1| ribosomal protein small subunit 4 [Pellaea wrightiana] Length = 195 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|82394715|gb|ABB72436.1| ribosomal protein small subunit 4 [Loxogramme abyssinica] Length = 186 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 19 QSASRKISQFCIRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVSLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN V+I SYRCK D+I V+ + +++ Sbjct: 78 VIFHLGMASTVPAARQLVNHRHILVNNCVVDIPSYRCKPKDIITVRNRPTSSNALISKLT 137 Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P++++ + I + + LVVE+YSR Sbjct: 138 RGDKT-PDHLTSYLSEDNKPTGLVNCI---ANRESIKLDINELLVVEYYSR 184 >gi|307602405|gb|ADN68084.1| ribosomal protein S4 [Xanthocyparis vietnamensis] Length = 189 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 FISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|212004187|gb|ACJ15402.1| Rps4 [Pellaea sagittata] Length = 188 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + +E RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLIEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|306773472|emb|CBJ55312.1| putative ribosomal protein small subunit 4 [Cyathea senilis] Length = 163 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 39/199 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R+ Sbjct: 40 RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRT 99 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 V++ SYRCK D+I V ++P++++ + + RI Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 RESIDLNINELLVVEYYSR 160 >gi|307602277|gb|ADN68020.1| ribosomal protein S4 [Juniperus ashei] gi|307602279|gb|ADN68021.1| ribosomal protein S4 [Juniperus bermudiana] gi|307602281|gb|ADN68022.1| ribosomal protein S4 [Juniperus blancoi] gi|307602299|gb|ADN68031.1| ribosomal protein S4 [Juniperus deltoides] gi|307602301|gb|ADN68032.1| ribosomal protein S4 [Juniperus deppeana] gi|307602305|gb|ADN68034.1| ribosomal protein S4 [Juniperus durangensis] gi|307602309|gb|ADN68036.1| ribosomal protein S4 [Juniperus flaccida] gi|307602315|gb|ADN68039.1| ribosomal protein S4 [Juniperus gamboana] gi|307602319|gb|ADN68041.1| ribosomal protein S4 [Juniperus gracilior] gi|307602321|gb|ADN68042.1| ribosomal protein S4 [Juniperus horizontalis] gi|307602327|gb|ADN68045.1| ribosomal protein S4 [Juniperus barbadensis var. lucayana] gi|307602329|gb|ADN68046.1| ribosomal protein S4 [Juniperus microsperma] gi|307602331|gb|ADN68047.1| ribosomal protein S4 [Juniperus monosperma] gi|307602333|gb|ADN68048.1| ribosomal protein S4 [Juniperus monticola] gi|307602335|gb|ADN68049.1| ribosomal protein S4 [Juniperus occidentalis] gi|307602337|gb|ADN68050.1| ribosomal protein S4 [Juniperus osteosperma] gi|307602339|gb|ADN68051.1| ribosomal protein S4 [Juniperus oxycedrus] gi|307602341|gb|ADN68052.1| ribosomal protein S4 [Juniperus phoenicea] gi|307602369|gb|ADN68066.1| ribosomal protein S4 [Juniperus saltillensis] gi|307602373|gb|ADN68068.1| ribosomal protein S4 [Juniperus saxicola] gi|307602375|gb|ADN68069.1| ribosomal protein S4 [Juniperus scopulorum] gi|307602377|gb|ADN68070.1| ribosomal protein S4 [Juniperus semiglobosa] gi|307602381|gb|ADN68072.1| ribosomal protein S4 [Juniperus taxifolia] gi|307602387|gb|ADN68075.1| ribosomal protein S4 [Juniperus virginiana] Length = 189 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724435|gb|ABL10791.1| ribosomal protein small subunit 4 [Astrolepis cochisensis] Length = 195 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVXGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|306773466|emb|CBJ55309.1| putative ribosomal protein small subunit 4 [Cyathea howeana] Length = 163 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R Sbjct: 40 RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRI 99 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 V++ SYRCK D+I V ++P++++ + + RI Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 RESIDLNINELLVVEYYSR 160 >gi|125662680|gb|ABN50290.1| small ribosomal protein 4 [Calocedrus macrolepis] Length = 194 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 11/198 (5%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P R P + K S + ++L+ KQ+++ +YG + E++ Sbjct: 1 RLKTLPGLSKKTP--NRIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 58 VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKD 188 RCK D+I +K+K + + ++ ++D VP +++ + + + Sbjct: 118 RCKPQDLISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKK---RIDN 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 KRIGLKINELLVVEYYSR 192 >gi|118724459|gb|ABL10803.1| ribosomal protein small subunit 4 [Cheilanthes buchtienii] Length = 195 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + + L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRLTSNNAAK-GKSLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|37992521|gb|AAR06439.1| small ribosomal protein 4 [Floribundaria sparsa var. pilifer] Length = 170 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 5/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S F ++L KQK + +YG I++++ + + A +++G T + E R D Sbjct: 4 STXNKKISQFRIRLEEKQKXRXHYG-ITDRQXLNYVRIARKAKGSTGEVSLQLPEMRSDN 62 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R PTI ARQ VNHRH+LVN V+I SYR K D I +K + K + + + Sbjct: 63 VIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRXKPQDFITIKNQRKSETIIGKNIE 122 Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ ++P +++ + +I L + + LV E+YSR Sbjct: 123 FYQKSEIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVGEYYSR 168 >gi|16930548|gb|AAL31955.1| ribosomal protein small subunit 4 [Matteuccia struthiopteris] Length = 195 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 IRRLKNLPGFTGKGKTTNLGESRVATDQSASRKISQFCVRLEAKQRLRFNYG-LTERQPL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD +++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 KYVRIARKTRGSTGQVPLQPLEMRLDNVIFHLGMASTIPAARQLVNHRHILVNSRVVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKD 188 SYRCK D+ V+ + + L L P++++ + RI Sbjct: 120 SYRCKPKDITTVRNRPTSCNA-LRGESLGGDKTPDHLTASISEGNRPTGLVNRI---ASR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+Y R Sbjct: 176 ESVNLNINELLVVEYYPR 193 >gi|108861110|gb|ABG21427.1| ribosomal protein small subunit 4 [Marsilea polycarpa] Length = 156 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 9/157 (5%) Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 KQ+++ YG ++E++ + A +++G T L+ LE RLD IV++ PTI AARQ Sbjct: 2 KQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQ 60 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS--- 169 VNHRH+LVN R V++ SYRC+ D+I V+ + + + R ++P+++S Sbjct: 61 LVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSV 120 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + ++ K + + L+VE+YSR Sbjct: 121 LEGNKPKGVVNQV---AKRESMDLNINELLIVEYYSR 154 >gi|290467473|gb|ADD25854.1| small ribosomal protein 4 [Hymenophyllum malingii] Length = 191 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 12/176 (6%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A +++G T L+ LE RLD Sbjct: 18 QSSSRKVSQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK----SKQLASVL 154 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + S + Sbjct: 77 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSNSGSK 136 Query: 155 EASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 E + + R +P++++ + I + + LVVE+YSR Sbjct: 137 ENIEFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 189 >gi|118724313|gb|ABL10730.1| ribosomal protein small subunit 4 [Pellaea andromedifolia] gi|118724315|gb|ABL10731.1| ribosomal protein small subunit 4 [Pellaea andromedifolia var. pubescens] Length = 195 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYRCK D+I ++ + + +VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRPTSYNAAKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724469|gb|ABL10808.1| ribosomal protein small subunit 4 [Cheilanthes feei] Length = 195 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ ++ +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSFSKTSEPTGLVNHM---ASR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|18027994|gb|AAL55921.1| ribosomal protein S4 [Eriosorus rufescens] Length = 191 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I + + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + VEFYSR Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESLDLEINELFXVEFYSR 189 >gi|118724319|gb|ABL10733.1| ribosomal protein small subunit 4 [Pellaea atropurpurea] Length = 170 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A ++RG T + LE RLD Sbjct: 3 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 61 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ + + L+ Sbjct: 62 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 120 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 121 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 168 >gi|125662702|gb|ABN50301.1| small ribosomal protein 4 [Taxodium mucronatum] Length = 197 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R+ K+P R+ P + KPS + ++L+ KQ+++ +YG ++E++ Sbjct: 2 INRLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLL 58 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I Sbjct: 59 QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIP 118 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSL 186 SYRCK D I +K K + + + ++D VP +++ +I + Sbjct: 119 SYRCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDNN 178 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 179 R---IGLKINELLVVEYYSR 195 >gi|190361233|gb|ACE76921.1| ribosomal protein small subunit 4 [Trichomanes arbuscula] Length = 167 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S FG++L AKQ+++ YG E++ + A R++G T L+ LE RLD IV+R Sbjct: 14 RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIVFR 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRHVLVN V+I SYRCK+ D+I ++ + + + + Sbjct: 73 LDMAPTIPAARQLVNHRHVLVNNHIVDIPSYRCKDKDLITLR-----------SQESSRK 121 Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++ ++ +N I + + LVVE+YSR Sbjct: 122 RIPDHLELSSSEGNNPKGLVNGI---ANRESIDLNINELLVVEYYSR 165 >gi|118724405|gb|ABL10776.1| ribosomal protein small subunit 4 [Paragymnopteris vestita] Length = 180 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 13 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR D+I ++ + +V Sbjct: 72 VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAVKV-ES 130 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +VP++++++ + + + LVVE++SR Sbjct: 131 FGKDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178 >gi|307602349|gb|ADN68056.1| ribosomal protein S4 [Juniperus procera] Length = 189 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMKKNIENFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|307602251|gb|ADN68007.1| ribosomal protein S4 [Hesperocyparis abramsiana] gi|307602253|gb|ADN68008.1| ribosomal protein S4 [Hesperocyparis arizonica] gi|307602257|gb|ADN68010.1| ribosomal protein S4 [Hesperocyparis forbesii] gi|307602259|gb|ADN68011.1| ribosomal protein S4 [Hesperocyparis glabra] gi|307602261|gb|ADN68012.1| ribosomal protein S4 [Hesperocyparis goveniana] gi|307602263|gb|ADN68013.1| ribosomal protein S4 [Hesperocyparis lusitanica] gi|307602265|gb|ADN68014.1| ribosomal protein S4 [Hesperocyparis macnabiana] gi|307602267|gb|ADN68015.1| ribosomal protein S4 [Hesperocyparis macrocarpa] gi|307602269|gb|ADN68016.1| ribosomal protein S4 [Hesperocyparis montana] gi|307602271|gb|ADN68017.1| ribosomal protein S4 [Hesperocyparis sargentii] gi|307602273|gb|ADN68018.1| ribosomal protein S4 [Hesperocyparis stephensonii] Length = 189 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMNKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|307602311|gb|ADN68037.1| ribosomal protein S4 [Juniperus formosana var. formosana] gi|307602359|gb|ADN68061.1| ribosomal protein S4 [Juniperus rigida var. conferta] gi|307602361|gb|ADN68062.1| ribosomal protein S4 [Juniperus rigida var. rigida] Length = 189 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|51860517|gb|AAU11395.1| ribosomal protein small subunit 4 [Ephedra cutleri] Length = 191 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 14/196 (7%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 K P + +H R K S + + L+ KQK++ +YG ++E++ R Sbjct: 2 TLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTERQLRQYVH 56 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN V+I SYRC Sbjct: 57 IAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDIPSYRC 116 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSSLKDVP 190 K D+I +K K + + + VP Y++ N +I + Sbjct: 117 KPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDTKD--- 173 Query: 191 YPVIMQPNLVVEFYSR 206 + ++ LV+E+YSR Sbjct: 174 LQLKIKEMLVIEYYSR 189 >gi|17154629|emb|CAC83926.1| ribosomal protein S4 [Klattia flava] Length = 175 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G + P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALXGLTSRRP----RSGSDLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K K + A + + + ++P ++++N +I S + Sbjct: 116 KPRDIISTKNKQRSKALIQNFIASSPQQEELPNHLTINPFQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQ 196 + Sbjct: 173 KIN 175 >gi|23477330|gb|AAN34641.1| ribosomal protein small subunit 4 [Woodwardia kempii] Length = 185 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S ++ AKQ ++ YG ++E++ + A ++RG T LE RLD Sbjct: 18 QSXSRKISXGCVRXEAKQTLRLNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V++ SYRCK D+I + + + L Sbjct: 77 IIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LRGES 135 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P++++ + RI + + LVVE+YSR Sbjct: 136 PGGSETPDHLTASLXEGNRPTGLVNRI---ANRESVNLDINELLVVEYYSR 183 >gi|99639975|emb|CAJ45132.1| putative ribosomal protein S4 gene [Culcita coniifolia] Length = 188 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 14/193 (7%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G+ +P R Q K S F ++L AKQ+++ YG ++E+ R + A Sbjct: 3 LTGKATNPGEARVAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTERLLR-YVRIAR 56 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 +++G T + LE RLD ++ + TI AARQ VNHRH+LVN R V+I SYRCK Sbjct: 57 KTKGSTGQVPLQLLEMRLDNTIFHSGMTSTIPAARQLVNHRHILVNDRIVDIPSYRCKPK 116 Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193 D+I V+ + + R P+++++ + RI + Sbjct: 117 DIITVRDRPTSCNGPRSGINESSRGDKTPDHLTLSLSEDNRPKGLVNRI---ANRESIEL 173 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 174 NINELLVVEYYSR 186 >gi|119472063|ref|ZP_01614321.1| 30S ribosomal protein S4 [Alteromonadales bacterium TW-7] gi|119445198|gb|EAW26490.1| 30S ribosomal protein S4 [Alteromonadales bacterium TW-7] Length = 122 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 6/123 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++++ PG HG RK + S +GLQLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 K+++ YG + EK+FR+ +KEA R +G+T NL+ LE RLD +VYR F T ARQ V Sbjct: 60 KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118 Query: 117 NHR 119 +H+ Sbjct: 119 SHK 121 >gi|307602313|gb|ADN68038.1| ribosomal protein S4 [Juniperus formosana var. mairei] Length = 189 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIMNKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724373|gb|ABL10760.1| ribosomal protein small subunit 4 [Pellaea sagittata] Length = 191 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + +E RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLIEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 83 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 142 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189 >gi|212004233|gb|ACJ15425.1| Rps4 [Astrolepis windhamii] Length = 188 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE++SR Sbjct: 139 LGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|32401886|gb|AAP80931.1| small ribosomal protein 4 [Taiwania cryptomerioides] Length = 193 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R KPS + ++L+ KQ+++ +YG ++E++ + A R Sbjct: 1 PGLSKKTPN-RIEQSSQKKHSXPPKPSKYPVRLKEKQRLRFHYG-LTERQLFQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERDV---PEYISVNHDNMV------ATFVRIPSSLKDVP 190 +I +K K + + + + ++D P ++++ M +I S + Sbjct: 119 LISIKDKQRLRNIINKNRDIFQKDKMRGPPHLNLIKKTMKKKLQYIGLVKKIIDSNR--- 175 Query: 191 YPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 176 FGLKINELLVVEYYSR 191 >gi|190361237|gb|ACE76923.1| ribosomal protein small subunit 4 [Polyphlebium borbonicum] Length = 155 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 19/168 (11%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L+AKQK++ YG ++E++ + A R++G T L+ LE RLDTIVY+ Sbjct: 1 RKISQFCVRLQAKQKLRFNYG-LTERQLLKYVRIARRAKGSTGQILLQLLEMRLDTIVYQ 59 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRH+LVN VNI SYRCK D+I +K + QL + Sbjct: 60 LGMAPTIPAARQLVNHRHILVNNHIVNIPSYRCKPKDLITLK-----------SRQLLTK 108 Query: 163 DVPEYISVNHDN----MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P++++V+ + I + + LVVE+YSR Sbjct: 109 KRPDHLTVSSEGGERPKEGLVNAI---ANRESIELNINELLVVEYYSR 153 >gi|307602275|gb|ADN68019.1| ribosomal protein S4 [Juniperus angosturana] gi|307602287|gb|ADN68025.1| ribosomal protein S4 [Juniperus coahuilensis] gi|307602289|gb|ADN68026.1| ribosomal protein S4 [Juniperus comitana] gi|307602343|gb|ADN68053.1| ribosomal protein S4 [Juniperus pinchotii] Length = 189 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 LIFIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|190361251|gb|ACE76930.1| ribosomal protein small subunit 4 [Didymoglossum krausii] Length = 152 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 18/165 (10%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S F ++L AKQ+++ YG +E++ + A R++G T L+ LE RLD IV++ Sbjct: 1 ISQFCIRLEAKQRLRFNYGS-TERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIVFQLG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164 PTI AARQ VNHRH+LVN VNI SYRCK D+I L + + + + Sbjct: 60 MAPTIPAARQLVNHRHILVNNCIVNIPSYRCKPKDLIT-----------LNSREFFRKII 108 Query: 165 PEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P +++ + ++ I + + LVVE+YSR Sbjct: 109 PNHLTLSFLESNSPKGLVNGI---ANRESIDLNINELLVVEYYSR 150 >gi|307602403|gb|ADN68083.1| ribosomal protein S4 [Thujopsis dolabrata] Length = 189 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISV--NHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + + ++D VP +++ A +I + + + Sbjct: 119 LISIKEKQGLINIINKNRDIFKKDNMRVPPHLNWINKKSQYSALVNKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|82408943|gb|ABB73266.1| ribosomal protein small subunit 4 [Loxogramme grammitoides] Length = 180 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E + + A ++RG T + LE RLD Sbjct: 13 QSASRKISQFCIRLEAKQRLRLNYG-LTEXQLLKYVRVARKARGSTGQVPLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN V+I SYRCK D+I + + ++ Sbjct: 72 VIFHLGLASTVPAARQLVNHRHILVNNCVVDIPSYRCKPKDIITARNRPTSYDALRSKFT 131 Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P++++ + I + + LVVE+YSR Sbjct: 132 RGDKT-PDHLTSYLSEDNKPTGLVNCI---ANRESIKLDINELLVVEYYSR 178 >gi|306773478|emb|CBJ55315.1| putative ribosomal protein small subunit 4 [Sphaeropteris celebica] Length = 163 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R Sbjct: 40 RXLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRI 99 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 V++ SYRCK D+I V ++P++++ + + RI Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 RESIDLNINELLVVEYYSR 160 >gi|32401882|gb|AAP80929.1| small ribosomal protein 4 [Cryptomeria japonica] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 11/198 (5%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P R+ P + KPS + ++L+ KQ+++ +YG ++E++ Sbjct: 2 RLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLLQY 58 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SY Sbjct: 59 VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIPSY 118 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKD 188 RCK D I +K K + + + ++D VP +++ +I + + Sbjct: 119 RCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDNNR- 177 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 178 --IGLKINELLVVEYYSR 193 >gi|118724463|gb|ABL10805.1| ribosomal protein small subunit 4 [Cheilanthes distans] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 2/195 (1%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + + A R+RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 NYVRIARRTRGSTGQVSLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SYR K D+I ++ + + L +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTLSISKTSEPTGSVNHMANRESV 178 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 179 NLDINELLVVEYHSR 193 >gi|80974160|gb|ABB53773.1| small ribosomal subunit protein 4 [Glyphothecium gracile] Length = 153 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 5/155 (3%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK++ +YG I+E++ + + A +++G T L+ LE RLD I++R PTI A Sbjct: 1 EEKQKVRFHYG-ITERQLPNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGA 59 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171 RQ VNHRH+LVN VNI SYRCK D I +K K + + ++ +P +++ + Sbjct: 60 RQLVNHRHILVNDCIVNIPSYRCKPQDFIIIKNKQNSEVVINKNKDFYQKYKIPNHLTYS 119 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + LVV +YSR Sbjct: 120 FLEKKGLVNKI---LDRESIGLRINELLVVVYYSR 151 >gi|118724355|gb|ABL10751.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp. californica] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I Sbjct: 60 KYVRIARXTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|307602217|gb|ADN67990.1| ribosomal protein S4 [Callitropsis nootkatensis] Length = 189 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ + +I + + + Sbjct: 119 LISIKEKQGLRNIMNKNIEIFQKDKMRVPPHLNRIKQNSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|45271072|gb|AAS56924.1| ribosomal protein small subunit 4 [Bommeria ehrenbergiana] Length = 188 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRINYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + + Sbjct: 80 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPNDIITIRNRPTSYNAAK-GES 138 Query: 159 LAERDVPEYISVNHDNM---VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++P++++++ + + + LVVE++SR Sbjct: 139 LGRNEIPDHLTLSISKTNESTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|307602249|gb|ADN68006.1| ribosomal protein S4 [Fokienia hodginsii] Length = 189 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N + P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-KIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPRD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|32401862|gb|AAP80919.1| small ribosomal protein 4 [Sciadopitys verticillata] Length = 188 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 19/195 (9%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N R K S + ++L+ KQ+ + +YG ++E++ + A Sbjct: 4 LPGLSKKKPNFRIEP--------NRKKSQYRVRLKEKQRARFHYG-LTERQLLQYVRIAK 54 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 RS+G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 55 RSKGSTGEILLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVNNRMVDIPSYRCKPQ 114 Query: 139 DVIEVKQKSKQLASVLEASQLAERD-----VPEYISVN--HDNMVATFVRIPSSLKDVPY 191 D+I ++ + + + + +RD V +++++ + +I + Sbjct: 115 DMISIRDQQRSKNRIQKNIDFYQRDKMSGKVLNHLNLSIQKSQYIGLVNQIIDIKQ---I 171 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 172 GLKINELLVVEYYSR 186 >gi|212004245|gb|ACJ15431.1| Rps4 [Cheilanthes yavapensis] Length = 182 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 15 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ ++ +V Sbjct: 74 VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVK-GES 132 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 133 FGRDEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180 >gi|290467465|gb|ADD25850.1| small ribosomal protein 4 [Hymenophyllum acanthoides] Length = 185 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 10/172 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 18 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E Sbjct: 77 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSGS--KENIG 134 Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + LVVE+YSR Sbjct: 135 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFNINELLVVEYYSR 183 >gi|212004185|gb|ACJ15401.1| Rps4 [Pellaea ovata] Length = 195 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-MTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ + +V + VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGKDQVPDHLTLSISKTNEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724323|gb|ABL10735.1| ribosomal protein small subunit 4 [Pellaea breweri] gi|212004165|gb|ACJ15391.1| Rps4 [Pellaea breweri] Length = 188 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|25986661|gb|AAN52767.1| ribosomal protein small subunit 4 [Selliguea feei] Length = 191 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + ++ Sbjct: 83 VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 142 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ + + + + LVVE+YSR Sbjct: 143 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 189 >gi|307602391|gb|ADN68077.1| ribosomal protein S4 [Platycladus orientalis] Length = 189 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIKKPIKKKHFKPIKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++D VP +++ +I + + + Sbjct: 119 LISIKEKEGSKNRIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|306773474|emb|CBJ55313.1| putative ribosomal protein small subunit 4 [Sphaeropteris aeneifolia] Length = 162 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 LKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTER 39 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V Sbjct: 40 XLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIV 99 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 ++ SYRCK D+I V ++P++++ + + RI Sbjct: 100 DVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANR 141 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 ESIDLNINELLVVEYYSR 159 >gi|86211247|gb|ABC87296.1| small ribosomal protein 4 [Hymenophyllum acanthoides] Length = 180 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 10/172 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD Sbjct: 13 QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV+++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + + E Sbjct: 72 IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSGS--KENIG 129 Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R +P++++ + I + LVVE+YSR Sbjct: 130 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFNINELLVVEYYSR 178 >gi|212004163|gb|ACJ15390.1| Rps4 [Pellaea breweri] Length = 187 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|190361265|gb|ACE76937.1| ribosomal protein small subunit 4 [Cephalomanes javanicum] Length = 167 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD IV++ Sbjct: 14 RKVSEFCVRLEAKQRLRFNYGP-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQ 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRH+L+N V+I SYRCK D+I ++ + + + Sbjct: 73 LGIAPTIPAARQLVNHRHILINNHMVDIPSYRCKPKDLITLR-----------NPESSRK 121 Query: 163 DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++ + + I + + + LVVE+YSR Sbjct: 122 KIPDHLTLSFLEGNRPNGLVNGIVNR---ESIDLNINELLVVEYYSR 165 >gi|190361247|gb|ACE76928.1| ribosomal protein small subunit 4 [Polyphlebium endlicherianum] Length = 165 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 19/168 (11%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L+AKQK++ YG +E++ + A R++G T L+ LE RLDTIVY+ Sbjct: 11 RKISQFCVRLQAKQKLRFNYGS-TERQLLKYVRIARRAKGSTGQILLQLLEMRLDTIVYQ 69 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRH+LVN V+I SYRCK D+I ++ + + + Sbjct: 70 LGMAPTIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITLRSRKPLM-----------K 118 Query: 163 DVPEYISVNHDN----MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P++++V+ + I + + LVVE+YSR Sbjct: 119 KRPDHLTVSSEEDKRPKEGLVNAI---ANRESIELNINELLVVEYYSR 163 >gi|118724389|gb|ABL10768.1| ribosomal protein small subunit 4 [Pellaea x glaciogena] Length = 192 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 25 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 84 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 142 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 143 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 190 >gi|212004229|gb|ACJ15423.1| Rps4 [Astrolepis cochisensis subsp. cochisensis] Length = 188 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|310707247|gb|ADP08973.1| Rps4 [Lindsaea virescens] Length = 188 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 3/189 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 NL G N + + K S F ++LRAKQ+++ YG ++E++ + A Sbjct: 1 NLPGLTGKTSNLGENRV-ANDESASRKISQFCVRLRAKQRLRFNYG-LTERELLKYVRIA 58 Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 +++G T L+ LE RLD I+++ TI AARQ VNHRH+LVN R V++ SYRCK Sbjct: 59 RKTKGSTGQVLLQLLEMRLDNILFQLGLASTIPAARQLVNHRHILVNHRIVDVPSYRCKP 118 Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 D+I ++ + + + E D+P +++V+ + S + + Sbjct: 119 KDIITIRHQLISYNK-MGSKLFGEGDIPHHLTVSLSENNRPVGFVNSIANRECVDLNINE 177 Query: 198 NLVVEFYSR 206 LVVE+YSR Sbjct: 178 LLVVEYYSR 186 >gi|42794683|gb|AAS45738.1| Rps4 [Satyria leucostoma] Length = 211 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K K S + ++L+ KQK++ +YG ++E++ + A +++G T L+ LE RLD I++ Sbjct: 40 KKKKSQYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 98 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQL 159 R TI ARQ VNHRHVLVNGR ++I SYRCK D+I ++KS+ S L Sbjct: 99 RLGMASTIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIIPAREKSRALIQNSFQNLFDL 158 Query: 160 AERD-----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R VP ++++N +I ++ + ++ LVVE+YSR Sbjct: 159 PSRKRKRKRVPYHLTLNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|16930584|gb|AAL31960.1| ribosomal protein small subunit 4 [Thelypteris palustris] Length = 156 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 8/159 (5%) Query: 51 QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 +L AKQ+++ YG ++E++ + ++RG T + LE RLD +++R TI Sbjct: 1 RLEAKQRLRFNYG-LTERQLLKYVRIXRKTRGSTGQVPLQLLEMRLDNVIFRLGMASTIP 59 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV 170 A RQ VNHRH+LVN R V+I SYRCK D+I V+ + + L P++++V Sbjct: 60 AXRQLVNHRHILVNNRIVDIPSYRCKPKDIITVRNRPTSY-NALRGESPGGDKTPDHLTV 118 Query: 171 ---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R+ + + LVVE+YSR Sbjct: 119 SLLEGNRPTGLVNRV---ANRESVNLNINELLVVEYYSR 154 >gi|74273235|gb|ABA01317.1| ribosomal protein S4 [Barteria sp. LBF-2005] Length = 160 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 6/165 (3%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P + G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GTLPGLTSKRP----NSGSDLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLVRYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 K D+I K K + A + ++P++++++ Sbjct: 116 KPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 160 >gi|307602351|gb|ADN68057.1| ribosomal protein S4 [Juniperus procumbens] Length = 189 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 FISIKEKQGLRNIMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|212004189|gb|ACJ15403.1| Rps4 [Pellaea sagittata] Length = 178 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 70 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 128 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 129 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 176 >gi|51458117|gb|AAU03408.1| ribosomal protein small subunit 4 [Asplenium viride] Length = 167 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 8/170 (4%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S F ++L AKQ + YG +++++ + A R+RG T + LE RLD + Sbjct: 1 STSRKISQFCVRLEAKQILHFNYG-LTQRQLLRYVRIARRTRGSTGQVPLQLLEMRLDNV 59 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++ TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S + Sbjct: 60 LFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSLV 119 Query: 160 AERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P++++V D R+ + + LVVE+YSR Sbjct: 120 GDKT-PDHLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 165 >gi|118724495|gb|ABL10821.1| ribosomal protein small subunit 4 [Cheilanthes wrightii] Length = 195 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARITRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVATFVRIPSSLKD 188 SYRCK D+I ++ + +V +VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRPTSYNAVK-GESFGRDEVPDHLTLSISQTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|212004177|gb|ACJ15397.1| Rps4 [Pellaea lyngholmii] Length = 187 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|212004181|gb|ACJ15399.1| Rps4 [Pellaea mucronata] Length = 188 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 21 QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|307602399|gb|ADN68081.1| ribosomal protein S4 [Thuja plicata] Length = 189 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQK++ +YG + E++ + A R Sbjct: 1 PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQKLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++E+D VP +++ A +I + + + Sbjct: 119 LISIKEKQGLINIINQNIFISEQDQMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|190361239|gb|ACE76924.1| ribosomal protein small subunit 4 [Abrodictyum caudatum] Length = 167 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD IV++ Sbjct: 14 RKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQ 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRH+LVN V+I SYRCK D+I ++ + + + + Sbjct: 73 FGMAPTIPAARQLVNHRHILVNNTIVDIPSYRCKPKDLITLR-----------SQESSRK 121 Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++ + + I + + LVVE+YSR Sbjct: 122 KIPDHLVFSSSEGNKPTGLVNEI---ASRESIDLNINELLVVEYYSR 165 >gi|118724457|gb|ABL10802.1| ribosomal protein small subunit 4 [Cheilanthes alabamensis] gi|118724481|gb|ABL10814.1| ribosomal protein small subunit 4 [Cheilanthes notholaenoides] Length = 195 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVAGDPSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARITRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVATFVRIPSSLKD 188 SYRCK D+I ++ + +V + +VP++++++ + Sbjct: 120 SYRCKPKDIITIRNRPTSYNAVK-SESFGRDEVPDHLTLSISQTSEPTGLVNHM---ANR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|118724381|gb|ABL10764.1| ribosomal protein small subunit 4 [Pellaea ternifolia] Length = 188 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|51458146|gb|AAU03422.1| ribosomal protein small subunit 4 [Asplenium monanthes] Length = 189 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 8/170 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQK++ YG ++E++ + A +RG T + LE RLD Sbjct: 24 QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARGTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYR K D I V+ ++ + L + Sbjct: 83 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRRKPRDFITVRNRATSCNA-LRSKS 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 L P++++V D R+ + + LV E+YS Sbjct: 142 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVGEYYS 188 >gi|212004179|gb|ACJ15398.1| Rps4 [Pellaea mucronata] gi|212004203|gb|ACJ15410.1| Rps4 [Pellaea truncata] gi|212004205|gb|ACJ15411.1| Rps4 [Pellaea wrightiana] Length = 187 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|307602303|gb|ADN68033.1| ribosomal protein S4 [Juniperus drupacea] Length = 189 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + + S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLRSSKYPVRLKEKQRLRFHYG-LPERQLLQYIRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 LISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|306773458|emb|CBJ55305.1| putative ribosomal protein small subunit 4 [Alsophila salvinii] Length = 163 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 39/199 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R Sbjct: 40 RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRI 99 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 V++ SYRCK D+I V +P+++S + + RI Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDKIPDHLSFSL--LKGLVNRI---AN 141 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 RESIDLNINELLVVEYYSR 160 >gi|118724407|gb|ABL10777.1| ribosomal protein small subunit 4 [Pellaea calomelanos] Length = 195 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 8/196 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+ + Q K S F ++L AKQ+++ YG ++E++ + Sbjct: 3 RLKNLPGLAGKNNAPNLDEARVIGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNY 61 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R+RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I SY Sbjct: 62 VRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSY 121 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190 R K D+I ++ + + +VP++++++ + Sbjct: 122 RRKPKDIITIRNRLTSYTAAK-GKSFGRDEVPDHLTLSISKTSEPTGLVNHM---ANRES 177 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 178 VNLDINELLVVEYHSR 193 >gi|212004161|gb|ACJ15389.1| Rps4 [Pellaea breweri] Length = 187 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|45271098|gb|AAS56932.1| ribosomal protein small subunit 4 [Selliguea triloba] Length = 184 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 17 QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + + Sbjct: 76 VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNASRNKFT 135 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ + + + + LVVE+YSR Sbjct: 136 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 182 >gi|42541366|gb|AAS19534.1| ribosomal protein small subunit 4 [Selliguea laciniata] Length = 179 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 12 QPASRKISQXCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + ++ Sbjct: 71 VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 130 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ + + + + LVVE+YSR Sbjct: 131 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 177 >gi|18027992|gb|AAL55920.1| ribosomal protein S4 [Eriosorus setulosus] Length = 191 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I + + ++ + Sbjct: 83 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + V EFYSR Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVGEFYSR 189 >gi|118724485|gb|ABL10816.1| ribosomal protein small subunit 4 [Cheilanthes parviloba] Length = 193 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+ + Q K S F ++L AKQ+++ YG ++E++ + Sbjct: 1 RLKNLPGLAGKNNSPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNY 59 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R+RG T + LE RLD ++++ TI AARQ VNHRH+LVN R V+I SY Sbjct: 60 VRVARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSY 119 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190 R K D+I ++ + + + L +VP++++++ + + Sbjct: 120 RRKPKDIITIRNRLTSY-NATKIKSLGRDEVPDHLTLSISKTSELTGLVNHM---ANRES 175 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 VNLDINELLVVEYHSR 191 >gi|118724431|gb|ABL10789.1| ribosomal protein small subunit 4 [Aspidotis densa] Length = 186 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 19 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 78 IIFQLGMASTIPAARQLVNHRHILVNHRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE++SR Sbjct: 137 LGRGEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184 >gi|32401898|gb|AAP80937.1| small ribosomal protein 4 [Juniperus sabina] Length = 191 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 10/193 (5%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N R P + K + ++L+ KQ+++ +YG + E++ + A Sbjct: 2 LPGLSKKTPN-RIQKPIKKKHSKPLKSLXYPVRLKEKQRLRFHYG-LPERQLLQYVRIAR 59 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V I SYRCK Sbjct: 60 RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVXIPSYRCKPQ 119 Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPV 193 D I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 120 DFISIKEKQGLRNIMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGL 176 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 177 KINELLVVEYYSR 189 >gi|74273241|gb|ABA01320.1| ribosomal protein S4 [Paropsia braunii] Length = 163 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 6/168 (3%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G KSP + L Q R K S + ++L KQK++ +YG ++E+ Sbjct: 1 GALPGLTSKSPRSR----SDLQTQLRSGKRSQYRIRLEEKQKLRFHYG-LTERLLLKYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC Sbjct: 56 IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115 Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRI 182 K DVI K K + A + + R +P +++++ ++ +I Sbjct: 116 KPRDVITTKDKERSKALIQNSLVSFPPRGLPNHLTIDSLHIKGLVNQI 163 >gi|307602395|gb|ADN68079.1| ribosomal protein S4 [Thuja koraiensis] gi|307602397|gb|ADN68080.1| ribosomal protein S4 [Thuja occidentalis] Length = 189 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + KPS + ++L+ KQK++ +YG + E++ + A R Sbjct: 1 PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPIRLKEKQKLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVI 194 +I +K+K + + + ++E+D VP +++ A +I + + + Sbjct: 119 LISIKEKQGLINIINQNIFISEQDKMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGLN 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|170516237|gb|ACB15120.1| small ribosomal protein 4 [Austrocedrus chilensis] Length = 194 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 11/201 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ L G K N H + KPS + ++L+ KQ+++ +YG + E Sbjct: 1 RLKIINRLKT-LPGLSKKTPNRIEKPRKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LPE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMAFTIPEARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSS 185 V+I SYRCK D+I +K+ KQ + + + VP +++ + +I + Sbjct: 117 VDIPSYRCKPQDLISIKE--KQGLRINKNIKDKIMRVPPHLNRIKKKLQYSGLVNKIIDN 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 175 K---YIGLKINELLVVGYYSR 192 >gi|306773452|emb|CBJ55302.1| putative ribosomal protein small subunit 4 [Alsophila havilandii] gi|306773456|emb|CBJ55304.1| putative ribosomal protein small subunit 4 [Alsophila pachyrrhachis] Length = 163 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R Sbjct: 40 RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRI 99 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187 V++ SYRCK D+I V ++P++++ + + RI Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 RESIDLNINELLVVEYYSR 160 >gi|291533602|emb|CBL06715.1| Ribosomal protein S4 and related proteins [Megamonas hypermegale ART12/1] Length = 125 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 G T NL+ LE R+D +V+R T ARQ V+H H+ VNG+ ++I S K GD Sbjct: 1 MPGVTGENLLGLLERRIDNVVFRLGLASTRRQARQLVSHGHITVNGKRLDIPSALIKVGD 60 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 VI VK+KS+ A E ++ +VP +++ + N+ + R P+ + + + Sbjct: 61 VIGVKEKSRGTALFKEIAESKNALNVPAWLTADIQNLSGSVTRFPNRDE---IDIPVDEQ 117 Query: 199 LVVEFYSR 206 +VE YSR Sbjct: 118 AIVELYSR 125 >gi|118724371|gb|ABL10759.1| ribosomal protein small subunit 4 [Pellaea ovata] Length = 188 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F + L AKQ+++ YG ++E++ + + A ++RG T + LE RLD Sbjct: 21 QSASKKISQFCVGLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + VP++++++ + + + LVVE++SR Sbjct: 139 FGKDQVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|118724471|gb|ABL10809.1| ribosomal protein small subunit 4 [Cheilanthes fendleri] Length = 193 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 8/196 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 RLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKY 59 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I SY Sbjct: 60 VRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSY 119 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190 RCK D+I ++ ++ ++ +VP++++++ + Sbjct: 120 RCKPKDIITIRNRTTSYNAMK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---ANRES 175 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 VNLDINELLVVEYHSR 191 >gi|212004169|gb|ACJ15393.1| Rps4 [Pellaea breweri] Length = 182 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 15 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 74 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 133 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180 >gi|212004201|gb|ACJ15409.1| Rps4 [Pellaea truncata] Length = 185 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 18 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 77 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 136 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 183 >gi|212004191|gb|ACJ15404.1| Rps4 [Pellaea ternifolia] Length = 187 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QSASKKISPFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|32401868|gb|AAP80922.1| small ribosomal protein 4 [Amentotaxus formosana] Length = 182 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 9/177 (5%) Query: 34 PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93 G + KPS + + L+ KQ+++ YG ++E++ + A R+ G T L+ LE Sbjct: 7 SGKKKHSKPPKPSKYPVCLKEKQRLRLNYG-LTERQLLQYVRIAXRANGSTGQVLLQLLE 65 Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK D+I +K + + + Sbjct: 66 MRLDNIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDLISIKDQQRSRNII 125 Query: 154 LEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 + L++RD VP ++++ + +I S + + + LVVE+YS Sbjct: 126 NKNIDLSQRDKIWVPNHLNLLKKKSQYIGLVKKIIDSKR---ISLKINELLVVEYYS 179 >gi|18027940|gb|AAL55894.1| ribosomal protein S4 [Pteris multifida] Length = 191 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN R V+I SYRCK D+I ++ + + Sbjct: 83 IIFRFGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDIITIRNRPTSHNAAK-GES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++++ + + + +V E+YSR Sbjct: 142 PGGGGIPDHLTLSLSKTGEPAGLVNNM---ANRESVDLDINELVVGEYYSR 189 >gi|118724433|gb|ABL10790.1| ribosomal protein small subunit 4 [Astrolepis cochisensis] Length = 192 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 25 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 84 VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 142 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 143 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 190 >gi|212004199|gb|ACJ15408.1| Rps4 [Pellaea truncata] Length = 185 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 18 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 77 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 136 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 183 >gi|51860473|gb|AAU11373.1| ribosomal protein small subunit 4 [Gnetum indicum] Length = 184 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 10/189 (5%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P + R K S L+ KQK++ ++G ++E++ R + + Sbjct: 1 LTSKRPKYQKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTERQLRQYVQITKKV 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I+YR TI ARQ VNHRH+LVN VNI SY+CK DV Sbjct: 57 QGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVVNIPSYQCKPQDV 116 Query: 141 IEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 I +K K + ++ E +P +++++ +I + ++ Sbjct: 117 ITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKIIDRKD---IQLNIKE 173 Query: 198 NLVVEFYSR 206 LV+E+YSR Sbjct: 174 MLVIEYYSR 182 >gi|307602383|gb|ADN68073.1| ribosomal protein S4 [Juniperus thurifera] Length = 189 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 I +K+K + + ++ ++D VP +++ +I + + + Sbjct: 119 FISIKEKQGLRNRMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|118724427|gb|ABL10787.1| ribosomal protein small subunit 4 [Aspidotis californica] Length = 189 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 22 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I+++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 81 IIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 139 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE++SR Sbjct: 140 LGRGEVPDHLTLSISKTNEATGLVNHM---ANRESVNLDINELLVVEYHSR 187 >gi|212004171|gb|ACJ15394.1| Rps4 [Pellaea bridgesii] Length = 187 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F + L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QSASKKISQFCVSLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|45271096|gb|AAS56931.1| ribosomal protein small subunit 4 [Selliguea lanceola] Length = 182 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 15 QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++ T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + ++ Sbjct: 74 IIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 133 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ + + + + LVVE+YSR Sbjct: 134 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 180 >gi|307602323|gb|ADN68043.1| ribosomal protein S4 [Juniperus indica] gi|307602379|gb|ADN68071.1| ribosomal protein S4 [Juniperus squamata] Length = 189 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ + + + + Sbjct: 119 LISIKEKQGLRNRMKKNIEIFQKDQMRVPPHLNRIKQKSQYSGLVKK---RIDNKRIGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|17154588|emb|CAC83975.1| ribosomal protein S4 [Savannosiphon euryphyllus] Length = 175 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 10/183 (5%) Query: 16 GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 G K P G L Q R K S + ++L KQK++ +YG ++E++ Sbjct: 1 GALPRLTSKRP----RSGCDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55 Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 A +++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR +I SY C Sbjct: 56 IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIGDIPSYCC 115 Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193 K D+I K K + A + + + ++P +++++ +I S + Sbjct: 116 KPRDIITTKNKQRSKALIQNFIFSSPHQEELPNHLTIDPLQYKGLVNQIIDSK---WIGL 172 Query: 194 IMQ 196 + Sbjct: 173 KIN 175 >gi|45271066|gb|AAS56921.1| ribosomal protein small subunit 4 [Acrostichum danaeifolium] Length = 197 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 8/196 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+ + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 5 RLNNLPGLAGKNKTSNLGEFKVASDQSASKKISQFCIRLEAKQRLRFNYG-LTERQLLKY 63 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++RG T L+ LE RLD ++++ TI AARQ VNHRH+LVN R +I SY Sbjct: 64 VRIARKTRGSTGQVLLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIXDIPSY 123 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVP 190 R K D+I ++ + + +P++++ + + Sbjct: 124 RRKPTDMITIRNRPTSYNAXKR-ESFGGHKIPDHLTLSLLETGESAGLVNHM---ANRES 179 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 180 VDLNLNELLVVEYYSR 195 >gi|212004167|gb|ACJ15392.1| Rps4 [Pellaea breweri] Length = 187 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 20 QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|212004239|gb|ACJ15428.1| Rps4 [Cheilanthes newberryi] Length = 184 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 17 QSASKKISQFXVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ ++ +V Sbjct: 76 VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVK-GES 134 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 135 FGRDEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 182 >gi|170516211|gb|ACB15107.1| small ribosomal protein 4 [Saxegothaea conspicua] Length = 216 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 45/229 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ +L G K R K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLK-DLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 49 RQLLQYVRIARTAKGPTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGCM 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------- 162 V+I SY CK DV+ +K + + + + L ++ Sbjct: 109 VDIPSYPCKPKDVVTIKDQQRSRNIIDKNMDLPKKHQERSRLISKRIINRKNIIFFLFKK 168 Query: 163 -----DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP +++++ RI S + + + LV+E++SR Sbjct: 169 HEMKHKVPFHLTLDSSQYKGVVNRIIDSTR---IGLNINELLVIEYFSR 214 >gi|212004175|gb|ACJ15396.1| Rps4 [Pellaea lyngholmii] Length = 182 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 15 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 74 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 133 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180 >gi|190361249|gb|ACE76929.1| ribosomal protein small subunit 4 [Didymoglossum hildebrandtii] Length = 152 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 18/165 (10%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 S FG++L KQ+++ YG ++E++ + A R++G T L+ LE RLD IV++ Sbjct: 1 ISQFGVRLETKQRLRFNYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIVFQLG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164 PTI AARQ VNHRH+LV VNI SYRCK D+I L + + + + Sbjct: 60 MAPTIPAARQLVNHRHILVKNCIVNIPSYRCKPKDIIT-----------LSSRESFRKII 108 Query: 165 PEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P +++ + + + + + LVVE+YSR Sbjct: 109 PNHLTLSFLESNRPKGLVNGV---ADRESIDLNINELLVVEYYSR 150 >gi|118724505|gb|ABL10826.1| ribosomal protein small subunit 4 [Notholaena candida] Length = 186 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T L+ LE RLD Sbjct: 19 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVLLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 78 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-GKS 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE++SR Sbjct: 137 LGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184 >gi|184128079|gb|ACC67939.1| ribosomal protein small subunit 4 [Tmesipteris obliqua] Length = 172 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 7/165 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S + ++L AKQ+++ YG ++E++ A ++RG T L+ LE RLD Sbjct: 12 QSTSRKRSQYSIRLEAKQRLRFNYG-LTERQLLKYVYIAKKARGSTGQVLLQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R PTI ARQ VNHRH+LVN V+I SYRCK D+I V+ + + Sbjct: 71 IIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSYRCKPNDIITVRDHKNSQELIKKNMI 130 Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 + ++P +++ + +I + + LV Sbjct: 131 SSIDEIPNHLNLSYLEETKPKGLINQIVDR---ESIGLEINELLV 172 >gi|212004241|gb|ACJ15429.1| Rps4 [Cheilanthes pringlei] Length = 182 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A +RG T + LE RLD Sbjct: 15 QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARITRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ + +V + Sbjct: 74 VIFQLNMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNAVK-SES 132 Query: 159 LAERDVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +VP++++++ + + + LVVE++SR Sbjct: 133 FGKDEVPDHLTLSISQTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180 >gi|23477334|gb|AAN34643.1| ribosomal protein small subunit 4 [Woodwardia prolifera] Length = 179 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T LE RLD Sbjct: 12 QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++R TI AARQ VNHRH+LVN R V++ SYRCK D+I V+ + + L Sbjct: 71 VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRSRPTSYNA-LRGES 129 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + P+++ + RI + + LVVE+ SR Sbjct: 130 PGGGETPDHLIASLSEGXRPTGLVNRI---ANXESVNLNINELLVVEYCSR 177 >gi|298204988|emb|CBI34295.3| unnamed protein product [Vitis vinifera] Length = 132 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 5/137 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSCYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++ L+ LE LD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLNYVHIARKAKWAIGRVLLQLLEMHLDNILFRLGMASTILGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKE 137 +LVNGR V+I SY CK Sbjct: 116 ILVNGRIVDIPSYCCKP 132 >gi|118724385|gb|ABL10766.1| ribosomal protein small subunit 4 [Pellaea wrightiana] Length = 184 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 17 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 76 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 134 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 182 >gi|32401890|gb|AAP80933.1| small ribosomal protein 4 [Thuja plicata] Length = 190 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N R P + KPS + ++L+ KQK++ +YG + E++ + A Sbjct: 1 LPGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQKLRFHYG-LPERQLLQYVRIAR 58 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK Sbjct: 59 RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVHIPSYRCKPQ 118 Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193 D+I +K+K + + + ++E+D VP +++ A +I + + + Sbjct: 119 DLISIKEKQGLINIINQNIFISEQDQMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGL 175 Query: 194 IMQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 NINELLVVEYYSR 188 >gi|125662700|gb|ABN50300.1| small ribosomal protein 4 [Cunninghamia lanceolata var. konishii] Length = 197 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 11/201 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I R+ K+P + + KPS + ++L+ KQK++ +YG ++E++ Sbjct: 1 IIHRLKTLPGLSKKTPNRIKQPS--KKKHSKPPKPSKYPVRLKEKQKLRFHYG-LTERQL 57 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I Sbjct: 58 LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRLVDI 117 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAE---RDVPEYISVNHDN--MVATFVRIPSS 185 SYRCK D+I +K K + + + ++ + R VP ++++ + +I S Sbjct: 118 PSYRCKPQDLISIKDKQRLRNLIYKNREIFQKEKRRVPPHLNLIKKKSQYIGLVKKIIDS 177 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 NR---ISLKINELLVVEYYSR 195 >gi|118724479|gb|ABL10813.1| ribosomal protein small subunit 4 [Cheilanthes multifida] Length = 188 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 8/170 (4%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD + Sbjct: 22 STSKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDNV 80 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 +++ TI AARQ VNHRH+LVN R V+I SYRCK D+I ++ + + + Sbjct: 81 IFQLNMASTIPAARQLVNHRHILVNRRIVDIPSYRCKPKDIITIRNRLTSYNAAK-GKSI 139 Query: 160 AERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + + LVVE++SR Sbjct: 140 GRDEVPDHLTLSISKTSELTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|118724475|gb|ABL10811.1| ribosomal protein small subunit 4 [Cheilanthes lanosa] Length = 195 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLKNLPGLAGKDNASNLGEFRVTGDQLASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 60 KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188 SYR K D+I ++ ++ ++ + +VP++++++ + Sbjct: 120 SYRRKPKDIITIRNRTTS-SNAAKGESFGRDEVPDHLTLSFSKTSEPTGLVNHM---ASR 175 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 ESVNLDINELLVVEYHSR 193 >gi|212004243|gb|ACJ15430.1| Rps4 [Cheilanthes sieberi] Length = 188 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 2/168 (1%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 21 QSAXKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 80 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 138 Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 139 FGRDEVPDHLTLSISKTSEPTGSVNHMANRESVNLDINELLVVEYHSR 186 >gi|51458168|gb|AAU03432.1| ribosomal protein small subunit 4 [Asplenium viellardii] Length = 188 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE RLD Sbjct: 23 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + ++ + S Sbjct: 82 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSCNALRKKSL 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + ++ P +++ I + + LV E+YSR Sbjct: 142 VGDKT-PNHLTFALSEGGRPTGLVNCI---ANRESINLNINELLVGEYYSR 188 >gi|307602297|gb|ADN68030.1| ribosomal protein S4 [Juniperus convallium] gi|307602325|gb|ADN68044.1| ribosomal protein S4 [Juniperus komarovii] gi|307602345|gb|ADN68054.1| ribosomal protein S4 [Juniperus pingii] gi|307602353|gb|ADN68058.1| ribosomal protein S4 [Juniperus przewalskii] gi|307602357|gb|ADN68060.1| ribosomal protein S4 [Juniperus coxii] gi|307602371|gb|ADN68067.1| ribosomal protein S4 [Juniperus saltuaria] gi|307602385|gb|ADN68074.1| ribosomal protein S4 [Juniperus tibetica] Length = 189 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 +I +K+K + + ++ ++D VP +++ + + + + Sbjct: 119 LISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKK---RIDNKRIGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|18028020|gb|AAL55934.1| ribosomal protein S4 [Jamesonia cinnamomea] Length = 190 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L KQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 23 QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++R TI AARQ VNHRH+LVN V+I SYRC D+I ++ + ++ + Sbjct: 82 ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITIRNRP-IFHNMTKGES 140 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +P++++++ + + + V EFYSR Sbjct: 141 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVGEFYSR 188 >gi|118724395|gb|ABL10771.1| ribosomal protein small subunit 4 [Paragymnopteris bipinnata] Length = 186 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 19 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR D+I ++ + +V Sbjct: 78 VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAVKV-ES 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 137 FVRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184 >gi|190361241|gb|ACE76925.1| ribosomal protein small subunit 4 [Trichomanes crispum] Length = 167 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S FG++L AKQ+++ YG E++ + A +++G T L+ LE RLD IV+R Sbjct: 14 RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHR VLVN V+I SYRCK+ D+I ++ + + + + Sbjct: 73 LGMAPTIPAARQLVNHRRVLVNNHIVDIPSYRCKDKDLITLR-----------SQESSRK 121 Query: 163 DVPEYISVNHD---NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++ + + N I + + LVVE+YSR Sbjct: 122 RIPDHLKFSSEEGNNPKGLVNGI---ANRESIDLNINELLVVEYYSR 165 >gi|170516213|gb|ACB15108.1| small ribosomal protein 4 [Widdringtonia nodiflora] Length = 194 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 11/201 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ L G K N H + RK PS + ++L+ KQ+++ +Y + E Sbjct: 1 RLKIINRLKT-LPGLSKKTPNRIEKPKKKHFKPRK--PSKYPVRLKEKQRLRFHY-RLPE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSS 185 V+I SYRCK D I +K+ KQ + + VP +++ + +I + Sbjct: 117 VDIPSYRCKPQDFISIKE--KQGLRITKNINNKIMRVPPHLNRIKKKLQYSGLVKKIIDN 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 175 K---YIGLKINELLVVGYYSR 192 >gi|66352022|gb|AAY44744.1| ribosomal protein system 4 [Splachnum pensylvanicum] Length = 173 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 5/174 (2%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G L G + +S +K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RRLGA-LPGLTNKTLQLKSSPINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I S Sbjct: 57 YVRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 YRCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 YRCKPQDFITIKNRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDR 170 >gi|25986663|gb|AAN52768.1| ribosomal protein small subunit 4 [Selliguea enervis] Length = 189 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 8/166 (4%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD +++ Sbjct: 27 KISQFCVRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDNVIFHL 85 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + ++ ++ Sbjct: 86 GIASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFTGGDKT 145 Query: 164 VPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+++++ + + + + LVVE+YSR Sbjct: 146 -PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 187 >gi|107770434|gb|ABF83758.1| small ribosomal protein 4 [Taxus wallichiana var. wallichiana] Length = 197 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + KI R+ K P R P + KPS + ++L+ KQ+++ +YG Sbjct: 2 YRGPRLKIVNRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRFHYG 59 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++E++ + A RS+G T L+ LE RLD I++R TI ARQ V+HRH+LV Sbjct: 60 -LTERQLLQYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRHILV 118 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVAT 178 N R V+I SYRCK D+I +K + + + + L++RD VP ++++ + Sbjct: 119 NDRIVDIPSYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQYIGL 178 Query: 179 FVRIPSSLKDVPYPVIMQP 197 +I S + + + Sbjct: 179 VKKIIDSKR---ISLKINE 194 >gi|118724401|gb|ABL10774.1| ribosomal protein small subunit 4 [Paragymnopteris marantae] Length = 191 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 83 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 142 FGRDEVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189 >gi|212004227|gb|ACJ15422.1| Rps4 [Astrolepis cochisensis] gi|212004231|gb|ACJ15424.1| Rps4 [Astrolepis integerrima] Length = 180 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 13 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 72 VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 130 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 131 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178 >gi|190361245|gb|ACE76927.1| ribosomal protein small subunit 4 [Abrodictyum elongatum] Length = 167 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD IV++ Sbjct: 14 RKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQ 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRH+LVN V+I SYRCK D+I ++ + + + + Sbjct: 73 LGMAPTIPAARQLVNHRHILVNNNIVDIPSYRCKPKDLITLR-----------SRESSRK 121 Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++ ++ + I + + LVVE+YSR Sbjct: 122 KIPDHLMLSSSEGNRLTGLVNEI---ANRESIELNINELLVVEYYSR 165 >gi|212004183|gb|ACJ15400.1| Rps4 [Pellaea sp. UC 1795070] Length = 180 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 13 QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 72 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 130 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 131 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178 >gi|212004159|gb|ACJ15388.1| Rps4 [Pellaea brachyptera] Length = 186 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 19 QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 78 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 137 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184 >gi|307602355|gb|ADN68059.1| ribosomal protein S4 [Juniperus pseudosabina] Length = 189 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 10/192 (5%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 G K N R P + K S + ++L+ KQ+++ +YG + E++ + A R Sbjct: 1 PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRCK D Sbjct: 59 AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118 Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194 I +K+K + + ++ ++D VP +++ + + + + Sbjct: 119 FISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKKIDNKR---IGLK 175 Query: 195 MQPNLVVEFYSR 206 + LVVE+YSR Sbjct: 176 INELLVVEYYSR 187 >gi|212004207|gb|ACJ15412.1| Rps4 [Pellaea wrightiana] Length = 185 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 18 QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 76 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 77 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 135 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 136 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 183 >gi|212004195|gb|ACJ15406.1| Rps4 [Pellaea ternifolia] Length = 181 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 14 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 72 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 73 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 131 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 132 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 179 >gi|118724491|gb|ABL10819.1| ribosomal protein small subunit 4 [Cheilanthes viridis var. glauca] Length = 188 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 80 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP+Y++++ + + + LVVE++SR Sbjct: 139 FGRDEVPDYLTLSLSKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|212004153|gb|ACJ15385.1| Rps4 [Pellaea andromedifolia] Length = 184 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 17 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYRCK D+I ++ + + Sbjct: 76 VIFQLGIASTIPAARQLVNHRHILVNRRIVDIPSYRCKPKDIITIRNRPTSYNAAKV-ES 134 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 182 >gi|118724347|gb|ABL10747.1| ribosomal protein small subunit 4 [Pellaea intermedia] Length = 182 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 15 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 74 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + VP++++++ + + + LVVE++SR Sbjct: 133 FGKDQVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180 >gi|212004197|gb|ACJ15407.1| Rps4 [Pellaea truncata] Length = 186 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 19 QSASKKISQXCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 78 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 137 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184 >gi|32401888|gb|AAP80932.1| small ribosomal protein 4 [Fitzroya cupressoides] Length = 193 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 I R+ L G K N H + KPS + ++L+ KQ+++ +YG + E++ Sbjct: 3 IINRLKT-LPGLSKKTPNRIEKPKKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LPERQL 58 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I Sbjct: 59 LQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDI 118 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSSLKD 188 SYRCK D+I +K+ KQ + + VP +++ + +I + Sbjct: 119 PSYRCKPQDLISIKE--KQGLRINQNINNKIIRVPPHLNRIKKKLQYSGLVKKIIDNK-- 174 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 175 -YIGLKINELLVVEYYSR 191 >gi|118724511|gb|ABL10829.1| ribosomal protein small subunit 4 [Bommeria hispida] Length = 180 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 13 QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 71 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRHVLVN R V+I SYR K D+I ++ + + Sbjct: 72 VIFQLGMASTIPAARQLVSHRHVLVNRRIVDIPSYRRKPNDIITIRNRPTSYNAAK-GES 130 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE++SR Sbjct: 131 LGRDEVPDHLTLSISKTTEPTGLVNHM---ANRESVKLDINELLVVEYHSR 178 >gi|306773454|emb|CBJ55303.1| putative ribosomal protein small subunit 4 [Alsophila imrayana] Length = 162 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 LKVIRRLKNLPGLTRK--------------------MSQFCVRLEAKQRLRFNYG-LTER 39 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V Sbjct: 40 XLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIV 99 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 ++ SYRCK D+I V ++P++++ + + RI Sbjct: 100 DVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANR 141 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 ESIDLNINELLVVEYYSR 159 >gi|118724423|gb|ABL10785.1| ribosomal protein small subunit 4 [Argyrochosma limitanea] Length = 180 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 8/175 (4%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLES 94 G Q K S F ++L AKQ+++ YG ++E++ + A R+RG T L+ LE Sbjct: 9 GXGDQSVSKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVLLQLLEM 67 Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + ++ Sbjct: 68 RLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAMK 127 Query: 155 EASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L + +VP++++++ + + + LVVE++SR Sbjct: 128 -GESLGKDEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178 >gi|118724403|gb|ABL10775.1| ribosomal protein small subunit 4 [Paragymnopteris sargentii] Length = 182 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 15 QSPSKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 74 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 133 FGRDEVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180 >gi|212004223|gb|ACJ15420.1| Rps4 [Paragymnopteris vestita] Length = 187 Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR D+I ++ + + Sbjct: 79 VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAAKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP +++++ + + + LVVE++SR Sbjct: 138 FGRDEVPNHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|42794664|gb|AAS45729.1| Rps4 [Macleania insignis] Length = 142 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 7/147 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K + ++L+ KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKXXXQYHIRLQEKQKL 56 Query: 59 KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNH Sbjct: 57 RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 RHVLVNGR ++I SYRCK D+I ++ Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE 142 >gi|118724321|gb|ABL10734.1| ribosomal protein small subunit 4 [Pellaea brachyptera] Length = 195 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 8/197 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 2 RRLKNLPGLAGKDNASNLGEFLVAGDQSASKKISQFCVRLXAKQRLRLNYG-LTERQLLK 60 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++RG T + LE RLD ++++ TI AARQ NHRH+LVN R V+I S Sbjct: 61 YIRIARKTRGSTGQVPLQLLEMRLDNVIFQXGMASTIPAARQLXNHRHILVNRRIVDIPS 120 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDV 189 YR K D+I ++ + +V +VP++++++ + Sbjct: 121 YRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANRE 176 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 177 SVNLDINELLVVEYHSR 193 >gi|212004237|gb|ACJ15427.1| Rps4 [Cheilanthes feei] Length = 183 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 16 QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ ++ +V Sbjct: 75 VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRTTSYNAVK-GES 133 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 134 FGRDEVPDHLTLSFSKTSEPTGLVNHM---ASRESVNLDINELLVVEYHSR 181 >gi|118724443|gb|ABL10795.1| ribosomal protein small subunit 4 [Astrolepis sinuata] Length = 193 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 8/196 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K + Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 RLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKY 59 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I SY Sbjct: 60 VRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSY 119 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190 R K D+I ++ + +V L +VP++++++ + Sbjct: 120 RRKPKDIITIRNRPTSYNAVKV-ESLERDEVPDHLTLSISKTNEPTGLVNHM---ANRES 175 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 176 VNLDINELLVVEYHSR 191 >gi|16565361|gb|AAL26199.1|AF313592_1 small ribosomal protein 4 [Isoetes engelmannii] Length = 190 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 8/195 (4%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K+ + ++ K S + ++L KQK++ +YG ++E++ Sbjct: 1 RRLPRLPGPTQKTH---KKKPDFINRSTSSKKASKYRVRLEEKQKLRFHYG-LTERQLLE 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A ++G T + LE R D I+ PTI ARQ VNH+H+LVN ++NI S Sbjct: 57 YVRIARGAKGSTGQVSLQSLEMRSDNIILGLGMAPTIPGARQMVNHKHILVNSCTINIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 YRCK D+I ++ + K A + + + P + + + + +I Sbjct: 117 YRCKPKDIITMRNRPKSQAMITRNRDSSRKYKKPNHSTFHSSQNIGLVNQIIDR---EWI 173 Query: 192 PVIMQPNLVVEFYSR 206 ++ LVVE++SR Sbjct: 174 DSKIKELLVVEYHSR 188 >gi|306773462|emb|CBJ55307.1| putative ribosomal protein small subunit 4 [Alsophila tricolor] Length = 162 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 LKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTER 39 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V Sbjct: 40 XLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIV 99 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188 ++ SYRCK D+I V+ +P++++ + + RI Sbjct: 100 DVPSYRCKPKDIITVESSRGDQ-------------IPDHLTFSL--LKGLVNRI---ANR 141 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 ESIDLNINELLVVEYYSR 159 >gi|212004235|gb|ACJ15426.1| Rps4 [Cheilanthes bonariensis] Length = 179 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 12 QSXSKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ ++ +V Sbjct: 71 VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVK-GKS 129 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++++ + + + LVVE++SR Sbjct: 130 FGRDEIPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 177 >gi|118724399|gb|ABL10773.1| ribosomal protein small subunit 4 [Paragymnopteris marantae] Length = 182 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 15 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 73 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 74 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 133 FGRDEVPDHLTLSISKANEPTGLVNHM---ANXESVNLDINELLVVEYHSR 180 >gi|212004221|gb|ACJ15419.1| Rps4 [Paragymnopteris marantae] Length = 187 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR D+I ++ + + Sbjct: 79 VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAAKV-ES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP +++++ + + + LVVE++SR Sbjct: 138 FGRDEVPNHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|118724503|gb|ABL10825.1| ribosomal protein small subunit 4 [Notholaena californica] Length = 191 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + + Sbjct: 83 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAAK-GKS 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++P++++++ + + + LVVE++SR Sbjct: 142 LGRDEIPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189 >gi|32401856|gb|AAP80916.1| small ribosomal protein 4 [Prumnopitys taxifolia] Length = 212 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 45/225 (20%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ +L G K R K K S + ++L KQK++ +YG +++++ Sbjct: 1 IRRLK-DLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTDRQLL 48 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I Sbjct: 49 QYVRIARTAKGPTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGCMVDIP 108 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER----------------------------- 162 SY CK DV+ +K + + + + L ++ Sbjct: 109 SYPCKPKDVVTIKDQQRSRNIIDKNMDLPKKHQERSRSSLRGSLIGKIXIFFLFKKHEMK 168 Query: 163 -DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP +++++ RI S + + + LV+E++SR Sbjct: 169 HKVPFHLTLDSSQYKGVVNRIIDSTR---IGLNINELLVIEYFSR 210 >gi|118724445|gb|ABL10796.1| ribosomal protein small subunit 4 [Pellaea gleichenioides] Length = 188 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A ++RG T + LE RLD Sbjct: 21 QSASKKISQFCVRLEAKQRLRINYG-LTERQLLNYVRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 80 VIFQLGMASTIPAARQLVNHRHILVNCRIVDIPSYRRKPKDIITIRNRLTSYNAAKGKF- 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L +VP++++++ + + + LVVE++SR Sbjct: 139 LGRAEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|32401884|gb|AAP80930.1| small ribosomal protein 4 [Athrotaxis selaginoides] Length = 200 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R+ K+P ++ P + +PS + ++L+ KQ+++ +YG +++++ Sbjct: 1 INRLKTLPGLSKKTP--NKNEEPSKKKHSKPPRPSKYPVRLKEKQRLRFHYG-LTDRQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A ++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I Sbjct: 58 KYVRIARXAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEY------ISVNHDNMVATFVRI 182 SYRCK D I +K K + + + + + ++D VP + + +I Sbjct: 118 SYRCKPQDFISIKDKQRLINRINQNIDIFQKDKMRVPSHLNLKKNKKKSLYKYXGLVKKI 177 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + LVVE+YSR Sbjct: 178 IDNXR---IGLKINELLVVEYYSR 198 >gi|212004173|gb|ACJ15395.1| Rps4 [Pellaea intermedia] Length = 179 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 12 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 71 VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 129 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + VP++++++ + + + LVVE++SR Sbjct: 130 FGKDQVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 177 >gi|118724483|gb|ABL10815.1| ribosomal protein small subunit 4 [Cheilanthes parryi] Length = 195 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 10/199 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 RR+ NL GR + + G Q K S F ++L AKQ+++ YG ++E++ Sbjct: 1 MRRLK-NLPGRAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQL 58 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V+I Sbjct: 59 LKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDI 118 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLK 187 SYR K D+I ++ ++ +V +VP++++++ + Sbjct: 119 PSYRRKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---AS 174 Query: 188 DVPYPVIMQPNLVVEFYSR 206 + + LVVE++SR Sbjct: 175 RESVNLDINELLVVEYHSR 193 >gi|225549562|ref|ZP_03770528.1| ribosomal protein S4 [Borrelia burgdorferi 118a] gi|225369839|gb|EEG99286.1| ribosomal protein S4 [Borrelia burgdorferi 118a] Length = 147 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 6/149 (4%) Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE++ + FKEA + G T NL+S LE R+D +VYRA F + ARQ V+H Sbjct: 1 FTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSHG 59 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMVA 177 +++NGR V I S + D I++K+K + + + R++P +I VN D++ Sbjct: 60 IIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLNI 119 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 PS + P + +VVE+YS+ Sbjct: 120 KVKHAPSRDE---IPTLANEQMVVEYYSK 145 >gi|32401870|gb|AAP80923.1| small ribosomal protein 4 [Sequoia sempervirens] Length = 170 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 9/162 (5%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++L+ KQ+++ +YG ++E++ + A R++G T L+ LE RLD I++R +I Sbjct: 11 VRLKEKQRLRFHYG-LAERQLLQYVRIAKRAKGSTGQVLLQLLEMRLDNILFRLGMALSI 69 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPE 166 ARQ VNHRH+LVN R V+I SYRCK D I +K K + + + ++D VP Sbjct: 70 PEARQLVNHRHILVNDRIVDIPSYRCKPQDFISIKDKQRLRNIINKNIDNFKKDKMRVPP 129 Query: 167 YISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + +I + + + + LVVE+YSR Sbjct: 130 HLKLIKKKTQYSGLVHKIIDNSR---IGLKINELLVVEYYSR 168 >gi|212004193|gb|ACJ15405.1| Rps4 [Pellaea ternifolia] Length = 186 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 19 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 78 VIFQLGMTSTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 137 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184 >gi|306773470|emb|CBJ55311.1| putative ribosomal protein small subunit 4 [Cyathea poeppigii] gi|306773480|emb|CBJ55316.1| putative ribosomal protein small subunit 4 [Sphaeropteris glauca] gi|306773488|emb|CBJ55320.1| putative ribosomal protein small subunit 4 [Sphaeropteris robusta] Length = 160 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V++ Sbjct: 40 LRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDV 99 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I V ++P++++ + + RI Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRES 141 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 IDLNINELLVVEYYSR 157 >gi|16930550|gb|AAL31956.1| ribosomal protein small subunit 4 [Onoclea sensibilis] Length = 191 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 24 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVPLQPLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN R V+I SYRCK D+I V+ + + L Sbjct: 83 VIFHLGMASTIPAARQLVNHRHILVNSRVVDIPSYRCKPRDIITVRNRPTSCNA-LRGES 141 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++ D R+ + + LVVE+Y R Sbjct: 142 LGGDKTPDHLTASISEGDRPTGLVNRV---ASRESVNLNINELLVVEYYPR 189 >gi|290467479|gb|ADD25857.1| small ribosomal protein 4 [Hymenophyllum plicatum] Length = 186 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +E+ + A +++G T L+ LE RLD Sbjct: 17 QSSSKKVSQFCVRLEAKQRLRFNYGS-TERPLLKYVRVARKTKGSTGQVLLPLLEMRLDN 75 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 IV++ TI AARQ VNHR +LVN V+I SYRCK D+I ++ +S + + + Sbjct: 76 IVFQLGMSTTIPAARQLVNHRPILVNNNIVDIPSYRCKPKDLITLRNRSSSYSGSNKNIE 135 Query: 159 LAE-RDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +P++++ + I + + LVVE+YSR Sbjct: 136 FSRIKKIPDHLTFSFSEGNIPKGLVNGI---ANRESINLNINELLVVEYYSR 184 >gi|118724501|gb|ABL10824.1| ribosomal protein small subunit 4 [Notholaena affinis] Length = 192 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 25 QSVSKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 83 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ V+HRH+LVN V+I SYR K D+I ++ + + Sbjct: 84 VIFQLGLASTIPAARQLVSHRHILVNRHIVDIPSYRRKPKDIITIRNRPTSYNAAK-GKS 142 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L ++P++++++ + + + LVVE++SR Sbjct: 143 LGRDEIPDHLTLSISKTNETTGLVNHM---ANRESVNLDINELLVVEYHSR 190 >gi|16565363|gb|AAL26200.1|AF313593_1 small ribosomal protein 4 [Tmesipteris obliqua] Length = 234 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 51/239 (21%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHG----------------------------- 38 + KI RR+ +L G K + T Sbjct: 1 RLKIIRRLN-SLPGLTKKKLKTDRVESNQSKDESNQSKDESNQSKVKSNQSKVKSNQSKM 59 Query: 39 --------------QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 Q K S + ++L AKQ+++ YG ++E++ A ++RG T Sbjct: 60 ESNQSKAESDQSIFQSTSRKRSQYSIRLEAKQRLRFNYG-LTERQLLKYVYIAKKARGST 118 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L+ LE RLD I++R PTI ARQ VNHRH+LVN V+I SYRCK D+I V+ Sbjct: 119 GQVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSYRCKPNDIITVR 178 Query: 145 QKSKQLASVLEASQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 + + + ++P +++ + +I + + LV Sbjct: 179 DHKNSQELIKKNMISSIDEIPNHLNLSYLEETKPKGLINQIVDR---ESIGLEINELLV 234 >gi|212004217|gb|ACJ15417.1| Rps4 [Paragymnopteris marantae] Length = 189 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 22 QPASKKISPFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 80 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 81 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 139 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 140 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 187 >gi|99639980|emb|CAJ45133.1| putative ribosomal protein S4 gene [Culcita macrocarpa] Length = 171 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 10/173 (5%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E+ R + A +++G T + LE RLD Sbjct: 2 QSASRKISQFCVRLEAKQRLRFNYG-LTERLLR-YVRIARKTKGSTGQVPLQLLEMRLDN 59 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 I++ + TI AARQ VNHRH+LVN R V+I SYRCK D+I V+ + Sbjct: 60 IIFHSGMTSTIPAARQLVNHRHILVNDRIVDIPSYRCKPKDIITVRDRPTSCNGPRSGIN 119 Query: 159 LAER--DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + R P+++++ + RI + + +LVVE+YSR Sbjct: 120 ESSRGDKTPDHLTLSLSEDNRPKGLVNRI---ANRESIELNINESLVVEYYSR 169 >gi|212004211|gb|ACJ15414.1| Rps4 [Paragymnopteris marantae] Length = 188 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 21 QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 80 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 138 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 139 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186 >gi|59803318|gb|AAX07767.1| Rps4 [Symphyogyna brongniartii] Length = 153 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 KQK +YG ++E++ + A ++G T L+ LE RLD IV+R PTI A Sbjct: 1 EEKQKXXFHYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTISGA 59 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVN 171 RQ VNHRH+++N +++I SY CK DVI ++ + + + + + L ER +P +++ + Sbjct: 60 RQLVNHRHIIINDDTIDIPSYNCKPQDVITIRDRRESQSVITQNISLFRERRIPNHLTFD 119 Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + +I + + LVVE+YSR Sbjct: 120 STRFCGSVNQIIDR---EWIGLKINELLVVEYYSR 151 >gi|212004219|gb|ACJ15418.1| Rps4 [Paragymnopteris marantae] Length = 186 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 19 QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 77 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 78 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 136 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 137 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184 >gi|309798830|ref|ZP_07693093.1| 30S ribosomal protein S4 [Streptococcus infantis SK1302] gi|308117556|gb|EFO54969.1| 30S ribosomal protein S4 [Streptococcus infantis SK1302] Length = 133 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 4/122 (3%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 N + LE RLD +VYR T ARQFVNH H+LV+G+ V+I SYR G VI V+ Sbjct: 14 GFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVR 73 Query: 145 QKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +KS ++ ++LEA + A P ++S + + + + R+P + + LVVEFY Sbjct: 74 EKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSLTRLPERDE---INPEINEALVVEFY 129 Query: 205 SR 206 ++ Sbjct: 130 NK 131 >gi|25986665|gb|AAN52769.1| ribosomal protein small subunit 4 [Gymnogrammitis dareiformis] Length = 181 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 8/172 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 12 QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 70 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-LASVLEAS 157 +++ T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + A L Sbjct: 71 VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALTLRNK 130 Query: 158 QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P+++++ + + + + +VVE+YSR Sbjct: 131 FTGGDKTPDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELVVVEYYSR 179 >gi|212004215|gb|ACJ15416.1| Rps4 [Paragymnopteris marantae] Length = 187 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 138 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|306773468|emb|CBJ55310.1| putative ribosomal protein small subunit 4 [Cyathea multiflora] Length = 160 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V++ Sbjct: 40 LRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDV 99 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I V ++P++++ + + RI Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVDRI---ANRES 141 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 IDLNINELLVVEYYSR 157 >gi|306773476|emb|CBJ55314.1| putative ribosomal protein small subunit 4 [Sphaeropteris capitata] Length = 151 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 19/164 (11%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG ++E+ + A +++G T + LE RLD I++ Sbjct: 4 RKISQFCVRLEAKQRLRFNYG-LTERXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFH 62 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + TI AARQ VNHRH+LVN R V++ SYRCK D+I V Sbjct: 63 SGMASTIPAARQLVNHRHILVNDRIVDVPSYRCKPKDIITV-------------ESSRGD 109 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++ + + RI + + LVVE+YSR Sbjct: 110 EIPDHLTFSL--LEGLVNRI---ANRESINLNINELLVVEYYSR 148 >gi|212004213|gb|ACJ15415.1| Rps4 [Paragymnopteris marantae] Length = 187 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 138 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|32401872|gb|AAP80924.1| small ribosomal protein 4 [Sequoiadendron giganteum] Length = 196 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R+ K+P RS P + KPS + ++L+ KQ+++ +YG ++E++ Sbjct: 1 INRLKTLPGLSKKTP--NRSEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RLD I++R +I ARQ VNHRH+L N R V+I Sbjct: 58 QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALSIPEARQLVNHRHILXNNRIVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSL 186 SYRCK D I +K K + + ++D VP ++++ +I + Sbjct: 118 SYRCKPQDFISIKDKQRLRNIININIDNFQKDKMRVPPHLNLIKKKSQYSGLVKKIIDNS 177 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + + LVVE+YSR Sbjct: 178 R---IGLKINELLVVEYYSR 194 >gi|306773482|emb|CBJ55317.1| putative ribosomal protein small subunit 4 [Sphaeropteris horrida] Length = 159 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 39/195 (20%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 IRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXLL 39 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V++ Sbjct: 40 RYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDVP 99 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SYRCK D+I V ++P++++ + + RI Sbjct: 100 SYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRESI 141 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 DLNINELLVVEYYSR 156 >gi|170516233|gb|ACB15118.1| small ribosomal protein 4 [Acmopyle pancheri] Length = 222 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 45/232 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ NL G K R K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLK-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR Sbjct: 49 RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRM 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------- 162 V+I SYRC DVI +K + + + + L+++ Sbjct: 109 VDIPSYRCNPKDVITIKDQKRSRNIINKNIDLSKKHKERSRLISKRIINQKMILFFRFKK 168 Query: 163 -----DVPEYISVNHDNMVATFVR---IPSSLKDVPYPVIMQPNLVVEFYSR 206 VP +++++ + + + + LV+E++SR Sbjct: 169 HFMKHKVPFHLTLDSSQYKGVVKYKGVVNRIIDSTGIGLNINELLVIEYFSR 220 >gi|322517735|ref|ZP_08070593.