BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780187|ref|YP_003064600.1| 30S ribosomal protein S4
[Candidatus Liberibacter asiaticus str. psy62]
         (206 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done



>gi|239831713|ref|ZP_04680042.1| ribosomal protein S4 [Ochrobactrum intermedium LMG 3301]
 gi|239823980|gb|EEQ95548.1| ribosomal protein S4 [Ochrobactrum intermedium LMG 3301]
          Length = 263

 Score =  242 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 150/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 59  MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 118

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 119 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 178

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQL  VLEA QLAERDVP+YI V+H+ +VAT+ 
Sbjct: 179 VNVNGRRVNIQSYRLKAGDVVEVREKSKQLVIVLEAVQLAERDVPDYIEVDHNKLVATYS 238

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPY V M+PNLVVEFYSR
Sbjct: 239 RVPT-LTDVPYAVQMEPNLVVEFYSR 263


>gi|260432821|ref|ZP_05786792.1| ribosomal protein S4 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416649|gb|EEX09908.1| ribosomal protein S4 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 206

 Score =  241 bits (615), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 150/206 (72%), Positives = 173/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ KSKQLA VLEA  LAERDVP+Y+ V+H  M ATFV
Sbjct: 121 VKVNGKRVNIPSYRVKEGDVIEVRDKSKQLAVVLEAVALAERDVPDYLDVDHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R PS L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPS-LGDVPYPVMMEPNLVVEFYAK 205


>gi|158423848|ref|YP_001525140.1| 30S ribosomal protein S4 [Azorhizobium caulinodans ORS 571]
 gi|189045363|sp|A8I889|RS4_AZOC5 RecName: Full=30S ribosomal protein S4
 gi|158330737|dbj|BAF88222.1| ribosomal protein S4 [Azorhizobium caulinodans ORS 571]
          Length = 205

 Score =  241 bits (615), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 145/206 (70%), Positives = 167/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+KHKIDRR+GEN+WGR KSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRISAKHKIDRRMGENIWGRSKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG I EK+F +++ EA R +GDT  NLI  LE RLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGSIGEKQFHAVYVEASRLKGDTGANLIGLLERRLDAVVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SY+ K GDVIEV++ SKQ+A VLEA QLAERDVP+Y+ V+H+ + A F 
Sbjct: 121 VKVNGRRVNIPSYQVKVGDVIEVREASKQMALVLEAVQLAERDVPDYLEVDHNRLTAKFN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L +VPYPV M+PNLVVEFYSR
Sbjct: 181 RIPE-LNEVPYPVQMEPNLVVEFYSR 205


>gi|126725806|ref|ZP_01741648.1| 30S ribosomal protein S4 [Rhodobacterales bacterium HTCC2150]
 gi|126705010|gb|EBA04101.1| 30S ribosomal protein S4 [Rhodobacterales bacterium HTCC2150]
          Length = 206

 Score =  240 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 148/206 (71%), Positives = 173/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFSEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR K+GDVIEV+ +SKQ A+V+EASQLAERDVP+Y+ V+H  MVATF 
Sbjct: 121 VKVNGKKVNIPSYRVKDGDVIEVRDRSKQNATVIEASQLAERDVPDYVDVDHSKMVATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R PS   DVPYPVIM+PNLVVEFY++
Sbjct: 181 RTPS-FSDVPYPVIMEPNLVVEFYAK 205


>gi|254780187|ref|YP_003064600.1| 30S ribosomal protein S4 [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039864|gb|ACT56660.1| 30S ribosomal protein S4 [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 206

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 206/206 (100%), Positives = 206/206 (100%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK
Sbjct: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH
Sbjct: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV
Sbjct: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIPSSLKDVPYPVIMQPNLVVEFYSR
Sbjct: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206


>gi|99081947|ref|YP_614101.1| 30S ribosomal protein S4 [Ruegeria sp. TM1040]
 gi|122984198|sp|Q1GES7|RS4_SILST RecName: Full=30S ribosomal protein S4
 gi|99038227|gb|ABF64839.1| SSU ribosomal protein S4P [Ruegeria sp. TM1040]
          Length = 206

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 148/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KSKQ  +VLEA QLAERDVP+YI V+H  + ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQNVAVLEAVQLAERDVPDYIEVDHSKLTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RAPG-LADVPYPVVMEPNLVVEFYAK 205