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124] gi|322123628|gb|EFX95225.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124] Length = 166 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 3/120 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 45 MSRYTGPSWKQARRLGFSLTGTGKE-LARRNYIPGQHGPNNRSKLSEYGLQLAEKQKLRF 103 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + EK+FR++F +A + +G T NL+ LE RLD +VYR T ARQFVNH Sbjct: 104 TYG-VGEKQFRNLFVQATKVKGGTLGFNLMLLLERRLDNVVYRLGLATTRHQARQFVNHG 162 >gi|118724397|gb|ABL10772.1| ribosomal protein small subunit 4 [Paragymnopteris marantae] Length = 190 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 8/166 (4%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD ++++ Sbjct: 28 KISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDNVIFQL 86 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 87 GMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IESFGRDQ 145 Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 146 VPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 188 >gi|42794646|gb|AAS45720.1| Rps4 [Diogenesia racemosa] Length = 211 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 11/166 (6%) Query: 48 FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107 + L+ KQK++ + G ++E++ + A +++G L+ LE LD I++R Sbjct: 46 YHXCLQKKQKLRFHNG-LTERQLLKYVRIAGKAKGSPGQVLLQLLEMGLDNILFRLGMAS 104 Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-- 163 TI ARQ VNHRHVLVNGR ++I SYRCK D+I ++KS+ S L R Sbjct: 105 TIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKGK 164 Query: 164 ---VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP ++++N +I ++ + ++ LVVE+YSR Sbjct: 165 RKRVPYHLTLNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207 >gi|212004209|gb|ACJ15413.1| Rps4 [Paragymnopteris marantae] Length = 187 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 20 QPXLKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 78 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ V TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + +V Sbjct: 79 VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 137 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 138 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185 >gi|117306746|emb|CAH73341.1| ribosomal protein S4 [Lepyrodon tomentosus] Length = 177 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 8/184 (4%) Query: 20 WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79 K+P S ++ K S + ++L KQK++ +YG I+E++ + + A R Sbjct: 1 GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRTARR 56 Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++G T L+ E RLD +++R PTI ARQ VNHRH+LVN V+I SYRCK D Sbjct: 57 AKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQD 116 Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 I +K + K A + + + ++ +P +++ + +I L + + Sbjct: 117 FITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKIXXX 173 Query: 199 LVVE 202 VVE Sbjct: 174 XVVE 177 >gi|190361235|gb|ACE76922.1| ribosomal protein small subunit 4 [Crepidomanes bipunctatum] Length = 167 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 18/166 (10%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S F ++L AKQ+++ YG +E++ + A R++G T L+ LE RLD IV+ Sbjct: 15 KVSQFRVRLEAKQRLRFNYGS-TERQLLRYVRIARRAKGSTGQVLLQLLEMRLDNIVFNL 73 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 + PTI AARQ VNHRH+LVN R V+I SYRCK D+I +K + E+ Sbjct: 74 RMAPTIRAARQLVNHRHILVNNRLVDIPSYRCKPKDLITLK-----------NREFLEKK 122 Query: 164 VPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP+++++ I + + + LVVE+YSR Sbjct: 123 VPDHLALSFSESKEPKGLVNGIVNR---ESIDLNINELLVVEYYSR 165 >gi|15145826|gb|AAK83531.1| rps4 [Splachnum pensylvanicum] Length = 172 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 5/173 (2%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G L G + +S +K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGA-LPGLTNKTLQLKSSPINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A ++G T L+ LE RLD I++R PTI ARQ VNHRH+LVN R V+I SY Sbjct: 57 VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185 RCK D I +K + K + + + ++ +P ++ N +I Sbjct: 117 RCKPQDFITIKNRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDR 169 >gi|118724477|gb|ABL10812.1| ribosomal protein small subunit 4 [Cheilanthes lendigera] Length = 181 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 11/166 (6%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD ++++ Sbjct: 22 KISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQL 80 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 TI AARQ V+HRH+LVN R V+I SYRCK D+I ++ ++ A + + Sbjct: 81 NMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSY----NAVKGGRDE 136 Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ + + + LVVE++SR Sbjct: 137 VPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 179 >gi|306773486|emb|CBJ55319.1| putative ribosomal protein small subunit 4 [Sphaeropteris polypoda] Length = 150 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 19/164 (11%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG ++E+ + A +++G T + LE RLD I++ Sbjct: 3 RKISQFCVRLEAKQRLRFNYG-LTERXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFH 61 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + TI AARQ VNHRH+LVN R V++ SYRCK D+I V Sbjct: 62 SGMASTIPAARQLVNHRHILVNDRIVDVPSYRCKPKDIITV-------------ESSRGD 108 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++ + + RI + + LVVE+YSR Sbjct: 109 EIPDHLTFSL--LEGLVNRI---ANRESINLNINELLVVEYYSR 147 >gi|118724493|gb|ABL10820.1| ribosomal protein small subunit 4 [Cheilanthes viridis] Length = 191 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + + A R+RG T + LE RLD Sbjct: 24 QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I SYR K D+I ++ + + Sbjct: 83 VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 141 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP+Y++++ + + + LVVE++SR Sbjct: 142 FGRDEVPDYLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189 >gi|32401878|gb|AAP80927.1| small ribosomal protein 4 [Taxodium distichum] Length = 193 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 10/193 (5%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N R+ P + KPS + ++L+ KQ+++ +YG ++E++ + A Sbjct: 4 LPGLSKKTPN-RTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLLQYVRIAR 61 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R V+I SYRCK Sbjct: 62 RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIPSYRCKPQ 121 Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193 D I +K K + + + ++D VP +++ +I + + + Sbjct: 122 DFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDNNR---IGL 178 Query: 194 IMQPNLVVEFYSR 206 + LV E+YSR Sbjct: 179 KINELLVXEYYSR 191 >gi|16930552|gb|AAL31957.1| ribosomal protein small subunit 4 [Onocleopsis hintonii] Length = 170 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F +L AKQ+++ YG ++E++ + A ++RG T + LE RLD Sbjct: 3 QSASRKISQFCGRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVPLQLLEMRLDN 61 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN R V+I SYRCK D+ + + + L Sbjct: 62 VIFHLGMASTIPAARQLVNHRHILVNSRVVDIPSYRCKPKDITTARNRPTSCNA-LRGES 120 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 L P++++ + R+ + + LVVE+Y R Sbjct: 121 LGGDKTPDHLTASISEGNGPXGLVNRV---ANRESINLNINEXLVVEYYPR 168 >gi|51860523|gb|AAU11398.1| ribosomal protein small subunit 4 [Ephedra viridis] Length = 185 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 14/191 (7%) Query: 22 RPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K P + +H R K S + L+ KQK++ +YG ++E++ R A + Sbjct: 1 TSKRPKYKKR----VHRSSRPWWKKSQCLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNA 55 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD I++R TI ARQ VNHRH+LVN V+I SYRCK D+ Sbjct: 56 QGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDI 115 Query: 141 IEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 I +K K + + + VP Y++ N +I + + + Sbjct: 116 ITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKI 172 Query: 196 QPNLVVEFYSR 206 + LV+E+YSR Sbjct: 173 KEMLVIEYYSR 183 >gi|42541369|gb|AAS19535.1| ribosomal protein small subunit 4 [Selliguea heterocarpa] Length = 189 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q + S F ++L AK +++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 21 NQPVSKRISQFCVRLEAKHRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLD 79 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 +++ T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + ++ + Sbjct: 80 NVIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRKKF 139 Query: 158 QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ P+++++ + + + + LVVE+YSR Sbjct: 140 TGGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 187 >gi|157272419|gb|ABV27024.1| ribosomal protein small subunit 4-like protein [Azolla nilotica] Length = 173 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 10/173 (5%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 K S F ++L AKQK++ YG ++E++ + A +++G T + LE RLD I Sbjct: 3 STPKKISQFCVRLEAKQKLRYNYG-LTERQLLRYVRIARKTKGSTGQVPLQLLEMRLDNI 61 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE---A 156 +Y PTI AARQ VNHRH+LVN R V++ SYRCK D+I V+ + L V Sbjct: 62 IYHLGMSPTIPAARQPVNHRHILVNDRIVDVPSYRCKSKDIITVRNRPTSLNGVKRTGII 121 Query: 157 SQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++ + + + + + VVE+YSR Sbjct: 122 ESSRGSQIPDHLTFSLSEDNRPKGLVNKTATR---ESIDLNINELSVVEYYSR 171 >gi|32401832|gb|AAP80904.1| small ribosomal protein 4 [Ephedra chilensis] Length = 180 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 10/182 (5%) Query: 31 SYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89 Y +H R K S + + L+ KQK++ +YG ++E++ R A ++G T L+ Sbjct: 1 KYKKRVHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLL 59 Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 LE RLD I++R TI ARQ VNHRH+LVN V+I SYRCK D+I +K K + Sbjct: 60 QLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPE 119 Query: 150 LASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 + + VP Y++ N +I + + ++ LV+E+Y Sbjct: 120 RLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEMLVIEYY 176 Query: 205 SR 206 SR Sbjct: 177 SR 178 >gi|170516241|gb|ACB15122.1| small ribosomal protein 4 [Papuacedrus papuana] Length = 198 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ L G K N H + KPS + ++L+ KQ+++ +YG + E Sbjct: 1 RLKIINRLKT-LPGLSKKTPNRIEKTRKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LPE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKS--KQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIP 183 V+I SYRCK D+I +K+K + ++L +++ VP +++ +I Sbjct: 117 VDIPSYRCKPQDLISIKKKQGLRINKNILISTKDNRMRVPPHLNRIKKKFQYSGLVKKII 176 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + + LVV +YSR Sbjct: 177 DNKYR---GLKINELLVVGYYSR 196 >gi|42541371|gb|AAS19536.1| ribosomal protein small subunit 4 [Selliguea subsparsa] Length = 189 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 8/163 (4%) Query: 47 YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD +++ F Sbjct: 30 QFXVRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDNVIFHLGFA 88 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE 166 T+ AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ ++ P+ Sbjct: 89 STVPAARQLVNHRHILVNSYVVDIPSYRCKPKDIITVRNRPTSYNALRNKFTGGDKT-PD 147 Query: 167 YISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++++ + + + + + L VE+YSR Sbjct: 148 HLTISLSEDNKPAGLVNCVVNR---ESVDLNINEMLDVEYYSR 187 >gi|32879553|emb|CAE11887.1| ribosomal protein S4 [Devia xeromorpha] Length = 151 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG ++E++ A +++G T L+ LE RLD I++R Sbjct: 1 KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--E 161 TI ARQ VNHRH+LVNGR V+I SYRCK D+I K + A + + + Sbjct: 60 GMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQ 119 Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 ++P +++++ +I S + + Sbjct: 120 EELPNHLTIDPFQYKGLVNQIIDSK---WIGLKIN 151 >gi|306773484|emb|CBJ55318.1| putative ribosomal protein small subunit 4 [Sphaeropteris megalosora] Length = 148 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 19/164 (11%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG ++E+ + A +++G T + LE RLD I++ Sbjct: 1 RKISQFCVRLEAKQRLRFNYG-LTERXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFH 59 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + TI AARQ VNHRH+LVN R V++ SYRCK D+I V Sbjct: 60 SGMASTIPAARQLVNHRHILVNDRIVDVPSYRCKPKDIITV-------------ESSRGD 106 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++P++++ + + RI + + LVVE+YSR Sbjct: 107 EIPDHLTFSL--LEGLVNRI---ANRESINLNINELLVVEYYSR 145 >gi|190361223|gb|ACE76916.1| ribosomal protein small subunit 4 [Hymenophyllum tunbrigense] Length = 167 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD IV++ Sbjct: 14 RKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIVFQ 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + TI AARQ VNHRH+ VN V+I SYRCK D+I V+ + + Sbjct: 73 SGMSATIPAARQLVNHRHIWVNNHIVDIPSYRCKPKDLITVR-----------NRGFSRK 121 Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P++++ + I + + LVVE+YSR Sbjct: 122 KIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 165 >gi|51458107|gb|AAU03405.1| ribosomal protein small subunit 4 [Asplenium fissum] Length = 180 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 8/170 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 16 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ + S Sbjct: 75 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRDKSL 134 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 + ++ P++++V D R+ + + + VV +YS Sbjct: 135 VGDKT-PDHLTVSLLEGDRPTGXANRVXNR---ESINLTINELXVVGYYS 180 >gi|42794704|gb|AAS45747.1| Rps4 [Symphysia racemosa] Length = 142 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 3/145 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + + K RR+G K P S + K K S + ++L+ KQK++ Sbjct: 1 MXRYRGPRFKKIRRLGALPGLTNKKPKPRNSRRT--QSRXGKKKKSQYHIRLQEKQKLRF 58 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++G T L+ LE RLD I++R TI ARQ VNHRH Sbjct: 59 HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQ 145 VLVNGR ++I SYRCK D+I ++ Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITARK 142 >gi|306773450|emb|CBJ55301.1| putative ribosomal protein small subunit 4 [Cyathea dregei] Length = 160 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V++ Sbjct: 40 LRYVRIARKTKGSTGQVPLQLLEMRLDNILFHSGMTSTIPAARQLVNHRHILVNDRIVDV 99 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I V ++P++++ + + RI Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRES 141 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 IDLNINELLVVEYYSR 157 >gi|56070065|gb|AAV70693.1| ribosomal protein 4 [Gnetum parvifolium] gi|56070067|gb|AAV70694.1| ribosomal protein 4 [Gnetum indicum] gi|56070069|gb|AAV70695.1| ribosomal protein 4 [Gnetum montanum] Length = 160 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 7/156 (4%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L+ KQK++ ++G ++E++ R + + +G T L+ LE RLD I+YR TI Sbjct: 9 LQEKQKIRFHFG-LTERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPG 67 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYI 168 ARQ VNHRH+LVN VNI SY+CK DVI +K K + ++ E +P ++ Sbjct: 68 ARQLVNHRHILVNDHVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHL 127 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +++ +I + ++ LV+E+Y Sbjct: 128 TLDLSQNKGIVNKIIDRKD---IQLNIKEMLVIEYY 160 >gi|37548851|gb|AAO32694.1| ribosomal protein 4 [Pogonatum aloides] Length = 157 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K+P Y ++ K S + ++L KQK++ +YG +E++ Sbjct: 1 RRLGALPGLTXKTPQXKSXY---INRSTSNKKVSQYRIRLEEKQKLRFHYGX-TERQLLX 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+LVN V+I S Sbjct: 57 YVRIARKAKGSTGQVLLQLLEMRLDNXIFRLGMAPTIPGARQLVNHRHILVNDAIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 Y + GD I V+++ A + + + + +P +++ + Sbjct: 117 YXXEPGDFITVRKRXXSQAIIXKNXDXSXKYKIPNHLTFDS 157 >gi|306773460|emb|CBJ55306.1| putative ribosomal protein small subunit 4 [Alsophila stelligera] Length = 160 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V++ Sbjct: 40 LRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIVDV 99 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 SYRCK D+I V ++P++++ + + RI Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRES 141 Query: 191 YPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 IDLNINELLVVEYYSR 157 >gi|157272431|gb|ABV27030.1| ribosomal protein small subunit 4-like protein [Salvinia minima] Length = 169 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S F ++L AKQ+++ YG ++E++ + A +++G T + LE RLD I++ Sbjct: 1 PKKISQFCVRLEAKQRLRYNYG-LTERQLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIF 59 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA---SQ 158 PTI AARQ VNHRH+LVN R V++ SYRCK D I V+ + + S + Sbjct: 60 HLGMAPTIPAARQSVNHRHILVNDRIVDVPSYRCKPRDTITVRNRPTSINSSKRSDIVES 119 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++++ + + + + + VVE+YSR Sbjct: 120 SRGNLIPDHLTLSFSEDNRPKGLVNQTATR---ESIDLNINELSVVEYYSR 167 >gi|306773464|emb|CBJ55308.1| putative ribosomal protein small subunit 4 [Cyathea horrida] Length = 158 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 39/194 (20%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ K S F ++L AKQ+++ YG ++E+ Sbjct: 1 RRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXLLR 39 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V++ S Sbjct: 40 YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDVPS 99 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 YRCK D+I V ++P++++ + + RI Sbjct: 100 YRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVDRI---ANRESID 141 Query: 193 VIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 142 LNINELLVVEYYSR 155 >gi|157689464|gb|ABV65288.1| ribosomal protein S4 [Drypetes roxburghii] Length = 186 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 19/178 (10%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + S + ++L+ KQ+++ +YG ++E++ + + A +++G+ L+ LE RLD I++R Sbjct: 9 RTSEYSIRLKEKQRLRFHYG-LTERQLLTYVRIAAKAKGEKGPVLLQLLEMRLDNILFRL 67 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 TI ARQ VNHRH+LVNGR V+I SYRCK D+I K + K A + R Sbjct: 68 GMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDIITAKDEQKSRAMIQNYLSSYPRK 127 Query: 163 --------------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P+++++ ++ S + + V+E+YSR Sbjct: 128 KASYPRKKDPQKEEKLPKHLTLYPLEYKGLVNQVIDSD---CVGLKINQLRVIEYYSR 182 >gi|170516243|gb|ACB15123.1| small ribosomal protein 4 [Pilgerodendron uviferum] Length = 194 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 11/201 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ +L G K N H + KPS + ++L+ KQ+++ +YG ++E Sbjct: 1 RLKIINRLK-SLPGLSKKTPNIIEKTRKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LAE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVN R Sbjct: 57 RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV--ATFVRIPSS 185 V+I SYRCK D+I +K KQ + + + VP +++ + +I + Sbjct: 117 VDIPSYRCKPQDLISIKD--KQGLRINQNIKDKIMRVPPHLNRIKKKLQYNGLVKKIIDN 174 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 175 K---YLGLKINELLVVGYYSR 192 >gi|190361267|gb|ACE76938.1| ribosomal protein small subunit 4 [Crepidomanes thysanostomum] Length = 167 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 18/166 (10%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S F ++L AKQ+++ YG +E++ + A R++G T L+ L+ RLD IV+ Sbjct: 15 KVSQFRVRLEAKQRLRFNYGS-TERQLLRYVRIARRAKGSTGQILLQLLQMRLDNIVFNL 73 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 + PTI AARQ VNHRH+LVN R V+I SYRCK D+I +K + E+ Sbjct: 74 QMAPTIRAARQLVNHRHILVNNRVVDIPSYRCKPKDIITLK-----------NREFLEKK 122 Query: 164 VPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP+++++ ++ I + + L+VE+YSR Sbjct: 123 VPDHLTLSFSENNRPKGLVNGI---ASRESIDLKINELLIVEYYSR 165 >gi|32401850|gb|AAP80913.1| small ribosomal protein 4 [Lepidothamnus intermedius] Length = 206 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 34/197 (17%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K K S + ++L KQK++ +YG +++++ + A R++G T L+ LE RLD I Sbjct: 12 REKEKKSRYRIRLEEKQKLRFHYG-LTDRQLLQYVRIARRAKGSTGQVLLQLLEMRLDNI 70 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVN R V+I SYRCK DVI +K + + + + L Sbjct: 71 LFRLGMASTIPGARQLVNHRHILVNDRMVDIPSYRCKPKDVIAIKDQQRSRNIINKNIDL 130 Query: 160 AER------------------------------DVPEYISVNHDNMVATFVRIPSSLKDV 189 +++ VP +++ + RI S + Sbjct: 131 SKKHQEISRLISKRIIKRKKILFFLFKKHEMKHKVPFHLTFDSSQYKGVVNRIIDSTR-- 188 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LV+E++SR Sbjct: 189 -IGLSINELLVIEYFSR 204 >gi|42541373|gb|AAS19537.1| ribosomal protein small subunit 4 [Polypodiopteris brachypoda] Length = 189 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A ++RG T L+ LE RLD Sbjct: 24 QPASRKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 82 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ T+ AARQ VNHRH+LVN VNI SYRCK D+I V+ + ++ Sbjct: 83 VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 142 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 ++ P+++++ D + + + LVVE+Y Sbjct: 143 GGDKT-PDHLTISLSEDDKPTGLVNCV---ANRESVNLNINELLVVEYY 187 >gi|51458078|gb|AAU03392.1| ribosomal protein small subunit 4 [Asplenium auritum] Length = 193 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 8/169 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG +SE++ + A ++RG T + LE RLD Sbjct: 30 QSTSRKISQFCVRLEAKQRLRFNYG-LSERQLLRYVRIARKTRGSTGQVSLQLLEMRLDN 88 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN +I SYRC D+I V+ + + L+ Sbjct: 89 VLFQLGMASTIPAARQLVNHRHILVNNWIADIPSYRCNPKDIITVRNRPTSCNA-LKNRS 147 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 P++++V D + R+ + + + LV E+Y Sbjct: 148 FVGYKTPDHLTVSLSEGDKPTGSANRVGNR---ESINLNINELLVGEYY 193 >gi|107770440|gb|ABF83761.1| small ribosomal protein 4 [Dacrycarpus imbricatus] gi|170516245|gb|ACB15124.1| small ribosomal protein 4 [Dacrycarpus imbricatus] Length = 207 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 38/207 (18%) Query: 34 PGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89 PGL RR K K S + ++L KQK++ +YG +++++ + A R++G T L+ Sbjct: 3 PGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGSTGQVLL 61 Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC DVI +K + + Sbjct: 62 QLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITIKDRQRS 121 Query: 150 LASVLEASQLAER------------------------------DVPEYISVNHDNMVATF 179 + + L+++ VP +++++ Sbjct: 122 RNIINKNIDLSKKHQERSRLISKRIINRKFILFFRFKKYFMKHTVPFHLTLDSSRYKGVV 181 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI S + + LV+E++SR Sbjct: 182 NRIIDST---GIGLNINELLVIEYFSR 205 >gi|32401896|gb|AAP80936.1| small ribosomal protein 4 [Juniperus communis] Length = 194 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 11/198 (5%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+ K+P R P + K S + ++L+ KQ+++ +YG + +++ Sbjct: 1 RLKTLPGLSKKTP--NRIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPKRQLLQY 57 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 58 VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSY 117 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKD 188 RCK D I +K+K + + ++ ++D VP +++ +I + + Sbjct: 118 RCKPQDFISIKEKQGLRNRMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR- 176 Query: 189 VPYPVIMQPNLVVEFYSR 206 + + LVV++YSR Sbjct: 177 --IGLKINELLVVKYYSR 192 >gi|190361257|gb|ACE76933.1| ribosomal protein small subunit 4 [Crepidomanes minutum] Length = 167 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 18/167 (10%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG +E++ + A +++G T L+ LE RLD IV+ Sbjct: 14 RKVSQFRVRLEAKQRLRFNYGS-TERQLLRYVRIAKKAKGSTGQVLLQLLEMRLDNIVFN 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + PTI AARQ VNHRH+LVN R V+I SYRCK D+I +K +R Sbjct: 73 LRMAPTIRAARQLVNHRHILVNNRFVDIPSYRCKPKDLITLK-----------NQGFLDR 121 Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP++++++ I + + LVVE+YSR Sbjct: 122 KVPDHLTLSFSESKIPKGLVNGI---ANRESINLSINELLVVEYYSR 165 >gi|312863483|ref|ZP_07723721.1| putative ribosomal protein S4 [Streptococcus vestibularis F0396] gi|311101019|gb|EFQ59224.1| putative ribosomal protein S4 [Streptococcus vestibularis F0396] Length = 129 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 9/135 (6%) Query: 73 IFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 +F +A + +G T N + LE RLD +VYR T ARQFVNH H+LV+G+ V+I Sbjct: 1 MFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIP 60 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SY G VI V++KS ++ ++LEA + A P ++S N + + +R+P + Sbjct: 61 SYCVTPGQVISVREKSLKVRAILEAVE-ATLGCPAFVSFNAKKLEGSLIRLPERDE---- 115 Query: 192 PVIMQPNLVVEFYSR 206 + LVVEFY++ Sbjct: 116 ---INEALVVEFYNK 127 >gi|134274703|emb|CAL30293.1| small ribosomal protein 4 [Lejeunea cavifolia] Length = 160 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 8/164 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K L K S + ++L KQK++ +YG ++E++ Sbjct: 4 RLGSLPGLTRKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQLLKY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + A +++G T L+ LE RLD ++ PTI ARQ VNHRH+ +N V+I SY Sbjct: 57 VRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHIFINDDIVDIPSY 116 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176 C+ GD+I ++ K K + + + +++ +P +++ + + Sbjct: 117 NCEPGDIITIRNKEKSQSIITKNMNSSQKLQIPNHLTFDSTQLR 160 >gi|307579486|gb|ADN63455.1| 30S ribosomal protein S4 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 115 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 5/118 (4%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150 LE+RLD ++YR F T AARQ V+HR VLVNG+ VN+ SY K GDV+ + Q++++ Sbjct: 1 MLETRLDNVIYRMGFAVTRPAARQLVSHRSVLVNGKMVNLPSYHVKPGDVVALSQRAQKY 60 Query: 151 ASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 V E+ + ++ +I V+ + F +P P + L+VE YS+ Sbjct: 61 LCVQESLTIKDQHGSAFSWIEVDSEKFSGVFKALPDRAD---LPSDINEALIVELYSK 115 >gi|32401876|gb|AAP80926.1| small ribosomal protein 4 [Cunninghamia lanceolata] Length = 181 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 9/164 (5%) Query: 48 FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107 + ++L+ KQK++ +YG ++E++ + A R++G T L+ LE RLD I++R Sbjct: 20 YPVRLKEKQKLRFHYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAL 78 Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE---RDV 164 TI ARQ VNHRH+LVN R V+I SYRCK D+I +K K + + + ++ + R V Sbjct: 79 TIPEARQLVNHRHILVNDRLVDIPSYRCKPQDLISIKDKQRLRNLINKNREIFQKEKRRV 138 Query: 165 PEYISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P ++++ + +I S + + + LVVE+YSR Sbjct: 139 PPHLNLIKKKSQYIGLVKKIIDSNR---ISLKINELLVVEYYSR 179 >gi|29422381|gb|AAO84586.1| small ribosomal protein 4 [Conostomum pentastichum] Length = 146 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 4/147 (2%) Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 ++ I+E++ + + A +++G T L+ LE RLD +++R PTI ARQ VNHRH Sbjct: 1 FHYGITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQXVNHRH 60 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179 +LVN R V+I SYR K D I +K A + ++ +P +++ N Sbjct: 61 ILVNDRIVDIPSYRXKPQDFITIKDPQXSHAIXSKNIDFHQKYXIPNHLTYNPLENKGLV 120 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I L + + L E+YSR Sbjct: 121 NQI---LBRESIGLKINELLXXEYYSR 144 >gi|32401838|gb|AAP80907.1| small ribosomal protein 4 [Podocarpus latifolius] Length = 222 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 45/229 (19%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ NL G K R K K S + ++L KQK++ +YG +++++ Sbjct: 4 LVRRLN-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTDRQL 51 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 52 LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDI 111 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER---------------------------- 162 SYRC DVI +K + + + + + L+++ Sbjct: 112 PSYRCNPKDVITIKDRQRSMNIITKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFM 171 Query: 163 --DVPEYISVNHDNMVATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206 VP +++++ I + + D + + LV+E++SR Sbjct: 172 KHTVPFHLTLDSSRYKGVVKYKGIVNRIIDSTGIGLNINELLVIEYFSR 220 >gi|32401854|gb|AAP80915.1| small ribosomal protein 4 [Phyllocladus aspleniifolius] Length = 204 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 34/197 (17%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K K S + ++L KQK++ +YG +++++ + A R++G T + LE RLD I Sbjct: 10 REKEKKSRYRVRLEEKQKLRFHYG-LTDRQLLQYVRIARRAKGSTGQVFLQLLEMRLDNI 68 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ VNHRH+LVNGR V+I SYRCK DVI +K + + + + L Sbjct: 69 IFRLGMALTIPGARQLVNHRHILVNGRIVDIPSYRCKPKDVIIIKDQQRSRNIINKNLDL 128 Query: 160 AE------------------------------RDVPEYISVNHDNMVATFVRIPSSLKDV 189 ++ R VP +++++ RI S + Sbjct: 129 SKKHQERSRLISKRVINRKEILFFRFKKYEMKRRVPFHLTLDSSQYKGVVNRIIDSTRIG 188 Query: 190 PYPVIMQPNLVVEFYSR 206 + LV+E++SR Sbjct: 189 W---NINELLVIEYFSR 202 >gi|157689584|gb|ABV65348.1| ribosomal protein S4 [Wendtia gracilis] Length = 197 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 37/197 (18%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 + L+L KQK++ +YG ++E++ + + A +S+G+T L+ + RLD I+++ Sbjct: 1 KKSYLLRLEEKQKLRFHYG-LTERQLLNYVRIAGKSKGETGQVLLQLIAMRLDNILFQLG 59 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-- 162 TI ARQ VNHRH+LVNGR V+I SYRCK D+I VK K + + E Sbjct: 60 MASTIPQARQLVNHRHILVNGRLVDIPSYRCKPRDIIIVKDDKKSRIMIENWMDMIEEKK 119 Query: 163 ---------------------------------DVPEYISVNHDNMVATFVRIPSSLKDV 189 +P++++ ++ S K Sbjct: 120 KKMIEEKKKKIENSLGTIQKKKKKIQDLMNSFERLPKHLTFQRSEYKGFVNQVVES-KSE 178 Query: 190 PYPVIMQPNLVVEFYSR 206 + + LVV +YSR Sbjct: 179 EIGLEINEFLVVAYYSR 195 >gi|307069670|ref|YP_003878147.1| 30S ribosomal subunit protein S4 [Candidatus Zinderia insecticola CARI] gi|306482930|gb|ADM89801.1| 30S ribosomal subunit protein S4 [Candidatus Zinderia insecticola CARI] Length = 208 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSK-----PSYFGLQLRAK 55 M++ K+KI RR L+ + K S + LQL K Sbjct: 1 MARYIGKKNKIYRRRIPELFLNNSVIIKKNKKKIFKKKIFNIKKKSFLYSSNYKLQLFEK 60 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K YG I EK+FR+ F + R RG+T+ N I LESRLD IVYR F T ARQ Sbjct: 61 QKIKYIYG-ILEKQFRNYFNLSIRKRGNTAENFIKLLESRLDNIVYRMGFTNTRSEARQI 119 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN 174 V+H+ + VN VNI SY KE D++ ++ K K ++ +L ++ P +I VN Sbjct: 120 VSHKFIKVNNIIVNIPSYLLKENDIVTLRNKFKNKNNIKNYLKLFKKIGFPNWIKVNIKK 179 Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++R P+ + V+EF+S+ Sbjct: 180 FEGIYLRKPNIKD---INEKINIFSVIEFFSK 208 >gi|224552892|gb|ACN54684.1| small ribosomal protein 4 [Araucaria araucana] Length = 216 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 45/229 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ + ++ K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLKDLPGLTKYRRIDRE-----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 49 RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRI 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166 V+ SYRC DVI +K + + + + L++++ Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKNQQRSRLISKRIIKRKKILFFLFKK 168 Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++++ RI + + + LV+E++SR Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214 >gi|32401852|gb|AAP80914.1| small ribosomal protein 4 [Microstrobos fitzgeraldii] Length = 204 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 33/196 (16%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R K K S + ++L KQK + +YG +++++ + A R++G T L+ LE RLD I Sbjct: 11 REKEKKSQYRIRLEEKQKCRFHYG-LTDRQLLRYVRIARRAKGSTGQVLLQLLEMRLDNI 69 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++R TI ARQ +NHRH+LVNGR V+I SYRC DVI +K + + + + L Sbjct: 70 LFRLGMTFTIPGARQLINHRHILVNGRIVDIPSYRCNPKDVITIKDQQRSRNIINKNIDL 129 Query: 160 AER-----------------------------DVPEYISVNHDNMVATFVRIPSSLKDVP 190 +++ +VP ++ + RI S + Sbjct: 130 SKKHQAKKHQERLRPISKNILFFKFKKREMKHEVPFHLILYSSQYKGVVNRIIDSTR--- 186 Query: 191 YPVIMQPNLVVEFYSR 206 + M LV+E++SR Sbjct: 187 IGLKMNELLVIEYFSR 202 >gi|56070063|gb|AAV70692.1| ribosomal protein 4 [Gnetum costatum] Length = 160 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L+ KQK++ ++G ++E++ R + A + +G T L+ LE RLD I+Y+ TI Sbjct: 9 LQEKQKIRFHFG-LTERQLRQYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLAGTIPG 67 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYI 168 ARQ VNHRH+LVN VNI SYRCK DVI +K K+ + ++ E+ +P ++ Sbjct: 68 ARQLVNHRHILVNDYVVNIPSYRCKPQDVITIKGKNPDQLKTIITRNRNKAREKKIPYHL 127 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +++ +I + ++ LV+E+Y Sbjct: 128 TLDLSQNKGIVNKIIDRKD---IQLNIKEMLVIEYY 160 >gi|162423608|gb|ABX89576.1| small ribosomal protein 4 [Araucaria cunninghamii] Length = 216 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 45/229 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ +L G K R K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLK-DLPGLTKYRRIDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 49 RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRI 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166 V+ SYRC DVI +K + + + + L ++ Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLTKKHQQRSRLISKRIIKRKKILFFLFKK 168 Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++++ RI + + + + LV+E++SR Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDTTR---INLNINELLVIEYFSR 214 >gi|212004151|gb|ACJ15384.1| Rps4 [Pellaea andromedifolia] Length = 178 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K F ++L AKQ+ + YG ++E++ + A ++RG T + LE RLD Sbjct: 11 QPASKKIFQFCVRLEAKQRXRLNYG-LTERQXLKYIRIARKTRGSTGQVPLQLLEMRLDN 69 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++++ TI AARQ VNHRH+LVN R V+I S RCK D+I ++ + + Sbjct: 70 VIFQLGIASTIPAARQLVNHRHILVNRRIVDIPSXRCKPKDIITIRNRPTSYNAAKV-ES 128 Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP++++++ + + + LVVE++SR Sbjct: 129 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 176 >gi|32401834|gb|AAP80905.1| small ribosomal protein 4 [Nageia nagi] Length = 218 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 45/228 (19%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 RR+ NL G K R K K S + ++L KQK++ +YG +++++ Sbjct: 1 IRRLK-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTDRQLL 48 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I Sbjct: 49 QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIP 108 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER----------------------------- 162 SYRC DVI +K + + + + L+++ Sbjct: 109 SYRCNPKDVITIKDRQRSRNIINKNIDLSKKHQERSRLISKRIINRKFILFFRFKKHFMK 168 Query: 163 -DVPEYISVNHDNMVATF--VRIPSSLKDVP-YPVIMQPNLVVEFYSR 206 VP +++++ I + + D + + LV+E++SR Sbjct: 169 HTVPFHLTLDSSRYKGVVNYKGIVNRIIDSTGIGLNINELLVIEYFSR 216 >gi|32401836|gb|AAP80906.1| small ribosomal protein 4 [Podocarpus henkelii] Length = 216 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 38/215 (17%) Query: 29 TRSYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84 + PGL RR K K S + ++L KQK++ +YG +++++ + A R++G T Sbjct: 1 RLNNLPGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGST 59 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC DVI +K Sbjct: 60 GQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITIK 119 Query: 145 QKSKQLASVLEASQLAER------------------------------DVPEYISVNHDN 174 + + + + + L+++ VP +++++ Sbjct: 120 DRQRSMNIITKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFMKHTVPFHLTLDSSR 179 Query: 175 MVATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206 I + + D + + LV+E++SR Sbjct: 180 YKGVVKYKGIVNRIIDSTGIGLNINELLVIEYFSR 214 >gi|190361253|gb|ACE76931.1| ribosomal protein small subunit 4 [Trichomanes lucens] Length = 161 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 18/163 (11%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S FG++L AKQ+++ YG E++ + A +++G T L+ LE RLD IV+R Sbjct: 14 RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRHVLVN V+I SYRCK+ D+I ++ + + + + Sbjct: 73 LGMAPTIPAARQLVNHRHVLVNNHIVDIPSYRCKDKDLITLR-----------SQESSRK 121 Query: 163 DVPEYISVNHD---NMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 +P+++ + + N I + + LVVE Sbjct: 122 RIPDHLKFSSEQGNNPKGLVNGI---ANRESIDLNINELLVVE 161 >gi|7576621|gb|AAF63923.1| ribosomal protein system 4 [Entodontopsis leucostega] Length = 153 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 2 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162 PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K A + + + ++ Sbjct: 61 GMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKS 120 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +P +++ + +I L + + Sbjct: 121 KIPNHLTYSSLEKKGLVNQI---LNRESIGLKINEL 153 >gi|56070071|gb|AAV70696.1| ribosomal protein 4 [Ephedra likiangensis] Length = 162 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 9/166 (5%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + + L+ KQK++ +YG ++E++ R A ++G T L+ LE RLD I++R Sbjct: 1 KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161 TI ARQ VNHRH+LVN V+I SYRCK D+I +K K + + + Sbjct: 60 GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119 Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 VP Y++ N +I + + ++ LV+E+Y Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEXLVIEYY 162 >gi|238021615|ref|ZP_04602041.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147] gi|237866229|gb|EEP67271.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147] Length = 102 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 4/105 (3%) Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 F T ARQ V+H+ ++VNG+ VNI S++ K GDV+ +++K+K+ + EA LA + Sbjct: 1 MGFASTRAEARQLVSHKAIMVNGQVVNIPSFQVKAGDVVAIREKAKKQVRIQEAMGLATQ 60 Query: 163 -DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++SV+ + TF +P + + LVVEFYS+ Sbjct: 61 IGLPSWVSVDATKLEGTFKNVPDRAELYS---DINEQLVVEFYSK 102 >gi|311223002|gb|ADP76583.1| small ribosomal protein 4 [Noteroclada confluens] Length = 122 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 3/124 (2%) Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 T J+ LE RLD ++R TI ARQ VN RH+L+N V+I SY C+ GDVI Sbjct: 2 STGEXJLQLLEMRLDNTIFRLGMSSTIPGARQLVNXRHILINDNMVDIPSYNCEPGDVIT 61 Query: 143 VKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 VK + + + + + + +P ++++N + ++ + + + LVVE Sbjct: 62 VKNRRESQSIIAKNMEFQRPXIPNHLTLNSIQFQGSVNQVINR---ECJDLKINELLVVE 118 Query: 203 FYSR 206 +YSR Sbjct: 119 YYSR 122 >gi|56070073|gb|AAV70697.1| ribosomal protein 4 [Ephedra equisetina] gi|56070075|gb|AAV70698.1| ribosomal protein 4 [Ephedra intermedia] gi|56070077|gb|AAV70699.1| ribosomal protein 4 [Ephedra minuta] gi|56070079|gb|AAV70700.1| ribosomal protein 4 [Ephedra frustillata] gi|56070081|gb|AAV70701.1| ribosomal protein 4 [Ephedra andina] gi|56070083|gb|AAV70702.1| ribosomal protein 4 [Ephedra gerardiana] gi|56070085|gb|AAV70703.1| ribosomal protein 4 [Ephedra monosperma] gi|56070087|gb|AAV70704.1| ribosomal protein 4 [Ephedra sinica] gi|56070089|gb|AAV70705.1| ribosomal protein 4 [Ephedra frustillata] gi|56070091|gb|AAV70706.1| ribosomal protein 4 [Ephedra sinica] gi|56070093|gb|AAV70707.1| ribosomal protein 4 [Ephedra californica] gi|56070095|gb|AAV70708.1| ribosomal protein 4 [Ephedra equisetina] gi|56070097|gb|AAV70709.1| ribosomal protein 4 [Ephedra fragilis] gi|56070099|gb|AAV70710.1| ribosomal protein 4 [Ephedra gerardiana] gi|56070103|gb|AAV70712.1| ribosomal protein 4 [Ephedra minuta] gi|56070105|gb|AAV70713.1| ribosomal protein 4 [Ephedra minuta] gi|56070107|gb|AAV70714.1| ribosomal protein 4 [Ephedra antisyphilitica] gi|56070109|gb|AAV70715.1| ribosomal protein 4 [Ephedra intermedia] gi|56070111|gb|AAV70716.1| ribosomal protein 4 [Ephedra torreyana] gi|56070113|gb|AAV70717.1| ribosomal protein 4 [Ephedra gerardiana] gi|56070115|gb|AAV70718.1| ribosomal protein 4 [Ephedra distachya] gi|56070117|gb|AAV70719.1| ribosomal protein 4 [Ephedra trifurca] gi|56070119|gb|AAV70720.1| ribosomal protein 4 [Ephedra major subsp. procera] gi|56070121|gb|AAV70721.1| ribosomal protein 4 [Ephedra nevadensis] gi|56070123|gb|AAV70722.1| ribosomal protein 4 [Ephedra rupestris] gi|56070125|gb|AAV70723.1| ribosomal protein 4 [Ephedra likiangensis] gi|56070127|gb|AAV70724.1| ribosomal protein 4 [Ephedra chilensis] gi|56070129|gb|AAV70725.1| ribosomal protein 4 [Ephedra tweediana] gi|56070131|gb|AAV70726.1| ribosomal protein 4 [Ephedra distachya] gi|56070133|gb|AAV70727.1| ribosomal protein 4 [Ephedra equisetina] gi|56070135|gb|AAV70728.1| ribosomal protein 4 [Ephedra aphylla] gi|56070137|gb|AAV70729.1| ribosomal protein 4 [Ephedra altissima] gi|56070139|gb|AAV70730.1| ribosomal protein 4 [Ephedra altissima] gi|56070141|gb|AAV70731.1| ribosomal protein 4 [Ephedra alata] gi|56070143|gb|AAV70732.1| ribosomal protein 4 [Ephedra foliata] gi|56070145|gb|AAV70733.1| ribosomal protein 4 [Ephedra foliata] gi|56070147|gb|AAV70734.1| ribosomal protein 4 [Ephedra ciliata] gi|56070149|gb|AAV70735.1| ribosomal protein 4 [Ephedra campylopoda] gi|56070151|gb|AAV70736.1| ribosomal protein 4 [Ephedra major] gi|56070153|gb|AAV70737.1| ribosomal protein 4 [Ephedra pachyclada] gi|270356472|gb|ACZ80491.1| ribosomal protein 4 [Ephedra major subsp. procera] gi|270356474|gb|ACZ80492.1| ribosomal protein 4 [Ephedra lomatolepis] gi|270356476|gb|ACZ80493.1| ribosomal protein 4 [Ephedra foliata] gi|270356478|gb|ACZ80494.1| ribosomal protein 4 [Ephedra foliata] gi|270356480|gb|ACZ80495.1| ribosomal protein 4 [Ephedra foliata] gi|270356484|gb|ACZ80497.1| ribosomal protein 4 [Ephedra major subsp. major] gi|270356486|gb|ACZ80498.1| ribosomal protein 4 [Ephedra distachya] gi|270356488|gb|ACZ80499.1| ribosomal protein 4 [Ephedra fragilis] gi|270356490|gb|ACZ80500.1| ribosomal protein 4 [Ephedra lomatolepis] gi|270356492|gb|ACZ80501.1| ribosomal protein 4 [Ephedra major subsp. procera] gi|270356496|gb|ACZ80503.1| ribosomal protein 4 [Ephedra fragilis] gi|270356498|gb|ACZ80504.1| ribosomal protein 4 [Ephedra laristanica] gi|270356500|gb|ACZ80505.1| ribosomal protein 4 [Ephedra milleri] Length = 162 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 9/166 (5%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + + L+ KQK++ +YG ++E++ R A ++G T L+ LE RLD I++R Sbjct: 1 KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161 TI ARQ VNHRH+LVN V+I SYRCK D+I +K K + + + Sbjct: 60 GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119 Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 VP Y++ N +I + + ++ LV+E+Y Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEMLVIEYY 162 >gi|56070101|gb|AAV70711.1| ribosomal protein 4 [Ephedra chilensis] Length = 162 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 9/166 (5%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + + L+ KQK++ +YG ++E++ R A ++G T L+ LE RLD I++R Sbjct: 1 KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161 TI ARQ VNHRH+LVN V+I SYRCK D+I +K K + + + Sbjct: 60 GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119 Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 VP Y++ N +I + + ++ LV+E+Y Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLXIKEMLVIEYY 162 >gi|162423604|gb|ABX89574.1| small ribosomal protein 4 [Araucaria bidwillii] gi|162423606|gb|ABX89575.1| small ribosomal protein 4 [Araucaria brasiliensis] Length = 216 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 45/229 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ +L G K R K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLK-DLPGLTKYRRIDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 49 RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRI 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166 V+ SYRC DVI +K + + + L+++ Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKINIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168 Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++++ RI + + + LV+E++SR Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214 >gi|147767143|emb|CAN75644.1| hypothetical protein VITISV_031266 [Vitis vinifera] Length = 132 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS + + RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSCYRGXRFQKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 +YG ++E++ + A +++ L+ LE LD I++R TI ARQ VNHRH Sbjct: 57 HYG-LTERQLLNYVHIARKAKWAIGRVLLQLLEMHLDNILFRLGMASTILGARQLVNHRH 115 Query: 121 VLVNGRSVNIGSYRCKE 137 +LVNGR V+I SY CK Sbjct: 116 ILVNGRIVDIPSYCCKP 132 >gi|37992509|gb|AAR06433.1| small ribosomal protein 4 [Ephemeropsis trentepohlioides] Length = 219 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 38/222 (17%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K P S + K S + ++L KQK++ YYG +SE++ + Sbjct: 1 RRLGVLXGLTNKIPQVKSSS---SNQSTSNKKISQYRIRLEEKQKLRFYYG-VSEQQLLN 56 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A +++G T L+ LE RLD+I++R PTI ARQ ++HR++LVN V+I S Sbjct: 57 YVRIARKAKGSTGEVLLQLLEMRLDSIIFRLSMAPTIPGARQLISHRNILVNNFIVDIPS 116 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQL-------------------------------AE 161 YRCK D I +K K K ++ + +L + Sbjct: 117 YRCKPQDFISMKNKEKSEFTINKNIELHPKSELIVNKKIDLHPKKKIDLHPKKKIDLHPK 176 Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 ++P +++ N +I +I+ L+ E+ Sbjct: 177 SEIPNHLTYNALEKTGLVNKIVDR---ELVGLIINELLLAEY 215 >gi|17154633|emb|CAC83930.1| ribosomal protein S4 [Ixiolirion tataricum] Length = 184 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 12/186 (6%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKS-----KPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 L G + RS Q R K S + L+L KQK++ +YG +++++ Sbjct: 3 LQGLTRKIPKKRSKREEPKNQSRSKIPYSGKKSEYHLRLEEKQKVRFHYG-LTDRQLLRY 61 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 A +++G TS L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SY Sbjct: 62 VHIAGKAKGSTSQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121 Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIPSSLKDVP 190 RCK D+I K K + A + + ++ +P +++++ +I S Sbjct: 122 RCKPRDIITTKDKQRSKALIQNHIASSPHKKKKLPVHLTIDSSQSKGLVNQIIDSQ---W 178 Query: 191 YPVIMQ 196 + ++ Sbjct: 179 IGLKIK 184 >gi|56070061|gb|AAV70691.1| ribosomal protein 4 [Gnetum gnemon] Length = 160 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L+ KQK++ ++G ++E++ R + A + +G T L+ L+ RLD I+Y+ TI Sbjct: 9 LQEKQKIRFHFG-LTERQLRQYVQIAQKVQGSTGQVLLQLLKMRLDNILYQLGLAGTIPG 67 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYI 168 ARQ VNHRH+LVN VNI SYRCK DVI +K K+ L ++ E+ +P ++ Sbjct: 68 ARQLVNHRHILVNDYVVNIPSYRCKPQDVITIKGKNPDQLKTLITRNRNKAREKKIPYHL 127 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 +++ +I + ++ LV+E+Y Sbjct: 128 TLDLSQNKGIVNKIIDRKD---IQLNIKEMLVIEYY 160 >gi|170516231|gb|ACB15117.1| small ribosomal protein 4 [Microcachrys tetragona] Length = 221 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 50/234 (21%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ N+ G K R K K S + ++L KQK + +YG +++ Sbjct: 1 RIKLIRRLK-NIPGLTKYRRVDRE----------KEKKSQYRIRLEEKQKCRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R++G T L+ LE RLD I++R TI ARQ +NHRH+LVNGR Sbjct: 49 RQLLRYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMTFTIPGARQLINHRHILVNGRI 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------- 162 V+I SYRC DVI +K + + + + L+++ Sbjct: 109 VDIPSYRCNPKDVITIKDQQRSRNIINKNRDLSKKHQAKKHQERLRPISKRIINRKNILF 168 Query: 163 ----------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +VP ++ + RI S + + M LV+E++SR Sbjct: 169 FKFKKREMKHEVPFHLILYSSQYKGVVNRIIDSTR---IGLKMNELLVIEYFSR 219 >gi|52788781|gb|AAU87371.1| ribosomal protein small subunit 4 [Adiantum raddianum] Length = 188 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 8/193 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ K+ ++ Q K S F ++L AKQ+++ YG ++E Sbjct: 1 RLKLMRRLKNLPGLAGKNNASSSGEFRVAGDQSTSRKISQFCVRLEAKQRLRLNYG-LTE 59 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R Sbjct: 60 RQLLKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRI 119 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD---NMVATFVRIPS 184 V+I SYR K D+I ++ + +V ++ L +VP++++++ + Sbjct: 120 VDIPSYRRKPSDIITIRNRPTSY-NVAKSESLERDEVPDHLTLSLSETGEPTGLVSHTVN 178 Query: 185 SLKDVPYPVIMQP 197 + + Sbjct: 179 R---ESVKLDINE 188 >gi|33413169|emb|CAD86767.1| ribosomal protein small subunit 4 [Codriophorus fascicularis] Length = 153 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 5/153 (3%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 K+P + ++ K S + ++L KQK++ +YG ++E++ + + A ++ Sbjct: 1 LTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKA 56 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD +++R PTI ARQ VNHRH+LVN VNI SYRCK D Sbjct: 57 KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDF 116 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172 I +K + K A +++ +++ +P +++ N Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNS 149 >gi|314906639|gb|ADT61838.1| ribosomal protein subunit 4 [Scleropodium obtusifolium] Length = 168 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 2/153 (1%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 J+ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 11 JNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 + ++ +P +++ + +I Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQILDRES 162 >gi|32401842|gb|AAP80909.1| small ribosomal protein 4 [Podocarpus salignus] Length = 222 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 38/213 (17%) Query: 28 NTRSYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 + PGL RR K K S + ++L KQ ++ +YG +++++ + A R++G Sbjct: 6 RRXNNLPGLTQYRRVDREKEKKSRYRIRLEEKQXVRFHYG-LTDRQLLQYVRIARRAKGS 64 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC DVI + Sbjct: 65 TGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITI 124 Query: 144 KQKSKQLASVLEASQLAER------------------------------DVPEYISVNHD 173 K + + + + + L+++ VP +++++ Sbjct: 125 KDRQRSMNIINKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFMKHTVPFHLTLDSS 184 Query: 174 NMVATFVR--IPSSLKDVP-YPVIMQPNLVVEF 203 I + + D + + LV+E+ Sbjct: 185 RYKGVVKYKGIVNRIIDSTGIGLNINELLVIEY 217 >gi|32401846|gb|AAP80911.1| small ribosomal protein 4 [Afrocarpus falcatus] Length = 216 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%) Query: 31 SYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86 + PGL RR K K S + ++L KQK++ +YG +++++ + A R++G T Sbjct: 3 NNLPGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGSTGQ 61 Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 L+ LE RLD I++R TI ARQ NHRH+LVNGR V+I SYRC DVI +K + Sbjct: 62 VLLQLLEMRLDNILFRLGMALTIPGARQLXNHRHILVNGRMVDIPSYRCNPKDVITIKDR 121 Query: 147 SKQLASVLEASQLAER------------------------------DVPEYISVNHDNMV 176 + + + L+++ VP +++++ Sbjct: 122 QRSRNIINKNIDLSKKHQERSRPISKRIINRKFILFFRFKKHFMKHTVPFHLTLDSSRYK 181 Query: 177 ATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206 I + + D + + LV+E++SR Sbjct: 182 GVVKYKGIVNRIIDSTGIGLNINELLVIEYFSR 214 >gi|162423610|gb|ABX89577.1| small ribosomal protein 4 [Wollemia nobilis] Length = 216 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 45/229 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ +L G K R K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLK-DLPGLTKYRRIDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ V HRH+LVNGR Sbjct: 49 RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMTLTIPGARQLVCHRHILVNGRI 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166 V+ SYRC DVI +K + + + + L+++ Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168 Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++++ RI + + + LV+E++SR Sbjct: 169 QEMRQYSQIHLTLDPFRHKGVVNRIIDITR---INLNINELLVIEYFSR 214 >gi|226329505|ref|ZP_03805023.1| hypothetical protein PROPEN_03414 [Proteus penneri ATCC 35198] gi|225202691|gb|EEG85045.1| hypothetical protein PROPEN_03414 [Proteus penneri ATCC 35198] Length = 102 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 4/105 (3%) Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE- 161 F T ARQ V+H+ ++VNGR VNI SY+ DV+ V++KSK+ + + A +LAE Sbjct: 1 MGFGATRAEARQMVSHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQ 60 Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ P ++ V+ M F RIP + +L+VE YS+ Sbjct: 61 REKPTWLEVDAAKMEGVFKRIPERTD---LSADINEHLIVELYSK 102 >gi|314906635|gb|ADT61836.1| ribosomal protein subunit 4 [Scleropodium touretii] Length = 168 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 2/153 (1%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L KQK++ +YG I+E++ + + A +++G T L+ E R Sbjct: 11 INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN V+I SYRCK D I +K + K + + Sbjct: 70 LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129 Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187 + ++ +P +++ + +I Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQILDRES 162 >gi|32401880|gb|AAP80928.1| small ribosomal protein 4 [Glyptostrobus lineatus] Length = 179 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 9/164 (5%) Query: 48 FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107 + ++L+ KQ+++ +YG ++E++ + A R++G T L+ LE RLD I++R Sbjct: 18 YPVRLKEKQRLRFHYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAL 76 Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---V 164 TI ARQ VNHRH LVN R V I SYRCK + +K K + + + ++D V Sbjct: 77 TIPEARQLVNHRHXLVNDRIVEIPSYRCKPQYFLSIKDKQWLRDRIYKNIDIFQKDXMRV 136 Query: 165 PEYISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P +++ +I + + + + LVVE+YSR Sbjct: 137 PPHLNRIKKKSQYSGLVKKIIDNNR---IGLKINELLVVEYYSR 177 >gi|45271068|gb|AAS56922.1| ribosomal protein small subunit 4 [Adiantum raddianum] Length = 187 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 K+ RR+ K+ ++ Q K S F ++L AKQ+++ YG ++E+ Sbjct: 1 LKLMRRLKNLPGLAGKNNASSSGEFRVAGDQSTSRKISQFCVRLEAKQRLRLNYG-LTER 59 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + A R+RG T + LE RLD ++++ TI AARQ V+HRH+LVN R V Sbjct: 60 QLLKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIV 119 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD---NMVATFVRIPSS 185 +I SYR K D+I ++ + +V ++ L +VP++++++ + Sbjct: 120 DIPSYRRKPSDIITIRNRPTSY-NVAKSESLERDEVPDHLTLSLSETGEPTGLVSHTVNR 178 Query: 186 LKDVPYPVIMQP 197 + + Sbjct: 179 ---ESVKLDINE 187 >gi|162423600|gb|ABX89572.1| small ribosomal protein 4 [Agathis dammara] gi|162423602|gb|ABX89573.1| small ribosomal protein 4 [Agathis robusta] Length = 216 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 45/229 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ + ++ K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLKDLPGLTKYRRIDRE-----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ V HRH+LVN R Sbjct: 49 RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMTLTIPGARQLVCHRHILVNSRI 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166 V+ SYRC DVI +K + + + + L+++ Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168 Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++++ RI + + + LV+E++SR Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214 >gi|170516239|gb|ACB15121.1| small ribosomal protein 4 [Austrotaxus spicata] Length = 199 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 10/202 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI + L KSP + P + R KPS + ++L+ KQK+ +Y +E Sbjct: 1 RLKIINCLKILLGLSKKSPNIKK---PRVKKHYRAPKPSKYPIRLKKKQKVGFHY-KFTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ A RS G L+ LE LD I+++ TI AR+ NHR +L+N R Sbjct: 57 RQLLQCSHIARRSEGYIVEVLLQLLEINLDNIIFQLGMASTIPGARKLFNHRDILLNNRI 116 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDNMVATFVRIPS 184 V+I SY CK D+I +K + + + + LA+RD VP + N + ++ + Sbjct: 117 VDIPSYHCKPQDLISIKDQQRSRNIINKNIDLAKRDKMRVPNLL--NLKKEKSQYIELVK 174 Query: 185 SLKDV-PYPVIMQPNLVVEFYS 205 + D + + LV+E+YS Sbjct: 175 KIIDSKWISLKINELLVIEYYS 196 >gi|294669849|ref|ZP_06734908.1| hypothetical protein NEIELOOT_01742 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308242|gb|EFE49485.1| hypothetical protein NEIELOOT_01742 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 102 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 4/105 (3%) Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-E 161 F T ARQ V H+ ++VNG VNI S++ + GDV+ V++K+K+ + EA LA + Sbjct: 1 MGFGSTRAEARQLVAHKAIVVNGHVVNIPSFQVQPGDVVAVREKAKKQVRIQEALGLAIQ 60 Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P +++V+ M F +P + + LVVEFYS+ Sbjct: 61 IGLPGWVAVDTGKMEGIFKNMPDRSE---LTGDINEQLVVEFYSK 102 >gi|2739258|emb|CAA10996.1| 30S ribosomal protein S4 [Prototheca wickerhamii] Length = 161 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S +G++L+ K K++ YG I+E++ + +EA R +G T L+ LE RLD I+YR Sbjct: 2 KESQYGIRLKEKTKLRYNYG-INERQLINYVREARRRKGSTGEVLLQLLEMRLDNIIYRL 60 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-R 162 F PTI AARQ +NH H+ VN +++NI SY CK D+I V + Q Sbjct: 61 GFAPTIPAARQLINHGHINVNNKNINIPSYICKINDIISV--LKNSQQLIKNYLQNGGIS 118 Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ +++N + + A+ I + + LV+E+YSR Sbjct: 119 ELSTCLNLNKEKLEASINNIIPRD---LVKLEINELLVIEYYSR 159 >gi|326565699|gb|EGE15862.1| 30S ribosomal protein S4 [Moraxella catarrhalis 12P80B1] Length = 131 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 7/128 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55 M++ K K+ RR G +L + P + ++ PG HG + Y QLR K Sbjct: 1 MARYIGPKLKLSRREGTDLQLKSGVKPYDVKTKKAGRVPGQHGNSQNKTSEY-ASQLREK 59 Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 QK+K+ YG + E++F + +KEA R RG T NL+ LE RLD +VYR F T ARQ Sbjct: 60 QKVKRMYGVL-ERQFSNYYKEAARERGATGENLLVTLERRLDNVVYRMGFGATRAEARQL 118 Query: 116 VNHRHVLV 123 V+HR +++ Sbjct: 119 VSHRAIML 126 >gi|108773404|ref|YP_635923.1| ribosomal protein S4 [Helicosporidium sp. ex Simulium jonesii] gi|122197338|sp|Q2EEX1|RR4_HELSJ RecName: Full=Plastid 30S ribosomal protein S4 gi|87242979|gb|ABD33971.1| ribosomal protein S4 [Helicosporidium sp. ex Simulium jonesi] Length = 173 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 2/156 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP-VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59 M + + +I RR+G+ K P + ++ G ++ K +PS +GL+L AKQ+ Sbjct: 1 MGRYRGPRLRIIRRLGDLPLFTKKKPHIASKRLPLGHPVRKIKRRPSIYGLRLLAKQRCC 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + + + ++ K+A ++GD NLI LESRLD+ +YR+ V T+ AARQ + H Sbjct: 61 YSYG-LRDYQLKNYIKKARNAQGDPIKNLIFLLESRLDSKIYRSGIVSTMAAARQLITHG 119 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 HVLV+ + I SY C E +++ K + + Sbjct: 120 HVLVDNIKITIPSYSCNESQILDYKNTKLTSELIEK 155 >gi|51458112|gb|AAU03407.1| ribosomal protein small subunit 4 [Asplenium cordatum] Length = 172 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 8/162 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q K S F ++L AKQ+++ YG ++E++ + A R+RG T + LE RLD Sbjct: 16 QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 74 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 +++ TI AARQ VNHRH+LVN V+I SYRCK D I V+ + ++ S Sbjct: 75 VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPNSCNALRNKSL 134 Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQP 197 + E+ P++++V D R+ + P + + Sbjct: 135 VGEKT-PDHLTVSLSEGDRPTGLVNRVANRK---PINLNINE 172 >gi|32401848|gb|AAP80912.1| small ribosomal protein 4 [Dacrydium cupressinum] Length = 217 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 45/227 (19%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+ NL G K R K K S + ++L KQK++ +YG +++++ Sbjct: 1 RRLN-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQ 48 Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + A R++G T L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I S Sbjct: 49 YVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPS 108 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------------ 162 YRC DVI +K + + + + L+++ Sbjct: 109 YRCNPKDVITIKDRQRSRNIITKNIDLSKKHQERSRLISKRIINRKFIRFFRFKKYFMKH 168 Query: 163 DVPEYISVNHDNMVATFVR--IPSSLKDV-PYPVIMQPNLVVEFYSR 206 VP ++++ F I + + D + + LV+E++SR Sbjct: 169 TVPFHLTLGSSRYKGVFKYKGIVNRIIDSAGIGLNINELLVIEYFSR 215 >gi|32401858|gb|AAP80917.1| small ribosomal protein 4 [Araucaria heterophylla] Length = 209 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 38/207 (18%) Query: 34 PGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89 PGL RR K K S + ++L KQK++ +YG +++++ + A R+ G T L+ Sbjct: 5 PGLTKYRRIDREKEKKSRYRIRLEEKQKLRFHYG-LTDRQLLQYVRIARRAEGSTGEVLL 63 Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 LE RLD I++R TI ARQ V HRH+LVNGR V+ SYRC DVI +K + + Sbjct: 64 QLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRIVDKPSYRCNPYDVITIKDQQRS 123 Query: 150 LASVLEASQLAERDVPE------------------------------YISVNHDNMVATF 179 + + L+++ +++++ Sbjct: 124 RNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKKQEMRQYSQIHLTLDPFRYKGVV 183 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + + LV+E++SR Sbjct: 184 NRIIDITR---INLNINELLVIEYFSR 207 >gi|32401844|gb|AAP80910.1| small ribosomal protein 4 [Lagarostrobos franklinii] Length = 216 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 45/226 (19%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + RR+ NL G K R + K S + ++L KQK++ +YG +++++ Sbjct: 4 LIRRLK-NLPGLTKYRRVDRE----------EEKKSRYRIRLEEKQKLRFHYG-LTDRQL 51 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R+ G T L+ LE RLD I++R TI ARQ VNHRH+LVNG V+I Sbjct: 52 LQYIRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGLMVDI 111 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER---------------------------- 162 SYRCK DVI +K + + + + L ++ Sbjct: 112 PSYRCKSKDVITIKDRQRSRNIINKNRDLYKKHQKRPRFISKRIINRKKNLSLRFQKYEM 171 Query: 163 --DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 VP ++++ +I + + + + LV+E++SR Sbjct: 172 KHKVPFHLTLYSSQYKGVVNQIIDN---ISIGLDINELLVIEYFSR 214 >gi|107770430|gb|ABF83756.1| small ribosomal protein 4 [Taxus wallichiana var. chinensis] Length = 189 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI R+ K P R P + KPS + ++L+ KQ+++ +YG ++E Sbjct: 1 RLKIINRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRFHYG-LTE 57 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A RS+G T L+ LE RLD I++R TI ARQ V+HRH+LVN R Sbjct: 58 RQLLQYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRHILVNDRI 117 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRI 182 V+I SYRCK D+I +K + + + + L++RD VP ++++ + +I Sbjct: 118 VDIPSYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQYIGLVKKI 177 Query: 183 PSSLK 187 S + Sbjct: 178 IDSKR 182 >gi|99640025|emb|CAJ45142.1| putative ribosomal protein S4 gene [Hymenophyllopsis dejecta] Length = 185 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 16/194 (8%) Query: 11 IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68 + RR+ K+ P TR+ Q K S F ++L AKQ+++ YG ++E+ Sbjct: 1 VIRRLKNLPGLTGKTSNPGKTRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTER 55 Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 R + A +++G T + LE RLD I++ + TI AARQ VNHRH+LVN R V Sbjct: 56 LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIV 114 Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIP 183 ++ SYRCK D+I V+ ++ + + R +P++++ + RI Sbjct: 115 DVPSYRCKPKDIITVRDRATSYNGLRSGINESSRGDGIPDHLTFSLLEGNRSKGLVNRI- 173 Query: 184 SSLKDVPYPVIMQP 197 + + Sbjct: 174 --ANRESIDLNINE 185 >gi|121730284|ref|ZP_01682658.1| topoisomerase IV subunit A [Vibrio cholerae V52] gi|121627964|gb|EAX60527.1| topoisomerase IV subunit A [Vibrio cholerae V52] Length = 102 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 4/105 (3%) Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE- 161 F T ARQ V+H+ +LVNG+ VN+ S+ DV+ V++K+K+ + + A ++AE Sbjct: 1 MGFGATRAEARQLVSHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQ 60 Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ P +I V+ + M TF R+P + L+VE YS+ Sbjct: 61 REKPTWIEVDVNTMEGTFKRMPERSD---LSADINEQLIVELYSK 102 >gi|51458136|gb|AAU03417.1| ribosomal protein small subunit 4 [Asplenium trichomanes subsp. trichomanes] gi|51458138|gb|AAU03418.1| ribosomal protein small subunit 4 [Asplenium trichomanes subsp. inexpectans] Length = 169 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 8/143 (5%) Query: 68 KKF-RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 +F + + R+RG T + LE RLD +++ TI AARQ VNHRH+LVN Sbjct: 29 SQFCVRLEAKQRRTRGSTGQVPLQLLEMRLDNVLFHLGMASTIPAARQLVNHRHILVNNC 88 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIP 183 V+I SYRCK D+I V+ + ++ S + ++ P++++V D R+ Sbjct: 89 IVDIPSYRCKPKDLITVRNRPTSCNALRNKSLVGDKT-PDHLTVSLSEGDRPTGLVNRV- 146 Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 147 --ANRESINLNINELLVVEYYSR 167 >gi|11466526|ref|NP_044775.1| ribosomal protein S4 [Reclinomonas americana] gi|3914928|sp|O21263|RT04_RECAM RecName: Full=Ribosomal protein S4, mitochondrial gi|2258356|gb|AAD11890.1| ribosomal protein S4 [Reclinomonas americana] Length = 249 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 46/249 (18%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-----KSPVNTRSYGPGLHGQRRKSKPSY-------- 47 M+KR SSK K+ + G N+WG+ + + PG H ++ K Y Sbjct: 1 MTKRLSSKQKVYTQTGINIWGKGPFLWKNNTKDKWKNTPGEHKKKHKLLERYSPMIRGDS 60 Query: 48 --------------------------FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 + QL+ KQK++K+Y +++EK+F + + +A + Sbjct: 61 INEMNQLGYLIPKSKNEVKISYYEPRYASQLKEKQKLRKFYANVTEKQFYNYYVKAKSFK 120 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 G NLI LE RLD I+YRA FV +I+ AR VNH+HVLVN + NI SY + GD+I Sbjct: 121 GKIGDNLIKMLERRLDIIIYRAGFVNSIYQARLLVNHKHVLVNNKIQNISSYLVQNGDMI 180 Query: 142 EVKQKSKQLAS------VLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195 +K + L +L+ S + Y+ V++ M ++ P + ++ +P + Sbjct: 181 SIKPEIVNLLRNQYNWDILQKSNGSFLKYLPYLEVDYKTMSCIYLYTPE-MNEIYFPFQL 239 Query: 196 QPNLVVEFY 204 N V+ +Y Sbjct: 240 DMNKVIRYY 248 >gi|270289723|ref|ZP_06196025.1| 30S ribosomal protein S4 [Chlamydia muridarum Weiss] Length = 147 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 2/144 (1%) Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 I EK+ +KE +G+ + + E RLD IVYR F TIFAA+Q V+H HVLV Sbjct: 1 MILEKQLVKAYKEVVHKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGHVLV 60 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182 NG+ V+ S+ + G I +K+KS++LA V E+ + + +P Y+S++ V Sbjct: 61 NGKKVDRRSFFVRPGMQISLKEKSRRLAIVTESLENKDQSSLPAYLSLDKAAFKGELVVS 120 Query: 183 PSSLK-DVPYPVIMQPNLVVEFYS 205 P + P+ + +++ EF S Sbjct: 121 PELDQISSQLPLPVNVSVICEFLS 144 >gi|162423598|gb|ABX89571.1| small ribosomal protein 4 [Agathis alba] Length = 216 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 45/229 (19%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + K+ RR+ + ++ K K S + ++L KQK++ +YG +++ Sbjct: 1 RIKLIRRLKDLPGLTKYRRIDRE-----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A R+ G T L+ LE RLD I++R TI ARQ V HRH+LVN R Sbjct: 49 RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLDMTLTIPGARQLVCHRHILVNSRI 108 Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166 V+ SYRC DVI +K + + + + L+++ Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168 Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++++ RI + + + LV+E++SR Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214 >gi|32401860|gb|AAP80918.1| small ribosomal protein 4 [Agathis australis] Length = 207 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 38/207 (18%) Query: 34 PGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89 PGL RR K K S + ++L KQK++ +YG +++++ + A R+ G T L+ Sbjct: 3 PGLTKYRRIDREKEKKSRYRIRLEEKQKLRFHYG-LTDRQLLQYVRIARRAEGSTGEVLL 61 Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 LE RLD I++R TI ARQ V HRH+LVNGR V+ SYRC DVI +K + + Sbjct: 62 QLLEMRLDNIIFRLGMTLTIPGARQLVCHRHILVNGRIVDKPSYRCNPYDVITIKDQQRS 121 Query: 150 LASVLEASQLAERDVPE------------------------------YISVNHDNMVATF 179 + + L+++ +++++ Sbjct: 122 RNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKKQEMRQYSQIHLTLDPFRYKGVV 181 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + + LV+E++SR Sbjct: 182 NRIIDITR---INLNINELLVIEYFSR 205 >gi|111283702|gb|ABH09201.1| small ribosomal protein 4 [Geocalyx caledonicus] Length = 142 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 10/150 (6%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 +PKS RS K S + ++L KQK++ +YG ++E++ + A ++ Sbjct: 2 LKPKSSYIDRSI--------SNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKA 52 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 +G T L+ LE RLD ++R PTI ARQ VNHRH+ +N +V+I SY C+ GD+ Sbjct: 53 KGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVDIPSYNCEPGDI 112 Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYIS 169 I VK K K V + L ++ +P +++ Sbjct: 113 ITVKTKQKSQLIVTKNINLFQKLKIPSHLT 142 >gi|86438914|emb|CAJ55429.1| small ribosomal protein 4 [Plagiochila pleurata] Length = 135 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 4/139 (2%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 + KI RR+G K+ + SY + K S + ++L KQK++ +YG ++E Sbjct: 1 RVKIIRRLGXLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + A +++G T L+ LE RLD ++R PTI ARQ VNHRH+ +N Sbjct: 57 RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGXXPTIPGARQLVNHRHISINNDI 116 Query: 128 VNIGSYRCKEGDVIEVKQK 146 V+I SY C+ GD+I ++ K Sbjct: 117 VDIPSYNCEPGDIITIRNK 135 >gi|60202594|gb|AAX14686.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum] Length = 140 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 4/142 (2%) Query: 66 SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 EK+ KEA R +G T L+ LE RLDT+ + F ++ ARQ VNH H+ +N Sbjct: 1 LEKQLFRYVKEARRRQGVTGLILLQLLEMRLDTLCFTLGFAKSLAQARQLVNHGHITINK 60 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPS 184 + V+I S++C+ D+I +K+KS V + + R++P ++ + + A + Sbjct: 61 KVVSIPSFQCRLNDIISIKEKSSSKTLVETNIKNNQVREIPTHLRFDTVKLGAIVLDYCD 120 Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206 + + LV+E YSR Sbjct: 121 RND---VSLQLDELLVIEHYSR 139 >gi|292559409|gb|ADE32410.1| ribosomal protein S4 [Streptococcus suis GZ1] Length = 115 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 3/112 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59 Query: 61 YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFA 111 YG + EK+FR++F +A + + T N + LE RLD +VYR T Sbjct: 60 SYG-LGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRLGLATTRRQ 110 >gi|310707258|gb|ADP08974.1| Rps4 [Lindsaea diplosora] Length = 136 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 1/135 (0%) Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A +++G T L+ LE RLD I+++ TI AARQ VNHRH+ VN R V++ Sbjct: 1 KYVRIARKTKGSTGQVLLQLLEMRLDNILFQLGLASTIPAARQLVNHRHIFVNHRIVDVP 60 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191 SYRCK D+I ++ + + + E D+P +++ + + S Sbjct: 61 SYRCKPKDIITIRHQLISYNK-MSSKSFGEGDIPHHLTASLSENNRPVGFVNSIANRECV 119 Query: 192 PVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 120 DLNINELLVVEYYSR 134 >gi|29422367|gb|AAO84579.1| small ribosomal protein 4 [Bartramia halleriana] Length = 130 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 2/128 (1%) Query: 46 SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105 S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 1 SQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGM 59 Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164 PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K A + + ++ + Sbjct: 60 APTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKI 119 Query: 165 PEYISVNH 172 P +++ N Sbjct: 120 PNHLTYNS 127 >gi|305672205|gb|ADM63526.1| ribosomal protein S4 [Goodenia ovata] Length = 141 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 9/150 (6%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 K RR+G KS + R P K S + ++L+ KQ+M +YG ++E++ Sbjct: 1 KKIRRLGTLPGLSTKSECDLRKKPP-------PWKQSQYFIRLKEKQRMSLHYG-LTERQ 52 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A +++G+TS L+ LE RLD I++R V T+ ARQ V HRH+LVNGR V+ Sbjct: 53 LLKYVRIAGKAKGETSRVLLQLLEMRLDNILFRLGMVTTLPGARQLVTHRHILVNGRIVD 112 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 I SYRCK D IE + + A + + Sbjct: 113 IPSYRCKPQDTIEARDD-QSRALIQKYIAA 141 >gi|296399261|gb|ADH10436.1| ribosomal protein S4 [Selaginella moellendorffii] gi|296399281|gb|ADH10456.1| ribosomal protein S4 [Selaginella moellendorffii] Length = 193 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 15/203 (7%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR G + K P Y + +K + ++ KQ+ + Sbjct: 1 MSRHRGPRAKIVRRPGRSPGPTRKRPNKKPGYA---NQSTPTTKAPPYRIRSEEKQRSRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 ++G +E++ + A R++G T + LE+R D I+ R TI ARQ V H H Sbjct: 58 HHGP-TEQQSLRYVRLARRAKGSTGQVSLQSLETRSDNIIPRLGMASTIPGARQSVTHEH 116 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 N ++NI SYR + D I V+Q + S + + + V Sbjct: 117 TPANDHAINIPSYRREPTDAIAVRQPFRGGNSSNRIGEQNDSTLYP--------RAGLAV 168 Query: 181 RIPSSLKDVPYPVIMQPNLVVEF 203 + VE+ Sbjct: 169 QPVDRK---WIDPNTNELPAVEY 188 >gi|32401840|gb|AAP80908.1| small ribosomal protein 4 [Podocarpus matudae var. reichei] Length = 217 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 38/214 (17%) Query: 30 RSYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85 R+ PGL RR K K S + ++L KQK++ +YG +++++ + A R++G T Sbjct: 3 RNNLPGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGSTG 61 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 L+ LE RLD I++R TI ARQ VNHRH+LVNGR V+I SYRC DVI +K Sbjct: 62 QVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITIKD 121 Query: 146 KSKQLASVLEASQLAER------------------------------DVPEYISVNHDNM 175 + + + + + L+++ P +++++ Sbjct: 122 RQRSMNIITKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFMKHTXPFHLTLDSXRY 181 Query: 176 VATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206 I + + D + + V+E +SR Sbjct: 182 KGVVKYKGIVNRIIDSTGIGLNINELXVIENFSR 215 >gi|270356482|gb|ACZ80496.1| ribosomal protein 4 [Ephedra major subsp. procera] Length = 158 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 9/162 (5%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + + L+ KQK++ +YG ++E++ R A ++G T L+ LE RLD I++R Sbjct: 1 KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161 TI ARQ VNHRH+LVN V+I SYRCK D+I +K K + + + Sbjct: 60 GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119 Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 VP Y++ N +I + + ++ LV Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEMLV 158 >gi|107770432|gb|ABF83757.1| small ribosomal protein 4 [Taxus cuspidata] Length = 175 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 8/178 (4%) Query: 12 DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71 R+ K P R P + KPS + ++L+ KQ+++ +YG ++E++ Sbjct: 1 INRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRFHYG-LTERQLL 57 Query: 72 SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + A RS+G T L+ LE RLD I++R TI ARQ V+HRH+LVN R V+I Sbjct: 58 QYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRHILVNDRIVDIP 117 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPS 184 SYRCK D+I +K + + + + L++RD VP ++++ + +I Sbjct: 118 SYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQYIGLVKKIID 175 >gi|119898662|ref|YP_933875.1| partiell 30S ribosomal protein S4, truncated [Azoarcus sp. BH72] gi|152060921|sp|A1K833|RS4L_AZOSB RecName: Full=Ribosomal protein S4-like protein gi|119671075|emb|CAL94988.1| partiell 30S ribosomal protein S4, truncated [Azoarcus sp. BH72] Length = 115 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 2/109 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59 MS+ + KI R +G +L G + + R+ PG HG R+ ++ S FGLQL KQK++ Sbjct: 1 MSRYTGPRLKIMRALGVDLPGLGRKSMQERNQPPGQHGARKVAARKSEFGLQLMEKQKLR 60 Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108 YG ++E++ R + +A R +G T ++ LE RLD +V+RA F PT Sbjct: 61 YNYG-VTERQLRRVVLDAKRQKGVTGGKIVELLERRLDNLVFRAGFAPT 108 >gi|29422403|gb|AAO84597.1| small ribosomal protein 4 [Philonotis vescoana] Length = 139 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 ++ K S + ++L QK++ +YG I+E++ + + A +++G T L+ LE R Sbjct: 7 INQSTSNKKISQYRIRLEENQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 65 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +++R PTI ARQ VNHRH+LVN R V+I SYRCK D I +K + K A + + Sbjct: 66 LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITIKDRQKSQAIISK 125 Query: 156 ASQLAER-DVPEYI 168 ++ +P ++ Sbjct: 126 NIDFYQKYKIPNHL 139 >gi|190361227|gb|ACE76918.1| ribosomal protein small subunit 4 [Polyphlebium angustatum] Length = 173 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 9/159 (5%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 + + K S F ++L+AKQK++ YG +E++ + A R++G T L+ LE R Sbjct: 16 IRSATDQRKISQFCVRLQAKQKLRFNYGS-TERQLLKYVRIARRAKGSTGQVLLQLLEMR 74 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS----KQLA 151 LDTIVY+ PTI +ARQ VNHRH+LVN V+I SYRCK D+I +K +S K+ + Sbjct: 75 LDTIVYQLGMAPTIPSARQLVNHRHILVNNHIVDIPSYRCKPKDLITLKSRSSLSYKEQS 134 Query: 152 SVLEASQLAERDVPEYISVNHDN----MVATFVRIPSSL 186 ++ + P++++V+ D I + Sbjct: 135 TLKLLYTSWTKKRPDHLTVSSDEGKRPKEGLVNAIANRE 173 >gi|32401894|gb|AAP80935.1| small ribosomal protein 4 [Platycladus orientalis] Length = 199 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 11/201 (5%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70 + R+ K+P R P + KP + ++L+ Q+++ +YG + E++ Sbjct: 3 LISRLKTLPGLSKKTP--NRIKKPIKKKHFKPIKPXKYPVRLKEXQRLRFHYG-LPERQL 59 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + A R++G T + LE RLD I++R TI ARQ VNHRH+LV GR V I Sbjct: 60 LQYVRIARRAKGSTGQVXLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVXGRIVXI 119 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSS 185 SYRCK D+I +K+K + + ++D P +++ +I Sbjct: 120 PSYRCKPQDLIXIKEKEGSKNRIKKNXDXFQKDKXRXPPHLNRIKQKSXYXGLVKKIXDX 179 Query: 186 LKDVPYPVIMQPNLVVEFYSR 206 + + + LV +YSR Sbjct: 180 KRX---GLKINELLVXXYYSR 197 >gi|78102715|gb|ABB21571.1| small ribosomal protein 4 [Plagiochila ramosissima] Length = 124 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Query: 46 SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105 S + ++L KQK++ +YG ++E++ + A +++G T L+ LE RLD ++R Sbjct: 2 SQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGM 60 Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164 PTI ARQ VNHRH+ +N V+I SY C+ GD+I ++ K K + V + ++ + Sbjct: 61 SPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKI 120 Query: 165 PEYI 168 P ++ Sbjct: 121 PNHL 124 >gi|270356494|gb|ACZ80502.1| ribosomal protein 4 [Ephedra sarcocarpa] Length = 157 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 9/161 (5%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + + L+ KQK++ +YG ++E++ R A ++G T L+ LE RLD I++R Sbjct: 1 KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161 TI ARQ VNHRH+LVN V+I SYRCK D+I +K K + + + Sbjct: 60 GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119 Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199 VP Y++ N +I + + ++ L Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEML 157 >gi|32401892|gb|AAP80934.1| small ribosomal protein 4 [Thujopsis dolabrata] Length = 195 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 10/193 (5%) Query: 19 LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78 L G K N R P + KPS + +L+ KQ+++ +YG + ++ + A Sbjct: 6 LPGLSKKTSN-RIKKPIKKKHSKPIKPSKYPXRLKEKQRLRFHYG-LPXRQLLQYVRIAR 63 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++G T + LE RLD I++R TI ARQ VNHRH+LV GR VNI SYR K Sbjct: 64 RAKGSTGQVXLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVXGRIVNIPSYRXKPQ 123 Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISV--NHDNMVATFVRIPSSLKDVPYPV 193 D+I +K+ + + + +D P +++ A +I + + + Sbjct: 124 DLISIKENQGLINIINKNRDXFXKDNMRXPPHLNXINKKSQYXALVNKIIDNKR---IGL 180 Query: 194 IMQPNLVVEFYSR 206 + LV +YSR Sbjct: 181 XINELLVXXYYSR 193 >gi|255961340|ref|YP_003097522.1| ribosomal protein S4 [Selaginella moellendorffii] gi|255961359|ref|YP_003097541.1| ribosomal protein S4 [Selaginella moellendorffii] gi|254941512|gb|ACT89027.1| ribosomal protein S4 [Selaginella moellendorffii] gi|254941531|gb|ACT89046.1| ribosomal protein S4 [Selaginella moellendorffii] Length = 194 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 15/202 (7%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR G + K P Y + +K + ++ KQ+ + + Sbjct: 2 SRHRGPRAKIVRRPGRSPGPTRKRPNKKPGYA---NQSTPTTKAPPYRIRSEEKQRSRFH 58 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 +G +E++ + A R++G T + LE+R D I+ R TI ARQ V H H Sbjct: 59 HGP-TEQQSLRYVRLARRAKGSTGQVSLQSLETRSDNIIPRLGMASTIPGARQSVTHEHT 117 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181 N ++NI SYR + D I V+Q + S + + + V+ Sbjct: 118 PANDHAINIPSYRREPTDAIAVRQPFRGGNSSNRIGEQNDSTLYP--------RAGLAVQ 169 Query: 182 IPSSLKDVPYPVIMQPNLVVEF 203 VE+ Sbjct: 170 PVDRK---WIDPNTNELPAVEY 188 >gi|11467160|ref|NP_054461.1| ribosomal protein S4 [Marchantia polymorpha] gi|417729|sp|P26866|RT04_MARPO RecName: Full=Ribosomal protein S4, mitochondrial gi|250822|gb|AAB22414.1| ribosomal protein S4 [Marchantia polymorpha=liverwort, Peptide Mitochondrial, 196 aa] gi|786244|gb|AAC09458.1| rps4 [Marchantia polymorpha] Length = 196 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 10/197 (5%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 S+ K+ R+I EN+W K + + L Q++ K S F +QL+ +K+ +YG++ Sbjct: 4 SRFKVCRQILENVWQTKKLTLKQKFLISELQKQKKNKKQSDFSIQLQTIKKLSLFYGNLP 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 KK + + D ++L+ +E RLD I+ R F T+F ARQ ++H+++ VN + Sbjct: 64 IKKMQR---AKTHTYIDKKNSLLFNIEKRLDVILVRLNFCSTMFQARQLISHKNICVNYK 120 Query: 127 SVNIGSYRCKEGDVIEVKQKS----KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 VNI ++ GD+I +++ S K + R P ++ VN+ + A + Sbjct: 121 KVNIPGFQVSNGDLISIQENSLDFFKSNIRKNFQTNRIRRMKPNHLEVNYKTLKAVVLYE 180 Query: 183 PSSLKDVPYPVIMQPNL 199 P + + +P + +L Sbjct: 181 P---QQIQFPYKIDLDL 194 >gi|254437691|ref|ZP_05051185.1| hypothetical protein OA307_2561 [Octadecabacter antarcticus 307] gi|198253137|gb|EDY77451.1| hypothetical protein OA307_2561 [Octadecabacter antarcticus 307] Length = 91 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 56/88 (63%), Positives = 69/88 (78%), Gaps = 1/88 (1%) Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 NH HV VNG+ VNI SYR KEGD++EV+ SKQ +VL+A LAERDVP+Y+ V+H M Sbjct: 2 NHGHVTVNGKKVNIPSYRVKEGDIVEVRDSSKQNVAVLDAIGLAERDVPDYMDVDHSKMS 61 Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 ATFVR P L DVPYPV+M+PNLV+E+Y Sbjct: 62 ATFVRTPG-LGDVPYPVMMEPNLVIEYY 88 >gi|118577577|gb|ABL07154.1| small ribosomal protein 4 [Piper glabratum] Length = 101 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%) Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164 TI ARQ VNHRHVLVNGR V+I SYRCK D+I + + + V + A R ++ Sbjct: 1 ASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQNSMDSASREEL 60 Query: 165 PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 P++++++ +I S + + LVVE+YSR Sbjct: 61 PKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 99 >gi|89031446|gb|ABD59460.1| Rps4 [Passiflora coriacea] Length = 171 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 13/137 (9%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + S + +L+ KQ+++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 29 RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + ++ Sbjct: 88 GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSLDMI 147 Query: 158 ------QLAERDVPEYI 168 + +P ++ Sbjct: 148 KKSLDDSSPRKKLPTHL 164 >gi|262186756|ref|YP_003276015.1| ribosomal protein S4 [Pleurozia purpurea] gi|237780753|gb|ACR19399.1| ribosomal protein S4 [Pleurozia purpurea] Length = 196 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 8/194 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 S+ K+ R+I EN+W K + L + K S F +QLR +K+ +YG++ Sbjct: 4 SRFKVCRQILENVWQTKKLTLKQELLISELRKNEKNKKQSDFSVQLRTMKKLSLFYGNLP 63 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 +K + R+ D ++L+ +E RLD I+ R + T+F ARQ ++H+++ VN + Sbjct: 64 IRKMQR---AKTRTYIDKKNSLLFNIEKRLDVILVRLNYCSTMFQARQLISHQNICVNYK 120 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAE--RDVPEYISVNHDNMVATFVRI 182 VNI ++ GD+I +++ S +++ + R P ++ VN+ + A + Sbjct: 121 KVNIPGFQVSNGDLISIQENSLAFFESNIRRNLRTNRIGRMKPNHLEVNYKTLKAVVLYE 180 Query: 183 PSSLKDVPYPVIMQ 196 P + PY + + Sbjct: 181 PQQI-RFPYKIDLD 193 >gi|89031448|gb|ABD59461.1| Rps4 [Passiflora xiikzodz] gi|89031450|gb|ABD59462.1| Rps4 [Passiflora coriacea x Passiflora xiikzodz] Length = 171 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 13/137 (9%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + S + +L+ KQ+++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 29 RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157 TI ARQ VNHRH+LVN R V+I SYRCK D+I VK + K + ++ Sbjct: 88 GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKNEQKSKDMIKKSLDSLDMI 147 Query: 158 ------QLAERDVPEYI 168 + +P ++ Sbjct: 148 KKSLDDSSPRKKLPTHL 164 >gi|51458163|gb|AAU03430.1| ribosomal protein small subunit 4 [Asplenium fontanum] Length = 167 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 8/138 (5%) Query: 68 KKF-RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 +F + + R+RG T + LE RLD +++ TI AARQ VNHRH+LVN Sbjct: 20 SQFCVRLEAKQRRTRGSTGQVPLQLLEMRLDNVLFHLGMASTIPAARQLVNHRHILVNNC 79 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIP 183 V+I SYRCK D I V+ + ++ S + ++ P++++V D R+ Sbjct: 80 IVDIPSYRCKPKDFITVRNRPTSCNALRNKSLVGDKT-PDHLTVSLSEGDRPTGLVNRV- 137 Query: 184 SSLKDVPYPVIMQPNLVV 201 + + LVV Sbjct: 138 --ANRESINLNINELLVV 153 >gi|67968333|dbj|BAE00233.1| ribosomal protein S4 [Selaginella uncinata] gi|67968354|dbj|BAE00254.1| ribosomal protein S4 [Selaginella uncinata] Length = 196 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 18/205 (8%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + KI RR G + K P + K + ++ KQ+ + + Sbjct: 2 SRHRGPRAKIVRRPGRSPGPTRKRPAGRKPGYANQSTPTTK--APQYRIRSEEKQRSRLH 59 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 +G +E++ + A R++G T + E+R D I+ R T ARQ V H Sbjct: 60 HGP-TEQQSLRYVRIAKRAKGSTGQVSLQSPETRSDNIIPRLGAASTTPGARQSVTHERA 118 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM---VAT 178 N R++++ SYR K D I +Q S+ + ++++ E+ +H + Sbjct: 119 PANDRAISVPSYRRKPADAIAARQ-SRCRSVGNSSNRIGEQ--------DHSTLYPHAGL 169 Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEF 203 VR +L VE+ Sbjct: 170 AVRPVDRK---WIDPNTNESLAVEY 191 >gi|113170474|ref|YP_717265.1| Rps4 [Ostreococcus tauri] gi|112806881|emb|CAL36387.1| unnamed protein product [Ostreococcus tauri] Length = 209 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 10/200 (5%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K K R+ G LW + + + K S F LQLRAKQ + YG + Sbjct: 8 KGKPCRKFGAFLWKTRTFTIKQEKAVSLANKKVNTKKLSNFALQLRAKQLVSALYGQLKL 67 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + F+ + +++ + RG +H S LE RLD+ + + KF PT AARQ +NH+ V +NG Sbjct: 68 QHFKHLLQQSQKYRGKLAHIFFSLLEKRLDSCLVQLKFAPTFLAARQLINHKKVCINGNI 127 Query: 128 VNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAERD-----VPEYISVNHDNMVATFV 180 + K GD + + + ++V A L + P + VN+ + A F+ Sbjct: 128 ITAPGVLLKPGDSVSFIPEIQTRVASNVQTACALHDSKKVLAYKPLHFEVNYKTLEAIFL 187 Query: 181 RIPSSLKDVPYPVIMQPNLV 200 P + V YP ++P LV Sbjct: 188 FSP---QQVHYPTRIEPELV 204 >gi|33413239|emb|CAD86772.1| ribosomal protein small subunit 4 [Phascum cuspidatum] Length = 134 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 1/117 (0%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K S + ++L KQK++ +YG I+E++ + + A +++G T L+ LE RLD +++R Sbjct: 19 KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 77 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 PTI ARQ VNHRH+LVN R VNI SYRCK D I + ++ K + + + Sbjct: 78 GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINERKKSQIMITKNVDFS 134 >gi|16930560|gb|AAL31958.1| ribosomal protein small subunit 4 [Cyclosorus interruptus] Length = 120 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 + LE RLD +++ TI AARQ VNHRH+LVN V+I SYRCK D+I ++ + Sbjct: 1 PLQLLEMRLDNVIFNLGMASTIPAARQLVNHRHILVNNHIVDIPSYRCKPRDIITIRNRP 60 Query: 148 KQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 + L + P+++++ + R+ + + LVVE+Y Sbjct: 61 TSHNA-LGGESSVGVETPDHLTISLMEGNRPAGLVNRV---ANRESVNLSINELLVVEYY 116 Query: 205 SR 206 SR Sbjct: 117 SR 118 >gi|218176246|ref|YP_002364503.1| ribosomal protein S4 [Festuca arundinacea] gi|215882330|gb|ACJ70760.1| ribosomal protein S4 [Festuca arundinacea] Length = 144 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K+P G L + K + ++L+ KQK++ Sbjct: 1 MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKNKFHSGKKEQYRIRLQEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +YG ++E++ A +++ T L+ LE RLD I++R TI ARQ V Sbjct: 57 HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVK 112 >gi|11466639|ref|NP_066322.1| ribosomal protein S4 [Malawimonas jakobiformis] gi|10178677|gb|AAG13689.1|AF295546_15 ribosomal protein S4 [Malawimonas jakobiformis] Length = 225 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 117/218 (53%), Gaps = 24/218 (11%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK--- 57 M+KR K++I ++IGE+LWG+ +N + G HG+ +K + + +K Sbjct: 1 MTKRFKQKYRICKQIGEDLWGKLNKKINY-NVRSGQHGKIKKKRKEIAFIYKDNNKKKIN 59 Query: 58 ----------MKKYYGDISEKKFRSIFKE----ADRSRGDTSHNLI-SFLESRLDTIVYR 102 ++K+Y +IS+K+F ++FK+ ++ +T+ + + LE RLDTI++R Sbjct: 60 TVNKTQFIYKLRKFYSNISKKQFDNLFKKGNLLNANNKYNTNSKYLINLLERRLDTILFR 119 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + + F ARQ +NH H+L+NG VN+ S+ GD IEVK+ S++L ++ + Sbjct: 120 INWASSFFNARQLINHGHILINGNIVNVSSHLVNIGDKIEVKKDSQKLLKKNLIDRIKNK 179 Query: 163 DV----PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 + P YI VN++ + A + P+ VP+P I Sbjct: 180 QITINCPSYIEVNYNILCAIVIFNPT-ESFVPFPTIKN 216 >gi|78102723|gb|ABB21575.1| small ribosomal protein 4 [Plagiochila trapezoidea] Length = 132 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 1/124 (0%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 K S + ++L KQK++ +YG ++E++ + A +++G T L+ LE R D Sbjct: 6 STPNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDN 64 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 ++R PTI ARQ VNHRH+ +N VNI SY C+ GD+I + K K + V + Sbjct: 65 TIFRLGMSPTIPGARQLVNHRHISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKTIN 124 Query: 159 LAER 162 + Sbjct: 125 SFXK 128 >gi|190361255|gb|ACE76932.1| ribosomal protein small subunit 4 [Didymoglossum membranaceum] Length = 128 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 12/126 (9%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K S F ++L AKQ+++ YG ++E++ + + A R++G T L+ LE RLD IV++ Sbjct: 14 RKISQFCVRLEAKQRLRFNYG-LTERQLLNYIRIARRAKGSTGQVLLQLLEMRLDNIVFQ 72 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 PTI AARQ VNHRH+LVN VNI SYRCK D I +K + Sbjct: 73 LGMAPTIPAARQLVNHRHILVNNCIVNIPSYRCKPKDFITLKNH-----------DSFRK 121 Query: 163 DVPEYI 168 +P ++ Sbjct: 122 TIPNHL 127 >gi|118626063|emb|CAL41752.1| small ribosomal protein 4 [Acrobolbus wilsonii] Length = 97 Score = 98.8 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%) Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYI 168 ARQ VNHRH+ +N V+I SY C GD+I VK + K + +++ L ++ +P ++ Sbjct: 1 PGARQLVNHRHISINNDIVDIPSYNCGPGDIITVKNERKSQSMIIKNINLFQKSKMPSHL 60 Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + + + + + + LVVE+YSR Sbjct: 61 TFDSTELRGFVNQTINR---EWIDLKINELLVVEYYSR 95 >gi|206587040|emb|CAQ17624.1| hypothetical 30s ribosomal protein s4 (partial sequence c terminus) [Ralstonia solanacearum MolK2] Length = 668 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 11/102 (10%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53 M++ K K+ RR G +L+ + K ++++ PG HG+ ++ S +G QLR Sbjct: 1 MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95 KQK+K+ YG + E++FR F EADR +G+T NL+ LESR Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESR 98 >gi|224542511|ref|ZP_03683050.1| hypothetical protein CATMIT_01694 [Catenibacterium mitsuokai DSM 15897] gi|224524568|gb|EEF93673.1| hypothetical protein CATMIT_01694 [Catenibacterium mitsuokai DSM 15897] Length = 91 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNH 172 V+HR V VNG+SVN+ SY+ K GD+I + +++++ V E+ ++ + P ++ V+ Sbjct: 1 MVSHRGVTVNGKSVNLPSYQVKAGDIIALSERAQKQLRVQESLTVSSQMDLSPSWVEVDS 60 Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 F +P P + L+VE YS+ Sbjct: 61 KKFSGVFKAVPDRAD---LPADINEALIVELYSK 91 >gi|32401874|gb|AAP80925.1| small ribosomal protein 4 [Metasequoia glyptostroboides] Length = 136 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 4/125 (3%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L+ KQ+++ +YG ++E++ + A R++G T L+ LE RLD I++R ++ Sbjct: 1 LKEKQRLRFHYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALSMPE 59 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYI 168 ARQ +NHRH+ VN R V+I SYRCK D+I +K K + + + + ++D VP ++ Sbjct: 60 ARQLINHRHIRVNDRIVDIPSYRCKPQDLISIKDKQRLRNIINKNIDIFQKDKMRVPPHL 119 Query: 169 SVNHD 173 ++ Sbjct: 120 NLIKK 124 >gi|328775223|gb|AEB40007.1| ribosomal protein S4 [Funaria hygrometrica] Length = 195 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 9/194 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 S+ K R+I EN+W K ++ L + K + F +L+ QK+ +YG + Sbjct: 4 SRFKTCRQISENVWQTKKLTQKQKAIILKLRKKTNKKQS-DFSKELQTIQKLSLFYGKLP 62 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 KK + ++ D ++L+ +E RLD I+ R F TIF ARQ ++H+ + VN + Sbjct: 63 IKKMQR---SKTQTYLDKKNSLLFDIERRLDVILVRLNFCLTIFQARQLISHKKICVNYK 119 Query: 127 SVNIGSYRCKEGDVIEVKQKS----KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 VNI ++ GD+I ++ + S R P ++ VN+ + A + Sbjct: 120 MVNIPGFQLSNGDLISIQDNFLYFIRSKIRQNFQSNRIWRIKPTHLEVNYKTLKAVVLYE 179 Query: 183 PSSLKDVPYPVIMQ 196 P ++ PY + + Sbjct: 180 PQQIQ-FPYSIDLD 192 >gi|91208849|ref|YP_539010.1| Ribosomal protein S4 [Physcomitrella patens] gi|90991389|dbj|BAE93081.1| ribosomal protein S4 [Physcomitrella patens] Length = 195 Score = 96.1 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 9/194 (4%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 S+ K R+I EN+W K ++ L + K + F +L+ QK+ +YG + Sbjct: 4 SRFKTCRQISENVWQTKKLTQKQKAIILKLRKKTNKKQS-DFSKELQTIQKLSLFYGKLP 62 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 KK + ++ D ++L+ +E RLD I+ R F TIF ARQ ++H+ + VN + Sbjct: 63 IKKMQR---SKTQTYLDKKNSLLFDIERRLDVILVRLNFCLTIFQARQLISHKKICVNYK 119 Query: 127 SVNIGSYRCKEGDVIEVKQKS----KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 VNI ++ GD+I ++ + S R P ++ VN+ + A + Sbjct: 120 MVNIPGFQLSNGDLISIQDNFIYFIRSKIRQNFQSNRIWRIKPTHLEVNYKTLKAVVLYE 179 Query: 183 PSSLKDVPYPVIMQ 196 P ++ PY + + Sbjct: 180 PQQIQ-FPYSIDLD 192 >gi|141446682|gb|ABO87548.1| ribosomal protein S4 [Elymus repens] gi|141446684|gb|ABO87549.1| ribosomal protein S4 [Elymus repens] gi|141446686|gb|ABO87550.1| ribosomal protein S4 [Elymus repens] gi|141446688|gb|ABO87551.1| ribosomal protein S4 [Elymus repens] gi|141446690|gb|ABO87552.1| ribosomal protein S4 [Elymus repens] gi|141446692|gb|ABO87553.1| ribosomal protein S4 [Elymus repens] gi|141446694|gb|ABO87554.1| ribosomal protein S4 [Elymus repens] gi|141446696|gb|ABO87555.1| ribosomal protein S4 [Elymus repens] gi|141446698|gb|ABO87556.1| ribosomal protein S4 [Taeniatherum caput-medusae] gi|141446700|gb|ABO87557.1| ribosomal protein S4 [Elymus semicostatus] gi|141446702|gb|ABO87558.1| ribosomal protein S4 [Hordeum bogdanii] gi|141446704|gb|ABO87559.1| ribosomal protein S4 [Elymus sibiricus] gi|141446706|gb|ABO87560.1| ribosomal protein S4 [Elymus transhyrcanus] gi|141446708|gb|ABO87561.1| ribosomal protein S4 [Elymus alaskanus] gi|141446710|gb|ABO87562.1| ribosomal protein S4 [Elymus mutabilis] gi|141446712|gb|ABO87563.1| ribosomal protein S4 [Elymus fibrosus] gi|141446714|gb|ABO87564.1| ribosomal protein S4 [Elymus transbaicalensis] gi|141446716|gb|ABO87565.1| ribosomal protein S4 [Elymus repens] gi|141446718|gb|ABO87566.1| ribosomal protein S4 [Thinopyrum intermedium] gi|141446720|gb|ABO87567.1| ribosomal protein S4 [Pseudoroegneria spicata] gi|141446722|gb|ABO87568.1| ribosomal protein S4 [Thinopyrum junceum] gi|141446724|gb|ABO87569.1| ribosomal protein S4 [Thinopyrum intermedium] gi|141446726|gb|ABO87570.1| ribosomal protein S4 [Hordeum stenostachys] gi|141446728|gb|ABO87571.1| ribosomal protein S4 [Elymus repens] gi|141446730|gb|ABO87572.1| ribosomal protein S4 [Elymus repens] gi|141446732|gb|ABO87573.1| ribosomal protein S4 [Elymus repens] gi|141446734|gb|ABO87574.1| ribosomal protein S4 [Elymus repens] gi|141446736|gb|ABO87575.1| ribosomal protein S4 [Elymus repens] gi|141446738|gb|ABO87576.1| ribosomal protein S4 [Elymus repens] gi|141446740|gb|ABO87577.1| ribosomal protein S4 [Elymus repens] gi|141446742|gb|ABO87578.1| ribosomal protein S4 [Elymus repens] gi|141446745|gb|ABO87579.1| ribosomal protein S4 [Hordeum vulgare] gi|141446749|gb|ABO87581.1| ribosomal protein S4 [Elymus repens] gi|141446751|gb|ABO87582.1| ribosomal protein S4 [Elymus repens] gi|141446753|gb|ABO87583.1| ribosomal protein S4 [Elymus repens] Length = 99 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K + ++L+ KQK++ +YG ++E++ A +++ T L+ LE RLD I++R Sbjct: 3 KKEQYRIRLQEKQKLRFHYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRL 61 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 TI ARQ VNHRH+LVNGR VNI S+RCK D+I Sbjct: 62 GMASTIPGARQLVNHRHILVNGRIVNIPSFRCKPRDII 99 >gi|42794668|gb|AAS45731.1| Rps4 [Psammisia dolichopoda] Length = 142 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 1/99 (1%) Query: 47 YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 + ++L+ KQK++ +YG ++E++ + A +++G T L+ LE RLD I++R Sbjct: 45 QYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMA 103 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 TI ARQ VNHRHVLVNGR ++I SYRCK D+I ++ Sbjct: 104 STIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIITARK 142 >gi|302824443|ref|XP_002993864.1| hypothetical protein SELMODRAFT_137695 [Selaginella moellendorffii] gi|302824531|ref|XP_002993908.1| hypothetical protein SELMODRAFT_137752 [Selaginella moellendorffii] gi|300138231|gb|EFJ05005.1| hypothetical protein SELMODRAFT_137695 [Selaginella moellendorffii] gi|300138275|gb|EFJ05049.1| hypothetical protein SELMODRAFT_137752 [Selaginella moellendorffii] Length = 204 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 17/194 (8%) Query: 11 IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMKKYYGDISEKK 69 I RR G + K P PG Q + + ++ KQ+ + ++G +E++ Sbjct: 1 IVRRPGRSPGPTRKRPNKK----PGYANQSTPTTKAPPYRIRSEEKQRSRFHHGP-TEQQ 55 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + A R++G T + LE+R D I+ R TI ARQ V H H N ++N Sbjct: 56 SLRYVRLARRAKGSTGQVSLQSLETRSDNIIPRLGMASTIPGARQSVTHEHTPANDHAIN 115 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189 I SYR + D I V+Q + S + + + V+ Sbjct: 116 IPSYRREPTDAIAVRQPFRGGNSSNRIGEQNDSTLYP--------RAGLAVQPVDRK--- 164 Query: 190 PYPVIMQPNLVVEF 203 VE+ Sbjct: 165 WIDPNTNELPAVEY 178 >gi|141446755|gb|ABO87584.1| ribosomal protein S4 [Dasypyrum villosum] Length = 99 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K + ++L+ KQK++ +YG ++E++ A +++ T L+ LE RLD I++R Sbjct: 3 KKEQYRIRLQEKQKLRFHYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRL 61 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 TI ARQ VNHRH+LVNG VNI S+RCK D+I Sbjct: 62 GMASTIPGARQLVNHRHILVNGHIVNIRSFRCKPRDII 99 >gi|38638300|ref|NP_943664.1| ribosomal protein S4 [Chara vulgaris] gi|32966614|gb|AAP92197.1| ribosomal protein S4 [Chara vulgaris] Length = 189 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 7/195 (3%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 SK K R+I EN+W K + +++ +K F +L+A +K+ +YG Sbjct: 1 MRVSKFKTCRQILENVWQTKKLTQKQQKILS--KARKKTNKAGEFSQKLQAIKKLSIFYG 58 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 ++ KK + + D +L+ +E RLD ++ R F TIF ARQ ++H+ + V Sbjct: 59 NLPVKK----VAKKTYTYLDKQKSLLLLMEKRLDILLVRMNFCSTIFTARQLISHKKICV 114 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183 N + + S++ GD+I ++Q K ++ P ++ VN+ ++A + P Sbjct: 115 NNQIILRPSFQVSSGDLISIQQNCKSTIKQNIRYNRIFKNKPSHLEVNYQTLMAVLLYEP 174 Query: 184 SSLKDVPYPVIMQPN 198 ++ PY + + Sbjct: 175 QQIQ-FPYHIDLDVL 188 >gi|141446747|gb|ABO87580.1| ribosomal protein S4 [Elymus repens] Length = 99 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 1/98 (1%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 K + ++L+ KQK++ +YG ++E++ A +++G T L+ LE RLD I++R Sbjct: 3 KKEQYRIRLQEKQKLRFHYG-LTERRLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRL 61 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 TI ARQ VNHRH+LVNGR VNI S+RCK D+I Sbjct: 62 GMASTIPGARQLVNHRHILVNGRIVNIPSFRCKPRDII 99 >gi|89147834|gb|ABD62765.1| ribosomal protein 4 [Metzgeria liebmanniana] Length = 126 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 75/126 (59%), Gaps = 2/126 (1%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K S + ++L +Q ++ +YG ++E++ + A R++G T L+ LE RLD I++ Sbjct: 2 NKKISQYRVRLEGRQXLRFHYG-LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIF 60 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLA 160 R VPTI AARQ VNH H+ +N V+I SY C+ GD+I +K + + + ++E + L Sbjct: 61 RLGMVPTIPAARQLVNHGHISINKDIVDIPSYNCELGDIITIKNQERYRSXIMERXNSLQ 120 Query: 161 ERDVPE 166 + +P Sbjct: 121 QPGIPN 126 >gi|218660338|ref|ZP_03516268.1| 30S ribosomal protein S4 [Rhizobium etli IE4771] Length = 75 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 58/74 (78%), Positives = 66/74 (89%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYGDISEKKFRSIF 74 YYGD+ EK+FR+IF Sbjct: 61 YYGDLREKQFRAIF 74 >gi|56554835|gb|AAV97983.1| Rps4 [Pteridium aquilinum subsp. feei] Length = 102 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 7/104 (6%) Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP 165 TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S L E+ +P Sbjct: 1 ASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESLLGEK-IP 59 Query: 166 EYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++++++ RI + + LVVE+YSR Sbjct: 60 DHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 100 >gi|229315915|ref|YP_002860141.1| ribosomal protein S4 [Micromonas sp. RCC299] gi|226431200|gb|ACO55605.1| ribosomal protein S4 [Micromonas sp. RCC299] Length = 239 Score = 88.4 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 35/221 (15%) Query: 1 MSKRESS-KHKIDRRIGENLWG----RPKSPVNTRSYGPGLHGQR----RKSKPSYFGLQ 51 M+K S + K+ R+IG +LW K Q RK K + F Q Sbjct: 1 MTKISSPFRMKVLRKIGVSLWPWRHMTLKQVEKLDKIVQKQSKQTSLLERKKKRTQFAYQ 60 Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L+AKQ +K YG+++ F S +K++ + G ++ N S LE RLD I+YRA FV + Sbjct: 61 LQAKQIVKALYGNLNTSYFISFYKKSLKMIGKSNINFFSQLERRLDCILYRANFVTSFQE 120 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV------------------ 153 ARQ ++H+ V VN +N Y K GD+I K ++ Sbjct: 121 ARQVISHQKVCVNTVKINKPGYIVKPGDIISFVSDIKDTQALSITNFLNRPATIKALNDK 180 Query: 154 -----LEASQLAERDV---PEYISVNHDNMVATFVRIPSSL 186 L+ V P ++ +N+ + ++ P L Sbjct: 181 GSLQSKNNRALSPTKVFYKPVHLEINYHTLTIVYLYTPQQL 221 >gi|110225639|ref|YP_665646.1| ribosomal protein S4 [Nephroselmis olivacea] gi|6066154|gb|AAF03172.1|AF110138_4 ribosomal protein S4 [Nephroselmis olivacea] Length = 238 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 1/147 (0%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 Q+ + K S + Q +Q + YG+I +K+ ++ +A R +G LI+ LESRLD Sbjct: 75 QKNEQKESDYFSQFTTRQTLSSIYGNIQKKQMNNLVNQAFRRKGHAGSRLITLLESRLDV 134 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE-VKQKSKQLASVLEAS 157 I+YRA F +IF ARQ +NH ++VNG N + GD++ V L + +++ Sbjct: 135 ILYRASFCTSIFTARQLINHNKIMVNGIISNSSALLLSPGDIVSVVHNYEMTLKNSIKSI 194 Query: 158 QLAERDVPEYISVNHDNMVATFVRIPS 184 Q + P Y+ ++++ M F+ P+ Sbjct: 195 QKKNLNKPNYLEISYNLMTIVFLYAPT 221 >gi|157154427|gb|ABV24920.1| ribosomal protein small subunit 4 [Asplenium viride] Length = 101 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 7/103 (6%) Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE 166 TI AARQ VNHRH+LVN V+I SYRCK D+I V+ + ++ S + ++ P+ Sbjct: 1 STIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSLVGDKT-PD 59 Query: 167 YISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +++V D R+ + + LVVE+YSR Sbjct: 60 HLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 99 >gi|110598112|ref|ZP_01386390.1| Ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031] gi|110340244|gb|EAT58741.1| Ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031] Length = 84 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M++ S K+ RR+G L + + + R + PG HGQ RK K S + LQLR KQKMK Sbjct: 1 MARFRGSITKVSRRLGVALTPKAEKYLERRPFPPGQHGQSRKGKVSEYALQLREKQKMKY 60 Query: 61 YYGDISEKKFRSIFKE 76 YG I EK+FR+ F + Sbjct: 61 IYG-ILEKQFRNYFMK 75 >gi|224922583|emb|CAQ19274.1| ribosomal S4 protein [Lomariopsis sp. F042] Length = 100 Score = 84.6 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 5/101 (4%) Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEY 167 TI AARQ VNHRH+LVN V+I SYRCK D+I ++ +S + L + A +P++ Sbjct: 1 TIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRSTSY-NALRVTSPAGDKIPDH 59 Query: 168 IS--VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ ++ DN A V + + LVVE+YSR Sbjct: 60 LTISLSEDNKPAGLVNCI--ANRESVNLNINELLVVEYYSR 98 >gi|116335038|ref|YP_802533.1| ribosomal protein S4 [Candidatus Carsonella ruddii PV] gi|122940454|sp|Q05FK4|RS4_CARRP RecName: Full=30S ribosomal protein S4 gi|116235319|dbj|BAF35167.1| ribosomal protein S4 [Candidatus Carsonella ruddii PV] Length = 197 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 6/150 (4%) Query: 1 MSKRESSKHKIDRRIGENL-WGRPKSPVN--TRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57 M+K++S K RR GENL + K + + PG +G K K S FGL LR KQK Sbjct: 1 MTKKKSKNIKFCRREGENLEFFSEKKYLEKSRSNLTPGENG-TEKGKVSDFGLILRTKQK 59 Query: 58 MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 +K+YY I EK+F+ I+ ++ + +LI+FLE RLD ++YR F + +RQ + Sbjct: 60 IKRYYC-IFEKEFKKIYFIIKKNFFNN-IDLINFLERRLDNVIYRFNFSISRKESRQLII 117 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 H +V VN I SY GDVI + +K Sbjct: 118 HGNVFVNYFKNKIPSYLLSPGDVITINKKF 147 >gi|110598113|ref|ZP_01386391.1| 30S ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031] gi|110340245|gb|EAT58742.1| 30S ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031] Length = 83 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%) Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFV 180 ++NG+ VNI SY GD+IE +Q+SK + +V ++ A E +P +I V+ N + F+ Sbjct: 1 MINGKKVNIPSYLVSPGDLIEFRQRSKNMDAVTDSLNKAPESRIPTWIQVDKANQKSVFL 60 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 +P ++ LVVE YS+ Sbjct: 61 SVPERVE---IQEPYNEQLVVELYSK 83 >gi|11466566|ref|NP_066456.1| ribosomal protein S4 [Rhodomonas salina] gi|10444153|gb|AAG17727.1|AF288090_3 ribosomal protein S4 [Rhodomonas salina] Length = 206 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 93/169 (55%), Gaps = 4/169 (2%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98 +++ + S FG L+ KQ ++ +Y +I EK F+ K A +S T IS LE RLD Sbjct: 38 RKKFRRVSNFGKLLQTKQNLRFFYCNIKEKVFKKQLKNAIKSPLKTVDKFISILEKRLDI 97 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---E 155 I++RA F+ +++ A+Q ++H H+++N +++ + + K+ D I++K + ++ + Sbjct: 98 ILFRASFIFSLYQAKQIISHGHIMINNKTIYKLNKKLKQFDFIKLKIEKNKILKRIFDRF 157 Query: 156 ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204 ++ E+ +P ++ V+ N F+ P S ++ YP+ V +Y Sbjct: 158 KDKILEKTIPVHLEVSFKNFTICFL-WPPSFFELYYPIKNDFAKVTRYY 205 >gi|167463872|ref|ZP_02328961.1| RpsD [Paenibacillus larvae subsp. larvae BRL-230010] Length = 82 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 4/86 (4%) Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 + VNG+ V+I SY+ GDVI ++++S+ L S+ EA + +P Y+ N + F+ Sbjct: 1 MTVNGKKVDIASYQVSVGDVIGLRERSRNLKSIKEALE-NRNFLPAYLEFNEQALEGKFI 59 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+P + + +VEFYSR Sbjct: 60 RLPERSE---LAQEIDEKQIVEFYSR 82 >gi|186920132|ref|YP_001874786.1| ribosomal protein S4 [Hemiselmis andersenii] gi|186461078|gb|ACC78240.1| ribosomal protein S4 [Hemiselmis andersenii] Length = 275 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 14/164 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK------SPVNTRS----YGPGLHGQRRKSKPSYFGL 50 M+KR +SK K+ + N+ G K + RS + +++ ++ S FG Sbjct: 1 MTKRLNSKFKVCK----NIKGNRKNLWAVVRAITFRSIRILKPDSISVKQKLNRISSFGK 56 Query: 51 QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 L KQ + K+Y +ISEK F+S+ ++A++S+ T LIS LESRLD ++YR+ FV ++ Sbjct: 57 YLNGKQNLIKFYCNISEKLFQSLLQQAEKSKPKTIDKLISLLESRLDVVLYRSGFVNSLH 116 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 ARQ +NH + +N ++V + K GD++E+K+ + Sbjct: 117 MARQLINHGFICINSKTVYNLNITLKSGDIVEIKRDFPIKELIT 160 >gi|7707685|dbj|BAA95356.1| ribosomal protein S4 [Clostridium perfringens] Length = 80 Score = 78.0 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 VNG+ V+I S++ DVI V +KS+ ++ + +P+++ N +N V Sbjct: 1 VNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENP-KALPKWLEANVENFEGKVVAE 59 Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206 P+ +D+ PV L+VE YS+ Sbjct: 60 PAR-EDIDVPV--NETLIVELYSK 80 >gi|301500949|ref|YP_003795414.1| ribosomal protein S4 [Alveolata sp. CCMP3155] gi|300069495|gb|ADJ66602.1| ribosomal protein S4 [Chromerida sp. RM11] Length = 207 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 19/167 (11%) Query: 51 QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 +L KQ+++ ++ +++ + + E + G + L+ L RLD+ +++ F +I Sbjct: 42 RLIEKQRLRYHHS-LTQSQVKRYVAETRKYPGPSGLALLCELAMRLDSFLFQVGFAVSIR 100 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV---------------LE 155 ++RQ + H HV VNGR V++ YRCK+GD+I + + + V Sbjct: 101 SSRQLIRHGHVFVNGRVVSLPGYRCKQGDLICIAPRVESRRLVSRHVLATRTKRAANTFN 160 Query: 156 ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 S A V EY V N+ +R + + + + P LV+E Sbjct: 161 KSFSALTPVSEYAKVCPRNLKILVLRNIKPRELL---LKVDPMLVLE 204 >gi|326565700|gb|EGE15863.1| 30S ribosomal protein S4 [Moraxella catarrhalis 12P80B1] Length = 65 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Query: 140 VIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 +I V +KSK + A +LA +R +P ++ V+H + F P + P + N Sbjct: 1 MIAVHEKSKDQLRIKNAVELATQRGIPAWLEVDHSKLQGAFKSAPERSE---LPAEINEN 57 Query: 199 LVVEFYSR 206 L+VE YS+ Sbjct: 58 LIVELYSK 65 >gi|150406488|ref|YP_001315127.1| ribosomal protein S4 [Chlorokybus atmophyticus] gi|126507725|gb|ABO15122.1| ribosomal protein S4 [Chlorokybus atmophyticus] Length = 267 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 65/255 (25%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYG-PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 K K RRI + +W K + + R K S + +L A+QK+ YG++ Sbjct: 8 KFKTCRRIQKKIWDSRKLTLKQENILLKAQVSPRGFEKQSNYSKELIARQKLSAIYGNLK 67 Query: 67 EKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 F +FK+ R+R +S LE RLD ++ R K+ T+ ARQ ++H+ +LVN Sbjct: 68 RDTFIKLFKKGRRARQVKLPDTFLSLLERRLDVVLLRLKYCSTLSEARQLISHKKILVNN 127 Query: 126 RSVNIGSYRCKEGD---------------------------------------------- 139 +VNI SY K GD Sbjct: 128 ETVNISSYLLKNGDLISIPRQELDNIKEKIFKNWTPAIGNYHGSMVGNTEFAQTSNKKKI 187 Query: 140 ----VIEVKQKSKQLASVLEASQLAERD----------VPEYISVNHDNMVATFVRIPSS 185 + K + R P ++ +N+ ++A F+ P Sbjct: 188 TVKLETRSRGFQKTTHLFNNIIKGGNRKNLKPDRRYLQRPTHLEINYKTLMAVFIHSPHQ 247 Query: 186 LKDVPYPVIMQPNLV 200 + +P+ + +L+ Sbjct: 248 ---IRWPIDINRDLI 259 >gi|50261300|ref|YP_052908.1| ribosomal protein S4 [Saprolegnia ferax] gi|48237613|gb|AAT40662.1| ribosomal protein S4 [Saprolegnia ferax] Length = 266 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK--EADRSRGDTSHNLISFLESRL 96 +R + K + +L AKQ+ K +YG I E + +++F + + + H I LESRL Sbjct: 86 KRPEKKQKLYKERLFAKQQFKNFYGCIPEYQLKNLFNYLKNRNNNNNIIHKFIIVLESRL 145 Query: 97 DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS--------- 147 D I++R+K TIF A+Q +NH + VN + + +Y K GD+I + Sbjct: 146 DMIIFRSKIAKTIFEAKQIINHGKIKVNNKIITSSNYILKRGDIITLNNFKILKKFYYLK 205 Query: 148 --KQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 K E + ++ YI N+ + F+R P K++ YP + LV EF Sbjct: 206 KKKNFQKSYELIKTVRKNKVNYIQFNNKYNICIFLRQPL-FKEIKYPFDLDLKLVDEF 262 >gi|114329658|ref|YP_740477.1| ribosomal protein S4 [Citrus sinensis] gi|113952624|gb|ABI49022.1| ribosomal protein S4 [Citrus sinensis] Length = 116 Score = 75.3 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLES 94 +YG ++E++ ++F ++ +G ++L+ Sbjct: 57 HYG-LTERQLLNMFVSPEKPKGQPVWFYYNYLKC 89 >gi|10802791|gb|AAG23617.1|AF244668_1 ribosomal protein S4 [Carboxydothermus hydrogenoformans] Length = 155 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 11/151 (7%) Query: 3 KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56 + KI R G NL+ + + R+ GP G R P+ + + R K Sbjct: 7 RYTVPSXKICSREGXNLFSKXDRXDTDXXSMARRNKGPXQXGXTRPM-PTEYAPRXRXKL 65 Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT--IVYRAKFVPTIFAARQ 114 K K YG + E +F++ A+R G T N + LE R D R + ARQ Sbjct: 66 KAKXIYG-VZEVQFQTXXVMAERXXGTTGENXVVLLERRSDKHGRSDRTTL-MSRALARQ 123 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 V +N R VNI SY K G+VI K+ Sbjct: 124 VVRLNLTPLNXRQVNILSYVVKXGEVIIPKE 154 >gi|84508517|ref|YP_448680.1| ribosomal protein S4 [Dictyota dichotoma] gi|45925685|gb|AAS79066.1| ribosomal protein S4 [Dictyota dichotoma] Length = 237 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 21/206 (10%) Query: 9 HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK------MKKYY 62 K DR +G L R + L G + Y + K ++++Y Sbjct: 31 VKWDRILGV-LSSRKRRRYQKLCKNYNLVGPTSRPNQPYKYPRWYFKNSLSNGVCVRRFY 89 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 GD+ + +S+ ++ T + + LESRL +YR F ++F ++Q + H VL Sbjct: 90 GDLRFEMLKSMC-----NKAKTVDSFMKCLESRLGINLYRLGFFSSVFESKQAILHGKVL 144 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ---------LASVLEASQLAERDVPEYISVNHD 173 VNG + Y K GD+IE K + ++ + +L P +I ++ Sbjct: 145 VNGVKITFDHYILKPGDLIEFCPKFRSKLKSRMITRRKNINYSDRLKLNPTPFWIQTDYS 204 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNL 199 N+ + ++ P+ + L Sbjct: 205 NLSFIILCETNNAVFYPFRIDFDEVL 230 >gi|166092864|gb|ABY82387.1| ribosomal protein S4 [Lychnis flos-cuculi] Length = 83 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNL 88 +YG I+E++ + A +++G T L Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVL 83 >gi|118577552|gb|ABL07142.1| small ribosomal protein 4 [Peperomia rhomboidea] Length = 101 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 L Q K S + + L K+ YG + E++ + +++G Sbjct: 4 KRXVXXSSLKSQXXSXKRSQYRIXLEEXXKLXFXYG-LGERQLLRYVRIXGKAKGSXGQV 62 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 L+ LE RLD I++R TI ARQ VNHRH+LVNG Sbjct: 63 LLQILEMRLDNILFRLGMASTIPGARQLVNHRHILVNGH 101 >gi|197131012|gb|ACH47057.1| ribosomal protein S4 [Isoetes engelmannii] gi|205277648|gb|ACI02097.1| ribosomal protein S4 [Isoetes engelmannii] Length = 254 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 8/157 (5%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K RRI EN+W K + L +R++ K SYF +QLR Q++ +YG Sbjct: 15 YHLPRFKTCRRIEENVWVWQKLTEKQKHIISEL--RRKREKQSYFSVQLRTIQRLSLFYG 72 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 + K + + +L+ +LE RLD I+ F TI ARQ ++H+ + V Sbjct: 73 KSLPR------KAKKHTYLNKRKSLLYYLEKRLDVILVCTHFCSTICGARQLISHKKICV 126 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 N +VN +R GD+I + +++ L + E + Sbjct: 127 NSETVNTHGFRVSNGDLISIVEENFFLFDIREKMKTN 163 >gi|209916097|gb|ACI95892.1| ribosomal protein S4 [Isoetes engelmannii] gi|241912117|gb|ACS71780.1| ribosomal protein S4 [Isoetes engelmannii] Length = 254 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 + K RRI EN+W K + L +R++ K SYF +QLR Q++ +YG Sbjct: 18 PRFKTCRRIEENVWVWQKLTEKQKHIISEL--RRKREKQSYFSVQLRTIQRLSLFYGKSL 75 Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 + K + + +L+ +LE RLD I+ F TI ARQ ++H+ + VN Sbjct: 76 PR------KAKKHTYLNKRKSLLYYLEKRLDVILVCTHFCSTICGARQLISHKKICVNSE 129 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 +VN +R GD+I + +++ L + E + Sbjct: 130 TVNTHGFRVSNGDLISIVEENFFLFDIREKMKTN 163 >gi|226348837|gb|ACO50741.1| ribosomal protein S4 [Micromonas pusilla CCMP1545] Length = 261 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 19/171 (11%) Query: 8 KHKIDRRIGENLWGRPK-------------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54 K+K R++ +W K + P + R P+++G+ L Sbjct: 6 KYKTLRQLRIPVWPWRKLNPKHTAWMAKEVRRAKKKVTKPLV--PRPPKTPTFYGMTLLR 63 Query: 55 KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 K YG + F ++F +A ++ + + LE RLD I+YRA+F + Q Sbjct: 64 ILKT--VYGPSNTSTFVNLFSKAKKTSVPSLQAFLQLLEMRLDVILYRARFATSYLQLHQ 121 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP 165 ++ H V VNG+ V GDV+ + ++ SV E+ + P Sbjct: 122 WIAHGKVCVNGQVVTTKGRLLSPGDVVSIHPQAVS--SVEESMRTFWAHAP 170 >gi|314908364|gb|ADT62129.1| ribosomal protein S4 [Isoetes engelmannii] Length = 254 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 8/157 (5%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K RRI EN+W K + L +R++ K SYF +QLR Q++ +YG Sbjct: 15 YHLPRFKTCRRIEENVWVWQKLTEKQKHIISEL--RRKREKQSYFSVQLRTIQRLSLFYG 72 Query: 64 DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123 + K + + +L+ +LE RLD I+ F TI ARQ ++H+ + V Sbjct: 73 KSLPR------KAKKHTYLNKRKSLLYYLEKRLDVILVCTHFCSTICGARQLISHKKICV 126 Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 N +VN +R GD+I + +++ L + E + Sbjct: 127 NFETVNTHGFRVSNGDLISIVEENFFLFDIREKMKTN 163 >gi|12330478|gb|AAG52776.1| ribosomal protein 4 [Pleurophascum occidentale] Length = 96 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 4/100 (4%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73 R+G K+P + ++ K S + ++L KQK++ +YG I+E++ + Sbjct: 1 RLGALPGLTNKTPQLXTNS---INQSISNKKISQYRIRLEXKQKLRFHYG-ITERQLLNY 56 Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 + A +++G T L+ LE RLD +++R PTI A Sbjct: 57 VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGAS 96 >gi|166092887|gb|ABY82402.1| ribosomal protein S4 [Atocion rupestre] Length = 82 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHN 87 +YG I+E++ + A +++G T Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQV 82 >gi|233162|gb|AAB19387.1| ribosomal protein S4 [Bacillus subtilis] Length = 57 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 M++ K+ RR+G +L G K + R Y PG HG ++ K S +GLQL+ KQK+ Sbjct: 1 MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKL 57 >gi|22550361|ref|NP_689354.1| ribosomal protein S4 [Chaetosphaeridium globosum] gi|22417027|gb|AAM96626.1|AF494279_31 ribosomal protein S4 [Chaetosphaeridium globosum] Length = 176 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 23/179 (12%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67 K KI R+IGEN+W K + + RR S S F + + +K++ +YG Sbjct: 2 KFKISRQIGENIWQTKKLTTRQKRILLKI---RRPSAKSNFFQRFQTFRKLRIFYGT--- 55 Query: 68 KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + +E RLD I+ R F + ARQ++NH + VN Sbjct: 56 ----------------KPKQSLLNMEKRLDVILVRMNFCSNLSTARQWINHGFIKVNFSK 99 Query: 128 VNIGSYRCKEGDVIEVKQKSKQL-ASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 V I S GD++ V + ++ ++ ++ ++ VN+ + + P S Sbjct: 100 VTIPSMLLTNGDIVSVCKNFIPFVKKNMQKIRVFKKHKLSHLEVNYKLCIGILLFEPQS 158 >gi|84508556|ref|YP_448603.1| ribosomal protein S4 [Fucus vesiculosus] gi|39653279|gb|AAR29298.1| ribosomal protein S4 [Fucus vesiculosus] Length = 271 Score = 71.9 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 28/187 (14%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K + L ++++YGD+ KKF+ K +S+G + LI LE RLD Sbjct: 80 NQTFKYNKWGYRNTLSILFCIRRFYGDLGHKKFKKSCKLLSKSKGSS-QKLIGNLEKRLD 138 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 +YR F +I +RQ + H ++VNG+ +N G++ ++GD +E + ++ + Sbjct: 139 VTLYRLGFFHSILYSRQAILHNKIIVNGKFINNGNFMLRKGDFVEFCPTQR--INIQASL 196 Query: 158 -------------------------QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192 L + P +I ++ N+ P+ Sbjct: 197 LSRYKHFRSFRMRMERWRLSYRFKYDLHLQPTPAWIQTDYSNLSFILTSDVEIPVVYPFR 256 Query: 193 VIMQPNL 199 M L Sbjct: 257 ANMDEAL 263 >gi|20451757|emb|CAD30547.1| ribosomal protein S4 [Listonella anguillarum] Length = 63 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 143 VKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201 +++K+K+ + + A ++AE R+ P +I V+ M TF R+P + L+V Sbjct: 2 IREKAKKQSRIKAALEVAEQREKPTWIEVDGGQMEGTFKRMPERSD---LSADINEQLIV 58 Query: 202 EFYSR 206 E YS+ Sbjct: 59 ELYSK 63 >gi|253807610|gb|ACT36188.1| ribosomal protein S4 [Helicosporidium sp. ex Simulium jonesi] Length = 342 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 63/111 (56%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103 + + F +L QK+K +YG+IS K+ ++ ++A G N S +ESRLD I+YR+ Sbjct: 46 ENNEFKNKLDCLQKLKIFYGNISTKQLLTLIRKAQNLPGFFDKNFFSLIESRLDVILYRS 105 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 F +I+ ARQ H+ +L+N + + + S K GDV+ V + S + + Sbjct: 106 NFAKSIYHARQLCYHKKILLNSKFITVPSTLLKPGDVLVVHENSIPINTNK 156 >gi|33322067|gb|AAQ06752.1|AF496096_1 30s ribosomal protein S4 [Lactobacillus delbrueckii subsp. lactis] Length = 81 Score = 71.1 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 31 SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG-DTSHNLI 89 SY PG HG + + S +G+QL KQK++ +G +SE++FR++F A + R N + Sbjct: 1 SYVPGQHGPNHRGRLSEYGMQLHEKQKLRWMFG-LSERQFRTLFVRAGKIREGQHGINFM 59 Query: 90 SFLESRLDTIVYRAKFVPTIFA 111 LE RLD +VYR T Sbjct: 60 ILLERRLDNVVYRLGLATTREQ 81 >gi|11496535|ref|NP_044545.1| ribosomal protein S4 [Toxoplasma gondii RH] gi|74828576|sp|Q9XQQ7|RR4_TOXGO RecName: Full=Apicoplast 30S ribosomal protein S4 gi|5231238|gb|AAD41132.1|U87145_1 ribosomal protein S4 [Toxoplasma gondii] Length = 198 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 +K K S F +QL KQK+K Y + E + + FK + NLI +E RLD + Sbjct: 36 KKGKTSSFRIQLLEKQKLKYNY-RLKENQIKKYFKYI---KLLKIFNLIQIIELRLDATI 91 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 +R F +I ARQ + H + +N V S+ E D+I + K + + Sbjct: 92 FRLGFAKSINQARQLITHGFIFINSILVKKPSFILTEKDLIYINPKKFTIILI 144 >gi|42905|emb|CAA23645.1| unnamed protein product [Escherichia coli] gi|147714|gb|AAA24576.1| ribosomal protein S4 [Escherichia coli] Length = 60 Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Query: 145 QKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 +K+K+ + V A +LAE R+ P ++ V+ M TF R P + +L+VE Sbjct: 1 EKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKRKPERSD---LSADINEHLIVEL 57 Query: 204 YSR 206 YS+ Sbjct: 58 YSK 60 >gi|31442364|ref|NP_852621.1| ribosomal protein S4 [Eimeria tenella strain Penn State] gi|74810536|sp|Q7YN81|RR4_EIMTE RecName: Full=Apicoplast 30S ribosomal protein S4 gi|31322456|gb|AAO40222.1| ribosomal protein S4 [Eimeria tenella] Length = 200 Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 6/147 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M + K K +R+ + +T+ + + K S++ L+L KQK+K Sbjct: 1 MLRYLGPKLKKLKRLNI----HMQPEFSTKYFILNTNKYNNKMILSFYLLELFEKQKLKF 56 Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120 + +SEK + + NLI+ +E RLD ++ + TI A+Q + H + Sbjct: 57 TFS-LSEKIIKKYILFMHK-YNYKKFNLINIIEIRLDNTIFNLGYSITIAQAKQLIIHGY 114 Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKS 147 VN + + I S+ K+GD+I + KS Sbjct: 115 FFVNFKLIKIPSFLLKKGDIITLSPKS 141 >gi|226323041|ref|ZP_03798559.1| hypothetical protein COPCOM_00813 [Coprococcus comes ATCC 27758] gi|225208608|gb|EEG90962.1| hypothetical protein COPCOM_00813 [Coprococcus comes ATCC 27758] Length = 90 Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 37/75 (49%), Positives = 46/75 (61%) Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 G T NL+ LESRLD +V+R F T ARQ V+H+ VLVNG+ VNI SY K GD Sbjct: 1 MSGMTGENLMVLLESRLDNVVFRLGFARTRREARQIVDHKQVLVNGKQVNIPSYLIKAGD 60 Query: 140 VIEVKQKSKQLASVL 154 VIE+K+ K + Sbjct: 61 VIEIKEGKKIFTEIQ 75 >gi|299830443|ref|YP_003734814.1| ribosomal protein S4 [Pythium ultimum] gi|299830496|ref|YP_003734867.1| ribosomal protein S4 [Pythium ultimum] gi|269810820|gb|ACZ43849.1| ribosomal protein S4 [Pythium ultimum] gi|269810873|gb|ACZ43902.1| ribosomal protein S4 [Pythium ultimum] gi|269812133|gb|ACZ44431.1| ribosomal protein S4 [Pythium ultimum] gi|269812186|gb|ACZ44484.1| ribosomal protein S4 [Pythium ultimum] Length = 153 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 10/152 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY-------FGLQLR 53 M+K ++KI + EN+ K + + + K F +L Sbjct: 1 MNKFR-PRNKICFQNNENIHANLKISKLNKKKWNLFKKRLKYKKEIKPEKRNRFFQKRLF 59 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRS--RGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 KQ+ K +YG I E + +++F ++ + +T N I LESRLD + R K T+F Sbjct: 60 EKQQFKNFYGCIPEYQLKNLFSNLNKKDNKINTFKNFILLLESRLDINIVRLKLAKTVFQ 119 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 ++Q +NH+ V +N + V+ ++ K+GDVI + Sbjct: 120 SKQLINHKKVKINDKIVSKPNFLLKKGDVISI 151 >gi|167946611|ref|ZP_02533685.1| 30S ribosomal protein S4 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 103 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197 + +++K+K+ + A LAE+ +++ V+ M F R+P P + Sbjct: 38 TRVSIREKAKKQVRIQGALSLAEQYGFVDWVEVDPKAMKGVFKRVPDRAD---LPAEINE 94 Query: 198 NLVVEFYSR 206 LVVE YS+ Sbjct: 95 QLVVELYSK 103 >gi|21449991|ref|NP_659253.1| ribosomal protein S4 [Laminaria digitata] gi|21425316|emb|CAC87949.1| ribosomal protein S4 [Laminaria digitata] Length = 265 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 24/185 (12%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K + L ++++YGD+S K F+ + + + LI LE RLD Sbjct: 74 NQTFKYNRISYRNTLSILLSIRRFYGDLSHKAFKRFCQPLVSLK-NPPQKLIGALEGRLD 132 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-------- 149 +YR F +I+ +RQ + H VLVNG+ + G + ++GD +E + Sbjct: 133 ISLYRLGFFHSIYYSRQSIFHNKVLVNGKKIGHGGFILQKGDYVEFCPSQRSAIRARLVA 192 Query: 150 ---------------LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 S +L P+++ ++ N+ + P+ V Sbjct: 193 RYKRFRSSHVKLERWRLSNRFKFELHLHPTPKWVQTDYSNLSFILSSDVCAPVMYPFRVD 252 Query: 195 MQPNL 199 + L Sbjct: 253 VDEAL 257 >gi|268053689|ref|YP_003289096.1| ribosomal protein S4 [Saccharina longipedalis] gi|262318309|dbj|BAI48630.1| ribosomal protein S4 [Saccharina longipedalis] Length = 265 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 24/185 (12%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K F L ++++YGD+S K F+++ K + + S LI LE RLD Sbjct: 74 NQTFKYNRISFRNTLSILLCIRRFYGDLSHKAFKNLCKPLVALK-NPSQKLIGSLEGRLD 132 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-------- 149 +YR F +I+++RQ + H VLVNG+ + G + ++GD +E +Q Sbjct: 133 ISLYRLGFFHSIYSSRQAILHSKVLVNGKKIGHGGFTLQKGDFVEFCPSHRQAIRARLVA 192 Query: 150 ---------------LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 S +L + P++I ++ N+ + P+ V Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSADVCAPVMYPFRVD 252 Query: 195 MQPNL 199 + L Sbjct: 253 VDEAL 257 >gi|268053533|ref|YP_003288892.1| ribosomal protein S4 [Saccharina japonica] gi|268053572|ref|YP_003288930.1| ribosomal protein S4 [Saccharina religiosa] gi|268053611|ref|YP_003288968.1| ribosomal protein S4 [Saccharina ochotensis] gi|268053650|ref|YP_003289045.1| ribosomal protein S4 [Saccharina diabolica] gi|262318153|dbj|BAI48478.1| ribosomal protein S4 [Saccharina japonica] gi|262318192|dbj|BAI48516.1| ribosomal protein S4 [Saccharina religiosa] gi|262318231|dbj|BAI48554.1| ribosomal protein S4 [Saccharina ochotensis] gi|262318270|dbj|BAI48592.1| ribosomal protein S4 [Saccharina diabolica] Length = 265 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 24/185 (12%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K F L ++++YGD+S K F+++ K + + S LI LE RLD Sbjct: 74 NQTFKYNRISFRNTLSILLCIRRFYGDLSHKAFKNLCKPLVALK-NPSQKLIGSLEGRLD 132 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-------- 149 +YR F +I+ +RQ + H VLVNG+ + G + ++GD +E +Q Sbjct: 133 ISLYRLGFFHSIYYSRQAILHSKVLVNGKKIGHGGFTLQKGDFVEFCPSHRQAIRARLVA 192 Query: 150 ---------------LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 S +L + P++I ++ N+ + P+ V Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSADVCAPVMYPFRVD 252 Query: 195 MQPNL 199 + L Sbjct: 253 VDEAL 257 >gi|294663004|ref|YP_003579825.1| ribosomal protein S4 [Dictyostelium citrinum] gi|162416159|sp|P0C5Y3|RT04_DICCI RecName: Full=Ribosomal protein S4, mitochondrial gi|187479911|gb|ACD12712.1| ribosomal protein S4 [Dictyostelium citrinum] Length = 325 Score = 68.8 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 5/117 (4%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L + +K+Y ++ K+F+ ++K+ + +I LE R+D I+ R+ FV +I+ Sbjct: 108 LILYRLFRKFYINLKLKQFKRLYKKYKGNEKI----IIQQLEKRIDMILLRSGFVRSIYE 163 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEY 167 ARQ +NH+H+LVNG I SY GD+I +K+ S + + + L + VPE+ Sbjct: 164 ARQLINHKHILVNGNIARIPSYTLNVGDIISIKEGSHKQNLIHRLKKILLPKVVPEH 220 >gi|145932374|ref|YP_001165423.1| ribosomal protein S4 [Phytophthora sojae] gi|110169617|gb|ABG54083.1| ribosomal protein S4 [Phytophthora sojae] Length = 153 Score = 68.8 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 60/102 (58%), Gaps = 2/102 (1%) Query: 44 KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS--RGDTSHNLISFLESRLDTIVY 101 + +F +L KQ+ + +YG I E + +++FK+ + + + + LESRLD + Sbjct: 50 RKKFFQKRLFEKQQFRNFYGCIHEYQLKNLFKKLSKKDNKINIFKKFVILLESRLDINLV 109 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 R K V TIF A+Q +NH+ + VN + +N ++ ++GD+I + Sbjct: 110 RLKLVKTIFQAKQLINHKKIKVNNKIINKPNFLLQKGDIIYI 151 >gi|406283|emb|CAA81389.1| ribosomal protein RpsD [Bordetella pertussis Tohama I] Length = 72 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191 K GDVI +++K+K+ + E+ LA +P+++ V+ M TF P Sbjct: 1 MLVKAGDVISIREKAKKQGRIRESLDLAASIGLPQWVEVDASKMTGTFKSAPDRAD---V 57 Query: 192 PVIMQPNLVVEFYSR 206 + ++VVE YSR Sbjct: 58 ARDVNESMVVELYSR 72 >gi|268164038|ref|YP_003288803.1| ribosomal protein S4 [Saccharina angustata] gi|262318348|dbj|BAI48668.1| ribosomal protein S4 [Saccharina angustata] Length = 265 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 24/185 (12%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K + L ++++YGD+S K F+++ K + + LI LE RLD Sbjct: 74 NQTFKYNRISYRNTLSILLCVRRFYGDLSHKAFKNLCKPLVALK-NPPQKLIGSLEGRLD 132 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ------------ 145 +YR F +I+ +RQ + H VLVNG+ + G + ++GD +E Sbjct: 133 ISLYRLGFFHSIYYSRQAILHSKVLVNGKKIGHGGFILQKGDFVEFCPSHRPAIRARLVA 192 Query: 146 ---KSKQLASVLEASQLAER--------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 + + LE +L+ R P+++ ++ N+ + P+ + Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWVQTDYSNLSFILSSDVCAPVMYPFRID 252 Query: 195 MQPNL 199 + L Sbjct: 253 VDEAL 257 >gi|309798829|ref|ZP_07693092.1| ribosomal protein S4 [Streptococcus infantis SK1302] gi|308117555|gb|EFO54968.1| ribosomal protein S4 [Streptococcus infantis SK1302] Length = 64 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G K + R+Y PG HG +SK S +GLQL KQK Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKTSL 59 Query: 61 Y 61 + Sbjct: 60 H 60 >gi|268164077|ref|YP_003288854.1| ribosomal protein S4 [Saccharina coriacea] gi|262318387|dbj|BAI48706.1| ribosomal protein S4 [Saccharina coriacea] Length = 265 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 24/185 (12%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K + L ++++YGD+S K F+++ K + + S LI LE RLD Sbjct: 74 NQTFKYNRISYRNTLSILLCIRRFYGDLSHKAFKNLCKPLVALK-NPSQKLIGSLEGRLD 132 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ------------ 145 +YR F +I+ +RQ + H VLVNG+ + G + ++GD +E Sbjct: 133 ISLYRLGFFHSIYYSRQAILHSKVLVNGKKIGHGGFTLQKGDFVEFCPSHRPAIRARLVA 192 Query: 146 ---KSKQLASVLEASQLAER--------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 + + LE +L+ R P++I ++ N+ + P+ V Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSSDVCAPVLYPFRVD 252 Query: 195 MQPNL 199 + L Sbjct: 253 VDEAL 257 >gi|261279039|gb|ACX61703.1| ribosomal protein S4 [Orthotrichum rupestre] Length = 76 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADR 79 +YG I+E++F + + A + Sbjct: 58 HYG-ITERQFFNYVRIARK 75 >gi|11497481|ref|NP_042271.1| ribosomal protein S4 [Prototheca wickerhamii] gi|1173305|sp|P46743|RT04_PROWI RecName: Full=Ribosomal protein S4, mitochondrial gi|467872|gb|AAD12659.1| ribosomal protein S4 [Prototheca wickerhamii] Length = 511 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 57/126 (45%) Query: 37 HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96 + SK + L +K+K +YG I K+ I +A G S N S +E RL Sbjct: 145 RNKSAGSKSREYLEILLCVKKLKMFYGFIPLKQLHKILVQAKAMPGYFSKNFFSLIEKRL 204 Query: 97 DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156 D ++YR+ F TI AARQ H + VN + I S + GD+I K + L + Sbjct: 205 DVVLYRSGFTKTIVAARQACRHSQIYVNSKVCRIPSTILESGDIISYKNQLDSLKTAEIK 264 Query: 157 SQLAER 162 + L Sbjct: 265 NNLFSN 270 >gi|9695411|ref|NP_037633.1| ribosomal protein S4 [Phytophthora infestans] gi|6692663|gb|AAF24806.1|U17009_39 ribosomal protein S4 [Phytophthora infestans] gi|58012169|gb|AAW62577.1| ribosomal protein S4 [Phytophthora infestans] gi|58202008|gb|AAW67063.1| ribosomal protein S4 [Phytophthora infestans] gi|58202055|gb|AAW67109.1| ribosomal protein S4 [Phytophthora infestans] Length = 153 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 2/128 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 L K + + + + +F +L KQ+ + +YG I E + ++IF++ Sbjct: 24 LLKLNSKKWNLFKKKLRYRKEIKPEKRKKFFQKRLFEKQQFRNFYGCIHEYQLKNIFRKL 83 Query: 78 DRS--RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 + + + I LESRLD + R K V TIF A+Q +NH+ + VN + ++ ++ Sbjct: 84 SKKDNKINIFKKFIILLESRLDINLVRLKLVKTIFKAKQLINHKKIKVNNKIISKPNFIL 143 Query: 136 KEGDVIEV 143 ++GD+I + Sbjct: 144 QKGDIIHI 151 >gi|301500901|ref|YP_003795313.1| ribosomal protein S4 [Chromera velia] gi|300069447|gb|ADJ66555.1| ribosomal protein S4 [Chromera velia] Length = 2072 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 2/121 (1%) Query: 48 FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107 F +L+ KQK++ YY ++++ + ++ + D + + L++ LE RLD+++YR F P Sbjct: 1893 FLHRLKLKQKIQFYY-NLTDHQLKNYLRRRDSVKANFKLKLLAKLELRLDSLIYRLGFAP 1951 Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEY 167 +I AAR+ + +H+LVN + C D + V L +L+ L +++ +Y Sbjct: 1952 SILAARKLITQKHILVNNCMTYAPNLVCSIYDTVRVAPYRASLNHILKNIYL-NKELVKY 2010 Query: 168 I 168 I Sbjct: 2011 I 2011 >gi|54610897|gb|AAV35372.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. capense] Length = 85 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATF 179 VN V+I SYRCK D+I V+ + ++ S L E+ +P++++++ Sbjct: 1 VNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESLLGEK-IPDHLTLSLSEGSRPTGLV 59 Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 60 NRI---ASRESVNLNINELLVVEYYSR 83 >gi|261279049|gb|ACX61708.1| ribosomal protein S4 [Schistidium apocarpum] Length = 76 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|268309094|gb|ACY95505.1| ribosomal protein S4 [Dicranum scoparium] gi|268309120|gb|ACY95518.1| ribosomal protein S4 [Dicranum scoparium] gi|268309122|gb|ACY95519.1| ribosomal protein S4 [Dicranum scoparium] gi|268309124|gb|ACY95520.1| ribosomal protein S4 [Dicranum scoparium] gi|268309130|gb|ACY95523.1| ribosomal protein S4 [Dicranum scoparium] Length = 79 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSR 81 +YG I+E++ + + A +++ Sbjct: 58 HYG-ITERQLLNYVRIARKAK 77 >gi|312863507|ref|ZP_07723745.1| 30S ribosomal protein S4 domain protein [Streptococcus vestibularis F0396] gi|311101043|gb|EFQ59248.1| 30S ribosomal protein S4 domain protein [Streptococcus vestibularis F0396] Length = 64 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G +L G+ + +Y PG G +SK S +GLQL KQK++ Sbjct: 1 MSRYTGPSWKQARRLGLSLTGK---ELARCNYVPGQQGPNNRSKLSEYGLQLAEKQKLRF 57 Query: 61 YYG 63 YG Sbjct: 58 SYG 60 >gi|268309132|gb|ACY95524.1| ribosomal protein S4 [Dicranum howellii] Length = 76 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|268309118|gb|ACY95517.1| ribosomal protein S4 [Dicranum scoparium] gi|268309126|gb|ACY95521.1| ribosomal protein S4 [Dicranum scoparium] Length = 80 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSRGDT 84 +YG I+E++ + + A +++G Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSK 80 >gi|15150718|ref|NP_150384.1| ribosomal protein S4 [Pylaiella littoralis] gi|15147724|emb|CAC50825.1| ribosomal protein S4 [Pylaiella littoralis] Length = 265 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K + L + ++++YGD+S K F+S+ + + + + + S +L+ LE RLD Sbjct: 74 NQVFKYNRIGYRNTLSSIFCLRRFYGDLSHKSFKSLCQPSFKLK-NPSLDLLGTLEGRLD 132 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 +YR F +I+ +RQ + H ++VNG+ + + K+GD +E + Sbjct: 133 ICLYRLGFFHSIYYSRQAIQHNKIIVNGKKMGHSGFVLKKGDYVEFCPTQRS 184 >gi|268309134|gb|ACY95525.1| ribosomal protein S4 [Dicranum majus] Length = 80 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSR 81 +YG I+E++ + + A +++ Sbjct: 58 HYG-ITERQLLNYIRIARKAK 77 >gi|56182564|gb|AAV84028.1| Rps4 [Lygodium microphyllum] gi|56182566|gb|AAV84029.1| Rps4 [Lygodium microphyllum] gi|56182568|gb|AAV84030.1| Rps4 [Lygodium microphyllum] gi|56182570|gb|AAV84031.1| Rps4 [Lygodium microphyllum] gi|56182572|gb|AAV84032.1| Rps4 [Lygodium microphyllum] gi|56182574|gb|AAV84033.1| Rps4 [Lygodium microphyllum] gi|56182576|gb|AAV84034.1| Rps4 [Lygodium microphyllum] gi|56182578|gb|AAV84035.1| Rps4 [Lygodium microphyllum] gi|56182580|gb|AAV84036.1| Rps4 [Lygodium microphyllum] gi|56182582|gb|AAV84037.1| Rps4 [Lygodium microphyllum] gi|56182584|gb|AAV84038.1| Rps4 [Lygodium microphyllum] gi|56182586|gb|AAV84039.1| Rps4 [Lygodium microphyllum] gi|56182588|gb|AAV84040.1| Rps4 [Lygodium microphyllum] gi|56182590|gb|AAV84041.1| Rps4 [Lygodium microphyllum] gi|56182592|gb|AAV84042.1| Rps4 [Lygodium microphyllum] gi|56182594|gb|AAV84043.1| Rps4 [Lygodium microphyllum] gi|56182596|gb|AAV84044.1| Rps4 [Lygodium microphyllum] gi|56182598|gb|AAV84045.1| Rps4 [Lygodium microphyllum] gi|56182600|gb|AAV84046.1| Rps4 [Lygodium microphyllum] gi|56182602|gb|AAV84047.1| Rps4 [Lygodium microphyllum] gi|56182604|gb|AAV84048.1| Rps4 [Lygodium microphyllum] gi|56182606|gb|AAV84049.1| Rps4 [Lygodium microphyllum] gi|56182608|gb|AAV84050.1| Rps4 [Lygodium microphyllum] gi|56182610|gb|AAV84051.1| Rps4 [Lygodium microphyllum] gi|56182612|gb|AAV84052.1| Rps4 [Lygodium microphyllum] gi|56182614|gb|AAV84053.1| Rps4 [Lygodium microphyllum] gi|56182616|gb|AAV84054.1| Rps4 [Lygodium microphyllum] gi|56182618|gb|AAV84055.1| Rps4 [Lygodium microphyllum] gi|56182620|gb|AAV84056.1| Rps4 [Lygodium microphyllum] gi|56182622|gb|AAV84057.1| Rps4 [Lygodium microphyllum] gi|56182624|gb|AAV84058.1| Rps4 [Lygodium microphyllum] gi|56182626|gb|AAV84059.1| Rps4 [Lygodium microphyllum] gi|56182628|gb|AAV84060.1| Rps4 [Lygodium microphyllum] gi|56182630|gb|AAV84061.1| Rps4 [Lygodium microphyllum] gi|56182632|gb|AAV84062.1| Rps4 [Lygodium microphyllum] gi|56182634|gb|AAV84063.1| Rps4 [Lygodium microphyllum] gi|56182636|gb|AAV84064.1| Rps4 [Lygodium microphyllum] gi|56182638|gb|AAV84065.1| Rps4 [Lygodium microphyllum] gi|56182640|gb|AAV84066.1| Rps4 [Lygodium microphyllum] gi|56182642|gb|AAV84067.1| Rps4 [Lygodium microphyllum] gi|56182644|gb|AAV84068.1| Rps4 [Lygodium microphyllum] gi|56182646|gb|AAV84069.1| Rps4 [Lygodium microphyllum] gi|56609530|gb|AAW03316.1| ribosomal protein S4 [Lygodium microphyllum] gi|56609532|gb|AAW03317.1| ribosomal protein S4 [Lygodium microphyllum] gi|56609534|gb|AAW03318.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052701|gb|AAZ95196.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052703|gb|AAZ95197.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052705|gb|AAZ95198.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052707|gb|AAZ95199.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052709|gb|AAZ95200.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052711|gb|AAZ95201.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052713|gb|AAZ95202.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052715|gb|AAZ95203.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052717|gb|AAZ95204.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052719|gb|AAZ95205.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052721|gb|AAZ95206.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052723|gb|AAZ95207.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052725|gb|AAZ95208.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052727|gb|AAZ95209.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052729|gb|AAZ95210.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052731|gb|AAZ95211.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052733|gb|AAZ95212.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052735|gb|AAZ95213.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052737|gb|AAZ95214.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052739|gb|AAZ95215.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052741|gb|AAZ95216.1| ribosomal protein S4 [Lygodium microphyllum] gi|74052743|gb|AAZ95217.1| ribosomal protein S4 [Lygodium microphyllum] Length = 87 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 10/89 (11%) Query: 124 NGRSVNIGSYRCKEGDVIEVK---QKSKQLASVLEASQLAERDVPEYISV---NHDNMVA 177 N V+I SYRCK D+I +K S L S+ ++P+++++ D Sbjct: 1 NNCIVDIPSYRCKPKDIIALKGLLTPSGTLKSI-GTESSKRNEIPDHLTLFPTEGDETKG 59 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + I + + + LVVE+YSR Sbjct: 60 SVNGIVNR---ESIQLNINELLVVEYYSR 85 >gi|268309082|gb|ACY95499.1| ribosomal protein S4 [Dicranum scoparium] gi|268309096|gb|ACY95506.1| ribosomal protein S4 [Dicranum scoparium] gi|268309100|gb|ACY95508.1| ribosomal protein S4 [Dicranum scoparium] gi|268309128|gb|ACY95522.1| ribosomal protein S4 [Dicranum scoparium] Length = 77 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRSR 81 +YG I+E++ + + A +++ Sbjct: 58 HYG-ITERQLLNYVRIARKAK 77 >gi|254585373|ref|XP_002498254.1| ZYRO0G05918p [Zygosaccharomyces rouxii] gi|238941148|emb|CAR29321.1| ZYRO0G05918p [Zygosaccharomyces rouxii] Length = 479 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 7/156 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI-SEKKFRSIFKE 76 NL+ + + +++ ++ +Y G L K+ + + S + + K Sbjct: 27 NLYKKGQVDFRSKTLYQ-QKWTAKQETRAYHGEHLTEKRWQFFFNPKLDSVAQLDASLKG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + LE RLD V+RA F ++ ARQF+ +V VNG + +Y K Sbjct: 86 GKEEETPFLLQTFAVLEKRLDFAVFRAMFASSVRQARQFILQGNVFVNGIKIAHPNYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNH 172 GDV V+ VLEA + V E + V+ Sbjct: 146 PGDVFRVRPSK-----VLEALGAKKPSVQESLKVDK 176 >gi|56182648|gb|AAV84070.1| Rps4 [Lygodium microphyllum] Length = 87 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Query: 124 NGRSVNIGSYRCKEGDVIEVK---QKSKQLASVLEASQLAERDVPEYISV---NHDNMVA 177 N V+I SYRCK D+I +K S L S+ +P+++++ D Sbjct: 1 NNCIVDIPSYRCKPKDIIALKGLLTPSGTLKSI-GTESSKRNGIPDHLTLFPTEGDETKG 59 Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + I + + + LVVE+YSR Sbjct: 60 SVNGIVNR---ESIQLNINELLVVEYYSR 85 >gi|226329504|ref|ZP_03805022.1| hypothetical protein PROPEN_03413 [Proteus penneri ATCC 35198] gi|225202690|gb|EEG85044.1| hypothetical protein PROPEN_03413 [Proteus penneri ATCC 35198] Length = 68 Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56 M++ K K+ RR G +L+ + ++T+ PG HG RK + S +G+QLR KQ Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59 Query: 57 K 57 K Sbjct: 60 K 60 >gi|261279041|gb|ACX61704.1| ribosomal protein S4 [Polytrichum formosum] Length = 76 Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P Y ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|261279031|gb|ACX61699.1| ribosomal protein S4 [Brachythecium velutinum] Length = 76 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|261278971|gb|ACX61669.1| ribosomal protein S4 [Dicranum scoparium] gi|261278973|gb|ACX61670.1| ribosomal protein S4 [Dicranum scoparium] gi|261278975|gb|ACX61671.1| ribosomal protein S4 [Dicranum scoparium] gi|261278977|gb|ACX61672.1| ribosomal protein S4 [Dicranum scoparium] gi|261278979|gb|ACX61673.1| ribosomal protein S4 [Dicranum scoparium] gi|261278981|gb|ACX61674.1| ribosomal protein S4 [Dicranum scoparium] gi|261278983|gb|ACX61675.1| ribosomal protein S4 [Dicranum scoparium] gi|261278985|gb|ACX61676.1| ribosomal protein S4 [Dicranum scoparium] gi|261278987|gb|ACX61677.1| ribosomal protein S4 [Dicranum scoparium] gi|261278989|gb|ACX61678.1| ribosomal protein S4 [Dicranum scoparium] gi|261278991|gb|ACX61679.1| ribosomal protein S4 [Dicranum scoparium] gi|261278993|gb|ACX61680.1| ribosomal protein S4 [Dicranum scoparium] gi|261278995|gb|ACX61681.1| ribosomal protein S4 [Dicranum scoparium] gi|261278997|gb|ACX61682.1| ribosomal protein S4 [Dicranum scoparium] gi|261278999|gb|ACX61683.1| ribosomal protein S4 [Dicranum scoparium] gi|261279001|gb|ACX61684.1| ribosomal protein S4 [Dicranum scoparium] gi|261279003|gb|ACX61685.1| ribosomal protein S4 [Dicranum scoparium] gi|261279005|gb|ACX61686.1| ribosomal protein S4 [Dicranum scoparium] gi|261279007|gb|ACX61687.1| ribosomal protein S4 [Dicranum scoparium] gi|261279009|gb|ACX61688.1| ribosomal protein S4 [Dicranum scoparium] gi|261279011|gb|ACX61689.1| ribosomal protein S4 [Dicranum scoparium] gi|261279013|gb|ACX61690.1| ribosomal protein S4 [Dicranum scoparium] gi|261279015|gb|ACX61691.1| ribosomal protein S4 [Dicranum scoparium] gi|261279017|gb|ACX61692.1| ribosomal protein S4 [Dicranum bonjeanii] gi|261279021|gb|ACX61694.1| ribosomal protein S4 [Dicranum scoparium] gi|261279023|gb|ACX61695.1| ribosomal protein S4 [Dicranum scoparium] gi|261279025|gb|ACX61696.1| ribosomal protein S4 [Dicranum scoparium] gi|268309078|gb|ACY95497.1| ribosomal protein S4 [Dicranum scoparium] gi|268309080|gb|ACY95498.1| ribosomal protein S4 [Dicranum scoparium] gi|268309084|gb|ACY95500.1| ribosomal protein S4 [Dicranum scoparium] gi|268309086|gb|ACY95501.1| ribosomal protein S4 [Dicranum scoparium] gi|268309088|gb|ACY95502.1| ribosomal protein S4 [Dicranum scoparium] gi|268309090|gb|ACY95503.1| ribosomal protein S4 [Dicranum scoparium] gi|268309092|gb|ACY95504.1| ribosomal protein S4 [Dicranum scoparium] gi|268309098|gb|ACY95507.1| ribosomal protein S4 [Dicranum scoparium] gi|268309102|gb|ACY95509.1| ribosomal protein S4 [Dicranum scoparium] gi|268309104|gb|ACY95510.1| ribosomal protein S4 [Dicranum scoparium] gi|268309106|gb|ACY95511.1| ribosomal protein S4 [Dicranum scoparium] gi|268309110|gb|ACY95513.1| ribosomal protein S4 [Dicranum scoparium] gi|268309112|gb|ACY95514.1| ribosomal protein S4 [Dicranum scoparium] gi|268309114|gb|ACY95515.1| ribosomal protein S4 [Dicranum scoparium] gi|268309116|gb|ACY95516.1| ribosomal protein S4 [Dicranum scoparium] Length = 76 Score = 64.9 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|261279033|gb|ACX61700.1| ribosomal protein S4 [Calliergonella cuspidata] Length = 76 Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|261279047|gb|ACX61707.1| ribosomal protein S4 [Plagiomnium undulatum] Length = 76 Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|261279035|gb|ACX61701.1| ribosomal protein S4 [Hypnum cupressiforme] Length = 76 Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 YG I+E++ + + A ++ Sbjct: 58 LYG-ITERQLLNYVRMARKA 76 >gi|283795041|ref|YP_003359457.1| ribosomal protein S4 [Synedra acus] gi|261279697|gb|ACX62005.1| ribosomal protein S4 [Synedra acus] Length = 246 Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 7/149 (4%) Query: 39 QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF-------KEADRSRGDTSHNLISF 91 Q + L KQK YYG + +K ++ K + + L+S Sbjct: 69 QTSAFFHKKYKTILHNKQKTSFYYGGLKKKFWKKQINHVLTRKKSFFKLKSFKHLALLSL 128 Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RLD ++YRA F P+I ARQ + HV +N + S R K D + + + SK L Sbjct: 129 LERRLDVLLYRAHFAPSIKYARQLIQQGHVNLNNSVITESSVRLKNNDKVSLNKISKNLV 188 Query: 152 SVLEASQLAERDVPEYISVNHDNMVATFV 180 + P+Y+++N+ F Sbjct: 189 YDNLKNSTLWPLPPKYLAINYKTFEIIFT 217 >gi|187764107|ref|YP_001876556.1| ribosomal protein S4 [Dictyostelium fasciculatum] gi|160688815|gb|ABX45230.1| ribosomal protein S4 [Dictyostelium fasciculatum] Length = 276 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 6/151 (3%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K +L ++ YY +IS K+F+ +++ + + LE RLD+++ Sbjct: 102 KKYERDSIQKLVFYKRFLHYYKNISIKQFKKLYRILKKKQQK-LQKFWEILEGRLDSVLV 160 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R++ V T++AAR F+ ++H+ VNG+ +Y K GD I +++K ++A+ ++ +L Sbjct: 161 RSQLVRTMYAARHFIKYKHISVNGKVKTRLNYLIKIGDFIGMRRKKMKVATKIKLFELVR 220 Query: 162 RDV-----PEYISVNHDNMVATFVRIPSSLK 187 + + P Y+ + ++ T V P + Sbjct: 221 KGLMIGIGPAYLETDFRLLLTTMVYKPKMSE 251 >gi|60117135|ref|YP_209598.1| ribosomal protein S4 [Polysphondylium pallidum] gi|51339699|gb|AAU00613.1| ribosomal protein S4 [Polysphondylium pallidum] Length = 268 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 76/146 (52%), Gaps = 7/146 (4%) Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 +K + +Y ++ K+ ++I+K+ R + + S +S +E RLD+I+ R+ T++AAR F Sbjct: 108 RKFRFHYKNLKLKQIKNIYKQVTR-KQNKSKLFMSIIERRLDSILVRSSLFQTMYAARHF 166 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-----PEYISV 170 + + H+ VNGR + +Y GD++ K+ +L +L + P Y+ Sbjct: 167 IQYNHICVNGRIIKKLNYHVNIGDLVGFKKNKMRLKIKKILKRLIRKHKFISISPAYLET 226 Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQ 196 ++ ++ T + P +++ Y ++ Sbjct: 227 DYRLLLTTLIYTP-RKEEIKYLFTIK 251 >gi|261279029|gb|ACX61698.1| ribosomal protein S4 [Brachythecium rutabulum] Length = 76 Score = 64.2 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + + L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRILLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|261279043|gb|ACX61705.1| ribosomal protein S4 [Phaeoceros carolinianus] Length = 76 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGILPGLTNKISQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|261279027|gb|ACX61697.1| ribosomal protein S4 [Rosulabryum capillare] Length = 76 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG I+E++ + + A ++ Sbjct: 58 HYG-ITERQLLNYVRIARKA 76 >gi|157154437|gb|ABV24925.1| ribosomal protein small subunit 4 [Asplenium viride] Length = 84 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFV 180 N V+I SYRCK D+I V+ + ++ S + ++ P++++V D Sbjct: 1 NNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSLVGDKT-PDHLTVSLSEGDRATGLVN 59 Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ + + LVVE+YSR Sbjct: 60 RV---ANRESIVLNINELLVVEYYSR 82 >gi|78102651|gb|ABB21539.1| small ribosomal protein 4 [Plagiochila ericicola] Length = 68 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYI 168 ARQ VNHRH+ +N V+I SY C+ GD+I + K K + V + ++ +P ++ Sbjct: 1 PGARQLVNHRHISINNDIVDIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHL 60 Query: 169 SVNHDNMV 176 + + + Sbjct: 61 TFDSTQLR 68 >gi|261279019|gb|ACX61693.1| ribosomal protein S4 [Dicranum scoparium] Length = 74 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEAD 78 +YG I+E++ + + A Sbjct: 58 HYG-ITERQLLNYVRIAR 74 >gi|261279045|gb|ACX61706.1| ribosomal protein S4 [Preissia quadrata] Length = 76 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + KI RR+G K +S ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVKIIRRLGALPGLTNK---ILKSKSGSINQSTSNKKVSQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKFRSIFKEADRS 80 +YG ++E++ + A ++ Sbjct: 58 HYG-LTERQLLKYVRIARKA 76 >gi|84508596|ref|YP_448642.1| ribosomal protein S4 [Desmarestia viridis] gi|45925628|gb|AAS79029.1| ribosomal protein S4 [Desmarestia viridis] Length = 269 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 76/219 (34%), Gaps = 26/219 (11%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 +R +I R+ P Q K + L ++++Y Sbjct: 45 RRRRPLTQI--RLQNRRPTHPLCHDYRFIKPRARANQTFKYNRWGYRNTLSILFCLRRFY 102 Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 GD++ K F+ + S S L+ LE RLD +YR F +IF +RQ + H VL Sbjct: 103 GDLNHKAFKRLCHSVS-SSTTPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVL 161 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-----------------------QL 159 VNG + G + ++GD +E + + +L Sbjct: 162 VNGEKIGHGGFILQKGDYVEFCPTQRPAIRARLLARYKRYRSFRVRMERWRLSHRYKFEL 221 Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198 + P +I ++ N+ + P+ + + Sbjct: 222 HLQPTPRWIQTDYSNLSFILSANVGAPIIFPFRADVDES 260 >gi|50292421|ref|XP_448643.1| hypothetical protein [Candida glabrata CBS 138] gi|49527955|emb|CAG61606.1| unnamed protein product [Candida glabrata] Length = 484 Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 7/158 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQL-RAKQKMKKYYGDISEKKFRSIFKE 76 NL+ + ++S ++ +Y G + ++ + S + + + Sbjct: 27 NLYKKGNIDFRSKSLYQ-QKWSAKQETRAYHGEHITESRWQTMFSPKLDSVAQLDASLRG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + LE RLD V+RA F ++ ARQF+ H +V VNG + Y K Sbjct: 86 GVTKETPFLMQTFATLEKRLDFAVFRAMFASSVRQARQFILHGNVYVNGVKIKHPGYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 GD VK VL+A + E + V+ Sbjct: 146 PGDTFNVKP-----EKVLQALGSKKPSFEEALKVDKKQ 178 >gi|110225704|ref|YP_665709.1| ribosomal protein S4 [Mesostigma viride] gi|17222575|gb|AAL36748.1|AF353999_28 ribosomal protein S4 [Mesostigma viride] Length = 270 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 3/130 (2%) Query: 21 GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 + K + ++ + K S FG +L+ K+ ++ YG +S ++++I + ++ Sbjct: 17 LKNKELIFFQNSIKKRRKNQLKRPLSSFGKRLQTKKALEAIYGKLSIPQWKNIISKKNKP 76 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + + LE RLD ++ +A+F + ARQ++ H + VN + V K GD+ Sbjct: 77 KVTS---FFLNLERRLDRVICQARFASSSNMARQWILHEKIFVNNQLVTYPGTILKNGDI 133 Query: 141 IEVKQKSKQL 150 I + L Sbjct: 134 ISLSPDMFSL 143 >gi|151944400|gb|EDN62678.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae YJM789] Length = 486 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 7/158 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76 NL+ + + ++S ++ +Y G L K+ + S + + + Sbjct: 27 NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + LE RLD ++RA F ++ ARQF+ H +V VNG + SY K Sbjct: 86 GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 GD+ VK VLEA + + E + ++ Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPNFQEALKIDKTQ 178 >gi|327195253|ref|YP_004339035.1| ribosomal protein S4 [Coccomyxa sp. C-169] gi|325070749|gb|ADY75477.1| ribosomal protein S4 [Coccomyxa sp. C-169] Length = 266 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 + K++ YG+++ ++ + + +RG S NL LESR+D + R F TI A Sbjct: 1 MERNKLRIMYGNLANREVDRLIERGLSTRGVLSDNLFRLLESRIDVFLCRIGFFATIPNA 60 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 RQ+++H +L+N + V S+ K GDV+ + + + + E+ + Sbjct: 61 RQWIHHGKILINRKIVTTASHMLKPGDVVSI--SASNITPLRESLE 104 >gi|322695401|gb|EFY87210.1| 30S ribosomal subunit S4, putative [Metarhizium acridum CQMa 102] Length = 525 Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RLDT V+RA F ++ ARQFV H V VNG+ + SY+ GD+ +V Sbjct: 152 LERRLDTAVFRALFASSVRQARQFVIHGAVKVNGKKMVHPSYQLNPGDMFQVDIDKVMYG 211 Query: 152 SVLEASQLAERDVPEYISVNHDNMVA 177 + + + + + E +++ A Sbjct: 212 TGQQKATQGNKRLAE--NLDSRKKKA 235 >gi|323303395|gb|EGA57191.1| Nam9p [Saccharomyces cerevisiae FostersB] Length = 486 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76 NL+ + + ++S ++ +Y G L K+ + S + + + Sbjct: 27 NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + LE RLD ++RA F ++ ARQF+ H +V VNG + SY K Sbjct: 86 GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 GD+ VK VLEA + E + ++ Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178 >gi|190409124|gb|EDV12389.1| mitochondrial S4 ribosomal protein [Saccharomyces cerevisiae RM11-1a] gi|207341770|gb|EDZ69735.1| YNL137Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259149224|emb|CAY82466.1| Nam9p [Saccharomyces cerevisiae EC1118] gi|323307464|gb|EGA60737.1| Nam9p [Saccharomyces cerevisiae FostersO] gi|323331931|gb|EGA73343.1| Nam9p [Saccharomyces cerevisiae AWRI796] gi|323335936|gb|EGA77214.1| Nam9p [Saccharomyces cerevisiae Vin13] gi|323346867|gb|EGA81146.1| Nam9p [Saccharomyces cerevisiae Lalvin QA23] Length = 486 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76 NL+ + + ++S ++ +Y G L K+ + S + + + Sbjct: 27 NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + LE RLD ++RA F ++ ARQF+ H +V VNG + SY K Sbjct: 86 GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 GD+ VK VLEA + E + ++ Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178 >gi|6324192|ref|NP_014262.1| Nam9p [Saccharomyces cerevisiae S288c] gi|1346661|sp|P27929|NAM9_YEAST RecName: Full=37S ribosomal protein NAM9, mitochondrial; AltName: Full=Nuclear accommodation of mitochondria protein 9; Flags: Precursor gi|507139|gb|AAA19439.1| NAM9+ protein [Saccharomyces cerevisiae] gi|854500|emb|CAA86888.1| mitochondrial ribosomal protein (putative) [Saccharomyces cerevisiae] gi|1302082|emb|CAA96019.1| NAM9 [Saccharomyces cerevisiae] gi|285814517|tpg|DAA10411.1| TPA: Nam9p [Saccharomyces cerevisiae S288c] Length = 486 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76 NL+ + + ++S ++ +Y G L K+ + S + + + Sbjct: 27 NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + LE RLD ++RA F ++ ARQF+ H +V VNG + SY K Sbjct: 86 GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 GD+ VK VLEA + E + ++ Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178 >gi|323352538|gb|EGA85037.1| Nam9p [Saccharomyces cerevisiae VL3] Length = 486 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76 NL+ + + ++S ++ +Y G L K+ + S + + + Sbjct: 27 NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + LE RLD ++RA F ++ ARQF+ H +V VNG + SY K Sbjct: 86 GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 GD+ VK VLEA + E + ++ Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178 >gi|324309734|gb|ADY18515.1| ribosomal protein S4 [Phaeodactylum tricornutum] Length = 249 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 12/140 (8%) Query: 52 LRAKQKMKKYYGDISEKKFRSIF--------KEADRSRGDTSHNLISFLESRLDTIVYRA 103 L +K+ YG I+ ++ + ++ + + + + ESRLD +++RA Sbjct: 82 LHTTKKLALLYGGITSRQLKKYLNLMKKENGRKNNEKKETFNLLPLKKFESRLDIVLHRA 141 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163 KFV +I AARQ + H +V VN + S+ + GD IE+ Q + L + Sbjct: 142 KFVFSIKAARQLIVHGNVYVNQVKIKSKSHILRPGDSIEMNSSYSQRINESSFQTLKSKP 201 Query: 164 V----PEYISVNHDNMVATF 179 P ++ +N+ M F Sbjct: 202 FWPLPPNHLHINYRTMQIIF 221 >gi|74325180|ref|YP_316600.1| ribosomal protein S4 [Thalassiosira pseudonana] gi|74100246|gb|AAZ99407.1| ribosomal protein S4 [Thalassiosira pseudonana] Length = 248 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN----LISFLESRLDTIVYRAKFVP 107 L+ KQ++ +YG++ + + + KE+ + + LI LE+RLDTI+YR F Sbjct: 89 LQNKQRLSLFYGNLRKSYLKKLVKESLKESKHINSQATVLLIEKLETRLDTILYRTHFCH 148 Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEY 167 + +A+Q ++H+ + VN + V + K+GD+I + + + P++ Sbjct: 149 SFRSAKQLISHQKIYVNNKIVKHNFHALKKGDIITLDKSITNFVASNILKSEMWPIPPKH 208 Query: 168 ISVNHDNMVATFV 180 +N+ + + Sbjct: 209 FYINYRTLQILII 221 >gi|322712486|gb|EFZ04059.1| 30S ribosomal subunit S4 [Metarhizium anisopliae ARSEF 23] Length = 489 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RLDT V+RA F ++ ARQFV H V VNG+ + SY+ GD+ +V Sbjct: 116 LERRLDTAVFRALFASSVRQARQFVIHGAVKVNGKKMIHPSYQLNPGDMFQVDIDKVMYG 175 Query: 152 SVLEASQLAERDVPEYISVNHDNMVA 177 + + + + + E +++ A Sbjct: 176 TGQQKATQGNKRLAE--NLDSRKQKA 199 >gi|295311707|ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo] gi|259156835|gb|ACV96696.1| ribosomal protein S4 [Cucurbita pepo] Length = 356 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 21/192 (10%) Query: 2 SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53 ++ + K R + N+W R + + R + +R + Y +QL+ Sbjct: 4 TRYALPALRFKTCRLLLGNVWNRELTIIQRRILRKLRNKRRSIKRKIYSRENLNSYIQLQ 63 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 +K+ +YGD+ + + + + LE+RLD I+ R F T+ AR Sbjct: 64 TTRKLSLFYGDLPITEMHRGRERTNYIP------FLLNLETRLDVILVRLHFSSTLPQAR 117 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173 Q ++HR V VN V I ++ GD+I +K+ ++ YI ++ + Sbjct: 118 QLISHRRVCVNKGMVPITHFKVSHGDLISLKENDARIRGEEIRRSF-------YIEISVE 170 Query: 174 NMVATFVRIPSS 185 ++ F+ P Sbjct: 171 KIIGKFLDHPVR 182 >gi|254569396|ref|XP_002491808.1| Mitochondrial ribosomal component of the small subunit [Pichia pastoris GS115] gi|238031605|emb|CAY69528.1| Mitochondrial ribosomal component of the small subunit [Pichia pastoris GS115] gi|328351692|emb|CCA38091.1| 37S ribosomal protein NAM9, mitochondrial [Pichia pastoris CBS 7435] Length = 469 Score = 61.5 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 26/150 (17%) Query: 30 RSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG-DISEKKFRSIFKEADR--------- 79 + PG +GQ + +K + + Y+G + E K++ IF + Sbjct: 30 KKQRPGFNGQSLYQQKWN------SKAETRAYHGEHLRESKWQHIFSPKLQGVAQLDASL 83 Query: 80 SRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 G+T + LE RLD ++RA F ++ ARQ++ H++V VNG + +Y Sbjct: 84 QGGNTDETPMMLQTFAVLEKRLDVALFRAMFASSVRQARQYIIHKYVSVNGVVMRHPNYE 143 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDV 164 K GDV V+ VLEA A+ D+ Sbjct: 144 LKPGDVFSVRPDK-----VLEALGKAKPDL 168 >gi|5442406|gb|AAD43332.1|AF155828_3 ribosomal protein S4 [Dictyostelium discoideum] Length = 283 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L + +K+Y ++ K+F+ ++K+ + +I LE R+D ++ R+ FV +++ Sbjct: 91 LTLHRLFRKFYLNLKLKQFKLLYKKYKGNEK----VIIQQLEKRVDMVLLRSGFVRSLYE 146 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 ARQ +NH+H+LVNG+ ++ Y GD+I K+ S Sbjct: 147 ARQIINHKHLLVNGKIASLPGYMINVGDIISFKEGSM 183 >gi|256273838|gb|EEU08760.1| Nam9p [Saccharomyces cerevisiae JAY291] Length = 486 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76 NL+ + + ++S ++ +Y G L K+ + S + + + Sbjct: 27 NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + LE RLD ++RA F ++ ARQF+ H +V VNG + SY K Sbjct: 86 GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145 Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 GD+ VK VLEA + E + ++ Sbjct: 146 PGDMFSVKP-----VKVLEALGAKKPSFQEALKIDKTQ 178 >gi|316996026|dbj|BAD83538.2| ribosomal protein S4 [Nicotiana tabacum] Length = 349 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 21/193 (10%) Query: 2 SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53 ++ + K R + N+W R + + R + +R + Y +QL+ Sbjct: 1 TRYALPALRFKTCRLLLGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQLQ 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 +K+ +YGD+ + + + LE+RLD I+ R F TI AR Sbjct: 61 TTRKLSLFYGDLPITEMHRGRERTSYIP------FLLNLETRLDVILVRLHFCETIPQAR 114 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173 Q ++HR V VN VNI ++ GD+I ++ V + +R YI + + Sbjct: 115 QLISHRRVCVNNGMVNITHFKLSHGDIISFQEND-----VRTRGEEIKRSF--YIEILVE 167 Query: 174 NMVATFVRIPSSL 186 ++ F+ P Sbjct: 168 KIIGKFLDHPWRR 180 >gi|19113342|ref|NP_596550.1| mitochondrial ribosomal protein subunit S4 [Schizosaccharomyces pombe 972h-] gi|48474754|sp|O60063|YBB1_SCHPO RecName: Full=Putative 40S ribosomal protein S4-like gi|3080526|emb|CAA18654.1| mitochondrial ribosomal protein subunit S4 [Schizosaccharomyces pombe] Length = 327 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 15/124 (12%) Query: 53 RAKQKMKKYYGD-ISEKKFRSIFKEA---------DRSRGDTSHNLISFLESRLDTIVYR 102 AK++ + Y+G + E + ++ F+ ++ + +FLESRLD ++R Sbjct: 45 NAKKETRSYHGPQLREYQLKNAFRPKLEGVISSLDNKLPIPFMNQTYAFLESRLDMSIHR 104 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 A F + ARQ V H V VNG+ + GD++ V SV+ + Sbjct: 105 ALFASSALQARQLVLHGKVHVNGKPERRAYRQLLPGDLVTV-----DQKSVMNCVSASSN 159 Query: 163 DVPE 166 + P Sbjct: 160 NTPS 163 >gi|260222203|emb|CBA31531.1| hypothetical protein Csp_F38010 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 50 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + QLA++ +P ++ V+ + TF +P + + + +L+VE YSR Sbjct: 2 SLQLAQQVGLPAWVEVSVEKAEGTFKTVPDRDQ---FGADINESLIVELYSR 50 >gi|302510661|ref|XP_003017282.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371] gi|291180853|gb|EFE36637.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371] Length = 526 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 75 KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 +E R DT + L++F LE RLD ++RA F + ARQFV H V VNG+ + Sbjct: 113 REDGRQVPDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 172 Query: 133 YRCKEGDVIEV 143 Y GD+ +V Sbjct: 173 YLLNPGDMFQV 183 >gi|323435070|ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. maritima] gi|317905723|emb|CBJ14108.1| ribosomal protein S4 [Beta vulgaris subsp. maritima] gi|319439803|emb|CBJ17515.1| ribosomal protein S4 [Beta vulgaris subsp. maritima] Length = 315 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 6/104 (5%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K +QLR +K+ +YG++ K R++ + + LE+RLD I+ R Sbjct: 46 RKNRNSYIQLRTTRKLSLFYGNLPITKMHR------RTKRTSYIPFLLNLETRLDVILVR 99 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 F TI ARQ ++HR V VN VNI ++ GD+I ++ Sbjct: 100 LHFCETIPQARQLISHRKVCVNNGIVNISHFKVSHGDIISFQEN 143 >gi|294669848|ref|ZP_06734907.1| hypothetical protein NEIELOOT_01741 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308241|gb|EFE49484.1| hypothetical protein NEIELOOT_01741 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 71 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRK 42 M++ K K+ RR G +L+ + + V ++ PG HG ++ Sbjct: 1 MARYIGPKCKLARREGTDLFLKSARRSVESKCKFDSAPGQHGAKKH 46 >gi|162279921|ref|NP_064046.2| ribosomal protein S4 [Beta vulgaris subsp. vulgaris] gi|87248052|gb|ABD36080.1| ribosomal protein S4 [Beta vulgaris subsp. vulgaris] gi|148491424|dbj|BAA99356.2| ribosomal protein S4 [Beta vulgaris subsp. vulgaris] gi|320148708|emb|CBJ23346.1| ribosomal protein S4 [Beta vulgaris subsp. maritima] Length = 315 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 6/104 (5%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K +QLR +K+ +YG++ K R++ + + LE+RLD I+ R Sbjct: 46 RKNRNSYIQLRTTRKLSLFYGNLPITKMHR------RTKRTSYIPFLLNLETRLDVILVR 99 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 F TI ARQ ++HR V VN VNI ++ GD+I ++ Sbjct: 100 LHFCETIPQARQLISHRKVCVNNGIVNISHFKVSHGDIISFQEN 143 >gi|119632785|gb|ABL84398.1| ribosomal protein S4 [Streptococcus suis] Length = 64 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Query: 141 IEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200 I V++KS ++ ++LEA + A P ++S + + + + R+P + + LV Sbjct: 1 ISVREKSIKVPAILEAVE-ATLGRPAFVSFDAEKLEGSLTRLPERDE---INPEINEALV 56 Query: 201 VEFYSR 206 VEFY++ Sbjct: 57 VEFYNK 62 >gi|7525008|ref|NP_050106.1| ribosomal protein S4 [Dictyostelium discoideum] gi|74849891|sp|Q9XPI8|RT04_DICDI RecName: Full=Ribosomal protein S4, mitochondrial gi|4958911|dbj|BAA78088.1| ribosomal protein S4 [Dictyostelium discoideum] Length = 300 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%) Query: 52 LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111 L + +K+Y ++ K+F+ ++K+ + +I LE R+D ++ R+ FV +++ Sbjct: 108 LTLHRLFRKFYLNLKLKQFKLLYKKYKGNEK----VIIQQLEKRVDMVLLRSGFVRSLYE 163 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 ARQ +NH+H+LVNG+ ++ Y GD+I K+ S Sbjct: 164 ARQIINHKHLLVNGKIASLPGYMINVGDIISFKEGSM 200 >gi|302024640|ref|ZP_07249851.1| 30S ribosomal protein S4 [Streptococcus suis 05HAS68] Length = 49 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY 47 MS+ K RR+G +L G K + R+Y PG HG +S S Sbjct: 1 MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPYNRSTLSD 46 >gi|54606786|dbj|BAD66809.1| ribosomal protein S4 [Beta vulgaris subsp. vulgaris] Length = 315 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 15/123 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 K + + Y K +QLR +K+ ++G++ K R++ Sbjct: 36 KKSIKKKMYP---------RKNRNSYIQLRTTRKLSLFHGNLPITKMHR------RTKRT 80 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + E+RLD I+ R F TI ARQ ++HR V VN VNI ++ GD+I Sbjct: 81 SYIPFLLNPETRLDVILVRLHFCETIPQARQPISHRKVCVNNGIVNISHFKVSHGDIISF 140 Query: 144 KQK 146 ++ Sbjct: 141 QEN 143 >gi|156841474|ref|XP_001644110.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM 70294] gi|156114745|gb|EDO16252.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM 70294] Length = 482 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 S LE RLD ++R+ F +I ARQF+ H +V VNG V Y K GD+ VK Sbjct: 96 QTYSVLEKRLDFALFRSMFASSIRQARQFIIHGNVYVNGTKVKHPGYTLKPGDMFNVKP- 154 Query: 147 SKQLASVLEASQLAERDVPEYISVNH 172 VL+A + + E + ++ Sbjct: 155 ----EMVLKALGYKKPSLLEGLKIDK 176 >gi|295658597|ref|XP_002789859.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226283003|gb|EEH38569.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 453 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 165 LERRLDVAIFRAMFASSTRQARQFVLHGSVTVNGKKMKHPGYLLNPGDLFQV 216 >gi|15897040|ref|NP_341645.1| 30S ribosomal protein S4P [Sulfolobus solfataricus P2] gi|284173384|ref|ZP_06387353.1| 30S ribosomal protein S4P [Sulfolobus solfataricus 98/2] gi|2500401|sp|P95987|RS4_SULSO RecName: Full=30S ribosomal protein S4P gi|1707821|emb|CAA69529.1| ribosomal protein S4 [Sulfolobus solfataricus P2] gi|13813205|gb|AAK40435.1| SSU ribosomal protein S4AB (rps4AB) [Sulfolobus solfataricus P2] gi|261601694|gb|ACX91297.1| ribosomal protein S4 [Sulfolobus solfataricus 98/2] Length = 181 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQ 145 LE RL TIVY+ TI+ ARQ + H H+ VNG+ V Y + V Sbjct: 100 DLLERRLQTIVYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTS 159 Query: 146 KSKQLASVLEASQLAERDV 164 K V+ + E V Sbjct: 160 SFKSRPPVMSQQEGGEIGV 178 >gi|240273798|gb|EER37317.1| NAM9+ protein [Ajellomyces capsulatus H143] gi|325094771|gb|EGC48081.1| NAM9+ protein [Ajellomyces capsulatus H88] Length = 490 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDLFQV 174 >gi|302348808|ref|YP_003816446.1| 30S ribosomal protein S4P [Acidilobus saccharovorans 345-15] gi|302329220|gb|ADL19415.1| 30S ribosomal protein S4P [Acidilobus saccharovorans 345-15] Length = 177 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 32/73 (43%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RL T+VYR TI+ ARQ V H H+ +NGR V Y + ++ Sbjct: 101 LERRLQTLVYRKGLAKTIYQARQLVTHGHIAINGRRVTSPGYIVPRDEEDRIEIAPGSPL 160 Query: 152 SVLEASQLAERDV 164 E+DV Sbjct: 161 RASAQQSGGEQDV 173 >gi|225555459|gb|EEH03751.1| NAM9+ protein [Ajellomyces capsulatus G186AR] Length = 490 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDLFQV 174 >gi|323478100|gb|ADX83338.1| ribosomal protein S4 [Sulfolobus islandicus HVE10/4] Length = 181 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQ 145 LE RL TIVY+ T + ARQ + H H+ VNG+ V Y + V Sbjct: 100 DLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTS 159 Query: 146 KSKQLASVLEASQLAERDV 164 K V+ + E V Sbjct: 160 SFKSRPPVMAQQEGGEAGV 178 >gi|227828305|ref|YP_002830085.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.14.25] gi|227831063|ref|YP_002832843.1| 30S ribosomal protein S4P [Sulfolobus islandicus L.S.2.15] gi|229579944|ref|YP_002838343.1| 30S ribosomal protein S4P [Sulfolobus islandicus Y.G.57.14] gi|229581395|ref|YP_002839794.1| 30S ribosomal protein S4P [Sulfolobus islandicus Y.N.15.51] gi|229585535|ref|YP_002844037.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.16.27] gi|238620497|ref|YP_002915323.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.16.4] gi|284998559|ref|YP_003420327.1| ribosomal protein S4 [Sulfolobus islandicus L.D.8.5] gi|259495293|sp|C3N052|RS4_SULIA RecName: Full=30S ribosomal protein S4P gi|259495294|sp|C4KJ91|RS4_SULIK RecName: Full=30S ribosomal protein S4P gi|259495295|sp|C3MJP5|RS4_SULIL RecName: Full=30S ribosomal protein S4P gi|259495296|sp|C3MZ03|RS4_SULIM RecName: Full=30S ribosomal protein S4P gi|259495297|sp|C3NMQ2|RS4_SULIN RecName: Full=30S ribosomal protein S4P gi|259495298|sp|C3N8R6|RS4_SULIY RecName: Full=30S ribosomal protein S4P gi|227457511|gb|ACP36198.1| ribosomal protein S4 [Sulfolobus islandicus L.S.2.15] gi|227460101|gb|ACP38787.1| ribosomal protein S4 [Sulfolobus islandicus M.14.25] gi|228010659|gb|ACP46421.1| ribosomal protein S4 [Sulfolobus islandicus Y.G.57.14] gi|228012111|gb|ACP47872.1| ribosomal protein S4 [Sulfolobus islandicus Y.N.15.51] gi|228020585|gb|ACP55992.1| ribosomal protein S4 [Sulfolobus islandicus M.16.27] gi|238381567|gb|ACR42655.1| ribosomal protein S4 [Sulfolobus islandicus M.16.4] gi|284446455|gb|ADB87957.1| ribosomal protein S4 [Sulfolobus islandicus L.D.8.5] gi|323475375|gb|ADX85981.1| ribosomal protein S4 [Sulfolobus islandicus REY15A] Length = 181 Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQ 145 LE RL TIVY+ T + ARQ + H H+ VNG+ V Y + V Sbjct: 100 DLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTS 159 Query: 146 KSKQLASVLEASQLAERDV 164 K V+ + E V Sbjct: 160 SFKSRPPVMAQQEGGEAGV 178 >gi|226321920|ref|ZP_03797446.1| 30S ribosomal protein S4 [Borrelia burgdorferi Bol26] gi|226233109|gb|EEH31862.1| 30S ribosomal protein S4 [Borrelia burgdorferi Bol26] Length = 77 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 5/78 (6%) Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMVATFVRIPSSLKD 188 + D I++K+K + + + R++P +I VN D++ PS + Sbjct: 1 PFIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLNIKVKHAPSRDE- 59 Query: 189 VPYPVIMQPNLVVEFYSR 206 P + +VVE+YS+ Sbjct: 60 --IPTLANEQMVVEYYSK 75 >gi|50546507|ref|XP_500723.1| YALI0B10494p [Yarrowia lipolytica] gi|49646589|emb|CAG82968.1| YALI0B10494p [Yarrowia lipolytica] Length = 571 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + + LE RLD V+R+ F +I A QF+ +V VNG + SY K Sbjct: 106 NKKLKTPFAMQTFVHLEKRLDFAVFRSMFAASIRQAGQFIRQGNVTVNGVKIKHASYTLK 165 Query: 137 EGDVIEVKQKS------KQLASVLEASQLAERDVPEY 167 GD+I VK + K SV EA ++ R + +Y Sbjct: 166 PGDLISVKPEKVLFAAGKAKPSVEEAVKIDNRQIKKY 202 >gi|327295753|ref|XP_003232571.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892] gi|326464882|gb|EGD90335.