>gi|254466555|ref|ZP_05079966.1| ribosomal protein S4 [Rhodobacterales bacterium Y4I]
 gi|206687463|gb|EDZ47945.1| ribosomal protein S4 [Rhodobacterales bacterium Y4I]
          Length = 206

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 149/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV+ KSKQ+ +VLEA QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVRDKSKQMVAVLEAVQLAERDVPDYIEADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+ L DVPYPVIM+PNLVVEFY++
Sbjct: 181 RTPA-LGDVPYPVIMEPNLVVEFYAK 205


>gi|294678498|ref|YP_003579113.1| 30S ribosomal protein S4 [Rhodobacter capsulatus SB 1003]
 gi|294477318|gb|ADE86706.1| 30S ribosomal protein S4 [Rhodobacter capsulatus SB 1003]
          Length = 206

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 144/206 (69%), Positives = 168/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++K+KIDRR+GEN+WGR KSP+N R YGPG HGQRRK+K S FG QLRAKQK+K 
Sbjct: 1   MTKRTAAKYKIDRRMGENIWGRAKSPLNKRDYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD IVYRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGDLTEKQFRKIYGEAERVKGDTGENLIGLLERRLDAIVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNI SYR KEGDVI V+ +SKQLA VLEA+Q  ERDVP+Y+ V+H  M ATFV
Sbjct: 121 VTVNGARVNIASYRVKEGDVIAVRDRSKQLAIVLEAAQSGERDVPDYLEVDHGKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVEFY++
Sbjct: 181 RTPG-LSDVPYPVHMEPNLVVEFYAK 205


>gi|259416699|ref|ZP_05740619.1| ribosomal protein S4 [Silicibacter sp. TrichCH4B]
 gi|259348138|gb|EEW59915.1| ribosomal protein S4 [Silicibacter sp. TrichCH4B]
          Length = 206

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 148/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KSKQ  +VLEA QLAERDVP+YI V+H  + ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQNVAVLEAVQLAERDVPDYIEVDHSKLTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RAPG-LADVPYPVMMEPNLVVEFYAK 205


>gi|56698013|ref|YP_168384.1| 30S ribosomal protein S4 [Ruegeria pomeroyi DSS-3]
 gi|62287189|sp|Q5LNM2|RS4_SILPO RecName: Full=30S ribosomal protein S4
 gi|56679750|gb|AAV96416.1| ribosomal protein S4 [Ruegeria pomeroyi DSS-3]
          Length = 206

 Score =  239 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 148/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV+++SKQLASVLEA  LAERDVP+Y+ V+H  M ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVRERSKQLASVLEAVSLAERDVPDYLEVDHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPY V+M+PNLVVE+Y++
Sbjct: 181 RTPH-LGDVPYAVVMEPNLVVEYYAK 205


>gi|77462835|ref|YP_352339.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides 2.4.1]
 gi|126461727|ref|YP_001042841.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides ATCC 17029]
 gi|221638705|ref|YP_002524967.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides KD131]
 gi|90101713|sp|Q3J446|RS4_RHOS4 RecName: Full=30S ribosomal protein S4
 gi|152112256|sp|A3PIA3|RS4_RHOS1 RecName: Full=30S ribosomal protein S4
 gi|254764608|sp|B9KPH3|RS4_RHOSK RecName: Full=30S ribosomal protein S4
 gi|77387253|gb|ABA78438.1| SSU ribosomal protein S4P [Rhodobacter sphaeroides 2.4.1]
 gi|126103391|gb|ABN76069.1| SSU ribosomal protein S4P [Rhodobacter sphaeroides ATCC 17029]
 gi|221159486|gb|ACM00466.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides KD131]
          Length = 206

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 150/206 (72%), Positives = 175/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FG QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT   L+  LE RLD IVYRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGDLTEKQFRKIFAEAERVKGDTGEMLVGLLERRLDAIVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNIGSYRCKEGDVI+V++KS+QLA VLEA+QLAERDVP+YI V++  M ATFV
Sbjct: 121 VTVNGQRVNIGSYRCKEGDVIQVREKSRQLALVLEATQLAERDVPDYIEVDYSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVEFY++
Sbjct: 181 RTPG-LGDVPYPVQMEPNLVVEFYAK 205