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892] Length = 500 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 75 KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 +E R DT + L++F LE RLD ++RA F + ARQFV H V VNG+ + Sbjct: 103 REDGRQVPDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 162 Query: 133 YRCKEGDVIEV 143 Y GD+ +V Sbjct: 163 YLLNPGDMFQV 173 >gi|302660531|ref|XP_003021944.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517] gi|291185865|gb|EFE41326.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517] Length = 509 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 75 KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 KE R DT + L++F LE RLD ++RA F + ARQFV H V VNG+ + Sbjct: 116 KEDGRQVQDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 175 Query: 133 YRCKEGDVIEV 143 Y GD+ +V Sbjct: 176 YLLNPGDMFQV 186 >gi|50303139|ref|XP_451507.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640638|emb|CAH03095.1| KLLA0A11660p [Kluyveromyces lactis] Length = 482 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 12/150 (8%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77 NL+ + + +++ ++ +Y G L + + + E + S+ + Sbjct: 27 NLYKKSQVSFRSKTLYQ-QKWTSKQETRAYHGEHLTESR-----WQSVFEPQLNSVAQLD 80 Query: 78 DRSR------GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 R + LE RLD ++RA F ++ ARQF+ H +V VNG + Sbjct: 81 ASLRGGDIEPTPILLQTYAVLEKRLDFALFRAMFASSVRQARQFILHGNVHVNGVKITSP 140 Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 Y K GDV V+ + A + L E Sbjct: 141 GYALKAGDVFNVRPEKVLQALGAKKPSLKE 170 >gi|326472324|gb|EGD96333.1| 30S ribosomal subunit S4 [Trichophyton tonsurans CBS 112818] Length = 483 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 75 KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 +E R DT + L++F LE RLD ++RA F + ARQFV H V VNG+ + Sbjct: 103 REDGRQVQDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 162 Query: 133 YRCKEGDVIEV 143 Y GD+ +V Sbjct: 163 YLLNPGDMFQV 173 >gi|160688766|gb|ABX45182.1| ribosomal protein S4 [Polysphondylium pallidum] Length = 268 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 6/137 (4%) Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 +K + YY ++ ++ ++I+ + R++ + LE RLD+I+ R+ F T+++AR F Sbjct: 108 RKFRYYYKNLKIRQIKNIYSQLKRNKKKV-KIFMEILECRLDSILVRSNFFQTMYSARHF 166 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-----DVPEYISV 170 + + H+ VNG +N +Y GD+I + + +L +L + P ++ Sbjct: 167 IKYNHISVNGILINKINYNTNIGDLIGLNKNDIKLKIKKILKKLVRKHKFISTSPAFLET 226 Query: 171 NHDNMVATFVRIPSSLK 187 ++ ++ T + P + Sbjct: 227 DYRLLLTTLIYKPRKEE 243 >gi|296420306|ref|XP_002839716.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635910|emb|CAZ83907.1| unnamed protein product [Tuber melanosporum] Length = 366 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 29/56 (51%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 +E RLD V+RA F + ARQFV H V VNG+ + Y GD+ V Q Sbjct: 175 MERRLDMAVHRAMFASSARQARQFVVHGFVKVNGKKMVHPGYMLNPGDMFSVNQDQ 230 >gi|51458159|gb|AAU03428.1| ribosomal protein small subunit 4 [Asplenium petrarchae subsp. bivalens] Length = 92 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHD 173 NHR++LVN + +I SYRCK D I V+ + ++ S + ++ P + D Sbjct: 2 NHRNILVNNCNGDIPSYRCKPKDFITVRNRPTSCNALRNKSMVGDKT-PGALDRSLSEGD 60 Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 R+ + + LVVE+YSR Sbjct: 61 RPTGLVNRV---ANRESINLNINELLVVEYYSR 90 >gi|226290430|gb|EEH45914.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 512 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 123 LERRLDVAIFRAMFASSTRQARQFVLHGSVTVNGKKMKYPGYLLNPGDLFQV 174 >gi|293376357|ref|ZP_06622594.1| 30S ribosomal protein S4 domain protein [Turicibacter sanguinis PC909] gi|292645046|gb|EFF63119.1| 30S ribosomal protein S4 domain protein [Turicibacter sanguinis PC909] Length = 44 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSK 44 M++ KI RR+G ++ K + R Y PG HGQ RK Sbjct: 1 MARYTGPSWKISRRLGYSILENGKE-LQKRPYAPGQHGQSRKKN 43 >gi|121702393|ref|XP_001269461.1| 30S ribosomal subunit S4, putative [Aspergillus clavatus NRRL 1] gi|119397604|gb|EAW08035.1| 30S ribosomal subunit S4, putative [Aspergillus clavatus NRRL 1] Length = 464 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V+ Sbjct: 122 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPD 176 >gi|255711504|ref|XP_002552035.1| KLTH0B05698p [Lachancea thermotolerans] gi|238933413|emb|CAR21597.1| KLTH0B05698p [Lachancea thermotolerans] Length = 480 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 + LE RLD ++RA F ++ ARQF+ H +V VNG + Y K GDV VK Sbjct: 96 QTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVFVNGIKITQPGYPLKAGDVFNVKP- 154 Query: 147 SKQLASVLEASQLAERDVPEYISVNH 172 VL+A + + E + ++ Sbjct: 155 ----EKVLQALGAKKPSLSEALKIDK 176 >gi|225682980|gb|EEH21264.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 513 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 123 LERRLDVAIFRAMFASSTRQARQFVLHGSVTVNGKKMKYPGYLLNPGDLFQV 174 >gi|261193076|ref|XP_002622944.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis SLH14081] gi|239589079|gb|EEQ71722.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis SLH14081] gi|327352581|gb|EGE81438.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis ATCC 18188] Length = 498 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 29/60 (48%) Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + LE RLD ++RA F + ARQFV H V VNG + Y GD+ +V Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVVHGFVTVNGTKMRHPGYLLNPGDLFQV 174 >gi|239613660|gb|EEQ90647.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis ER-3] Length = 498 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 29/60 (48%) Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + LE RLD ++RA F + ARQFV H V VNG + Y GD+ +V Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVVHGFVTVNGTKMRHPGYLLNPGDLFQV 174 >gi|302882319|ref|XP_003040070.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI 77-13-4] gi|256720937|gb|EEU34357.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI 77-13-4] Length = 511 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 34/56 (60%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 LE RLDT V+RA F ++ ARQF+ H V VNG+ + SY GD+ +V+ + Sbjct: 160 LERRLDTAVFRAMFASSVRQARQFIIHGAVKVNGKKMVHPSYALNPGDMFQVQIEK 215 >gi|319738222|emb|CBJ17998.1| ribosomal protein S4 [Ectocarpus siliculosus] Length = 265 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 24/185 (12%) Query: 38 GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97 Q K + L +K++YGD+ K F+ F ++ D+S L+S LE RLD Sbjct: 74 NQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKG-FCQSGFKSKDSSLKLLSSLEGRLD 132 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-- 155 +YR F +I+ +RQ + H VLVNG+ + G + ++GD +E + Sbjct: 133 MCLYRLGFFHSIYYSRQAILHNKVLVNGKKIGHGGFVLQKGDFVEFCPTQRAAIRARLVA 192 Query: 156 ---------------------ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194 +L + P++I ++ N+ + P+ Sbjct: 193 RYKRFRSPHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDACAFALFPFRAN 252 Query: 195 MQPNL 199 + L Sbjct: 253 IDEAL 257 >gi|317030176|ref|XP_001392029.2| S4 domain containing protein [Aspergillus niger CBS 513.88] Length = 465 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 31/55 (56%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD V+RA F + ARQFV H V VNG+ + Y GD+ +V+ + Sbjct: 135 LERRLDVAVFRAMFASSTRQARQFVIHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 189 >gi|154287040|ref|XP_001544315.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150407956|gb|EDN03497.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 453 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 154 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNSGDLFQV 213 >gi|119196147|ref|XP_001248677.1| hypothetical protein CIMG_02448 [Coccidioides immitis RS] gi|303321920|ref|XP_003070954.1| S4 domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240110651|gb|EER28809.1| S4 domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 463 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 129 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQYPGYLLNPGDLFQV 180 >gi|134076525|emb|CAK39720.1| unnamed protein product [Aspergillus niger] Length = 436 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 31/55 (56%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD V+RA F + ARQFV H V VNG+ + Y GD+ +V+ + Sbjct: 106 LERRLDVAVFRAMFASSTRQARQFVIHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 160 >gi|320040475|gb|EFW22408.1| 30S ribosomal subunit S4 [Coccidioides posadasii str. Silveira] Length = 463 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 129 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQYPGYLLNPGDLFQV 180 >gi|46121899|ref|XP_385503.1| hypothetical protein FG05327.1 [Gibberella zeae PH-1] Length = 514 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 25/52 (48%), Positives = 32/52 (61%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLDT V+RA F ++ ARQFV H V VNG+ + SY GD+ +V Sbjct: 160 LERRLDTAVFRAMFASSVRQARQFVIHGAVKVNGKKMVHPSYALNPGDMFQV 211 >gi|116196236|ref|XP_001223930.1| hypothetical protein CHGG_04716 [Chaetomium globosum CBS 148.51] gi|88180629|gb|EAQ88097.1| hypothetical protein CHGG_04716 [Chaetomium globosum CBS 148.51] Length = 382 Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 + + +E RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 46 MQMMFAPMERRLDIAIFRALFASSARQARQFVLHGAVTVNGKKMTYPGYLLNPGDMFQV- 104 Query: 145 QKSKQLASVLEASQLAERD 163 ++ V+ A+ +R Sbjct: 105 ----EIERVMAATGKPKRK 119 >gi|328774061|gb|EGF84098.1| hypothetical protein BATDEDRAFT_4674 [Batrachochytrium dendrobatidis JAM81] Length = 216 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 21/150 (14%) Query: 55 KQKMKKYYG-DISEKKF-----------RSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 K++++ Y+ +I E++F R + E LE R D +++R Sbjct: 42 KRELRGYHVPNIHERQFLNRHFESYLPNRQLTPEEKSKIPPIQTLAFGELERRPDVVLFR 101 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + F +I+ ARQ V R VLVNG + R ++GD++ V K+ + +Q+ Sbjct: 102 SHFADSIWKARQMVASRCVLVNGERCRYAARRLQDGDMVTVIPKAIPTLKGQKGTQMKFH 161 Query: 163 D---------VPEYISVNHDNMVATFVRIP 183 P Y+ V+++ F+R P Sbjct: 162 PKAYMSPWMFTPAYLEVDYNTCSTVFLRSP 191 >gi|70991196|ref|XP_750447.1| 30S ribosomal subunit S4 [Aspergillus fumigatus Af293] gi|66848079|gb|EAL88409.1| 30S ribosomal subunit S4, putative [Aspergillus fumigatus Af293] gi|159130921|gb|EDP56034.1| 30S ribosomal subunit S4, putative [Aspergillus fumigatus A1163] Length = 469 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V+ + Sbjct: 127 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 181 >gi|67537988|ref|XP_662768.1| hypothetical protein AN5164.2 [Aspergillus nidulans FGSC A4] gi|40743155|gb|EAA62345.1| hypothetical protein AN5164.2 [Aspergillus nidulans FGSC A4] gi|259484618|tpe|CBF80996.1| TPA: 30S ribosomal subunit S4, putative (AFU_orthologue; AFUA_1G06980) [Aspergillus nidulans FGSC A4] Length = 457 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 R++ ++ + LE RLD ++RA F + ARQFV H V VNG+ + Y G Sbjct: 110 RTKTPYTNMTFAPLERRLDVAIFRALFASSARQARQFVLHGAVTVNGKKMRYPGYLLNPG 169 Query: 139 DVIEV 143 D+ +V Sbjct: 170 DMFQV 174 >gi|189197847|ref|XP_001935261.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981209|gb|EDU47835.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 426 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 76 EADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 E R+ T + +++ LE RLDT ++RA F ++ ARQFV H V VNG+ + Y Sbjct: 104 EKARTPPMTPYMQMAYYPLERRLDTAIFRALFASSVRQARQFVVHGLVKVNGKKMIYPGY 163 Query: 134 RCKEGDVIEVKQKS 147 GD+ +V+ S Sbjct: 164 ALNPGDMFQVEPSS 177 >gi|115388607|ref|XP_001211809.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114195893|gb|EAU37593.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 457 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V+ + Sbjct: 124 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKKMRYPGYLLNPGDMFQVEPE 178 >gi|45198580|ref|NP_985609.1| AFR062Cp [Ashbya gossypii ATCC 10895] gi|44984531|gb|AAS53433.1| AFR062Cp [Ashbya gossypii ATCC 10895] Length = 473 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 2/131 (1%) Query: 18 NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQL-RAKQKMKKYYGDISEKKFRSIFKE 76 NL+ + + + T++ ++ +Y G L ++ + S + + K Sbjct: 27 NLYKKSQIDLRTKTLYQ-QKWSSKQETRAYHGEHLTESRWQSTFSPRLTSVAQLDASLKG 85 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 D + + LE RL+ ++RA F ++ ARQF+ H +V VNG ++ Y K Sbjct: 86 GDVAPTPILMQTYAVLEKRLEFALFRAMFASSVRQARQFILHGNVYVNGVTMKHPGYPLK 145 Query: 137 EGDVIEVKQKS 147 GD+ V+ Sbjct: 146 AGDMFSVRPDK 156 >gi|119496387|ref|XP_001264967.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181] gi|119413129|gb|EAW23070.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181] Length = 469 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V+ + Sbjct: 127 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 181 >gi|212538099|ref|XP_002149205.1| 30S ribosomal subunit S4, putative [Penicillium marneffei ATCC 18224] gi|210068947|gb|EEA23038.1| 30S ribosomal subunit S4, putative [Penicillium marneffei ATCC 18224] Length = 439 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V+ + Sbjct: 120 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQFPGYLLNPGDLFQVEPE 174 >gi|315045031|ref|XP_003171891.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893] gi|311344234|gb|EFR03437.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893] Length = 475 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Query: 77 ADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 R +T + L++F LE RLD ++RA F + ARQFV H V VNG+ + Y Sbjct: 103 KTRQVPETPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYL 162 Query: 135 CKEGDVIEV 143 GD+ +V Sbjct: 163 LNPGDMFQV 171 >gi|330946008|ref|XP_003306674.1| hypothetical protein PTT_19866 [Pyrenophora teres f. teres 0-1] gi|311315724|gb|EFQ85225.1| hypothetical protein PTT_19866 [Pyrenophora teres f. teres 0-1] Length = 426 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 76 EADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 E R+ T + +++ LE RLDT ++RA F ++ ARQFV H V VNG+ + Y Sbjct: 104 EKVRTPPMTPYMQMAYYPLERRLDTAIFRALFASSVRQARQFVVHGLVKVNGKKMIYPGY 163 Query: 134 RCKEGDVIEVKQKS 147 GD+ +V+ S Sbjct: 164 ALNPGDMFQVEPSS 177 >gi|213402771|ref|XP_002172158.1| 37S ribosomal protein NAM9 [Schizosaccharomyces japonicus yFS275] gi|212000205|gb|EEB05865.1| 37S ribosomal protein NAM9 [Schizosaccharomyces japonicus yFS275] Length = 307 Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 18/149 (12%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD-I 65 K + R++ W + + P L+G+ K K++ + ++G + Sbjct: 5 PKFSLSRQLLRPSWNKYNAFNFACKKLPNLNGKTLFQKKWIA------KRETRSFHGPHL 58 Query: 66 SEKKFRSIFKEA-----------DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114 E +F++ F+ + S+ L + LESRLD ++RA F ++ A + Sbjct: 59 REYQFKNYFESKLLGMTSVNSPAENSKIPFMSQLYAPLESRLDIALHRAMFASSVEQAHK 118 Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + V VNG R + GDV+ V Sbjct: 119 IIVSNKVSVNGIREKRAHLRLEPGDVVTV 147 >gi|296810354|ref|XP_002845515.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480] gi|238842903|gb|EEQ32565.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480] Length = 477 Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 35/79 (44%) Query: 65 ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124 + E++ K + LE RLD ++RA F + ARQFV H V VN Sbjct: 101 LPEEQGGRDRKAQKPRDTPYMQMTFAPLERRLDVAIFRALFASSTRQARQFVIHGGVTVN 160 Query: 125 GRSVNIGSYRCKEGDVIEV 143 G+ + Y GD+ +V Sbjct: 161 GKKMQYPGYLLNPGDMFQV 179 >gi|242807612|ref|XP_002484992.1| 30S ribosomal subunit S4, putative [Talaromyces stipitatus ATCC 10500] gi|218715617|gb|EED15039.1| 30S ribosomal subunit S4, putative [Talaromyces stipitatus ATCC 10500] Length = 443 Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V+ + Sbjct: 120 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQFPGYLLNPGDLFQVEPE 174 >gi|331252013|ref|XP_003338582.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317572|gb|EFP94163.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 399 Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%) Query: 29 TRSYGPGLHGQR--RKSKPSYFGLQLRAKQKMKKYYGD-ISEKKFRSIFKE--------- 76 RS+GP R SK Y+ + R+K + Y+GD I EKKF+ + Sbjct: 29 QRSFGPENKDTNFLRSSKTVYW-QKWRSKAVTRAYHGDWIQEKKFKRHYLPASLPALAVK 87 Query: 77 ---------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + LE RLD ++R+ F +++ AR+ V H V +NG Sbjct: 88 SSLKKSRYGNREEKVPLAALMYQELERRLDVAIFRSCFADSVYEARRIVIHGAVKLNGVK 147 Query: 128 VNIGSYRCKEGDVIEV 143 N R GD+ V Sbjct: 148 CNAPWTRLHPGDMFTV 163 >gi|320581194|gb|EFW95415.1| Mitochondrial ribosomal component of the small subunit [Pichia angusta DL-1] Length = 476 Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 15/123 (12%) Query: 54 AKQKMKKYYG-DISEKKFRSIFKEA------------DRSRGDTSHN--LISFLESRLDT 98 +KQK + Y+G I E ++ +F++ ++ +T + LE RLD Sbjct: 48 SKQKTRGYHGEHIPEGRWLKLFQKKLDGVAQMDASLSGKANDETPMVLQTFAVLEKRLDV 107 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158 V+RA F ++ ARQF+ V VNG + SY GDV V+ A + Sbjct: 108 AVFRAMFASSVRQARQFILAGDVKVNGVPIKHPSYPLSPGDVFSVEPDRVLQALGEKKPS 167 Query: 159 LAE 161 L E Sbjct: 168 LKE 170 >gi|239811700|gb|ACS27186.1| ribosomal protein S4 [Heterosigma akashiwo] Length = 268 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 22/177 (12%) Query: 1 MSKRESSKHKIDRRIGENL---WGRPKSPVNTRS-YGPGLHGQRRKSKPSYFGLQLRAKQ 56 MS + + K R+ +++ + K S + G++ + +F QL K Sbjct: 1 MSHFKKPRFKSYVRLAKDIRNDFKTDKFNRLKWSTFKKIQEGKKITNFFHHFESQLTKKH 60 Query: 57 KMKKYYGD----------ISEKKFRSIFKEADRSRGDT--------SHNLISFLESRLDT 98 ++ +G+ + K+ + F + + T N + LE RLD Sbjct: 61 QLTSNFGNQRLKNLFKENLLTKQRLATFYKLQSYKFKTLIRQNAKKQINFLYLLERRLDV 120 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 I+YR FV ++ +RQ ++H+ V VN + ++ K+GD+IE++ K + + Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIEIQMHPKPTVNAQK 177 >gi|11467052|ref|NP_042528.1| ribosomal protein S4 [Acanthamoeba castellanii] gi|1173304|sp|P46755|RT04_ACACA RecName: Full=Ribosomal protein S4, mitochondrial gi|562033|gb|AAD11821.1| ribosomal protein S4 [Acanthamoeba castellanii] Length = 374 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 4/133 (3%) Query: 56 QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 +K+ ++G F ++ A S + LE RL+ + R P+I+ ++F Sbjct: 221 KKVSLFFGFRKVVDFFKVYNLAGALAKGNSFAVFLMLEGRLENFLMRLNLFPSIYFIKKF 280 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVN 171 + + +V VN + +N SY +++ +K + S+L +R V P ++ V+ Sbjct: 281 IEYGNVFVNNKIINYTSYHLNFNEIVSFNKKYYKKLYFFIKSKLRQRKVIINAPSFVEVD 340 Query: 172 HDNMVATFVRIPS 184 + +VA +R P Sbjct: 341 YKLLVAMLIRNPD 353 >gi|255948696|ref|XP_002565115.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592132|emb|CAP98457.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255] Length = 457 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 32/58 (55%) Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 H + LE RLD ++RA F + ARQFV H V VNG+ + SY GD+ +V Sbjct: 115 HMTFAPLERRLDVAIFRALFASSARQARQFVIHGAVTVNGQKMKHPSYLLNPGDLFQV 172 >gi|239811660|gb|ACS27147.1| ribosomal protein S4 [Heterosigma akashiwo] Length = 268 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 22/177 (12%) Query: 1 MSKRESSKHKIDRRIGENL---WGRPKSPVNTRS-YGPGLHGQRRKSKPSYFGLQLRAKQ 56 MS + + K R+ +++ + K S + G++ + +F QL K Sbjct: 1 MSHFKKPRFKSYVRLAKDIRNDFKTDKFNRLKWSTFKKIQEGKKITNFFHHFESQLTKKH 60 Query: 57 KMKKYYGD----------ISEKKFRSIFKEADRSRGDT--------SHNLISFLESRLDT 98 ++ +G+ + K+ + F + + T N + LE RLD Sbjct: 61 QLTSNFGNQRLKNLFKENLLTKQRLATFYKLQSYKFKTLIRQNAKRQINFLYLLERRLDV 120 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 I+YR FV ++ +RQ ++H+ V VN + ++ K+GD+IE++ K + + Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIEIQMHPKPTVNAQK 177 >gi|147919300|ref|YP_686964.1| 30S ribosomal protein S4P [uncultured methanogenic archaeon RC-I] gi|121685291|sp|Q0W1V5|RS4_UNCMA RecName: Full=30S ribosomal protein S4P gi|110622360|emb|CAJ37638.1| 30S ribosomal protein S4P [uncultured methanogenic archaeon RC-I] Length = 205 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%) Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + I KE + + + +E RL TI+YR F +I ARQF+ H H+ +NGR + Sbjct: 85 QTLGILKEDAKLEDVLALKVDDIMERRLQTIIYRKGFANSIKQARQFIVHGHISLNGRKI 144 Query: 129 NIGSYRC 135 + Y Sbjct: 145 TVPGYLV 151 >gi|171690318|ref|XP_001910084.1| hypothetical protein [Podospora anserina S mat+] gi|170945107|emb|CAP71218.1| unnamed protein product [Podospora anserina S mat+] Length = 449 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 31/59 (52%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 E RLD V+RA F + ARQFV H V VNG+ + Y GD+ +V + +A Sbjct: 135 ERRLDISVFRALFASSARQARQFVIHGAVKVNGKKMQHPGYLLNPGDLFQVDPEKVMIA 193 >gi|126952015|gb|ABO28119.1| ribosomal protein S4 [Casimiroa edulis] gi|126952167|gb|ABO28193.1| ribosomal protein S4 [Zanthoxylum monophyllum] Length = 58 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|126952160|gb|ABO28190.1| ribosomal protein S4 [Toddalia asiatica] Length = 58 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRFGKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|261279037|gb|ACX61702.1| ribosomal protein S4 [Metzgeria furcata] Length = 66 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P + ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRF 57 Query: 61 YYGDISEKKF 70 +YG I+ ++F Sbjct: 58 HYG-ITGQQF 66 >gi|57014001|ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum] Length = 349 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 21/193 (10%) Query: 2 SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53 ++ + K R + N+W R + + R + +R + Y +Q + Sbjct: 1 TRYALPALRFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQSQ 60 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 +K+ +YGD+ + + + E+R D I R F TI AR Sbjct: 61 TTRKLSLFYGDLPITEMHRGRERTSYIP------FLLNPETRSDVIPVRLHFCETIPQAR 114 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173 Q ++HR V VN VNI ++ GD+I ++ + YI ++ + Sbjct: 115 QPISHRRVCVNNGMVNITHFKLSHGDIISFQENDARTRGEEIKRSF-------YIEISVE 167 Query: 174 NMVATFVRIPSSL 186 ++ F+ P Sbjct: 168 KIIGKFLDHPWRR 180 >gi|126951998|gb|ABO28111.1| ribosomal protein S4 [Aegle marmelos] gi|126952000|gb|ABO28112.1| ribosomal protein S4 [Aeglopsis chevalieri] gi|126952002|gb|ABO28113.1| ribosomal protein S4 [Afraegle paniculata] gi|126952010|gb|ABO28117.1| ribosomal protein S4 [Balsamocitrus dawei] gi|126952019|gb|ABO28121.1| ribosomal protein S4 [x Citrofortunella sp. PI 539802] gi|126952021|gb|ABO28122.1| ribosomal protein S4 [Citropsis daweana] gi|126952023|gb|ABO28123.1| ribosomal protein S4 [Citropsis schweinfurthii] gi|126952027|gb|ABO28125.1| ribosomal protein S4 [Citrus aurantiifolia] gi|126952039|gb|ABO28131.1| ribosomal protein S4 [Citrus halimii] gi|126952041|gb|ABO28132.1| ribosomal protein S4 [Citrus hystrix] gi|126952043|gb|ABO28133.1| ribosomal protein S4 [Citrus ichangensis] gi|126952045|gb|ABO28134.1| ribosomal protein S4 [Citrus indica] gi|126952047|gb|ABO28135.1| ribosomal protein S4 [Citrus jambhiri] gi|126952049|gb|ABO28136.1| ribosomal protein S4 [Citrus junos] gi|126952051|gb|ABO28137.1| ribosomal protein S4 [Citrus latifolia] gi|126952059|gb|ABO28140.1| ribosomal protein S4 [x Citrofortunella microcarpa] gi|126952061|gb|ABO28141.1| ribosomal protein S4 [Citrus maxima] gi|126952065|gb|ABO28143.1| ribosomal protein S4 [Citrus medica] gi|126952076|gb|ABO28148.1| ribosomal protein S4 [Citrus reticulata] gi|126952082|gb|ABO28151.1| ribosomal protein S4 [Citrus tachibana] gi|126952084|gb|ABO28152.1| ribosomal protein S4 [Clausena excavata] gi|126952086|gb|ABO28153.1| ribosomal protein S4 [Clausena harmandiana] gi|126952088|gb|ABO28154.1| ribosomal protein S4 [Clymenia polyandra] gi|126952090|gb|ABO28155.1| ribosomal protein S4 [Eremocitrus glauca] gi|126952092|gb|ABO28156.1| ribosomal protein S4 [Limonia acidissima] gi|126952094|gb|ABO28157.1| ribosomal protein S4 [Feroniella oblata] gi|126952096|gb|ABO28158.1| ribosomal protein S4 [Flindersia australis] gi|126952098|gb|ABO28159.1| ribosomal protein S4 [Citrus japonica] gi|126952100|gb|ABO28160.1| ribosomal protein S4 [Fortunella margarita] gi|126952102|gb|ABO28161.1| ribosomal protein S4 [Fortunella polyandra] gi|126952104|gb|ABO28162.1| ribosomal protein S4 [Citrus hybrid cultivar] gi|126952108|gb|ABO28164.1| ribosomal protein S4 [Glycosmis sp. RJB GH06-111] gi|126952110|gb|ABO28165.1| ribosomal protein S4 [Glycosmis trichanthera] gi|126952112|gb|ABO28166.1| ribosomal protein S4 [Luvunga sp. TT 364] gi|126952116|gb|ABO28168.1| ribosomal protein S4 [Merrillia caloxylon] gi|126952118|gb|ABO28169.1| ribosomal protein S4 [Microcitrus australasica] gi|126952122|gb|ABO28171.1| ribosomal protein S4 [Microcitrus garrowayae] gi|126952126|gb|ABO28173.1| ribosomal protein S4 [Microcitrus papuana] gi|126952128|gb|ABO28174.1| ribosomal protein S4 [Microcitrus warburgiana] gi|126952132|gb|ABO28176.1| ribosomal protein S4 [Monanthocitrus cornuta] gi|126952138|gb|ABO28179.1| ribosomal protein S4 [Oxanthera neocaledonica] gi|126952140|gb|ABO28180.1| ribosomal protein S4 [Oxanthera sp. V 7758] gi|126952142|gb|ABO28181.1| ribosomal protein S4 [Pamburus missionis] gi|126952144|gb|ABO28182.1| ribosomal protein S4 [Paramignya lobata] gi|126952150|gb|ABO28185.1| ribosomal protein S4 [Citrus trifoliata] gi|126952154|gb|ABO28187.1| ribosomal protein S4 [Severinia buxifolia] gi|126952158|gb|ABO28189.1| ribosomal protein S4 [Swinglea glutinosa] Length = 58 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|320590340|gb|EFX02783.1| 30S ribosomal subunit [Grosmannia clavigera kw1407] Length = 450 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 2/119 (1%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86 + +R + R Q + K+ + R+ T Sbjct: 70 MFSRRLASVVDMNPRYMAEFDGSEQAEGRGSGKQRDPSAGSPQLAPWAGTNLRTTQPTPF 129 Query: 87 NLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 ++F +E RLD V+R+ F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 130 MQMTFAPMERRLDIAVFRSLFASSARQARQFVVHGAVRVNGKKMVYPGYLLNPGDLFQV 188 >gi|288871915|dbj|BAI70601.1| ribosomal protein S4 [Heterosigma akashiwo] Length = 268 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 22/177 (12%) Query: 1 MSKRESSKHKIDRRIGENL---WGRPKSPVNTRS-YGPGLHGQRRKSKPSYFGLQLRAKQ 56 MS + + K R+ ++ + K S + G++ + +F QL K Sbjct: 1 MSHFKKPRFKSYVRLARDIRNDFKTDKFNRLKWSTFKKIQEGKKITNFFHHFESQLTKKH 60 Query: 57 KMKKYYGD----------ISEKKFRSIFKEADRSRGDT--------SHNLISFLESRLDT 98 ++ +G+ + K+ + F + + T N + LE RLD Sbjct: 61 QLTSNFGNQRLKNLFKENLLTKQRLATFYKLQSYKFKTLIRQNAKKQINFLYLLERRLDV 120 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 I+YR FV ++ +RQ ++H+ V VN + ++ K+GD+IE++ K + + Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIEIQMYPKPTVNAQK 177 >gi|238489961|ref|XP_002376218.1| 30S ribosomal subunit S4, putative [Aspergillus flavus NRRL3357] gi|220698606|gb|EED54946.1| 30S ribosomal subunit S4, putative [Aspergillus flavus NRRL3357] Length = 455 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 118 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKQMRYPGYLLNPGDLFQV 169 >gi|134045318|ref|YP_001096804.1| 30S ribosomal protein S4P [Methanococcus maripaludis C5] gi|172044139|sp|A4FWL4|RS4_METM5 RecName: Full=30S ribosomal protein S4P gi|132662943|gb|ABO34589.1| SSU ribosomal protein S4P [Methanococcus maripaludis C5] Length = 178 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 55/157 (35%), Gaps = 46/157 (29%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K G Q K +G L K+++ K E + R+ Sbjct: 5 RRLG-------KKYDTPNHPWIGERIQSEKEISQKYG--LVNKKELWKM-----ETQLRN 50 Query: 73 IFKEADRSRGDTSH--------------------------------NLISFLESRLDTIV 100 ++A + DT+ N+ S LE RL TIV Sbjct: 51 YRRQARKLISDTTTQGGKEAVQLFNVLKRYAILVESEPTLDHVLSLNIESILERRLQTIV 110 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 YR T ARQF+ H H+ VNG+ V +Y Sbjct: 111 YRKGLAKTAKQARQFIVHGHIAVNGKRVTAPAYLVSV 147 >gi|224110334|ref|XP_002333103.1| predicted protein [Populus trichocarpa] gi|222834886|gb|EEE73335.1| predicted protein [Populus trichocarpa] Length = 305 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 17/139 (12%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISF-LESRLDTIVYRAKFVPT 108 +QL+ +K+ +YGD+ E R R TS+ LE RLD I+ R F T Sbjct: 14 IQLQTTRKLSIFYGDLPE---------MHRGRERTSYIPFLLNLERRLDVILVRLHFCET 64 Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYI 168 I ARQ ++HR V VN R V+I + GD+I ++ ++ YI Sbjct: 65 IPQARQLISHRRVCVNNRMVSITHLKVSHGDIISFQENDARIRGEEIRRSF-------YI 117 Query: 169 SVNHDNMVATFVRIPSSLK 187 + D ++ F+ P + Sbjct: 118 EILVDKIIGKFLDHPVRRR 136 >gi|126952013|gb|ABO28118.1| ribosomal protein S4 [Burkillanthus malaccensis] Length = 58 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQ ++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQTLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|169763980|ref|XP_001727890.1| S4 domain containing protein [Aspergillus oryzae RIB40] gi|83770918|dbj|BAE61051.1| unnamed protein product [Aspergillus oryzae] Length = 455 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 118 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKQMRYPGYLLNPGDLFQV 169 >gi|48478292|ref|YP_023998.1| 30S ribosomal protein S4P [Picrophilus torridus DSM 9790] gi|61215561|sp|Q6KZP7|RS4_PICTO RecName: Full=30S ribosomal protein S4P gi|48430940|gb|AAT43805.1| small subunit ribosomal protein S4P [Picrophilus torridus DSM 9790] Length = 183 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 27/154 (17%) Query: 3 KRESSKH-----KID--RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55 K + +H +ID R++ + K + R ++ + F Q R Sbjct: 10 KYSTPRHPWEKDRIDAERQLLIKYGLKNKREL-----------WRAQTILTNFRTQARTL 58 Query: 56 QKMKKYYGDISEKKFRSIFKEADRS---------RGDTSHNLISFLESRLDTIVYRAKFV 106 Q +Y ++ K+F+ + + R S N+ LE RL+T+VY+ Sbjct: 59 QAKLRYNDPLAIKQFQLLIGKLSRLNLLGENATLDDVLSLNIEDILERRLETLVYKKNLA 118 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 T+ ARQF+ H H+ VN R V I S+ ++ Sbjct: 119 LTMKQARQFITHGHIKVNDRVVTIPSFMVEKSME 152 >gi|116754908|ref|YP_844026.1| 30S ribosomal protein S4P [Methanosaeta thermophila PT] gi|121694237|sp|A0B9L2|RS4_METTP RecName: Full=30S ribosomal protein S4P gi|116666359|gb|ABK15386.1| SSU ribosomal protein S4P [Methanosaeta thermophila PT] Length = 183 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 31/57 (54%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + LE RL T VYR TI ARQF+ H H+ V G+ V + SY K GD + + Sbjct: 99 KITDILERRLQTQVYRQGLANTIRQARQFITHGHIQVAGQRVTVPSYLVKRGDEMTI 155 >gi|15922390|ref|NP_378059.1| 30S ribosomal protein S4P [Sulfolobus tokodaii str. 7] gi|26399447|sp|Q96YV8|RS4_SULTO RecName: Full=30S ribosomal protein S4P gi|15623179|dbj|BAB67168.1| 177aa long hypothetical 30S ribosomal protein S4 [Sulfolobus tokodaii str. 7] Length = 177 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 25/175 (14%) Query: 10 KIDRR--IGENLWGRP--KSPVNTRSYGPGLHGQRRKSK-------PSYFGLQLRAKQKM 58 K RR G G P + + G +G R K + F Q R+ + Sbjct: 5 KKSRRKWEG---PGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLAL 61 Query: 59 KKYYGDISEKKF-RSIFKEADRSRGDT------SHNLISFLESRLDTIVYRAKFVPTIFA 111 EK+ + +++ + + N ++LE RL TIVY+ TI+ Sbjct: 62 PPAERSTREKQLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKKGLARTIYQ 121 Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQKSKQLASVLEASQLAER 162 ARQ + H H+ + GR V Y G+ KQ + + ++ Sbjct: 122 ARQLIVHGHIAIGGRRVTSPGYIVMRGEEDLIDFYPTSPFKQHPPTQQGEENVQQ 176 >gi|154293126|ref|XP_001547113.1| hypothetical protein BC1G_14515 [Botryotinia fuckeliana B05.10] gi|150845660|gb|EDN20853.1| hypothetical protein BC1G_14515 [Botryotinia fuckeliana B05.10] Length = 423 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 31/52 (59%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 +E RLDT ++RA F + ARQFV H V VNG+ ++ Y GD+ +V Sbjct: 122 IERRLDTAIFRALFASSARQARQFVVHGKVKVNGKKMSYPGYLLNPGDMFQV 173 >gi|45358883|ref|NP_988440.1| 30S ribosomal protein S4P [Methanococcus maripaludis S2] gi|61215572|sp|Q6LXN0|RS4_METMP RecName: Full=30S ribosomal protein S4P gi|45047749|emb|CAF30876.1| SSU ribosomal protein S4P (S9E) [Methanococcus maripaludis S2] Length = 178 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 60/169 (35%), Gaps = 46/169 (27%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K G Q+ K +G L K+++ K E + R+ Sbjct: 5 RRLG-------KKYDTPNHPWIGERIQKEKEISQKYG--LVNKKELWKM-----ETQLRN 50 Query: 73 IFKEADRSRGDTSH--------------------------------NLISFLESRLDTIV 100 ++A + DT+ N+ S LE RL TIV Sbjct: 51 YRRQARKLISDTTTQGGKEAVQLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQTIV 110 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 +R T ARQF+ H H+ VNG+ V +Y + ++ S Sbjct: 111 FRKGLAKTPKQARQFIVHGHIAVNGKRVTAPAYLISVAENDAIEYVSNS 159 >gi|150401523|ref|YP_001325289.1| 30S ribosomal protein S4 [Methanococcus aeolicus Nankai-3] gi|171460892|sp|A6UW05|RS4_META3 RecName: Full=30S ribosomal protein S4P gi|150014226|gb|ABR56677.1| ribosomal protein S4 [Methanococcus aeolicus Nankai-3] Length = 177 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 23/50 (46%), Positives = 29/50 (58%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 NL S LE RL T+V+R T ARQF+ H H+ VNG+ +N SY Sbjct: 97 NLESILERRLQTLVFRKGLANTPKQARQFIVHGHIAVNGKKINAPSYLVP 146 >gi|295311663|ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|259156791|gb|ACV96653.1| ribosomal protein S4 [Citrullus lanatus] Length = 355 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 74/192 (38%), Gaps = 21/192 (10%) Query: 2 SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53 ++ + + R + N+W R + + R + +R + Y +QL+ Sbjct: 4 TRYALPALRFQTCRLLLGNVWNRELTIIQRRILRKLRNKKRSIKRKIYSRENLNSYIQLQ 63 Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 +K+ YGD+ + + + LE+RLD I+ R F TI AR Sbjct: 64 TTRKLSLNYGDLPITEMHRGTERTSYIP------FLLNLETRLDVILVRLHFSETIPQAR 117 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173 Q ++HR V VN V+I ++ GD+I + E YI + + Sbjct: 118 QLISHRRVCVNKGMVSITHFKVSHGDLI-------SFQENDARIRGEEIRRFFYIEILVE 170 Query: 174 NMVATFVRIPSS 185 ++ F+ P Sbjct: 171 KIIGKFLDHPVR 182 >gi|156034805|ref|XP_001585821.1| hypothetical protein SS1G_13338 [Sclerotinia sclerotiorum 1980] gi|154698741|gb|EDN98479.1| hypothetical protein SS1G_13338 [Sclerotinia sclerotiorum 1980 UF-70] Length = 425 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 30/52 (57%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 +E RLDT ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 123 IERRLDTAIFRALFASSTRQARQFVVHGKVKVNGKKMPYPGYLLNPGDMFQV 174 >gi|258569883|ref|XP_002543745.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237904015|gb|EEP78416.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 467 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RLD ++RA F + ARQFV H V VNG+ + Y GD+ +V Sbjct: 129 LERRLDVAIFRALFASSTRQARQFVVHGWVTVNGKKMQYPGYLLNPGDLFQV 180 >gi|282164926|ref|YP_003357311.1| 30S ribosomal protein S4P [Methanocella paludicola SANAE] gi|282157240|dbj|BAI62328.1| 30S ribosomal protein S4P [Methanocella paludicola SANAE] Length = 208 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + KE + + + LE +L TIV+R + ++ ARQF+ H HV +NGR + Sbjct: 85 QKLGVLKEDSKLEDILALKVEDLLERQLQTIVFRKGYANSMKQARQFIVHGHVSLNGRKI 144 Query: 129 NIGSYRC 135 + SY Sbjct: 145 TVPSYMV 151 >gi|126952008|gb|ABO28116.1| ribosomal protein S4 [Atalantia monophylla] Length = 58 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSHSVKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|283139279|gb|ADB12614.1| Rps4 [Hordelymus europaeus] Length = 63 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 4/64 (6%) Query: 144 KQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 K + + V ++ +P++++++ +I + + LVVE Sbjct: 1 KDNQRSKSLVQNYIASSDPGKLPKHLTIDTLEYKGLVNKILDRK---WVGLKINELLVVE 57 Query: 203 FYSR 206 +YSR Sbjct: 58 YYSR 61 >gi|70605931|ref|YP_254801.1| 30S ribosomal protein S4P [Sulfolobus acidocaldarius DSM 639] gi|73920776|sp|P39467|RS4_SULAC RecName: Full=30S ribosomal protein S4P gi|68566579|gb|AAY79508.1| 30S ribosomal protein S4P [Sulfolobus acidocaldarius DSM 639] Length = 176 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query: 64 DISEKKF-RSIFKEADRSRGDTSHNLI------SFLESRLDTIVYRAKFVPTIFAARQFV 116 +I EK+ + +++ + +++ + I ++LE RL TIVY+ TI+ ARQ + Sbjct: 67 NIREKQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLI 126 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDV 140 H H+ ++GR V Y G+ Sbjct: 127 THGHIAISGRKVTSPGYVVLRGEE 150 >gi|328850294|gb|EGF99460.1| hypothetical protein MELLADRAFT_40240 [Melampsora larici-populina 98AG31] Length = 335 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 22/142 (15%) Query: 27 VNTRSYGP--GLHGQRRKSKPSYFGLQLRAKQKMKKYYGD-ISEKKFRSIF--------- 74 + R+YGP R SK Y+ + +++ + Y+GD I EKKF+ + Sbjct: 27 LFQRTYGPESKETNFTRTSKTVYW-QRCKSRAVTRAYHGDWIQEKKFKRHYLPASLPKLS 85 Query: 75 ----KEADRSRGDTSHNLISFL-----ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125 ++ ++S S ++ + E RLD +++R+ F +++ AR+ V H V +NG Sbjct: 86 IQPYQKINKSNPQESKVPLAAMMYTEVERRLDVVLFRSCFADSVYEARRMVLHNAVKLNG 145 Query: 126 RSVNIGSYRCKEGDVIEVKQKS 147 R GD+I V S Sbjct: 146 VRCIAPWTRLHPGDMITVHPAS 167 >gi|283139281|gb|ADB12615.1| Rps4 [Hordelymus europaeus] Length = 63 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 144 KQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202 K + V ++ +P++++++ +I + + LVVE Sbjct: 1 KDNQRSKGLVQNYIASSDLGKLPKHLTIDTLEYKGLVNKILDRK---WVGLKINELLVVE 57 Query: 203 FYSR 206 +YSR Sbjct: 58 YYSR 61 >gi|126952025|gb|ABO28124.1| ribosomal protein S4 [Citrus sp. 'amboinensis'] gi|126952031|gb|ABO28127.1| ribosomal protein S4 [Citrus aurantium] gi|126952033|gb|ABO28128.1| ribosomal protein S4 [Citrus bergamia] gi|126952035|gb|ABO28129.1| ribosomal protein S4 [Citrus celebica] gi|126952063|gb|ABO28142.1| ribosomal protein S4 [Citrus maxima] gi|126952067|gb|ABO28144.1| ribosomal protein S4 [Citrus myrtifolia] gi|126952071|gb|ABO28146.1| ribosomal protein S4 [Citrus x paradisi] gi|126952080|gb|ABO28150.1| ribosomal protein S4 [Citrus sinensis] Length = 58 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|150402490|ref|YP_001329784.1| 30S ribosomal protein S4P [Methanococcus maripaludis C7] gi|171472890|sp|A6VGQ7|RS4_METM7 RecName: Full=30S ribosomal protein S4P gi|150033520|gb|ABR65633.1| ribosomal protein S4 [Methanococcus maripaludis C7] Length = 178 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 55/157 (35%), Gaps = 46/157 (29%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 RR+G K G Q + +G L K+++ K E + R+ Sbjct: 5 RRLG-------KKYDTPNHPWIGERIQSEREISQKYG--LVNKKELWKM-----ETQLRN 50 Query: 73 IFKEADRSRGDTSH--------------------------------NLISFLESRLDTIV 100 ++A + DT+ N+ S LE RL T+V Sbjct: 51 YRRQARKLISDTTTQGGKEAVQLFNVLKRYAILVEQEPTLDHVLSLNIESILERRLQTMV 110 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 Y+ T ARQF+ H H+ VNG+ V SY Sbjct: 111 YKKGLAKTAKQARQFIVHGHIAVNGKRVTSPSYLVSV 147 >gi|150399382|ref|YP_001323149.1| 30S ribosomal protein S4P [Methanococcus vannielii SB] gi|171460838|sp|A6UPW5|RS4_METVS RecName: Full=30S ribosomal protein S4P gi|150012085|gb|ABR54537.1| ribosomal protein S4 [Methanococcus vannielii SB] Length = 178 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 39/131 (29%) Query: 49 GLQLRAKQKMKKYYGDIS-------EKKFRSIFKEADRSRGDTSH--------------- 86 G +++ ++++ YG ++ E + R+ ++A + DT+ Sbjct: 20 GERIQKEREISHKYGLVNKKELWKMETQLRNYRRQARKLISDTTTQGGKEAVQLFNVLKR 79 Query: 87 -----------------NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 N+ S LE RL T+VYR T ARQ + H H+ VNGR V Sbjct: 80 YAILVEQEPTLDHILSLNIESILERRLQTLVYRKGLAKTAKQARQLIVHGHIAVNGRRVT 139 Query: 130 IGSYRCKEGDV 140 SY + Sbjct: 140 SPSYLVSVSEN 150 >gi|255721325|ref|XP_002545597.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240136086|gb|EER35639.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 461 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 27/154 (17%) Query: 41 RKSKPSYFGLQLRA-----KQKMKKYYG-DISEKKFRS-IFKEADRSRGD---------- 83 RK SYFG L K + +KY+G + EK F++ +F + ++ Sbjct: 30 RKDPLSYFGKTLYQQKWAAKSETRKYHGEHLREKHFKNVLFDKDLKTYSQLDASLKGRDV 89 Query: 84 ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 + LE RL+ ++R+ F ++ ARQF+ V VNG + S+ + GD Sbjct: 90 APTPITLQTFGTLEKRLEVALFRSMFASSLRQARQFILGGFVKVNGVVMKYPSFPLQSGD 149 Query: 140 VIEVKQKS------KQLASVLEASQLAERDVPEY 167 V V + K S+ +A + + + + Sbjct: 150 VFSVDPEKVLYALGKDKPSLEKALSVDRKQIKSW 183 >gi|159905736|ref|YP_001549398.1| 30S ribosomal protein S4 [Methanococcus maripaludis C6] gi|226699087|sp|A9A9Z3|RS4_METM6 RecName: Full=30S ribosomal protein S4P gi|159887229|gb|ABX02166.1| ribosomal protein S4 [Methanococcus maripaludis C6] Length = 178 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 25/47 (53%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 LE RL TIVYR T ARQF+ H H+ VNG+ V +Y Sbjct: 101 ILERRLQTIVYRKGLAKTAKQARQFIVHGHIAVNGKRVTAPAYLVSV 147 >gi|156936976|ref|YP_001434772.1| 30S ribosomal protein S4P [Ignicoccus hospitalis KIN4/I] gi|172044459|sp|A8A8W3|RS4_IGNH4 RecName: Full=30S ribosomal protein S4P gi|156565960|gb|ABU81365.1| SSU ribosomal protein S4P [Ignicoccus hospitalis KIN4/I] Length = 166 Score = 54.5 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 27/51 (52%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL T+VY+ +I+ ARQ V H H+ +NGR V Y + + Sbjct: 99 DLLERRLQTVVYKKGLAKSIYHARQLVTHGHIAINGRRVTSPGYIVRRDEE 149 >gi|224799244|gb|ACN63087.1| ribosomal protein S4 [Cornus nuttallii] Length = 65 Score = 54.5 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G L Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRX 56 Query: 61 YYG 63 + G Sbjct: 57 HXG 59 >gi|21228258|ref|NP_634180.1| 30S ribosomal protein S4P [Methanosarcina mazei Go1] gi|26399388|sp|Q8PV18|RS4_METMA RecName: Full=30S ribosomal protein S4P gi|20906715|gb|AAM31852.1| SSU ribosomal protein S4P [Methanosarcina mazei Go1] Length = 219 Score = 54.5 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 6/122 (4%) Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQF 115 +Y SE+ + + +++S LE RL T V R T+ ARQF Sbjct: 74 HYATQSEEILSKLIRYGIIKADANVDDILSLKTENILERRLQTQVLRLGLARTVIQARQF 133 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM 175 + H H+ +NGR I + D + + + E+ V +++ + + Sbjct: 134 ITHGHIAINGRKATIPGMLVSKEDEMHI-GYYGSSPLMSESHSERPVQVASFLADSATTL 192 Query: 176 VA 177 A Sbjct: 193 KA 194 >gi|321268723|gb|ADW79172.1| ribosomal protein S4 [Cyanophora paradoxa] Length = 447 Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 10/124 (8%) Query: 48 FGLQLRAKQKMKKYYGDISEKKFRSI-----FKEADRSRGDTSHNLISF-----LESRLD 97 F ++L K+ K +Y +++E + + ++ + + S N LESRLD Sbjct: 48 FNMKLYIKKIFKNFYPNLTEIQLKKYIGENIYQYLTKDKIKHSQNTQIIKIYHILESRLD 107 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157 T++ R V T AARQ + H++V V+ R + Y G +I +K+ + + + Sbjct: 108 TMLIRTNLVKTPKAARQLIMHKNVFVDNRLITNPGYLLSNGQIIHIKKINIVYLKIKINN 167 Query: 158 QLAE 161 + E Sbjct: 168 KNNE 171 >gi|154151763|ref|YP_001405381.1| 30S ribosomal protein S4P [Candidatus Methanoregula boonei 6A8] gi|171769717|sp|A7IAH7|RS4_METB6 RecName: Full=30S ribosomal protein S4P gi|154000315|gb|ABS56738.1| ribosomal protein S4 [Methanoregula boonei 6A8] Length = 185 Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 29/63 (46%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 + + LE RL T+VYR + ARQ V H H+ + GR V + Y G+ + Sbjct: 101 KVPAQLERRLQTLVYRKGLARSPKQARQLVTHGHIAIGGRRVTVPGYLVTRGEETTISYA 160 Query: 147 SKQ 149 K Sbjct: 161 GKS 163 >gi|330506854|ref|YP_004383282.1| 30S ribosomal protein S4 [Methanosaeta concilii GP-6] gi|328927662|gb|AEB67464.1| ribosomal protein S4 [Methanosaeta concilii GP-6] Length = 178 Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 34/72 (47%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RL T VYR ++ ARQF+ H H+ V+GR V++ Y G+ + + Sbjct: 102 LERRLQTQVYRQGLANSLKQARQFIVHGHIQVSGRRVDVPGYLVPRGEEMSIDYYMGSPM 161 Query: 152 SVLEASQLAERD 163 + + A R Sbjct: 162 ASEGHPERASRT 173 >gi|629415|pir||S47021 ribosomal protein S4 - Sulfolobus acidocaldarius gi|517288|emb|CAA56478.1| ribosomal protein S4 [Sulfolobus acidocaldarius] Length = 160 Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query: 64 DISEKKF-RSIFKEADRSRGDTSHNLI------SFLESRLDTIVYRAKFVPTIFAARQFV 116 +I EK+ + +++ + +++ + I ++LE RL TIVY+ TI+ ARQ + Sbjct: 56 NIREKQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLI 115 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDV 140 H H+ ++GR V Y G+ Sbjct: 116 THGHIAISGRKVTSPGYVVLRGEE 139 >gi|126952078|gb|ABO28149.1| ribosomal protein S4 [Citrus reticulata] Length = 58 Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + +++ KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRIEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|126952134|gb|ABO28177.1| ribosomal protein S4 [Murraya paniculata] Length = 58 Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 Y 61 + Sbjct: 57 H 57 >gi|110668836|ref|YP_658647.1| 30S ribosomal protein S4P [Haloquadratum walsbyi DSM 16790] gi|121687159|sp|Q18G54|RS4_HALWD RecName: Full=30S ribosomal protein S4P gi|109626583|emb|CAJ53047.1| ribosomal protein S4 [Haloquadratum walsbyi DSM 16790] Length = 175 Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 28/55 (50%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 ++ LE RL TIVYR T ARQF+ H H+ VNG V S +E + Sbjct: 96 GLDVSDILERRLQTIVYRQGLASTPKQARQFIVHEHITVNGARVTRPSKMVEETE 150 >gi|261279051|gb|ACX61709.1| ribosomal protein S4 [Tortella tortuosa] Length = 64 Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P S L+ ++ S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLSNKTPHLKSSSTNQLNSNKK---ISQYRIRLEEKQKLRF 57 Query: 61 YYG 63 +YG Sbjct: 58 HYG 60 >gi|126952114|gb|ABO28167.1| ribosomal protein S4 [Merope angulata] gi|126952148|gb|ABO28184.1| ribosomal protein S4 [Pleiospermium latialatum] Length = 58 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSYFRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|20089978|ref|NP_616053.1| 30S ribosomal protein S4P [Methanosarcina acetivorans C2A] gi|26399405|sp|Q8TRR1|RS4_METAC RecName: Full=30S ribosomal protein S4P gi|19914941|gb|AAM04533.1| ribosomal protein S4p [Methanosarcina acetivorans C2A] Length = 218 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQF 115 +Y SE+ + + +++S LE RL T V R T+ ARQF Sbjct: 73 HYRTQSEEILSKLIRYGIIKSDANIDDILSLKTENILERRLQTQVLRLGLARTVIQARQF 132 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164 + H H+ +NGR I + D + + L+ ER V Sbjct: 133 ITHGHIAINGRKATIPGMLVSKEDEMHIGYYGNSP---LKNESHPERPV 178 >gi|6172228|dbj|BAA85896.1| ribosomal protein HS4 [Halobacterium salinarum] Length = 169 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 34/72 (47%) Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + I E +R S + LE RL T+VYR T+ ARQFV+H HV V+G V Sbjct: 74 QRIGILSEEERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHGHVTVDGSRV 133 Query: 129 NIGSYRCKEGDV 140 SY + Sbjct: 134 TEPSYTVPVSEE 145 >gi|298674773|ref|YP_003726523.1| 30S ribosomal protein S4 [Methanohalobium evestigatum Z-7303] gi|298287761|gb|ADI73727.1| ribosomal protein S4 [Methanohalobium evestigatum Z-7303] Length = 184 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RL T V++ T+ ARQF+ H H+ VNGR V + S + + + + Sbjct: 105 ILERRLQTQVHKLGLARTLLQARQFITHGHIAVNGRKVTVPSKMITKDEEMTI 157 >gi|289191582|ref|YP_003457523.1| ribosomal protein S4 [Methanocaldococcus sp. FS406-22] gi|288938032|gb|ADC68787.1| ribosomal protein S4 [Methanocaldococcus sp. FS406-22] Length = 186 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 14/131 (10%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76 K + +G RRK + LR +++ ++ D +E+ + ++ K+ Sbjct: 21 KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLKK 80 Query: 77 --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + T +++S LE RL T+V+R T ARQ + H H+ VNGR V Sbjct: 81 YGILKVENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVT 140 Query: 130 IGSYRCKEGDV 140 SY + Sbjct: 141 APSYMVTVEEE 151 >gi|126952136|gb|ABO28178.1| ribosomal protein S4 [Naringi crenulata] Length = 58 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPCFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|15790214|ref|NP_280038.1| 30S ribosomal protein S4P [Halobacterium sp. NRC-1] gi|169235943|ref|YP_001689143.1| 30S ribosomal protein S4P [Halobacterium salinarum R1] gi|26399499|sp|Q9HQJ6|RS4_HALSA RecName: Full=30S ribosomal protein S4P gi|226699070|sp|B0R4Y0|RS4_HALS3 RecName: Full=30S ribosomal protein S4P gi|10580672|gb|AAG19518.1| 30S ribosomal protein S4P [Halobacterium sp. NRC-1] gi|167727009|emb|CAP13795.1| ribosomal protein S4 [Halobacterium salinarum R1] Length = 170 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 34/72 (47%) Query: 69 KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + I E +R S + LE RL T+VYR T+ ARQFV+H HV V+G V Sbjct: 75 QRIGILSEEERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHGHVTVDGSRV 134 Query: 129 NIGSYRCKEGDV 140 SY + Sbjct: 135 TEPSYTVPVSEE 146 >gi|242223228|ref|XP_002477270.1| predicted protein [Postia placenta Mad-698-R] gi|220723290|gb|EED77530.1| predicted protein [Postia placenta Mad-698-R] Length = 345 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 41/86 (47%) Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 + + E ++ + +E R+D +++RA F +++ AR+ V H VL+NG+ Sbjct: 112 KRLQNEREKGLAPVGSLMFREVERRIDVLLFRACFAHSVYEARRMVVHGDVLLNGKKHTN 171 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEA 156 + R GD+ V K+ + A Sbjct: 172 PNTRLAPGDMFSVDPKAIRFLQANAA 197 >gi|15668362|ref|NP_247158.1| 30S ribosomal protein S4P [Methanocaldococcus jannaschii DSM 2661] gi|1710769|sp|P54020|RS4_METJA RecName: Full=30S ribosomal protein S4P gi|1498964|gb|AAB98170.1| SSU ribosomal protein S4P (rpsD) [Methanocaldococcus jannaschii DSM 2661] Length = 187 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 14/131 (10%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76 K + +G RRK + LR +++ ++ D +E+ + ++ K+ Sbjct: 21 KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLKK 80 Query: 77 --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + T +++S LE RL T+V+R T ARQ + H H+ VNGR V Sbjct: 81 YGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVT 140 Query: 130 IGSYRCKEGDV 140 SY + Sbjct: 141 APSYMVTVEEE 151 >gi|150866939|ref|XP_001386705.2| hypothetical protein PICST_50481 [Scheffersomyces stipitis CBS 6054] gi|149388195|gb|ABN68676.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 471 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 9/140 (6%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK--KFRSIFKEADRSRGDTSHNLISFLE 93 + +Y G L K + K + E + + K + + + + LE Sbjct: 44 QKWNAKAETRAYHGEHLTEK-RWKAIFDPSLETVAQLDASLKGSKVAPTPMTLQTYASLE 102 Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS------ 147 RL+ V+R+ F ++ AR+F+ V VNG + S+ K GD+ VK + Sbjct: 103 KRLELAVFRSMFASSVRQAREFILGGSVSVNGVVIKHPSFPLKSGDIFHVKPEKVLLAMG 162 Query: 148 KQLASVLEASQLAERDVPEY 167 + S+ +A ++ + + + Sbjct: 163 RTKPSLEKAIKVDNQQISAW 182 >gi|296109382|ref|YP_003616331.1| ribosomal protein S4 [Methanocaldococcus infernus ME] gi|295434196|gb|ADG13367.1| ribosomal protein S4 [Methanocaldococcus infernus ME] Length = 183 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 14/152 (9%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76 K + +G RRK + LR +++ ++ D +E+ + ++ + Sbjct: 21 KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDTTEQGAKEAQQLFNVLRR 80 Query: 77 --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 R T ++++ LE RL T+V+R T ARQ + H H+ +NGR V Sbjct: 81 YGILRKDNPTLDDVLALTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAINGRRVT 140 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 + SY + + + + A+ Sbjct: 141 VPSYLVTVEEEDSIDYYKNSPFVNKDHPERAK 172 >gi|126952152|gb|ABO28186.1| ribosomal protein S4 [Ruta graveolens] Length = 58 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGSLPGLTSKRP----RAGSDFRNQSRSGKKSQYRIRLEEKQKLRF 56 Query: 61 Y 61 + Sbjct: 57 H 57 >gi|307352910|ref|YP_003893961.1| 30S ribosomal protein S4 [Methanoplanus petrolearius DSM 11571] gi|307156143|gb|ADN35523.1| ribosomal protein S4 [Methanoplanus petrolearius DSM 11571] Length = 182 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/45 (48%), Positives = 27/45 (60%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL TIVYR + ARQF+ H H+ VNGR + I YR + Sbjct: 106 LERRLQTIVYRKGLARSPKQARQFITHGHIAVNGRKLTIPGYRVR 150 >gi|126952006|gb|ABO28115.1| ribosomal protein S4 [Atalantia citroides] Length = 58 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q K S + ++L KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSHSVKKSQYRIRLEEKQKLRF 56 Query: 61 Y 61 + Sbjct: 57 H 57 >gi|1749714|dbj|BAA13914.1| unnamed protein product [Schizosaccharomyces pombe] Length = 327 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 15/127 (11%) Query: 53 RAKQKMKKYYGD-ISEKKFRSIFKEA---------DRSRGDTSHNLISFLESRLDTIVYR 102 AK++ + Y+G + E + ++ F+ D+ + +FLESRLD ++R Sbjct: 45 NAKKETRSYHGPQLREYQLKNAFRPKLEGVISSLDDKLPIPFMNQTYAFLESRLDMSIHR 104 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 A F AR V H V V+G+ GD++ V SV+ + Sbjct: 105 AFFASYALQARLLVLHGKVHVDGKPERRAYRPLLPGDLVTV-----DQKSVMNCVSASSN 159 Query: 163 DVPEYIS 169 + P + Sbjct: 160 NTPSILE 166 >gi|296243121|ref|YP_003650608.1| 30S ribosomal protein S4P [Thermosphaera aggregans DSM 11486] gi|296095705|gb|ADG91656.1| SSU ribosomal protein S4P [Thermosphaera aggregans DSM 11486] Length = 173 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + KE R + + LE RL TIVY+ TI+ ARQ + H H+ V GR + Sbjct: 82 LLKEGSRLEDALNLKVEDLLERRLQTIVYKKGLANTIYQARQLIVHGHIAVAGRRITSPG 141 Query: 133 YRCKEGDV 140 Y + Sbjct: 142 YIVSVEEE 149 >gi|159041669|ref|YP_001540921.1| 30S ribosomal protein S4P [Caldivirga maquilingensis IC-167] gi|189045367|sp|A8MDS5|RS4_CALMQ RecName: Full=30S ribosomal protein S4P gi|157920504|gb|ABW01931.1| ribosomal protein S4 [Caldivirga maquilingensis IC-167] Length = 181 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 LE RL T+VYR +I ARQ + H H+ +NG V Y Sbjct: 104 LERRLQTLVYRKGMARSIHEARQLIVHGHISINGVRVRSPGYLVPRN 150 >gi|50425337|ref|XP_461262.1| DEHA2F20988p [Debaryomyces hansenii CBS767] gi|49656931|emb|CAG89651.1| DEHA2F20988p [Debaryomyces hansenii] Length = 467 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 34/61 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 LE RL+ ++RA F ++ ARQF+ HV VNG V S+ + GDV VK + LA Sbjct: 101 LEKRLEFALFRAMFASSVRQARQFILGGHVKVNGVVVKHPSFPLQSGDVFNVKPEKVLLA 160 Query: 152 S 152 Sbjct: 161 M 161 >gi|126952037|gb|ABO28130.1| ribosomal protein S4 [Citrus gracilis] Length = 59 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L K K+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKTKIAF 56 Query: 61 YY 62 + Sbjct: 57 SF 58 >gi|124486066|ref|YP_001030682.1| 30S ribosomal protein S4P [Methanocorpusculum labreanum Z] gi|152112228|sp|A2SSV9|RS4_METLZ RecName: Full=30S ribosomal protein S4P gi|124363607|gb|ABN07415.1| SSU ribosomal protein S4P [Methanocorpusculum labreanum Z] Length = 181 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 LE RL TIVYR + ARQ + H H+ +NG+ V++ SY + + + Sbjct: 104 DILERRLQTIVYRKGLARSPKQARQLITHGHIAINGQRVSVPSYMVSIAEEAGIMYYATS 163 >gi|91772119|ref|YP_564811.1| 30S ribosomal protein S4 [Methanococcoides burtonii DSM 6242] gi|121689437|sp|Q12ZR5|RS4_METBU RecName: Full=30S ribosomal protein S4P gi|91711134|gb|ABE51061.1| SSU ribosomal protein S4P [Methanococcoides burtonii DSM 6242] Length = 184 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + LE RL T V+R T ARQF+ H H+ ++G+ V + + V Sbjct: 99 GLQTEAILERRLQTQVHRLGLARTARQARQFITHGHIAIDGKRVTVPGMMVTREQEMNV 157 >gi|327400270|ref|YP_004341109.1| 30S ribosomal protein S4 [Archaeoglobus veneficus SNP6] gi|327315778|gb|AEA46394.1| ribosomal protein S4 [Archaeoglobus veneficus SNP6] Length = 179 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 34/74 (45%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 FLE RL T+VYR TI ARQ + H H+ V+GR V Y ++ + + Sbjct: 105 DFLERRLQTMVYRQGLANTIKQARQLIVHGHIAVDGRRVTAPGYIVEKDEESRITYYRNS 164 Query: 150 LASVLEASQLAERD 163 + E AE + Sbjct: 165 PFAKRELVAKAEAE 178 >gi|73667629|ref|YP_303644.1| 30S ribosomal protein S4P [Methanosarcina barkeri str. Fusaro] gi|90101692|sp|Q46GC8|RS4_METBF RecName: Full=30S ribosomal protein S4P gi|72394791|gb|AAZ69064.1| SSU ribosomal protein S4P [Methanosarcina barkeri str. Fusaro] Length = 216 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + LE RL T V R T+ ARQF+ H H+ +NGR + + D + + + Sbjct: 107 NILERRLQTQVLRLGLARTVVQARQFITHGHIAINGRKATVPGMLVSKEDEMHIGYYATS 166 >gi|256810445|ref|YP_003127814.1| ribosomal protein S4 [Methanocaldococcus fervens AG86] gi|256793645|gb|ACV24314.1| ribosomal protein S4 [Methanocaldococcus fervens AG86] Length = 184 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 14/140 (10%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76 K + +G RRK + LR +++ ++ D +E+ + ++ K+ Sbjct: 21 KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLKK 80 Query: 77 --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + T +++S LE RL T+V+R T ARQ + H H+ VNGR V Sbjct: 81 YNILKVENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVT 140 Query: 130 IGSYRCKEGDVIEVKQKSKQ 149 SY + ++ Sbjct: 141 APSYLVTVEEEDKITYAKNS 160 >gi|303244310|ref|ZP_07330647.1| ribosomal protein S4 [Methanothermococcus okinawensis IH1] gi|302485437|gb|EFL48364.1| ribosomal protein S4 [Methanothermococcus okinawensis IH1] Length = 177 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 32/68 (47%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + KE S N+ S L RL T+V+R T ARQF+ H H+ VNGR V S Sbjct: 83 LIKEDASLDDVLSLNVESILNRRLQTLVFRKGLAKTPKQARQFIVHGHIAVNGRRVTSPS 142 Query: 133 YRCKEGDV 140 Y + Sbjct: 143 YLVPSDEE 150 >gi|310796626|gb|EFQ32087.1| S4 domain-containing protein [Glomerella graminicola M1.001] Length = 539 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 32/56 (57%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 LE RLD ++RA F + A+QF H V VNG+ + G+Y+ GD+ +V S Sbjct: 172 LERRLDVAIFRAMFASSTLQAKQFCTHGAVKVNGKPMRYGAYKLNPGDMFQVDIDS 227 >gi|302423224|ref|XP_003009442.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261352588|gb|EEY15016.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 470 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 28/52 (53%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RL+ ++RA F + ARQF H V VNG+ + Y GD+ +V Sbjct: 152 LERRLEVAIFRAMFASSTLQARQFCIHGAVRVNGQLMRSPGYLLNPGDMFQV 203 >gi|260944778|ref|XP_002616687.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720] gi|238850336|gb|EEQ39800.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720] Length = 468 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 8/160 (5%) Query: 18 NLWGRPKSPVNTRSYGP--GLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIF 74 NL+ K P ++ +Y G L ++ K S + + Sbjct: 24 NLFNLYKKPQIRYQGKSLFQQKWTAKQETRAYHGEHLTERRWKTLFNPSLESVAQLDASL 83 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 K D + + LE RL+ ++R+ F ++ AR+F+ + HV VNG ++ ++ Sbjct: 84 KGVDVAPTPMPLQTFAALEKRLEFALFRSMFASSVRQAREFIKNGHVKVNGVTIKHPAFP 143 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174 K GD+ S V+ A + V E I V+ Sbjct: 144 LKSGDIF-----SVNPEKVMLAMGRVKPSVAEAIKVDKKQ 178 >gi|76096797|gb|ABA39285.1| ribosomal protein S4-like [Microsorum vieillardii] Length = 78 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSL 186 I SYRCK D+I V+ + ++ ++ P+++++ D I Sbjct: 1 IPSYRCKPKDIITVRNRPTSYNALRNKFTRGDKT-PDHLAISLSEDDKPTGLVNCI---A 56 Query: 187 KDVPYPVIMQPNLVVEFYSR 206 + + LVVE+YSR Sbjct: 57 NRESVNLNINELLVVEYYSR 76 >gi|241958516|ref|XP_002421977.1| mitochondrial ribosome protein precursor, small subunit [Candida dubliniensis CD36] gi|223645322|emb|CAX39978.1| mitochondrial ribosome protein precursor, small subunit [Candida dubliniensis CD36] Length = 461 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 27/154 (17%) Query: 41 RKSKPSYFGLQLRA-----KQKMKKYYGD-ISEKKFRS-IFKEADRSRGD---------- 83 RK YFG L K + + Y+G I EK+F++ +F ++ Sbjct: 30 RKDPLQYFGKTLYQQKWAAKTETRNYHGQQIKEKRFKNVLFDSNLKTYSQLDASLKGHDV 89 Query: 84 ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 + LE RL+ ++R+ F ++ ARQF+ +V VNG + S+ + GD Sbjct: 90 APTPITLQTYGTLEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGD 149 Query: 140 VIEVKQKS------KQLASVLEASQLAERDVPEY 167 V V + K S+ +A + ++ + ++ Sbjct: 150 VFSVDPEKVLFALGKTKPSLEKALSVDKKQIKKW 183 >gi|292559479|ref|YP_003540847.1| ribosomal protein S4 [Hartmannella vermiformis] gi|290775732|gb|ADD62231.1| ribosomal protein S4 [Hartmannella vermiformis] Length = 230 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%) Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 + Q +K +Y IS+++ K + S G N + +ESR+ TI+YR ++P I Sbjct: 77 SMQLVKLFYKGISQRRVYKFSKLSSASFGLWVDNFLLLIESRVSTILYRVNWIPNILFLN 136 Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYIS 169 QF+ H +L++ + ++ K +I + +L + P YI Sbjct: 137 QFLAHGDILIDSKVPTTVNFMVKMFQLIRPLPSIQSKLRFNFHLRLINNMVYFNTPRYIF 196 Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQ 196 +N M A R PS L D+ +PV++ Sbjct: 197 MNSKIMFACIFRNPS-LSDISFPVLLD 222 >gi|222480229|ref|YP_002566466.1| ribosomal protein S4 [Halorubrum lacusprofundi ATCC 49239] gi|222453131|gb|ACM57396.1| ribosomal protein S4 [Halorubrum lacusprofundi ATCC 49239] Length = 175 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + LE RL T+ YR F + ARQF+ H H+ V+G V S + D Sbjct: 99 VTDLLERRLQTVAYRQGFASSTQQARQFIVHGHITVDGARVTRPSVKVDVDDE 151 >gi|68476945|ref|XP_717450.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314] gi|68477136|ref|XP_717361.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314] gi|46439070|gb|EAK98392.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314] gi|46439163|gb|EAK98484.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314] Length = 461 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%) Query: 41 RKSKPSYFGLQLRA-----KQKMKKYYGD-ISEKKFRS-IFKEADRSRGD---------- 83 RK YFG L K + + Y+G I EK+F++ +F ++ Sbjct: 30 RKDPLQYFGKTLYQQKWAAKTETRNYHGQQIKEKRFKNVLFDSNLKTYSQLDASLKGHDV 89 Query: 84 ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 + LE RL+ ++R+ F ++ ARQF+ +V VNG + S+ + GD Sbjct: 90 APTPITLQTYGTLEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGD 149 Query: 140 VIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 V S VL A + + + +SV+ + Sbjct: 150 VF-----SVDPEKVLFALGKTKPSLEKALSVDKKQIK 181 >gi|327311847|ref|YP_004338744.1| 30S ribosomal protein S4 [Thermoproteus uzoniensis 768-20] gi|326948326|gb|AEA13432.1| ribosomal protein S4 [Thermoproteus uzoniensis 768-20] Length = 171 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 25/46 (54%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL TIVYR F T + ARQ + H H+ +NGR V + Sbjct: 103 ILERRLQTIVYRKGFAKTPYQARQLITHGHIAINGRRVRSPGFLVP 148 >gi|238879875|gb|EEQ43513.1| conserved hypothetical protein [Candida albicans WO-1] Length = 461 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%) Query: 41 RKSKPSYFGLQLRA-----KQKMKKYYGD-ISEKKFRS-IFKEADRSRGD---------- 83 RK YFG L K + + Y+G I EK+F++ +F ++ Sbjct: 30 RKDPLQYFGKTLYQQKWAAKTETRNYHGQQIKEKRFKNVLFDSNLKTYSQLDASLKGHDV 89 Query: 84 ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 + LE RL+ ++R+ F ++ ARQF+ +V VNG + S+ + GD Sbjct: 90 APTPITLQTYGTLEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGD 149 Query: 140 VIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176 V S VL A + + + +SV+ + Sbjct: 150 VF-----SVDPEKVLFALGKTKPSLEKALSVDKKQIK 181 >gi|11499865|ref|NP_071109.1| 30S ribosomal protein S4 [Archaeoglobus fulgidus DSM 4304] gi|3914900|sp|O28000|RS4_ARCFU RecName: Full=30S ribosomal protein S4P gi|2648246|gb|AAB88980.1| SSU ribosomal protein S4P (rps4P) [Archaeoglobus fulgidus DSM 4304] Length = 172 Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 27/47 (57%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T+VYR TI ARQF+ H H+ V+GR V S+ Sbjct: 105 DFLERRLQTMVYRQGLARTIKQARQFITHGHIAVDGRRVTSPSFIVT 151 >gi|126952130|gb|ABO28175.1| ribosomal protein S4 [Micromelum minutum] Length = 58 Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + RR+G K P G Q R K S + ++L KQK++ Sbjct: 1 MSRYRGPRFIKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56 Query: 61 YY 62 +Y Sbjct: 57 HY 58 >gi|197941028|gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana] Length = 362 Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QL+ +K+ +YGD+ + K + LE+R D I+ R F+ TI Sbjct: 67 IQLQTTRKLSLFYGDLPITEMHRGTKRTSYIP------FLLNLETRFDVILLRLHFLETI 120 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V VN V+I ++ GD+I ++ Sbjct: 121 PQARQLISHRRVCVNKGMVSITHFKLSHGDIISFQEN 157 >gi|297527614|ref|YP_003669638.1| ribosomal protein S4 [Staphylothermus hellenicus DSM 12710] gi|297256530|gb|ADI32739.1| ribosomal protein S4 [Staphylothermus hellenicus DSM 12710] Length = 168 Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 27/64 (42%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + E + LE RL TIVY+ TI+ ARQ + H H+ + GR V Sbjct: 82 LLHENATLEDVLGLTVEDLLERRLQTIVYKKGLARTIYHARQLIVHGHIAIAGRRVTSPG 141 Query: 133 YRCK 136 Y Sbjct: 142 YIVS 145 >gi|126952004|gb|ABO28114.1| ribosomal protein S4 [Atalantia ceylanica] Length = 57 Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 4/61 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLVF 56 Query: 61 Y 61 Sbjct: 57 I 57 >gi|58699943|ref|ZP_00374527.1| ribosomal protein S4 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533543|gb|EAL57958.1| ribosomal protein S4 [Wolbachia endosymbiont of Drosophila ananassae] Length = 45 Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ER P+Y+ + ++R P +VPY M+ NLVVEFYSR Sbjct: 1 ERKAPDYLEADSKEHSVKYLRSPQ-YSEVPYSADMEVNLVVEFYSR 45 >gi|119719176|ref|YP_919671.1| 30S ribosomal protein S4P [Thermofilum pendens Hrk 5] gi|152112271|sp|A1RWT8|RS4_THEPD RecName: Full=30S ribosomal protein S4P gi|119524296|gb|ABL77668.1| SSU ribosomal protein S4P [Thermofilum pendens Hrk 5] Length = 172 Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 24/49 (48%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL TIVYR TI ARQ + H H+ VN R V Y + Sbjct: 102 LERRLQTIVYRKGLATTIRHARQLITHGHIAVNSRRVRSPGYLVSRDEE 150 >gi|224365672|ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209954196|emb|CAQ77661.1| ribosomal protein S4 [Vitis vinifera] gi|239764730|gb|ACS15201.1| ribosomal protein S4 [Vitis vinifera] Length = 362 Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 22/164 (13%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y +Q + +K+ ++GD+ + + Sbjct: 48 NKKRSIKRKIYP---------RDNLNSYIQSQTTRKLPLFHGDLPITEMHR------GTE 92 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 ++ LE+R D I R F TI ARQ ++HR V VN R V+I + GD+I Sbjct: 93 RNSYILFPLNLETRSDVIPVRLHFCETIPQARQPISHRRVCVNNRMVSITHLKVSHGDII 152 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 ++ ++ YI ++ + ++ F+ P Sbjct: 153 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFLDHPVR 189 >gi|284162136|ref|YP_003400759.1| ribosomal protein S4 [Archaeoglobus profundus DSM 5631] gi|284012133|gb|ADB58086.1| ribosomal protein S4 [Archaeoglobus profundus DSM 5631] Length = 169 Score = 51.5 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 FLE RL T+VYR TI ARQ + H H+ ++GR V SY + + ++ Sbjct: 105 DFLERRLQTVVYRQGLARTIKQARQLITHGHIAIDGRRVTSPSYIVERDEETKIGFYPNS 164 >gi|332157866|ref|YP_004423145.1| 30S ribosomal protein S4 [Pyrococcus sp. NA2] gi|331033329|gb|AEC51141.1| 30S ribosomal protein S4 [Pyrococcus sp. NA2] Length = 180 Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 25/46 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL TIVYR T+ ARQ + H H+ VNG+ + SY Sbjct: 99 DILERRLQTIVYRKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLV 144 >gi|149239088|ref|XP_001525420.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450913|gb|EDK45169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 460 Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 2/114 (1%) Query: 36 LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK--KFRSIFKEADRSRGDTSHNLISFLE 93 + +Y G L+ K+ K + + + + K + + + LE Sbjct: 44 QKWTAKSETRAYHGEHLKEKRFKKVLFDPELKTYSQLDASLKGEAVAPTPITLQTYAALE 103 Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 RL+ V+R+ F ++ ARQF+ V VNG + S+ K GDV V + Sbjct: 104 KRLEFAVFRSMFASSVRQARQFILGGFVKVNGVKIRHPSFPLKSGDVFSVDPEK 157 >gi|126952165|gb|ABO28192.1| ribosomal protein S4 [Wenzelia dolichophylla] Length = 58 Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 4/61 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEENKNCVF 56 Query: 61 Y 61 Sbjct: 57 I 57 >gi|219852959|ref|YP_002467391.1| 30S ribosomal protein S4P [Methanosphaerula palustris E1-9c] gi|254764598|sp|B8GEG7|RS4_METPE RecName: Full=30S ribosomal protein S4P gi|219547218|gb|ACL17668.1| ribosomal protein S4 [Methanosphaerula palustris E1-9c] Length = 181 Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 26/50 (52%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 LE RL T+VYR + ARQ V H H+ + GR V+I SYR Sbjct: 106 LERRLQTMVYRQGLARSPKQARQMVTHGHIAIAGRRVDIPSYRVPRDQET 155 >gi|76802057|ref|YP_327065.1| 30S ribosomal protein S4P [Natronomonas pharaonis DSM 2160] gi|90101697|sp|Q3IQT8|RS4_NATPD RecName: Full=30S ribosomal protein S4P gi|76557922|emb|CAI49506.1| ribosomal protein S4 [Natronomonas pharaonis DSM 2160] Length = 174 Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 27/53 (50%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + LE RL T+ YR T ARQF+ H HV VNG V+ SY+ + Sbjct: 99 VTDILERRLQTVAYRKGLGNTPQQARQFIAHGHVTVNGARVSAPSYKVDVAEE 151 >gi|41615041|ref|NP_963539.1| 30S ribosomal protein S4P [Nanoarchaeum equitans Kin4-M] gi|61215657|sp|Q74NF7|RS4_NANEQ RecName: Full=30S ribosomal protein S4P gi|40068765|gb|AAR39100.1| NEQ247 [Nanoarchaeum equitans Kin4-M] Length = 180 Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 29/49 (59%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL T++ R T+ ARQF+ H H++VNG V+ SY K+ + Sbjct: 100 LERRLQTMLVRKGLAKTMKQARQFIVHGHIMVNGEVVDAPSYLVKKEEE 148 >gi|112799402|gb|ABI23026.1| ribosomal protein small subunit S9 [Candidatus Micrarchaeum acidiphilum ARMAN-2] gi|255513948|gb|EET90213.1| ribosomal protein S4 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 187 Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T+V++ TI ARQ + H + VN + V+I Y Sbjct: 99 LERRLQTVVFKKGLARTIKQARQLITHGFIAVNMKRVSIPGYMVT 143 >gi|57641440|ref|YP_183918.1| 30S ribosomal protein S4 [Thermococcus kodakarensis KOD1] gi|73919022|sp|Q5JJF2|RS4_PYRKO RecName: Full=30S ribosomal protein S4P gi|57159764|dbj|BAD85694.1| SSU ribosomal protein S4P [Thermococcus kodakarensis KOD1] Length = 180 Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 24/44 (54%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL TIVYR T+ ARQ + H H+ VNG+ + Y Sbjct: 101 LERRLQTIVYRKGLARTMKQARQLIVHGHIEVNGQVIRSPGYLV 144 >gi|126465713|ref|YP_001040822.1| 30S ribosomal protein S4P [Staphylothermus marinus F1] gi|152112263|sp|A3DMQ4|RS4_STAMF RecName: Full=30S ribosomal protein S4P gi|126014536|gb|ABN69914.1| SSU ribosomal protein S4P [Staphylothermus marinus F1] Length = 168 Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + E + LE RL TIVY+ TI+ ARQ + H H+ + GR + Sbjct: 82 LLHENASLEDVLGLTVEDLLERRLQTIVYKKGLARTIYHARQLIIHGHIAIAGRRITSPG 141 Query: 133 YRCK 136 Y Sbjct: 142 YIVS 145 >gi|112253922|ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1| ribosomal protein S4 [Brassica napus] Length = 362 Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QL+ +K+ +YGD+ + K + LE+R D I+ R F+ TI Sbjct: 67 IQLQTTRKLSLFYGDLPITEMHRGTKRTSYIP------FLLNLETRFDVILLRLHFLETI 120 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V VN V+I + GD+I ++ Sbjct: 121 PQARQLISHRRVCVNKGMVSITHLKLSHGDIISFQEN 157 >gi|321248591|ref|XP_003191176.1| nam9 protein, mitochondrial precursor [Cryptococcus gattii WM276] gi|317457643|gb|ADV19389.1| nam9 protein, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 317 Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 R L + +E RLD +++R+ F ++ AR++V HV +NG+ + + GDV Sbjct: 129 RAPVGTMLFADVERRLDVLIFRSCFAQNVWEARRYVVQGHVKLNGQVIRNPNIMLNPGDV 188 Query: 141 IEVKQKS--KQLASVLEASQLAERDV 164 V A ++ Q AE DV Sbjct: 189 FTVNPSQIVMLQAPKSKSQQSAEGDV 214 >gi|58263106|ref|XP_568963.1| nam9 protein, mitochondrial precursor [Cryptococcus neoformans var. neoformans JEC21] gi|57223613|gb|AAW41656.1| nam9 protein, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 317 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%) Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 R L + +E RLD +++R+ F ++ AR++V HV +NG+ + + GDV Sbjct: 129 RAPVGTMLFADIERRLDVLIFRSCFAQNVWEARRYVVQGHVKLNGQVMRNPNIMLNPGDV 188 Query: 141 IEVKQKS 147 V Sbjct: 189 FTVNPSQ 195 >gi|257076681|ref|ZP_05571042.1| 30S ribosomal protein S4 [Ferroplasma acidarmanus fer1] Length = 195 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 23/161 (14%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGP-GLHGQRRKSKPS----YFGLQLRAKQK 57 + + +H W + + + GL +R K + Q R Q Sbjct: 10 RYSTPRH---------PWEKERIDSERQVVAKYGLKNKRELWKAEAILSSYRAQARTLQA 60 Query: 58 MKKYYGDISEKKFRSIFK---------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108 +Y I+EK+F+ + K E + N+ + L+ RL T+VY+ T Sbjct: 61 KVRYNDPIAEKQFQLLLKKLDKLSLLSEGATLDDILALNIENILDRRLQTLVYQLNMATT 120 Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + ARQ + H H+ V V I S +G + K Sbjct: 121 MKQARQLITHGHIKVGDHIVTIPSIAVLKGQEDSITYSEKS 161 >gi|134107834|ref|XP_777299.1| hypothetical protein CNBB1020 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259989|gb|EAL22652.1| hypothetical protein CNBB1020 [Cryptococcus neoformans var. neoformans B-3501A] Length = 317 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%) Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 R L + +E RLD +++R+ F ++ AR++V HV +NG+ + + GDV Sbjct: 129 RAPVGTMLFADIERRLDVLIFRSCFAQNVWEARRYVVQGHVKLNGQVMRNPNIMLNPGDV 188 Query: 141 IEVKQKS 147 V Sbjct: 189 FTVNPSQ 195 >gi|325969209|ref|YP_004245401.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28] gi|323708412|gb|ADY01899.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28] Length = 179 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 26/48 (54%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 L+ RL +IVYR TI+ ARQ V H H+ V+GR V Y G Sbjct: 103 ILDRRLQSIVYRRGLAKTIYEARQLVTHGHIAVDGRVVKSPGYLVPRG 150 >gi|261403747|ref|YP_003247971.1| ribosomal protein S4 [Methanocaldococcus vulcanius M7] gi|261370740|gb|ACX73489.1| ribosomal protein S4 [Methanocaldococcus vulcanius M7] Length = 186 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 14/131 (10%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76 K + +G RRK + LR +++ ++ D +E+ + ++ ++ Sbjct: 21 KDRIEREKELCKKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLRK 80 Query: 77 --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + T +++S LE RL T+V+R T ARQ + HRH+ V+GR V Sbjct: 81 YGILKIEDPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIIHRHIAVDGRVVT 140 Query: 130 IGSYRCKEGDV 140 SY + Sbjct: 141 SPSYMVSVEEE 151 >gi|254172951|ref|ZP_04879625.1| ribosomal protein S4 [Thermococcus sp. AM4] gi|214033107|gb|EEB73935.1| ribosomal protein S4 [Thermococcus sp. AM4] Length = 180 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL T+VY+ TI ARQ + H H+ VNG+ + Y Sbjct: 101 LERRLQTLVYKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLV 144 >gi|240104025|ref|YP_002960334.1| 30S ribosomal protein S4P [Thermococcus gammatolerans EJ3] gi|259495300|sp|C5A251|RS4_THEGJ RecName: Full=30S ribosomal protein S4P gi|239911579|gb|ACS34470.1| SSU ribosomal protein S4P (rps4P) [Thermococcus gammatolerans EJ3] Length = 180 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL T+VY+ TI ARQ + H H+ VNG+ + Y Sbjct: 101 LERRLQTLVYKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLV 144 >gi|323649909|ref|YP_004237282.1| ribosomal protein S4 [Ricinus communis] gi|322394289|gb|ADW96046.1| ribosomal protein S4 [Ricinus communis] Length = 352 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 22/164 (13%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y + +Q + +K+ ++GD+ + + Sbjct: 38 NKKKDIKRKIYP---------RENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP 88 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 + E+R D I R F TI ARQ ++HR V VN V+I + GD+I Sbjct: 89 ------FLLNPETRSDVIPVRLHFCETIPQARQPISHRRVCVNNGMVSITHLKVSHGDII 142 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 K ++ + E YI ++ + ++ F+ P Sbjct: 143 SFKANDARI-------RGEEIRRFFYIEISVEKIIGKFLDHPVR 179 >gi|305662632|ref|YP_003858920.1| SSU ribosomal protein S4P [Ignisphaera aggregans DSM 17230] gi|304377201|gb|ADM27040.1| SSU ribosomal protein S4P [Ignisphaera aggregans DSM 17230] Length = 168 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 66 SEKKFRSIFKEADRS----------RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 EK+F+ + ++ ++ + L+ RL T+V++ TI ARQ Sbjct: 66 REKQFKQLVRKLYNLGILKSENVDINDILGLSVEAILDRRLQTLVWKKGLAKTIHQARQL 125 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDV 140 + H H+ + GR V Y + Sbjct: 126 IVHGHIAIKGRRVTSPGYLVPIDEE 150 >gi|300711113|ref|YP_003736927.1| 30S ribosomal protein S4P [Halalkalicoccus jeotgali B3] gi|299124796|gb|ADJ15135.1| 30S ribosomal protein S4P [Halalkalicoccus jeotgali B3] Length = 174 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + LE RL T+ YR T ARQF+ H HV V+G+ V + SY + Sbjct: 99 VTDLLERRLQTVAYRKGVGNTPKQARQFIAHGHVTVDGQRVTVPSYMVEVSQE 151 >gi|268309108|gb|ACY95512.1| ribosomal protein S4 [Dicranum scoparium] Length = 57 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + +I RR+G K+P ++ K S + ++L KQK++ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57 >gi|126952146|gb|ABO28183.1| ribosomal protein S4 [Paramignya scandens] Length = 59 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 4/60 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L K+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEENTKIAF 56 >gi|315229893|ref|YP_004070329.1| 30S ribosomal protein S9e (S4p) [Thermococcus barophilus MP] gi|315182921|gb|ADT83106.1| SSU ribosomal protein S9e (S4p) [Thermococcus barophilus MP] Length = 181 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL T+VY+ TI ARQ + H H+ VNG+ + SY Sbjct: 99 DILERRLQTLVYKKGLARTIKQARQLIVHGHIEVNGQIIRSPSYLV 144 >gi|288931230|ref|YP_003435290.1| ribosomal protein S4 [Ferroglobus placidus DSM 10642] gi|288893478|gb|ADC65015.1| ribosomal protein S4 [Ferroglobus placidus DSM 10642] Length = 171 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 28/51 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 FLE RL TIVYR TI ARQ + H H+ + GR V SY ++ + Sbjct: 105 DFLERRLQTIVYRMGLANTIKQARQLIVHGHIAIAGRRVTSPSYIVEKDEE 155 >gi|146422017|ref|XP_001486951.1| hypothetical protein PGUG_00328 [Meyerozyma guilliermondii ATCC 6260] gi|146388072|gb|EDK36230.1| hypothetical protein PGUG_00328 [Meyerozyma guilliermondii ATCC 6260] Length = 465 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS---- 147 LE RL+ ++RA F ++ ARQ++ + +V VNG + S+ K GD+ V + Sbjct: 101 LEKRLEFAMFRAMFASSVRQARQYILNGYVKVNGVIIKHPSFPLKSGDIFSVIPEKVLTA 160 Query: 148 --KQLASVLEASQLAERDVPEY 167 + SV +A + + + Sbjct: 161 MGRTKPSVQKAISVDSTQIAAW 182 >gi|2500402|sp|Q31708|RT04_ARATH RecName: Full=Ribosomal protein S4, mitochondrial Length = 362 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QL+ +K+ +YGD+ + K + LE+R D I R F+ TI Sbjct: 67 IQLQTTRKLPFFYGDLPITEMHRGTKRTSYIP------FLLNLETRFDVIPLRLYFLETI 120 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V VN V+I ++ GD+I ++ Sbjct: 121 PQARQLISHRRVCVNKGMVSITHFKLSHGDIISFQEN 157 >gi|322369536|ref|ZP_08044101.1| 30S ribosomal protein S4P [Haladaptatus paucihalophilus DX253] gi|320551268|gb|EFW92917.1| 30S ribosomal protein S4P [Haladaptatus paucihalophilus DX253] Length = 173 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 29/49 (59%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL T+ YR T ARQF+ H HV V+G+ V++ SY+ + + Sbjct: 101 LERRLQTVAYRKGLAHTPKQARQFITHGHVTVDGQRVSVPSYKVEIDEE 149 >gi|242398331|ref|YP_002993755.1| 30S ribosomal protein S4P [Thermococcus sibiricus MM 739] gi|259495301|sp|C6A1B1|RS4_THESM RecName: Full=30S ribosomal protein S4P gi|242264724|gb|ACS89406.1| 30S ribosomal protein S4P [Thermococcus sibiricus MM 739] Length = 180 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL T+V++ TI ARQ + H H+ VNG+ + SY Sbjct: 99 DILERRLQTLVFKKGLARTIKQARQLIVHGHIEVNGQIIRSPSYLV 144 >gi|294495900|ref|YP_003542393.1| 30S ribosomal protein S4P [Methanohalophilus mahii DSM 5219] gi|292666899|gb|ADE36748.1| SSU ribosomal protein S4P [Methanohalophilus mahii DSM 5219] Length = 184 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 N LE RL T+V+R T ARQF+ H H+ ++G+ + + + D + + Sbjct: 101 NTEVILERRLQTLVHRLGLARTPKQARQFITHGHIAIDGKKLTVPGMLVSKQDEMMI 157 >gi|88604134|ref|YP_504312.1| 30S ribosomal protein S4P [Methanospirillum hungatei JF-1] gi|121721493|sp|Q2FT97|RS4_METHJ RecName: Full=30S ribosomal protein S4P gi|88189596|gb|ABD42593.1| SSU ribosomal protein S4P [Methanospirillum hungatei JF-1] Length = 181 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L+ RL T VYR F + ARQF+ H H+ + GR V I Y + Sbjct: 104 QQLDRRLQTQVYRRGFARSPKQARQFITHGHIAIGGRRVTIPGYTVSAKEQ 154 >gi|126952056|gb|ABO28139.1| ribosomal protein S4 [Citrus limonia] Length = 59 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L K K+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKTKIAF 56 >gi|14520744|ref|NP_126219.1| 30S ribosomal protein S4P [Pyrococcus abyssi GE5] gi|18978021|ref|NP_579378.1| 30S ribosomal protein S4 [Pyrococcus furiosus DSM 3638] gi|48429105|sp|P61992|RS4_PYRAB RecName: Full=30S ribosomal protein S4P gi|48429106|sp|P61993|RS4_PYRFU RecName: Full=30S ribosomal protein S4P gi|5457960|emb|CAB49450.1| rps4P SSU ribosomal protein S4P [Pyrococcus abyssi GE5] gi|18893804|gb|AAL81773.1| SSU ribosomal protein S4P [Pyrococcus furiosus DSM 3638] Length = 180 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL TIVY+ T+ ARQ + H H+ VNG+ + SY Sbjct: 99 DILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLV 144 >gi|170291191|ref|YP_001738007.1| 30S ribosomal protein S4P [Candidatus Korarchaeum cryptofilum OPF8] gi|226699077|sp|B1L795|RS4_KORCO RecName: Full=30S ribosomal protein S4P gi|170175271|gb|ACB08324.1| ribosomal protein S4 [Candidatus Korarchaeum cryptofilum OPF8] Length = 166 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 FLE RL TIV+R F + + ARQ + H H+ VNGR + SY K + +++ Sbjct: 98 QFLERRLQTIVWRKGFAKSPYMARQLITHGHIRVNGRRIRQPSYLVKIEEEDKIECLHPS 157 Query: 150 LASVLE 155 V + Sbjct: 158 CLEVEK 163 >gi|307594976|ref|YP_003901293.1| 30S ribosomal protein S4 [Vulcanisaeta distributa DSM 14429] gi|307550177|gb|ADN50242.1| ribosomal protein S4 [Vulcanisaeta distributa DSM 14429] Length = 182 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 25/45 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 L+ RL TIVYR TI+ ARQ V H H+ V+GR V Y Sbjct: 104 LDRRLQTIVYRKGLARTIYEARQLVTHGHIAVDGRVVRSPGYLVP 148 >gi|126952069|gb|ABO28145.1| ribosomal protein S4 [Citrus obovoidea] Length = 58 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 4/61 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S + ++L KQK+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKQKLVF 56 Query: 61 Y 61 Sbjct: 57 I 57 >gi|297618743|ref|YP_003706848.1| ribosomal protein S4 [Methanococcus voltae A3] gi|297377720|gb|ADI35875.1| ribosomal protein S4 [Methanococcus voltae A3] Length = 177 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 32/102 (31%) Query: 67 EKKFRSIFKEADRSRGDTSH--------------------------------NLISFLES 94 E + R+ ++A + +T+ N+ + L+ Sbjct: 45 ETQLRNYRRQARKLISNTTAQGVKEAIQLFAVLKRYGILNEQEPTLDHVLSLNIENILDR 104 Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 RL TIVY T ARQF+ H H+ VNGR V+ SY + Sbjct: 105 RLQTIVYEKGLARTPKQARQFIVHGHIAVNGRKVSSPSYLVE 146 >gi|171185874|ref|YP_001794793.1| 30S ribosomal protein S4P [Thermoproteus neutrophilus V24Sta] gi|226695089|sp|B1Y9B8|RS4_THENV RecName: Full=30S ribosomal protein S4P gi|170935086|gb|ACB40347.1| ribosomal protein S4 [Thermoproteus neutrophilus V24Sta] Length = 159 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL TIVYR +I+ ARQ + H H+ V GR V+ + Sbjct: 103 ILERRLQTIVYRMGLAKSIYHARQLIVHGHIAVAGRRVSSPGFLVP 148 >gi|118431573|ref|NP_148135.2| 30S ribosomal protein S4 [Aeropyrum pernix K1] gi|7388201|sp|Q9YB58|RS4_AERPE RecName: Full=30S ribosomal protein S4P gi|116062898|dbj|BAA80740.2| 30S ribosomal protein S4P [Aeropyrum pernix K1] Length = 171 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 25/52 (48%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 N LE RL TIVY+ TI+ ARQ V H H+ + GR V Y Sbjct: 95 GINAEKVLERRLQTIVYKKGLAKTIYQARQLVVHGHIAIAGRRVTSPGYLVS 146 >gi|14591410|ref|NP_143490.1| 30S ribosomal protein S4 [Pyrococcus horikoshii OT3] gi|6647790|sp|O59306|RS4_PYRHO RecName: Full=30S ribosomal protein S4P gi|3258069|dbj|BAA30752.1| 180aa long hypothetical 30S ribosomal protein S4 [Pyrococcus horikoshii OT3] Length = 180 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 LE RL TIVY+ T+ ARQ + H H+ VNG+ + SY Sbjct: 99 DILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLV 144 >gi|145592094|ref|YP_001154096.1| 30S ribosomal protein S4 [Pyrobaculum arsenaticum DSM 13514] gi|152112250|sp|A4WM27|RS4_PYRAR RecName: Full=30S ribosomal protein S4P gi|145283862|gb|ABP51444.1| SSU ribosomal protein S4P [Pyrobaculum arsenaticum DSM 13514] Length = 159 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL TIVYR +I+ ARQ + H H+ + GR V + Sbjct: 103 ILERRLQTIVYRMGLAKSIYHARQLIVHGHIAIEGRRVTSPGFLVP 148 >gi|268324995|emb|CBH38583.1| 30S ribosomal protein S4P [uncultured archaeon] Length = 166 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 29/49 (59%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL T VY+ + +I ARQ + H H+ V+GR V I SY +E + Sbjct: 109 LERRLQTRVYKKELANSIKHARQLIVHGHIAVDGRRVTIPSYIIREDEE 157 >gi|212223249|ref|YP_002306485.1| 30S ribosomal protein S4 [Thermococcus onnurineus NA1] gi|226695090|sp|B6YSQ1|RS4_THEON RecName: Full=30S ribosomal protein S4P gi|212008206|gb|ACJ15588.1| SSU ribosomal protein S4P [Thermococcus onnurineus NA1] Length = 180 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 L+ RL TIV++ TI ARQ + H H+ VNG+ + Y + + + SK Sbjct: 101 LDRRLQTIVFKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLVLKEEE-DTITYSKTSP 159 Query: 152 SVLEA 156 E+ Sbjct: 160 FAKES 164 >gi|119872421|ref|YP_930428.1| 30S ribosomal protein S4P [Pyrobaculum islandicum DSM 4184] gi|152112252|sp|A1RT03|RS4_PYRIL RecName: Full=30S ribosomal protein S4P gi|119673829|gb|ABL88085.1| SSU ribosomal protein S4P [Pyrobaculum islandicum DSM 4184] Length = 159 Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 24/46 (52%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL TIVYR +I+ ARQ V H HV V GR V + Sbjct: 103 ILERRLQTIVYRKGLAKSIYHARQLVVHGHVAVAGRRVTSPGFLVP 148 >gi|18313809|ref|NP_560476.1| 30S ribosomal protein S4P [Pyrobaculum aerophilum str. IM2] gi|26399437|sp|Q8ZTV1|RS4_PYRAE RecName: Full=30S ribosomal protein S4P gi|18161370|gb|AAL64658.1| ribosomal protein S4 [Pyrobaculum aerophilum str. IM2] Length = 159 Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 23/46 (50%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL TIVYR +I ARQ + H HV V GR V + Sbjct: 103 ILERRLQTIVYRMGLAKSIHHARQLIVHGHVAVAGRRVTSPGFLVP 148 >gi|315427190|dbj|BAJ48804.1| small subunit ribosomal protein S4 [Candidatus Caldiarchaeum subterraneum] gi|315428157|dbj|BAJ49742.1| small subunit ribosomal protein S4 [Candidatus Caldiarchaeum subterraneum] Length = 170 Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 26/55 (47%), Positives = 32/55 (58%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 FLE RL TIV+R TIF ARQ + H VLV G+ V SY K G+ E++ Sbjct: 105 DFLERRLQTIVFRTGLARTIFHARQLITHGKVLVGGKKVRAPSYHVKRGEEEEIR 159 >gi|126459584|ref|YP_001055862.1| 30S ribosomal protein S4P [Pyrobaculum calidifontis JCM 11548] gi|152112251|sp|A3MUS9|RS4_PYRCJ RecName: Full=30S ribosomal protein S4P gi|126249305|gb|ABO08396.1| SSU ribosomal protein S4P [Pyrobaculum calidifontis JCM 11548] Length = 159 Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 24/46 (52%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T+V+R +I ARQ V H HVLV GR V + Sbjct: 103 ILERRLQTLVFRMGLAKSIHHARQLVVHGHVLVAGRRVTSPGFLVP 148 >gi|297741847|emb|CBI33207.3| unnamed protein product [Vitis vinifera] Length = 327 Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 22/159 (13%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y +Q + +K+ ++GD+ + + Sbjct: 48 NKKRSIKRKIYP---------RDNLNSYIQSQTTRKLPLFHGDLPITEMHR------GTE 92 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 ++ LE+R D I R F TI ARQ ++HR V VN R V+I + GD+I Sbjct: 93 RNSYILFPLNLETRSDVIPVRLHFCETIPQARQPISHRRVCVNNRMVSITHLKVSHGDII 152 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++ ++ YI ++ + ++ F+ Sbjct: 153 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFL 184 >gi|218884676|ref|YP_002429058.1| 30S ribosomal protein S4P [Desulfurococcus kamchatkensis 1221n] gi|218766292|gb|ACL11691.1| 30S ribosomal protein S4P [Desulfurococcus kamchatkensis 1221n] Length = 147 Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 29/68 (42%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + KE R + + LE RL TIVY+ T+ ARQ + H H+ + GR V Sbjct: 59 LLKEGARLDDVLNLKIEDLLERRLQTIVYKKGLAKTLHEARQLIVHGHIAIGGRRVRSPG 118 Query: 133 YRCKEGDV 140 + Sbjct: 119 RIVTVDEE 126 >gi|310771926|emb|CBH28900.1| 40S RIBOSOMAL PROTEIN S9 [Anncaliia algerae] Length = 186 Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 38/102 (37%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G IS+ +R + ++ FLE RL V+ + ++ A +NH+H+ Sbjct: 81 GIISDVDYRDLDDIRANLEKVLDLTVVDFLERRLQHRVFVSGLAISVHQAXNMINHKHIS 140 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164 VNG V+ Y + V + + R + Sbjct: 141 VNGYVVDRPGYMVSVEEEGHVDIHXFSSLKGEKLGRSKRRKL 182 >gi|20094908|ref|NP_614755.1| 30S ribosomal protein S4 [Methanopyrus kandleri AV19] gi|26399409|sp|Q8TVC0|RS4_METKA RecName: Full=30S ribosomal protein S4P gi|19888144|gb|AAM02685.1| Ribosomal protein related to S4 [Methanopyrus kandleri AV19] Length = 186 Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 66 SEKKFRSIFKEA---DRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVN 117 E FR ++ + T +++ LE RL TIVYR T ARQ V Sbjct: 70 REALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQTIVYRKGLAKTPLQARQLVV 129 Query: 118 HRHVLVNGRSVNIGSYRCK 136 HRH+ + R V + SY Sbjct: 130 HRHIAIGDRIVTVPSYLVS 148 >gi|20271154|gb|AAM18532.1|AF375591_1 ribosomal protein S4 [Helianthus annuus] Length = 331 Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 20/184 (10%) Query: 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLRAKQKMKKY 61 + K R + N+W R + + R + R + Y +QL+ +K+ + Sbjct: 5 RFKTCRLLEGNVWNRELTIIQRRILRRLRNKTRSVKRMIYSRKNLNSYIQLQTTRKLPLF 64 Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 +GD+ + + E+R D I R F T+ ARQ ++HR + Sbjct: 65 HGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPVRLHFSETLPQARQPISHRRL 118 Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181 VN V+I S++ +GD I +K+ +A +E YI ++ ++ + Sbjct: 119 CVNNVIVSITSFQVSQGDFISLKE--------NDAIIYSEIRRSFYIEISVSKIIGKSLD 170 Query: 182 IPSS 185 P Sbjct: 171 SPVR 174 >gi|313126019|ref|YP_004036289.1| SSU ribosomal protein s4p [Halogeometricum borinquense DSM 11551] gi|312292384|gb|ADQ66844.1| SSU ribosomal protein S4P [Halogeometricum borinquense DSM 11551] Length = 175 Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 70 FRSI--FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 R E D ++ LE RL T+ YR T +RQF+ H HV+V+G Sbjct: 79 LRRYGILSEDDNISEVLGLDVTDILERRLQTVAYRKGLGHTPDQSRQFIVHGHVVVDGAR 138 Query: 128 VNIGSYRCKEGDV 140 V S + + Sbjct: 139 VTRPSKMVEVSEE 151 >gi|299739156|ref|XP_001835093.2| nam9 protein [Coprinopsis cinerea okayama7#130] gi|298403647|gb|EAU86735.2| nam9 protein [Coprinopsis cinerea okayama7#130] Length = 390 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 + +E R+D ++R F +++ AR+ V H VL+NGR + R GD++ V Sbjct: 126 GSLMFQEVERRIDVFLFRCCFAHSVYEARRMVIHGDVLLNGRKHTNANTRLAPGDMVTVN 185 Query: 145 QKS 147 + Sbjct: 186 PDA 188 >gi|194033241|ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza sativa Japonica Group] Length = 352 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++L+ +K+ YYGD+ ++ + + E+RLD I+ R F T+ Sbjct: 53 IKLQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRLDVILVRLHFCDTL 106 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V +N V I + GD+I ++ Sbjct: 107 PQARQLISHRRVCLNNGLVTITHLKVSHGDLISFQEN 143 >gi|257053587|ref|YP_003131420.1| 30S ribosomal protein S4P [Halorhabdus utahensis DSM 12940] gi|256692350|gb|ACV12687.1| ribosomal protein S4 [Halorhabdus utahensis DSM 12940] Length = 169 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 26/49 (53%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL T+ YR T ARQF++H HV V+G V+I S + Sbjct: 98 LERRLQTVAYRKGLANTAQQARQFISHGHVTVDGERVSIPSKTVAVEEE 146 >gi|225444268|ref|XP_002280433.1| PREDICTED: similar to ribosomal protein S4 [Vitis vinifera] Length = 362 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 22/159 (13%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y +Q + +K+ ++GD+ + + Sbjct: 48 NKKRSIKRKIYP---------RDNLNSYIQSQTTRKLPLFHGDLPITEMHR------GTE 92 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 ++ LE+R D I R F TI ARQ ++HR V VN R V+I + GD+I Sbjct: 93 RNSYILFPLNLETRSDVIPVRLHFCETIPQARQPISHRRVCVNNRMVSITHLKVSHGDII 152 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180 ++ ++ YI ++ + ++ F+ Sbjct: 153 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFL 184 >gi|164657864|ref|XP_001730058.1| hypothetical protein MGL_3044 [Malassezia globosa CBS 7966] gi|159103952|gb|EDP42844.1| hypothetical protein MGL_3044 [Malassezia globosa CBS 7966] Length = 431 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 11/109 (10%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 + +E R+DT V+R F +++ AR V H V +NG Y + GD++ V+ Sbjct: 116 FMRDVERRIDTAVFRCCFAHSVYYARSLVLHGKVSLNGNVHRDPGYLLQPGDLLSVEPSC 175 Query: 148 KQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196 + + A + V D + P +++ P P Sbjct: 176 VPMLNGHVAKR-----------VQADRERHAVKKSPPEVQESPTPTKEN 213 >gi|57231035|gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0301] Length = 318 Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 19/164 (11%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y + +Q + +K+ ++GD+ + + Sbjct: 26 NKKRSIKRKIY---------SRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP 76 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 E+R D I R F TI ARQ ++HR V VN V+I ++ GD+I Sbjct: 77 ------FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHFKVSHGDLI 130 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 ++ + + L + R YI ++ + ++ F+ P Sbjct: 131 SFQENDARTPNCLG--EEIRRSF--YIEISVEKIIGKFLDHPVR 170 >gi|148643486|ref|YP_001273999.1| 30S ribosomal protein S4P [Methanobrevibacter smithii ATCC 35061] gi|222445015|ref|ZP_03607530.1| hypothetical protein METSMIALI_00631 [Methanobrevibacter smithii DSM 2375] gi|261350415|ref|ZP_05975832.1| ribosomal protein S4 [Methanobrevibacter smithii DSM 2374] gi|172048097|sp|A5UN53|RS4_METS3 RecName: Full=30S ribosomal protein S4P gi|148552503|gb|ABQ87631.1| ribosomal protein S4p [Methanobrevibacter smithii ATCC 35061] gi|222434580|gb|EEE41745.1| hypothetical protein METSMIALI_00631 [Methanobrevibacter smithii DSM 2375] gi|288861198|gb|EFC93496.1| ribosomal protein S4 [Methanobrevibacter smithii DSM 2374] Length = 178 Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L RL TIVY+ T AR FV H H+ +NG+ +N SY +G Sbjct: 99 DILRRRLQTIVYKKGLARTPKEARMFVVHGHITLNGKKINSPSYVVLKGQE 149 >gi|16082066|ref|NP_394492.1| 30S ribosomal protein S4P [Thermoplasma acidophilum DSM 1728] gi|26399492|sp|Q9HJD7|RS4_THEAC RecName: Full=30S ribosomal protein S4P gi|10640347|emb|CAC12161.1| probable 30S ribosomal protein S4 [Thermoplasma acidophilum] Length = 199 Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99 R ++ QL K Y +SE S + + L+ RL TI Sbjct: 61 RLRTNDVNAQKQLERMIKRLNRYKLLSE---------NATLDDVLSLTVENILDRRLQTI 111 Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 V+R ++ ARQ + H H+ V GR V + + D Sbjct: 112 VFRKNLAISVRQARQLITHGHISVAGRRVTVPGMLVEAKDE 152 >gi|288560163|ref|YP_003423649.1| ribosomal protein S4P Rps4p [Methanobrevibacter ruminantium M1] gi|288542873|gb|ADC46757.1| ribosomal protein S4P Rps4p [Methanobrevibacter ruminantium M1] Length = 178 Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV--IEVKQKS 147 L RL TIV++ T AR FV H H+ +NG+ +N SY K G+ + S Sbjct: 99 DILRRRLQTIVFQKGLARTAKEARMFVVHGHIALNGKKINSPSYVVKRGEEEAVGFYHSS 158 Query: 148 KQLASVLEASQLAER 162 + E ++ A + Sbjct: 159 PVAKQIEEYNKAASQ 173 >gi|6978054|gb|AAF34262.1| truncated ribosomal protein small subunit 4 [Pteridium esculentum] gi|7453627|gb|AAF62914.1| truncated small subunit ribosomal protein 4 [Pteridium aquilinum subsp. latiusculum] Length = 67 Score = 48.0 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K+ RR+ + + Q K S F ++L AKQ+++ Sbjct: 1 MSRYRGPRLKLIRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRF 60 Query: 61 YYG 63 YG Sbjct: 61 NYG 63 >gi|71021869|ref|XP_761165.1| hypothetical protein UM05018.1 [Ustilago maydis 521] gi|46100645|gb|EAK85878.1| hypothetical protein UM05018.1 [Ustilago maydis 521] Length = 464 Score = 48.0 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 T+ + +E RLD +V+R+ F + + +R V V +NG + + + GD+ Sbjct: 146 PMPTASLFMRDVERRLDVVVFRSCFARSAYESRSMVVQGKVTLNGVKCSNPNQLLEPGDL 205 Query: 141 IEVKQKSKQLASVLEASQLAER 162 I V+ + + + +LA+R Sbjct: 206 ISVQPSAVPML----SEELAKR 223 >gi|13541394|ref|NP_111082.1| 30S ribosomal protein S4P [Thermoplasma volcanium GSS1] gi|26399451|sp|Q97B95|RS4_THEVO RecName: Full=30S ribosomal protein S4P gi|14324777|dbj|BAB59704.1| ribosomal protein small subunit S9 [Thermoplasma volcanium GSS1] Length = 200 Score = 48.0 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 9/78 (11%) Query: 68 KKFRSIFKEADRSRGDTSHNLI---------SFLESRLDTIVYRAKFVPTIFAARQFVNH 118 K+ + K R + + + + L+ RL TIV++ + ARQ + H Sbjct: 71 KQLERMIKRLSRYKILSDKATLDDVLSLTVENILDRRLQTIVFKKNLALSEKQARQLITH 130 Query: 119 RHVLVNGRSVNIGSYRCK 136 H+ VNGR V + + Sbjct: 131 GHITVNGRRVTVPGMLVE 148 >gi|57231037|gb|AAW47279.1| ribosomal protein S4 [Amborella trichopoda] Length = 321 Score = 48.0 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 21/162 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 K R P K ++L+ +K+ ++GD+ + + Sbjct: 32 KKRSIKRKISP--------RKNLNSYIKLQTTRKLSLFHGDLPITEMHRGTERTSYIP-- 81 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 E+R D I R F T+ ARQ ++HR + VN V+I + GD+I + Sbjct: 82 ----FPLNPETRSDVIPVRLHFRETLPQARQPISHRRLCVNNGMVSITRLKVSHGDLISL 137 Query: 144 KQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 K+ + ++ ER YI ++ + M+ F+ P Sbjct: 138 KENYAR-------TRGEERRRSFYIEISVEKMIGKFLDHPVR 172 >gi|330834007|ref|YP_004408735.1| 30S ribosomal protein S4P [Metallosphaera cuprina Ar-4] gi|329566146|gb|AEB94251.1| 30S ribosomal protein S4P [Metallosphaera cuprina Ar-4] Length = 180 Score = 48.0 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 7/83 (8%) Query: 65 ISEKKFR-SIFKEADRSRGDT------SHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117 + EK+ ++K + + LE RL TIV+R TI+ ARQ + Sbjct: 68 MREKQLLSKLYKIGLLKSEQSSIDDVLGLEEENLLERRLQTIVHRKGLARTIYQARQLIV 127 Query: 118 HRHVLVNGRSVNIGSYRCKEGDV 140 H H+ V GR V Y K + Sbjct: 128 HGHIAVGGRKVTSPGYIVKRDEE 150 >gi|289619595|emb|CBI53878.1| unnamed protein product [Sordaria macrospora] Length = 460 Score = 48.0 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 10/62 (16%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS----------VNIGSYRCKEGDVI 141 LE RLD ++RA F + ARQ V H V VNG+ + Y GD+ Sbjct: 139 LERRLDIAIFRALFASSARQARQMVVHGAVTVNGKKACTHTHYHHDMKHPGYLLNPGDLF 198 Query: 142 EV 143 +V Sbjct: 199 QV 200 >gi|126179744|ref|YP_001047709.1| 30S ribosomal protein S4P [Methanoculleus marisnigri JR1] gi|152112229|sp|A3CWH7|RS4_METMJ RecName: Full=30S ribosomal protein S4P gi|125862538|gb|ABN57727.1| SSU ribosomal protein S4P [Methanoculleus marisnigri JR1] Length = 182 Score = 48.0 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 L+ RL T+V R F + ARQF+ H H+ + GR V I YR + Sbjct: 104 QQLDRRLQTLVLRRGFARSPKQARQFITHGHIAIKGRRVTIPGYRVE 150 >gi|320101540|ref|YP_004177132.1| 30S ribosomal protein S4P [Desulfurococcus mucosus DSM 2162] gi|319753892|gb|ADV65650.1| SSU ribosomal protein S4P [Desulfurococcus mucosus DSM 2162] Length = 170 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + KE + + + LE RL T+VY+ T+ ARQ + H H+ + GR + Sbjct: 82 LLKEGAKLDDVLNLRVEDLLERRLQTLVYKKGLAKTLHEARQLIVHGHIAIGGRRIRSPG 141 Query: 133 YRCKEGDV 140 + Sbjct: 142 RIVSVDEE 149 >gi|39951755|ref|XP_363594.1| hypothetical protein MGG_01520 [Magnaporthe oryzae 70-15] gi|145020635|gb|EDK04764.1| hypothetical protein MGG_01520 [Magnaporthe oryzae 70-15] Length = 445 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 74 FKEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131 + ++ T + +++ +E RLD ++RA F + ARQF H V VNG+ V+ Sbjct: 124 YVTNLKTNRATPYMQMTYAPMERRLDIAIFRALFASSARQARQFCVHGFVKVNGQPVDPD 183 Query: 132 SYRCKEGDV 140 G Sbjct: 184 RVMMATGAK 192 >gi|126952017|gb|ABO28120.1| ribosomal protein S4 [Choisya ternata] Length = 58 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 4/62 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ K RR+G K P G Q R K S + R K K+ Sbjct: 1 MSRYRGPSFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSGKKSQYPNSFRRKTKIAF 56 Query: 61 YY 62 + Sbjct: 57 SF 58 >gi|325958563|ref|YP_004290029.1| 30S ribosomal protein S4 [Methanobacterium sp. AL-21] gi|325329995|gb|ADZ09057.1| ribosomal protein S4 [Methanobacterium sp. AL-21] Length = 178 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLI------SFLESRLDTIVYRAKFVPTIFAARQF 115 + ++ + + + K + D+ I L RL+TIVY+ T AR F Sbjct: 65 HAEVEKAQLLNHIKRLGMLKADSKLEDILDLTVEDVLRRRLETIVYKRGLSNTAKQARLF 124 Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDV 140 + H H+ +NGR +N Y K G+ Sbjct: 125 IVHGHIAMNGRKINAPGYLVKSGEE 149 >gi|85108124|ref|XP_962509.1| hypothetical protein NCU08296 [Neurospora crassa OR74A] gi|28924117|gb|EAA33273.1| predicted protein [Neurospora crassa OR74A] Length = 468 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 27/70 (38%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + LE RLD ++RA F + ARQ V H V VNG+ S R Sbjct: 125 GRKVPTPYEQMTFAPLERRLDIAIFRALFASSARQARQMVVHGAVTVNGKKACTPSQRSN 184 Query: 137 EGDVIEVKQK 146 +K Sbjct: 185 TESHNTMKHP 194 >gi|13449315|ref|NP_085497.1| ribosomal protein S4 [Arabidopsis thaliana] gi|15226130|ref|NP_178806.1| ribosomal protein S4 (RPS4) [Arabidopsis thaliana] gi|1460051|emb|CAA65380.1| small ribosomal protein 4 [Arabidopsis thaliana] gi|6851017|emb|CAA69772.3| ribosomal protein S4 [Arabidopsis thaliana] gi|20197644|gb|AAM15172.1| hypothetical protein [Arabidopsis thaliana] gi|330251018|gb|AEC06112.1| ribosomal protein S4 [Arabidopsis thaliana] Length = 362 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 13/136 (9%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QL+ +K+ ++GD+ + K E+R D I R F+ TI Sbjct: 67 IQLQTTRKLPLFHGDLPITEMHRGTKRTSYIP------FPLNPETRFDVIPLRLHFLETI 120 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 ARQ ++HR V VN V+I ++ GD+I ++ +++ ++ Y Sbjct: 121 PQARQPISHRRVCVNKGMVSITHFKLSHGDII----SFQENNAIIRGEEIRRSF---YKE 173 Query: 170 VNHDNMVATFVRIPSS 185 ++ + ++ + P Sbjct: 174 ISVEKIIGKLLHQPLR 189 >gi|200004029|ref|YP_002221364.1| putative ribosomal protein S4 [Blastocystis sp. DMP/02-328] gi|198385453|gb|ACH86047.1| putative ribosomal protein S4 [Blastocystis sp. DMP/02-328] Length = 922 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 67/176 (38%), Gaps = 16/176 (9%) Query: 13 RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 R NL + K N + + R + YY + K+F Sbjct: 27 RNFKINLTFKNKKWSNFKLLTQQQ---------PIYLCHFRKLNIKRFYYYKFNNKQFLK 77 Query: 73 IFKEADRSRGDTSHNL---ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + +H + +E RLD +Y+AKFVP++FAA ++ + ++ VN + + Sbjct: 78 KYLVNYKEYNFKTHIISLNFKTIERRLDYNLYKAKFVPSLFAAHFYITNGYIFVNQKCIK 137 Query: 130 IGSYRCKEGDVIEVKQKSKQL-ASVLEASQLAERDVPEY---ISVNHDNMVATFVR 181 ++ + D + + K + L + L + + Y + ++ F+ Sbjct: 138 NCNFILQTNDRVTIHSKIYNICKQTLINTFLTKNETLNYIKNLEIDFTTCSFIFLN 193 >gi|124027413|ref|YP_001012733.1| 30S ribosomal protein S4P [Hyperthermus butylicus DSM 5456] gi|152060953|sp|A2BK77|RS4_HYPBU RecName: Full=30S ribosomal protein S4P gi|123978107|gb|ABM80388.1| 30S ribosomal protein S4p [Hyperthermus butylicus DSM 5456] Length = 176 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 27/49 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL TIVY+ TI+ ARQ + H H+ + GR + Y K+ + Sbjct: 101 LERRLQTIVYKKGLARTIYEARQLIVHGHIAIAGRKIRSPGYLVKKDEE 149 >gi|153799850|gb|ABS50656.1| ribosomal protein S4 [Arabidopsis thaliana] gi|153799852|gb|ABS50657.1| ribosomal protein S4 [Arabidopsis thaliana] Length = 314 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 13/136 (9%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QL+ +K+ ++GD+ + K E+R D I R F+ TI Sbjct: 37 IQLQTTRKLPLFHGDLPITEMHRGTKRTSYIP------FPLNPETRFDVIPLRLHFLETI 90 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 ARQ ++HR V VN V+I ++ GD+I ++ +++ ++ Y Sbjct: 91 PQARQPISHRRVCVNKGMVSITHFKLSHGDII----SFQENNAIIRGEEIRRSF---YKE 143 Query: 170 VNHDNMVATFVRIPSS 185 ++ + ++ + P Sbjct: 144 ISVEKIIGKLLHQPLR 159 >gi|126952029|gb|ABO28126.1| ribosomal protein S4 [Citrus aurantium] Length = 59 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P + ++ ++ + KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDFRNQSRSVKKSLISNFV---IEEKQKLRF 57 Query: 61 YY 62 +Y Sbjct: 58 HY 59 >gi|146304894|ref|YP_001192210.1| 30S ribosomal protein S4P [Metallosphaera sedula DSM 5348] gi|172046964|sp|A4YIN4|RS4_METS5 RecName: Full=30S ribosomal protein S4P gi|145703144|gb|ABP96286.1| SSU ribosomal protein S4P [Metallosphaera sedula DSM 5348] Length = 180 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 22/44 (50%) Query: 97 DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 TIV+R TI+ ARQ + H H+ V GR + Y K + Sbjct: 107 QTIVHRKGLARTIYQARQLIVHGHIAVGGRKITSPGYIVKRDEE 150 >gi|169841793|ref|ZP_02874902.1| hypothetical protein cdivTM_31840 [candidate division TM7 single-cell isolate TM7a] Length = 48 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 3/41 (7%) Query: 166 EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 ++ + + + P + P + L+VE+YSR Sbjct: 11 SWMKSDVKGLKFSITGNPKREEAEP---DINEQLIVEYYSR 48 >gi|149192394|ref|ZP_01870595.1| 30S ribosomal protein S4 [Vibrio shilonii AK1] gi|148833785|gb|EDL50821.1| 30S ribosomal protein S4 [Vibrio shilonii AK1] Length = 29 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 3/32 (9%) Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 M TF R+P + +L+VE YS+ Sbjct: 1 MEGTFKRMPERSD---LSADINEHLIVELYSK 29 >gi|55376997|ref|YP_134847.1| 30S ribosomal protein S4P [Haloarcula marismortui ATCC 43049] gi|266976|sp|Q00862|RS4_HALMA RecName: Full=30S ribosomal protein S4P; AltName: Full=HmaS4 gi|148771|gb|AAA73210.1| ribosomal protein HmaS4 [Haloarcula marismortui] gi|55229722|gb|AAV45141.1| 30S ribosomal protein S4P [Haloarcula marismortui ATCC 43049] Length = 171 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 24/45 (53%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T+VYR + T ARQF+ H H++++ V + Sbjct: 99 LERRLQTVVYRKGYANTPEQARQFIVHGHIVLDDARVTRPGMTVE 143 >gi|289065161|ref|YP_003434213.1| ribosomal protein S4 [Chattonella marina] gi|288871873|dbj|BAI70560.1| ribosomal protein S4 [Chattonella marina] Length = 263 Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 7/130 (5%) Query: 17 ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 N + K+ +S R +Y+ L KQ++K +Y ++ K ++ K Sbjct: 43 INCFFHSKNQFLKKSNLYDSFKNNRF--KNYYRQNLILKQQLKNFY-NLQNYKVKNFVKR 99 Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + N I+ E RLD +YR KF+ T+ RQ++N+ ++L+N + + SY+ K Sbjct: 100 ELLEKD----NFINCFEKRLDVFLYRTKFLKTLLQIRQWINYNNILINRKKQSYISYQLK 155 Query: 137 EGDVIEVKQK 146 GD++E K + Sbjct: 156 SGDLLEFKDQ 165 >gi|294337074|emb|CAQ52687.1| ribosomal protein S4 [Aulacomnium androgynum] Length = 46 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTTKTPQLKSS 31 >gi|269986618|gb|EEZ92900.1| ribosomal protein S4 [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 176 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 R + NL +F++ RL T V + +I +RQ + HRH+ V+G+ ++ Sbjct: 81 RGLVSSTATVDDVLELNLENFMDRRLQTFVLKKGMARSIRESRQVITHRHIAVDGKIIDS 140 Query: 131 GSYRCKEGDV 140 SY K+ + Sbjct: 141 PSYMVKKEEE 150 >gi|224020959|ref|YP_002608192.1| ribosomal protein S4 [Carica papaya] gi|170522371|gb|ACB20481.1| ribosomal protein S4 [Carica papaya] Length = 352 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 22/164 (13%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y K +Q + +K+ ++GD+ + + Sbjct: 38 NKKRSIKRKIYP---------RKNLNSYIQSQTTRKLSLFHGDLPITEMHRGTERTSYIP 88 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 E+RLD I R F T+ ARQ ++HR V VN V+I + GD+I Sbjct: 89 ------FPLNPETRLDVIPVRLHFRETLPQARQPISHRRVCVNNGMVSITRLKLSHGDII 142 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 ++ ++ YI ++ + ++ F P Sbjct: 143 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFRNHPVR 179 >gi|57231033|gb|AAW47277.1| ribosomal protein S4 [Eschscholzia californica] Length = 319 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 13/144 (9%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 + +Q + +K+ ++GD+ + R+ + E+R D I Sbjct: 42 PRENLNSYIQSQTTRKLPLFHGDLPITEMHR------RTERTSYIPFPLNPETRSDVIPV 95 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R F TI ARQ ++HR V VN V+I ++ GD+I ++ + Sbjct: 96 RLHFRETIPQARQPISHRRVCVNNGMVSITHWKVCYGDLISFQENDARTRGEEIRRSF-- 153 Query: 162 RDVPEYISVNHDNMVATFVRIPSS 185 YI ++ + ++ F+ P Sbjct: 154 -----YIDISVEKIIGKFLAHPVR 172 >gi|57231019|gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus] Length = 319 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 22/164 (13%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y + ++L+ +K+ ++GD+ + + Sbjct: 31 NKKRSIKRKIYP---------RENLNSYIKLQTTRKLPLFHGDLPITEMHRGTERTSYIP 81 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 E+R D I R F TI ARQ ++HR V VN V+I + GD+I Sbjct: 82 ------FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLI 135 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 K+ + YI ++ + ++ F+ P Sbjct: 136 SFKENDARTCGEEIRRSF-------YIDISVEKIIGKFLDHPVR 172 >gi|200004057|ref|YP_002221391.1| putative ribosomal protein S4 [Blastocystis sp. NandII] gi|198385479|gb|ACH86072.1| putative ribosomal protein S4 [Blastocystis sp. NandII] Length = 1017 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 6/148 (4%) Query: 37 HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE-ADRSRGDTSHNLISFLESR 95 +G + SK Y + K + Y I+++ R D E R Sbjct: 33 NGLKNNSKGKYIYHYKKLKIENLYNYKFINKQILRKYLAIYNDNEFKLILKRNYLNFEKR 92 Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 LD +Y A FV +I+AA+ F+ V VN + + +Y K+ D++E+ ++ Sbjct: 93 LDFNLYHANFVNSIYAAKFFITKGCVFVNKKKITSFNYILKKNDIVEINSIFYNY--IIN 150 Query: 156 ASQLAERDVPEY---ISVNHDNMVATFV 180 + + Y + +++ F+ Sbjct: 151 NISFNDFNKKNYIRNLEIDYKTFSFIFL 178 >gi|303228097|emb|CAR65268.1| ribosomal protein S4 protein [Caduciella guangdongensis] Length = 46 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + KI RR+G K+P Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKTP 26 >gi|312137107|ref|YP_004004444.1| ssu ribosomal protein s4p [Methanothermus fervidus DSM 2088] gi|311224826|gb|ADP77682.1| SSU ribosomal protein S4P [Methanothermus fervidus DSM 2088] Length = 173 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 30/171 (17%) Query: 21 GRPKSPVNTRSYGP----GLHGQRRKSKPSYFGLQLRA------------KQKMKKYYGD 64 G PK P P + K +GL+ + +++ +K +G Sbjct: 2 GHPKKPRKKYDTPPHPWDAQRIKEEKKLVKKYGLKNKKEIWKAETMVRRYRREARKLFGM 61 Query: 65 ISEK-------KFRSIFKEADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAA 112 E + ++K + +++ L RL T+VY TI A Sbjct: 62 PEEHAKVESKQLMKHLWKLGLLDKDAELRDILDLTVEDVLRRRLQTMVYEKGLARTIKQA 121 Query: 113 RQFVNHRHVLVNGRSVNIGSYRC--KEGDVIEVKQKSKQLASVLEASQLAE 161 RQ + H H+ ++G V + +E D I+ S + + AE Sbjct: 122 RQMIVHGHIAIDGTRVRSPGHIVKREEEDKIDFYPHSPMKEIIKSEKEKAE 172 >gi|3025872|gb|AAC26507.1| ribosomal protein S4 [Brassica napus] Length = 362 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 13/136 (9%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 +QL+ +K+ ++GD+ + K E+R D I R F+ TI Sbjct: 67 IQLQTTRKLPLFHGDLPITEMHRGTKRTSYIP------FPLNPETRFDVIPLRLHFLETI 120 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 ARQ ++HR V VN V+I + GD+I ++ +++ ++ Y Sbjct: 121 PQARQPISHRRVCVNKGMVSITHLKLSHGDII----SFQENNAIIRGEEIRRSF---YKE 173 Query: 170 VNHDNMVATFVRIPSS 185 ++ + ++ + P Sbjct: 174 ISVEKIIGKLLHQPLR 189 >gi|294337184|emb|CAQ52742.1| ribosomal protein S4 [Isodrepanium lentulum] gi|303228179|emb|CAR65309.1| ribosomal protein S4 protein [Porotrichum madagassum] Length = 46 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + KI RR+G K+P S Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSS 31 >gi|126952120|gb|ABO28170.1| ribosomal protein S4 [Microcitrus australis] gi|126952124|gb|ABO28172.1| ribosomal protein S4 [Microcitrus inodora] Length = 59 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 20/60 (33%), Gaps = 4/60 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K S R K K+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQISNSFRRKTKIAF 56 >gi|126952162|gb|ABO28191.1| ribosomal protein S4 [Toona ciliata] Length = 59 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 5/62 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMK 59 MS+ + K RR+G K P G L Q R K S R KQK++ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQISYSFRKEKQKLR 56 Query: 60 KY 61 + Sbjct: 57 FH 58 >gi|323149057|ref|YP_004222821.1| ribosomal protein S4 [Vigna radiata] gi|308206763|gb|ADO19900.1| ribosomal protein S4 [Vigna radiata] Length = 346 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 27/176 (15%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 ++ RR+ R K R P K +Q + +K+ ++ D+ + Sbjct: 24 RVLRRL------RNKKRSLKRKISP--------RKNMNSYIQSQTTRKLPLFHADLPITE 69 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + LI E+R D I R F T+ ARQ ++HR V VN R V+ Sbjct: 70 MHRGTERTSYIP------LILNPETRSDVIPVRLHFRETLPQARQPISHRRVCVNNRIVS 123 Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 I + GD+I ++ ++ YI ++ D ++ F+ P Sbjct: 124 ITRLKVSHGDLISFQENDARIRGEEIRRSF-------YIEISVDKIIGKFLDHPVR 172 >gi|238617510|gb|ACR46887.1| ribosomal protein S4 [Centaurea toletana] Length = 32 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|301154078|emb|CAR31437.1| ribosomal protein S4 protein [Thamnobryum cataractarum] Length = 43 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSS 31 >gi|189342340|gb|ACD91749.1| ribosomal protein S4 [Cousinia gigantolepis] Length = 45 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 12/30 (40%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTR 30 MS+ + K RR+G K P R Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPREGR 30 >gi|257388630|ref|YP_003178403.1| 30S ribosomal protein S4P [Halomicrobium mukohataei DSM 12286] gi|257170937|gb|ACV48696.1| ribosomal protein S4 [Halomicrobium mukohataei DSM 12286] Length = 173 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 LE RL T+VYR + T ARQF++H H+++ V Sbjct: 101 LERRLQTVVYRKGYANTPEQARQFISHGHIVLGDARVTRPGM 142 >gi|255590109|ref|XP_002535173.1| Mitochondrial ribosomal protein S4, putative [Ricinus communis] gi|223523829|gb|EEF27209.1| Mitochondrial ribosomal protein S4, putative [Ricinus communis] Length = 276 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 7/98 (7%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 + E+R D I R F TI ARQ ++HR V VN V+I + GD+I K Sbjct: 13 FLLNPETRSDVIPVRLHFCETIPQARQPISHRRVCVNNGMVSITHLKVSHGDIISFKAND 72 Query: 148 KQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 ++ + E YI ++ + ++ F+ P Sbjct: 73 ARI-------RGEEIRRFFYIEISVEKIIGKFLDHPVR 103 >gi|162605936|ref|XP_001713483.1| 40S ribosomal protein S9 [Guillardia theta] gi|13794408|gb|AAK39785.1|AF083031_149 40S ribosomal protein S9 [Guillardia theta] Length = 181 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 3/113 (2%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGD 83 N R + + L L+ +K + K+ ++ Sbjct: 37 KNKREVWRVQLALSKIRSSARLLLTLQENDPRRKIQANALIKRLKNYGILSDNNTNLESV 96 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 S + FLE RL T+V++ +I AR V H+H+ VN + V+I S K Sbjct: 97 LSLKIQDFLERRLQTLVFKNGLARSIHHARILVRHKHISVNDQLVDIPSVMVK 149 >gi|15678065|ref|NP_275179.1| 30S ribosomal protein S4P [Methanothermobacter thermautotrophicus str. Delta H] gi|6647786|sp|O26142|RS4_METTH RecName: Full=30S ribosomal protein S4P gi|2621071|gb|AAB84543.1| ribosomal protein S9 (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 171 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%) Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 E + + L RL T+V++ T+ ARQ V H H+ ++GR ++ Y Sbjct: 85 EGAKLEDVLDLTVEDVLRRRLQTLVHKRGLARTVKEARQMVIHGHIALDGRKIDAPGYIV 144 Query: 136 KEGDV 140 K G+ Sbjct: 145 KRGEE 149 >gi|304314285|ref|YP_003849432.1| 30S ribosomal protein S4p [Methanothermobacter marburgensis str. Marburg] gi|302587744|gb|ADL58119.1| 30S ribosomal protein S4p [Methanothermobacter marburgensis str. Marburg] Length = 171 Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L RL T+V++ T+ ARQ V H H+ ++GR ++ Y K G+ Sbjct: 101 LRRRLQTLVHKRGLARTVNEARQMVVHGHIALDGRKIDAPGYIVKRGEE 149 >gi|296124609|gb|ADG95965.1| ribosomal protein S4 [Lilium bosniacum] Length = 44 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 10/24 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK 24 MS+ + K RR+G K Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSK 24 >gi|303228181|emb|CAR65310.1| ribosomal protein S4 protein [Shevockia inunctocarpa] Length = 45 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P + Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSN 31 >gi|238617452|gb|ACR46858.1| ribosomal protein S4 [Centaurea aetolica] Length = 32 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|296124607|gb|ADG95964.1| ribosomal protein S4 [Lilium cattaniae] Length = 45 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP 26 >gi|261884951|ref|ZP_06008990.1| 30S ribosomal protein S4 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 51 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 1 MSKRESSKHKIDRRIGENLW------GRPKSPVNTRSYGPGLHGQRR 41 M++ +D +G +L KS ++TR Y PG GQR+ Sbjct: 1 MARYRGPVVMLDIPLGVSLAIKCETILAGKSALDTRPYAPGQRGQRK 47 >gi|258573477|ref|XP_002540920.1| 40S ribosomal protein S9 [Uncinocarpus reesii 1704] gi|237901186|gb|EEP75587.1| 40S ribosomal protein S9 [Uncinocarpus reesii 1704] Length = 188 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VYR +I AR + RH+ V + VN+ S+ + Sbjct: 99 DFLERRLQTCVYRLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFIVR 145 >gi|303228147|emb|CAR65293.1| ribosomal protein S4 protein [Neckera neckeroides] Length = 46 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + +I RR+G K+P Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTP 26 >gi|57231031|gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis] Length = 320 Score = 45.3 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 22/163 (13%) Query: 23 PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82 K + + Y + +Q + +K+ ++GD+ + + Sbjct: 32 KKRSIKRKIYP---------RENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP- 81 Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 E+R D I R F TI ARQ ++HR V VN V+I + GD+I Sbjct: 82 -----FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLIS 136 Query: 143 VKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185 ++ + YI ++ + ++ F+ P Sbjct: 137 FQENDARTRGEEIRRSF-------YIDISVEKIIGKFLDHPVR 172 >gi|260576849|ref|ZP_05844832.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2] gi|259020886|gb|EEW24199.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2] Length = 100 Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 8/92 (8%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 N + RLD +++A+F T A V+ H+ +NG V + GDV+ Sbjct: 5 NPAALPRQRLDLWLWQARFFKTRALAAAVVSSGHLRLNGAKVGKPGHGVTPGDVLGF--V 62 Query: 147 SKQLASVLEASQLAERDVPE------YISVNH 172 ++ LA+R P Y+ ++ Sbjct: 63 QADRLRLVRVLGLAQRRGPSIEAQTLYLDLDA 94 >gi|145932464|ref|YP_001165376.1| ribosomal protein S4 [Phytophthora ramorum] gi|110169662|gb|ABG54127.1| ribosomal protein S4 [Phytophthora ramorum] gi|188038025|gb|ACD46643.1| ribosomal protein S4 [Phytophthora ramorum] Length = 153 Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 9/118 (7%) Query: 7 SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY-------FGLQLRAKQKMK 59 ++KI + N+ + R K F +L KQ+ + Sbjct: 6 PRNKICFQNNRNIHKNLNLLKLKAKKWNLFKKKLRYRKEIKPEKRKKFFQKRLFEKQQFR 65 Query: 60 KYYGDISEKKFRSIFKEADRS--RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115 +YG I E + +++FK+ + + + N + LESRLD + R K V TIF A+Q Sbjct: 66 NFYGCIHEYQLKNLFKKLSKKDNKINIFKNFVVLLESRLDINLVRLKLVKTIFQAKQL 123 >gi|303228129|emb|CAR65284.1| ribosomal protein S4 protein [Neckera crenulata] Length = 46 Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSS 31 >gi|303228115|emb|CAR65277.1| ribosomal protein S4 protein [Homaliodendron flabellatum] gi|303228117|emb|CAR65278.1| ribosomal protein S4 protein [Homaliodendron flabellatum] gi|303228119|emb|CAR65279.1| ribosomal protein S4 protein [Homaliodendron scalpellifolium] Length = 46 Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + +I RR+G K+P Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTP 26 >gi|189342402|gb|ACD91780.1| ribosomal protein S4 [Cousinia albertoregelia] Length = 45 Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|68144086|gb|AAY86080.1| small ribosomal protein 4 [Lagarostrobos franklinii] gi|68144088|gb|AAY86081.1| small ribosomal protein 4 [Lagarostrobos franklinii] Length = 57 Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + VP ++++ +I + + + + LV+E++SR Sbjct: 13 KHKVPFHLTLYSSQYKGVVNQIIDN---ISIGLDINELLVIEYFSR 55 >gi|126952106|gb|ABO28163.1| ribosomal protein S4 [Glycosmis mauritiana] Length = 59 Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 19/60 (31%), Gaps = 4/60 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 MS+ + K RR+G K P G Q R K R K K+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSRKKISISNSFRRKTKIAF 56 >gi|238617454|gb|ACR46859.1| ribosomal protein S4 [Centaurea argecillensis] gi|238617456|gb|ACR46860.1| ribosomal protein S4 [Centaurea argecillensis] gi|238617458|gb|ACR46861.1| ribosomal protein S4 [Centaurea argecillensis] gi|238617460|gb|ACR46862.1| ribosomal protein S4 [Centaurea argecillensis] gi|238617462|gb|ACR46863.1| ribosomal protein S4 [Centaurea argecillensis] gi|238617464|gb|ACR46864.1| ribosomal protein S4 [Centaurea argecillensis] gi|238617466|gb|ACR46865.1| ribosomal protein S4 [Centaurea argecillensis] gi|238617468|gb|ACR46866.1| ribosomal protein S4 [Centaurea cephalariifolia] gi|238617470|gb|ACR46867.1| ribosomal protein S4 [Centaurea cephalariifolia] gi|238617474|gb|ACR46869.1| ribosomal protein S4 [Centaurea josiae] gi|238617476|gb|ACR46870.1| ribosomal protein S4 [Centaurea josiae] gi|238617478|gb|ACR46871.1| ribosomal protein S4 [Centaurea kandavanensis] gi|238617480|gb|ACR46872.1| ribosomal protein S4 [Centaurea litardierei] gi|238617482|gb|ACR46873.1| ribosomal protein S4 [Centaurea litardierei] gi|238617484|gb|ACR46874.1| ribosomal protein S4 [Centaurea nana] gi|238617486|gb|ACR46875.1| ribosomal protein S4 [Centaurea nana] gi|238617488|gb|ACR46876.1| ribosomal protein S4 [Centaurea ornata] gi|238617490|gb|ACR46877.1| ribosomal protein S4 [Centaurea ornata] gi|238617492|gb|ACR46878.1| ribosomal protein S4 [Centaurea podospermifolia] gi|238617494|gb|ACR46879.1| ribosomal protein S4 [Centaurea podospermifolia] gi|238617496|gb|ACR46880.1| ribosomal protein S4 [Centaurea raphanina] gi|238617498|gb|ACR46881.1| ribosomal protein S4 [Centaurea toletana] gi|238617500|gb|ACR46882.1| ribosomal protein S4 [Centaurea toletana] gi|238617502|gb|ACR46883.1| ribosomal protein S4 [Centaurea toletana] gi|238617504|gb|ACR46884.1| ribosomal protein S4 [Centaurea toletana] gi|238617506|gb|ACR46885.1| ribosomal protein S4 [Centaurea toletana] gi|238617508|gb|ACR46886.1| ribosomal protein S4 [Centaurea toletana] gi|238617512|gb|ACR46888.1| ribosomal protein S4 [Centaurea toletana] gi|238617514|gb|ACR46889.1| ribosomal protein S4 [Centaurea toletana] Length = 32 Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|294337170|emb|CAQ52735.1| ribosomal protein S4 [Homalothecium sericeum] gi|303228191|emb|CAR65315.1| ribosomal protein S4 protein [Thamnobryum pandum] Length = 46 Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT 29 MS+ + +I RR+G K+P Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLK 29 >gi|2500406|sp|Q25555|RS9_NAEFO RecName: Full=40S ribosomal protein S9 gi|1353747|gb|AAB01779.1| 40s ribosomal protein S9 homolog [Naegleria fowleri] Length = 186 Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 K ++ G +G + K + L +K ++ + E + F+ A R Sbjct: 23 KERMDRELKMCGKYGLKNKQEIWRLQYYLARARKTARHLLTLPEDDMKRQFEGAALLRRM 82 Query: 84 TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 T L+ LE RL T+V + +I ARQ + RH+ V ++ Sbjct: 83 TRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQRHIRVGKQT 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + Sbjct: 143 VNVPSFIVRVDSEKHINMSPFS 164 >gi|291334095|gb|ADD93767.1| putative S4 domain protein [uncultured marine bacterium MedDCM-OCT-S05-C222] Length = 222 Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 L RL VY ++ ARQFV H +++ + V I SY Sbjct: 102 DILNRRLQAQVYYKGLAISMKQARQFVTHGKIVIGNQKVTIPSY 145 >gi|294337072|emb|CAQ52686.1| ribosomal protein S4 [Anomodon viticulosus] gi|294337076|emb|CAQ52688.1| ribosomal protein S4 [Baldwiniella kealeensis] gi|294337078|emb|CAQ52689.1| ribosomal protein S4 [Bissetia lingulata] gi|294337080|emb|CAQ52690.1| ribosomal protein S4 [Boulaya mittenii] gi|294337092|emb|CAQ52696.1| ribosomal protein S4 [Camptochaete arbuscula var. tumida] gi|294337102|emb|CAQ52701.1| ribosomal protein S4 [Dendroalsia abietina] gi|294337108|emb|CAQ52704.1| ribosomal protein S4 [Dixonia thamnioides] gi|294337110|emb|CAQ52705.1| ribosomal protein S4 [Dolichomitriopsis diversiformis] gi|294337134|emb|CAQ52717.1| ribosomal protein S4 [Haplohymenium triste] gi|294337146|emb|CAQ52723.1| ribosomal protein S4 [Hildebrandtiella guyanensis] gi|294337156|emb|CAQ52728.1| ribosomal protein S4 [Homalia trichomanoides] gi|294337162|emb|CAQ52731.1| ribosomal protein S4 [Homaliadelphus targionianus] gi|294337186|emb|CAQ52743.1| ribosomal protein S4 [Isothecium myosuroides] gi|294337190|emb|CAQ52745.1| ribosomal protein S4 [Lembophyllum divulsum] gi|294337196|emb|CAQ52748.1| ribosomal protein S4 [Leucodon sciuroides] gi|294337198|emb|CAQ52749.1| ribosomal protein S4 [Limbella tricostata] gi|294337200|emb|CAQ52750.1| ribosomal protein S4 [Lindbergia brachyptera] gi|294337206|emb|CAQ52752.1| ribosomal protein S4 [Meteorium polytrichum] gi|294337250|emb|CAQ52774.1| ribosomal protein S4 [Prionodon densus] gi|294337261|emb|CAQ52779.1| ribosomal protein S4 [Rigodium pseudothuidium] gi|294337269|emb|CAQ52783.1| ribosomal protein S4 [Taiwanobryum speciosum] gi|294337273|emb|CAQ52785.1| ribosomal protein S4 [Thamnobryum alopecurum] gi|294337281|emb|CAQ52789.1| ribosomal protein S4 [Toloxis imponderosa] gi|294337285|emb|CAQ52791.1| ribosomal protein S4 [Tripterocladium leucocladulum] gi|294337287|emb|CAQ52792.1| ribosomal protein S4 [Weymouthia cochlearifolia] gi|294337289|emb|CAQ52793.1| ribosomal protein S4 [Weymouthia mollis] gi|301154076|emb|CAR31436.1| ribosomal protein S4 protein [Porotrichopsis flacca] gi|301154080|emb|CAR31438.1| ribosomal protein S4 protein [Thamnobryum fernandesii] gi|301154082|emb|CAR31439.1| ribosomal protein S4 protein [Thamnobryum neckeroides] gi|301154084|emb|CAR31440.1| ribosomal protein S4 protein [Thamnobryum rudolphianum] gi|301154086|emb|CAR31441.1| ribosomal protein S4 protein [Thamnobryum speciosum] gi|301154088|emb|CAR31442.1| ribosomal protein S4 protein [Thamnobryum angustifolium] gi|301154090|emb|CAR31443.1| ribosomal protein S4 protein [Thamnobryum alopecurum f. protensum] gi|303228099|emb|CAR65269.1| ribosomal protein S4 protein [Caduciella mariei] gi|303228101|emb|CAR65270.1| ribosomal protein S4 protein [Chileobryon callicostelloides] gi|303228105|emb|CAR65272.1| ribosomal protein S4 protein [Curvicladium kurzii] gi|303228107|emb|CAR65273.1| ribosomal protein S4 protein [Echinodium hispidum] gi|303228111|emb|CAR65275.1| ribosomal protein S4 protein [Himantocladium cyclophyllum] gi|303228113|emb|CAR65276.1| ribosomal protein S4 protein [Himantocladium implanum] gi|303228137|emb|CAR65288.1| ribosomal protein S4 protein [Neckera himalayana] gi|303228149|emb|CAR65294.1| ribosomal protein S4 protein [Neckera polyclada] gi|303228157|emb|CAR65298.1| ribosomal protein S4 protein [Himantocladium warburgii] gi|303228161|emb|CAR65300.1| ribosomal protein S4 protein [Neckeropsis disticha] gi|303228163|emb|CAR65301.1| ribosomal protein S4 protein [Neckeropsis fimbriata] gi|303228165|emb|CAR65302.1| ribosomal protein S4 protein [Neckeropsis gracilenta] gi|303228167|emb|CAR65303.1| ribosomal protein S4 protein [Neckeropsis undulata] gi|303228173|emb|CAR65306.1| ribosomal protein S4 protein [Pinnatella foreauana] gi|303228183|emb|CAR65311.1| ribosomal protein S4 protein [Thamnobryum alopecurum] gi|303228185|emb|CAR65312.1| ribosomal protein S4 protein [Thamnobryum ellipticum] gi|303228187|emb|CAR65313.1| ribosomal protein S4 protein [Thamnobryum fasciculatum] gi|303228189|emb|CAR65314.1| ribosomal protein S4 protein [Thamnobryum negrosense] gi|303228195|emb|CAR65317.1| ribosomal protein S4 protein [Touwia laticostata] Length = 46 Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSS 31 >gi|294337104|emb|CAQ52702.1| ribosomal protein S4 [Dichelodontium nitidum] Length = 46 Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + KI RR+G K P S Sbjct: 1 MSRYRGPRVKIIRRLGTLPGLTNKIPQLKSS 31 >gi|302674230|ref|XP_003026800.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8] gi|300100484|gb|EFI91897.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8] Length = 335 Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 34/65 (52%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 + + +E R+D +++R+ P+++ AR+ V H V +NG+ + R GD++ V Sbjct: 127 MFADVERRIDVLIFRSCLAPSVYEARRLVVHGKVKLNGKQHQNANTRLAPGDMVTVDPAH 186 Query: 148 KQLAS 152 + Sbjct: 187 IKFLR 191 >gi|294337180|emb|CAQ52740.1| ribosomal protein S4 [Hypnodendron vitiense] Length = 46 Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGALPGLTNKTPQLKSS 31 >gi|296284815|ref|ZP_06862813.1| S4 domain-containing protein [Citromicrobium bathyomarinum JL354] Length = 100 Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD + R +FV AAR+ V H+ VNG V S GDV+ + + S V Sbjct: 1 MRLDLALCRLRFVRARSAARRLVESGHLRVNGTRVERVSREITVGDVLTIPRTSG--VLV 58 Query: 154 LEASQLAERDVPE 166 + L ER P Sbjct: 59 IRIEALPERRGPP 71 >gi|284165824|ref|YP_003404103.1| ribosomal protein S4 [Haloterrigena turkmenica DSM 5511] gi|284015479|gb|ADB61430.1| ribosomal protein S4 [Haloterrigena turkmenica DSM 5511] Length = 173 Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL T+VYR T ARQ++ H H+++ + + SY + Sbjct: 100 DILERRLQTVVYRNGLANTTQQARQYIIHGHIVIGDQRHRVPSYVVDVDEE 150 >gi|189342310|gb|ACD91734.1| ribosomal protein S4 [Cousinia linczewskii] Length = 45 Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K RR+G K P S G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----SAGSDLRNQSRSGKKSQYR 45 >gi|303228193|emb|CAR65316.1| ribosomal protein S4 protein [Thamnobryum pumilum] Length = 46 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSS 31 >gi|189342222|gb|ACD91690.1| ribosomal protein S4 [Cousinia gaubae] Length = 44 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|296124604|gb|ADG95963.1| ribosomal protein S4 [Lilium jankae] Length = 44 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 10/24 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPK 24 MS+ + K RR+G K Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSK 24 >gi|294337174|emb|CAQ52737.1| ribosomal protein S4 [Hookeria lucens] Length = 46 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + KI RR+G K P S Sbjct: 1 MSRYRGPRVKIIRRLGVLPGLTNKIPQLKSS 31 >gi|307109577|gb|EFN57815.1| hypothetical protein CHLNCDRAFT_56085 [Chlorella variabilis] Length = 192 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 8/84 (9%) Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E + ++ + LE RL T+V++ +I AR + R Sbjct: 83 YRYGFLDESQ--------NKLDYVLALTPADVLERRLQTLVFKLGLAKSIHHARVLIRQR 134 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143 H+ V + VNI S+ + + Sbjct: 135 HIRVGKQIVNIPSFMVRVDSQKHI 158 >gi|289580105|ref|YP_003478571.1| ribosomal protein S4 [Natrialba magadii ATCC 43099] gi|289529658|gb|ADD04009.1| ribosomal protein S4 [Natrialba magadii ATCC 43099] Length = 173 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 LE RL T+ YR T ARQF+ H HV+V + + SY + Sbjct: 102 LERRLQTVAYRKGLANTPQQARQFIIHGHVVVGDQRHRVPSYVVDVDEE 150 >gi|126952156|gb|ABO28188.1| ribosomal protein S4 [Skimmia anquetilia] Length = 59 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58 MS+ + K RR+G K P G Q R K R K K+ Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSNFRNQSRSGKKISISNSFRRKTKI 54 >gi|296124598|gb|ADG95960.1| ribosomal protein S4 [Lilium bosniacum] Length = 45 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 11/27 (40%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPV 27 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPK 27 >gi|329350650|gb|AEB91334.1| ribosomal protein S4 [Cousinia pentacanthoides] Length = 44 Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|126952053|gb|ABO28138.1| ribosomal protein S4 [Citrus latipes] Length = 59 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP 26 >gi|11466324|ref|NP_051152.1| ribosomal protein S4 [Cafeteria roenbergensis] gi|6180106|gb|AAF05803.1|AF193903_26 ribosomal protein S4 [Cafeteria roenbergensis] Length = 1641 Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%) Query: 40 RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA-DRSRGDTSHNLISFLESRLDT 98 R + + + ++L K+ +Y + + K R+ FK ++SR N E+RLD Sbjct: 82 RFYLQKNLYKVELYRKKGFLSFYRKLDDSKIRNWFKHQYNKSRQFKIINFFKMFETRLDV 141 Query: 99 IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 I +R K PTIF A F+ R + +N SYR + GD+I Sbjct: 142 ISFRMKLTPTIFLANMFIKTRGLQINYGLKKEPSYRLQIGDLISF 186 >gi|328766555|gb|EGF76609.1| hypothetical protein BATDEDRAFT_33834 [Batrachochytrium dendrobatidis JAM81] Length = 188 Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%) Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +E + + LE RL T V++ +I AR + RH+ V + V+I S+ Sbjct: 86 EEKAKLDYVLGLRVEDLLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVDIPSFI 145 Query: 135 CK 136 + Sbjct: 146 VR 147 >gi|189342368|gb|ACD91763.1| ribosomal protein S4 [Cousinia alepideae] Length = 44 Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|6440857|dbj|BAA78592.1| 40S ribosomal protein S9 [Chlamydomonas sp. HS-5] Length = 192 Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 8/91 (8%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 +A + YG ++E + D+ + FLE RL T+V++ +I A Sbjct: 76 QALMRRMYKYGLLNETQ--------DKLDYVLALQPNDFLERRLQTVVFKQGLAKSIHHA 127 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 R + H+ V + VNI S+ + V Sbjct: 128 RVLIKQNHIRVGKQVVNIPSFMVRVDSQKHV 158 >gi|290559362|gb|EFD92695.1| ribosomal protein S4 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 177 Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 31/54 (57%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 N+ + L+ RL T V + +I ARQ + HRH+ V+G+ ++ SY K+ + Sbjct: 97 NIENLLDRRLQTFVLNKEMARSIREARQIITHRHITVDGKLIDSPSYMVKKDEE 150 >gi|189342422|gb|ACD91790.1| ribosomal protein S4 [Cousinia lachnosphaera] Length = 43 Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|156084614|ref|XP_001609790.1| 40S ribosomal subunit protein S9 [Babesia bovis T2Bo] gi|154797042|gb|EDO06222.1| 40S ribosomal subunit protein S9, putative [Babesia bovis] Length = 182 Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 3/120 (2%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA---DRSRGD 83 N R + + + + L L K +++ GD ++ + Sbjct: 37 KNKREVWRVQYVLSKIRSAARYLLTLDDKDVKRQFQGDALLRRMVRYGLMGENERKLDFV 96 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 L +E RL T V++ +I AR + RH+ V + V+I S+ + + Sbjct: 97 LGLTLNKMMERRLQTKVFKLGLAKSIHHARCMIRQRHIRVGKQIVDIPSFMVRVDSEKHI 156 >gi|303228171|emb|CAR65305.1| ribosomal protein S4 protein [Pinnatella anacamptolepis] Length = 46 Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 12/26 (46%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + +I RR+G K+ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTS 26 >gi|292656900|ref|YP_003536797.1| 30S ribosomal protein S4 [Haloferax volcanii DS2] gi|291372709|gb|ADE04936.1| ribosomal protein S4 [Haloferax volcanii DS2] Length = 175 Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + LE R T+ YR T ARQF+ H HV V+G + S + + + Sbjct: 99 VTDILERRFQTVAYRKGLAQTPQQARQFIVHGHVTVDGARTTVPSRKVEVDEE 151 >gi|227496317|ref|ZP_03926613.1| hemolysin A [Actinomyces urogenitalis DSM 15434] gi|226834155|gb|EEH66538.1| hemolysin A [Actinomyces urogenitalis DSM 15434] Length = 287 Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 R+D+ + R + A Q V HV ++G V + + IEV Sbjct: 5 IRIDSELVRRGLARSRTHAAQLVTDGHVTLDGAVVTKPARQVNPAQAIEV 54 >gi|71000429|ref|XP_754909.1| 40S ribosomal protein S9 [Aspergillus fumigatus Af293] gi|66852546|gb|EAL92871.1| 40S ribosomal protein S9 [Aspergillus fumigatus Af293] gi|159127923|gb|EDP53038.1| 40S ribosomal protein S9 [Aspergillus fumigatus A1163] Length = 237 Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ SY + Sbjct: 147 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 193 >gi|296124596|gb|ADG95959.1| ribosomal protein S4 [Lilium pyrenaicum var. albanicum] gi|296124600|gb|ADG95961.1| ribosomal protein S4 [Lilium candidum] gi|296124602|gb|ADG95962.1| ribosomal protein S4 [Lilium chalcedonicum] gi|296124611|gb|ADG95966.1| ribosomal protein S4 [Lilium pyrenaicum subsp. carniolicum] gi|296124613|gb|ADG95967.1| ribosomal protein S4 [Lilium pyrenaicum subsp. carniolicum] Length = 45 Score = 44.1 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP 26 >gi|303228177|emb|CAR65308.1| ribosomal protein S4 protein [Pinnatella taiwanensis] Length = 46 Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSS 31 >gi|68069555|ref|XP_676689.1| 40S ribosomal subunit protein S9 [Plasmodium berghei strain ANKA] gi|56496498|emb|CAH95070.1| 40S ribosomal subunit protein S9, putative [Plasmodium berghei] Length = 168 Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80 N R + + + + L L K + + G E R + ++ ++ Sbjct: 16 KNKREIWRVQYLLAKIRSAARYLLTLDEKSPKRIFQG---EALLRRMVRQGLLGENEEKL 72 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L LE RL T V++ ++ AR + RH+ V + V+I S+ + Sbjct: 73 DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRIDSE 132 Query: 141 IEV 143 + Sbjct: 133 KHI 135 >gi|189342268|gb|ACD91713.1| ribosomal protein S4 [Cousinia lomakini] Length = 38 Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|56752913|gb|AAW24668.1| SJCHGC07042 protein [Schistosoma japonicum] Length = 234 Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + ++ + + FLE RL T V++ +I AR + RH+ V + VN Sbjct: 86 LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 145 Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLA 160 + + ++ S + A Q+A Sbjct: 146 FMVRLDSGKHIELPSHTAPLWVAAPQVA 173 >gi|189342184|gb|ACD91671.1| ribosomal protein S4 [Saussurea elegans] gi|189342186|gb|ACD91672.1| ribosomal protein S4 [Saussurea maximowiczii] gi|189342188|gb|ACD91673.1| ribosomal protein S4 [Jurinea albicaulis] gi|189342190|gb|ACD91674.1| ribosomal protein S4 [Jurinea humilis] Length = 45 Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K RR+G K P G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYR 45 >gi|238617472|gb|ACR46868.1| ribosomal protein S4 [Centaurea granatensis] Length = 32 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|50344472|emb|CAH04322.1| S9e ribosomal protein [Meladema coriacea] Length = 193 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK R +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDENRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFIVRLDSQKHIDFSLKS 164 >gi|302505130|ref|XP_003014786.1| hypothetical protein ARB_07347 [Arthroderma benhamiae CBS 112371] gi|291178092|gb|EFE33883.1| hypothetical protein ARB_07347 [Arthroderma benhamiae CBS 112371] Length = 247 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VYR +I AR + RH+ V + VN+ S+ Sbjct: 157 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 200 >gi|189342312|gb|ACD91735.1| ribosomal protein S4 [Cousinia smirnowii] gi|189342356|gb|ACD91757.1| ribosomal protein S4 [Cousinia hypoleuca] Length = 45 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K RR+G K P G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----XAGSDLRNQSRSGKKSQYR 45 >gi|67595276|ref|XP_665990.1| 40S ribosomal subunit protein S9 [Cryptosporidium hominis TU502] gi|126654511|ref|XP_001388426.1| 40S ribosomal subunit protein S9 [Cryptosporidium parvum Iowa II] gi|54656881|gb|EAL35760.1| 40S ribosomal subunit protein S9 [Cryptosporidium hominis] gi|126117366|gb|EAZ51466.1| 40S ribosomal subunit protein S9, putative [Cryptosporidium parvum Iowa II] Length = 109 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%) Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +E + + FLE RL T V++ +I AR + H+ V + V++ S+ Sbjct: 9 EEERKLDYVLGLTISKFLERRLQTRVFKLGLAKSIHHARVLIRQNHIRVGRQIVDVPSFM 68 Query: 135 CK 136 + Sbjct: 69 VR 70 >gi|189342462|gb|ACD91810.1| ribosomal protein S4 [Cousinia kokanica] gi|189342464|gb|ACD91811.1| ribosomal protein S4 [Cousinia xanthacantha] Length = 44 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|27260898|gb|AAN86049.1| ribosomal protein S9 [Spodoptera frugiperda] Length = 113 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G + EK+ + + + FLE RL T V++A +I AR + RH+ Sbjct: 5 GVLDEKQMKLDYVLGLKIED--------FLERRLQTQVFKAGLAKSIHHARILIRQRHIR 56 Query: 123 VNGRSVNIGSYRCK 136 V + VNI S+ + Sbjct: 57 VRKQVVNIPSFIVR 70 >gi|294337172|emb|CAQ52736.1| ribosomal protein S4 [Hookeria acutifolia] Length = 46 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + KI RR+G K P S Sbjct: 1 MSRYRGPRVKIVRRLGVLPGLTNKIPQLKSS 31 >gi|294337098|emb|CAQ52699.1| ribosomal protein S4 [Cryptoleptodon longisetus] gi|294337192|emb|CAQ52746.1| ribosomal protein S4 [Leptodon smithii] gi|303228095|emb|CAR65267.1| ribosomal protein S4 protein [Alsia californica] gi|303228103|emb|CAR65271.1| ribosomal protein S4 protein [Cryptoleptodon pluvinii] gi|303228123|emb|CAR65281.1| ribosomal protein S4 protein [Neckera besseri] gi|303228125|emb|CAR65282.1| ribosomal protein S4 protein [Neckera brownii] gi|303228127|emb|CAR65283.1| ribosomal protein S4 protein [Neckera complanata] gi|303228131|emb|CAR65285.1| ribosomal protein S4 protein [Neckera crispa] gi|303228133|emb|CAR65286.1| ribosomal protein S4 protein [Neckera douglasii] gi|303228135|emb|CAR65287.1| ribosomal protein S4 protein [Neckera goughiana] gi|303228141|emb|CAR65290.1| ribosomal protein S4 protein [Neckera intermedia] gi|303228143|emb|CAR65291.1| ribosomal protein S4 protein [Neckera jamesonii] gi|303228145|emb|CAR65292.1| ribosomal protein S4 protein [Metaneckera menziesii] gi|303228151|emb|CAR65295.1| ribosomal protein S4 protein [Neckera scabridens] gi|303228155|emb|CAR65297.1| ribosomal protein S4 protein [Neckera valentiniana] gi|303228159|emb|CAR65299.1| ribosomal protein S4 protein [Neckera yezoana] gi|325530347|emb|CAX53447.1| ribosomal protein S4 [Leptodon smithii] gi|325530349|emb|CAX53448.1| ribosomal protein S4 [Leptodon smithii] gi|325530351|emb|CAX53449.1| ribosomal protein S4 [Leptodon smithii] gi|325530353|emb|CAX53450.1| ribosomal protein S4 [Leptodon smithii] gi|325530355|emb|CAX53451.1| ribosomal protein S4 [Leptodon smithii] gi|325530357|emb|CAX53452.1| ribosomal protein S4 [Leptodon sp. W178] gi|325530359|emb|CAX53453.1| ribosomal protein S4 [Leptodon smithii] gi|325910586|emb|CAX53715.1| ribosomal protein S4 [Leptodon sp. B564] gi|325910588|emb|CAX53716.1| ribosomal protein S4 [Leptodon sp. W178] Length = 46 Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+ S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSS 31 >gi|159145756|gb|ABW90415.1| putative ribosomal protein S9 [Barentsia elongata] Length = 194 Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + L +K + + EK R +F+ Sbjct: 21 KERLDQELKLIGEYGLRNKREVWRVKYLLAKMRKTARVLLTLDEKDPRRLFEGNALLRRL 80 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E + + FLE RL T V++ +I AR + RH+ V + Sbjct: 81 VRIGVLDEEKMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 140 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI SY + + K Sbjct: 141 VNIPSYVVRLDSQKHIDFSLKS 162 >gi|189342372|gb|ACD91765.1| ribosomal protein S4 [Cousinia heterophylla] gi|189342400|gb|ACD91779.1| ribosomal protein S4 [Cousinia heteroloba] gi|189342426|gb|ACD91792.1| ribosomal protein S4 [Cousinia vicaria] Length = 44 Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 4/48 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYF 48 MS+ + K RR+G K P G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQY 44 >gi|330993480|ref|ZP_08317415.1| Heat shock protein 15-like protein [Gluconacetobacter sp. SXCC-1] gi|329759510|gb|EGG76019.1| Heat shock protein 15-like protein [Gluconacetobacter sp. SXCC-1] Length = 99 Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD + A+F + A Q HV +N + V + GD++ + ++ V Sbjct: 13 QRLDLWLLHARFGRSRTACAQLATGGHVRINRQRVTKAHAQVHVGDILTLPSPDRKTVIV 72 Query: 154 LEASQLAER 162 + AER Sbjct: 73 IRVRACAER 81 >gi|124506321|ref|XP_001351758.1| 40S ribosomal protein S9, putative [Plasmodium falciparum 3D7] gi|23504687|emb|CAD51565.1| 40S ribosomal protein S9, putative [Plasmodium falciparum 3D7] Length = 189 Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80 N R + + + + L L K + + G E R + ++ ++ Sbjct: 37 KNKREIWRVQYLLAKIRSAARYLLTLDEKSSKRIFQG---EALLRRMVRQGLLGENEEKL 93 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L LE RL T V++ ++ AR + RH+ V + V+I S+ + Sbjct: 94 DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSE 153 Query: 141 IEV 143 + Sbjct: 154 KHI 156 >gi|189342478|gb|ACD91818.1| ribosomal protein S4 [Cousinia greuteri] Length = 43 Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|42794706|gb|AAS45748.1| Rps4 [Themistoclesia costaricensis] Length = 26 Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKP 26 >gi|189342218|gb|ACD91688.1| ribosomal protein S4 [Cousinia pineticola] Length = 44 Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 11/29 (37%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT 29 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPXTR 29 >gi|172044755|gb|ACB69930.1| ribosomal protein S4 [Oligochaeta ramosa] Length = 45 Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|294337094|emb|CAQ52697.1| ribosomal protein S4 [Cratoneuropsis relaxa] Length = 46 Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K P S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSS 31 >gi|167526531|ref|XP_001747599.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774045|gb|EDQ87679.1| predicted protein [Monosiga brevicollis MX1] Length = 196 Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G G R K + L +K + + EK R +F+ Sbjct: 27 KARLDQELKLVGEFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPRRLFEGNAILRRL 86 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 87 IRLGVIDEDRMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 146 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ SY + + K Sbjct: 147 VNVPSYMVRLDSQKHIDFALKS 168 >gi|84489670|ref|YP_447902.1| 30S ribosomal protein S4P [Methanosphaera stadtmanae DSM 3091] gi|121697850|sp|Q2NFZ4|RS4_METST RecName: Full=30S ribosomal protein S4P gi|84372989|gb|ABC57259.1| 30S ribosomal protein S4P [Methanosphaera stadtmanae DSM 3091] Length = 182 Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + N+ L RL ++V++ T AR FV H H+ +NG+ +N + + Sbjct: 86 NAKLEEVLDLNVEDILRRRLQSLVFKRGLSHTAKEARLFVVHGHITLNGKKINAPGHLVE 145 >gi|254167741|ref|ZP_04874591.1| ribosomal protein S4 [Aciduliprofundum boonei T469] gi|289597070|ref|YP_003483766.1| ribosomal protein S4 [Aciduliprofundum boonei T469] gi|197623269|gb|EDY35834.1| ribosomal protein S4 [Aciduliprofundum boonei T469] gi|289534857|gb|ADD09204.1| ribosomal protein S4 [Aciduliprofundum boonei T469] Length = 187 Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L RL TIVY T ARQF+ H H+ + R V I SY ++ + Sbjct: 103 DILRRRLQTIVYLKGLARTPKQARQFIVHGHIAIGDRKVTIPSYLVRKEEE 153 >gi|301154074|emb|CAR31435.1| ribosomal protein S4 protein [Pinnatella kuehliana] gi|303228169|emb|CAR65304.1| ribosomal protein S4 protein [Pinnatella ambigua] gi|303228175|emb|CAR65307.1| ribosomal protein S4 protein [Pinnatella makinoi] Length = 46 Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+P S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGSTNKTPQLKSS 31 >gi|71028602|ref|XP_763944.1| 40S ribosomal protein S9 [Theileria parva strain Muguga] gi|68350898|gb|EAN31661.1| 40S ribosomal protein S9, putative [Theileria parva] Length = 188 Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 3/120 (2%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGD 83 N R + + + + L L K + + G+ ++ + + Sbjct: 37 KNKREVWRVQYVLSKIRSAARYLLTLDPKDNKRLFQGEALLRRMVRYGLMNENEQKLDFV 96 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 L +E RL T V++ +I AR + RH+ V+ + V+I S+ + + Sbjct: 97 LGLTLSKLMERRLQTKVFKLGLAKSIHHARCLIRQRHICVHRQLVDIPSFLVRVDSEKHI 156 >gi|224000067|ref|XP_002289706.1| RS9, ribosomal protein 9 [Thalassiosira pseudonana CCMP1335] gi|220974914|gb|EED93243.1| RS9, ribosomal protein 9 [Thalassiosira pseudonana CCMP1335] Length = 190 Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 LE RL T V++ +I AR + RH+ V G+ VN+ S+ + + + Sbjct: 103 TQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHISVGGQLVNVPSFNVRTSSEKHIDISA 162 Query: 148 KQ 149 Sbjct: 163 DS 164 >gi|254167203|ref|ZP_04874056.1| ribosomal protein S4 [Aciduliprofundum boonei T469] gi|197624059|gb|EDY36621.1| ribosomal protein S4 [Aciduliprofundum boonei T469] Length = 187 Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L RL TIVY T ARQF+ H H+ + R V I SY ++ + Sbjct: 103 DILRRRLQTIVYLKGLARTPKQARQFIVHGHIAIGDRKVTIPSYLVRKEEE 153 >gi|126952073|gb|ABO28147.1| ribosomal protein S4 [Citrus x paradisi] Length = 60 Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRP 26 >gi|49532932|dbj|BAD26701.1| ribosomal protein S9 [Plutella xylostella] Length = 194 Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK + +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++A +I AR + RH+ V + Sbjct: 83 VRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 143 VNIPSFIVR 151 >gi|302668072|ref|XP_003025614.1| hypothetical protein TRV_00254 [Trichophyton verrucosum HKI 0517] gi|291189729|gb|EFE45003.1| hypothetical protein TRV_00254 [Trichophyton verrucosum HKI 0517] Length = 271 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VYR +I AR + RH+ V + VN+ S+ Sbjct: 181 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 224 >gi|84996521|ref|XP_952982.1| 40S ribosomal protein S9 [Theileria annulata strain Ankara] gi|65303978|emb|CAI76357.1| 40S ribosomal protein S9, putative [Theileria annulata] Length = 188 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 3/120 (2%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGD 83 N R + + + + L L K + + G+ ++ + + Sbjct: 37 KNKREVWRVQYVLSKIRSAARYLLTLDPKDNKRLFQGEALLRRMVRYGLMNENEQKLDFV 96 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 L +E RL T V++ +I AR + RH+ V+ + V+I S+ + + Sbjct: 97 LGLTLSKLMERRLQTKVFKLGLAKSIHHARCLIRQRHICVHRQLVDIPSFLVRVDSEKHI 156 >gi|159488620|ref|XP_001702303.1| ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii] gi|158271208|gb|EDO97033.1| ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii] Length = 190 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E + D+ + FLE RL T+V++ +I AR + RH+ Sbjct: 85 YGLLNESQ--------DKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158 >gi|189342442|gb|ACD91800.1| ribosomal protein S4 [Cousinia tenuisecta] Length = 45 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|217075114|gb|ACJ85917.1| unknown [Medicago truncatula] Length = 197 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 9/121 (7%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88 R + R + L L K + + G E R +FK + Sbjct: 41 KRELWRVQYALSRIRNNARTLLTLDEKNPRRIFEG---EALLRRMFKHGLLDETQNKLDY 97 Query: 89 I------SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 + +FLE RL T+V+++ +I AR + RH+ V + VNI S+ + Sbjct: 98 VLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKH 157 Query: 143 V 143 + Sbjct: 158 I 158 >gi|156095444|ref|XP_001613757.1| 40S ribosomal protein S9 [Plasmodium vivax SaI-1] gi|148802631|gb|EDL44030.1| 40S ribosomal protein S9, putative [Plasmodium vivax] Length = 189 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80 N R + + + + L L K + + G E R + ++ ++ Sbjct: 37 KNKREIWRVQYLLAKIRSAARYLLTLDEKSSKRIFQG---EALLRRMVRQGLLGENEEKL 93 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L LE RL T V++ ++ AR + RH+ V + V+I S+ + Sbjct: 94 DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSE 153 Query: 141 IEV 143 + Sbjct: 154 KHI 156 >gi|83286205|ref|XP_730059.1| ribosomal protein S4 [Plasmodium yoelii yoelii str. 17XNL] gi|23489625|gb|EAA21624.1| ribosomal protein S4, putative [Plasmodium yoelii yoelii] Length = 214 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80 N R + + + + L L K + + G E R + ++ ++ Sbjct: 37 KNKREIWRVQYLLAKIRSAARYLLTLDEKSPKRIFQG---EALLRRMVRQGLLGENEEKL 93 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L LE RL T V++ ++ AR + RH+ V + V+I S+ + Sbjct: 94 DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRIDSE 153 Query: 141 IEV 143 + Sbjct: 154 KHI 156 >gi|157690738|tpe|CAL69096.1| TPA: putative 40S ribosomal protein S9 [Spadella cephaloptera] Length = 189 Score = 43.8 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G G R K + L L +K + + EK R +F+ Sbjct: 21 KERLDQELKLIGEFGLRNKREVWRVKLALAKIRKSARILLTLEEKDPRRLFEGNALLRRL 80 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 81 VRIGVLDESKMKLDYVLGLQVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQL 140 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + K Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162 >gi|330931906|ref|XP_003303583.1| hypothetical protein PTT_15843 [Pyrenophora teres f. teres 0-1] gi|311320337|gb|EFQ88321.1| hypothetical protein PTT_15843 [Pyrenophora teres f. teres 0-1] Length = 270 Score = 43.8 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 3/112 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDT 84 N R + + + L L K + + G+ ++ + + + Sbjct: 114 NKREVWRVQLTLSKIRRAARSLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVL 173 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 174 ALKIEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 225 >gi|166952357|gb|ABZ04261.1| ribosomal protein rps9 [Lineus viridis] Length = 194 Score = 43.8 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 50/151 (33%), Gaps = 21/151 (13%) Query: 20 WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK------ 68 + P+ P G +G R K + L L +K + + EK Sbjct: 12 FATPRRPFEKERLDQELKLIGEYGLRNKREVWRIKLTLAKIRKAARELLTLDEKDPKRLF 71 Query: 69 ----KFRSIFKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 R + + + L F+E RL T V++ +I AR + Sbjct: 72 EGNALLRRLVRIGVLDEGKMKLDYVLGLRLEDFMERRLQTQVFKLGLAKSIHHARVLIRQ 131 Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 RH+ V + VNI SY + + K Sbjct: 132 RHIRVRTQVVNIPSYIVRLDSQKHIDFSLKS 162 >gi|221056951|ref|XP_002259613.1| 40S ribosomal subunit protein S9 [Plasmodium knowlesi strain H] gi|193809685|emb|CAQ40386.1| 40S ribosomal subunit protein S9, putative [Plasmodium knowlesi strain H] Length = 189 Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80 N R + + + + L L K + + G E R + ++ ++ Sbjct: 37 KNKREIWRVQYLLAKIRSAARYLLTLDEKSSKRIFQG---EALLRRMVRQGLLGENEEKL 93 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L LE RL T V++ ++ AR + RH+ V + V+I S+ + Sbjct: 94 DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSE 153 Query: 141 IEV 143 + Sbjct: 154 KHI 156 >gi|189342200|gb|ACD91679.1| ribosomal protein S4 [Cousinia amplissima] Length = 44 Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|189342270|gb|ACD91714.1| ribosomal protein S4 [Cousinia syrdariensis] Length = 45 Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K RR+G K P G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRNQSRSGKKSQYR 45 >gi|6687299|emb|CAB64903.1| 40S ribosomal protein S9 [Cyanophora paradoxa] Length = 101 Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + FLE RL T V++ +I AR + RH+ V + VNI S+ + + Sbjct: 6 GLKIQDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNIPSFMVRVDSQKHI 64 >gi|325120464|emb|CBZ56018.1| hypothetical protein NCLIV_064440 [Neospora caninum Liverpool] Length = 188 Score = 43.4 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%) Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 + + FLE RL T V++ +I AR + RH+ V V+I S+ + Sbjct: 91 QKLDYVLGLTVAKFLERRLQTKVFKLGLAKSIHHARVLIRQRHIRVGKHIVDIPSFMVRV 150 Query: 138 GDVIEV 143 V Sbjct: 151 DSEKHV 156 >gi|237835795|ref|XP_002367195.1| 40S ribosomal protein S9, putative [Toxoplasma gondii ME49] gi|211964859|gb|EEB00055.1| 40S ribosomal protein S9, putative [Toxoplasma gondii ME49] gi|221485275|gb|EEE23556.1| 40S ribosomal protein S9, putative [Toxoplasma gondii GT1] gi|221506130|gb|EEE31765.1| 40S ribosomal protein S9, putative [Toxoplasma gondii VEG] Length = 188 Score = 43.4 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%) Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137 + + FLE RL T V++ +I AR + RH+ V V+I S+ + Sbjct: 91 QKLDYVLGLTVAKFLERRLQTKVFKLGLAKSIHHARVLIRQRHIRVGKHIVDIPSFMVRV 150 Query: 138 GDVIEV 143 V Sbjct: 151 DSEKHV 156 >gi|328874713|gb|EGG23078.1| ribosomal protein [Dictyostelium fasciculatum] Length = 187 Score = 43.4 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ + + G G + K++ L L +K + + EK+ + IF+ Sbjct: 18 KARIESELKVIGEFGLKNKNEVWRVQLALAKIRKSARELLILHEKEPKRIFQGAALLRRL 77 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 ++ + F+E RL T+V++ +I AR + RH+ V + Sbjct: 78 HKIGVMDESKNKLDYVLGLKVQDFMERRLQTLVFKQGLAKSIHHARVLIKGRHIRVGKQL 137 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ SY + + + Sbjct: 138 VNVPSYMVRVDSEKHIGMNPRS 159 >gi|303228153|emb|CAR65296.1| ribosomal protein S4 protein [Neckera submacrocarpa] Length = 46 Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K+ S Sbjct: 1 MSRYRGPRVRIIRRLGILPGLTNKTSQLKSS 31 >gi|70909509|emb|CAJ17220.1| ribosomal protein S9e [Sphaerius sp. APV-2005] Length = 193 Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 92 RMKLDYVLGLTITDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 151 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 152 LDSQKHIDFSLKS 164 >gi|172044747|gb|ACB69926.1| ribosomal protein S4 [Centaurothamnus maximus] gi|172044749|gb|ACB69927.1| ribosomal protein S4 [Ochrocephala imatongensis] gi|172044751|gb|ACB69928.1| ribosomal protein S4 [Oligochaeta divaricata] gi|172044753|gb|ACB69929.1| ribosomal protein S4 [Oligochaeta minima] gi|172044757|gb|ACB69931.1| ribosomal protein S4 [Myopordon pulchellum] gi|172044759|gb|ACB69932.1| ribosomal protein S4 [Myopordon hyrcanum] gi|172044761|gb|ACB69933.1| ribosomal protein S4 [Myopordon persicum] gi|172044763|gb|ACB69934.1| ribosomal protein S4 [Myopordon aucheri] gi|189342192|gb|ACD91675.1| ribosomal protein S4 [Cousinia triflora] gi|189342194|gb|ACD91676.1| ribosomal protein S4 [Cousinia pseudarctium] gi|189342196|gb|ACD91677.1| ribosomal protein S4 [Cousinia umbrosa] gi|189342198|gb|ACD91678.1| ribosomal protein S4 [Cousinia tomentella] gi|189342202|gb|ACD91680.1| ribosomal protein S4 [Cousinia albertii] gi|189342204|gb|ACD91681.1| ribosomal protein S4 [Cousinia medians] gi|189342206|gb|ACD91682.1| ribosomal protein S4 [Cousinia karatavica] gi|189342208|gb|ACD91683.1| ribosomal protein S4 [Cousinia korshinskyi] gi|189342210|gb|ACD91684.1| ribosomal protein S4 [Cousinia korolkowii] gi|189342212|gb|ACD91685.1| ribosomal protein S4 [Cousinia tenella] gi|189342216|gb|ACD91687.1| ribosomal protein S4 [Cousinia sogdiana] gi|189342220|gb|ACD91689.1| ribosomal protein S4 [Cousinia cylindracea] gi|189342224|gb|ACD91691.1| ribosomal protein S4 [Cousinia adenosticta] gi|189342226|gb|ACD91692.1| ribosomal protein S4 [Cousinia refracta] gi|189342228|gb|ACD91693.1| ribosomal protein S4 [Cousinia lappacea] gi|189342230|gb|ACD91694.1| ribosomal protein S4 [Cousinia abolinii] gi|189342232|gb|ACD91695.1| ribosomal protein S4 [Cousinia grandifolia] gi|189342234|gb|ACD91696.1| ribosomal protein S4 [Cousinia anomala] gi|189342236|gb|ACD91697.1| ribosomal protein S4 [Cousinia stocksii] gi|189342238|gb|ACD91698.1| ribosomal protein S4 [Cousinia dolichophylla] gi|189342240|gb|ACD91699.1| ribosomal protein S4 [Cousinia arctioides] gi|189342244|gb|ACD91701.1| ribosomal protein S4 [Cousinia chlorantha] gi|189342246|gb|ACD91702.1| ribosomal protein S4 [Arctium leiospermum] gi|189342248|gb|ACD91703.1| ribosomal protein S4 [Arctium minus] gi|189342250|gb|ACD91704.1| ribosomal protein S4 [Arctium lappa] gi|189342252|gb|ACD91705.1| ribosomal protein S4 [Schmalhausenia nidulans] gi|189342256|gb|ACD91707.1| ribosomal protein S4 [Cousinia pallidivirens] gi|189342258|gb|ACD91708.1| ribosomal protein S4 [Cousinia tianschanica] gi|189342260|gb|ACD91709.1| ribosomal protein S4 [Cousinia regelii] gi|189342266|gb|ACD91712.1| ribosomal protein S4 [Cousinia congesta] gi|189342272|gb|ACD91715.1| ribosomal protein S4 [Cousinia salangensis] gi|189342274|gb|ACD91716.1| ribosomal protein S4 [Cousinia minkwitziae] gi|189342276|gb|ACD91717.1| ribosomal protein S4 [Cousinia chrysantha] gi|189342278|gb|ACD91718.1| ribosomal protein S4 [Cousinia purpurea] gi|189342280|gb|ACD91719.1| ribosomal protein S4 [Cousinia polycephala] gi|189342282|gb|ACD91720.1| ribosomal protein S4 [Tiarocarpus hymenostephanus] gi|189342284|gb|ACD91721.1| ribosomal protein S4 [Tiarocarpus neubaueri] gi|189342286|gb|ACD91722.1| ribosomal protein S4 [Cousinia dissecta] gi|189342288|gb|ACD91723.1| ribosomal protein S4 [Cousinia meghrica] gi|189342290|gb|ACD91724.1| ribosomal protein S4 [Cousinia crassipes] gi|189342292|gb|ACD91725.1| ribosomal protein S4 [Cousinia coerulea] gi|189342294|gb|ACD91726.1| ribosomal protein S4 [Cousinia chaetocephala] gi|189342296|gb|ACD91727.1| ribosomal protein S4 [Cousinia harazensis] gi|189342298|gb|ACD91728.1| ribosomal protein S4 [Cousinia hastifolia] gi|189342300|gb|ACD91729.1| ribosomal protein S4 [Cousinia chrysochlora] gi|189342302|gb|ACD91730.1| ribosomal protein S4 [Cousinia immitantiformis] gi|189342304|gb|ACD91731.1| ribosomal protein S4 [Cousinia concolor] gi|189342306|gb|ACD91732.1| ribosomal protein S4 [Cousinia oreodoxa] gi|189342308|gb|ACD91733.1| ribosomal protein S4 [Cousinia komarovii] gi|189342314|gb|ACD91736.1| ribosomal protein S4 [Cousinia dipterocarpa] gi|189342316|gb|ACD91737.1| ribosomal protein S4 [Cousinia turkmenorum] gi|189342318|gb|ACD91738.1| ribosomal protein S4 [Cryptococcus laurentii] gi|189342320|gb|ACD91739.1| ribosomal protein S4 [Cousinia longifolia] gi|189342322|gb|ACD91740.1| ribosomal protein S4 [Cousinia gatchsaranica] gi|189342324|gb|ACD91741.1| ribosomal protein S4 [Cousinia eriophylla] gi|189342326|gb|ACD91742.1| ribosomal protein S4 [Cousinia rechingerorum] gi|189342328|gb|ACD91743.1| ribosomal protein S4 [Cousinia apiculata] gi|189342330|gb|ACD91744.1| ribosomal protein S4 [Cousinia trachyphyllaria] gi|189342332|gb|ACD91745.1| ribosomal protein S4 [Cousinia eryngioides] gi|189342334|gb|ACD91746.1| ribosomal protein S4 [Cousinia arctotidifolia] gi|189342336|gb|ACD91747.1| ribosomal protein S4 [Cousinia badghysi] gi|189342338|gb|ACD91748.1| ribosomal protein S4 [Cousinia ecbatanensis] gi|189342342|gb|ACD91750.1| ribosomal protein S4 [Cousinia macrocephala] gi|189342344|gb|ACD91751.1| ribosomal protein S4 [Cousinia leucantha] gi|189342346|gb|ACD91752.1| ribosomal protein S4 [Cousinia tenuifolia] gi|189342348|gb|ACD91753.1| ribosomal protein S4 [Cousinia heliantha] gi|189342350|gb|ACD91754.1| ribosomal protein S4 [Cousinia brachyptera] gi|189342352|gb|ACD91755.1| ribosomal protein S4 [Cousinia turcomanica] gi|189342354|gb|ACD91756.1| ribosomal protein S4 [Cousinia severzowii] gi|189342358|gb|ACD91758.1| ribosomal protein S4 [Cousinia lasiolepis] gi|189342360|gb|ACD91759.1| ribosomal protein S4 [Cousinia coronata] gi|189342362|gb|ACD91760.1| ribosomal protein S4 [Cousinia buphthalmoides] gi|189342364|gb|ACD91761.1| ribosomal protein S4 [Cousinia shahvarica] gi|189342366|gb|ACD91762.1| ribosomal protein S4 [Cousinia alexeenkoana] gi|189342374|gb|ACD91766.1| ribosomal protein S4 [Cousinia lasiandra] gi|189342376|gb|ACD91767.1| ribosomal protein S4 [Cousinia pugionifera] gi|189342378|gb|ACD91768.1| ribosomal protein S4 [Cousinia rigidissima] gi|189342380|gb|ACD91769.1| ribosomal protein S4 [Cousinia xiphiolepis] gi|189342382|gb|ACD91770.1| ribosomal protein S4 [Cousinia pusilla] gi|189342384|gb|ACD91771.1| ribosomal protein S4 [Cousinia scariosa] gi|189342386|gb|ACD91772.1| ribosomal protein S4 [Cousinia auriculata] gi|189342388|gb|ACD91773.1| ribosomal protein S4 [Cousinia sarawschanica] gi|189342390|gb|ACD91774.1| ribosomal protein S4 [Cousinia franchetii] gi|189342392|gb|ACD91775.1| ribosomal protein S4 [Cousinia raddeana] gi|189342394|gb|ACD91776.1| ribosomal protein S4 [Cousinia candolleana] gi|189342396|gb|ACD91777.1| ribosomal protein S4 [Cousinia egregia] gi|189342398|gb|ACD91778.1| ribosomal protein S4 [Cousinia splendida] gi|189342404|gb|ACD91781.1| ribosomal protein S4 [Cousinia antonowii] gi|189342406|gb|ACD91782.1| ribosomal protein S4 [Cousinia qaisarensis] gi|189342408|gb|ACD91783.1| ribosomal protein S4 [Cousinia multiloba] gi|189342410|gb|ACD91784.1| ribosomal protein S4 [Cousinia olgae] gi|189342412|gb|ACD91785.1| ribosomal protein S4 [Cousinia piptocephala] gi|189342414|gb|ACD91786.1| ribosomal protein S4 [Cousinia urumiensis] gi|189342416|gb|ACD91787.1| ribosomal protein S4 [Cousinia leptolepis] gi|189342418|gb|ACD91788.1| ribosomal protein S4 [Cousinia gmelini] gi|189342420|gb|ACD91789.1| ribosomal protein S4 [Cousinia oligocephala] gi|189342424|gb|ACD91791.1| ribosomal protein S4 [Cousinia belangeri] gi|189342428|gb|ACD91793.1| ribosomal protein S4 [Cousinia thamnodes] gi|189342430|gb|ACD91794.1| ribosomal protein S4 [Cousinia semilacera] gi|189342432|gb|ACD91795.1| ribosomal protein S4 [Cousinia tenuiramula] gi|189342434|gb|ACD91796.1| ribosomal protein S4 [Cousinia macroptera] gi|189342436|gb|ACD91797.1| ribosomal protein S4 [Cousinia daralaghezica] gi|189342438|gb|ACD91798.1| ribosomal protein S4 [Cousinia radians] gi|189342440|gb|ACD91799.1| ribosomal protein S4 [Cousinia lanata] gi|189342444|gb|ACD91801.1| ribosomal protein S4 [Cousinia incompta] gi|189342446|gb|ACD91802.1| ribosomal protein S4 [Cousinia ariana] gi|189342448|gb|ACD91803.1| ribosomal protein S4 [Cousinia rigida] gi|189342450|gb|ACD91804.1| ribosomal protein S4 [Cousinia alfredii] gi|189342452|gb|ACD91805.1| ribosomal protein S4 [Cousinia ninae] gi|189342454|gb|ACD91806.1| ribosomal protein S4 [Cousinia dubia] gi|189342456|gb|ACD91807.1| ribosomal protein S4 [Cousinia chlorocephala] gi|189342458|gb|ACD91808.1| ribosomal protein S4 [Cousinia oxiana] gi|189342460|gb|ACD91809.1| ribosomal protein S4 [Cousinia spryginii] gi|189342466|gb|ACD91812.1| ribosomal protein S4 [Cousinia polyneura] gi|189342468|gb|ACD91813.1| ribosomal protein S4 [Cousinia oopoda] gi|189342470|gb|ACD91814.1| ribosomal protein S4 [Cousinia podophylla] gi|189342472|gb|ACD91815.1| ribosomal protein S4 [Cousinia tashkurghanica] gi|189342474|gb|ACD91816.1| ribosomal protein S4 [Cousinia intertexta] gi|189342476|gb|ACD91817.1| ribosomal protein S4 [Cousinia platylepis] gi|189342480|gb|ACD91819.1| ribosomal protein S4 [Cousinia submutica] gi|189342482|gb|ACD91820.1| ribosomal protein S4 [Cousinia ferruginea] gi|189342484|gb|ACD91821.1| ribosomal protein S4 [Cousinia jassyensis] gi|189342486|gb|ACD91822.1| ribosomal protein S4 [Cousinia crispa] gi|189342488|gb|ACD91823.1| ribosomal protein S4 [Cousinia batalinii] gi|189342490|gb|ACD91824.1| ribosomal protein S4 [Cousinia pannosa] gi|189342492|gb|ACD91825.1| ribosomal protein S4 [Cousinia polytimetica] gi|189342494|gb|ACD91826.1| ribosomal protein S4 [Cousinia prolifera] gi|189342496|gb|ACD91827.1| ribosomal protein S4 [Cousinia speciosa] gi|189342502|gb|ACD91830.1| ribosomal protein S4 [Cousinia outichaschensis] gi|189342504|gb|ACD91831.1| ribosomal protein S4 [Cousinia botschantzevii] gi|189342506|gb|ACD91832.1| ribosomal protein S4 [Cousinia sclerophylla] gi|329350639|gb|AEB91330.1| ribosomal protein S4 [Cousinia aurea] gi|329350642|gb|AEB91331.1| ribosomal protein S4 [Cousinia fedtschenkoana] gi|329350645|gb|AEB91332.1| ribosomal protein S4 [Cousinia horrescens] Length = 45 Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K RR+G K P G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYR 45 >gi|242040777|ref|XP_002467783.1| hypothetical protein SORBIDRAFT_01g033980 [Sorghum bicolor] gi|241921637|gb|EER94781.1| hypothetical protein SORBIDRAFT_01g033980 [Sorghum bicolor] Length = 177 Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 5/129 (3%) Query: 20 WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 + +P+ P G +G R K + L + + + EK R IF Sbjct: 14 FKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARELLTLDEKNPRRIF 73 Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + ++ + + +FL+ RL TIV++ +I AR + RH+ V + VNI S+ Sbjct: 74 EGENKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHIRVGRQLVNIPSFM 133 Query: 135 CKEGDVIEV 143 + + Sbjct: 134 VRVDSEKHI 142 >gi|294337128|emb|CAQ52714.1| ribosomal protein S4 [Hampeella pallens] Length = 46 Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + KI RR+G K P + Sbjct: 1 MSRYRGPRVKIIRRLGNLPGLTNKIPQLKSN 31 >gi|309951484|gb|ADO95157.1| ribosomal protein S9 [Antheraea yamamai] Length = 194 Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK + +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++A +I AR + RH+ V + Sbjct: 83 VRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 143 VNIPSFIVR 151 >gi|168050227|ref|XP_001777561.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671046|gb|EDQ57604.1| predicted protein [Physcomitrella patens subsp. patens] Length = 197 Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDENQSKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + +FLE RL TIV+++ +I AR + RH+ V + V++ S+ + V Sbjct: 100 ALTVENFLERRLQTIVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHV 158 >gi|112984022|ref|NP_001037265.1| ribosomal protein S9 [Bombyx mori] gi|54609299|gb|AAV34865.1| ribosomal protein S9 [Bombyx mori] Length = 194 Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK + +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++A +I AR + RH+ V + Sbjct: 83 VRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 143 VNIPSFIVR 151 >gi|189342264|gb|ACD91711.1| ribosomal protein S4 [Cousinia bungeana] gi|189342500|gb|ACD91829.1| ribosomal protein S4 [Cousinia arachnoidea] gi|329350637|gb|AEB91329.1| ribosomal protein S4 [Arctium palladinii] Length = 45 Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|315115339|gb|ADT80642.1| ribosomal protein S9 [Euphydryas aurinia] Length = 194 Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK + +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++A +I AR + RH+ V + Sbjct: 83 VRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 143 VNIPSFIVR 151 >gi|237756133|ref|ZP_04584705.1| 30S ribosomal protein S4 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691697|gb|EEP60733.1| 30S ribosomal protein S4 [Sulfurihydrogenibium yellowstonense SS-5] Length = 52 Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 153 VLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205 E + + R VP ++ ++ DN+ V +++ + + ++E+YS Sbjct: 1 FKENLESRDPRSVPRWLELDKDNLRGKVV---EIPEEIELEIPVNVQYIIEYYS 51 >gi|168003337|ref|XP_001754369.1| predicted protein [Physcomitrella patens subsp. patens] gi|168017417|ref|XP_001761244.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687584|gb|EDQ73966.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694471|gb|EDQ80819.1| predicted protein [Physcomitrella patens subsp. patens] Length = 198 Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDENQSKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + +FLE RL T+V+++ +I AR + RH+ V + V++ S+ + V Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHV 158 >gi|168029425|ref|XP_001767226.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681481|gb|EDQ67907.1| predicted protein [Physcomitrella patens subsp. patens] Length = 198 Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDENQSKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + +FLE RL T+V+++ +I AR + RH+ V + V++ S+ + V Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHV 158 >gi|160347070|gb|ABX26127.1| ribosomal protein S9 [Haliotis discus discus] Length = 191 Score = 43.0 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 K ++ G +G R K + L +K + + EK+ R +F+ Sbjct: 21 KERLDQELKLIGEYGLRNKREVWRVKYTLARIRKSARELLTLDEKEPRRLFEGNALLRRL 80 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + L FLE RL T V++ +I AR + RH+ V + Sbjct: 81 VRIGVLDEGKMKLDYVLGLRLEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 140 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI SY + + + Sbjct: 141 VNIPSYVVRLDSQKHIDFSLRS 162 >gi|157876707|ref|XP_001686697.1| 40S ribosomal protein S9 [Leishmania major strain Friedlin] gi|66476134|gb|AAY51375.1| ribosomal protein S9 [Leishmania major] gi|68129772|emb|CAJ09078.1| putative 40S ribosomal protein S9 [Leishmania major strain Friedlin] Length = 190 Score = 43.0 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|288818047|ref|YP_003432394.1| hemolysin [Hydrogenobacter thermophilus TK-6] gi|288787446|dbj|BAI69193.1| hemolysin [Hydrogenobacter thermophilus TK-6] gi|308751648|gb|ADO45131.1| hemolysin A [Hydrogenobacter thermophilus TK-6] Length = 261 Score = 43.0 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD + F PT A+ + V V+G V+ + KEG I+VK+ + Sbjct: 1 MPRQRLDKKLVELGFAPTREKAQALIMAGMVTVDGLLVDKPGFLVKEGQKIDVKEPVR 58 >gi|148908089|gb|ABR17162.1| unknown [Picea sitchensis] gi|224284136|gb|ACN39805.1| unknown [Picea sitchensis] gi|224284446|gb|ACN39957.1| unknown [Picea sitchensis] gi|224286025|gb|ACN40724.1| unknown [Picea sitchensis] gi|294463673|gb|ADE77363.1| unknown [Picea sitchensis] Length = 197 Score = 43.0 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYTLSRIRNAARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDETQSKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + +FLE RL T+V+++ +I AR + RH+ V + VNI S+ + + Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158 >gi|42794714|gb|AAS45752.1| Rps4 [Thibaudia diphylla] Length = 59 Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 11/27 (40%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPV 27 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPK 27 >gi|157864530|ref|XP_001680975.1| 40S ribosomal protein S9 [Leishmania major strain Friedlin] gi|68124268|emb|CAJ07030.1| putative 40S ribosomal protein S9 [Leishmania major strain Friedlin] Length = 190 Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|303228109|emb|CAR65274.1| ribosomal protein S4 protein [Handeliobryum sikkimense] gi|303228121|emb|CAR65280.1| ribosomal protein S4 protein [Hydrocryphaea wardii] Length = 46 Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 13/31 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I R +G K+P S Sbjct: 1 MSRYRGPRVRIIRHLGTLPGLTNKTPQLKSS 31 >gi|146424326|gb|AAI41921.1| RPS9 protein [Homo sapiens] Length = 113 Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 30 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 89 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 90 LDSQKHIDFSLRS 102 >gi|166895637|ref|YP_001661430.1| ribosomal protein S4 [Cycas taitungensis] gi|166706969|dbj|BAF98433.1| ribosomal protein S4 [Cycas taitungensis] Length = 348 Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 20/137 (14%) Query: 10 KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69 +I RR+ R K ++ P + ++L+ +K+ +G++ K Sbjct: 27 RIPRRL------RSKRRSIKKNIYPRQN--------LNSYIKLQTIRKLPLSHGNLPIIK 72 Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 + + E+R D I R F TI ARQ ++HR + N VN Sbjct: 73 MHGGTERTSYIP------FLFNPETRSDVIPVRPHFRETIPQARQPISHRKIRANNEMVN 126 Query: 130 IGSYRCKEGDVIEVKQK 146 I + GD I +K Sbjct: 127 ITRSKVSHGDPIPIKDN 143 >gi|146077487|ref|XP_001463283.1| 40S ribosomal protein S9 [Leishmania infantum JPCM5] gi|146103077|ref|XP_001469478.1| 40S ribosomal protein S9 [Leishmania infantum] gi|134067367|emb|CAM65639.1| putative 40S ribosomal protein S9 [Leishmania infantum JPCM5] gi|134073848|emb|CAM72587.1| putative 40S ribosomal protein S9 [Leishmania infantum JPCM5] gi|322503484|emb|CBZ38569.