>gi|254718936|ref|ZP_05180747.1| 30S ribosomal protein S4 [Brucella sp. 83/13]
 gi|265983924|ref|ZP_06096659.1| SSU ribosomal protein S4P [Brucella sp. 83/13]
 gi|306838833|ref|ZP_07471664.1| ribosomal protein S4 [Brucella sp. NF 2653]
 gi|264662516|gb|EEZ32777.1| SSU ribosomal protein S4P [Brucella sp. 83/13]
 gi|306406117|gb|EFM62365.1| ribosomal protein S4 [Brucella sp. NF 2653]
          Length = 205

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIEVDHNKMVATYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V M+PNLVVEFYSR
Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205


>gi|62289777|ref|YP_221570.1| 30S ribosomal protein S4 [Brucella abortus bv. 1 str. 9-941]
 gi|82699705|ref|YP_414279.1| 30S ribosomal protein S4 [Brucella melitensis biovar Abortus 2308]
 gi|189024020|ref|YP_001934788.1| Ribosomal protein S4 [Brucella abortus S19]
 gi|237815263|ref|ZP_04594261.1| ribosomal protein S4 [Brucella abortus str. 2308 A]
 gi|254689084|ref|ZP_05152338.1| 30S ribosomal protein S4 [Brucella abortus bv. 6 str. 870]
 gi|254697217|ref|ZP_05159045.1| 30S ribosomal protein S4 [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730116|ref|ZP_05188694.1| 30S ribosomal protein S4 [Brucella abortus bv. 4 str. 292]
 gi|256257333|ref|ZP_05462869.1| 30S ribosomal protein S4 [Brucella abortus bv. 9 str. C68]
 gi|260545474|ref|ZP_05821215.1| ribosomal protein S4 [Brucella abortus NCTC 8038]
 gi|260754581|ref|ZP_05866929.1| SSU ribosomal protein S4P [Brucella abortus bv. 6 str. 870]
 gi|260757804|ref|ZP_05870152.1| SSU ribosomal protein S4P [Brucella abortus bv. 4 str. 292]
 gi|260761627|ref|ZP_05873970.1| SSU ribosomal protein S4P [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883608|ref|ZP_05895222.1| 30S ribosomal protein S4 [Brucella abortus bv. 9 str. C68]
 gi|297248181|ref|ZP_06931899.1| 30S ribosomal protein S4 [Brucella abortus bv. 5 str. B3196]
 gi|75505300|sp|Q57DS5|RS4_BRUAB RecName: Full=30S ribosomal protein S4
 gi|90101677|sp|Q2YNH2|RS4_BRUA2 RecName: Full=30S ribosomal protein S4
 gi|226697812|sp|B2S567|RS4_BRUA1 RecName: Full=30S ribosomal protein S4
 gi|62195909|gb|AAX74209.1| RpsD, ribosomal protein S4 [Brucella abortus bv. 1 str. 9-941]
 gi|82615806|emb|CAJ10807.1| Ribosomal protein S4:RNA-binding S4:Ribosomal protein S4, bacterial
           and organelle form [Brucella melitensis biovar Abortus
           2308]
 gi|189019592|gb|ACD72314.1| Ribosomal protein S4 [Brucella abortus S19]
 gi|237790100|gb|EEP64310.1| ribosomal protein S4 [Brucella abortus str. 2308 A]
 gi|260096881|gb|EEW80756.1| ribosomal protein S4 [Brucella abortus NCTC 8038]
 gi|260668122|gb|EEX55062.1| SSU ribosomal protein S4P [Brucella abortus bv. 4 str. 292]
 gi|260672059|gb|EEX58880.1| SSU ribosomal protein S4P [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674689|gb|EEX61510.1| SSU ribosomal protein S4P [Brucella abortus bv. 6 str. 870]
 gi|260873136|gb|EEX80205.1| 30S ribosomal protein S4 [Brucella abortus bv. 9 str. C68]
 gi|297175350|gb|EFH34697.1| 30S ribosomal protein S4 [Brucella abortus bv. 5 str. B3196]
          Length = 205

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 153/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKHKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V M+PNLVVEFYSR
Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205


>gi|319784054|ref|YP_004143530.1| ribosomal protein S4 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169942|gb|ADV13480.1| ribosomal protein S4 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 205