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 190 Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|172044765|gb|ACB69935.1| ribosomal protein S4 [Rhaponticum pulchrum] gi|172044767|gb|ACB69936.1| ribosomal protein S4 [Rhaponticum repens] gi|189342254|gb|ACD91706.1| ribosomal protein S4 [Hypacanthium echinopifolium] Length = 45 Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K RR+G K P G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSVKKSQYR 45 >gi|255629938|gb|ACU15321.1| unknown [Glycine max] Length = 222 Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E + ++ + + +FLE RL T+V+++ +I AR + R Sbjct: 83 FRYGLLDETQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQR 134 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143 H+ V + VNI S+ + + Sbjct: 135 HIRVGRQVVNIPSFMVRVDSQKHI 158 >gi|189342262|gb|ACD91710.1| ribosomal protein S4 [Cousinia triceps] Length = 45 Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|154332394|ref|XP_001562571.1| 40S ribosomal protein S9 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059461|emb|CAM41687.1| putative 40S ribosomal protein S9 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 190 Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|291242674|ref|XP_002741225.1| PREDICTED: ribosomal protein S9-like [Saccoglossus kowalevskii] Length = 190 Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 21/159 (13%) Query: 12 DRRIGENLWGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66 R +G + P+ P G G R K + L L +K + + Sbjct: 1 MRIVGSKTYVTPRRPFEKERLDQELKLIGQFGLRNKREVWRVKLTLAKIRKAARELLTLD 60 Query: 67 EK----------KFRSIFKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 EK R + + + + FLE RL T V++ +I Sbjct: 61 EKDQKRLFEGNALLRRLVRIGVLDEGKMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIH 120 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 AR + RH+ V + VNI S+ + + K Sbjct: 121 HARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKS 159 >gi|116780962|gb|ABK21901.1| unknown [Picea sitchensis] gi|224284852|gb|ACN40156.1| unknown [Picea sitchensis] Length = 197 Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYTLSRIRNAARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + +FLE RL T+V+++ +I AR + RH+ V + VNI S+ + + Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158 >gi|268306404|gb|ACY95323.1| ribosomal protein S9 [Manduca sexta] Length = 194 Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 3/99 (3%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLD 97 R K + L L K + + G+ ++ + ++ + + FLE RL Sbjct: 53 RIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQ 112 Query: 98 TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 T V++A +I AR + RH+ V + VNI S+ + Sbjct: 113 TQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 151 >gi|255562786|ref|XP_002522398.1| 40S ribosomal protein S9, putative [Ricinus communis] gi|223538283|gb|EEF39890.1| 40S ribosomal protein S9, putative [Ricinus communis] Length = 196 Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 3/118 (2%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85 R + R + L L K + + + G+ ++ + ++ + Sbjct: 41 KRELWRVQYALSRIRNAARMLLTLDEKNQRRIFEGEALLRRMNRYGLLDESQNKLDYVLA 100 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + +FLE RL T+V+++ +I AR + RH+ V + VNI S+ + + Sbjct: 101 LTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158 >gi|329350647|gb|AEB91333.1| ribosomal protein S4 [Cousinia pentacantha] Length = 26 Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|329350652|gb|AEB91335.1| ribosomal protein S4 [Cousinia schmalhausenii] Length = 45 Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|242133532|gb|ACS87829.1| putative 40S ribosomal protein S9 [Crithidia sp. ATCC 30255] Length = 191 Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPETHPRRLLEGAAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|224140087|ref|XP_002323418.1| predicted protein [Populus trichocarpa] gi|118482457|gb|ABK93151.1| unknown [Populus trichocarpa] gi|118489211|gb|ABK96412.1| unknown [Populus trichocarpa x Populus deltoides] gi|222868048|gb|EEF05179.1| predicted protein [Populus trichocarpa] Length = 197 Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++A +I AR + +H+ Sbjct: 85 YGLLEESQ--------NKLDYVLALTVENFLERRLQTLVFKAGMAKSIHHARVLIKQKHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQVVNIPSFMVRVDSQKHI 158 >gi|154345646|ref|XP_001568760.1| 40S ribosomal protein S9 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066102|emb|CAM43890.1| putative 40S ribosomal protein S9 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 189 Score = 43.0 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|221043582|dbj|BAH13468.1| unnamed protein product [Homo sapiens] Length = 157 Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCK 136 VNI S+ Sbjct: 142 VNIPSFIVP 150 >gi|61654718|gb|AAX48885.1| S9 [Suberites domuncula] Length = 191 Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 16/126 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK + +F+ Sbjct: 19 KARLDQELKIIGQYGLRNKREVWRVKYTLAKIRKAARELLTLDEKSPKRLFEGNALLRRM 78 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 79 VRIGVLDESRMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIKQRHIRVRKQI 138 Query: 128 VNIGSY 133 VN+ S+ Sbjct: 139 VNVPSF 144 >gi|322828246|gb|EFZ32142.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi] Length = 160 Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 10/95 (10%) Query: 51 QLRAKQKMKKY--YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108 QL M++ YG + E E D+ S + LE RL T+V++ + Sbjct: 39 QLEGSAIMRRCHDYGFLEE--------EKDKLDYVLSLTVPDILERRLQTVVFKHGLAKS 90 Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + AR + RH+ V + V I S+ + + Sbjct: 91 VHHARVLILQRHIAVAKQIVTIPSFIVRVSSEHHI 125 >gi|291498623|gb|ADE08097.1| rps4-1 [Triticum aestivum] gi|291498624|gb|ADE08098.1| rps4-2 [Triticum aestivum] Length = 357 Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 13/147 (8%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 + + ++ + +K+ YYGD+ ++ + + E+R D I Sbjct: 45 RRENLNSNIKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPV 98 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R F T+ ARQ ++HR V +N V I + GD+I K+ + Sbjct: 99 RLHFSDTLPQARQPISHRRVCLNNGLVTITHLKVSHGDLISFKENDARTRGFEIRRSF-- 156 Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKD 188 YI ++ ++ F+ S K Sbjct: 157 -----YIDISVGKIIGKFLSAISVGKR 178 >gi|320167078|gb|EFW43977.1| S9 ribosomal protein [Capsaspora owczarzaki ATCC 30864] Length = 204 Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 R + FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 104 RMRLDFVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 160 >gi|6978048|gb|AAF34259.1| truncated ribosomal protein small subunit 4 [Pteridium aquilinum subsp. atlanticum] Length = 65 Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%) Query: 3 KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62 + + K+ RR+ + + Q K S F ++L AKQ+++ Y Sbjct: 1 RYRGPRLKLIRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRFNY 60 Query: 63 G 63 G Sbjct: 61 G 61 >gi|20093836|ref|NP_613683.1| RNA-binding protein [Methanopyrus kandleri AV19] gi|19886762|gb|AAM01613.1| Predicted RNA-binding protein containing the S4 domain [Methanopyrus kandleri AV19] Length = 79 Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 22/54 (40%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + RLD + + A++ V V VNG+ V + GD IEV Sbjct: 1 MTVGRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEV 54 >gi|284073116|gb|ADB77797.1| 40S ribosomal protein S9 [Chlamydomonas reinhardtii] Length = 178 Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E + D+ + FLE RL T+V++ +I AR + RH+ Sbjct: 85 YGLLNESQ--------DKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158 >gi|302853414|ref|XP_002958222.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] gi|300256410|gb|EFJ40676.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] Length = 190 Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG +SE + D+ + FLE RL T+V++ +I AR + RH+ Sbjct: 85 YGLLSESQ--------DKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158 >gi|322488438|emb|CBZ23684.1| putative 40S ribosomal protein S9 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 189 Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|294337214|emb|CAQ52756.1| ribosomal protein S4 [Neckera pennata] gi|301154072|emb|CAR31434.1| ribosomal protein S4 protein [Forsstroemia producta] gi|303228139|emb|CAR65289.1| ribosomal protein S4 protein [Neckera hymenodonta] Length = 46 Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 12/31 (38%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31 MS+ + +I RR+G K S Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKISQLKSS 31 >gi|294337136|emb|CAQ52718.1| ribosomal protein S4 [Herpetineuron toccoae] Length = 46 Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT 29 MS+ + +I RR+G K+P Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTPQLK 29 >gi|212544526|ref|XP_002152417.1| 40S ribosomal protein S9 [Penicillium marneffei ATCC 18224] gi|210065386|gb|EEA19480.1| 40S ribosomal protein S9 [Penicillium marneffei ATCC 18224] Length = 191 Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ SY + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSYMVR 149 >gi|169780348|ref|XP_001824638.1| 40S ribosomal protein S9 [Aspergillus oryzae RIB40] gi|238505532|ref|XP_002383988.1| 40S ribosomal protein S9 [Aspergillus flavus NRRL3357] gi|83773378|dbj|BAE63505.1| unnamed protein product [Aspergillus oryzae] gi|220690102|gb|EED46452.1| 40S ribosomal protein S9 [Aspergillus flavus NRRL3357] Length = 193 Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFMVR 149 >gi|224142783|ref|XP_002324730.1| predicted protein [Populus trichocarpa] gi|118483013|gb|ABK93418.1| unknown [Populus trichocarpa] gi|118487957|gb|ABK95800.1| unknown [Populus trichocarpa] gi|118489692|gb|ABK96647.1| unknown [Populus trichocarpa x Populus deltoides] gi|222866164|gb|EEF03295.1| predicted protein [Populus trichocarpa] Length = 197 Score = 42.6 bits (99), Expect = 0.032, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++A +I AR + RH+ Sbjct: 85 YGLLEESQ--------NKLDYVLALTVENFLERRLQTLVFKAGMAKSIHHARVLIKQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQVVNIPSFMVRVDSQKHI 158 >gi|312094117|ref|XP_003147914.1| 40S ribosomal protein S9 [Loa loa] gi|307756920|gb|EFO16154.1| 40S ribosomal protein S9 [Loa loa] Length = 192 Score = 42.6 bits (99), Expect = 0.032, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G G R K + L +K + + EK R +F+ Sbjct: 21 KERLDQELKLIGEFGLRNKREVWRVKYTLAKIRKAARTLLTLEEKDPRRLFEGNALLRRL 80 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + +H+ V + Sbjct: 81 VRIGVLSEDRMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRRQI 140 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + K Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162 >gi|261332601|emb|CBH15596.1| 40S ribosomal protein S9, putative [Trypanosoma brucei gambiense DAL972] Length = 203 Score = 42.6 bits (99), Expect = 0.032, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 K ++ G +G R K + + L ++ + + E R + + + R Sbjct: 33 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 92 Query: 84 TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + LE RL T+V++ ++ +R + RH+ V + Sbjct: 93 HGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQI 152 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 153 VTIPSFIVRVSSEHHI 168 >gi|90819966|gb|ABD98740.1| putative S9e ribosomal protein [Graphocephala atropunctata] Length = 193 Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF--------- 74 K+ ++ G +G R K + L +K + + EK R +F Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDQRRLFNGNALLRRL 82 Query: 75 -------KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDENRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|242812657|ref|XP_002486003.1| 40S ribosomal protein S9 [Talaromyces stipitatus ATCC 10500] gi|218714342|gb|EED13765.1| 40S ribosomal protein S9 [Talaromyces stipitatus ATCC 10500] Length = 192 Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ SY + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSYMVR 149 >gi|57231021|gb|AAW47271.1| ribosomal protein S4 [Eichhornia crassipes] Length = 311 Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 43 SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102 + ++ + +K+ +YGD+ ++ + + E+R D I R Sbjct: 43 RENRNSNIKSQTTRKLPLFYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVR 96 Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 F T+ ARQ ++HR V VN V+I ++ GD I + Sbjct: 97 LHFSDTLPQARQPISHRRVCVNNGLVSITHFQVSHGDQISFHEN 140 >gi|37784200|gb|AAP44421.1| 40S ribosomal protein S9 [Lactuca saligna] Length = 124 Score = 42.6 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++ +I AR + RH+ Sbjct: 16 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIKQRHI 67 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 68 RVGRQVVNVPSFMVRVDSQKHI 89 >gi|71747500|ref|XP_822805.1| 40S ribosomal protein S9 [Trypanosoma brucei TREU927] gi|72392295|ref|XP_846948.1| 40S ribosomal protein S9 [Trypanosoma brucei TREU927] gi|140207|sp|P17959|RS9_TRYBB RecName: Full=Probable 40S ribosomal protein S9 gi|10399|emb|CAA36818.1| unnamed protein product [Trypanosoma brucei] gi|62176199|gb|AAX70315.1| 40S ribosomal protein S9, putative [Trypanosoma brucei] gi|70802978|gb|AAZ12882.1| 40S ribosomal protein S9, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|70832473|gb|EAN77977.1| 40S ribosomal protein S9, putative [Trypanosoma brucei] gi|261330133|emb|CBH13117.1| 40S ribosomal protein S9, putative [Trypanosoma brucei gambiense DAL972] Length = 190 Score = 42.6 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 K ++ G +G R K + + L ++ + + E R + + + R Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 84 TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + LE RL T+V++ ++ +R + RH+ V + Sbjct: 80 HGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSEHHI 155 >gi|329350656|gb|AEB91336.1| ribosomal protein S4 [Hypacanthium evidens] Length = 45 Score = 42.6 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|322490706|emb|CBZ25968.1| putative 40S ribosomal protein S9 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 189 Score = 42.6 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + + L ++ + + E R + + Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E D+ S + LE RL TIV++A ++ AR + RH+ V + Sbjct: 80 HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSERHI 155 >gi|170578608|ref|XP_001894478.1| 40S ribosomal protein S9 [Brugia malayi] gi|158598917|gb|EDP36682.1| 40S ribosomal protein S9, putative [Brugia malayi] Length = 192 Score = 42.6 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G G R K + L +K + + EK R +F+ Sbjct: 21 KERLDQELKLIGEFGLRNKREVWRVKYTLAKIRKAARTLLTLEEKDPRRLFEGNALLRRL 80 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + +H+ V + Sbjct: 81 VRIGVLSEDRMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRRQI 140 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + K Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162 >gi|313219379|emb|CBY16469.1| unnamed protein product [Oikopleura dioica] Length = 100 Score = 42.6 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ +I AR + RH+ V + VN+ SY + Sbjct: 2 KLDHVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNVPSYVVRLD 61 Query: 139 DVIEVKQKSKQ 149 + + Sbjct: 62 SQKHIDFSLRS 72 >gi|37784188|gb|AAP44415.1| 40S ribosomal protein S9 [Lactuca sativa] gi|37784190|gb|AAP44416.1| 40S ribosomal protein S9 [Lactuca sativa] gi|37784192|gb|AAP44417.1| 40S ribosomal protein S9 [Lactuca sativa] gi|37784194|gb|AAP44418.1| 40S ribosomal protein S9 [Lactuca serriola] gi|37784196|gb|AAP44419.1| 40S ribosomal protein S9 [Lactuca saligna] gi|37784198|gb|AAP44420.1| 40S ribosomal protein S9 [Lactuca saligna] Length = 143 Score = 42.6 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++ +I AR + RH+ Sbjct: 35 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIKQRHI 86 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 87 RVGRQVVNVPSFMVRVDSQKHI 108 >gi|115278556|ref|YP_762343.1| ribosomal protein S4 [Sorghum bicolor] gi|114309677|gb|ABI60894.1| ribosomal protein S4 [Sorghum bicolor] Length = 383 Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K + ++ + +K+ YYGD+ +K + + E+R D I Sbjct: 45 KRENLNSNIKSQTTRKLSLYYGDLPIRKMHRGRERTSYIP------FLLNQETRSDVIPV 98 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 R +F T+ ARQ ++HR V +N V I ++ GD+I K+ Sbjct: 99 RLRFSDTLPQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143 >gi|56809869|gb|AAW31599.1| ribosomal protein S9 [Aedes albopictus] Length = 195 Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78 G +G R K + L +K + + EK R + + Sbjct: 34 GQYGLRNKREVWRVRYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ + AR + RH+ V + VNI S+ + Sbjct: 94 KLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|44969159|gb|AAS49601.1| ribosomal protein S9 [Scyliorhinus canicula] Length = 173 Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI SY + Sbjct: 80 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSYIVR 139 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 140 LDSQKHIDFSLRS 152 >gi|550023|gb|AAA85659.1| ribosomal protein S9 [Homo sapiens] gi|1096943|prf||2113200F ribosomal protein S9 Length = 194 Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163 >gi|60653307|gb|AAX29348.1| ribosomal protein S9 [synthetic construct] Length = 195 Score = 42.6 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163 >gi|326437506|gb|EGD83076.1| 40S ribosomal protein S9 [Salpingoeca sp. ATCC 50818] Length = 194 Score = 42.2 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G +G R K + L L +K + + E R +F+ Sbjct: 27 KERLDQELKLVGEYGLRCKREVYRVKLTLAKIRKAARVLLTLEENDPRRLFEGNALLRRL 86 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 E + + FLE RL T V++ ++ AR + RH+ V + Sbjct: 87 LRIGVLDEEHMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSVHHARVLIRQRHIRVRKQL 146 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + +K Sbjct: 147 VNVPSFTVRVDSAKHIDFSAKS 168 >gi|81176536|ref|YP_398420.1| rps4 [Triticum aestivum] gi|78675260|dbj|BAE47685.1| rps4 [Triticum aestivum] gi|169649069|gb|ACA62630.1| rps4 [Triticum aestivum] Length = 357 Score = 42.2 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 13/147 (8%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 + + ++ + +K+ YYGD+ ++ + + E+R D I Sbjct: 45 RRENRNSNIKSQTTRKLSLYYGDLPIREMHRGRELTSYIP------FLLNQETRSDVIPV 98 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161 R F T+ ARQ ++HR V +N V I + GD+I K+ + Sbjct: 99 RLHFSDTLPQARQPISHRRVCLNNGLVTITHLKVSHGDLISFKENDARTRGFEIRRSF-- 156 Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKD 188 YI ++ ++ F+ S K Sbjct: 157 -----YIDISVGKIIGKFLSAISVGKR 178 >gi|108742528|gb|ABG01900.1| S9 ribosomal protein [Gryllus rubens] Length = 177 Score = 42.2 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 95 RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 154 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 155 LDSQKHIDFSLKS 167 >gi|14141193|ref|NP_001004.2| 40S ribosomal protein S9 [Homo sapiens] gi|33504483|ref|NP_084043.1| 40S ribosomal protein S9 [Mus musculus] gi|110347598|ref|NP_112370.2| 40S ribosomal protein S9 [Rattus norvegicus] gi|155372029|ref|NP_001094622.1| 40S ribosomal protein S9 [Bos taurus] gi|281182503|ref|NP_001162349.1| 40S ribosomal protein S9 [Papio anubis] gi|284005038|ref|NP_001164865.1| 40S ribosomal protein S9 [Oryctolagus cuniculus] gi|73947567|ref|XP_533590.2| PREDICTED: similar to 40S ribosomal protein S9 [Canis familiaris] gi|109126024|ref|XP_001082895.1| PREDICTED: 40S ribosomal protein S9 [Macaca mulatta] gi|114679016|ref|XP_001174947.1| PREDICTED: similar to Ribosomal protein S9 isoform 4 [Pan troglodytes] gi|114679018|ref|XP_001174948.1| PREDICTED: similar to Ribosomal protein S9 isoform 5 [Pan troglodytes] gi|114679020|ref|XP_001174951.1| PREDICTED: similar to Ribosomal protein S9 isoform 6 [Pan troglodytes] gi|114679022|ref|XP_001174953.1| PREDICTED: similar to Ribosomal protein S9 isoform 7 [Pan troglodytes] gi|149722554|ref|XP_001488074.1| PREDICTED: similar to ribosomal protein S9 [Equus caballus] gi|296234591|ref|XP_002762521.1| PREDICTED: 40S ribosomal protein S9-like [Callithrix jacchus] gi|297705863|ref|XP_002829779.1| PREDICTED: 40S ribosomal protein S9-like [Pongo abelii] gi|301785199|ref|XP_002928005.1| PREDICTED: 40S ribosomal protein S9-like [Ailuropoda melanoleuca] gi|20178311|sp|P46781|RS9_HUMAN RecName: Full=40S ribosomal protein S9 gi|52783339|sp|Q6ZWN5|RS9_MOUSE RecName: Full=40S ribosomal protein S9 gi|52788199|sp|P29314|RS9_RAT RecName: Full=40S ribosomal protein S9 gi|182705273|sp|A9L913|RS9_PAPAN RecName: Full=40S ribosomal protein S9 gi|189044386|sp|A6QLG5|RS9_BOVIN RecName: Full=40S ribosomal protein S9 gi|12654005|gb|AAH00802.1| Ribosomal protein S9 [Homo sapiens] gi|13938523|gb|AAH07410.1| Ribosomal protein S9 [Homo sapiens] gi|13938567|gb|AAH07434.1| Ribosomal protein S9 [Homo sapiens] gi|14043812|gb|AAH07857.1| Ribosomal protein S9 [Homo sapiens] gi|17932972|dbj|BAB79477.1| ribosomal protein S9 [Homo sapiens] gi|26341336|dbj|BAC34330.1| unnamed protein product [Mus musculus] gi|26349443|dbj|BAC38361.1| unnamed protein product [Mus musculus] gi|38014582|gb|AAH60560.1| Ribosomal protein S9 [Rattus norvegicus] gi|45786140|gb|AAH68055.1| Ribosomal protein S9 [Homo sapiens] gi|48734872|gb|AAH71940.1| Ribosomal protein S9 [Homo sapiens] gi|60656367|gb|AAX32747.1| ribosomal protein S9 [synthetic construct] gi|67678154|gb|AAH96756.1| Ribosomal protein S9 [Homo sapiens] gi|74178152|dbj|BAE29863.1| unnamed protein product [Mus musculus] gi|74181488|dbj|BAE30013.1| unnamed protein product [Mus musculus] gi|74181562|dbj|BAE30046.1| unnamed protein product [Mus musculus] gi|74196003|dbj|BAE30558.1| unnamed protein product [Mus musculus] gi|119592615|gb|EAW72209.1| ribosomal protein S9, isoform CRA_a [Homo sapiens] gi|119592617|gb|EAW72211.1| ribosomal protein S9, isoform CRA_a [Homo sapiens] gi|123980594|gb|ABM82126.1| ribosomal protein S9 [synthetic construct] gi|123995415|gb|ABM85309.1| ribosomal protein S9 [synthetic construct] gi|148699250|gb|EDL31197.1| mCG18481, isoform CRA_a [Mus musculus] gi|149029793|gb|EDL84925.1| rCG56820 [Rattus norvegicus] gi|151554648|gb|AAI47957.1| RPS9 protein [Bos taurus] gi|151554779|gb|AAI48017.1| RPS9 protein [Bos taurus] gi|159571311|emb|CAP19125.1| ribosomal protein S9 [Homo sapiens] gi|160904191|gb|ABX52176.1| ribosomal protein S9 (predicted) [Papio anubis] gi|167427248|gb|ABZ80228.1| ribosomal protein S9 (predicted) [Callithrix jacchus] gi|169158361|emb|CAQ09597.1| ribosomal protein S9 [Homo sapiens] gi|184185529|gb|ACC68931.1| ribosomal protein S9 (predicted) [Rhinolophus ferrumequinum] gi|190576593|gb|ACE79082.1| ribosomal protein S9 (predicted) [Sorex araneus] gi|197215709|gb|ACH53097.1| ribosomal protein S9 (predicted) [Otolemur garnettii] gi|208967336|dbj|BAG73682.1| ribosomal protein S9 [synthetic construct] gi|217418300|gb|ACK44303.1| ribosomal protein S9 (predicted) [Oryctolagus cuniculus] gi|229368769|gb|ACQ63049.1| ribosomal protein S9 (predicted) [Dasypus novemcinctus] gi|281354542|gb|EFB30126.1| hypothetical protein PANDA_017891 [Ailuropoda melanoleuca] gi|296477219|gb|DAA19334.1| 40S ribosomal protein S9 [Bos taurus] Length = 194 Score = 42.2 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163 >gi|322227675|gb|ADW95299.1| ribosomal protein S4 [Allium roseum] gi|322227677|gb|ADW95300.1| ribosomal protein S4 [Allium roseum] gi|322227679|gb|ADW95301.1| ribosomal protein S4 [Allium roseum] Length = 28 Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRP 26 >gi|307202013|gb|EFN81577.1| 40S ribosomal protein S9 [Harpegnathos saltator] Length = 193 Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 29/71 (40%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 94 KLDYVLGLKIEDFLERRLQTQVFKMGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|62083481|gb|AAX62465.1| ribosomal protein S9 [Lysiphlebus testaceipes] gi|62083483|gb|AAX62466.1| ribosomal protein S9 variant 1 [Lysiphlebus testaceipes] Length = 194 Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK+ + +F+ Sbjct: 23 KARLDQELKVIGEYGLRNKREVWRVKYTLAKIRKAARELLTLDEKEPKRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|21594169|gb|AAH31746.1| Ribosomal protein S9 [Mus musculus] Length = 194 Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 142 VNIPSFIVR 150 >gi|307182078|gb|EFN69456.1| 40S ribosomal protein S9 [Camponotus floridanus] gi|322799909|gb|EFZ21050.1| hypothetical protein SINV_10506 [Solenopsis invicta] gi|332017469|gb|EGI58192.1| 40S ribosomal protein S9 [Acromyrmex echinatior] Length = 193 Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 29/71 (40%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 94 KLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|213510684|dbj|BAG84561.1| ribosomal protein S4 [Gentiana thunbergii] gi|213510686|dbj|BAG84562.1| ribosomal protein S4 [Gentiana thunbergii] gi|213510688|dbj|BAG84563.1| ribosomal protein S4 [Gentiana thunbergii] gi|213510690|dbj|BAG84564.1| ribosomal protein S4 [Gentiana thunbergii] gi|213510692|dbj|BAG84565.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488789|dbj|BAJ05251.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488791|dbj|BAJ05252.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488793|dbj|BAJ05253.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488795|dbj|BAJ05254.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488797|dbj|BAJ05255.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488799|dbj|BAJ05256.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488801|dbj|BAJ05257.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488803|dbj|BAJ05258.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488805|dbj|BAJ05259.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488807|dbj|BAJ05260.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488809|dbj|BAJ05261.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488811|dbj|BAJ05262.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488813|dbj|BAJ05263.1| ribosomal protein S4 [Gentiana thunbergii] gi|294488815|dbj|BAJ05264.1| ribosomal protein S4 [Gentiana zollingeri] Length = 33 Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 3/33 (9%) Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 +I S + + LVVE+YSR Sbjct: 2 QYKGLVNQIIDSK---WVGLKINELLVVEYYSR 31 >gi|193580101|ref|XP_001945527.1| PREDICTED: 40S ribosomal protein S9-like [Acyrthosiphon pisum] Length = 197 Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 9/106 (8%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKE------ADRSRGDTSHNLISFLESRLDTIVYRA 103 L L K + + + G+ R + + + + FLE RL T V++ Sbjct: 62 LTLEEKDQKRLFEGNAL---LRRLVRIGVLDEGRMKLDYVLGLKIEDFLERRLQTQVFKL 118 Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 +I AR + RH+ V + VN+ S+ + + K Sbjct: 119 GLAKSIHHARVLIRQRHIRVRKQVVNVPSFIVRLDSQKHIDFSLKS 164 >gi|55661270|ref|XP_515154.1| PREDICTED: similar to Ribosomal protein S9 isoform 2 [Pan troglodytes] Length = 194 Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 142 VNIPSFIVR 150 >gi|125977176|ref|XP_001352621.1| GA28351 [Drosophila pseudoobscura pseudoobscura] gi|195168054|ref|XP_002024847.1| GL17960 [Drosophila persimilis] gi|195178296|ref|XP_002029028.1| GL20135 [Drosophila persimilis] gi|195191346|ref|XP_002029552.1| GL21280 [Drosophila persimilis] gi|54641369|gb|EAL30119.1| GA28351 [Drosophila pseudoobscura pseudoobscura] gi|194103695|gb|EDW25738.1| GL21280 [Drosophila persimilis] gi|194108277|gb|EDW30320.1| GL17960 [Drosophila persimilis] gi|194117383|gb|EDW39426.1| GL20135 [Drosophila persimilis] Length = 195 Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|310794041|gb|EFQ29502.1| ribosomal protein S4 [Glomerella graminicola M1.001] Length = 191 Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147 >gi|197127111|gb|ACH43609.1| putative 40S ribosomal protein S9 [Taeniopygia guttata] Length = 194 Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163 >gi|193290618|gb|ACF17617.1| S-9 [Tursiops truncatus] Length = 161 Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 15 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 74 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 75 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 134 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 135 VNIPSFIVRLDSQKHIDFSLRS 156 >gi|91089607|ref|XP_967635.1| PREDICTED: similar to S9e ribosomal protein isoform 1 [Tribolium castaneum] gi|270012619|gb|EFA09067.1| hypothetical protein TcasGA2_TC006782 [Tribolium castaneum] Length = 194 Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK + +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDPKRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDENRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFIVRLDSQKHIDFSLKS 164 >gi|189342370|gb|ACD91764.1| ribosomal protein S4 [Cousinia lepida] Length = 45 Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 11/29 (37%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT 29 MS+ + K RR+G K P Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRXR 29 >gi|156361995|ref|XP_001625568.1| predicted protein [Nematostella vectensis] gi|156212407|gb|EDO33468.1| predicted protein [Nematostella vectensis] Length = 190 Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 16/126 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K +N G +G R K + L L +K + + EK R +F+ Sbjct: 19 KERLNQELKIIGEYGLRNKREVWRVKLTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 78 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 79 VRIGVLDESRMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQL 138 Query: 128 VNIGSY 133 VN+ S+ Sbjct: 139 VNVPSF 144 >gi|126133865|ref|XP_001383457.1| hypothetical protein PICST_77059 [Scheffersomyces stipitis CBS 6054] gi|126095606|gb|ABN65428.1| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 189 Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 8/87 (9%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G +SE K + + A R FLE RL T V++ +I AR + RH+ Sbjct: 84 GVLSEDKMKLDYVLALRIED--------FLERRLQTQVFKLGLARSIHHARVLITQRHIA 135 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 V + VNI S+ + + Sbjct: 136 VGKQIVNIPSFTVRLDSQKHIDFAHNS 162 >gi|67537266|ref|XP_662407.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Aspergillus nidulans FGSC A4] gi|40741183|gb|EAA60373.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Aspergillus nidulans FGSC A4] gi|259482350|tpe|CBF76749.1| TPA: hypothetical protein similar to 40S ribosomal protein S9 (Broad) [Aspergillus nidulans FGSC A4] Length = 193 Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ SY + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149 >gi|320168060|gb|EFW44959.1| S9 ribosomal protein [Capsaspora owczarzaki ATCC 30864] Length = 193 Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 R + FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 93 RMRLDFVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 149 >gi|299469776|emb|CBN76630.1| conserved unknown protein [Ectocarpus siliculosus] Length = 194 Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE RL T V++ +I AR + HRH+ V + VN+ + + + Sbjct: 105 KMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHI 158 >gi|255626239|gb|ACU13464.1| unknown [Glycine max] Length = 197 Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E + ++ + + +FLE RL T+V+++ +I AR + R Sbjct: 83 FRYGLLDETQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQR 134 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143 H+ V + VNI S+ + + Sbjct: 135 HIRVGRQVVNIPSFMVRVDSQKHI 158 >gi|119192000|ref|XP_001246606.1| 40S ribosomal protein S9 [Coccidioides immitis RS] gi|303313185|ref|XP_003066604.1| 40S ribosomal protein S9, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106266|gb|EER24459.1| 40S ribosomal protein S9, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036503|gb|EFW18442.1| 40S ribosomal protein S9 [Coccidioides posadasii str. Silveira] Length = 190 Score = 42.2 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 3/112 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDT 84 N R + + + L L K + + G+ ++ + + + Sbjct: 36 NKREVWRVQLTLSKIRRAARELLTLEEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVL 95 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T VYR +I AR + RH+ V + VN+ S+ + Sbjct: 96 ALKVEDFLERRLQTQVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147 >gi|157123910|ref|XP_001653969.1| 40S ribosomal protein S9 [Aedes aegypti] gi|94468470|gb|ABF18084.1| ribosomal protein S4 [Aedes aegypti] gi|108882871|gb|EAT47096.1| 40S ribosomal protein S9 [Aedes aegypti] Length = 195 Score = 42.2 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78 G +G R K + L +K + + EK R + + Sbjct: 34 GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ + AR + RH+ V + VNI S+ + Sbjct: 94 KLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|325188058|emb|CCA22601.1| 40S ribosomal protein S91 putative [Albugo laibachii Nc14] Length = 194 Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 3/111 (2%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85 R + + K + L L AK + + G ++ + +E + Sbjct: 41 KREIWRVQYALSKLRKAARELLTLDAKDPKRLFEGAALLRRLKRYGLLTEEENELDFVLR 100 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 N+ LE RL T V++ +I AR + RH+ V + V++ S+ + Sbjct: 101 LNVQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVR 151 >gi|145234288|ref|XP_001400515.1| 40S ribosomal protein S9 [Aspergillus niger CBS 513.88] gi|134057460|emb|CAK37968.1| unnamed protein product [Aspergillus niger] Length = 193 Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ SY + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149 >gi|119492999|ref|XP_001263755.1| 40S ribosomal protein S9 [Neosartorya fischeri NRRL 181] gi|119411915|gb|EAW21858.1| 40S ribosomal protein S9 [Neosartorya fischeri NRRL 181] Length = 193 Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ SY + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149 >gi|115402469|ref|XP_001217311.1| 40S ribosomal protein S9 [Aspergillus terreus NIH2624] gi|114189157|gb|EAU30857.1| 40S ribosomal protein S9 [Aspergillus terreus NIH2624] Length = 193 Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ SY + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149 >gi|114679028|ref|XP_001174932.1| PREDICTED: similar to Ribosomal protein S9 isoform 2 [Pan troglodytes] gi|119592621|gb|EAW72215.1| ribosomal protein S9, isoform CRA_f [Homo sapiens] Length = 153 Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 50 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 109 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 110 LDSQKHIDFSLRS 122 >gi|312214837|emb|CBX94791.1| similar to 40S ribosomal protein S9 [Leptosphaeria maculans] Length = 192 Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 147 >gi|260817473|ref|XP_002603611.1| hypothetical protein BRAFLDRAFT_126921 [Branchiostoma floridae] gi|229288931|gb|EEN59622.1| hypothetical protein BRAFLDRAFT_126921 [Branchiostoma floridae] Length = 193 Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 K ++ G +G R K + L L +K + + EK R +F+ Sbjct: 20 KERLDQELKLIGEYGLRNKREVWRVKLTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 79 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 80 VRVGVLDEGKMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQL 139 Query: 128 VNIGSYRCKEGDVIEV 143 VNI SY + + Sbjct: 140 VNIPSYVVRVDSQKHI 155 >gi|194747739|ref|XP_001956309.1| GF24655 [Drosophila ananassae] gi|195428917|ref|XP_002062512.1| GK17575 [Drosophila willistoni] gi|190623591|gb|EDV39115.1| GF24655 [Drosophila ananassae] gi|194158597|gb|EDW73498.1| GK17575 [Drosophila willistoni] Length = 195 Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|315047058|ref|XP_003172904.1| 40S ribosomal protein S9 [Arthroderma gypseum CBS 118893] gi|311343290|gb|EFR02493.1| 40S ribosomal protein S9 [Arthroderma gypseum CBS 118893] Length = 191 Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VYR +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144 >gi|152990876|ref|YP_001356598.1| hemolysin A [Nitratiruptor sp. SB155-2] gi|151422737|dbj|BAF70241.1| hemolysin A [Nitratiruptor sp. SB155-2] Length = 234 Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD +Y+ F + A + + V V+G+ V S+ ++G+V + A+ Sbjct: 1 MRLDKYLYQKGFTSSRNKAAELIREGLVSVDGKVVTKPSFELQKGEVSIKAKPYVSRAAY 60 Query: 154 L 154 Sbjct: 61 K 61 >gi|326471518|gb|EGD95527.1| ribosomal protein S9 [Trichophyton tonsurans CBS 112818] gi|326481818|gb|EGE05828.1| ribosomal protein S9 [Trichophyton equinum CBS 127.97] Length = 191 Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VYR +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|296804202|ref|XP_002842953.1| 40S ribosomal protein S9 [Arthroderma otae CBS 113480] gi|238845555|gb|EEQ35217.1| 40S ribosomal protein S9 [Arthroderma otae CBS 113480] Length = 191 Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VYR +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144 >gi|121544013|gb|ABM55670.1| putative ribosomal protein S9 [Maconellicoccus hirsutus] Length = 195 Score = 41.8 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK+ + +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLDEKEPKRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL+T V++ +I AR + RH+ V+ + Sbjct: 83 VRIGVLDENRMKLDYVLGLKIEDFLERRLETQVFKLGLAKSIHHARVLIRQRHIRVHKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + K Sbjct: 143 VNVPSFIVRLDSQKHIDFSLKS 164 >gi|226475658|emb|CAX77878.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] Length = 150 Score = 41.8 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + ++ + + FLE RL T V++ +I AR + RH+ V + VN Sbjct: 44 LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 103 Query: 133 YRCK 136 + + Sbjct: 104 FMVR 107 >gi|255944121|ref|XP_002562828.1| Pc20g02740 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587563|emb|CAP85603.1| Pc20g02740 [Penicillium chrysogenum Wisconsin 54-1255] Length = 190 Score = 41.8 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFMVR 147 >gi|327305937|ref|XP_003237660.1| ribosomal protein S4 [Trichophyton rubrum CBS 118892] gi|326460658|gb|EGD86111.1| ribosomal protein S4 [Trichophyton rubrum CBS 118892] Length = 191 Score = 41.8 bits (97), Expect = 0.051, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VYR +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|255552894|ref|XP_002517490.1| 40S ribosomal protein S9, putative [Ricinus communis] gi|223543501|gb|EEF45032.1| 40S ribosomal protein S9, putative [Ricinus communis] Length = 196 Score = 41.8 bits (97), Expect = 0.051, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 3/118 (2%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85 R + R + L L K + + G+ ++ + ++ + Sbjct: 41 KRELWRVQYALSRIRNAARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLA 100 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + +FLE RL T+V+++ +I AR + RH+ V + VNI S+ + + Sbjct: 101 LTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158 >gi|110671456|gb|ABG81979.1| putative ribosomal protein S9 [Diaphorina citri] Length = 195 Score = 41.8 bits (97), Expect = 0.051, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 16/126 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK+ R +F+ Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEQRRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSY 133 VNI S+ Sbjct: 143 VNIPSF 148 >gi|226475656|emb|CAX77877.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] Length = 150 Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + ++ + + FLE RL T V++ +I AR + RH+ V + VN Sbjct: 44 LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 103 Query: 133 YRCK 136 + + Sbjct: 104 FMVR 107 >gi|209876962|ref|XP_002139923.1| 40S ribosomal protein S9 [Cryptosporidium muris RN66] gi|209555529|gb|EEA05574.1| 40S ribosomal protein S9, putative [Cryptosporidium muris RN66] Length = 189 Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%) Query: 78 DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + H+ V + VN+ S+ + Sbjct: 91 RKLDYVLGLTVNKFLERRLQTRVFKLGLAKSIHHARVLIRQHHIRVGRQIVNVPSFMVR 149 >gi|194468386|ref|ZP_03074372.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23] gi|194453239|gb|EDX42137.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23] Length = 261 Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + + + + RLD +V A F + A+Q + H V +N ++ Y+ D+ Sbjct: 171 KEEWVPIVTTVSSLRLD-VVVAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDL 229 Query: 141 IEVKQKSKQLASVLEASQLAERD 163 I V+ + + +++ Sbjct: 230 ISVRHGGRLRIDMTNGKTKKDKE 252 >gi|147906789|ref|NP_001085809.1| ribosomal protein S9 [Xenopus laevis] gi|49115440|gb|AAH73375.1| MGC80804 protein [Xenopus laevis] Length = 194 Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|148232254|ref|NP_001080124.1| ribosomal protein S9 [Xenopus laevis] gi|27735416|gb|AAH41242.1| Rps9-prov protein [Xenopus laevis] Length = 194 Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|55742356|ref|NP_001006813.1| ribosomal protein S9 [Xenopus (Silurana) tropicalis] gi|50368686|gb|AAH76696.1| ribosomal protein S9 [Xenopus (Silurana) tropicalis] gi|89271985|emb|CAJ83759.1| ribosomal protein S9 [Xenopus (Silurana) tropicalis] Length = 194 Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|302419927|ref|XP_003007794.1| 40S ribosomal protein S9 [Verticillium albo-atrum VaMs.102] gi|261353445|gb|EEY15873.1| 40S ribosomal protein S9 [Verticillium albo-atrum VaMs.102] Length = 191 Score = 41.8 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147 >gi|324518731|gb|ADY47189.1| 40S ribosomal protein S9 [Ascaris suum] gi|324519412|gb|ADY47375.1| 40S ribosomal protein S9 [Ascaris suum] Length = 192 Score = 41.8 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K ++ G G R K + L +K + + EK R +F+ Sbjct: 21 KERLDQELKLIGEFGLRNKREVWRVKYTLAKIRKAARTLLTLEEKDPRRLFEGNALLRRL 80 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + +H+ V + Sbjct: 81 VRIGVLSEDRMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRRQI 140 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + K Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162 >gi|302807245|ref|XP_002985335.1| hypothetical protein SELMODRAFT_157263 [Selaginella moellendorffii] gi|302810984|ref|XP_002987182.1| hypothetical protein SELMODRAFT_235178 [Selaginella moellendorffii] gi|300145079|gb|EFJ11758.1| hypothetical protein SELMODRAFT_235178 [Selaginella moellendorffii] gi|300146798|gb|EFJ13465.1| hypothetical protein SELMODRAFT_157263 [Selaginella moellendorffii] Length = 198 Score = 41.8 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD---RSRGDT 84 N R + R + L L K + + GD ++ + + Sbjct: 40 NKRELWRLQYVLSRIRNAARHLLTLDEKNPRRIFEGDALLRRMHRYGLLEEGQNKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + +FLE RL T+V++A +I AR V RH+ V + VN+ S+ + + Sbjct: 100 ALTVENFLERRLQTLVFKAGMAKSIHHARVLVRQRHIRVGKQMVNVPSFLVRVESQKHI 158 >gi|255073869|ref|XP_002500609.1| predicted protein [Micromonas sp. RCC299] gi|226515872|gb|ACO61867.1| predicted protein [Micromonas sp. RCC299] Length = 194 Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 8/91 (8%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 A + YG + E + D+ + FLE RL TIV++ ++ A Sbjct: 76 EAIMRRMYRYGLLDESQ--------DKLDYVLALTPEIFLERRLQTIVFKLGLAKSVHHA 127 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 R + RH+ V + VNI S+ + + Sbjct: 128 RVLIKQRHIRVGKQIVNIPSFLVRADSQKHI 158 >gi|189202214|ref|XP_001937443.1| 40S ribosomal protein S9 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984542|gb|EDU50030.1| 40S ribosomal protein S9 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 193 Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 102 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 148 >gi|156536971|ref|XP_001608270.1| PREDICTED: similar to S9e ribosomal protein [Nasonia vitripennis] Length = 193 Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 92 RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 151 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 152 LDSQKHIDFSVKS 164 >gi|115744096|ref|XP_791000.2| PREDICTED: similar to Rps9-prov protein [Strongylocentrotus purpuratus] gi|115972878|ref|XP_001177022.1| PREDICTED: similar to Rps9-prov protein [Strongylocentrotus purpuratus] Length = 192 Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI SY + Sbjct: 88 KMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSYIVR 147 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 148 LDSQKHIDFSLRS 160 >gi|255540985|ref|XP_002511557.1| 40S ribosomal protein S9, putative [Ricinus communis] gi|223550672|gb|EEF52159.1| 40S ribosomal protein S9, putative [Ricinus communis] Length = 197 Score = 41.8 bits (97), Expect = 0.055, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V+++ +I AR + RH+ Sbjct: 85 YGLLEESQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQVVNIPSFMVRIDSQKHI 158 >gi|224116676|ref|XP_002317362.1| predicted protein [Populus trichocarpa] gi|118482733|gb|ABK93285.1| unknown [Populus trichocarpa] gi|222860427|gb|EEE97974.1| predicted protein [Populus trichocarpa] Length = 197 Score = 41.8 bits (97), Expect = 0.056, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + SFLE RL T+V++A +I AR + RH+ Sbjct: 85 YGLLEENQ--------NKLDYVLALTVESFLERRLQTLVFKAGMAKSIHHARVLIKQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V ++VNI S+ + + Sbjct: 137 RVGRQAVNIPSFMVRVDSQKHI 158 >gi|119592616|gb|EAW72210.1| ribosomal protein S9, isoform CRA_b [Homo sapiens] Length = 103 Score = 41.8 bits (97), Expect = 0.056, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 2 KLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLD 61 Query: 139 DVIEVKQKSKQ 149 + + Sbjct: 62 SQKHIDFSLRS 72 >gi|302754856|ref|XP_002960852.1| hypothetical protein SELMODRAFT_74302 [Selaginella moellendorffii] gi|302767484|ref|XP_002967162.1| hypothetical protein SELMODRAFT_144850 [Selaginella moellendorffii] gi|300165153|gb|EFJ31761.1| hypothetical protein SELMODRAFT_144850 [Selaginella moellendorffii] gi|300171791|gb|EFJ38391.1| hypothetical protein SELMODRAFT_74302 [Selaginella moellendorffii] Length = 198 Score = 41.8 bits (97), Expect = 0.056, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD---RSRGDT 84 N R + R S L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYVLSRIRNASRHLLTLDEKNPRRIFEGEALLRRMHRYGLLEEGQNKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + +FLE RL T+V++A +I AR V RH+ V + VN+ S+ + + Sbjct: 100 ALTVENFLERRLQTLVFKAGMAKSIHHARVLVRQRHIRVGKQMVNVPSFLVRVESQKHI 158 >gi|254566883|ref|XP_002490552.1| 40S small ribosomal subunit [Pichia pastoris GS115] gi|238030348|emb|CAY68271.1| 40S small ribosomal subunit [Pichia pastoris GS115] gi|328350941|emb|CCA37341.1| 40S ribosomal protein S9-A [Pichia pastoris CBS 7435] Length = 193 Score = 41.8 bits (97), Expect = 0.056, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78 G +G + K + G QL ++ + EK + +F+ E Sbjct: 32 GEYGLKNKKEIYRIGFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRTGILSEEKR 91 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + + FLE RL T V++ +I AR ++ RH+ V + V I S+ + Sbjct: 92 KLDYVLALKVEDFLERRLQTQVFKLGLAKSIHHARVLISQRHIAVGKQIVTIPSFMVRLE 151 Query: 139 DVIEVKQKSKQ 149 + S Sbjct: 152 SQKHIDFASTS 162 >gi|320592633|gb|EFX05063.1| 40S ribosomal protein s9 [Grosmannia clavigera kw1407] Length = 191 Score = 41.8 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T+VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQVVNVPSFIVR 147 >gi|308080984|ref|NP_001183701.1| hypothetical protein LOC100502294 [Zea mays] gi|238014008|gb|ACR38039.1| unknown [Zea mays] Length = 112 Score = 41.8 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FL+ RL TIV++ +I AR + RH+ Sbjct: 4 YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 55 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 56 RVGRQLVNIPSFMVRVESEKHI 77 >gi|300120128|emb|CBK19682.2| unnamed protein product [Blastocystis hominis] gi|300121727|emb|CBK22302.2| unnamed protein product [Blastocystis hominis] gi|300122077|emb|CBK22651.2| unnamed protein product [Blastocystis hominis] gi|300123433|emb|CBK24706.2| unnamed protein product [Blastocystis hominis] gi|300176244|emb|CBK23555.2| unnamed protein product [Blastocystis hominis] Length = 188 Score = 41.8 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%) Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 +E + + ++ RL T V++ +I AR + RH+ V + VN S+ Sbjct: 90 EEEMKLDMILELSTSKLMDRRLQTRVFKLGLAKSIHHARVLIKQRHIRVGQQVVNAPSFM 149 Query: 135 CKEGDVIEVKQKSKQ 149 ++ Sbjct: 150 VHVDSEKHIQFAENS 164 >gi|38047837|gb|AAR09821.1| similar to Drosophila melanogaster RpS9 [Drosophila yakuba] Length = 191 Score = 41.8 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|327282332|ref|XP_003225897.1| PREDICTED: 40S ribosomal protein S9-like [Anolis carolinensis] Length = 194 Score = 41.8 bits (97), Expect = 0.059, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|328899855|gb|AEB54651.1| ribosomal protein S9 [Procambarus clarkii] Length = 198 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + FLE RL T V++ +I AR + H+ V + VN+ S+ + Sbjct: 92 RMKLDYVLGLKPEDFLERRLQTQVFKLGLAKSIHHARVLIKQGHIRVRKQVVNVPSFIVR 151 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 152 LDSQKHIDFSLKS 164 >gi|221132432|ref|XP_002156853.1| PREDICTED: similar to 40S ribosomal protein S9 [Hydra magnipapillata] Length = 190 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + +H+ V + VNI S+ + Sbjct: 88 RMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRKQLVNIPSFIVR 147 >gi|169596444|ref|XP_001791646.1| hypothetical protein SNOG_00985 [Phaeosphaeria nodorum SN15] gi|111071360|gb|EAT92480.1| hypothetical protein SNOG_00985 [Phaeosphaeria nodorum SN15] Length = 192 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 147 >gi|85375453|ref|YP_459515.1| S4 domain-containing protein [Erythrobacter litoralis HTCC2594] gi|84788536|gb|ABC64718.1| S4 domain protein [Erythrobacter litoralis HTCC2594] Length = 103 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 R+D ++ R +F T AAR + H+ NGR V S+ EGD++ V + V Sbjct: 1 MRIDLVLCRLRFFKTRSAARNLIEAGHLRANGRRVVQVSHPVAEGDILTVPLG--KSVVV 58 Query: 154 LEASQLAERDVPE 166 +E L ER P Sbjct: 59 IEILHLPERRGPA 71 >gi|225719318|gb|ACO15505.1| 40S ribosomal protein S9 [Caligus clemensi] Length = 190 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 21/153 (13%) Query: 18 NLWGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 ++ P+ P G +G R K + L +K + + EK R Sbjct: 12 KVFATPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLEEKDPRR 71 Query: 73 IFK----------------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 +F+ + + FLE RL T V++ +I AR + Sbjct: 72 LFEGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 131 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 RH+ V + VN+ S+ + + K Sbjct: 132 RQRHIRVRKQVVNVPSFVVRLDSQKHIDFSLKS 164 >gi|149185282|ref|ZP_01863599.1| S4 domain protein [Erythrobacter sp. SD-21] gi|148831393|gb|EDL49827.1| S4 domain protein [Erythrobacter sp. SD-21] Length = 85 Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 R+D ++ +FV T AAR+ V+ H+ NG V S GDV+ + + + Sbjct: 1 MRIDRLLCTLRFVRTRSAARKLVDQGHIRRNGERVLRPSRDIAVGDVLTLPVG--RHVKL 58 Query: 154 LEASQLAERDVPE 166 +E QL ER P Sbjct: 59 IEVLQLPERRGPP 71 >gi|50404046|gb|AAT76788.1| 40S ribosomal protein S9 [Corbicula fluminea] Length = 192 Score = 41.8 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 25/57 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + FLE RL T V++ +I AR + RH+ V + VNI S+ Sbjct: 90 KMKLDFVLGLRTEDFLERRLQTQVFKLGLAKSIHHARILIRQRHIRVRKQVVNIPSF 146 >gi|6978050|gb|AAF34260.1| truncated ribosomal protein small subunit 4 [Pteridium aquilinum subsp. decompositum] Length = 68 Score = 41.8 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 23/60 (38%) Query: 4 RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63 + K+ RR+ + + Q K S F ++L AKQ+++ YG Sbjct: 5 YRGPRLKLIRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRFNYG 64 >gi|171676139|ref|XP_001903023.1| hypothetical protein [Podospora anserina S mat+] gi|170936135|emb|CAP60795.1| unnamed protein product [Podospora anserina S mat+] Length = 220 Score = 41.4 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T+VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|296423828|ref|XP_002841454.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637694|emb|CAZ85645.1| unnamed protein product [Tuber melanosporum] Length = 195 Score = 41.4 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 105 DFLERRLQTQVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 151 >gi|258515777|ref|YP_003191999.1| hemolysin A [Desulfotomaculum acetoxidans DSM 771] gi|257779482|gb|ACV63376.1| hemolysin A [Desulfotomaculum acetoxidans DSM 771] Length = 269 Score = 41.4 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 RLD + R F P+ AR + + VN + ++ + G +EV+ + Sbjct: 7 RLDNFLVREGFFPSREKARSAIMAGLIYVNDQRMDKAGTQVSSGVQVEVRGNA 59 >gi|242020437|ref|XP_002430661.1| 40S ribosomal protein S9, putative [Pediculus humanus corporis] gi|212515836|gb|EEB17923.1| 40S ribosomal protein S9, putative [Pediculus humanus corporis] Length = 194 Score = 41.4 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDGKRLFEGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIQVRKQV 142 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 143 VNIPSFIVR 151 >gi|255640554|gb|ACU20562.1| unknown [Glycine max] Length = 197 Score = 41.4 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG + E + ++ + + +FLE RL T+V+++ +I AR + R Sbjct: 83 FRYGLLDETQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQR 134 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143 H+ V + VNI S+ + + Sbjct: 135 HIRVGRQVVNIPSFLVRVDSQKHI 158 >gi|50412884|ref|XP_457175.1| DEHA2B04906p [Debaryomyces hansenii CBS767] gi|49652840|emb|CAG85170.1| DEHA2B04906p [Debaryomyces hansenii] Length = 190 Score = 41.4 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78 G +G + K + G QL ++ + EK + +F+ + Sbjct: 32 GEYGLKNKREIYRIGFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRTGVLSEDKM 91 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 92 KLDYVLALQPEDFLERRLQTQVFKLGLARSIHHARVLITQRHIAVGKQIVNVPSFMVRLD 151 Query: 139 DVIEVKQKSKQ 149 + Sbjct: 152 SQKHIDFAHNS 162 >gi|149202304|ref|ZP_01879277.1| RNA-binding S4 [Roseovarius sp. TM1035] gi|149144402|gb|EDM32433.1| RNA-binding S4 [Roseovarius sp. TM1035] Length = 126 Score = 41.4 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + RLD ++ A+F T + + ++ HV VNG V + GDV+ Q ++ Sbjct: 7 KIRLDKWLWHARFFKTRTLSAKEISAGHVRVNGARVTKPAQAVGPGDVLTFAQATRVWVV 66 Query: 153 VLEASQLAERDVPE 166 + A PE Sbjct: 67 RIAALGTRRGPAPE 80 >gi|57231023|gb|AAW47272.1| ribosomal protein S4 [Laurus nobilis] Length = 311 Score = 41.4 bits (96), Expect = 0.067, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 23/171 (13%) Query: 22 RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81 K + + Y + ++ + +K+ ++GD+ + + Sbjct: 27 NKKRSIKRKIYP---------RQNLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIP 77 Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 E+R D I R F TI ARQ ++HR V VN V+I + GD+I Sbjct: 78 ------FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLI 131 Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF-VRIPSSLKDVPY 191 ++ + YI ++ + + F VR+ K + Sbjct: 132 SFQENYARTCGEEIRRSF-------YIDISVEKRIGKFLVRMWRRTKTEWF 175 >gi|108742520|gb|ABG01896.1| S9 ribosomal protein [Gryllus firmus] gi|108742522|gb|ABG01897.1| S9 ribosomal protein [Gryllus bimaculatus] gi|108742524|gb|ABG01898.1| S9 ribosomal protein [Gryllus veletis] gi|108742526|gb|ABG01899.1| S9 ribosomal protein [Gryllus pennsylvanicus] Length = 184 Score = 41.4 bits (96), Expect = 0.067, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 95 RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 154 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 155 LDSQKHIDFSLKS 167 >gi|119580810|gb|EAW60406.1| hCG41114, isoform CRA_c [Homo sapiens] Length = 194 Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH V + VNI S+ + Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 150 >gi|327239250|gb|AEA39492.1| ribosomal protein S9 [Ailuropoda melanoleuca] gi|327239342|gb|AEA39538.1| ribosomal protein S9 [Ailuropoda melanoleuca] Length = 194 Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ + + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRIRKQV 141 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163 >gi|294337265|emb|CAQ52781.1| ribosomal protein S4 [Symphyodon imbricatifolius] Length = 46 Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 12/29 (41%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNT 29 MS+ + +I RR+G K+ Sbjct: 1 MSRYRGPRVRIIRRLGTLPGLTNKTSQLK 29 >gi|188572472|gb|ACD65142.1| putative 40S ribosomal protein RPS9 [Phoronis muelleri] Length = 191 Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + L FLE RL T V++ +I AR + RH+ V + VNI SY + Sbjct: 90 KMKLDYVLGLRLEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSYVVR 149 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 150 LDSQKHIDFSLKS 162 >gi|44967688|gb|AAS49576.1| ribosomal protein S9 [Protopterus dolloi] Length = 174 Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 80 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 139 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 140 LDSQKHIDFSLRS 152 >gi|49258824|pdb|1S1H|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is In File 1s1i Length = 179 Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VNI S+ + Sbjct: 85 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 131 >gi|215259451|gb|ACJ64217.1| ribosomal protein S4 [Culex tarsalis] Length = 140 Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 3/103 (2%) Query: 50 LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 L L K + + + G+ ++ + + + + FLE RL T V++ Sbjct: 7 LTLEEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIDDFLERRLQTQVFKLGLA 66 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + AR + RH+ V + VNI S+ + + K Sbjct: 67 KSYHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLKS 109 >gi|124300803|dbj|BAF45897.1| ribosomal protein S9 [Solea senegalensis] Length = 194 Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIPHARVLIRQRHIRVRKQVVNIPSFVVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|71657652|ref|XP_817338.1| 40S ribosomal protein S9 [Trypanosoma cruzi strain CL Brener] gi|70882523|gb|EAN95487.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi] Length = 190 Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 10/95 (10%) Query: 51 QLRAKQKMKKY--YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108 QL M++ YG + E E D+ S + LE RL T+V++ + Sbjct: 69 QLEGSAIMRRCHDYGFLEE--------EKDKLDYVLSLTVPDILERRLQTVVFKHGLAKS 120 Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + AR + RH+ V + V I S+ + + Sbjct: 121 VHHARVLILQRHIAVAKQIVTIPSFIVRVSSEHHI 155 >gi|218192116|gb|EEC74543.1| hypothetical protein OsI_10067 [Oryza sativa Indica Group] Length = 292 Score = 41.4 bits (96), Expect = 0.070, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 9/121 (7%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88 R + R + L L K + + G E R + + + G + Sbjct: 138 KRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEG---EALLRRMNRYGLLADGQNKLDY 194 Query: 89 I------SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 + +FL RL T+V++A +I AR + RH+ V + VNI S+ + Sbjct: 195 VLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKH 254 Query: 143 V 143 + Sbjct: 255 I 255 >gi|322696803|gb|EFY88590.1| 40S ribosomal protein S9 [Metarhizium acridum CQMa 102] Length = 191 Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78 G +G R K + GL L ++ + + EK + +F+ Sbjct: 30 GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 89 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + L FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 90 KLDYVLALKLEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147 >gi|145350813|ref|XP_001419792.1| Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gi|144580024|gb|ABO98085.1| Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] Length = 194 Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 8/91 (8%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 A + + YG + E + D+ + FLE RL T+V++ ++ A Sbjct: 76 EAIMRRMRNYGLLDETQ--------DKLDYVLALGPEQFLERRLQTLVFKLGLAKSVHHA 127 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 R + RH+ V + VN+ S+ + + Sbjct: 128 RVLIRQRHIRVGKQIVNVPSFLVRTDSQKHI 158 >gi|320531524|ref|ZP_08032476.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp. oral taxon 171 str. F0337] gi|320136263|gb|EFW28259.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp. oral taxon 171 str. F0337] Length = 290 Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 R+D+ + R + A + HV ++G+ V + + IE+ S Sbjct: 5 IRIDSELVRRGLARSRTHAATLITDGHVTLDGQVVTKPARQVDPAQAIEILVPS 58 >gi|168003592|ref|XP_001754496.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694117|gb|EDQ80466.1| predicted protein [Physcomitrella patens subsp. patens] Length = 198 Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 3/112 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDESQCKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + +FLE RL T+V+++ +I AR + RH+ V + V++ S+ + Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVR 151 >gi|121704904|ref|XP_001270715.1| 40S ribosomal protein S9 [Aspergillus clavatus NRRL 1] gi|119398861|gb|EAW09289.1| 40S ribosomal protein S9 [Aspergillus clavatus NRRL 1] Length = 193 Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFMVR 149 >gi|49524072|emb|CAG47084.1| 40S ribosomal protein S9 [Catharanthus roseus] Length = 197 Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V+++ +I AR + RH+ Sbjct: 85 YGLLDEGQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158 >gi|293342473|ref|XP_002725244.1| PREDICTED: ribosomal protein S9-like [Rattus norvegicus] Length = 190 Score = 41.4 bits (96), Expect = 0.072, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 87 KMKLDFILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVLKQVVNIPSFIVR 146 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 147 LDSQKHIDFSLRS 159 >gi|225425738|ref|XP_002276284.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086394|emb|CBI31983.3| unnamed protein product [Vitis vinifera] Length = 197 Score = 41.4 bits (96), Expect = 0.072, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V+++ +I AR + RH+ Sbjct: 85 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQVVNIPSFMVRVESQKHI 158 >gi|94502571|ref|YP_588274.1| ribosomal protein S4 [Zea mays subsp. mays] gi|114151588|ref|YP_740375.1| ribosomal protein S4 [Zea perennis] gi|114151655|ref|YP_740407.1| ribosomal protein S4 [Zea mays subsp. parviglumis] gi|40795010|gb|AAR91054.1| ribosomal protein S4 [Zea mays] gi|93116061|gb|ABE98694.1| ribosomal protein S4 [Zea mays subsp. mays] gi|93116105|gb|ABE98737.1| ribosomal protein S4 [Zea mays subsp. mays] gi|93116154|gb|ABE98785.1| ribosomal protein S4 [Zea mays subsp. mays] gi|102567922|gb|ABF70839.1| ribosomal protein S4 [Zea perennis] gi|102567988|gb|ABF70872.1| ribosomal protein S4 [Zea mays subsp. parviglumis] gi|102579654|gb|ABF70934.1| ribosomal protein S4 [Zea mays subsp. mays] Length = 358 Score = 41.4 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++ + +K+ YYGD+ ++ + + E+R D I R +F T+ Sbjct: 53 IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLRFSDTL 106 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V +N V I ++ GD+I K+ Sbjct: 107 PQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143 >gi|198437698|ref|XP_002119409.1| PREDICTED: similar to ribosomal protein S9 isoform 2 [Ciona intestinalis] gi|198437700|ref|XP_002119360.1| PREDICTED: similar to ribosomal protein S9 isoform 1 [Ciona intestinalis] gi|198437704|ref|XP_002119507.1| PREDICTED: similar to ribosomal protein S9 isoform 3 [Ciona intestinalis] Length = 191 Score = 41.4 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 3/103 (2%) Query: 50 LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 L L K + + G+ ++ + + + + FLE RL T V++ Sbjct: 61 LTLDEKNTRRLFEGNALLRRLVRIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLA 120 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 +I AR + RH+ V + VNI S+ + + + Sbjct: 121 KSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163 >gi|322709543|gb|EFZ01119.1| 40S ribosomal protein S9 (S7) [Metarhizium anisopliae ARSEF 23] Length = 204 Score = 41.4 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78 G +G R K + GL L ++ + + EK + +F+ Sbjct: 43 GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 102 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + L FLE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 103 KLDYVLALKLEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 160 >gi|226474510|emb|CAX71741.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226474512|emb|CAX71742.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475654|emb|CAX77876.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475660|emb|CAX77879.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475662|emb|CAX77880.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475664|emb|CAX77881.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475666|emb|CAX77882.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475668|emb|CAX77883.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475670|emb|CAX77884.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475672|emb|CAX77885.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475674|emb|CAX77886.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475676|emb|CAX77887.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475678|emb|CAX77888.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475680|emb|CAX77889.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475682|emb|CAX77890.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475684|emb|CAX77891.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475686|emb|CAX77892.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] gi|226475688|emb|CAX77893.1| putative 40S ribosomal protein S9 [Schistosoma japonicum] Length = 192 Score = 41.4 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + ++ + + FLE RL T V++ +I AR + RH+ V + VN Sbjct: 86 LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 145 Query: 133 YRCK 136 + + Sbjct: 146 FMVR 149 >gi|227544869|ref|ZP_03974918.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A] gi|300909911|ref|ZP_07127371.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112] gi|227185143|gb|EEI65214.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A] gi|300892559|gb|EFK85919.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112] Length = 261 Score = 41.4 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + + + + RLD +V A F + A+Q + H V +N ++ Y+ D+ Sbjct: 171 KEEWVPIVTTVSSLRLD-VVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDL 229 Query: 141 IEVKQKSKQLASVLEASQLAERD 163 I V+ + + +++ Sbjct: 230 ISVRHGGRLRIDMTNGKTKKDKE 252 >gi|255965449|gb|ACU45029.1| ribosomal protein S9 [Pfiesteria piscicida] Length = 186 Score = 41.4 bits (96), Expect = 0.078, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL + V++ +I AR + RH+ V + VN+ S+ + Sbjct: 88 KLDYVLGLKVNDFLERRLQSQVFKLGLAKSIHHARVLILQRHIRVGRQIVNVPSFLVRVD 147 Query: 139 DVIEV 143 + Sbjct: 148 SQKHI 152 >gi|114151620|ref|YP_740450.1| ribosomal protein S4 [Zea luxurians] gi|110287616|gb|ABG65662.1| ribosomal protein S4 [Zea luxurians] Length = 358 Score = 41.4 bits (96), Expect = 0.078, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++ + +K+ YYGD+ ++ + + E+R D I R +F T+ Sbjct: 53 IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLRFSDTL 106 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V +N V I ++ GD+I K+ Sbjct: 107 PQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143 >gi|149210501|ref|XP_001522625.1| hypothetical protein MGCH7_ch7g725 [Magnaporthe oryzae 70-15] gi|86196680|gb|EAQ71318.1| hypothetical protein MGCH7_ch7g725 [Magnaporthe oryzae 70-15] Length = 180 Score = 41.4 bits (96), Expect = 0.078, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 3/110 (2%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGD 83 N R + + + L L K + + G+ ++ + + + Sbjct: 24 KNKREVWRVQLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYV 83 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + + FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 84 LALKVEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 133 >gi|83595157|gb|ABC25036.1| ribosomal protein S9 [Hydra vulgaris] Length = 116 Score = 41.4 bits (96), Expect = 0.079, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V + +I AR + +H+ V + VNI S+ + Sbjct: 14 RMKLDYVLGLKVEDFLERRLQTQVLKLGLAKSIHHARVLIRQKHIRVRKQLVNIPSFIVR 73 >gi|225713680|gb|ACO12686.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis] gi|290463001|gb|ADD24548.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis] gi|290562337|gb|ADD38565.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis] Length = 190 Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 21/153 (13%) Query: 18 NLWGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 ++ P+ P G +G R K + L +K + + EK R Sbjct: 12 KVFATPRRPFEKTRLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAARDLLTLEEKDPRR 71 Query: 73 IFKEAD----------------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 +F+ + + FLE RL T V++ +I AR + Sbjct: 72 LFEGNALLRRLVRVGVLDESHMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLI 131 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 RH+ V + VN+ S+ + + K Sbjct: 132 RQRHIRVRKQVVNVPSFVVRLDSQKHIDFSLKS 164 >gi|156056563|ref|XP_001594205.1| 40S ribosomal protein S9 [Sclerotinia sclerotiorum 1980] gi|154701798|gb|EDO01537.1| 40S ribosomal protein S9 [Sclerotinia sclerotiorum 1980 UF-70] Length = 191 Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 3/109 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDT 84 N R + + + L L K + + G+ ++ + + + Sbjct: 36 NKREVWRVQLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDEARMKLDYVL 95 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + + F+E RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 96 ALKIEDFMERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|27665858|ref|XP_213106.1| PREDICTED: ribosomal protein S9-like [Rattus norvegicus] gi|109512423|ref|XP_001056883.1| PREDICTED: ribosomal protein S9-like [Rattus norvegicus] Length = 194 Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ + +I A + RH+ V + Sbjct: 82 VRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCK 136 VNI S+ Sbjct: 142 VNIPSFIVC 150 >gi|195127033|ref|XP_002007973.1| GI12083 [Drosophila mojavensis] gi|193919582|gb|EDW18449.1| GI12083 [Drosophila mojavensis] Length = 195 Score = 41.4 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLEEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|115278626|ref|YP_762497.1| ribosomal protein S4 [Tripsacum dactyloides] gi|114432117|gb|ABI74666.1| ribosomal protein S4 [Tripsacum dactyloides] Length = 356 Score = 41.4 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++ + +K+ YYGD+ ++ + + E+R D I R +F T+ Sbjct: 53 IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLRFSDTL 106 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V +N V I ++ GD+I K+ Sbjct: 107 PQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143 >gi|192913000|gb|ACF06608.1| ribosomal protein [Elaeis guineensis] Length = 197 Score = 41.4 bits (96), Expect = 0.082, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V+++ +I AR + RH+ Sbjct: 85 YGLLDENQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQVVNIPSFLVRVDSAKHI 158 >gi|85112053|ref|XP_964233.1| 40S ribosomal protein S9 [Neurospora crassa OR74A] gi|28926006|gb|EAA34997.1| 40S ribosomal protein S9 [Neurospora crassa OR74A] gi|88866507|gb|ABD57302.1| unknown [Neurospora crassa] Length = 190 Score = 41.4 bits (96), Expect = 0.082, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|289616625|emb|CBI56575.1| unnamed protein product [Sordaria macrospora] Length = 190 Score = 41.1 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|146403788|gb|ABQ32300.1| putative 40S ribosomal protein S9 [Artemisia annua] Length = 197 Score = 41.1 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++ +I AR + RH+ Sbjct: 85 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIKQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGRQVVNVPSFMVRVDSQKHI 158 >gi|148543830|ref|YP_001271200.1| RNA-binding S4 domain-containing protein [Lactobacillus reuteri DSM 20016] gi|184153231|ref|YP_001841572.1| hypothetical protein LAR_0576 [Lactobacillus reuteri JCM 1112] gi|227364734|ref|ZP_03848783.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3] gi|325682639|ref|ZP_08162156.1| S4 domain protein [Lactobacillus reuteri MM4-1A] gi|148530864|gb|ABQ82863.1| RNA-binding S4 domain protein [Lactobacillus reuteri DSM 20016] gi|183224575|dbj|BAG25092.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227070193|gb|EEI08567.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3] gi|324978478|gb|EGC15428.1| S4 domain protein [Lactobacillus reuteri MM4-1A] Length = 261 Score = 41.1 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + + + + RLD +V A F + A+Q + H V +N ++ Y+ D+ Sbjct: 171 KEEWVPIVTTVSSLRLD-VVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDL 229 Query: 141 IEVKQKSKQLASVLEASQLAERD 163 I V+ + + +++ Sbjct: 230 ISVRHGGRLRIDMTNGKTKKDKE 252 >gi|194462968|gb|ACF72878.1| ribosomal protein S9 [Ochlerotatus taeniorhynchus] Length = 195 Score = 41.1 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78 G +G R K + L +K + + EK R + + Sbjct: 34 GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ + AR + RH+ V + VNI S+ + Sbjct: 94 KLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFVVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|6325176|ref|NP_015244.1| Rps9ap [Saccharomyces cerevisiae S288c] gi|6094198|sp|O13516|RS9A_YEAST RecName: Full=40S ribosomal protein S9-A; AltName: Full=RP21; AltName: Full=S13; AltName: Full=YP28; AltName: Full=YS11 gi|313103667|pdb|3IZB|C Chain C, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome gi|315113452|pdb|3O2Z|E Chain E, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. gi|315113480|pdb|3O30|E Chain E, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. gi|218515|dbj|BAA00626.1| YS11 [Saccharomyces cerevisiae] gi|2347168|gb|AAB68268.1| Ypl081wp [Saccharomyces cerevisiae] gi|151942716|gb|EDN61062.1| ribosomal protein S9A [Saccharomyces cerevisiae YJM789] gi|259150077|emb|CAY86880.1| Rps9ap [Saccharomyces cerevisiae EC1118] gi|285815460|tpg|DAA11352.1| TPA: Rps9ap [Saccharomyces cerevisiae S288c] Length = 197 Score = 41.1 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VNI S+ + Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149 >gi|71414539|ref|XP_809368.1| 40S ribosomal protein S9 [Trypanosoma cruzi strain CL Brener] gi|71659082|ref|XP_821266.1| 40S ribosomal protein S9 [Trypanosoma cruzi strain CL Brener] gi|70873739|gb|EAN87517.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi] gi|70886640|gb|EAN99415.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi] Length = 190 Score = 41.1 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 16/136 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS----------- 72 K ++ G +G R K + + L ++ + + E R Sbjct: 20 KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRQLEGSAIMRRC 79 Query: 73 -----IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + +E D+ S + LE RL T+V++ ++ AR + RH+ V + Sbjct: 80 HDYGFLEEEKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHARVLILQRHIAVAKQI 139 Query: 128 VNIGSYRCKEGDVIEV 143 V I S+ + + Sbjct: 140 VTIPSFIVRVSSEHHI 155 >gi|44967635|gb|AAS49575.1| ribosomal protein S9 [Latimeria chalumnae] Length = 166 Score = 41.1 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 75 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 134 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 135 LDSQKHIYFSLRS 147 >gi|1710780|sp|P52810|RS9_PODAN RecName: Full=40S ribosomal protein S9; AltName: Full=S7 gi|1321917|emb|CAA65433.1| cytoplasmic ribosomal protein S7 [Podospora anserina] Length = 190 Score = 41.1 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T+VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|320580778|gb|EFW95000.1| 40S ribosomal protein S9-B [Pichia angusta DL-1] Length = 365 Score = 41.1 bits (95), Expect = 0.087, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G + E K + + + + FLE RL T V++ +I AR + RH+ Sbjct: 84 GILPEDKMKLDYVLSLKIED--------FLERRLQTQVFKLGLAKSIHHARVLITQRHIA 135 Query: 123 VNGRSVNIGSYRCK 136 V + V I S+ + Sbjct: 136 VGKQIVTIPSFMVR 149 >gi|39970971|ref|XP_366876.1| hypothetical protein MGG_02952 [Magnaporthe oryzae 70-15] gi|145017216|gb|EDK01579.1| hypothetical protein MGG_02952 [Magnaporthe oryzae 70-15] Length = 191 Score = 41.1 bits (95), Expect = 0.089, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 3/110 (2%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGD 83 N R + + + L L K + + G+ ++ + + + Sbjct: 35 KNKREVWRVQLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYV 94 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + + FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 95 LALKVEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|50555257|ref|XP_505037.1| YALI0F05544p [Yarrowia lipolytica] gi|49650907|emb|CAG77844.1| YALI0F05544p [Yarrowia lipolytica] Length = 192 Score = 41.1 bits (95), Expect = 0.089, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78 G G + K + GLQL ++ + EK + +F+ + Sbjct: 32 GEFGLKNKREIYRIGLQLSKIRRAARELLTRDEKDPKRLFEGNALIRRLVRLGVLPEDRM 91 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + + FLE RL T V++ +I AR ++ RH+ V + VN+ S+ + Sbjct: 92 KLDYVLALSPEDFLERRLQTQVFKLGLAKSIHHARVLISQRHIRVGKQIVNVPSFMVR 149 >gi|281500810|pdb|3JYV|D Chain D, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 158 Score = 41.1 bits (95), Expect = 0.089, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VNI S+ + Sbjct: 98 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 144 >gi|224071319|ref|XP_002303402.1| predicted protein [Populus trichocarpa] gi|222840834|gb|EEE78381.1| predicted protein [Populus trichocarpa] Length = 197 Score = 41.1 bits (95), Expect = 0.089, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++A +I AR + RH Sbjct: 85 YGLLEENQ--------NKLDYVLALTVENFLERRLQTLVFKAGMAKSIHHARVLIKQRHT 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQVVNIPSFMVRVDSQKHI 158 >gi|238882168|gb|EEQ45806.1| 40S ribosomal protein S9-B [Candida albicans WO-1] Length = 189 Score = 41.1 bits (95), Expect = 0.090, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 8/87 (9%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G +SE K + + A + FLE RL T V++ +I AR + RH+ Sbjct: 84 GVLSEDKMKLDYVLALKPED--------FLERRLQTQVFKLGLARSIHHARVLITQRHIA 135 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 V + VNI S+ + + Sbjct: 136 VGKQIVNIPSFTVRLDSQKHIDFAHNS 162 >gi|241951212|ref|XP_002418328.1| 40s ribosomal protein S9-B, putative [Candida dubliniensis CD36] gi|223641667|emb|CAX43628.1| 40s ribosomal protein S9-B, putative [Candida dubliniensis CD36] Length = 190 Score = 41.1 bits (95), Expect = 0.090, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 8/87 (9%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G +SE K + + A + FLE RL T V++ +I AR + RH+ Sbjct: 84 GVLSEDKMKLDYVLALKPED--------FLERRLQTQVFKLGLARSIHHARVLITQRHIA 135 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 V + VNI S+ + + Sbjct: 136 VGKQIVNIPSFTVRLDSQKHIDFAHNS 162 >gi|15606155|ref|NP_213532.1| hemolysin [Aquifex aeolicus VF5] gi|2983347|gb|AAC06935.1| hemolysin [Aquifex aeolicus VF5] Length = 258 Score = 41.1 bits (95), Expect = 0.092, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD + VP+ A+ + VLVNG+ V+ YR K + +EVK+ K ++ Sbjct: 1 MRLDKYLTDKGIVPSREKAQAVIMAGQVLVNGKVVDKPGYRLKGNEKVEVKELPKYVSRG 60 Query: 154 LEASQLA 160 E + A Sbjct: 61 GEKLEWA 67 >gi|297616625|ref|YP_003701784.1| hemolysin A [Syntrophothermus lipocalidus DSM 12680] gi|297144462|gb|ADI01219.1| hemolysin A [Syntrophothermus lipocalidus DSM 12680] Length = 270 Score = 41.1 bits (95), Expect = 0.092, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 +SRLDT+V+ PT AR + V+VNG V+ + + Sbjct: 3 KSRLDTLVHDRGLAPTREKARALILAGKVVVNGNRVDKPGTKVPVDANV 51 >gi|55982011|gb|AAV69398.1| 40S ribosomal protein S9 [Aedes aegypti] Length = 195 Score = 41.1 bits (95), Expect = 0.093, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78 G +G R K + L +K + + EK R + + Sbjct: 34 GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE L T V++ + AR + RH+ V + VNI S+ + Sbjct: 94 KLDYVLGLKIEDFLERCLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|50294438|ref|XP_449630.1| hypothetical protein [Candida glabrata CBS 138] gi|49528944|emb|CAG62606.1| unnamed protein product [Candida glabrata] Length = 194 Score = 41.1 bits (95), Expect = 0.093, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VNI S+ + Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149 >gi|50289209|ref|XP_447035.1| hypothetical protein [Candida glabrata CBS 138] gi|49526344|emb|CAG59968.1| unnamed protein product [Candida glabrata] Length = 194 Score = 41.1 bits (95), Expect = 0.093, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VNI S+ + Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149 >gi|284073118|gb|ADB77798.1| 40S ribosomal protein S9 [Cladophora coelothrix] Length = 179 Score = 41.1 bits (95), Expect = 0.096, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%) Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 ++ ++ + FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 91 EKQNKLDYILALTPADFLERRLQTQVFKLGLAKSIHHARVIIRQRHIRVGKQIVNVPSFM 150 Query: 135 CKEGDV 140 + Sbjct: 151 VRMESQ 156 >gi|119580809|gb|EAW60405.1| hCG41114, isoform CRA_b [Homo sapiens] Length = 103 Score = 41.1 bits (95), Expect = 0.097, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH V + VNI S+ + Sbjct: 2 KLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 59 >gi|323450976|gb|EGB06855.1| hypothetical protein AURANDRAFT_28757 [Aureococcus anophagefferens] Length = 196 Score = 41.1 bits (95), Expect = 0.098, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%) Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 101 MTTQRLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFLVR 151 >gi|57143|emb|CAA47013.1| ribosomal protein S9 [Rattus norvegicus] Length = 194 Score = 41.1 bits (95), Expect = 0.098, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 16/129 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVLKQV 141 Query: 128 VNIGSYRCK 136 VNI S+ + Sbjct: 142 VNIPSFIVR 150 >gi|308322141|gb|ADO28208.1| 40S ribosomal protein s9 [Ictalurus furcatus] gi|308324465|gb|ADO29367.1| 40S ribosomal protein s9 [Ictalurus punctatus] Length = 194 Score = 41.1 bits (95), Expect = 0.100, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 142 VNIPSFVVRLDSQKHIDFSLRS 163 >gi|154291725|ref|XP_001546443.1| 40S ribosomal protein S9 [Botryotinia fuckeliana B05.10] gi|150846653|gb|EDN21846.1| 40S ribosomal protein S9 [Botryotinia fuckeliana B05.10] Length = 191 Score = 41.1 bits (95), Expect = 0.100, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 F+E RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFMERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|317574793|ref|NP_001187074.1| 40S ribosomal protein S9 [Ictalurus punctatus] gi|15294029|gb|AAK95191.1|AF402817_1 40S ribosomal protein S9 [Ictalurus punctatus] Length = 194 Score = 41.1 bits (95), Expect = 0.100, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 82 VRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + + Sbjct: 142 VNIPSFVVRLDSQKHIDFSLRS 163 >gi|326773128|ref|ZP_08232411.1| cytotoxin/hemolysin [Actinomyces viscosus C505] gi|326636358|gb|EGE37261.1| cytotoxin/hemolysin [Actinomyces viscosus C505] Length = 290 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 R+D+ + R + A + HV ++G V + + IE+ S Sbjct: 5 IRIDSELVRRGLARSRTHAATLIADGHVTLDGEVVTKPARQVNPAQAIEILVPS 58 >gi|225708802|gb|ACO10247.1| 40S ribosomal protein S9 [Caligus rogercresseyi] Length = 190 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK R +F+ Sbjct: 23 KTRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + K Sbjct: 143 VNVPSFVVRLDSQKHIDFSLKS 164 >gi|57231025|gb|AAW47273.1| ribosomal protein S4 [Liriodendron tulipifera] Length = 320 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 + ++ + +K+ ++GD+ + + E+R D I Sbjct: 38 PRENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPV 91 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 R F TI ARQ ++HR V VN V+I + GD+I ++ Sbjct: 92 RLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLISFQEN 136 >gi|195623226|gb|ACG33443.1| 40S ribosomal protein S9 [Zea mays] Length = 194 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E + + + A T+ N ++ RL T+V++A +I AR + RH+ Sbjct: 85 YGLLAEGQNKLDYVLAL-----TAENFLA---RRLQTLVFKAGMAKSIHHARVLIKQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGRQIVNVPSFMVRVESEKHI 158 >gi|229367454|gb|ACQ58707.1| 40S ribosomal protein S9 [Anoplopoma fimbria] Length = 194 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|160550153|gb|ABX44781.1| putative 40S ribosomal protein RPS9 [Flustra foliacea] Length = 194 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI SY + Sbjct: 90 KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNIPSYVVR 149 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 150 LDSQKHIDFSLKS 162 >gi|255715507|ref|XP_002554035.1| KLTH0E12826p [Lachancea thermotolerans] gi|238935417|emb|CAR23598.1| KLTH0E12826p [Lachancea thermotolerans] Length = 193 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 21/138 (15%) Query: 20 WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 + PK P + G +G + K + QL ++ + EK R +F Sbjct: 12 YSTPKRPYESARLDAELKLAGEYGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPRRLF 71 Query: 75 K----------------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + + + + + FLE RL T VY+ ++ AR + Sbjct: 72 EGNAMIRRLVRLGVLSEDKKKLDHVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQ 131 Query: 119 RHVLVNGRSVNIGSYRCK 136 RH+ V + VN+ S+ + Sbjct: 132 RHIAVGKQLVNVPSFLVR 149 >gi|297811659|ref|XP_002873713.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata] gi|297319550|gb|EFH49972.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata] Length = 198 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + ++ Sbjct: 40 NKRELWRVQYSLSRIRNAARDLLTLDEKSPKRIFEGEALLRRMNRYGLLDESQNKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + +FLE RL TIV+++ +I +R + RH+ V + VNI S+ + Sbjct: 100 ALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQLVNIPSFMVR 151 >gi|189342214|gb|ACD91686.1| ribosomal protein S4 [Cousinia autrani] Length = 45 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K R +G K P G L Q R K S + Sbjct: 1 MSRYRGPRFKKIRHLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYR 45 >gi|195377017|ref|XP_002047289.1| GJ13353 [Drosophila virilis] gi|194154447|gb|EDW69631.1| GJ13353 [Drosophila virilis] Length = 195 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|195015334|ref|XP_001984182.1| GH15146 [Drosophila grimshawi] gi|193897664|gb|EDV96530.1| GH15146 [Drosophila grimshawi] Length = 195 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|89280731|ref|YP_514660.1| ribosomal protein S4 [Oryza sativa Indica Group] gi|289065037|ref|YP_003433848.1| ribosomal protein small subunit 4 [Oryza rufipogon] gi|3025870|gb|AAC26506.1| ribosomal protein S4 [Oryza sativa] gi|74100098|gb|AAZ99262.1| ribosomal protein S4 [Oryza sativa Indica Group] gi|74100153|gb|AAZ99316.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|74100207|gb|AAZ99369.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|285026119|dbj|BAI67952.1| ribosomal protein small subunit 4 [Oryza rufipogon] gi|285026169|dbj|BAI68001.1| ribosomal protein small subunit 4 [Oryza sativa Indica Group] Length = 352 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++ + +K+ YYGD+ ++ + + E+R D I R F T+ Sbjct: 53 IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLHFCDTL 106 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V +N V I + GD+I ++ Sbjct: 107 PQARQPISHRRVCLNNGLVTITHLKVSHGDLISFQEN 143 >gi|24661707|ref|NP_524004.2| ribosomal protein S9, isoform A [Drosophila melanogaster] gi|24661711|ref|NP_729506.1| ribosomal protein S9, isoform D [Drosophila melanogaster] gi|194867971|ref|XP_001972186.1| GG14025 [Drosophila erecta] gi|195326350|ref|XP_002029892.1| GM24860 [Drosophila sechellia] gi|195490797|ref|XP_002093291.1| RpS9 [Drosophila yakuba] gi|195589072|ref|XP_002084280.1| GD12912 [Drosophila simulans] gi|60416385|sp|P55935|RS9_DROME RecName: Full=40S ribosomal protein S9 gi|7294919|gb|AAF50249.1| ribosomal protein S9, isoform A [Drosophila melanogaster] gi|23093773|gb|AAN11946.1| ribosomal protein S9, isoform D [Drosophila melanogaster] gi|190653969|gb|EDV51212.1| GG14025 [Drosophila erecta] gi|194118835|gb|EDW40878.1| GM24860 [Drosophila sechellia] gi|194179392|gb|EDW93003.1| RpS9 [Drosophila yakuba] gi|194196289|gb|EDX09865.1| GD12912 [Drosophila simulans] gi|254750749|gb|ACT80127.1| LD13662p [Drosophila melanogaster] Length = 195 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI S+ + + K Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164 >gi|290989208|ref|XP_002677233.1| predicted protein [Naegleria gruberi] gi|284090839|gb|EFC44489.1| predicted protein [Naegleria gruberi] Length = 184 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 K ++ G +G + K + L +K ++ + E + F+ A R Sbjct: 23 KERLDRELRMCGKYGLKNKHEIWRVQYYLARARKTARHLLTLPEDDIKRQFEGAALLRRM 82 Query: 84 TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 T L+ LE RL TIV + +I ARQ + H+ V ++ Sbjct: 83 TRLGLLDESRQQLDYILSLKAEDLLERRLQTIVQKLNLSKSIHHARQLIFQGHIRVGKQT 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + + Sbjct: 143 VNVPSFTVRVDSEKHINKSPFS 164 >gi|209732856|gb|ACI67297.1| 40S ribosomal protein S9 [Salmo salar] gi|209734374|gb|ACI68056.1| 40S ribosomal protein S9 [Salmo salar] gi|223646122|gb|ACN09819.1| 40S ribosomal protein S9 [Salmo salar] gi|223671969|gb|ACN12166.1| 40S ribosomal protein S9 [Salmo salar] gi|225715988|gb|ACO13840.1| 40S ribosomal protein S9 [Esox lucius] Length = 194 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|57231029|gb|AAW47275.1| ribosomal protein S4 [Piper betle] Length = 326 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 13/136 (9%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++ + +K+ +YGD+ + + E+R D I R F T+ Sbjct: 46 IKSQTTRKLPLFYGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPVRLHFRETL 99 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169 ARQ ++HR V VN V+I + GD+I ++ + YI Sbjct: 100 PQARQPISHRRVCVNNGMVSITHLKVSHGDLISFQENEARTGGEEIRRSF-------YID 152 Query: 170 VNHDNMVATFVRIPSS 185 ++ +N++ F+ P Sbjct: 153 ISIENIIGKFLDHPVR 168 >gi|15242498|ref|NP_198801.1| 40S ribosomal protein S9 (RPS9C) [Arabidopsis thaliana] gi|75309179|sp|Q9FLF0|RS92_ARATH RecName: Full=40S ribosomal protein S9-2 gi|10176977|dbj|BAB10209.1| 40S ribosomal protein S9 [Arabidopsis thaliana] gi|21593688|gb|AAM65655.1| 40S ribosomal protein S9-like [Arabidopsis thaliana] gi|90568002|gb|ABD94071.1| At5g39850 [Arabidopsis thaliana] gi|332007100|gb|AED94483.1| 40S ribosomal protein S9-2 [Arabidopsis thaliana] Length = 197 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL TIV+++ +I AR + RH+ Sbjct: 85 YGLLDETQ--------NKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + V Sbjct: 137 RVGRQLVNIPSFMVRVESQKHV 158 >gi|297805734|ref|XP_002870751.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata] gi|297316587|gb|EFH47010.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata] Length = 197 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL TIV+++ +I AR + RH+ Sbjct: 85 YGLLDESQ--------NKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + V Sbjct: 137 RVGRQLVNIPSFMVRVESQKHV 158 >gi|54610887|gb|AAV35367.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. latiusculum] gi|54610889|gb|AAV35368.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. wightianum] gi|54610891|gb|AAV35369.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|54610893|gb|AAV35370.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. aquilinum] gi|54610901|gb|AAV35374.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp. centrali-africanum] gi|54610905|gb|AAV35376.1| ribosomal protein small subunit 4 [Pteridium arachnoideum] Length = 31 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 3/31 (9%) Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 RI + + LVVE+YSR Sbjct: 2 TGLVNRI---ASRESVNLNINELLVVEYYSR 29 >gi|20271156|gb|AAM18533.1|AF375592_1 ribosomal protein S4 [Magnolia x soulangeana] Length = 352 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 + ++ + +K+ ++GD+ + + E+R D I Sbjct: 45 PRENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPV 98 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 R F TI ARQ ++HR V VN V+I + GD+I ++ Sbjct: 99 RLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLISFQEN 143 >gi|219117986|ref|XP_002179777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408830|gb|EEC48763.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 167 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T VY+ +I AR + RH+ V + VN+ S+ + Sbjct: 93 TQKLLERRLQTKVYKQGLAKSIHHARVLIRQRHIRVGSQLVNVPSFNVR 141 >gi|151946577|gb|EDN64799.1| ribosomal protein S9B [Saccharomyces cerevisiae YJM789] gi|190408660|gb|EDV11925.1| ribosomal protein S9B [Saccharomyces cerevisiae RM11-1a] gi|290878203|emb|CBK39262.1| Rps9bp [Saccharomyces cerevisiae EC1118] Length = 195 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VNI S+ + Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149 >gi|256090381|ref|XP_002581172.1| 40S ribosomal protein S9 [Schistosoma mansoni] gi|238667016|emb|CAZ37411.1| 40S ribosomal protein S9, putative [Schistosoma mansoni] Length = 192 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 73 IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 + ++ + + FLE RL T V++ +I AR + RH+ V + VN Sbjct: 86 LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 145 Query: 133 YRCK 136 + + Sbjct: 146 FLVR 149 >gi|46129441|ref|XP_389072.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Gibberella zeae PH-1] Length = 191 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78 G +G R K + GL L ++ + + EK + +F+ Sbjct: 30 GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 89 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 90 KLDYVLALKIEDFLERRLQTCVWKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147 >gi|198285475|gb|ACH85276.1| ribosomal protein S9 [Salmo salar] Length = 191 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 88 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 147 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 148 LDSQKHIDFSLRS 160 >gi|160331211|ref|XP_001712313.1| rps9 [Hemiselmis andersenii] gi|159765760|gb|ABW97988.1| rps9 [Hemiselmis andersenii] Length = 181 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query: 42 KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101 K +Q ++ K + YG + E + + S + FLE RL TIV+ Sbjct: 63 PEKDPRRLIQGKSLIKRLRKYGILEENQ--------ETLDHILSLKIQDFLERRLQTIVF 114 Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + K +I +R + RH+ V+ R V++ S+ + +++ SK Sbjct: 115 KKKLAESIHHSRVLIKQRHISVDKRLVDVPSFLVRLKSQDKIEYFSKS 162 >gi|149248702|ref|XP_001528738.1| 40S ribosomal protein S9-B [Lodderomyces elongisporus NRRL YB-4239] gi|146448692|gb|EDK43080.1| 40S ribosomal protein S9-B [Lodderomyces elongisporus NRRL YB-4239] Length = 188 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G +SE K + + A R FLE RL T V++ +I AR ++ RH+ Sbjct: 84 GVLSEDKMKLDYVLALRIED--------FLERRLQTQVFKLGLARSIHHARVLISQRHIA 135 Query: 123 VNGRSVNIGSYRCK 136 V + VN+ S+ + Sbjct: 136 VGRQIVNVPSFTVR 149 >gi|6319666|ref|NP_009748.1| Rps9bp [Saccharomyces cerevisiae S288c] gi|585935|sp|P05755|RS9B_YEAST RecName: Full=40S ribosomal protein S9-B; AltName: Full=RP21; AltName: Full=S13; AltName: Full=YP28; AltName: Full=YS11 gi|172795|gb|AAB59327.1| ribosomal protein S13 [Saccharomyces cerevisiae] gi|536552|emb|CAA85151.1| SUP46 [Saccharomyces cerevisiae] gi|575916|gb|AAB60283.1| ribosomal protein S13 [Saccharomyces cerevisiae] gi|285810519|tpg|DAA07304.1| TPA: Rps9bp [Saccharomyces cerevisiae S288c] Length = 195 Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VNI S+ + Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149 >gi|226531716|ref|NP_001149240.1| 40S ribosomal protein S9 [Zea mays] gi|195622330|gb|ACG32995.1| 40S ribosomal protein S9 [Zea mays] gi|195625718|gb|ACG34689.1| 40S ribosomal protein S9 [Zea mays] gi|219885117|gb|ACL52933.1| unknown [Zea mays] Length = 194 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E + + + A T+ N ++ RL T+V++A +I AR + RH+ Sbjct: 85 YGLLAEGQNKLDYVLAL-----TAENFLA---RRLQTLVFKAGMAKSIHHARVLIKQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGRQIVNVPSFMVRVESEKHI 158 >gi|119580811|gb|EAW60407.1| hCG41114, isoform CRA_d [Homo sapiens] Length = 145 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 T + FLE RL T V++ +I AR + RH V + VNI S+ + Sbjct: 49 TLAKIQDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 101 >gi|326500076|dbj|BAJ90873.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326515032|dbj|BAJ99877.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 195 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG +SE + ++ + + +FL+ RL TIV++ +I AR + RH+ Sbjct: 85 YGLLSEDQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + V Sbjct: 137 RVGKQLVNIPSFMVRVDTEKHV 158 >gi|50310015|ref|XP_455021.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644156|emb|CAH00108.1| KLLA0E23673p [Kluyveromyces lactis] Length = 188 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR ++ RH+ V + VNI S+ + Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLISQRHIAVGKQIVNIPSFMVR 149 >gi|302919108|ref|XP_003052792.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733732|gb|EEU47079.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 191 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78 G +G R K + GL L ++ + + EK + +F+ Sbjct: 30 GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 89 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 90 KLDYVLALKIEDFLERRLQTCVWKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147 >gi|168019716|ref|XP_001762390.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686468|gb|EDQ72857.1| predicted protein [Physcomitrella patens subsp. patens] Length = 198 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 3/112 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + + Sbjct: 40 NKRELWRVQYVLSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDESQCKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + +FLE RL T+V+++ +I AR + RH+ V + V++ S+ + Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVR 151 >gi|42415539|ref|NP_957146.1| ribosomal protein S9 [Danio rerio] gi|37748740|gb|AAH59492.1| Ribosomal protein S9 [Danio rerio] gi|38571718|gb|AAH62833.1| Ribosomal protein S9 [Danio rerio] Length = 194 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 91 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|264667325|gb|ACY71248.1| ribosomal protein S9 [Chrysomela tremulae] Length = 194 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T+V+++ +I AR + RH+ V + VNI S+ + Sbjct: 92 RMKLDYVLGLKIEDFLERRLQTLVFQSGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 151 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 152 LDSSKHIDFSLKS 164 >gi|15242241|ref|NP_197024.1| 40S ribosomal protein S9 (RPS9B) [Arabidopsis thaliana] gi|75311670|sp|Q9LXG1|RS91_ARATH RecName: Full=40S ribosomal protein S9-1 gi|7671489|emb|CAB89330.1| 40S ribosomal protein-like [Arabidopsis thaliana] gi|38566648|gb|AAR24214.1| At5g15200 [Arabidopsis thaliana] gi|40824134|gb|AAR92351.1| At5g15200 [Arabidopsis thaliana] gi|110736816|dbj|BAF00367.1| 40S ribosomal protein - like [Arabidopsis thaliana] gi|332004745|gb|AED92128.1| 40S ribosomal protein S9-1 [Arabidopsis thaliana] Length = 198 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84 N R + R + L L K + + G+ ++ + ++ Sbjct: 40 NKRELWRVQYSLSRIRNAARDLLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVL 99 Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + +FLE RL TIV+++ +I +R + RH+ V + VNI S+ + Sbjct: 100 ALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQLVNIPSFMVR 151 >gi|170037445|ref|XP_001846568.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167880676|gb|EDS44059.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 195 Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78 G +G R K + L +K + + EK R + + Sbjct: 34 GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ + AR + RH+ V + VNI S+ + Sbjct: 94 KLDYVLGLKIDDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|227541993|ref|ZP_03972042.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51866] gi|227182208|gb|EEI63180.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51866] Length = 270 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 RLD + R K + ARQ + HV V G + + Sbjct: 5 RRLDAELVRRKIARSREQARQLITDGHVFVGGFKASKPA 43 >gi|227489011|ref|ZP_03919327.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51867] gi|227091087|gb|EEI26399.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51867] Length = 270 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 RLD + R K + ARQ + HV V G + + Sbjct: 5 RRLDAELVRRKIARSREQARQLITDGHVFVGGFKASKPA 43 >gi|312372913|gb|EFR20767.1| hypothetical protein AND_19485 [Anopheles darlingi] Length = 203 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ + AR + RH+ V + VNI S+ + Sbjct: 99 RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVR 158 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 159 LDSQKHIDFSLKS 171 >gi|329946512|ref|ZP_08294028.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp. oral taxon 170 str. F0386] gi|328527143|gb|EGF54148.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp. oral taxon 170 str. F0386] Length = 290 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 R+D+ + R + A + HV ++G V + + IE+ Sbjct: 5 IRIDSELVRRGLARSRTHAATLITDGHVTLDGVVVTKPARQVNPAQAIEI 54 >gi|325069012|ref|ZP_08127685.1| hemolysin A [Actinomyces oris K20] Length = 86 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 R+D+ + R + A + HV ++G V + + IE+ S Sbjct: 5 IRIDSELVRRGLARSRTHAATLIADGHVTLDGEVVTKPARQVNPAQAIEILVPS 58 >gi|158187832|gb|ABW23205.1| ribosomal protein rps9 [Eurythoe complanata] Length = 180 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 K ++ G +G R K + L +K + + EK R +F+ Sbjct: 9 KERLDQELKLIGEYGLRNKREVWRVKYTLANIRKAARELLTLDEKDPRRLFEGNALLRRL 68 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + L FLE RL T V++ +I AR + RH+ V + Sbjct: 69 VRIGVLDEGKMKLDYVLGLRLDDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 128 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VNI SY + + + Sbjct: 129 VNIPSYVVRLDSQKHIDFSLRS 150 >gi|225452773|ref|XP_002283256.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225456733|ref|XP_002275166.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296082890|emb|CBI22191.3| unnamed protein product [Vitis vinifera] gi|297733997|emb|CBI15244.3| unnamed protein product [Vitis vinifera] Length = 197 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V+++ +I AR + RH+ Sbjct: 85 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQVVNIPSFLVRMDSQKHI 158 >gi|154508712|ref|ZP_02044354.1| hypothetical protein ACTODO_01220 [Actinomyces odontolyticus ATCC 17982] gi|153798346|gb|EDN80766.1| hypothetical protein ACTODO_01220 [Actinomyces odontolyticus ATCC 17982] Length = 275 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 16/89 (17%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 R+D+ + R + AA Q + V ++G+ V + + I V+ Sbjct: 4 RRIDSELVRRGLAKSRAAAAQMIEDGRVKLDGQIVLKPARQMDPAQAIVVE--------- 54 Query: 154 LEASQLAERDVPEYISVNHDNMVATFVRI 182 E D PEY+S + + Sbjct: 55 -------ESDDPEYVSRGAHKLAGVLDAL 76 >gi|45190352|ref|NP_984606.1| AEL255Wp [Ashbya gossypii ATCC 10895] gi|44983248|gb|AAS52430.1| AEL255Wp [Ashbya gossypii ATCC 10895] Length = 188 Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY+ ++ AR + RH+ V + VN+ S+ + Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNVPSFMVR 149 >gi|300394140|gb|ADK11698.1| ribosomal protein S9 [Oncorhynchus masou rhodurus] Length = 175 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 81 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 140 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 141 LDSQKHIDFSLRS 153 >gi|116193753|ref|XP_001222689.1| 40S ribosomal protein S9 [Chaetomium globosum CBS 148.51] gi|88182507|gb|EAQ89975.1| 40S ribosomal protein S9 [Chaetomium globosum CBS 148.51] Length = 191 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T+VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|38048283|gb|AAR10044.1| similar to Drosophila melanogaster RpS9 [Drosophila yakuba] Length = 163 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 16/126 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73 K+ ++ G +G R K + L +K + + EK R + Sbjct: 23 KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82 Query: 74 FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSY 133 VNI S+ Sbjct: 143 VNIPSF 148 >gi|326386140|ref|ZP_08207764.1| RNA-binding S4 [Novosphingobium nitrogenifigens DSM 19370] gi|326209365|gb|EGD60158.1| RNA-binding S4 [Novosphingobium nitrogenifigens DSM 19370] Length = 100 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 R+D +++ + T A+++ H+ +NGR V S + GD++ + + Sbjct: 9 PGIRIDKLLWFLRLASTRTFAQEWAGEGHIRLNGRRVERPSATVRAGDILVL--PMRTAV 66 Query: 152 SVLEASQLAERDVPE 166 V+E + R P Sbjct: 67 KVIEVLAIPARRGPA 81 >gi|297728555|ref|NP_001176641.1| Os11g0602501 [Oryza sativa Japonica Group] gi|255680249|dbj|BAH95369.1| Os11g0602501 [Oryza sativa Japonica Group] Length = 94 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 E RL T+V++A +I AR + RH+ V + VNI S+ + + Sbjct: 7 EPRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 57 >gi|167042196|gb|ABZ06928.1| putative S4 domain protein [uncultured marine crenarchaeote HF4000_ANIW93I24] Length = 204 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 2/138 (1%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86 R R + L LR + + +K I + + + Sbjct: 36 KTKRELWKTQTELSRVRLQARSLLALRQEIRERKEPILIQSLSKIGLVDQNSTLDDVLNL 95 Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 + L RL TI + + T + ARQ + H H+++ V I SY K + ++ Sbjct: 96 QVTDLLSRRLQTITQKKLYFKTPYQARQAIVHGHIMIGDSVVTIPSYIVKTEEETKIHLI 155 Query: 147 SKQLASVLEASQLAERDV 164 S+ E E D+ Sbjct: 156 SES--RFNETLSKPESDL 171 >gi|321477093|gb|EFX88052.1| hypothetical protein DAPPUDRAFT_230323 [Daphnia pulex] gi|321477340|gb|EFX88299.1| hypothetical protein DAPPUDRAFT_230321 [Daphnia pulex] Length = 194 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T V++ +I AR + RH+ V + VNI S+ + Sbjct: 105 DFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNIPSFIVR 151 >gi|89099473|ref|ZP_01172349.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89085859|gb|EAR64984.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 415 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 10/145 (6%) Query: 14 RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY---YGDISEKKF 70 R+ +L K + + LH P +QL + + +E F Sbjct: 277 RLATSLPLAEKMSIQEKLEEGSLH-------PRDAKMQLARTIVSMYHGHEAAEKAEDHF 329 Query: 71 RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130 +S+F++ + E L ++ A F P+ AR V + V +NG Sbjct: 330 KSVFQQGSMPEDMPALTWDGSDEPDLLELLMFAGFFPSRSEARWMVLNGGVRMNGEKAED 389 Query: 131 GSYRCKEGDVIEVKQKSKQLASVLE 155 + + + ++ ++ A + + Sbjct: 390 INTKVSLQAELILQVGKRKFARIKK 414 >gi|158563818|gb|ABW74360.1| ribosomal protein S9 [Modiolus modiolus] Length = 120 Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + L FLE RL T V++ +I AR + RH+ V + VNI SY + Sbjct: 61 KMKLDYVLGLRLEDFLERRLQTQVFKLGLAKSIHHARVVIRQRHIRVRKQVVNIPSYIVR 120 >gi|67481871|ref|XP_656285.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS] gi|56473474|gb|EAL50899.1| 40S ribosomal protein S9, putative [Entamoeba histolytica HM-1:IMSS] Length = 185 Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + LE RL T+VYR F +I AR + + + V + V++ S+ + ++ Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162 Query: 150 LASVLEASQLAERD 163 + E + +R Sbjct: 163 PLTNPEINGRRKRK 176 >gi|194691526|gb|ACF79847.1| unknown [Zea mays] Length = 112 Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FL+ RL TIV++ +I AR + RH+ Sbjct: 4 YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 55 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 56 RVGRQLVNIPSFMVRVDSEKHI 77 >gi|164422223|gb|ABY55196.1| ribosomal protein S4 [Bambusa oldhamii] Length = 344 Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 50 LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109 ++ + +K+ YYGD+ ++ + + E+R D I R F T+ Sbjct: 53 IKSQTTRKLSLYYGDLPRREMHRGRERTSYIP------FLLNQETRSDVIPVRLHFSDTL 106 Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 ARQ ++HR V +N V I + GD+I ++ Sbjct: 107 PQARQPISHRRVCLNNGLVTITHLKVSHGDLISFQEN 143 >gi|146163443|ref|XP_001011432.2| ribosomal protein S4 containing protein [Tetrahymena thermophila] gi|319443359|pdb|2XZM|D Chain D, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 gi|319443394|pdb|2XZN|D Chain D, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 2 gi|146146073|gb|EAR91187.2| ribosomal protein S4 containing protein [Tetrahymena thermophila SB210] gi|315570309|tpg|DAA33973.1| TPA_exp: 40S ribosomal protein rpS9e [Tetrahymena thermophila] Length = 181 Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 8/90 (8%) Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 YG +SE+ + + +E RL T V++ +I +R + R Sbjct: 81 FKYGLLSEQ--------ERKLDYVLGLTIHKLMERRLQTRVFKLNLANSIHHSRVLIRQR 132 Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 H+ V VN+ S+ + + S Sbjct: 133 HIKVGKNLVNVPSFMVRTDSEKSIDFASTS 162 >gi|307006555|gb|ADN23562.1| ribosomal protein S4 [Hyalomma marginatum rufipes] Length = 151 Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 49 KMKLDYVLGLRIEDFLERRLQTQVFKHGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 108 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 109 LDSEKHIDFSLKS 121 >gi|167383739|ref|XP_001736652.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760] gi|165900833|gb|EDR27065.1| 40S ribosomal protein S9, putative [Entamoeba dispar SAW760] Length = 185 Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + LE RL T+VYR F +I AR + + + V + V++ S+ + ++ Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162 Query: 150 LASVLEASQLAERD 163 + E + +R Sbjct: 163 PLTNPEINGRRKRK 176 >gi|225711720|gb|ACO11706.1| 40S ribosomal protein S9 [Caligus rogercresseyi] Length = 190 Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75 K+ ++ G +G R K + L +K + + EK R +F+ Sbjct: 23 KTRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 82 Query: 76 --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 83 VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142 Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149 VN+ S+ + + K Sbjct: 143 VNVPSFVVRLDSQKRIDFSLKS 164 >gi|316969051|gb|EFV53215.1| putative ribosomal protein S4 [Trichinella spiralis] Length = 191 Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%) Query: 63 GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 G + E++ + + R FLE RL T V++ +I AR + RH+ Sbjct: 84 GVLREEQMKLDYVLGLRVED--------FLERRLQTQVFKKGLAKSIHHARVMILQRHIR 135 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 V + VN+ S+ + ++ + Sbjct: 136 VRRQVVNVPSFIVRLDSEKHIELSLRS 162 >gi|303274947|ref|XP_003056784.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461136|gb|EEH58429.1| predicted protein [Micromonas pusilla CCMP1545] Length = 196 Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 53 RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112 A + YG + E + D+ + + +FLE RL T+V++ ++ A Sbjct: 76 EAIMRRMYRYGLLDETQ--------DKLDYVLALSADAFLERRLQTLVFKLGLAKSVHHA 127 Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 R + RH+ V + VN+ S+ + + Sbjct: 128 RVLIRQRHIRVGKQIVNVPSFLVRTDSQKHI 158 >gi|47027041|gb|AAT08735.1| 40S ribosomal protein S9 [Hyacinthus orientalis] Length = 197 Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 8/75 (10%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E++ ++ + + +FLE RL T V++ +I AR + RH+ Sbjct: 85 YGLLDEEQ--------NKLDYVLALTVENFLERRLQTQVFKTGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCK 136 V + VN+ S+ K Sbjct: 137 RVGRQVVNVPSFLVK 151 >gi|289548511|ref|YP_003473499.1| hemolysin A [Thermocrinis albus DSM 14484] gi|289182128|gb|ADC89372.1| hemolysin A [Thermocrinis albus DSM 14484] Length = 258 Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD + PT A+ + V V+GR V+ +R K + +E+K+ + Sbjct: 1 MRLDVYLVEKGLAPTREKAQALIMAGMVTVDGRVVDKPGFRLKGTEKVELKEGLR 55 >gi|293192941|ref|ZP_06609785.1| cytotoxin/hemolysin [Actinomyces odontolyticus F0309] gi|292819997|gb|EFF78996.1| cytotoxin/hemolysin [Actinomyces odontolyticus F0309] Length = 275 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 R+D+ + R + AA Q + V ++G+ V + + I Sbjct: 4 RRIDSELVRRGLAKSRAAAAQMIEDGRVKLDGQIVLKPARQMDPAQAI 51 >gi|67482301|ref|XP_656500.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS] gi|67483353|ref|XP_656950.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS] gi|67484266|ref|XP_657353.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS] gi|108935891|sp|O15612|RS9_ENTHI RecName: Full=40S ribosomal protein S9 gi|56473701|gb|EAL51113.1| 40S ribosomal protein S9, putative [Entamoeba histolytica HM-1:IMSS] gi|56474185|gb|EAL51568.1| 40S ribosomal protein S9, putative [Entamoeba histolytica HM-1:IMSS] gi|56474602|gb|EAL51965.1| 40S ribosomal protein S9, putative [Entamoeba histolytica HM-1:IMSS] Length = 185 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + LE RL T+VYR F +I AR + + + V + V++ S+ + ++ Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162 Query: 150 LASVLEASQLAERD 163 + E + +R Sbjct: 163 PLTNPEINGRRKRK 176 >gi|318087224|gb|ADV40204.1| 40S ribosomal protein S9 [Latrodectus hesperus] Length = 155 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 53 KMKLDYVLGLRVEHFLERRLQTQVFKQGLAKSIHHARVLIRQRHIRVRKQVVNVPSFIVR 112 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 113 LDSEKHIDFSVKS 125 >gi|254577891|ref|XP_002494932.1| ZYRO0A13200p [Zygosaccharomyces rouxii] gi|238937821|emb|CAR25999.1| ZYRO0A13200p [Zygosaccharomyces rouxii] Length = 198 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + + FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 90 KKKLDYVLALKPEDFLERRLQTQVYKLGLAKSIHHARVLITQRHIAVGKQIVNVPSF 146 >gi|167382113|ref|XP_001735978.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760] gi|167388875|ref|XP_001738729.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760] gi|167395168|ref|XP_001741253.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760] gi|165894243|gb|EDR22303.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760] gi|165897898|gb|EDR24942.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760] gi|165901779|gb|EDR27791.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760] Length = 185 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + LE RL T+VYR F +I AR + + + V + V++ S+ + ++ Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162 Query: 150 LASVLEASQLAERD 163 + E + +R Sbjct: 163 PLTNPEINGRRKRK 176 >gi|17535707|ref|NP_496384.1| Ribosomal Protein, Small subunit family member (rps-9) [Caenorhabditis elegans] gi|2500404|sp|Q20228|RS9_CAEEL RecName: Full=40S ribosomal protein S9 gi|3876944|emb|CAA93262.1| C. elegans protein F40F8.10, confirmed by transcript evidence [Caenorhabditis elegans] Length = 189 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + H+ V + V++ S+ + Sbjct: 90 KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVR 149 >gi|268532096|ref|XP_002631176.1| C. briggsae CBR-RPS-9 protein [Caenorhabditis briggsae] gi|187036984|emb|CAP23650.1| CBR-RPS-9 protein [Caenorhabditis briggsae AF16] Length = 189 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + H+ V + V++ S+ + Sbjct: 90 KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVR 149 >gi|71025925|ref|XP_762670.1| ribosomal protein S4 [Theileria parva strain Muguga] gi|68349619|gb|EAN30387.1| ribosomal protein S4, putative [Theileria parva] Length = 205 Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 3/107 (2%) Query: 41 RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100 +K K Y +L K+ K D+ +KK + F ++ + + L+SRLD ++ Sbjct: 31 KKKKHIYKEYKLPTNIKILKILYDVKDKKLKYSF---NKFLFVNIYKFLKILKSRLDFVL 87 Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 + TI ++Q ++H+H+ +N SY K D+I + S Sbjct: 88 FNNNLFSTINQSKQNISHKHIFLNNTIARHPSYCVKNLDIIHLYNIS 134 >gi|308510180|ref|XP_003117273.1| CRE-RPS-9 protein [Caenorhabditis remanei] gi|308242187|gb|EFO86139.1| CRE-RPS-9 protein [Caenorhabditis remanei] Length = 189 Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + H+ V + V++ S+ + Sbjct: 90 KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVR 149 >gi|192913014|gb|ACF06615.1| 40S ribosomal protein S9 [Elaeis guineensis] Length = 197 Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 +G + E + ++ + + +FLE RL T V+++ +I AR + RH+ Sbjct: 85 FGLLDENQ--------NKLDYVLALTVENFLERRLQTQVFKSGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQLVNIPSFMVRVDSAKHI 158 >gi|322517734|ref|ZP_08070592.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124] gi|322123627|gb|EFX95224.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124] Length = 41 Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 3/35 (8%) Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + + +R+P + LVVEFY++ Sbjct: 8 AKKLKGSLIRLPERDE---INPETNEALVVEFYNK 39 >gi|269146666|gb|ACZ28279.1| 40S ribosomal protein S9 [Simulium nigrimanum] Length = 198 Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 3/103 (2%) Query: 50 LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 L L K + + + G+ ++ + + + + FLE RL T V++ Sbjct: 62 LTLEEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 121 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + AR + RH+ V + VN S+ + + K Sbjct: 122 KSFHHARVLIRQRHIRVRKQVVNTPSFIVRLDSQKHIDFSLKS 164 >gi|68469667|ref|XP_721085.1| potential cytosolic ribosomal protein S9 [Candida albicans SC5314] gi|46442986|gb|EAL02271.1| potential cytosolic ribosomal protein S9 [Candida albicans SC5314] Length = 162 Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 10/127 (7%) Query: 23 PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82 K P R+ + + K + ++ ++ G +SE K + + A Sbjct: 19 SKCPKIRRAAREFVTRGEKGPKKIIRKVMALIRRLVRF--GFLSEDKMKLDYVLA----- 71 Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 N FL R V++ +I AR + H+ V + V I S+ + Sbjct: 72 ---WNPEVFLNRRFQPQVFKLGLARSIPHARVLITQSHIAVGKQIVTIPSFTVRLDSQKH 128 Query: 143 VKQKSKQ 149 + Sbjct: 129 IDFAHNS 135 >gi|209735814|gb|ACI68776.1| 40S ribosomal protein S9 [Salmo salar] Length = 194 Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V ++VNI S+ + Sbjct: 91 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQAVNIPSFVVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|189342498|gb|ACD91828.1| ribosomal protein S4 [Cousinia chionophila] Length = 45 Score = 39.9 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49 MS+ + K RR+G K P G L Q R K S + Sbjct: 1 MSRXRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYR 45 >gi|57231027|gb|AAW47274.1| ribosomal protein S4 [Philodendron hederaceum var. oxycardium] Length = 271 Score = 39.9 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Query: 70 FRSIFKEADRSRGDTSHNLISF-LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 F E R TS+ + E+R D I R F TI ARQ ++HR + VN V Sbjct: 30 FHGSITEMHRGTEQTSYIPLQLNPETRSDVIPVRLHFRETISQARQPISHRRLCVNNGIV 89 Query: 129 NIGSYRCKEGDVIEVKQK 146 ++ ++ GD+I ++ Sbjct: 90 SMTHFKVSHGDLISFQEN 107 >gi|58385426|ref|XP_313936.2| AGAP005061-PB [Anopheles gambiae str. PEST] gi|55240453|gb|EAA09489.2| AGAP005061-PB [Anopheles gambiae str. PEST] Length = 195 Score = 39.9 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78 G +G R K + L +K + + EK R + + Sbjct: 34 GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93 Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 + + FLE RL T V++ + AR + RH+ V + VN+ S+ + Sbjct: 94 KLDYVLGLRIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNVPSFIVRLD 153 Query: 139 DVIEVKQKSKQ 149 + K Sbjct: 154 SQKHIDFSLKS 164 >gi|156843340|ref|XP_001644738.1| hypothetical protein Kpol_1024p34 [Vanderwaltozyma polyspora DSM 70294] gi|156847194|ref|XP_001646482.1| hypothetical protein Kpol_1048p55 [Vanderwaltozyma polyspora DSM 70294] gi|156115387|gb|EDO16880.1| hypothetical protein Kpol_1024p34 [Vanderwaltozyma polyspora DSM 70294] gi|156117159|gb|EDO18624.1| hypothetical protein Kpol_1048p55 [Vanderwaltozyma polyspora DSM 70294] Length = 192 Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 21/138 (15%) Query: 20 WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 + PK P + G G + K + QL ++ + EK + +F Sbjct: 12 YSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLF 71 Query: 75 KEADRSRGDTSHNLI----------------SFLESRLDTIVYRAKFVPTIFAARQFVNH 118 + R T ++ FLE RL T VY+ ++ AR ++ Sbjct: 72 EGNALIRRLTRVGVLSEDKRKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLISQ 131 Query: 119 RHVLVNGRSVNIGSYRCK 136 RH+ V + V I S+ + Sbjct: 132 RHIAVGKQIVTIPSFMVR 149 >gi|226503021|ref|NP_001149705.1| 40S ribosomal protein S9 [Zea mays] gi|195629612|gb|ACG36447.1| 40S ribosomal protein S9 [Zea mays] Length = 193 Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FL+ RL TIV++ +I AR + RH+ Sbjct: 85 YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQLVNIPSFMVRVESEKHI 158 >gi|330318726|gb|AEC11023.1| 40S ribosomal protein s9 [Camellia sinensis] Length = 148 Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++ +I AR + RH+ Sbjct: 36 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIRQRHI 87 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 88 RVGRQVVNIASFLVRVDSQKHI 109 >gi|295667371|ref|XP_002794235.1| 40S ribosomal protein S9 [Paracoccidioides brasiliensis Pb01] gi|225680017|gb|EEH18301.1| 40S ribosomal protein S9-2 [Paracoccidioides brasiliensis Pb03] gi|226286341|gb|EEH41907.1| 40S ribosomal protein S9 [Paracoccidioides brasiliensis Pb01] gi|226291800|gb|EEH47228.1| 40S ribosomal protein S9 [Paracoccidioides brasiliensis Pb18] Length = 191 Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144 >gi|67084055|gb|AAY66962.1| 40S ribosomal protein S9 [Ixodes scapularis] Length = 192 Score = 39.9 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 90 KMKLDYVLGLRIEDFLERRLQTQVFKHGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 149 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 150 LDSEKHIDFSLKS 162 >gi|2897739|dbj|BAA24900.1| ribosomal protein S9 [Schizosaccharomyces pombe] Length = 184 Score = 39.9 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 96 DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 139 >gi|300521574|gb|ADK25998.1| r-protein S4p [Candidatus Nitrososphaera gargensis] Length = 170 Score = 39.9 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 43/109 (39%) Query: 28 NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87 N R R + L L A+ + +K ++ + KE + Sbjct: 37 NKRELWKAQTEVARIRNQARALLALSAEARAEKEKRLLNFLNRLGLAKEGATLDDILNLK 96 Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + LE RL TIV + + + ARQ V+H HV + R VNI Y + Sbjct: 97 VEDLLERRLQTIVMKKSGTKSPYQARQMVSHGHVSIGSRKVNIPGYLVR 145 >gi|241859223|ref|XP_002416200.1| 40S ribosomal protein S9, putative [Ixodes scapularis] gi|215510414|gb|EEC19867.1| 40S ribosomal protein S9, putative [Ixodes scapularis] Length = 192 Score = 39.9 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 90 KMKLDYVLGLRIEDFLERRLQTQVFKHGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 149 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 150 LDSEKHIDFSLKS 162 >gi|19113857|ref|NP_592945.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe 972h-] gi|1173181|sp|Q09757|RS9A_SCHPO RecName: Full=40S ribosomal protein S9-A gi|984704|emb|CAA90851.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe] Length = 191 Score = 39.9 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 146 >gi|19112632|ref|NP_595840.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe 972h-] gi|6094199|sp|O59675|RS9B_SCHPO RecName: Full=40S ribosomal protein S9-B gi|3006148|emb|CAA18389.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe] Length = 192 Score = 39.9 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 146 >gi|294950672|ref|XP_002786733.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] gi|239901052|gb|EER18529.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] Length = 188 Score = 39.9 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T V++ ++ AR + RH+ V + ++ S+ + Sbjct: 104 KMLERRLQTKVFKLGLAKSVHHARVLIKQRHIRVGKQICDVPSFMVR 150 >gi|154273951|ref|XP_001537827.1| 40S ribosomal protein S9 [Ajellomyces capsulatus NAm1] gi|150415435|gb|EDN10788.1| 40S ribosomal protein S9 [Ajellomyces capsulatus NAm1] Length = 178 Score = 39.9 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144 >gi|330795964|ref|XP_003286040.1| rp1024 protein [Dictyostelium purpureum] gi|325084038|gb|EGC37476.1| rp1024 protein [Dictyostelium purpureum] Length = 186 Score = 39.9 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 ++ + + F+E RL T+V++ +I AR + RH+ V + VN+ S+ + Sbjct: 88 KNKLDYVLNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVR 147 Query: 137 EGDVIEVKQKSKQ 149 + S Sbjct: 148 VESQKHLGLASTS 160 >gi|167044120|gb|ABZ08803.1| putative S4 domain protein [uncultured marine crenarchaeote HF4000_APKG5C13] Length = 204 Score = 39.9 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 2/138 (1%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86 R R + L LR + + +K I + + + Sbjct: 36 KTKRELWKTQTKLSRVRLQARSLLALRQEIRERKEPILIQSLSKIGLVDQNSTLDDVLNL 95 Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 + L RL TI + + T + ARQ + H HV++ V I SY K + +++ Sbjct: 96 QVTDLLSRRLQTIAQKKLYFKTPYQARQAIVHGHVMIEDSVVTIPSYIVKTEEETKIRLI 155 Query: 147 SKQLASVLEASQLAERDV 164 + E E D+ Sbjct: 156 PES--RFNETLSKPESDL 171 >gi|5381275|dbj|BAA82319.1| ribosomal protein S9 homolog [Schizosaccharomyces pombe] Length = 189 Score = 39.5 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 100 DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 143 >gi|313681945|ref|YP_004059683.1| hemolysin a [Sulfuricurvum kujiense DSM 16994] gi|313154805|gb|ADR33483.1| hemolysin A [Sulfuricurvum kujiense DSM 16994] Length = 236 Score = 39.5 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 4/85 (4%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD+ + FV + A+Q + V V G+ V+ S+ EG + + Sbjct: 1 MRLDSYLVEQGFVESRTKAQQLIKEHAVSVEGKIVDKVSFDVAEGMEVVLADT----EIY 56 Query: 154 LEASQLAERDVPEYISVNHDNMVAT 178 + + + + Y + A Sbjct: 57 VSRAAIKLKGFLPYTEWEIKGLRAL 81 >gi|193290616|gb|ACF17616.1| S-9 [Lagenorhynchus obliquidens] Length = 126 Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 16/124 (12%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 3 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 62 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 + + FLE RL T V++ +I AR + RH+ V + Sbjct: 63 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 122 Query: 128 VNIG 131 VNI Sbjct: 123 VNIP 126 >gi|242083466|ref|XP_002442158.1| hypothetical protein SORBIDRAFT_08g015270 [Sorghum bicolor] gi|241942851|gb|EES15996.1| hypothetical protein SORBIDRAFT_08g015270 [Sorghum bicolor] Length = 195 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG ++E + + + A T+ N ++ RL T+V++A +I AR + RH+ Sbjct: 85 YGLLAEGQNKLDYVLAL-----TAENFLA---RRLQTLVFKAGMAKSIHHARVLIKQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGRQIVNVPSFMVRVESEKHI 158 >gi|149391809|gb|ABR25839.1| 40S ribosomal protein S9 [Oryza sativa Indica Group] Length = 116 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 +FL RL T+V++A +I AR + RH+ V + VNI S+ + + Sbjct: 26 NFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 79 >gi|256832356|ref|YP_003161083.1| hemolysin A [Jonesia denitrificans DSM 20603] gi|256685887|gb|ACV08780.1| hemolysin A [Jonesia denitrificans DSM 20603] Length = 310 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 RLD V P+ A + ++ V VNGRS+ ++ D I +K Sbjct: 8 RRLDVTVVMRGLAPSRNRAARIISDGAVFVNGRSITKPAWPVHNADTITLK 58 >gi|91983770|gb|ABE68882.1| 40S ribosomal protein S9 [Rhizoctonia solani] Length = 203 Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 L+L AK + + G+ ++ + + R + + FLE RL T V+++ Sbjct: 60 LKLEAKDPKRLFEGNALIRRLVRIGVLDENRMRLDYVLALKIEDFLERRLQTQVFKSGLA 119 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSY 133 +I AR + RH+ V + VN+ S+ Sbjct: 120 KSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|317012201|gb|ADU82809.1| hemolysin [Helicobacter pylori Lithuania75] Length = 235 Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ + A+ V VLVN V+ S+ KEGD IE+ + Sbjct: 1 MRLDYALFNQHLANSREKAKALVLKNQVLVNKMVVSKPSFIVKEGDKIEIVAE------- 53 Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180 A + ++ + + V Sbjct: 54 KLFVSRAGEKLVAFLETHFVDFKGKVV 80 >gi|213409367|ref|XP_002175454.1| 40S ribosomal protein S9-A [Schizosaccharomyces japonicus yFS275] gi|212003501|gb|EEB09161.1| 40S ribosomal protein S9-A [Schizosaccharomyces japonicus yFS275] Length = 190 Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|196000400|ref|XP_002110068.1| S9 ribosomal protein [Trichoplax adhaerens] gi|190588192|gb|EDV28234.1| S9 ribosomal protein [Trichoplax adhaerens] Length = 194 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 + + FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 88 KMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNVPSF 144 >gi|261204665|ref|XP_002629546.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis SLH14081] gi|239587331|gb|EEQ69974.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis SLH14081] gi|239614129|gb|EEQ91116.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis ER-3] gi|327353900|gb|EGE82757.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis ATCC 18188] Length = 191 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|91983753|gb|ABE68880.1| 40S ribosomal protein S9 [Rhizoctonia solani] Length = 176 Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Query: 50 LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 L+L AK + + G+ + + + R + + FLE RL T V+++ Sbjct: 60 LKLEAKDPKRLFEGNALIHRLVRIGVLDENRMRLDYVLALKIEDFLERRLQTQVFKSGLA 119 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSY 133 +I AR + RH+ V + VN+ S+ Sbjct: 120 KSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|225559283|gb|EEH07566.1| 40S ribosomal protein S9 [Ajellomyces capsulatus G186AR] Length = 191 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T VY+ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144 >gi|213402101|ref|XP_002171823.1| 40S ribosomal protein S9 [Schizosaccharomyces japonicus yFS275] gi|211999870|gb|EEB05530.1| 40S ribosomal protein S9 [Schizosaccharomyces japonicus yFS275] Length = 190 Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|313103652|pdb|3IZ6|C Chain C, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 195 Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 3/118 (2%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85 R + R + L L K + + G+ ++ ++ + Sbjct: 41 KRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLA 100 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + +FL RL T+V++A +I AR + RH+ V + VNI S+ + + Sbjct: 101 LTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 158 >gi|115450807|ref|NP_001049004.1| Os03g0154700 [Oryza sativa Japonica Group] gi|115486179|ref|NP_001068233.1| Os11g0602600 [Oryza sativa Japonica Group] gi|77551802|gb|ABA94599.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa Japonica Group] gi|77551804|gb|ABA94601.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa Japonica Group] gi|108706253|gb|ABF94048.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa Japonica Group] gi|108864567|gb|ABG22548.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa Japonica Group] gi|113547475|dbj|BAF10918.1| Os03g0154700 [Oryza sativa Japonica Group] gi|113645455|dbj|BAF28596.1| Os11g0602600 [Oryza sativa Japonica Group] gi|125534929|gb|EAY81477.1| hypothetical protein OsI_36650 [Oryza sativa Indica Group] gi|125577658|gb|EAZ18880.1| hypothetical protein OsJ_34422 [Oryza sativa Japonica Group] gi|149390861|gb|ABR25448.1| 40S ribosomal protein S9 [Oryza sativa Indica Group] gi|215678994|dbj|BAG96424.1| unnamed protein product [Oryza sativa Japonica Group] gi|215692450|dbj|BAG87870.1| unnamed protein product [Oryza sativa Japonica Group] gi|215704252|dbj|BAG93092.1| unnamed protein product [Oryza sativa Japonica Group] gi|215737426|dbj|BAG96556.1| unnamed protein product [Oryza sativa Japonica Group] gi|215737741|dbj|BAG96871.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740779|dbj|BAG96935.1| unnamed protein product [Oryza sativa Japonica Group] gi|218186015|gb|EEC68442.1| hypothetical protein OsI_36651 [Oryza sativa Indica Group] gi|222616230|gb|EEE52362.1| hypothetical protein OsJ_34424 [Oryza sativa Japonica Group] gi|222624211|gb|EEE58343.1| hypothetical protein OsJ_09456 [Oryza sativa Japonica Group] Length = 195 Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 3/118 (2%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85 R + R + L L K + + G+ ++ ++ + Sbjct: 41 KRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLA 100 Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + +FL RL T+V++A +I AR + RH+ V + VNI S+ + + Sbjct: 101 LTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 158 >gi|294949544|ref|XP_002786250.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] gi|239900407|gb|EER18046.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] Length = 188 Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T V++ ++ AR + RH+ V + ++ S+ + Sbjct: 104 KMLERRLQTKVFKLGLAKSVHHARVLIKQRHIRVGKQICDVPSFMVR 150 >gi|66804533|ref|XP_635999.1| ribosomal protein 1024 [Dictyostelium discoideum AX4] gi|131770|sp|P14132|RS9_DICDI RecName: Full=40S ribosomal protein S9; AltName: Full=40S ribosomal protein 1024; AltName: Full=Vegetative-specific protein V12 gi|7353|emb|CAA29844.1| rp1024 protein [Dictyostelium discoideum] gi|60464302|gb|EAL62451.1| ribosomal protein 1024 [Dictyostelium discoideum AX4] Length = 185 Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 ++ + + F+E RL T+V++ +I AR + RH+ V + VN+ S+ + Sbjct: 87 KNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVR 146 Query: 137 EGDVIEVKQKSKQ 149 + S Sbjct: 147 VESQKHLGLASTS 159 >gi|328853943|gb|EGG03078.1| hypothetical protein MELLADRAFT_75362 [Melampsora larici-populina 98AG31] Length = 182 Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 35 GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF------KEADRSRGDTSHNL 88 G G R K + L L ++ + + +K + +F + D + N+ Sbjct: 32 GEFGLRNKREIWRIALTLSKIRRAARELLKLEDKDPKRLFEGNALIRRLDEMDYVLALNI 91 Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 F+E RL T ++++ +I AR + RH+ V + VN+ S+ Sbjct: 92 EDFMERRLQTQLFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 136 >gi|53793731|gb|AAU93594.1| 40S ribosomal protein S9 , putative [Solanum demissum] Length = 197 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++ +I AR + RH+ Sbjct: 85 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGRQVVNVASFMVRVDSQKHI 158 >gi|268679994|ref|YP_003304425.1| hemolysin A [Sulfurospirillum deleyianum DSM 6946] gi|268618025|gb|ACZ12390.1| hemolysin A [Sulfurospirillum deleyianum DSM 6946] Length = 238 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 4/93 (4%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD V+ F + A + + V VNG S+ E D ++V++ S+ ++ Sbjct: 1 MRLDNYVFEKGFAQSRNKASELIKEGSVWVNGNVERKSSFEVCENDKVDVEKISQYVSRA 60 Query: 154 LEASQLAERDVPEY---ISV-NHDNMVATFVRI 182 + D+ + + V + + FV++ Sbjct: 61 GLKLRGFINDLSLHVKGLEVLDIGSSTGGFVQV 93 >gi|242210417|ref|XP_002471051.1| ribosomal protein S9 [Postia placenta Mad-698-R] gi|242217357|ref|XP_002474479.1| 40S ribosomal protein S9 [Postia placenta Mad-698-R] gi|220726394|gb|EED80345.1| 40S ribosomal protein S9 [Postia placenta Mad-698-R] gi|220729841|gb|EED83708.1| ribosomal protein S9 [Postia placenta Mad-698-R] Length = 192 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++A +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKAGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|145487528|ref|XP_001429769.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145546530|ref|XP_001458948.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124396863|emb|CAK62371.1| unnamed protein product [Paramecium tetraurelia] gi|124426770|emb|CAK91551.1| unnamed protein product [Paramecium tetraurelia] Length = 185 Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 28/71 (39%) Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 F + ++ + +E RL T V+++ +I AR + RH V R VN Sbjct: 83 FGLLSEQERKLDYVLGLTTQKMMERRLQTFVFKSNQASSIHHARTLIRQRHFRVGKRLVN 142 Query: 130 IGSYRCKEGDV 140 S+ + Sbjct: 143 SPSFLVRVESE 153 >gi|161669250|gb|ABX75477.1| 40S ribosomal protein S9 [Lycosa singoriensis] Length = 175 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + RH+ V + VN+ S+ + Sbjct: 73 RMKLDYVLGLRVEHFLERRLQTQVFKQGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 132 Query: 137 EGDVIEVKQKSKQ 149 + K Sbjct: 133 LDSEKHIDFSLKS 145 >gi|76573325|gb|ABA46767.1| unknown [Solanum tuberosum] Length = 197 Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FLE RL T+V++ +I AR + RH+ Sbjct: 85 YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VN+ S+ + + Sbjct: 137 RVGRQVVNVASFMVRVDSQKHI 158 >gi|170756305|ref|YP_001780828.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|169121517|gb|ACA45353.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 400 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E+ F++IF++ D ++ E+ + ++ +AKF P+ AR+ V V +NG Sbjct: 314 EENFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397 >gi|168183056|ref|ZP_02617720.1| tyrosine--tRNA ligase [Clostridium botulinum Bf] gi|237794488|ref|YP_002862040.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|182673865|gb|EDT85826.1| tyrosine--tRNA ligase [Clostridium botulinum Bf] gi|229260524|gb|ACQ51557.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 400 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 55 KQKMKKYYG----DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110 K+ ++ Y+G +E F++IF++ D ++ E+ + ++ +AKF P+ Sbjct: 298 KEIVRLYHGKEASTKAEANFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKN 356 Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 AR+ V V +NG V+ CK + ++ K+ +L Sbjct: 357 EARRLVKQGAVKINGEKVDE---ECKVKNEDILQVGKKKFIKIL 397 >gi|281202989|gb|EFA77190.1| ribosomal protein 1024 [Polysphondylium pallidum PN500] Length = 217 Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 16/164 (9%) Query: 2 SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61 S+ + K R K ++ G +G + KS+ L L +K + Sbjct: 27 SRYRAESAKDSRTNSTPRRPFEKERLDNELKIVGEYGLKNKSEVWRVQLALAKIRKSARE 86 Query: 62 YGDISEKKFRSIFK----------------EADRSRGDTSHNLISFLESRLDTIVYRAKF 105 + EK R +F+ ++ + + F+E RL T+V++ Sbjct: 87 LLVLDEKDSRRMFEGASLLRRLHKLGVLEESKNKLDYILNLKVQDFMERRLQTMVFKQGL 146 Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 +I AR + RH+ V + VN+ S+ + + Sbjct: 147 AKSIHHARCLIKGRHIRVGKQLVNVASFLVRVDSQKHIGYHPNS 190 >gi|212721578|ref|NP_001131442.1| hypothetical protein LOC100192774 [Zea mays] gi|195617050|gb|ACG30355.1| 40S ribosomal protein S9 [Zea mays] Length = 193 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FL+ RL TIV++ +I AR + RH+ Sbjct: 85 YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQLVNIPSFMVRVDSEKHI 158 >gi|242050970|ref|XP_002463229.1| hypothetical protein SORBIDRAFT_02g040120 [Sorghum bicolor] gi|241926606|gb|EER99750.1| hypothetical protein SORBIDRAFT_02g040120 [Sorghum bicolor] Length = 194 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FL+ RL TIV++ +I AR + RH+ Sbjct: 85 YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQLVNIPSFMVRVESEKHI 158 >gi|242050962|ref|XP_002463225.1| hypothetical protein SORBIDRAFT_02g040080 [Sorghum bicolor] gi|241926602|gb|EER99746.1| hypothetical protein SORBIDRAFT_02g040080 [Sorghum bicolor] Length = 194 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 62 YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121 YG + E + ++ + + +FL+ RL TIV++ +I AR + RH+ Sbjct: 85 YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136 Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143 V + VNI S+ + + Sbjct: 137 RVGRQLVNIPSFMVRVESEKHI 158 >gi|85707561|ref|ZP_01038631.1| S4 domain protein [Roseovarius sp. 217] gi|85667918|gb|EAQ22809.1| S4 domain protein [Roseovarius sp. 217] Length = 126 Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 ++ RLD +++A+F T A + V+ HV VNG V+ + DV+ Q ++ Sbjct: 6 VKIRLDKWLWQARFFKTRTLAAKEVSAGHVRVNGARVSKPAQAVGPQDVLTFSQATR--V 63 Query: 152 SVLEASQLAERDVPE 166 V+ ++ R P Sbjct: 64 RVVRIVEIGTRRGPA 78 >gi|259417109|ref|ZP_05741028.1| RNA-binding S4 [Silicibacter sp. TrichCH4B] gi|259346015|gb|EEW57829.1| RNA-binding S4 [Silicibacter sp. TrichCH4B] Length = 124 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + R+D ++ A+F T A + V HV VNG + S GDV+ + Sbjct: 7 KMRVDKWLWHARFFKTRSLAAKQVGAGHVRVNGSKASKPSQNVAVGDVLTF--SQRHQVR 64 Query: 153 VLEASQLAERDVPE 166 V+ L+ER P Sbjct: 65 VVRILALSERRGPA 78 >gi|322688777|ref|YP_004208511.1| hypothetical protein BLIF_0590 [Bifidobacterium longum subsp. infantis 157F] gi|320460113|dbj|BAJ70733.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 257 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 RLD ++ + V + A++ + HV V+G ++ S+ K G Sbjct: 14 RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58 >gi|320458888|dbj|BAJ69509.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 257 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 RLD ++ + V + A++ + HV V+G ++ S+ K G Sbjct: 14 RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58 >gi|296453816|ref|YP_003660959.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301] gi|296183247|gb|ADH00129.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301] Length = 257 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 RLD ++ + V + A++ + HV V+G ++ S+ K G Sbjct: 14 RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58 >gi|227546214|ref|ZP_03976263.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622217|ref|ZP_04665248.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133063|ref|YP_004000402.1| rRNA methylase [Bifidobacterium longum subsp. longum BBMN68] gi|317481833|ref|ZP_07940861.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA] gi|322690767|ref|YP_004220337.1| hypothetical protein BLLJ_0577 [Bifidobacterium longum subsp. longum JCM 1217] gi|227213195|gb|EEI81067.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514214|gb|EEQ54081.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517152|emb|CBK70768.1| hemolysin TlyA family protein [Bifidobacterium longum subsp. longum F8] gi|311774055|gb|ADQ03543.1| Putative rRNA methylase [Bifidobacterium longum subsp. longum BBMN68] gi|316916770|gb|EFV38164.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA] gi|320455623|dbj|BAJ66245.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 257 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 RLD ++ + V + A++ + HV V+G ++ S+ K G Sbjct: 14 RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58 >gi|213692730|ref|YP_002323316.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524191|gb|ACJ52938.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 276 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 RLD ++ + V + A++ + HV V+G ++ S+ K G Sbjct: 33 RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 77 >gi|23465615|ref|NP_696218.1| hemolysin-like protein [Bifidobacterium longum NCC2705] gi|23326286|gb|AAN24854.1| hemolysin-like protein with S4 domain found in bacteria and plants [Bifidobacterium longum NCC2705] Length = 280 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 RLD ++ + V + A++ + HV V+G ++ S+ K G Sbjct: 37 RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 81 >gi|46191091|ref|ZP_00206673.1| COG1189: Predicted rRNA methylase [Bifidobacterium longum DJO10A] gi|189439661|ref|YP_001954742.1| putative rRNA methylase [Bifidobacterium longum DJO10A] gi|189428096|gb|ACD98244.1| Putative rRNA methylase [Bifidobacterium longum DJO10A] Length = 257 Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 RLD ++ + V + A++ + HV V+G ++ S+ K G Sbjct: 14 RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58 >gi|5923991|emb|CAB56530.1| v12 [Dictyostelium discoideum] Length = 124 Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 ++ + + F+E RL T+V++ +I AR + RH+ V + VN+ S+ + Sbjct: 26 KNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVR 85 Query: 137 EGDVIEVKQKSKQ 149 + S Sbjct: 86 VESQKHLGLASTS 98 >gi|255710311|gb|ACU30975.1| ribosomal protein S9 [Ochlerotatus triseriatus] Length = 158 Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 3/103 (2%) Query: 50 LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 L L K + + + G+ ++ + + + + FLE RL T V++ Sbjct: 25 LTLEEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 84 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 + AR + RH+ V + VNI S+ + + K Sbjct: 85 KSYHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKS 127 >gi|167042557|gb|ABZ07281.1| putative S4 domain protein [uncultured marine microorganism HF4000_ANIW133F6] gi|167043058|gb|ABZ07769.1| putative S4 domain protein [uncultured marine microorganism HF4000_ANIW141C7] Length = 230 Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 L RL ++VY P++ A+R + H H+ + + + + Y Sbjct: 106 MLARRLQSVVYYRGLAPSMRASRNMIVHGHISIGEQRMTVPGY 148 >gi|84687445|ref|ZP_01015323.1| S4 domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84664603|gb|EAQ11089.1| S4 domain protein [Rhodobacterales bacterium HTCC2654] Length = 134 Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 30/73 (41%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 R D ++ A+F T A + + H+ VNG V S+ GDV+ Q + Sbjct: 18 MRADKWLWHARFFKTRGLATKLIAAGHLRVNGTKVAKASHGIGAGDVLTFPQARRVRVVR 77 Query: 154 LEASQLAERDVPE 166 L+A PE Sbjct: 78 LKALSERRGPAPE 90 >gi|207108316|ref|ZP_03242478.1| hypothetical protein HpylH_01458 [Helicobacter pylori HPKX_438_CA4C1] Length = 35 Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 + F R P + V V ++ L+VE YS+ Sbjct: 2 WKKNKKYGIFTRYPEREEVV---VPIEERLIVELYSK 35 >gi|170084629|ref|XP_001873538.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651090|gb|EDR15330.1| predicted protein [Laccaria bicolor S238N-H82] Length = 193 Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V+++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|164657432|ref|XP_001729842.1| hypothetical protein MGL_2828 [Malassezia globosa CBS 7966] gi|159103736|gb|EDP42628.1| hypothetical protein MGL_2828 [Malassezia globosa CBS 7966] Length = 202 Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 FLE RL T VY++ +I AR + RH+ V + V S+ + Sbjct: 110 DFLERRLQTQVYKSGLARSIHHARVLIFQRHIRVGKQIVTSPSFIVR 156 >gi|187780180|ref|ZP_02996653.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC 15579] gi|187773805|gb|EDU37607.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC 15579] Length = 400 Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E+ F++IF++ D + E+ + ++ +A+F P+ AR+ V V VNG Sbjct: 314 EENFKNIFQQG-NMPEDIDTLEANLDETNIVDLIVKAEFAPSKNEARRLVKQGAVKVNGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKILN 398 >gi|170084631|ref|XP_001873539.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651091|gb|EDR15331.1| predicted protein [Laccaria bicolor S238N-H82] Length = 191 Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V+++ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144 >gi|58267458|ref|XP_570885.1| hypothetical protein CNE02160 [Cryptococcus neoformans var. neoformans JEC21] gi|134111931|ref|XP_775501.1| hypothetical protein CNBE2150 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258160|gb|EAL20854.1| hypothetical protein CNBE2150 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227119|gb|AAW43578.1| hypothetical protein CNE02160 [Cryptococcus neoformans var. neoformans JEC21] Length = 193 Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ ++ AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKLGLAKSVHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|226948471|ref|YP_002803562.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|226843127|gb|ACO85793.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 400 Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E F++IF++ D ++ E+ + ++ +AKF P+ AR+ V V +NG Sbjct: 314 EVNFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397 >gi|326495224|dbj|BAJ85708.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 195 Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 F+E RL T V+++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFMERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|254563752|ref|YP_003070847.1| ribosome-associated RNA-binding protein S4-like protein [Methylobacterium extorquens DM4] gi|254271030|emb|CAX27037.1| putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein [Methylobacterium extorquens DM4] Length = 91 Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+F T A + V+ HV VNG + + GDV+ V + Sbjct: 5 RQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRADAPAKAIHCGDVLTVAAPHGTMLV 64 Query: 153 VLEASQLAERDVPE 166 + PE Sbjct: 65 RVLDLGERRGGAPE 78 >gi|312869508|ref|ZP_07729663.1| S4 domain protein [Lactobacillus oris PB013-T2-3] gi|311094955|gb|EFQ53244.1| S4 domain protein [Lactobacillus oris PB013-T2-3] Length = 260 Score = 38.8 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 D + RLD V A F + A+Q V H V +N V+ + D+I Sbjct: 171 EDWEPLTTTVSSLRLD-AVVAAGFNYSRNRAKQLVEHGQVRLNWEEVDRPDEQVVVHDLI 229 Query: 142 EVKQKSK 148 V+ + Sbjct: 230 SVRHGGR 236 >gi|255326173|ref|ZP_05367259.1| ribosomal RNA large subunit methyltransferase J [Rothia mucilaginosa ATCC 25296] gi|255296627|gb|EET75958.1| ribosomal RNA large subunit methyltransferase J [Rothia mucilaginosa ATCC 25296] Length = 242 Score = 38.8 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 RLD + A FV + A + + V VNG+ S D + V+Q Sbjct: 1 MRLDKYLVEAGFVSSRTLAAKLIAAGDVQVNGKVARKASMLVGPEDTLYVRQ 52 >gi|148379187|ref|YP_001253728.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153933038|ref|YP_001383564.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153936237|ref|YP_001387113.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|148288671|emb|CAL82752.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152929082|gb|ABS34582.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152932151|gb|ABS37650.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 400 Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E F++IF++ D ++ E+ + ++ +AKF P+ AR+ V V +NG Sbjct: 314 EVNFKNIFQQG-NIPEDIDIIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397 >gi|327401288|ref|YP_004342127.1| RNA-binding S4 domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316796|gb|AEA47412.1| RNA-binding S4 domain protein [Archaeoglobus veneficus SNP6] Length = 218 Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD + F T A++ + V VNG V S R IEV+ + + Sbjct: 1 MRLDQFLVSKGFFTTRQKAKEAIKRGFVFVNGVRVTKPSARVSGDAEIEVRCEER 55 >gi|331225191|ref|XP_003325266.1| 40S ribosomal protein S9 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304256|gb|EFP80847.1| 40S ribosomal protein S9 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 192 Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 F+E RL T V+++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFMERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|188584089|ref|YP_001927534.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001] gi|179347587|gb|ACB82999.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001] Length = 91 Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 28/74 (37%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+F T A + V HV VNG + + GDV+ V + Sbjct: 5 RQRLDKWLWFARFARTRSMAARLVTDGHVRVNGTRADAPAKAVHCGDVLTVAAPHGTMLV 64 Query: 153 VLEASQLAERDVPE 166 + PE Sbjct: 65 RVLDLGERRGGAPE 78 >gi|328848137|gb|EGF97386.1| hypothetical protein MELLADRAFT_41264 [Melampsora larici-populina 98AG31] Length = 136 Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 F+E RL T V+++ +I AR + RH+ V + VN+ S+ Sbjct: 47 DFMERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 90 >gi|240141241|ref|YP_002965721.1| putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein [Methylobacterium extorquens AM1] gi|240011218|gb|ACS42444.1| putative ribosome-associated RNA-binding protein S4 paralog, putative heat-shock protein [Methylobacterium extorquens AM1] Length = 91 Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+F T A + V+ HV VNG + + GDV+ V + Sbjct: 5 RQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHGTMLV 64 Query: 153 VLEASQLAERDVPE 166 + PE Sbjct: 65 RVLDLGERRGGAPE 78 >gi|163853789|ref|YP_001641832.1| RNA-binding S4 domain-containing protein [Methylobacterium extorquens PA1] gi|218532733|ref|YP_002423549.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum CM4] gi|163665394|gb|ABY32761.1| RNA-binding S4 domain protein [Methylobacterium extorquens PA1] gi|218525036|gb|ACK85621.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum CM4] Length = 91 Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+F T A + V+ HV VNG + + GDV+ V + Sbjct: 5 RQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHGTMLV 64 Query: 153 VLEASQLAERDVPE 166 + PE Sbjct: 65 RVLDLGERRGGAPE 78 >gi|169845523|ref|XP_001829481.1| 40S ribosomal protein S9 [Coprinopsis cinerea okayama7#130] gi|116509546|gb|EAU92441.1| 40S ribosomal protein S9 [Coprinopsis cinerea okayama7#130] Length = 192 Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKIGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|220921712|ref|YP_002497013.1| RNA-binding S4 domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219946318|gb|ACL56710.1| RNA-binding S4 domain protein [Methylobacterium nodulans ORS 2060] Length = 93 Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 30/74 (40%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+F T A + + HV VNG+ S GDVI V +A Sbjct: 5 RQRLDKWLWFARFAKTRSLAARLIADGHVRVNGQRAEAASKAVAVGDVITVAAAHATMAV 64 Query: 153 VLEASQLAERDVPE 166 + A PE Sbjct: 65 RVLALGERRGPAPE 78 >gi|294900981|ref|XP_002777200.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] gi|239884681|gb|EER09016.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] Length = 181 Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 LE RL T V++ ++ AR + RH+ V + ++ S+ + Sbjct: 104 KMLERRLQTKVFKLGLAKSVHHARVLIKQRHIRVGKQICDVPSFMVR 150 >gi|259503039|ref|ZP_05745941.1| S4 domain-containing protein YlmH [Lactobacillus antri DSM 16041] gi|259168905|gb|EEW53400.1| S4 domain-containing protein YlmH [Lactobacillus antri DSM 16041] Length = 260 Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD V A F + A+Q V H V +N V+ + D+I V+ + Sbjct: 184 RLD-AVVAAGFNYSRNRAKQLVEHGQVRLNWEEVDRPDEQVVVHDLISVRHGGR 236 >gi|71012468|ref|XP_758500.1| 40S ribosomal protein S9 (S7) [Ustilago maydis 521] gi|46098158|gb|EAK83391.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Ustilago maydis 521] Length = 194 Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V+++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKSGLAKSIHHARVLIVQRHIRVGKQIVNVPSF 146 >gi|253748055|gb|EET02423.1| Ribosomal protein S9 [Giardia intestinalis ATCC 50581] Length = 190 Score = 38.4 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 + + RL ++V +K ++ AR + RH+ V GR VNI SY + + Sbjct: 100 GLRIEDIFKRRLQSVVVESKLAKSVHHARNIIKARHISVGGRIVNIPSYMVRISNT 155 >gi|294084642|ref|YP_003551400.1| heat shock protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664215|gb|ADE39316.1| heat shock protein, putative [Candidatus Puniceispirillum marinum IMCC1322] Length = 140 Score = 38.4 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ A+F T A + + + +NG +N G ++ + V+ Sbjct: 14 RLDKWLWYARFFKTRSLATRLIASGKLRLNGEVMNKPHRAVVVGQILTF--VQQNDVRVI 71 Query: 155 EASQLAERDVPE 166 E L +R P Sbjct: 72 EIVALGQRRGPA 83 >gi|300707323|ref|XP_002995874.1| hypothetical protein NCER_101110 [Nosema ceranae BRL01] gi|239605106|gb|EEQ82203.1| hypothetical protein NCER_101110 [Nosema ceranae BRL01] Length = 182 Score = 38.4 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 31/74 (41%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 ++LE L VY A ++ +R + + + G + +Y K + V+ S Sbjct: 108 NYLERTLQYRVYSAGLAKSVHHSRWLITKGQISIQGVVIKRPNYVVKADEEAFVEITSYS 167 Query: 150 LASVLEASQLAERD 163 ++ + ++ ++ Sbjct: 168 WSNNTKITKSQKKK 181 >gi|260434066|ref|ZP_05788037.1| RNA-binding S4 [Silicibacter lacuscaerulensis ITI-1157] gi|260417894|gb|EEX11153.1| RNA-binding S4 [Silicibacter lacuscaerulensis ITI-1157] Length = 123 Score = 38.4 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150 + R+D +++A+F T A + V+ HV VNG + GDV+ Q+ Sbjct: 5 LAKLRIDKWLWQARFFKTRSLAARQVSAGHVRVNGDRAQKPAQTVGPGDVLTFAQERVVR 64 Query: 151 ASVLEASQLAERDVPE 166 +E PE Sbjct: 65 VVRVEILGERRGPAPE 80 >gi|314927283|gb|EFS91114.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium acnes HL044PA1] Length = 257 Score = 38.4 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 4/97 (4%) Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK-- 146 + RLD + A + A + V V VNG V + + D + ++ Sbjct: 8 WQSVHVRLDQALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASDNLVADEEVW 67 Query: 147 -SKQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 S+ +L A VP + ++ F ++ Sbjct: 68 VSRAAYKLLGALDTLGVSVPSKV-LDAGASTGGFTQV 103 >gi|217033347|ref|ZP_03438778.1| hypothetical protein HP9810_9g100 [Helicobacter pylori 98-10] gi|216944288|gb|EEC23713.1| hypothetical protein HP9810_9g100 [Helicobacter pylori 98-10] Length = 235 Score = 38.4 bits (88), Expect = 0.59, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ + A+ V VLVN V+ S+ KE D I +L + Sbjct: 1 MRLDYALFNQHLANSREKAKALVLKNQVLVNNMVVSKPSFMVKESDKI-------ELIAT 53 Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180 A + ++ + + V Sbjct: 54 NLFVSRAGEKLAAFLETHFVDFKGKVV 80 >gi|206889218|ref|YP_002248052.1| hemolysin A [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741156|gb|ACI20213.1| hemolysin A [Thermodesulfovibrio yellowstonii DSM 11347] Length = 246 Score = 38.4 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 ++ RLD ++++ + AR + V+VNG + E I + Sbjct: 1 MKLRLDQLLFKKGITESREKARALIIEGKVIVNGHKIEKPGTMVDENSEITIC 53 >gi|170759521|ref|YP_001786595.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169406510|gb|ACA54921.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 400 Score = 38.4 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E F++IF++ D ++ E + ++ +AKF P+ AR+ V V +NG Sbjct: 314 EGNFKNIFQQG-NIPEDIDTIKVNLDEINIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNENILQVGKKKFIKIL 397 >gi|87198148|ref|YP_495405.1| RNA-binding S4 [Novosphingobium aromaticivorans DSM 12444] gi|87133829|gb|ABD24571.1| RNA-binding S4 [Novosphingobium aromaticivorans DSM 12444] Length = 96 Score = 38.4 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 R+D ++ +F T A+ +V H+ +NGR + S + GDV+ + + +V Sbjct: 1 MRIDKFLWFTRFAGTRNLAQGWVEDGHIRLNGRRIERCSADVRLGDVLVL--PMRSRVTV 58 Query: 154 LEASQLAERDVPE 166 +E L R P Sbjct: 59 IEVLALPARRGPA 71 >gi|157363559|ref|YP_001470326.1| hemolysin A [Thermotoga lettingae TMO] gi|157314163|gb|ABV33262.1| hemolysin A [Thermotoga lettingae TMO] Length = 265 Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 ++ RLD IV K + AR + V+VNG+ C E D I++ + + ++ Sbjct: 1 MKKRLDLIVTERKLAASRSQARDLIKLGRVVVNGKICRKPGTICFEEDEIKLCEPRQYVS 60 Query: 152 SVLEASQLA 160 E + A Sbjct: 61 RGGEKLEKA 69 >gi|70940074|ref|XP_740498.1| 40S ribosomal subunit protein S9 [Plasmodium chabaudi chabaudi] gi|56518255|emb|CAH80038.1| 40S ribosomal subunit protein S9, putative [Plasmodium chabaudi chabaudi] Length = 167 Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 10/123 (8%) Query: 27 VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80 N R + + + + L L K + + G E R + ++ ++ Sbjct: 16 KNKREIWRVQYLLAKIRSAARYLLTLDEKSPKRIFQG---EALLRRMVRQGLLGENEEKL 72 Query: 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140 L LE ++ V++ ++ AR + RH+ V + V+I S+ + Sbjct: 73 DYVLGLTLPKLLERQI-AKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRIDSE 131 Query: 141 IEV 143 + Sbjct: 132 KHI 134 >gi|302673469|ref|XP_003026421.1| 40S ribosomal protein S9 [Schizophyllum commune H4-8] gi|300100103|gb|EFI91518.1| 40S ribosomal protein S9 [Schizophyllum commune H4-8] Length = 193 Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V+++ +I AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|301108221|ref|XP_002903192.1| 40S ribosomal protein S9-1 [Phytophthora infestans T30-4] gi|262097564|gb|EEY55616.1| 40S ribosomal protein S9-1 [Phytophthora infestans T30-4] Length = 192 Score = 38.4 bits (88), Expect = 0.65, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%) Query: 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 N+ LE RL T V++ +I AR + RH+ V + V++ S+ + + Sbjct: 102 NVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHI 158 >gi|294678313|ref|YP_003578928.1| heat shock protein [Rhodobacter capsulatus SB 1003] gi|294477133|gb|ADE86521.1| heat shock protein [Rhodobacter capsulatus SB 1003] Length = 92 Score = 38.4 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 R+D +++A+F + A V V VNG+ + GDV+ + ++ Sbjct: 6 RIRIDKWLWQARFAKSRALAVDLVTAGRVRVNGQKLEKPGRAVGPGDVLTLVLGAEVRVL 65 Query: 153 VLEASQLAERDVPEYISV 170 + A PE +++ Sbjct: 66 RILACGTRRGPAPEAVTL 83 >gi|125536685|gb|EAY83173.1| hypothetical protein OsI_38384 [Oryza sativa Indica Group] Length = 173 Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 9/114 (7%) Query: 29 TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88 R + R + L L K + + G E R + + + G + Sbjct: 41 KRELWRVQYALSRIRNAARHLLTLDEKNPCRIFEG---EALLRRMNRYGLLAEGQNKLDY 97 Query: 89 I------SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + +FL RL T+V++A +I A + RH+ V + VN+ S+ + Sbjct: 98 VLALTAENFLARRLQTLVFKAGMAKSIHHACFLIRQRHIRVGRQIVNVPSFMVR 151 >gi|296115140|ref|ZP_06833781.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC 23769] gi|295978241|gb|EFG84978.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC 23769] Length = 115 Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ A+F + +F+ V +N + + GD++ + ++ V Sbjct: 24 QRLDLWLFHARFARSRNDCAEFIAAGQVRINRQRTVKAHAQVHPGDILTLPAPDRRSVMV 83 Query: 154 LEASQLAER 162 + + A R Sbjct: 84 IRVAGFARR 92 >gi|124088436|ref|XP_001347100.1| 40S ribosomal protein S9 [Paramecium tetraurelia strain d4-2] gi|145474345|ref|XP_001423195.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145505215|ref|XP_001438574.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145507412|ref|XP_001439661.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145544819|ref|XP_001458094.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057489|emb|CAH03473.1| 40S ribosomal protein S9, putative [Paramecium tetraurelia] gi|124390255|emb|CAK55797.1| unnamed protein product [Paramecium tetraurelia] gi|124405746|emb|CAK71177.1| unnamed protein product [Paramecium tetraurelia] gi|124406856|emb|CAK72264.1| unnamed protein product [Paramecium tetraurelia] gi|124425913|emb|CAK90697.1| unnamed protein product [Paramecium tetraurelia] Length = 186 Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 28/71 (39%) Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 F + ++ + +E RL T V+++ +I AR + RH V R VN Sbjct: 83 FGLLSEQERKLDYVLGLTTQKMMERRLQTFVFKSNQASSIHHARTLIRQRHFRVGKRLVN 142 Query: 130 IGSYRCKEGDV 140 S+ + Sbjct: 143 SPSFLVRVESE 153 >gi|321259005|ref|XP_003194223.1| 40S ribosomal protein S9-A [Cryptococcus gattii WM276] gi|317460694|gb|ADV22436.1| 40S ribosomal protein S9-A [Cryptococcus gattii WM276] Length = 192 Score = 38.4 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ ++ AR + RH+ V + VN+ S+ Sbjct: 103 DFLERRLQTQVFKLGLAKSVHHARVLIRQRHIRVGKQIVNVPSF 146 >gi|283458437|ref|YP_003363061.1| putative rRNA methylase [Rothia mucilaginosa DY-18] gi|283134476|dbj|BAI65241.1| predicted rRNA methylase [Rothia mucilaginosa DY-18] Length = 242 Score = 38.4 bits (88), Expect = 0.70, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 23/52 (44%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 RLD + A FV + A + + R V VNG+ S D + V+Q Sbjct: 1 MRLDKYLVEAGFVSSRTLAAKLIAARDVQVNGKVARKASMLVGPEDTLYVRQ 52 >gi|308162918|gb|EFO65285.1| Ribosomal protein S9 [Giardia lamblia P15] Length = 189 Score = 38.0 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 8/81 (9%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 + + RL +++ +K ++ AR + RH+ V G+ VNI SY + Sbjct: 100 GLRIEDIFKRRLQSVIVESKLAKSVHHARNMIKARHISVGGQIVNIPSYMV--------R 151 Query: 145 QKSKQLASVLEASQLAERDVP 165 + ++ + S LA P Sbjct: 152 ISNTSRVAIADTSSLAPNGKP 172 >gi|329765795|ref|ZP_08257361.1| 30S ribosomal protein S4 [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137638|gb|EGG41908.1| 30S ribosomal protein S4 [Candidatus Nitrosoarchaeum limnia SFB1] Length = 189 Score = 38.0 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 L RL T+V + T + ARQ V H H+++ R VNI SY + + + Sbjct: 99 DLLSRRLQTLVTKKLGFKTPYQARQAVIHGHIMIGDRKVNIPSYIVTLEEEKNIHFSPES 158 Query: 150 LAS 152 Sbjct: 159 KIP 161 >gi|260893252|ref|YP_003239349.1| hemolysin A [Ammonifex degensii KC4] gi|260865393|gb|ACX52499.1| hemolysin A [Ammonifex degensii KC4] Length = 276 Score = 38.0 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ + P+ ARQ + VLVNG+ D +EV Sbjct: 5 RRRLDILLVEQGYFPSRERARQAILAGQVLVNGQRAAKPGRMVGPEDRVEV 55 >gi|328907882|gb|EGG27645.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium sp. P08] Length = 245 Score = 38.0 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK---SKQL 150 RLD + A + A + V V VNG V + + D + ++ S+ Sbjct: 1 MRLDQALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASDNLVADEEVWVSRAA 60 Query: 151 ASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 +L A VP + ++ F ++ Sbjct: 61 YKLLGALDTLGVSVPSKV-LDAGASTGGFTQV 91 >gi|45657519|ref|YP_001605.1| pseudouridylate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600758|gb|AAS70242.1| pseudouridylate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 246 Score = 38.0 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 17/106 (16%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE--------GD 139 + LE RL+ + + + H+ +NG+ V R GD Sbjct: 9 FMQHLEIRLNRFLADCGLGS-RRKTEELIQKGHIEINGKRVTNLGTRIDPEIDVVSYLGD 67 Query: 140 VIEVKQKSKQLASVLE--------ASQLAERDVPEYISVNHDNMVA 177 V++ +SK++ + A + E+ + + ++ N Sbjct: 68 VVKPIVESKKILIFNKPIGYLCSHADRFHEKTIFSLLPSDYKNFKI 113 >gi|134298943|ref|YP_001112439.1| hemolysin A [Desulfotomaculum reducens MI-1] gi|134051643|gb|ABO49614.1| hemolysin A [Desulfotomaculum reducens MI-1] Length = 268 Score = 38.0 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%) Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 ++ + RLD + F P+ AR V V V+G V+ ++ K I+V+ Sbjct: 1 MAVTKERLDVYLVNNGFFPSREKARAAVMAGLVFVDGERVDKPGHQVKAEVSIQVQ 56 >gi|322805525|emb|CBZ03089.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 400 Score = 38.0 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E F++IF++ D ++ E+ + ++ +AKF P+ AR+ V V +NG Sbjct: 314 EVNFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIIKAKFAPSKNEARRLVKQGAVKINGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397 >gi|24214991|ref|NP_712472.1| pseudouridylate synthase [Leptospira interrogans serovar Lai str. 56601] gi|24196034|gb|AAN49490.1| pseudouridylate synthase [Leptospira interrogans serovar Lai str. 56601] Length = 246 Score = 38.0 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 17/106 (16%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE--------GD 139 + LE RL+ + + + H+ +NG+ V R GD Sbjct: 9 FMQHLEIRLNRFLADCGLGS-RRKTEELIQKGHIEINGKRVTNLGTRIDPEIDVVSYLGD 67 Query: 140 VIEVKQKSKQLASVLE--------ASQLAERDVPEYISVNHDNMVA 177 V++ +SK++ + A + E+ + + ++ N Sbjct: 68 VVKPIVESKKILIFNKPIGYLCSHADRFHEKTIFSLLPSDYKNFKI 113 >gi|161527832|ref|YP_001581658.1| 30S ribosomal protein S4P [Nitrosopumilus maritimus SCM1] gi|254764603|sp|A9A436|RS4_NITMS RecName: Full=30S ribosomal protein S4P gi|160339133|gb|ABX12220.1| ribosomal protein S4 [Nitrosopumilus maritimus SCM1] Length = 201 Score = 38.0 bits (87), Expect = 0.80, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 L RL TIV + T + ARQ V H H+++ R V+I SY + + + Sbjct: 99 DLLSRRLQTIVTKKLGFKTPYQARQAVIHGHIMIGERKVDIPSYTVTVEEENSIHFAPES 158 Query: 150 LASVLEASQLAERDVPE 166 + + + + + P Sbjct: 159 --KIPQVLEKTKSEAPA 173 >gi|159112220|ref|XP_001706339.1| Ribosomal protein S9 [Giardia lamblia ATCC 50803] gi|157434435|gb|EDO78665.1| Ribosomal protein S9 [Giardia lamblia ATCC 50803] Length = 189 Score = 38.0 bits (87), Expect = 0.80, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 8/81 (9%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 + + RL +++ +K ++ AR + RH+ V G+ VNI SY + Sbjct: 100 GLRIEDIFKRRLQSVIVESKLAKSVHHARNMIKARHISVGGQIVNIPSYMV--------R 151 Query: 145 QKSKQLASVLEASQLAERDVP 165 + ++ + S LA P Sbjct: 152 ISNTSRVAIADTSSLAPNGKP 172 >gi|320449902|ref|YP_004201998.1| ribosomal RNA large subunit methyltransferase J [Thermus scotoductus SA-01] gi|320150071|gb|ADW21449.1| ribosomal RNA large subunit methyltransferase J [Thermus scotoductus SA-01] Length = 244 Score = 38.0 bits (87), Expect = 0.81, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD + + A++ + V V G+ V ++R EG +EV + Sbjct: 1 MRLDRYLVERGLAESREKAQRLIQSGQVKVAGQVVTKPAHRVPEGAQVEVLSPER 55 >gi|209737034|gb|ACI69386.1| 40S ribosomal protein S9 [Salmo salar] Length = 194 Score = 38.0 bits (87), Expect = 0.81, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + + FLE RL T V++ +I AR + R + V + VNI S+ + Sbjct: 91 KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRRIRVRKQVVNIPSFVVR 150 Query: 137 EGDVIEVKQKSKQ 149 + + Sbjct: 151 LDSQKHIDFSLRS 163 >gi|148556441|ref|YP_001264023.1| RNA-binding S4 domain-containing protein [Sphingomonas wittichii RW1] gi|148501631|gb|ABQ69885.1| RNA-binding S4 domain protein [Sphingomonas wittichii RW1] Length = 93 Score = 38.0 bits (87), Expect = 0.81, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ + T A++ H+ ++GR V+ + G+V+ + Sbjct: 1 MRLDKFLWFVRLAKTRTLAQEIAEAGHMRIDGRVVDRAHAAVRIGNVLSFPLHGRVRVIR 60 Query: 154 LEASQLAERDVPE 166 +EA PE Sbjct: 61 IEALPARRGAAPE 73 >gi|269860381|ref|XP_002649912.1| SSU ribosomal protein S4P [Enterocytozoon bieneusi H348] gi|220066672|gb|EED44146.1| SSU ribosomal protein S4P [Enterocytozoon bieneusi H348] Length = 185 Score = 38.0 bits (87), Expect = 0.82, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 35/89 (39%) Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 + + + L +L+ RL ++V ++ I AR + + + + G VN Sbjct: 94 DISKCLKDVLNLELSDYLDRRLQSLVCKSGLARNINHARSLITQKQITIKGNVVNKPGMM 153 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD 163 + + ++ + + + A+++ Sbjct: 154 VRSENEGYIEINPNSCTAGAKKGRYAKKN 182 >gi|294012719|ref|YP_003546179.1| putative RNA-binding protein S4 [Sphingobium japonicum UT26S] gi|292676049|dbj|BAI97567.1| putative RNA-binding protein S4 [Sphingobium japonicum UT26S] Length = 98 Score = 38.0 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%) Query: 83 DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142 D R+D ++ A+ + A++ H+ +NGR + + GD+I Sbjct: 3 DAGLVPAHGPSLRIDKFLWFARLAKSRSVAQKMAEDGHIRLNGRRIERSHSPVRAGDLIT 62 Query: 143 VKQKSKQLASVLEASQLAERDVPE 166 S V+ QL R P Sbjct: 63 FPHPSG--VRVVRILQLPGRRGPA 84 >gi|254477059|ref|ZP_05090445.1| RNA-binding S4 [Ruegeria sp. R11] gi|214031302|gb|EEB72137.1| RNA-binding S4 [Ruegeria sp. R11] Length = 124 Score = 38.0 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + R+D +++A+F T + + V+ H+ +NG ++ + GDV+ Q + Sbjct: 7 KIRIDKWLWQARFFKTRSLSSKLVSGGHLRLNGAKISKPAQNVTIGDVLTFPQGNIIRTV 66 Query: 153 VLEASQLAERDVPE 166 +EA PE Sbjct: 67 RVEALGTRRGPAPE 80 >gi|262202727|ref|YP_003273935.1| hemolysin A [Gordonia bronchialis DSM 43247] gi|262086074|gb|ACY22042.1| hemolysin A [Gordonia bronchialis DSM 43247] Length = 275 Score = 38.0 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 15/38 (39%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 RLD + R + AR V+ V VNG + Sbjct: 6 RLDAELVRRGLARSREHARHLVDSGVVKVNGVVATKPA 43 >gi|225849740|ref|YP_002729974.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1] gi|225645311|gb|ACO03497.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1] Length = 410 Score = 38.0 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 23/59 (38%) Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 L +V++ F P+ AR+ + V ++G + ++ ++ A + Sbjct: 344 LYELVFKTGFAPSKSEARRLIKGGAVKIDGEKFTDPYFEVDLTKEFVLQVGKRKFARIK 402 >gi|295098920|emb|CBK88009.1| tyrosyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 412 Score = 37.6 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%) Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE-GDVIEVKQKS 147 L + + + AR+++ ++VNG + Y + VK S Sbjct: 345 LLETLVESGIASSRREAREWIKGNSIMVNGTKITDPDYMMTPDNHCVCVKNYS 397 >gi|114566130|ref|YP_753284.1| hypothetical protein Swol_0583 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337065|gb|ABI67913.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 270 Score = 37.6 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 RLD+++Y P+ AR + V VNG+ V+ E IE+K Sbjct: 1 MARIRLDSLLYDKALAPSREKARAMILAGEVRVNGQMVDKPGTTVDEEARIELKSH 56 >gi|301353221|ref|YP_003795218.1| ribosomal protein S4 [Proteromonas lacertae] gi|290573169|gb|ADD46356.1| ribosomal protein S4 [Proteromonas lacertae] Length = 490 Score = 37.6 bits (86), Expect = 0.96, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 8/108 (7%) Query: 52 LRAKQKMKKYYGDISEKKFRS-----IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106 L K + Y K+F F E R + N I +R D ++YR F Sbjct: 72 LGVNVKRQFYSLKFISKQFLKKNSGAYFTERLFRRSLYNTNYIY---NRFDLVLYRTGFA 128 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 ++ +ARQ + H +N S+ ++ GD+IE+ K + Sbjct: 129 SSLKSARQLILHGFFFINHISIRNPNFLLSCGDLIEINLKKIYFLPFI 176 >gi|51892979|ref|YP_075670.1| putative rRNA methylase [Symbiobacterium thermophilum IAM 14863] gi|51856668|dbj|BAD40826.1| putative rRNA methylase [Symbiobacterium thermophilum IAM 14863] Length = 257 Score = 37.6 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 RLD + P+ A++ + V VNGR + + + GD IEV Sbjct: 5 RLDVALVSRGHFPSRERAQEAIAAGMVRVNGRVITKPARKVDPGDAIEVT 54 >gi|256379446|ref|YP_003103106.1| hemolysin A [Actinosynnema mirum DSM 43827] gi|255923749|gb|ACU39260.1| hemolysin A [Actinosynnema mirum DSM 43827] Length = 268 Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 17/51 (33%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 RLD + R + A Q V V V G + + + V+ Sbjct: 6 RLDAELVRRGMARSREHASQLVAEGKVTVRGSVATKPATAVELDTALVVRD 56 >gi|240282216|gb|EER45719.1| 40S ribosomal protein S9 [Ajellomyces capsulatus H143] gi|325088355|gb|EGC41665.1| 40S ribosomal protein S9 [Ajellomyces capsulatus H88] Length = 191 Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 FLE RL T V++ +I AR + RH+ V + VN+ S+ Sbjct: 101 DFLERRLQTQVHQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144 >gi|255284126|ref|ZP_05348681.1| hemolysin A [Bryantella formatexigens DSM 14469] gi|255265300|gb|EET58505.1| hemolysin A [Bryantella formatexigens DSM 14469] Length = 284 Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 ++ RLD +V + P+ A+ + VLV+G + E I +K Sbjct: 10 KQMKERLDVLVVQKGLAPSREKAKALIMAGCVLVDGEREDKAGTMFAETVQITLK 64 >gi|11499766|ref|NP_071009.1| hypothetical protein AF2184 [Archaeoglobus fulgidus DSM 4304] gi|2648341|gb|AAB89068.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 208 Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD ++ R F + A++ + VLV+G+ V S I+V Q + Sbjct: 1 MRLDILLVRRGFFSSRSRAKEAIKKGFVLVDGKKVTKPSAEVDFEAEIKVLQPER 55 >gi|161899239|ref|XP_001712846.1| ribosomal protein S9 [Bigelowiella natans] gi|75756339|gb|ABA27234.1| ribosomal protein S9 [Bigelowiella natans] Length = 180 Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150 L RL T+V + K TI AR + H+H+ V + VN S+ ++ + I + + Sbjct: 106 ILSRRLQTVVKQLKLSKTIHEARILIMHKHIQVKNQIVNKPSFLVRKDNEIFISFSLNSI 165 Query: 151 ASVLE 155 L Sbjct: 166 HFNLN 170 >gi|15890001|ref|NP_355682.1| hypothetical protein Atu2752 [Agrobacterium tumefaciens str. C58] gi|15157972|gb|AAK88467.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 138 Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 33/71 (46%) Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 + RLD ++ A+ + A+ ++ HV VNG ++ S+ K GD +++ Sbjct: 5 EQPLESTRQRLDKWLFFARMAKSRSLAQSYIQSGHVKVNGATIRQPSHMLKAGDRLDIGF 64 Query: 146 KSKQLASVLEA 156 + V+++ Sbjct: 65 ERMDKVLVVKS 75 >gi|86451906|gb|ABC97348.1| large subunit ribosomal protein 9 RPS9 [Streblomastix strix] Length = 188 Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%) Query: 85 SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 + F++ RL T+V + K +I AR + H+ + + V + SY + + Sbjct: 95 GLKVQDFMDRRLQTLVLKKKLAKSIHHARLMITQGHIRIGKQIVTVPSYMVRVKSESHID 154 Query: 145 QKSKQ 149 + Sbjct: 155 LSPQS 159 >gi|320093495|ref|ZP_08025392.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 178 str. F0338] gi|319979540|gb|EFW11005.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 178 str. F0338] Length = 277 Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 RLD+ + R + A++ + V ++G V + + + Sbjct: 4 RRLDSELVRRGIARSRGHAQELIESGRVRLDGEVVLKPARQMNPAQAV 51 >gi|290462027|gb|ADD24061.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis] Length = 190 Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (43%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 FL+ RL V+ ++ AR ++ ++ ++VNG V+ + + + ++ K Sbjct: 109 DFLKRRLQNRVFELGLSVSVHQARSYITNKFIMVNGVIVDKPGFIVRMENDGYIELSRKY 168 Query: 150 LASVLE 155 + Sbjct: 169 KKAFRN 174 >gi|163785347|ref|ZP_02179985.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159879385|gb|EDP73251.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 278 Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 23/59 (38%) Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 L +VY+ F + AR+ + V +NG ++ ++ ++ A + Sbjct: 213 LYELVYKLGFASSKSEARRLIKSGAVKINGEKFTDFNFEVDLSKEFVLQVGKRKFARIK 271 >gi|207092280|ref|ZP_03240067.1| hemolysin (tly) [Helicobacter pylori HPKX_438_AG0C1] Length = 235 Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ V + A+ V VLVN V+ S+ KEGD IE+ + Sbjct: 1 MRLDYALFNQHLVSSREKAKALVLENQVLVNKMVVSKPSFIIKEGDKIELIAE------- 53 Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180 A + ++ + + V Sbjct: 54 KLFVSRAGEKLGAFLETHFVDFKGKVV 80 >gi|99080415|ref|YP_612569.1| RNA-binding S4 [Ruegeria sp. TM1040] gi|99036695|gb|ABF63307.1| RNA-binding S4 [Ruegeria sp. TM1040] Length = 124 Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + R+D ++ A+F T A + V HV VNG S GDV+ Q Sbjct: 7 KMRVDKWLWHARFFKTRSLAAKQVGAGHVRVNGSKAAKPSQNVSIGDVLTFPQGH--QVR 64 Query: 153 VLEASQLAERDVPE 166 V+ + L+ER P Sbjct: 65 VVRITSLSERRGPA 78 >gi|254511389|ref|ZP_05123456.1| RNA-binding S4 [Rhodobacteraceae bacterium KLH11] gi|221535100|gb|EEE38088.1| RNA-binding S4 [Rhodobacteraceae bacterium KLH11] Length = 121 Score = 37.2 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 R+D +++A+F T + + V+ HV +NG V + GDV+ ++ V+ Sbjct: 7 RIDKWLWQARFFKTRSLSAKLVSGGHVRLNGNRVLKPAQAVAPGDVLTF--PQGRIVRVV 64 Query: 155 EASQLAERDVPE 166 +L ER P Sbjct: 65 RIEKLGERRGPA 76 >gi|123447382|ref|XP_001312431.1| hypothetical protein [Trichomonas vaginalis G3] gi|121894278|gb|EAX99501.1| hypothetical protein TVAG_139990 [Trichomonas vaginalis G3] Length = 185 Score = 37.2 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 24/46 (52%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 ++ RL T V++ ++ AR V+HRH+ V + VN ++ Sbjct: 101 DLMDRRLQTQVHKCALANSVHHARTLVSHRHISVENQLVNQPAFLV 146 >gi|327404068|ref|YP_004344906.1| hemolysin A [Fluviicola taffensis DSM 16823] gi|327319576|gb|AEA44068.1| hemolysin A [Fluviicola taffensis DSM 16823] Length = 249 Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%) Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 N +E RLD I++ V + + + + VLVNG S+ + I Sbjct: 1 MNYFCTMEERLDKILFDRGLVTSRTRGEELIKNGDVLVNGISIEKPGKKIPVDAKI 56 >gi|323702785|ref|ZP_08114445.1| hemolysin A [Desulfotomaculum nigrificans DSM 574] gi|323532302|gb|EGB22181.1| hemolysin A [Desulfotomaculum nigrificans DSM 574] Length = 268 Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%) Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 ++ + RLD + + + AR V V V+ R V+ Y K ++V+ Sbjct: 1 MAVTKERLDVYLVNHGYFSSREKARAAVMAGLVFVDNRRVDKPGYPVKPDAHVQVQ 56 >gi|302670348|ref|YP_003830308.1| hemolysin TlyA family protein [Butyrivibrio proteoclasticus B316] gi|302394821|gb|ADL33726.1| hemolysin TlyA family protein [Butyrivibrio proteoclasticus B316] Length = 300 Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 24/59 (40%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ P+ A+ + V VNG+ + +E + ++ + L V Sbjct: 7 RLDVLLVNRGLAPSREKAKTLIMAGEVFVNGQREDKPGTTFEESKITSLEVRGDTLPYV 65 >gi|84500893|ref|ZP_00999128.1| S4 domain protein [Oceanicola batsensis HTCC2597] gi|84390960|gb|EAQ03378.1| S4 domain protein [Oceanicola batsensis HTCC2597] Length = 130 Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD +++A+FV + A V HV VNG S+ + GDV+ Q + Sbjct: 9 RLDKWIWQARFVKSRSLAAGLVTGGHVRVNGMRAAKPSHGVQPGDVLTFPQGDR 62 >gi|33863749|ref|NP_895309.1| rRNA methyltransferase [Prochlorococcus marinus str. MIT 9313] gi|33635332|emb|CAE21657.1| FtsJ cell division protein:S4 domain:Hemolysin A [Prochlorococcus marinus str. MIT 9313] Length = 267 Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVL-VNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 + RLD + + A+Q + V NG+ ++ + + ++V+Q + ++ Sbjct: 4 KQRLDLQLLMKGLASSRHQAQQLIRAGKVRDGNGQLLDKPGHEVSQELELQVEQPPRFVS 63 Query: 152 SVLEASQLAERDVP 165 E A R+ P Sbjct: 64 RGGEKLLGALREFP 77 >gi|323358624|ref|YP_004225020.1| rRNA methylase [Microbacterium testaceum StLB037] gi|323274995|dbj|BAJ75140.1| predicted rRNA methylase [Microbacterium testaceum StLB037] Length = 265 Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 4/93 (4%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK----SKQ 149 +RLD + + A Q + V VNGR+V S VIEV S+ Sbjct: 2 TRLDAELAARGLARSRSHATQLIAAGEVSVNGRAVVKASAPVDTDSVIEVASPDHYVSRG 61 Query: 150 LASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 +L A E DV ++++ F ++ Sbjct: 62 AHKLLAALDAFEVDVAGRVALDLGASTGGFTQV 94 >gi|170065226|ref|XP_001867852.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Culex quinquefasciatus] gi|167882304|gb|EDS45687.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Culex quinquefasciatus] Length = 181 Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG--DVIEVKQKS 147 +F RL ++ R+K I A Q + H HV V V ++ D + S Sbjct: 104 TFCRRRLPVVLLRSKMAENISQATQLIEHGHVRVGAEVVKDPAFLVPRTLEDFVTWVDGS 163 Query: 148 KQLASVLEASQL 159 VLE + + Sbjct: 164 AIRKHVLEYNDM 175 >gi|312114758|ref|YP_004012354.1| RNA-binding S4 domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311219887|gb|ADP71255.1| RNA-binding S4 domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 105 Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+FV + A + + + VN + V + K GDV+ Sbjct: 6 EQRLDKWLWHARFVKSRSLAAKLIEEGCIRVNRQRVVKAATCIKCGDVLTASLFGD--VR 63 Query: 153 VLEASQLAERDVPE 166 V+E + ER P Sbjct: 64 VIEIRGIGERRGPP 77 >gi|149916593|ref|ZP_01905107.1| ATP-dependent DNA ligase [Roseobacter sp. AzwK-3b] gi|149809520|gb|EDM69380.1| ATP-dependent DNA ligase [Roseobacter sp. AzwK-3b] Length = 113 Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%) Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159 ++ A+F T + + V+ HV VN V+ ++ GDV+ Q S+ + A Sbjct: 1 MWHARFFKTRGISAKLVSGGHVRVNSEKVSKPAHAVVPGDVLTFPQASRIRVIRIVAIGE 60 Query: 160 AERDVPE 166 PE Sbjct: 61 RRGPAPE 67 >gi|307243246|ref|ZP_07525417.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus stomatis DSM 17678] gi|306493374|gb|EFM65356.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus stomatis DSM 17678] Length = 280 Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 ++ R+D ++ F P+ AR+ + +V V+ + V+ K+ I VK Sbjct: 1 MKKRIDVLLVDMGFFPSREQARRTIMAGNVFVDNQRVDKPGTMVKDDSEILVK 53 >gi|296127781|ref|YP_003635033.1| hemolysin A [Brachyspira murdochii DSM 12563] gi|296019597|gb|ADG72834.1| hemolysin A [Brachyspira murdochii DSM 12563] Length = 240 Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD VY+ + + A+ + V VNG V + + K+ D IEV Q K ++ Sbjct: 1 MRLDEYVYKEGYTESRSKAQDIILAGCVFVNGVKVTAKAQKIKDTDNIEVIQNIKYVSRA 60 Query: 154 LEASQLA 160 + + A Sbjct: 61 GDKLEKA 67 >gi|296393973|ref|YP_003658857.1| hemolysin A [Segniliparus rotundus DSM 44985] gi|296181120|gb|ADG98026.1| hemolysin A [Segniliparus rotundus DSM 44985] Length = 269 Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 17/50 (34%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 +RLD + R + A + V G+ + EG + V Sbjct: 6 TRLDRELVRRGLARSREQAGSLIAQGRVFAGGKLAKKPACAVSEGTEVRV 55 >gi|49147180|ref|YP_025773.1| ribosomal protein S4 [Pseudendoclonium akinetum] gi|33439195|gb|AAQ18732.1| ribosomal protein S4 [Pseudendoclonium akinetum] Length = 420 Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 80 SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139 + +++ LESRLD I+++ +F +I +ARQ + VLVNG S++ GD Sbjct: 356 AYHRPIPKIVNLLESRLDVILWKNQFAGSIKSARQNLRQG-VLVNGGLQKKTSFQALPGD 414 Query: 140 VIEVKQ 145 V + Sbjct: 415 VFTFNK 420 >gi|153939021|ref|YP_001390553.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|152934917|gb|ABS40415.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295318634|gb|ADF99011.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 400 Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E F++IF++ D ++ ++ + ++ +AKF P+ AR+ V V +NG Sbjct: 314 EANFKNIFQQG-NIPEDIDTIKVNLTKTNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397 >gi|222150212|ref|YP_002551169.1| hypothetical protein Avi_4348 [Agrobacterium vitis S4] gi|221737194|gb|ACM38157.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 133 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 31/69 (44%) Query: 86 HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 ++ R+D ++ A+ + A+Q + V VNG+ S + GDV+++ Sbjct: 4 QQPLAGPSQRIDKWLFFARIFKSRTLAQQQIVSGRVRVNGKPGKQPSIIVRPGDVLDITL 63 Query: 146 KSKQLASVL 154 + + V+ Sbjct: 64 PNHDMKLVV 72 >gi|119630155|gb|EAX09750.1| hCG401086, isoform CRA_b [Homo sapiens] Length = 168 Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 10/113 (8%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83 K ++ + G +G + K + L K + + EK R +F+ Sbjct: 22 KPHLDQKLKLIGEYGLQNKCEVWRVKFTLVKIHKAARELLTLDEKDPRRLFE-------- 73 Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + L T V++ +I A + H+ V + VNI + + Sbjct: 74 --GIALLQWLRFLQTQVFKLGLAKSIRHAHVLIQQCHIRVREQVVNILFFTVR 124 >gi|123381003|ref|XP_001298508.1| hypothetical protein [Trichomonas vaginalis G3] gi|121879096|gb|EAX85578.1| hypothetical protein TVAG_259540 [Trichomonas vaginalis G3] Length = 185 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 ++ RL T V++ ++ AR V+HRH+ V + VN ++ + +K Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLVWKESEKNIKSADTS 160 >gi|189485330|ref|YP_001956271.1| putative rRNA methylase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287289|dbj|BAG13810.1| putative rRNA methylase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 250 Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 RLD +++ F T A+ F+ ++ VN + + D IEV+ Sbjct: 9 RLDVLLFEKGFAETRTKAQAFIMSGNIFVNNQIQYRPGTLVGKEDSIEVRN 59 >gi|297161628|gb|ADI11340.1| rRNA methylase [Streptomyces bingchenggensis BCW-1] Length = 295 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 RLD + R + + A Q + V V G+ + + + + V+ Sbjct: 10 RLDAELVRRELARSREHAGQLIAAGRVTVGGQVATKPATQVETSAALVVR 59 >gi|90577965|ref|ZP_01233776.1| tyrosyl-tRNA synthetase [Vibrio angustum S14] gi|90441051|gb|EAS66231.1| tyrosyl-tRNA synthetase [Vibrio angustum S14] Length = 430 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 22/49 (44%) Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L ++ ++ + A+ ++ ++VNG V+ Y + D + + Sbjct: 365 LQQVLVKSGLASSRGQAKTHISSNAIMVNGEKVSEPFYEFTDADKLFGR 413 >gi|89055801|ref|YP_511252.1| RNA-binding S4 [Jannaschia sp. CCS1] gi|88865350|gb|ABD56227.1| heat shock protein Hsp15 [Jannaschia sp. CCS1] Length = 108 Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 31/71 (43%) Query: 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 +D +++A+F T A + V+ HV VN + S + GDV+ Q + ++ Sbjct: 1 MDKWLWQARFFKTRSLAARQVSAGHVRVNATKITKASTQISPGDVLTFPQGNTIRVVKID 60 Query: 156 ASQLAERDVPE 166 A PE Sbjct: 61 ALAKRRGPAPE 71 >gi|170781652|ref|YP_001709984.1| hypothetical protein CMS_1246 [Clavibacter michiganensis subsp. sepedonicus] gi|169156220|emb|CAQ01362.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 290 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 5/95 (5%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV-----KQKS 147 + RLD + + A + + V V+GR V S+R G V+EV Sbjct: 23 DLRLDAALPALGLARSRTHAARLIVDGLVTVDGRGVVKASFRVMPGSVVEVAGTDAYVSR 82 Query: 148 KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 + E +V ++++ F ++ Sbjct: 83 GAHKLIGALDAFPEVEVAGRLALDVGASTGGFTQV 117 >gi|85713777|ref|ZP_01044767.1| RNA-binding S4 [Nitrobacter sp. Nb-311A] gi|85699681|gb|EAQ37548.1| RNA-binding S4 [Nitrobacter sp. Nb-311A] Length = 93 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+ V A V HV VNG + K DV+ ++ Sbjct: 3 RQRLDKWLWHARVVKARTQAAALVEAGHVRVNGTRETSPGHSLKIADVLTIRLDRG--VR 60 Query: 153 VLEASQLAER 162 +L+ + AER Sbjct: 61 ILKVTGFAER 70 >gi|291544840|emb|CBL17949.1| hemolysin TlyA family protein [Ruminococcus sp. 18P13] Length = 261 Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 19/50 (38%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 + RLD+ + + A++ + + VNG S + D I Sbjct: 1 MGMRLDSRLVTLGLASSRARAKELICGGQITVNGVPARKASAEVSDSDEI 50 >gi|332187036|ref|ZP_08388777.1| S4 domain protein [Sphingomonas sp. S17] gi|332013046|gb|EGI55110.1| S4 domain protein [Sphingomonas sp. S17] Length = 107 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 30/74 (40%) Query: 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 T+ + RLD ++ A+ + A+ H ++GR+++ + G ++ Sbjct: 2 TTRAPAALESMRLDRFLWWARIAKSRETAQAMACDGHFRMDGRAIDRAHAPVRIGSILTF 61 Query: 144 KQKSKQLASVLEAS 157 Q + +E+ Sbjct: 62 AQHGQVRVLRVESL 75 >gi|163743578|ref|ZP_02150955.1| RNA-binding S4 [Phaeobacter gallaeciensis 2.10] gi|161383163|gb|EDQ07555.1| RNA-binding S4 [Phaeobacter gallaeciensis 2.10] Length = 123 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 ++ + R+D +++A+F T + + V+ H+ +NG + + GDV+ Q Sbjct: 1 MLVSEKIRIDKWLWQARFFKTRSLSAKMVSGGHLSLNGNKIAKPAQNVSSGDVLTFPQGR 60 Query: 148 KQLASVLEASQLAERDVPE 166 +EA PE Sbjct: 61 IIRTVRIEALGTRRGPAPE 79 >gi|225619185|ref|YP_002720411.1| hemolysin protein [Brachyspira hyodysenteriae WA1] gi|1708222|sp|Q06803|HLYA_TREHY RecName: Full=Hemolysin A gi|296626|emb|CAA43858.1| hemolysin [Brachyspira hyodysenteriae] gi|225214004|gb|ACN82738.1| hemolysin protein [Brachyspira hyodysenteriae WA1] Length = 240 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD V+ + + A+ + V VNG V +++ K+ D IEV Q K ++ Sbjct: 1 MRLDEYVHSEGYTESRSKAQDIILAGCVFVNGVKVTSKAHKIKDTDNIEVVQNIKYVSRA 60 Query: 154 LEASQLA 160 E + A Sbjct: 61 GEKLEKA 67 >gi|330039004|ref|XP_003239760.1| 40S ribosomal protein S9 [Cryptomonas paramecium] gi|327206685|gb|AEA38862.1| 40S ribosomal protein S9 [Cryptomonas paramecium] Length = 185 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 FLE RL TIV+++ ++ AR + RH+ + + V + SY + ++ S+ Sbjct: 103 DFLERRLQTIVFKSHLAKSVHHARTIILQRHISIKDKVVTVPSYLVRVKSQKKISYFSQS 162 >gi|123454657|ref|XP_001315080.1| hypothetical protein [Trichomonas vaginalis G3] gi|121897746|gb|EAY02857.1| hypothetical protein TVAG_173990 [Trichomonas vaginalis G3] Length = 185 Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 24/46 (52%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 ++ RL T V++ ++ AR V+HRH+ V + VN ++ Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 146 >gi|163738511|ref|ZP_02145926.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107] gi|161388432|gb|EDQ12786.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107] Length = 123 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%) Query: 88 LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 ++ + R+D +++A+F T + + V+ H+ +NG + + GDV+ Q Sbjct: 1 MLVSEKIRIDKWLWQARFFKTRSLSAKMVSGGHLSLNGNKIAKPAQNVSSGDVLTFPQGR 60 Query: 148 KQLASVLEASQLAERDVPE 166 +EA PE Sbjct: 61 IIRTVRIEALGTRRGPAPE 79 >gi|260654973|ref|ZP_05860461.1| hemolysin A [Jonquetella anthropi E3_33 E1] gi|260630288|gb|EEX48482.1| hemolysin A [Jonquetella anthropi E3_33 E1] Length = 269 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 RLD + R F T AR ++ VLV GR+V+ + K ++V +S Q Sbjct: 9 RLDRRLVREHFASTDEEARLLISSGLVLVEGRAVDSPDCQVKPTASVKVIGQSSQ 63 >gi|123397501|ref|XP_001301101.1| hypothetical protein [Trichomonas vaginalis G3] gi|123468452|ref|XP_001317444.1| hypothetical protein [Trichomonas vaginalis G3] gi|121882236|gb|EAX88171.1| hypothetical protein TVAG_041350 [Trichomonas vaginalis G3] gi|121900178|gb|EAY05221.1| hypothetical protein TVAG_474000 [Trichomonas vaginalis G3] Length = 185 Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 24/46 (52%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 ++ RL T V++ ++ AR V+HRH+ V + VN ++ Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 146 >gi|123500006|ref|XP_001327744.1| hypothetical protein [Trichomonas vaginalis G3] gi|123509886|ref|XP_001329967.1| hypothetical protein [Trichomonas vaginalis G3] gi|121910678|gb|EAY15521.1| hypothetical protein TVAG_495360 [Trichomonas vaginalis G3] gi|121913018|gb|EAY17832.1| hypothetical protein TVAG_010560 [Trichomonas vaginalis G3] Length = 185 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 24/46 (52%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 ++ RL T V++ ++ AR V+HRH+ V + VN ++ Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 146 >gi|304321305|ref|YP_003854948.1| Hemolysin HlyA [Parvularcula bermudensis HTCC2503] gi|303300207|gb|ADM09806.1| Hemolysin HlyA [Parvularcula bermudensis HTCC2503] Length = 243 Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 5/94 (5%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK-----SK 148 RLD+ + A V + A++ + +V VNG V + D +E + + S+ Sbjct: 1 MRLDSYLVEAGHVRSRERAKKVIGDGYVWVNGVQVRKAGRSLQPTDRVEFRGEDFAYVSR 60 Query: 149 QLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182 +L A + D + + ++ F ++ Sbjct: 61 AAFKLLAALEAFSFDPQDLLCLDIGASTGGFTQV 94 >gi|15611407|ref|NP_223058.1| putative hemolysin [Helicobacter pylori J99] gi|4154865|gb|AAD05917.1| putative hemolysin [Helicobacter pylori J99] Length = 235 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ + A+ V + VLVN V+ S+ KEGD IE+ Sbjct: 1 MRLDYALFNQHLANSREKAKALVLKKQVLVNKMVVSKPSFIVKEGDQIEL 50 >gi|226323040|ref|ZP_03798558.1| hypothetical protein COPCOM_00812 [Coprococcus comes ATCC 27758] gi|225208607|gb|EEG90961.1| hypothetical protein COPCOM_00812 [Coprococcus comes ATCC 27758] Length = 64 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60 M+ K R +G + + R +R K S +GLQLR KQK K Sbjct: 1 MAVNRVPVLKRCRSLGMDPVYLGIDKKSNRQL------KRSNRKMSEYGLQLREKQKAKF 54 Query: 61 YYGDIS 66 YG + Sbjct: 55 IYGVLE 60 >gi|307637053|gb|ADN79503.1| RNA binding methyltransferase [Helicobacter pylori 908] gi|325995645|gb|ADZ51050.1| RNA binding methyltransferase [Helicobacter pylori 2018] gi|325997241|gb|ADZ49449.1| putative hemolysin [Helicobacter pylori 2017] Length = 235 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ + A+ V + VLVN V+ S+ KEGD IE+ Sbjct: 1 MRLDYALFNQHLANSREKAKALVLKKQVLVNKMVVSKPSFIVKEGDQIEL 50 >gi|320011585|gb|ADW06435.1| hemolysin A [Streptomyces flavogriseus ATCC 33331] Length = 271 Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 18/49 (36%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 RLD + R K + A Q + V V G + + + + + Sbjct: 6 RRRLDAELVRRKLARSREHASQLIAAGRVTVGGNTATKPATQVETSAAV 54 >gi|291279336|ref|YP_003496171.1| hemolysin A [Deferribacter desulfuricans SSM1] gi|290754038|dbj|BAI80415.1| hemolysin A [Deferribacter desulfuricans SSM1] Length = 268 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 23/49 (46%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD I+++ + A++ + V+VN ++ + E I++ Sbjct: 5 RLDKILFQRGLAESREKAQRLIMAGLVIVNNEKIDKPGTKIDENAHIKL 53 >gi|168178623|ref|ZP_02613287.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670690|gb|EDT82664.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 400 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 67 EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126 E F++IF++ D ++ E+ + ++ +AKF P+ AR+ V V ++G Sbjct: 314 EANFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKIDGE 372 Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154 V+ CK + ++ K+ +L Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397 >gi|288931952|ref|YP_003436012.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642] gi|288894200|gb|ADC65737.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642] Length = 208 Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD + ++ + + A++ + V VNG+ + S++ K + IEV +K K Sbjct: 1 MRLDEFLKKSGYFKSRSQAKEAIKRGFVKVNGKVITKPSFQVKGSEKIEVAEKGKPRGYY 60 Query: 154 L 154 Sbjct: 61 K 61 >gi|118576780|ref|YP_876523.1| ribosomal protein S4 [Cenarchaeum symbiosum A] gi|152060942|sp|A0RY02|RS4_CENSY RecName: Full=30S ribosomal protein S4P gi|118195301|gb|ABK78219.1| ribosomal protein S4 [Cenarchaeum symbiosum A] Length = 205 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%) Query: 90 SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 L RL TIV + T + ARQ V H H+ ++ R V I SY + ++K Sbjct: 99 DLLGRRLQTIVMKKLGFSTPYQARQAVVHGHITISDRVVTIPSYTVYVEEEGDIK 153 >gi|29832783|ref|NP_827417.1| hypothetical protein SAV_6241 [Streptomyces avermitilis MA-4680] gi|29609903|dbj|BAC73952.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 212 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 R+D+ ++ + V T HV VNG V +Y + GD + ++ ++ V+ Sbjct: 46 RIDSWIWSVRLVKTRSMGATACRGGHVRVNGERV-KPAYAVRVGDEVRLRHAGRERILVV 104 Query: 155 EASQLAERDVP 165 + P Sbjct: 105 KRVIRKRVGAP 115 >gi|58040346|ref|YP_192310.1| heat shock protein [Gluconobacter oxydans 621H] gi|58002760|gb|AAW61654.1| Heat shock protein [Gluconobacter oxydans 621H] Length = 92 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD +Y A+ T V+ + +N + + + GD++ S V Sbjct: 6 QRLDQWLYYARVAKTRPLCAAIVSKGRIRINRQPTSKPHAKLHVGDILTFPAVSGGEVRV 65 Query: 154 LEASQLAERDVPE 166 L ER P Sbjct: 66 WRVLDLGERRGPA 78 >gi|319949193|ref|ZP_08023282.1| hemolysin A [Dietzia cinnamea P4] gi|319437179|gb|EFV92210.1| hemolysin A [Dietzia cinnamea P4] Length = 273 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 21/49 (42%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 RLD + R K + AR ++ V+VNG + + + + I Sbjct: 5 RMRLDAELVRRKMCDSRERARDLIDSGRVVVNGVAATKPATQVEPTTSI 53 >gi|317013804|gb|ADU81240.1| putative hemolysin [Helicobacter pylori Gambia94/24] Length = 235 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ + A+ V + VLVN V+ S+ KEGD IE+ Sbjct: 1 MRLDYALFNQHLANSREKAKALVLKKQVLVNKMVVSKPSFIIKEGDKIEL 50 >gi|103488217|ref|YP_617778.1| RNA-binding S4 [Sphingopyxis alaskensis RB2256] gi|98978294|gb|ABF54445.1| RNA-binding S4 [Sphingopyxis alaskensis RB2256] Length = 116 Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD +++ +F + A+ V H+ ++GR V+ S + G + + + V Sbjct: 10 IRLDKLLWFLRFARSRSIAQAMVAAGHIRLDGRRVSRSSCAVQAGATLVLPVGER--IEV 67 Query: 154 LEASQLAERDVPE 166 + L R P Sbjct: 68 IRLVSLPLRRGPA 80 >gi|328544921|ref|YP_004305030.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum SL003B-26A1] gi|326414663|gb|ADZ71726.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum SL003B-26A1] Length = 247 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 20/56 (35%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + RLD + P+ AR + V V+GR + I + ++ Sbjct: 4 KKRLDQRLVELGLAPSRARARDAILRGTVTVDGRIADKPGLAVGPSAAIAIDDPAR 59 >gi|86137859|ref|ZP_01056435.1| S4 domain protein [Roseobacter sp. MED193] gi|85825451|gb|EAQ45650.1| S4 domain protein [Roseobacter sp. MED193] Length = 124 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + R+D ++ A+F T A + V H+ +NG + + GDV+ + Sbjct: 7 KIRVDKWLWHARFFKTRSLAAKQVGAGHIRLNGSKITKTAQNVTAGDVLTF--PQGRQIR 64 Query: 153 VLEASQLAERDVPE 166 V+E + ER P Sbjct: 65 VVEVVAIGERRGPA 78 >gi|308184163|ref|YP_003928296.1| Pore-forming cytolysin [Helicobacter pylori SJM180] gi|308060083|gb|ADO01979.1| Pore-forming cytolysin [Helicobacter pylori SJM180] Length = 235 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ + A+ V VLVN V+ S+ KEGD IE+ Sbjct: 1 MRLDYALFNQHLANSREKAKALVLKNQVLVNKIVVSKPSFIIKEGDQIEL 50 >gi|148273167|ref|YP_001222728.1| hypothetical protein CMM_1986 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831097|emb|CAN02042.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 292 Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 + RLD + + A + + V V+GR V S+R G V+EV Sbjct: 25 DLRLDAALPALGLARSRTHAARLIADGLVTVDGRGVVKASFRVMPGSVVEV 75 >gi|308274741|emb|CBX31340.1| Uncharacterized protein yqxC [uncultured Desulfobacterium sp.] Length = 250 Score = 36.4 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 + RLD V+ + AR + VLVN + + D + +K+ Sbjct: 5 KKRLDVAVHECGLAQSRQRARSLIMAGKVLVNDNIFDKPGVMISKTDALSLKEP 58 >gi|195953012|ref|YP_002121302.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195932624|gb|ACG57324.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 392 Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 24/57 (42%) Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156 + + F + AR+ ++ + +NG + + + + V+ K A + +A Sbjct: 336 IVKIGFATSNNEARRIISGGGLRINGEKITDPNKEIVVENELRVQVGKKHFAIIKKA 392 >gi|296140085|ref|YP_003647328.1| hemolysin A [Tsukamurella paurometabola DSM 20162] gi|296028219|gb|ADG78989.1| hemolysin A [Tsukamurella paurometabola DSM 20162] Length = 271 Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 RLD + R + AR+ + V VN + + + D + V + Sbjct: 6 RLDAELVRRGMARSREQARELIESGRVTVNKQVARKAANQIDPADPVHVTAVA 58 >gi|222637507|gb|EEE67639.1| hypothetical protein OsJ_25217 [Oryza sativa Japonica Group] Length = 125 Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129 F + + + E +L TIV++ +I AR + H+ V + VN Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKL-TIVFKNGMAKSIHHARVLIRQHHIRVGRQLVN 64 Query: 130 IGSYRCK 136 I S+ + Sbjct: 65 IPSFIVR 71 >gi|326384768|ref|ZP_08206445.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395] gi|326196576|gb|EGD53773.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395] Length = 300 Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 15/38 (39%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132 RLD + R + AR+ + V VNG S Sbjct: 6 RLDAELVRRGLARSREQARELIEAGSVKVNGTPATKAS 43 >gi|297198950|ref|ZP_06916347.1| ribosome-associated heat shock protein [Streptomyces sviceus ATCC 29083] gi|197711124|gb|EDY55158.1| ribosome-associated heat shock protein [Streptomyces sviceus ATCC 29083] Length = 240 Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 R+D+ ++ + T A HV VNG V ++ + GD + V+Q+ + ++ Sbjct: 65 RIDSWIWSVRLAKTRSAGATACRGGHVRVNGERV-KPAHSLRVGDEVRVRQEGWERVVIV 123 Query: 155 EASQLAERDVP 165 + P Sbjct: 124 KRLIRKRVGAP 134 >gi|269926072|ref|YP_003322695.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798] gi|269789732|gb|ACZ41873.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798] Length = 277 Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 RLD ++ + A+ ++ V VNG R + G + VK+ Sbjct: 10 IRLDKLMVELGLASSREKAQALISSGLVTVNGEKARSSDQRVRRGTKVIVKE 61 >gi|307294530|ref|ZP_07574372.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1] gi|306879004|gb|EFN10222.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1] Length = 93 Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 R+D ++ A+ + A++ H+ +NGR + + GD+I S Sbjct: 7 PSLRIDKFLWFARLAKSRSVAQKMAEDGHIRLNGRRIERSHSPVRAGDLITFPHPSG--V 64 Query: 152 SVLEASQLAERDVPE 166 V+ QL R P Sbjct: 65 RVVRILQLPGRRGPA 79 >gi|94497177|ref|ZP_01303749.1| RNA-binding S4 [Sphingomonas sp. SKA58] gi|94423282|gb|EAT08311.1| RNA-binding S4 [Sphingomonas sp. SKA58] Length = 98 Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 29/75 (38%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 R+D ++ A+ + A++ H+ +NGR ++ + GD+I Sbjct: 12 PSLRIDKYLWFARLSKSRSIAQKLAEEGHIRLNGRRIDRAHAPVRAGDLITFPHIESVRV 71 Query: 152 SVLEASQLAERDVPE 166 + A + PE Sbjct: 72 VRVLALPVRRGPAPE 86 >gi|116618583|ref|YP_818954.1| cell division protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097430|gb|ABJ62581.1| Cell division protein, S4-like domain [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 265 Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 1/81 (1%) Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 D N + RLD V A F + A++ + V VN + GDVI Sbjct: 176 NDWEENFLLLSSLRLD-TVISAGFDLSRSGAKKLIEENQVRVNWSEIAKPDVELAIGDVI 234 Query: 142 EVKQKSKQLASVLEASQLAER 162 V++ + +L+ + Sbjct: 235 SVRKHGRVQIKLLDGISKKGK 255 >gi|254779055|ref|YP_003057160.1| Pore-forming cytolysin [Helicobacter pylori B38] gi|254000966|emb|CAX28910.1| Pore-forming cytolysin [Helicobacter pylori B38] Length = 235 Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ + A+ V VLVN V+ S+ KEGD IE+ Sbjct: 1 MRLDYALFNQHLANSREKAKALVLKNQVLVNKMVVSKPSFIVKEGDQIEL 50 >gi|315107243|gb|EFT79219.1| S4 domain protein [Propionibacterium acnes HL030PA1] gi|327331109|gb|EGE72849.1| S4 domain protein [Propionibacterium acnes HL097PA1] Length = 71 Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 3/72 (4%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RL + A T AR+ + V VNG+ + GD + V + V Sbjct: 2 IRLGQYLKFANLAETGGQARELIASGMVSVNGKVETRRGRQLHPGDEVTVTNGGQT---V 58 Query: 154 LEASQLAERDVP 165 L E DVP Sbjct: 59 TATVDLTEPDVP 70 >gi|218437902|ref|YP_002376231.1| hemolysin A [Cyanothece sp. PCC 7424] gi|218170630|gb|ACK69363.1| hemolysin A [Cyanothece sp. PCC 7424] Length = 270 Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK---- 146 + RLD ++ + A++ + V VN + ++ G I+++ K Sbjct: 1 MAKQRLDNLLVTLNLCSSRQLAQRLIRAGEVRVNQQIIDKPGTEVDPGAEIQLQAKPLYV 60 Query: 147 SKQLASVLEASQLAERDV 164 S+ + +A + + V Sbjct: 61 SRGGEKLKKAIEFFKIPV 78 >gi|50842085|ref|YP_055312.1| hypothetical protein PPA0599 [Propionibacterium acnes KPA171202] gi|50839687|gb|AAT82354.1| conserved protein [Propionibacterium acnes KPA171202] Length = 76 Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 3/72 (4%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RL + A T AR+ + V VNG+ + GD + V + V Sbjct: 7 IRLGQYLKFANLAETGGQARELIASGMVSVNGKVETRRGRQLHPGDEVTVTNGGQT---V 63 Query: 154 LEASQLAERDVP 165 L E DVP Sbjct: 64 TATVDLTEPDVP 75 >gi|209551387|ref|YP_002283304.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537143|gb|ACI57078.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 134 Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 R+D ++ A+ V + A+ V HV VNG S K GD IE+ + + + Sbjct: 12 RQRIDKWLFFARMVKSRSLAQSHVQSGHVRVNGERCKHPSQMVKPGDRIELTLERRDVVL 71 Query: 153 VL 154 V+ Sbjct: 72 VM 73 >gi|90422070|ref|YP_530440.1| RNA-binding S4 [Rhodopseudomonas palustris BisB18] gi|90104084|gb|ABD86121.1| RNA-binding S4 [Rhodopseudomonas palustris BisB18] Length = 89 Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 27/71 (38%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+ V +A V HV VNG + K GDV+ V Sbjct: 3 RQRLDKWLWHARVVKARTSAAALVEAGHVRVNGGRQTAPGHLLKRGDVLTVSLDRTVRLL 62 Query: 153 VLEASQLAERD 163 +EA D Sbjct: 63 KVEAFAARRGD 73 >gi|95929505|ref|ZP_01312248.1| hemolysin A [Desulfuromonas acetoxidans DSM 684] gi|95134621|gb|EAT16277.1| hemolysin A [Desulfuromonas acetoxidans DSM 684] Length = 250 Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 22/56 (39%) Query: 89 ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 +S + RLD V + AR + +VLVN ++ R I V+ Sbjct: 1 MSATKERLDKRVVELGLCRSRERARALIMSGNVLVNETVIDKAGTRVAVDAAIRVR 56 >gi|147677355|ref|YP_001211570.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146273452|dbj|BAF59201.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 407 Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 70 FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA----KFVPTIFAARQFVNHRHVLVNG 125 F+ +F++ D + + + + R + AR+ + V ++G Sbjct: 317 FKRVFQQKDLPDELPGFKVTAGMLEDGAIWLPRLMAMAGLAGSTSEARRLIQQGGVKIDG 376 Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 R V +Y K G + ++ ++ A ++ Sbjct: 377 RKVEDPNYSLKAGSDMVIQVGKRRFARII 405 >gi|271967338|ref|YP_003341534.1| hemolysin A [Streptosporangium roseum DSM 43021] gi|270510513|gb|ACZ88791.1| hemolysin A [Streptosporangium roseum DSM 43021] Length = 272 Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 19/49 (38%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 +RLD+ + R K + A Q + V V G+ + + I Sbjct: 4 RTRLDSELVRRKLARSREQAAQLIEAGRVSVGGQLAAKPATQVDTASAI 52 >gi|225849728|ref|YP_002729962.1| hemolysin A [Persephonella marina EX-H1] gi|225646217|gb|ACO04403.1| hemolysin A [Persephonella marina EX-H1] Length = 272 Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 R+D ++ V + A++ + V VN + V+ + I +K+K K Sbjct: 6 RIDKLLVERGLVESREKAQRLIMAGCVFVNDQRVDKPGTKIPVDANIFLKEKEK 59 >gi|160948202|emb|CAO94702.1| putative ribosomal protein S9 [Pomphorhynchus laevis] Length = 174 Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 21/153 (13%) Query: 18 NLWGRPKSPVNTRSYGP-----GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72 ++ P+ P G +G R K + L +K + + EK R Sbjct: 8 KVYTTPRRPFEKERLDQELRLVGEYGLRNKKELWRVKFALAHIRKTARILLTLEEKDPRR 67 Query: 73 IFK----------------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116 +F+ + S FL RL T+V + +I AR + Sbjct: 68 LFQGNALLRRLVRMGILDENRMKLDYVLSLKPQDFLNRRLQTLVLQRGLAKSIHHARVLI 127 Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 RH+ V + VN+ S+ + + + Sbjct: 128 RQRHIRVRKQVVNVPSFIVRIDSEKHIDLSLRS 160 >gi|239978725|ref|ZP_04701249.1| putative rRNA methylase [Streptomyces albus J1074] Length = 268 Score = 35.7 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 16/44 (36%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 RLD + R K + A Q + V V G + + + Sbjct: 1 MARRRLDAELVRRKLARSREHASQLIAAGRVTVGGATATKPATQ 44 >gi|258654197|ref|YP_003203353.1| hemolysin A [Nakamurella multipartita DSM 44233] gi|258557422|gb|ACV80364.1| hemolysin A [Nakamurella multipartita DSM 44233] Length = 272 Score = 35.7 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 20/53 (37%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 SRLD + R + A +F+ VLV G+ S + V+ Sbjct: 3 RSRLDAELVRRGHARSRAEAAEFIAAGRVLVAGQVATKPSTAVDPAVALLVRD 55 >gi|86747675|ref|YP_484171.1| RNA-binding S4 [Rhodopseudomonas palustris HaA2] gi|86570703|gb|ABD05260.1| RNA-binding S4 [Rhodopseudomonas palustris HaA2] Length = 89 Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+ V A V HV VNG + K GDV+ + + Sbjct: 3 RQRLDKWLWHARIVRARSTAAALVESGHVRVNGVREKSPGHGIKTGDVVTIALD--RSVR 60 Query: 153 VLEASQLAER 162 VL+ AER Sbjct: 61 VLKVIGFAER 70 >gi|16804067|ref|NP_465552.1| hypothetical protein lmo2028 [Listeria monocytogenes EGD-e] gi|224501171|ref|ZP_03669478.1| hypothetical protein LmonFR_01400 [Listeria monocytogenes FSL R2-561] gi|254827084|ref|ZP_05231771.1| S4 domain-containing protein [Listeria monocytogenes FSL N3-165] gi|254831730|ref|ZP_05236385.1| hypothetical protein Lmon1_10263 [Listeria monocytogenes 10403S] gi|255016669|ref|ZP_05288795.1| hypothetical protein LmonF_00281 [Listeria monocytogenes FSL F2-515] gi|255026556|ref|ZP_05298542.1| hypothetical protein LmonocytFSL_09855 [Listeria monocytogenes FSL J2-003] gi|16411498|emb|CAD00106.1| lmo2028 [Listeria monocytogenes EGD-e] gi|258599467|gb|EEW12792.1| S4 domain-containing protein [Listeria monocytogenes FSL N3-165] Length = 258 Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + + ++ RLD I+ A Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETELTNAVYAP----VIWEEMGLTVSSMRLDVIISNAH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|123431013|ref|XP_001308019.1| S4 domain containing protein [Trichomonas vaginalis G3] gi|121889677|gb|EAX95089.1| S4 domain containing protein [Trichomonas vaginalis G3] Length = 83 Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 ++ RL T V++ ++ AR V+HRH+ V + VN ++ Sbjct: 1 MDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 44 >gi|227431973|ref|ZP_03913993.1| ribosomal protein S4e [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352258|gb|EEJ42464.1| ribosomal protein S4e [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 265 Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 1/81 (1%) Query: 82 GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 D N + RLD V A F + A++ + V VN + GDVI Sbjct: 176 NDWEENFLLLSSLRLD-TVISAGFDLSRSGAKKLIEENQVRVNWSEIVKPDAELAIGDVI 234 Query: 142 EVKQKSKQLASVLEASQLAER 162 V++ + +L+ + Sbjct: 235 SVRKHGRVQIKLLDGISKKGK 255 >gi|284802475|ref|YP_003414340.1| hypothetical protein LM5578_2231 [Listeria monocytogenes 08-5578] gi|284995617|ref|YP_003417385.1| hypothetical protein LM5923_2182 [Listeria monocytogenes 08-5923] gi|284058037|gb|ADB68978.1| hypothetical protein LM5578_2231 [Listeria monocytogenes 08-5578] gi|284061084|gb|ADB72023.1| hypothetical protein LM5923_2182 [Listeria monocytogenes 08-5923] Length = 259 Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + + ++ RLD I+ A Sbjct: 141 KDYLTLQLEKIGKVNVM---LEETELTNAVYAP----VIWEEMGLTVSSMRLDVIISNAH 193 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 194 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 236 >gi|89069368|ref|ZP_01156727.1| S4 domain protein [Oceanicola granulosus HTCC2516] gi|89045135|gb|EAR51206.1| S4 domain protein [Oceanicola granulosus HTCC2516] Length = 128 Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD +++A+F + A + V + V V+G+ V+ + GDV+ Q Sbjct: 8 IRLDKWLWQARFFKSRSLAAEIVGNGRVRVDGQPVSKPARAVGAGDVLTFPQGQAVRVVR 67 Query: 154 LEASQLAERDVPE 166 + A PE Sbjct: 68 ILALGTRRGPAPE 80 >gi|329895164|ref|ZP_08270848.1| Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit [gamma proteobacterium IMCC3088] gi|328922478|gb|EGG29819.1| Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit [gamma proteobacterium IMCC3088] Length = 130 Score = 35.7 bits (81), Expect = 3.8, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ A+F T +Q + V VNG+ V + S GD I V+Q V+ Sbjct: 5 RLDKWLWAARFYKTRSLCKQAIEGGKVHVNGQRVKV-SKDVIVGDEIRVRQGYDDRDIVV 63 Query: 155 EASQLAERDVPE 166 A + PE Sbjct: 64 LALSDQRKGAPE 75 >gi|307328948|ref|ZP_07608117.1| hemolysin A [Streptomyces violaceusniger Tu 4113] gi|306885458|gb|EFN16475.1| hemolysin A [Streptomyces violaceusniger Tu 4113] Length = 303 Score = 35.7 bits (81), Expect = 3.8, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 17/47 (36%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 RLD + R K + A Q + V V G + + + + Sbjct: 10 RLDAELVRRKLARSREHASQLIAAGRVTVGGAVATKPATQVETSAAV 56 >gi|300869762|ref|YP_003784633.1| hemolysin A [Brachyspira pilosicoli 95/1000] gi|300687461|gb|ADK30132.1| hemolysin A [Brachyspira pilosicoli 95/1000] Length = 240 Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD V+ + + A+ + V VNG V + + K+ D IEV Q K ++ Sbjct: 1 MRLDEYVHHNGYTESRSKAQDIILAGCVFVNGVKVTSKAQKIKDTDKIEVIQNRKYVSRA 60 Query: 154 LEASQLA 160 E + A Sbjct: 61 GEKLEKA 67 >gi|292492716|ref|YP_003528155.1| RNA-binding S4 domain protein [Nitrosococcus halophilus Nc4] gi|291581311|gb|ADE15768.1| RNA-binding S4 domain protein [Nitrosococcus halophilus Nc4] Length = 131 Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + RLD ++ A+F T A + VN V +NGR V S R GD + +++ + Sbjct: 8 KIRLDKWLWAARFFKTRSLAVEAVNGGKVHLNGRRV-KPSQRVAIGDHLTIRRGQFEYEI 66 Query: 153 VLEASQLAERDVPE 166 +E R PE Sbjct: 67 TIEGLSQQRRPAPE 80 >gi|186685337|ref|YP_001868533.1| hemolysin A [Nostoc punctiforme PCC 73102] gi|186467789|gb|ACC83590.1| hemolysin A [Nostoc punctiforme PCC 73102] Length = 272 Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 + RLDT++ + A++ + V VN + V+ I +K++S Sbjct: 1 MAKQRLDTLLVELNLCSSRALAQRLIQAGEVTVNQQLVDKPGTEVDISAQINIKERS 57 >gi|322800724|gb|EFZ21628.1| hypothetical protein SINV_05339 [Solenopsis invicta] Length = 752 Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 10/175 (5%) Query: 34 PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93 P + ++ +++ +Q ++ ++ E KF + K+ T + L Sbjct: 538 PQQLEKSIQAFETFYHMQFSGRKLTWLHHLSQGELKF-NYLKKPYLVTVQTYQMALLLLF 596 Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 D I + + Q V H LV+ + +N + E D I S Sbjct: 597 EHCDAIPCKEAAASLRLSHDQLVKHAASLVDCKILNKSNDGELEEDTILTLNFSYSNKRT 656 Query: 154 L-EASQLAERDVP-----EYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNL 199 + + +RD P + SV+ D + A VRI S K + + ++Q L Sbjct: 657 KFRVTGVLQRDAPQDAEATHRSVDEDRKMFLQAAIVRIMKSRKLLRHNQLIQEVL 711 >gi|85712731|ref|ZP_01043776.1| Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit [Idiomarina baltica OS145] gi|85693463|gb|EAQ31416.1| Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit [Idiomarina baltica OS145] Length = 131 Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ A+F T ARQ V V V G+ + S + GD I ++Q + Sbjct: 8 RLDKWLWAARFYKTRALARQMVQSGKVHVAGKR-SKPSKLVQIGDRITLRQGFDSKEVEV 66 Query: 155 EASQLAERDVPE 166 R PE Sbjct: 67 LGLSEQRRGAPE 78 >gi|328952109|ref|YP_004369443.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328452433|gb|AEB08262.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 406 Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 41/107 (38%), Gaps = 6/107 (5%) Query: 52 LRAKQKMKKYYGDISE---KKFRSIFKEADRSRGDTSHNLISFLESR--LDTIVYRAKFV 106 L + + + +E ++F ++F+E + ++ E+ L ++++A Sbjct: 295 LAKEMVARYHSPGAAEEAARQFAAVFREGA-LPEEIEEICLAVTENSIWLPKVLHQAGLA 353 Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 AR+ + V V+G V+ G ++ ++ V Sbjct: 354 AGTSEARRLIQQGGVQVDGEKVSSVELELPVGQTYLLRVGKRKFKKV 400 >gi|300741214|ref|ZP_07071235.1| ribosomal RNA large subunit methyltransferase J [Rothia dentocariosa M567] gi|300380399|gb|EFJ76961.1| ribosomal RNA large subunit methyltransferase J [Rothia dentocariosa M567] Length = 244 Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 1/78 (1%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD + + A + ++ V VNG+ V S D + V++ Sbjct: 1 MRLDKFLAEHGLAASRTLAAKLIDAGCVSVNGKIVYKASQPVHRDDDVLVQESPLTEYVS 60 Query: 154 LEASQLAER-DVPEYISV 170 +LA D+ +I+V Sbjct: 61 RAGHKLAGALDIFTHITV 78 >gi|237785442|ref|YP_002906147.1| hypothetical protein ckrop_0850 [Corynebacterium kroppenstedtii DSM 44385] gi|237758354|gb|ACR17604.1| hypothetical protein ckrop_0850 [Corynebacterium kroppenstedtii DSM 44385] Length = 276 Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 18/46 (39%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138 RLD + K + A + + V+VNG + R + G Sbjct: 7 RRRLDAELVNRKVARSRDQAVEMIRSGRVMVNGFQATKPATRVEPG 52 >gi|169334432|ref|ZP_02861625.1| hypothetical protein ANASTE_00832 [Anaerofustis stercorihominis DSM 17244] gi|169259149|gb|EDS73115.1| hypothetical protein ANASTE_00832 [Anaerofustis stercorihominis DSM 17244] Length = 267 Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 22/52 (42%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 RLD +++ + + A++ + V VN + V+ + I +K Sbjct: 6 RLDVLLFESGMAESREKAKRLIMAGVVFVNDQRVDKAGTKVDIYSNIIIKGN 57 >gi|170750105|ref|YP_001756365.1| RNA-binding S4 domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656627|gb|ACB25682.1| RNA-binding S4 domain protein [Methylobacterium radiotolerans JCM 2831] Length = 102 Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 28/74 (37%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+F T A + + V VNG + GDV+ V LA Sbjct: 5 RQRLDKWLWFARFARTRSLAARLASDGFVRVNGSRAENPAKAIGVGDVVTVAAPHATLAV 64 Query: 153 VLEASQLAERDVPE 166 + L PE Sbjct: 65 RVLGLGLRRGPAPE 78 >gi|303389425|ref|XP_003072945.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis ATCC 50506] gi|303302088|gb|ADM11585.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis ATCC 50506] Length = 180 Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135 + + T + SF E RL ++ R + VP A +FV H HV + + V S Sbjct: 88 KNRKLVDCTKVTVSSFCERRLPMVMKRIRMVPNFKDATRFVEHGHVRLGSKVVYDPSTII 147 Query: 136 KEGDV--IEVKQKSKQLASVLEASQLAE 161 + + +SK + E + +A+ Sbjct: 148 SKAMEDFVSWVDESKIKKKIDEFNGVAD 175 >gi|116254343|ref|YP_770181.1| heat shock protein 15 [Rhizobium leguminosarum bv. viciae 3841] gi|115258991|emb|CAK10100.1| putative heat shock protein 15 [Rhizobium leguminosarum bv. viciae 3841] Length = 134 Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 R+D ++ A+ + A+ + HV +NG + S K GD IE+ + + + Sbjct: 12 RQRIDKWLFFARMAKSRSVAQSHIQSGHVRINGERCSYPSQMVKPGDRIELTLERRDVVL 71 Query: 153 VL 154 V+ Sbjct: 72 VV 73 >gi|291450616|ref|ZP_06590006.1| rRNA methylase [Streptomyces albus J1074] gi|291353565|gb|EFE80467.1| rRNA methylase [Streptomyces albus J1074] Length = 271 Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 16/42 (38%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 RLD + R K + A Q + V V G + + + Sbjct: 6 RRRLDAELVRRKLARSREHASQLIAAGRVTVGGATATKPATQ 47 >gi|323341676|ref|ZP_08081909.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464101|gb|EFY09294.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 420 Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 11/82 (13%) Query: 63 GDISE---KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119 G++ E ++ R +F ++ N++ + K P+ ARQ + Sbjct: 326 GNVQELTVEQIRQVFADSASIEVSADENIVEL--------LVNTKVCPSKREARQLIEGG 377 Query: 120 HVLVNGRSVNIGSYRCKEGDVI 141 + VNG VN + + + I Sbjct: 378 AIRVNGEVVNDTDFVISKDNAI 399 >gi|256846979|ref|ZP_05552425.1| RNA-binding S4 domain-containing protein [Lactobacillus coleohominis 101-4-CHN] gi|256715643|gb|EEU30618.1| RNA-binding S4 domain-containing protein [Lactobacillus coleohominis 101-4-CHN] Length = 261 Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 2/81 (2%) Query: 69 KFRSIFK-EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127 +F I + + D I+ RLD ++ A F + A+ + H V VN Sbjct: 158 QFERISQDKLVLPDDDWEKVSITVPSLRLDAVIANA-FNYSRNRAKAAIEHGLVRVNWEE 216 Query: 128 VNIGSYRCKEGDVIEVKQKSK 148 ++ Y+ D+I V+ + Sbjct: 217 IDRPDYQMAIHDLISVRHGGR 237 >gi|302533667|ref|ZP_07286009.1| rRNA methylase [Streptomyces sp. C] gi|302442562|gb|EFL14378.1| rRNA methylase [Streptomyces sp. C] Length = 271 Score = 35.3 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 17/49 (34%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 RLD + R + A Q + V V G + + + + + Sbjct: 6 RRRLDAELVRRSMARSREHAAQLIAAGRVTVGGTTATKPATQVETSAAL 54 >gi|153828323|ref|ZP_01980990.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148876153|gb|EDL74288.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 127 Score = 35.3 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 9 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 67 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 68 IIEKISDQRRGAPE 81 >gi|189342242|gb|ACD91700.1| ribosomal protein S4 [Cousinia macilenta] Length = 45 Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 9/26 (34%) Query: 1 MSKRESSKHKIDRRIGENLWGRPKSP 26 MS+ + K +G K P Sbjct: 1 MSRYRGPRFKKIXHLGALPGLSNKRP 26 >gi|284161758|ref|YP_003400381.1| RNA-binding S4 domain protein [Archaeoglobus profundus DSM 5631] gi|284011755|gb|ADB57708.1| RNA-binding S4 domain protein [Archaeoglobus profundus DSM 5631] Length = 209 Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD ++ + + A++ + R V+VNG+ V SY I V Q+ K Sbjct: 1 MRLDRLLVIKGYFSSRQKAKEAIRRRFVIVNGKVVTKPSYDVDFDVEIRVLQEEK 55 >gi|1086212|pir||S51055 ribosomal protein S4 - Thermus aquaticus (fragment) Length = 26 Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 4/21 (19%), Positives = 9/21 (42%) Query: 3 KRESSKHKIDRRIGENLWGRP 23 + ++ RR G L+ + Sbjct: 2 RYIGPVCRLSRREGVKLYLKG 22 >gi|327485203|gb|AEA79610.1| Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Vibrio cholerae LMA3894-4] Length = 125 Score = 35.3 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 7 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 65 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 66 IIEKISDQRRGAPE 79 >gi|296133365|ref|YP_003640612.1| tyrosyl-tRNA synthetase [Thermincola sp. JR] gi|296031943|gb|ADG82711.1| tyrosyl-tRNA synthetase [Thermincola potens JR] Length = 407 Score = 35.3 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 67 EKKFRSIFKEADRSRGDTSH----NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 E++F+SIF++ + + N + E L ++ A V + R+ V V Sbjct: 315 EEEFKSIFQKKELPDEIPEYVLDKNQLEEGEIWLPKLMALAGLVSSSSEGRRLVIQGGVR 374 Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 VN + V + + + + + +K ++ ++ Sbjct: 375 VNDKKVVDPAAKVQPENGMIIKAGKRKFVKIV 406 >gi|117926972|ref|YP_867589.1| RNA-binding S4 domain-containing protein [Magnetococcus sp. MC-1] gi|117610728|gb|ABK46183.1| heat shock protein Hsp15 [Magnetococcus sp. MC-1] Length = 130 Score = 35.3 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 R+D ++ A+F T A VN HV +NG+ + S++ K GD +E+ + Q A V+ Sbjct: 10 RIDKWLWAARFFKTRALATDAVNGGHVHLNGQRI-KASHQVKVGDRLEITKGPVQFALVI 68 Query: 155 EASQLAERDVPE 166 E P Sbjct: 69 EGLHDKRGPAPA 80 >gi|326565308|gb|ADZ95652.1| 40S ribosomal protein S9 [Nosema bombycis] Length = 187 Score = 35.3 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 LE L VY ++ AR + + + + G VN + K + + Sbjct: 110 LERTLQFRVYANGLGKSVHHARWLIKRKQISIKGVVVNTPNRIIKAEEEAFI 161 >gi|237668428|ref|ZP_04528412.1| hemolysin A [Clostridium butyricum E4 str. BoNT E BL5262] gi|237656776|gb|EEP54332.1| hemolysin A [Clostridium butyricum E4 str. BoNT E BL5262] Length = 270 Score = 35.3 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 3/80 (3%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ + + A+ + V VNG+ V+ + IE + L V Sbjct: 7 RLDILLVEKGIITSREKAKACIMEGRVYVNGQKVDKAGEKVGVDSDIEYRGD--TLKYVS 64 Query: 155 EASQLAERDVPEY-ISVNHD 173 E+ + + ++++ Sbjct: 65 RGGLKLEKAMATWDLTLDDK 84 >gi|325295697|ref|YP_004282211.1| hemolysin A [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066145|gb|ADY74152.1| hemolysin A [Desulfurobacterium thermolithotrophum DSM 11699] Length = 265 Score = 35.3 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 RLD ++ V + A+ + VLVNG+ V+ VIE+K Sbjct: 6 RLDKLLVEKGLVKSRERAKALIMAGKVLVNGQVVDKAGASVLPDAVIEIK 55 >gi|291542895|emb|CBL16005.1| hemolysin TlyA family protein [Ruminococcus bromii L2-63] Length = 268 Score = 35.3 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 ++ RLD +VY F + A+ + V V+ + + E IEV+ +++ Sbjct: 1 MKKRLDILVYEKGFTDSREKAKAIIMSGQVYVDNQKADKCGTSYDENVKIEVRGNTQK 58 >gi|313905341|ref|ZP_07838707.1| hemolysin A [Eubacterium cellulosolvens 6] gi|313469811|gb|EFR65147.1| hemolysin A [Eubacterium cellulosolvens 6] Length = 298 Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150 + RLD +V P+ A+ + V V+G+ + E I +KQ K+L Sbjct: 1 MAKKRLDVLVTERGLAPSREKAKLIIMAGEVFVDGQREDKAGMTFPETAEITLKQSKKEL 60 Query: 151 ASVL 154 + Sbjct: 61 FPFV 64 >gi|217967433|ref|YP_002352939.1| hemolysin A [Dictyoglomus turgidum DSM 6724] gi|217336532|gb|ACK42325.1| hemolysin A [Dictyoglomus turgidum DSM 6724] Length = 271 Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK----SKQL 150 RLD ++ + F + AR V V VNG V + +IE+K+ SK Sbjct: 6 RLDVLLVKRGFFESREKARAAVIAGIVKVNGNVVIKPDLKIPIDSLIEIKENIPYVSKGG 65 Query: 151 ASVLEASQLAERDVPEYISVNHDNMVATFV 180 + +A E DV I+V+ F Sbjct: 66 FKLKKAIDTFEVDVKGKIAVDIGASTGGFT 95 >gi|15642728|ref|NP_232361.1| hypothetical protein VC2735 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586607|ref|ZP_01676392.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121726734|ref|ZP_01679959.1| conserved hypothetical protein [Vibrio cholerae V52] gi|153802922|ref|ZP_01957508.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153817443|ref|ZP_01970110.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821284|ref|ZP_01973951.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227082849|ref|YP_002811400.1| Heat shock protein 15 [Vibrio cholerae M66-2] gi|229507217|ref|ZP_04396722.1| ribosome-associated heat shock protein [Vibrio cholerae BX 330286] gi|229509862|ref|ZP_04399343.1| ribosome-associated heat shock protein [Vibrio cholerae B33] gi|229516983|ref|ZP_04406429.1| ribosome-associated heat shock protein [Vibrio cholerae RC9] gi|229606723|ref|YP_002877371.1| ribosome-associated heat shock protein [Vibrio cholerae MJ-1236] gi|254285930|ref|ZP_04960892.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254851272|ref|ZP_05240622.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|298500450|ref|ZP_07010254.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657333|gb|AAF95874.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549166|gb|EAX59199.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630895|gb|EAX63277.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124121535|gb|EAY40278.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|126512029|gb|EAZ74623.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126521216|gb|EAZ78439.1| conserved hypothetical protein [Vibrio cholerae B33] gi|150424112|gb|EDN16051.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227010737|gb|ACP06949.1| Heat shock protein 15 [Vibrio cholerae M66-2] gi|229346046|gb|EEO11018.1| ribosome-associated heat shock protein [Vibrio cholerae RC9] gi|229353336|gb|EEO18275.1| ribosome-associated heat shock protein [Vibrio cholerae B33] gi|229354722|gb|EEO19643.1| ribosome-associated heat shock protein [Vibrio cholerae BX 330286] gi|229369378|gb|ACQ59801.1| ribosome-associated heat shock protein [Vibrio cholerae MJ-1236] gi|254846977|gb|EET25391.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|297540619|gb|EFH76676.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 127 Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 9 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 67 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 68 IIEKISDQRRGAPE 81 >gi|254854035|ref|ZP_05243383.1| S4 domain-containing protein [Listeria monocytogenes FSL R2-503] gi|300765463|ref|ZP_07075444.1| hypothetical protein LMHG_12332 [Listeria monocytogenes FSL N1-017] gi|258607427|gb|EEW20035.1| S4 domain-containing protein [Listeria monocytogenes FSL R2-503] gi|300513774|gb|EFK40840.1| hypothetical protein LMHG_12332 [Listeria monocytogenes FSL N1-017] Length = 258 Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + ++ RLD I+ A Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|217963827|ref|YP_002349505.1| S4 domain protein [Listeria monocytogenes HCC23] gi|217333097|gb|ACK38891.1| S4 domain protein [Listeria monocytogenes HCC23] gi|307571602|emb|CAR84781.1| RNA-binding S4 domain protein [Listeria monocytogenes L99] Length = 259 Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + ++ RLD I+ A Sbjct: 141 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 193 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 194 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 236 >gi|46908264|ref|YP_014653.1| S4 domain-containing protein [Listeria monocytogenes str. 4b F2365] gi|47094010|ref|ZP_00231742.1| S4 domain protein [Listeria monocytogenes str. 4b H7858] gi|224498521|ref|ZP_03666870.1| S4 domain protein [Listeria monocytogenes Finland 1988] gi|254826216|ref|ZP_05231217.1| S4 domain-containing protein [Listeria monocytogenes FSL J1-194] gi|254933456|ref|ZP_05266815.1| S4 domain-containing protein [Listeria monocytogenes HPB2262] gi|254992791|ref|ZP_05274981.1| S4 domain protein [Listeria monocytogenes FSL J2-064] gi|255522100|ref|ZP_05389337.1| S4 domain protein [Listeria monocytogenes FSL J1-175] gi|46881535|gb|AAT04830.1| S4 domain protein [Listeria monocytogenes serotype 4b str. F2365] gi|47017615|gb|EAL08416.1| S4 domain protein [Listeria monocytogenes str. 4b H7858] gi|293585017|gb|EFF97049.1| S4 domain-containing protein [Listeria monocytogenes HPB2262] gi|293595457|gb|EFG03218.1| S4 domain-containing protein [Listeria monocytogenes FSL J1-194] gi|328466091|gb|EGF37261.1| S4 domain protein [Listeria monocytogenes 1816] gi|328472677|gb|EGF43535.1| S4 domain protein [Listeria monocytogenes 220] Length = 258 Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + ++ RLD I+ A Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|254385883|ref|ZP_05001202.1| rRNA methylase [Streptomyces sp. Mg1] gi|194344747|gb|EDX25713.1| rRNA methylase [Streptomyces sp. Mg1] Length = 271 Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 17/49 (34%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141 RLD + R + A Q + V V G + + + + + Sbjct: 6 RRRLDAELVRRSMARSREHAAQLIAAGRVTVGGATATKPATQVETSAAL 54 >gi|317009006|gb|ADU79586.1| hemolysin [Helicobacter pylori India7] Length = 235 Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ V + A+ V VLVN V+ S+ KE D I +L + Sbjct: 1 MRLDYALFSQHLVSSREKAKALVLKNQVLVNKMVVSKPSFIIKEDDKI-------ELIAT 53 Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180 A + ++ + + V Sbjct: 54 NLFISRAGEKLGAFLETHFVDFKGKVV 80 >gi|291221253|ref|XP_002730636.1| PREDICTED: hypothetical protein, partial [Saccoglossus kowalevskii] Length = 507 Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113 K K + +G +++FR + + + + LE+ LD ++ FV F R Sbjct: 372 EKIKQRALFGLFDKQQFRRLMSDNGKGKVYIG----VSLETCLDKCYFQKTFVCKSFDYR 427 Query: 114 QFVNHRHVL 122 Q V+ + Sbjct: 428 QDVHECTIY 436 >gi|114509307|gb|ABI75190.1| ribsomal subunit S9 [Oncorhynchus tshawytscha] Length = 100 Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 E D+ ++ +I AR + RH+ V + VNI S+ + + + Sbjct: 24 EEAPDSRFFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRS 80 >gi|121534494|ref|ZP_01666317.1| hemolysin A [Thermosinus carboxydivorans Nor1] gi|121306987|gb|EAX47906.1| hemolysin A [Thermosinus carboxydivorans Nor1] Length = 268 Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 19/46 (41%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136 + RLD ++ + + A+ ++ V V+G+ V+ Sbjct: 1 MPKERLDVLLVKRGLASSRERAKAWIMAGLVRVDGQRVDKAGAMVP 46 >gi|297581575|ref|ZP_06943498.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534413|gb|EFH73251.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 127 Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 9 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 67 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 68 IIEKISDQRRGAPE 81 >gi|255744307|ref|ZP_05418259.1| ribosome-associated heat shock protein [Vibrio cholera CIRS 101] gi|262158583|ref|ZP_06029698.1| ribosome-associated heat shock protein [Vibrio cholerae INDRE 91/1] gi|255737832|gb|EET93225.1| ribosome-associated heat shock protein [Vibrio cholera CIRS 101] gi|262029744|gb|EEY48393.1| ribosome-associated heat shock protein [Vibrio cholerae INDRE 91/1] Length = 125 Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 7 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 65 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 66 IIEKISDQRRGAPE 79 >gi|118349794|ref|XP_001008178.1| hypothetical protein TTHERM_00010930 [Tetrahymena thermophila] gi|89289945|gb|EAR87933.1| hypothetical protein TTHERM_00010930 [Tetrahymena thermophila SB210] Length = 1698 Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 1/76 (1%) Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS-VLEASQLAERDVPEYISVNHDNMVATF 179 + +N +N S ++ + K L + R +P +ISV+ Sbjct: 1513 IHINSNKINQISAFKRKKTNVWQKYIFTLLNIEFTKYPMSKNRRLPSWISVDLKYGKIIL 1572 Query: 180 VRIPSSLKDVPYPVIM 195 P + + Sbjct: 1573 TGEPQYFDSESIMIKI 1588 >gi|146319969|ref|YP_001199680.1| tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253751034|ref|YP_003024175.1| putative tyrosyl-tRNA synthetase [Streptococcus suis SC84] gi|253752935|ref|YP_003026075.1| tyrosyl-tRNA synthetase [Streptococcus suis P1/7] gi|253754759|ref|YP_003027899.1| tyrosyl-tRNA synthetase [Streptococcus suis BM407] gi|189029779|sp|A4VYU1|SYY_STRS2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS gi|145690775|gb|ABP91280.1| Tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251815323|emb|CAZ50892.1| putative tyrosyl-tRNA synthetase [Streptococcus suis SC84] gi|251817223|emb|CAZ54947.1| putative tyrosyl-tRNA synthetase [Streptococcus suis BM407] gi|251819180|emb|CAR44342.1| putative tyrosyl-tRNA synthetase [Streptococcus suis P1/7] gi|292557577|gb|ADE30578.1| Tyrosyl-tRNA synthetase [Streptococcus suis GZ1] gi|319757286|gb|ADV69228.1| tyrosyl-tRNA synthetase [Streptococcus suis JS14] Length = 418 Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 6/86 (6%) Query: 64 DISEKKF----RSIFKEADRSRGDTSHNLISFLESRLDTI--VYRAKFVPTIFAARQFVN 117 +I+E+ F +++ + + N E L+ + + + V + AR+ V Sbjct: 316 NITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLVTSGIVNSKRQAREDVQ 375 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + VNG V Y + D I+ Sbjct: 376 NGAIYVNGERVQDLDYTLSDSDKIDG 401 >gi|259501971|ref|ZP_05744873.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259170030|gb|EEW54525.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 416 Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 15/41 (36%) Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 P+ ARQ V++ + +NG V + K Sbjct: 359 GMEPSRRQARQDVSNGAIRINGEKVTDVDAEVDPSTHFDGK 399 >gi|219847267|ref|YP_002461700.1| hemolysin A [Chloroflexus aggregans DSM 9485] gi|219541526|gb|ACL23264.1| hemolysin A [Chloroflexus aggregans DSM 9485] Length = 264 Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 RLDT++ T A+ + VLVNG+ + IEV+ Sbjct: 1 MTRQRLDTLLVERGLAETRAKAQALIMAGQVLVNGQVQTKAGTQVAADAQIEVRS 55 >gi|2896136|gb|AAC03115.1| ribosomal protein S4 [Pseudomonas aeruginosa] Length = 18 Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 10/14 (71%) Query: 193 VIMQPNLVVEFYSR 206 V + NL+VE YS+ Sbjct: 5 VPINENLIVELYSK 18 >gi|239931905|ref|ZP_04688858.1| hypothetical protein SghaA1_27034 [Streptomyces ghanaensis ATCC 14672] gi|291440275|ref|ZP_06579665.1| RNA-binding S4 domain-containing protein [Streptomyces ghanaensis ATCC 14672] gi|291343170|gb|EFE70126.1| RNA-binding S4 domain-containing protein [Streptomyces ghanaensis ATCC 14672] Length = 132 Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 R+D+ ++ + V T HV VNG V ++ + GD + ++ + ++ V+ Sbjct: 55 RIDSWIWSVRLVKTRSLGATACRGGHVRVNGERV-KPAHSVRVGDEVRLRHEGRERVVVV 113 Query: 155 EASQLAERDVP 165 + P Sbjct: 114 KRLIRKRVGAP 124 >gi|16801200|ref|NP_471468.1| hypothetical protein lin2134 [Listeria innocua Clip11262] gi|16414648|emb|CAC97364.1| lin2134 [Listeria innocua Clip11262] Length = 258 Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + ++ RLD I+ A Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|114679024|ref|XP_001174942.1| PREDICTED: similar to Ribosomal protein S9 isoform 3 [Pan troglodytes] Length = 203 Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 25/151 (16%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV------ 121 + + FLE RL T V++ +I AR + RH+ Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHISPLHLV 141 Query: 122 ---LVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149 V + VNI S+ + + + Sbjct: 142 TSSRVRKQVVNIPSFIVRLDSQKHIDFSLRS 172 >gi|108562786|ref|YP_627102.1| hemolysin [Helicobacter pylori HPAG1] gi|107836559|gb|ABF84428.1| hemolysin [Helicobacter pylori HPAG1] Length = 235 Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ V + A+ V VLVN V+ S+ KEGD IE+ Sbjct: 1 MRLDYALFNQHLVSSREKAKALVLKNQVLVNKMVVSKPSFIIKEGDQIEL 50 >gi|47097617|ref|ZP_00235141.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854] gi|254899274|ref|ZP_05259198.1| S4 domain protein [Listeria monocytogenes J0161] gi|254912587|ref|ZP_05262599.1| S4 domain-containing protein [Listeria monocytogenes J2818] gi|254936913|ref|ZP_05268610.1| S4 domain-containing protein [Listeria monocytogenes F6900] gi|47014004|gb|EAL05013.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854] gi|258609513|gb|EEW22121.1| S4 domain-containing protein [Listeria monocytogenes F6900] gi|293590578|gb|EFF98912.1| S4 domain-containing protein [Listeria monocytogenes J2818] Length = 258 Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + ++ RLD I+ A Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEIGLTVSSMRLDVIISNAH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|153212569|ref|ZP_01948316.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153825516|ref|ZP_01978183.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|229513663|ref|ZP_04403127.1| ribosome-associated heat shock protein [Vibrio cholerae TMA 21] gi|229524713|ref|ZP_04414118.1| ribosome-associated heat shock protein [Vibrio cholerae bv. albensis VL426] gi|229527339|ref|ZP_04416731.1| ribosome-associated heat shock protein [Vibrio cholerae 12129(1)] gi|254225452|ref|ZP_04919063.1| conserved hypothetical protein [Vibrio cholerae V51] gi|124116440|gb|EAY35260.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|125622086|gb|EAZ50409.1| conserved hypothetical protein [Vibrio cholerae V51] gi|149740801|gb|EDM54892.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|229334971|gb|EEO00456.1| ribosome-associated heat shock protein [Vibrio cholerae 12129(1)] gi|229338294|gb|EEO03311.1| ribosome-associated heat shock protein [Vibrio cholerae bv. albensis VL426] gi|229349540|gb|EEO14496.1| ribosome-associated heat shock protein [Vibrio cholerae TMA 21] Length = 127 Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 9 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 67 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 68 IIEKISDQRRGAPE 81 >gi|297243603|ref|ZP_06927534.1| rRNA methylase [Gardnerella vaginalis AMD] gi|296888354|gb|EFH27095.1| rRNA methylase [Gardnerella vaginalis AMD] Length = 267 Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 24/63 (38%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 + RLD + + + A++ + V V+ R++ S+ I + + + Sbjct: 15 ISQRLDCALVKRGLAESRTTAQRLIRAGVVSVDNRNITKSSFLVNNSHAITINESKNTQS 74 Query: 152 SVL 154 + Sbjct: 75 CIR 77 >gi|229545666|ref|ZP_04434391.1| pseudouridylate synthase [Enterococcus faecalis TX1322] gi|307275817|ref|ZP_07556956.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX2134] gi|307291840|ref|ZP_07571711.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX0411] gi|229309234|gb|EEN75221.1| pseudouridylate synthase [Enterococcus faecalis TX1322] gi|306497106|gb|EFM66652.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX0411] gi|306507509|gb|EFM76640.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX2134] gi|315029545|gb|EFT41477.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX4000] gi|315032018|gb|EFT43950.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX0017] gi|315144961|gb|EFT88977.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX2141] gi|315168880|gb|EFU12897.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX1341] Length = 310 Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 9/110 (8%) Query: 75 KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134 K+ +++ + + I + R+D ++ + +Q++ +HV VNG +V +Y+ Sbjct: 3 KQQRKAKMEQINVTIQTEKGRIDKVLSEHLPNHSRSQIQQWLKEKHVTVNGETV-RANYK 61 Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184 GD I V EA + D+P +++ +++ V P Sbjct: 62 VTAGDEIVVTIPEP------EALDMVAEDIP--LTIVYEDNDVIVVNKPQ 103 >gi|229541185|ref|ZP_04430245.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1] gi|229325605|gb|EEN91280.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1] Length = 258 Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%) Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 + R + H V VN ++V +++C+EGD + + +E E+ Sbjct: 195 SRQKTRALIEHGLVKVNWKTVEDPAFQCEEGDTFSARGYGRSRLIRVEGKTKKEK 249 >gi|29565624|ref|NP_817203.1| ribosomal protein S4 [Pinus koraiensis] gi|29469723|gb|AAO74051.1| ORF76a [Pinus koraiensis] Length = 76 Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 RL+ I++R PTI ARQ + +N ++ Sbjct: 1 MRLNNILFRLGMAPTIPGARQLTRLFFIQLNNCNI 35 >gi|147675399|ref|YP_001218223.1| hypothetical protein VC0395_A2308 [Vibrio cholerae O395] gi|146317282|gb|ABQ21821.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227014621|gb|ACP10831.1| Heat shock protein 15 [Vibrio cholerae O395] Length = 127 Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 9 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 67 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 68 IIEKISDQRRGAPE 81 >gi|192288921|ref|YP_001989526.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1] gi|192282670|gb|ACE99050.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1] Length = 89 Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ A+ V +A V HV +NG + K GDV+ + Sbjct: 3 RQRLDKWLWHARVVRARTSAAALVERGHVRINGVRETSPGHGIKVGDVLTI 53 >gi|241895685|ref|ZP_04782981.1| ribosomal protein S4e [Weissella paramesenteroides ATCC 33313] gi|241871052|gb|EER74803.1| ribosomal protein S4e [Weissella paramesenteroides ATCC 33313] Length = 261 Score = 34.9 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD+IV + + A+Q + H V VN +N Y D++ V++ + Sbjct: 185 RLDSIV-ANGYNISRNHAKQMIEHDLVRVNWTDINKPDYVLAVNDLVSVRKYGR 237 >gi|325278866|ref|YP_004251408.1| Sporulation domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324310675|gb|ADY31228.1| Sporulation domain-containing protein [Odoribacter splanchnicus DSM 20712] Length = 173 Score = 34.9 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVAT 178 H+ +N + YR + V + L + + +D+P Y+ + D Sbjct: 63 HIHLNEKKKTFTGYRIQIYSVSSFGCNIENLKEMRNKFEETFQDIPAYLKYFDPD-FKIR 121 Query: 179 FVRIPSSLKDVP 190 + L+ +P Sbjct: 122 VGNYRNRLECIP 133 >gi|302389863|ref|YP_003825684.1| hemolysin A [Thermosediminibacter oceani DSM 16646] gi|302200491|gb|ADL08061.1| hemolysin A [Thermosediminibacter oceani DSM 16646] Length = 264 Score = 34.9 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 + RLD ++ + + A+ + +V VN + ++ I VK++S Sbjct: 1 MQKERLDVLLVQRGLFSSRERAKSEIMMGNVFVNNKKIDKPGTMVDINSDIIVKERS 57 >gi|290892174|ref|ZP_06555170.1| S4 domain-containing protein [Listeria monocytogenes FSL J2-071] gi|290558297|gb|EFD91815.1| S4 domain-containing protein [Listeria monocytogenes FSL J2-071] Length = 258 Score = 34.9 bits (79), Expect = 6.3, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + A + ++ RLD I+ A Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLAN----AIYAPVVWEEIGLTVSSMRLDVIISNAH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|241206829|ref|YP_002977925.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860719|gb|ACS58386.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 134 Score = 34.9 bits (79), Expect = 6.3, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 R+D ++ A+ + A+ + HV +NG + S K GD IE+ + + + Sbjct: 12 RQRIDKWLFFARMAKSRSVAQSHIQSGHVRINGERCSQPSQMVKPGDRIELTLERRDVVL 71 Query: 153 VL 154 V+ Sbjct: 72 VV 73 >gi|224540975|ref|ZP_03681514.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM 15897] gi|224526126|gb|EEF95231.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM 15897] Length = 408 Score = 34.9 bits (79), Expect = 6.3, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 6/67 (8%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE-----GDVIEVKQKS 147 E L+ +V +A + ARQFV VLVNG V + + G V +++ Sbjct: 341 EQILNVLV-KAGAASSNREARQFVKGGSVLVNGEKVTDEKFVVSKDNAFGGKVTVIRRGK 399 Query: 148 KQLASVL 154 K+ + Sbjct: 400 KKYFVIN 406 >gi|116873458|ref|YP_850239.1| S4 domain-containing protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742336|emb|CAK21460.1| S4 domain protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 258 Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + ++ RLD I+ A Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLTNAVYAP----VVWEEVGLTVSSMRLDVIISNAH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|262170024|ref|ZP_06037713.1| ribosome-associated heat shock protein [Vibrio cholerae RC27] gi|262021432|gb|EEY40144.1| ribosome-associated heat shock protein [Vibrio cholerae RC27] Length = 125 Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 7 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 65 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 66 IIEKISDQRRGAPE 79 >gi|262190139|ref|ZP_06048424.1| ribosome-associated heat shock protein [Vibrio cholerae CT 5369-93] gi|262033980|gb|EEY52435.1| ribosome-associated heat shock protein [Vibrio cholerae CT 5369-93] Length = 125 Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 7 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 65 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 66 IIEKISDQRRGAPE 79 >gi|297538421|ref|YP_003674190.1| RNA-binding S4 domain-containing protein [Methylotenera sp. 301] gi|297257768|gb|ADI29613.1| RNA-binding S4 domain protein [Methylotenera sp. 301] Length = 138 Score = 34.9 bits (79), Expect = 6.5, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + RLD ++ A+F T A + V V+G V + G VI ++ + ++ Sbjct: 11 KCRLDKWLWSARFFKTRSLATAAIETGKVHVDGDRV-KPAKEVHIGQVIHIRNRDFEIEV 69 Query: 153 VLEASQLAERDVPE 166 + A R PE Sbjct: 70 NVLALSNIRRGSPE 83 >gi|124810096|ref|XP_001348758.1| mitochondrial ribosomal protein S4/S9 precursor, putative [Plasmodium falciparum 3D7] gi|23497657|gb|AAN37197.1| mitochondrial ribosomal protein S4/S9 precursor, putative [Plasmodium falciparum 3D7] Length = 159 Score = 34.9 bits (79), Expect = 6.5, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV--IEVKQKSKQ 149 RL +++R KFV TI A ++ H ++ + +N S+ I+ SK Sbjct: 81 CRRRLAVLLFRLKFVQTIKLAITYIQHGNIRIGNNVINNPSFHINRNMEDHIKWADGSKI 140 Query: 150 LASVLEASQLAE 161 L + + + + Sbjct: 141 LKHIQKHRESKD 152 >gi|253996393|ref|YP_003048457.1| RNA-binding S4 domain-containing protein [Methylotenera mobilis JLW8] gi|253983072|gb|ACT47930.1| RNA-binding S4 domain protein [Methylotenera mobilis JLW8] Length = 132 Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + RLD ++ A+F T A ++ V V+G V + G I ++ + ++ Sbjct: 8 KCRLDKWLWAARFFKTRSLATTAIDTGKVHVDGDRV-KPAKEVHIGQTIHIRNRDFEIEV 66 Query: 153 VLEASQLAERDVPE 166 ++A + PE Sbjct: 67 TVQALSNVRKGAPE 80 >gi|15645700|ref|NP_207877.1| hemolysin (tly) [Helicobacter pylori 26695] gi|2314234|gb|AAD08129.1| hemolysin (tly) [Helicobacter pylori 26695] Length = 235 Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ V + A+ V VLVN V+ S+ KE D IE+ + Sbjct: 1 MRLDYALFSQHLVNSREKAKALVLKNQVLVNKMVVSKPSFIVKENDKIELIAE------- 53 Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180 A + ++ + + V Sbjct: 54 KLFVSRAGEKLGAFLETHFVDFKGKVV 80 >gi|89093788|ref|ZP_01166734.1| heat shock protein 15-like [Oceanospirillum sp. MED92] gi|89081918|gb|EAR61144.1| heat shock protein 15-like [Oceanospirillum sp. MED92] Length = 139 Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 + RLD ++ A+F T A+Q + V NG+ S + G V+E++Q + Sbjct: 7 KVRLDKWLWAARFYKTRAIAKQMIEGGKVHYNGQR-TKCSRHVEVGAVLEIRQGFDEKEI 65 Query: 153 VLEASQLAERDVPE 166 V+ R PE Sbjct: 66 VVVMLSDQRRGAPE 79 >gi|315283065|ref|ZP_07871338.1| S4 domain-containing protein [Listeria marthii FSL S4-120] gi|313613292|gb|EFR87163.1| S4 domain-containing protein [Listeria marthii FSL S4-120] Length = 163 Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + + ++ RLD I+ A Sbjct: 45 KDYLTLQLEKVGKVNVM---LEETELANAVYAP----VIWEEMGLTVSSMRLDVIISNAH 97 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 98 HIS-RQKAKQLVVAGLVKVNWKTVENPDFECEEEDVLSARGYGR 140 >gi|298492287|ref|YP_003722464.1| beta-lactamase domain-containing protein ['Nostoc azollae' 0708] gi|298234205|gb|ADI65341.1| beta-lactamase domain protein ['Nostoc azollae' 0708] Length = 571 Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 156 ASQLAERDVP-EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203 AS++ + +P + + +++ A +P PV +Q NL+VE Sbjct: 104 ASEVTSKLLPLNWPEQDPEDIPAFCHALPLRS-----PVEIQENLIVEL 147 >gi|315633375|ref|ZP_07888666.1| Hsp15 family heat shock protein [Aggregatibacter segnis ATCC 33393] gi|315477875|gb|EFU68616.1| Hsp15 family heat shock protein [Aggregatibacter segnis ATCC 33393] Length = 138 Score = 34.9 bits (79), Expect = 7.1, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ A+F T A++ ++ V NG+ + + + G ++++Q S + V+ Sbjct: 15 RLDKWLWAARFYKTRTLAKEMIDGGKVHYNGQR-SKPNKIVEVGATLKIRQGSDEKEIVV 73 Query: 155 EASQLAERDVPE 166 A R PE Sbjct: 74 LALSTQRRGAPE 85 >gi|147921289|ref|YP_684897.1| putative ribosomal RNA methyltransferase [uncultured methanogenic archaeon RC-I] gi|110620293|emb|CAJ35571.1| putative ribosomal RNA methyltransferase [uncultured methanogenic archaeon RC-I] Length = 216 Score = 34.9 bits (79), Expect = 7.1, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD + + + A+++++ V +NG V S + K G +IE+ ++ + Sbjct: 1 MRLDEYLVSEGLIASRSRAKRYIHRGLVKLNGEVVTKPSKQVKPGAIIEIAEEDRPEGYF 60 Query: 154 L 154 Sbjct: 61 K 61 >gi|223933066|ref|ZP_03625059.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591] gi|330831970|ref|YP_004400795.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3] gi|223898253|gb|EEF64621.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591] gi|329306193|gb|AEB80609.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3] Length = 418 Score = 34.9 bits (79), Expect = 7.3, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 6/86 (6%) Query: 64 DISEKKF----RSIFKEADRSRGDTSHNLISFLESRLDTI--VYRAKFVPTIFAARQFVN 117 +I+E+ F +++ + + N E L+ + + + V + AR+ V Sbjct: 316 NITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLVTSGIVTSKRQAREDVQ 375 Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEV 143 + + VNG V Y + D I+ Sbjct: 376 NGAIYVNGERVQDLDYTLSDSDKIDG 401 >gi|115522156|ref|YP_779067.1| RNA-binding S4 domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516103|gb|ABJ04087.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris BisA53] Length = 89 Score = 34.9 bits (79), Expect = 7.6, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 RLD ++ A+ V +A V HV VNG + K GDV+ + + Sbjct: 3 RQRLDKWLWHARVVKARNSAVALVESGHVRVNGGRQTSPGHALKAGDVVTIALD--RSVR 60 Query: 153 VLEASQLAER 162 VL+ +ER Sbjct: 61 VLKVIGFSER 70 >gi|46198486|ref|YP_004153.1| hemolysin [Thermus thermophilus HB27] gi|46196108|gb|AAS80526.1| hemolysin [Thermus thermophilus HB27] Length = 235 Score = 34.5 bits (78), Expect = 8.0, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 RLD + V + A++ + V V G+ V ++ EG +E+ + + Sbjct: 1 MRLDRYLVERGLVESREKAKRLIQEGKVRVGGKVVQKPAHPVPEGAAVELLAEER 55 >gi|217076810|ref|YP_002334526.1| ribosomal large subunit pseudouridine synthase B [Thermosipho africanus TCF52B] gi|217036663|gb|ACJ75185.1| ribosomal large subunit pseudouridine synthase B [Thermosipho africanus TCF52B] Length = 247 Score = 34.5 bits (78), Expect = 8.2, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 +L + F A Q++ V VNG+ V+ + K+ D++ + K ++ Sbjct: 8 IKLQKYLQMCGFA--RRKADQYIIAGRVTVNGKVVDKPWFDVKDDDIVMLDNKKLKINQK 65 Query: 154 LE 155 E Sbjct: 66 FE 67 >gi|178925007|gb|ACB77911.1| ribosomal protein S9 [Dreissena polymorpha] Length = 51 Score = 34.5 bits (78), Expect = 8.3, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 79 RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + FLE RL T V++ +I AR + RH+ V + V Sbjct: 2 KLDFVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVV 51 >gi|255935707|ref|XP_002558880.1| Pc13g04450 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583500|emb|CAP91514.1| Pc13g04450 [Penicillium chrysogenum Wisconsin 54-1255] Length = 188 Score = 34.5 bits (78), Expect = 8.3, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%) Query: 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV--IEVKQKSK 148 RL + R+ V TI AA F+ HV V VN ++ + SK Sbjct: 111 LCRRRLAVFMVRSGMVETIKAATTFIEQGHVRVGTEVVNDPAFLVTRNMEDFVTWVDSSK 170 Query: 149 QLASVLEASQ 158 ++L + Sbjct: 171 IKRNILRYRE 180 >gi|327191765|gb|EGE58767.1| putative heat shock protein (ribosome-associated) [Rhizobium etli CNPAF512] Length = 134 Score = 34.5 bits (78), Expect = 8.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 R+D ++ + V + A+ V HV +NG + S K GD IE+ + + + Sbjct: 12 RQRIDKWLFFTRMVKSRSLAQSHVQSGHVRINGERCSQPSQMVKPGDRIELTLERRDIVL 71 Query: 153 VL 154 ++ Sbjct: 72 IV 73 >gi|190893875|ref|YP_001980417.1| putative heat shock protein (ribosome-associated) [Rhizobium etli CIAT 652] gi|218507914|ref|ZP_03505792.1| putative heat shock protein (ribosome-associated) [Rhizobium etli Brasil 5] gi|190699154|gb|ACE93239.1| putative heat shock protein (ribosome-associated) [Rhizobium etli CIAT 652] Length = 134 Score = 34.5 bits (78), Expect = 8.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 R+D ++ + V + A+ V HV +NG + S K GD IE+ + + + Sbjct: 12 RQRIDKWLFFTRMVKSRSLAQSHVQSGHVRINGERCSQPSQMVKPGDRIELTLERRDIVL 71 Query: 153 VL 154 ++ Sbjct: 72 IV 73 >gi|251793752|ref|YP_003008482.1| heat shock protein 15 [Aggregatibacter aphrophilus NJ8700] gi|247535149|gb|ACS98395.1| heat shock protein 15 (HSP15) [Aggregatibacter aphrophilus NJ8700] Length = 137 Score = 34.5 bits (78), Expect = 8.4, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ A+F T A++ ++ V NG+ + + G ++++Q +++ V+ Sbjct: 14 RLDKWLWAARFYKTRTLAKEMIDGGKVHYNGQR-TKPNKIVEVGATLKLRQGNEEKEVVI 72 Query: 155 EASQLAERDVPE 166 A R PE Sbjct: 73 LALSAQRRGAPE 84 >gi|229521809|ref|ZP_04411227.1| ribosome-associated heat shock protein [Vibrio cholerae TM 11079-80] gi|229341403|gb|EEO06407.1| ribosome-associated heat shock protein [Vibrio cholerae TM 11079-80] Length = 127 Score = 34.5 bits (78), Expect = 8.4, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152 E RLD ++ A+F T AR V V NG+ S + G I ++Q + Sbjct: 9 EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVELGAQITLRQGHDEKTV 67 Query: 153 VLEASQLAERDVPE 166 ++E R PE Sbjct: 68 IIEKISDQRRGAPE 81 >gi|226224634|ref|YP_002758741.1| hypothetical protein Lm4b_02049 [Listeria monocytogenes Clip81459] gi|225877096|emb|CAS05808.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 258 Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 8/104 (7%) Query: 45 PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104 Y LQL K+ + E + ++ RLD I+ Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNVH 192 Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 + A+Q V V VN ++V + C+E DV+ + + Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235 >gi|227529017|ref|ZP_03959066.1| ribosomal protein S4e [Lactobacillus vaginalis ATCC 49540] gi|227351029|gb|EEJ41320.1| ribosomal protein S4e [Lactobacillus vaginalis ATCC 49540] Length = 261 Score = 34.5 bits (78), Expect = 8.8, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 24/60 (40%) Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162 A F + A+Q + H V +N + Y +E D++ V+ + + + + Sbjct: 192 AGFNYSRNRAKQLLEHGLVQINWEEMQRPDYSVREHDMLSVRHAGRLRMDQVGSITRKNK 251 >gi|37678393|ref|NP_933002.1| ribosome-associated heat shock protein [Vibrio vulnificus YJ016] gi|320157719|ref|YP_004190098.1| ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4-like protein) [Vibrio vulnificus MO6-24/O] gi|37197132|dbj|BAC92973.1| ribosome-associated heat shock protein [Vibrio vulnificus YJ016] gi|319933031|gb|ADV87895.1| ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Vibrio vulnificus MO6-24/O] Length = 130 Score = 34.5 bits (78), Expect = 8.8, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ A+F T AR V+ V NG+ S + G V++++Q +++ V+ Sbjct: 11 RLDKWLWAARFYKTRSIARDMVDGGKVHYNGQRA-KPSKIVEVGAVLKLRQGNEEKTVVI 69 Query: 155 EASQLAERDVPE 166 E R PE Sbjct: 70 EKLSTQRRGAPE 81 >gi|119592620|gb|EAW72214.1| ribosomal protein S9, isoform CRA_e [Homo sapiens] Length = 156 Score = 34.5 bits (78), Expect = 9.2, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 16/115 (13%) Query: 24 KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78 KS ++ G +G R K + L +K + + EK R +F+ Sbjct: 22 KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81 Query: 79 -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122 + + FLE RL T V++ +I AR + RH+ Sbjct: 82 VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136 >gi|27364327|ref|NP_759855.1| ribosome-associated heat shock protein [Vibrio vulnificus CMCP6] gi|27360445|gb|AAO09382.1| Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Vibrio vulnificus CMCP6] Length = 128 Score = 34.5 bits (78), Expect = 9.3, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154 RLD ++ A+F T AR V+ V NG+ S + G V++++Q +++ V+ Sbjct: 9 RLDKWLWAARFYKTRSIARDMVDGGKVHYNGQRA-KPSKIVEVGAVLKLRQGNEEKTVVI 67 Query: 155 EASQLAERDVPE 166 E R PE Sbjct: 68 EKLSTQRRGAPE 79 >gi|157151563|ref|YP_001449982.1| S4 domain-containing protein [Streptococcus gordonii str. Challis substr. CH1] gi|157076357|gb|ABV11040.1| S4 domain [Streptococcus gordonii str. Challis substr. CH1] Length = 275 Score = 34.5 bits (78), Expect = 9.3, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 2/83 (2%) Query: 74 FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133 F+ R + I RLD ++ + F + A Q + +HV VN ++ SY Sbjct: 177 FERLLRVQEAQVSKEILASSMRLDKLI-ASSFKLSRNDASQLIFGKHVKVNYSIIDNPSY 235 Query: 134 RCKEGDVIEVKQKSKQLASVLEA 156 + D+I V++ + V E Sbjct: 236 LVELNDLISVRRFGR-FKIVKEN 257 >gi|188527169|ref|YP_001909856.1| hemolysin [Helicobacter pylori Shi470] gi|188143409|gb|ACD47826.1| hemolysin [Helicobacter pylori Shi470] Length = 235 Score = 34.5 bits (78), Expect = 9.6, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143 RLD ++ V + A+ V VLVN V+ S+ KEGD IE+ Sbjct: 1 MRLDYALFNQHLVNSREKAKALVLKNQVLVNKMVVSKPSFIVKEGDKIEL 50 >gi|125631518|gb|ABN47222.1| ribosomal protein S9 [Oxydesmus granulosus] Length = 103 Score = 34.5 bits (78), Expect = 9.6, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%) Query: 77 ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128 + + FLE RL T V++ +I AR + +H+ V + V Sbjct: 52 RMKLDYVLGLRVEVFLERRLQTQVFKLGLAKSIHHARVLIRQKHISVRKQVV 103 >gi|312882860|ref|ZP_07742592.1| hypothetical protein VIBC2010_19815 [Vibrio caribbenthicus ATCC BAA-2122] gi|309369379|gb|EFP96899.1| hypothetical protein VIBC2010_19815 [Vibrio caribbenthicus ATCC BAA-2122] Length = 128 Score = 34.5 bits (78), Expect = 9.8, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Query: 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153 RLD ++ A+F T AR ++ V NG+ S + G I ++Q ++ + Sbjct: 8 IRLDKWLWAARFYKTRSIARNMIDGGKVHYNGQR-TKPSKTVETGATITLRQGHEEKTII 66 Query: 154 LEASQLAERDVPE 166 +E R PE Sbjct: 67 IERISGQRRGAPE 79 >gi|15967012|ref|NP_387365.1| HEAT shock-like protein [Sinorhizobium meliloti 1021] gi|307302480|ref|ZP_07582237.1| RNA-binding S4 domain protein [Sinorhizobium meliloti BL225C] gi|307316190|ref|ZP_07595634.1| RNA-binding S4 domain protein [Sinorhizobium meliloti AK83] gi|15076285|emb|CAC47838.1| Heat shock protein 15 (HSP15) [Sinorhizobium meliloti 1021] gi|306898030|gb|EFN28772.1| RNA-binding S4 domain protein [Sinorhizobium meliloti AK83] gi|306903150|gb|EFN33740.1| RNA-binding S4 domain protein [Sinorhizobium meliloti BL225C] Length = 143 Score = 34.5 bits (78), Expect = 9.9, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151 + RLD ++ A+ + + A++ + HV VNG+ S + K GD++EV + + L Sbjct: 11 MRQRLDKWLFFARLIKSRSLAQKAIEAGHVAVNGKRETQSSAQIKAGDMLEVSLERRDLV 70 Query: 152 S 152 Sbjct: 71 V 71 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.316 0.147 0.477 Lambda K H 0.267 0.0451 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,983,887,153 Number of Sequences: 13984884 Number of extensions: 72525123 Number of successful extensions: 246267 Number of sequences better than 10.0: 7615 Number of HSP's better than 10.0 without gapping: 7392 Number of HSP's successfully gapped in prelim test: 223 Number of HSP's that attempted gapping in prelim test: 215803 Number of HSP's gapped (non-prelim): 7758 length of query: 206 length of database: 4,792,584,752 effective HSP length: 132 effective length of query: 74 effective length of database: 2,946,580,064 effective search space: 218046924736 effective search space used: 218046924736 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 78 (34.5 bits)