 Score =  238 bits (607), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 153/206 (74%), Positives = 176/206 (85%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGD+SEK+FR +++EADR +GDTS NLI  LESRLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  HYGDVSEKQFRKVYEEADRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNIGSYRCK GDV+E+++KSKQL  VLEA  LAERDVP+YI  +H+ MVATF 
Sbjct: 121 VNVNGKRVNIGSYRCKPGDVVEIREKSKQLVIVLEAVGLAERDVPDYIEADHNKMVATFS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+ V M+PNLVVEFYSR
Sbjct: 181 RIPG-LADVPFAVQMEPNLVVEFYSR 205


>gi|255261708|ref|ZP_05341050.1| ribosomal protein S4 [Thalassiobium sp. R2A62]
 gi|255104043|gb|EET46717.1| ribosomal protein S4 [Thalassiobium sp. R2A62]
          Length = 206

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 148/206 (71%), Positives = 171/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRTSAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQLA VLEA QLAERDVP+Y+  +H  M ATFV
Sbjct: 121 VKVNGKKVNIPSYRVKEGDVIEVRDRSKQLAVVLEAVQLAERDVPDYVDADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPG-LGDVPYPVMMEPNLVVEFYAK 205


>gi|89070850|ref|ZP_01158095.1| 30S ribosomal protein S4 [Oceanicola granulosus HTCC2516]
 gi|89043588|gb|EAR49797.1| 30S ribosomal protein S4 [Oceanicola granulosus HTCC2516]
          Length = 206

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 144/204 (70%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT  NLI  LE RLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFSEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDV+ V++KS+Q+AS+LEA+QL ERDVP+Y+ V+H  + AT+V
Sbjct: 121 VTVNGKRVNIPSYRVKEGDVVAVREKSRQMASILEATQLPERDVPDYLDVDHSKLTATYV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPVIM+PNLV+E+Y
Sbjct: 181 RAPG-LADVPYPVIMEPNLVIEYY 203


>gi|17987416|ref|NP_540050.1| 30S ribosomal protein S4 [Brucella melitensis bv. 1 str. 16M]
 gi|148560413|ref|YP_001258806.1| 30S ribosomal protein S4 [Brucella ovis ATCC 25840]
 gi|161618794|ref|YP_001592681.1| 30S ribosomal protein S4 [Brucella canis ATCC 23365]
 gi|163843102|ref|YP_001627506.1| 30S ribosomal protein S4 [Brucella suis ATCC 23445]
 gi|225627323|ref|ZP_03785360.1| ribosomal protein S4 [Brucella ceti str. Cudo]
 gi|225852343|ref|YP_002732576.1| 30S ribosomal protein S4 [Brucella melitensis ATCC 23457]
 gi|254693567|ref|ZP_05155395.1| 30S ribosomal protein S4 [Brucella abortus bv. 3 str. Tulya]
 gi|254701596|ref|ZP_05163424.1| 30S ribosomal protein S4 [Brucella suis bv. 5 str. 513]
 gi|254704143|ref|ZP_05165971.1| 30S ribosomal protein S4 [Brucella suis bv. 3 str. 686]
 gi|254708561|ref|ZP_05170389.1| 30S ribosomal protein S4 [Brucella pinnipedialis M163/99/10]
 gi|254709936|ref|ZP_05171747.1| 30S ribosomal protein S4 [Brucella pinnipedialis B2/94]
 gi|254713936|ref|ZP_05175747.1| 30S ribosomal protein S4 [Brucella ceti M644/93/1]
 gi|254717006|ref|ZP_05178817.1| 30S ribosomal protein S4 [Brucella ceti M13/05/1]
 gi|256031429|ref|ZP_05445043.1| 30S ribosomal protein S4 [Brucella pinnipedialis M292/94/1]
 gi|256159551|ref|ZP_05457318.1| 30S ribosomal protein S4 [Brucella ceti M490/95/1]
 gi|256254837|ref|ZP_05460373.1| 30S ribosomal protein S4 [Brucella ceti B1/94]
 gi|256264157|ref|ZP_05466689.1| 30S ribosomal protein S4 [Brucella melitensis bv. 2 str. 63/9]
 gi|260168563|ref|ZP_05755374.1| 30S ribosomal protein S4 [Brucella sp. F5/99]
 gi|260563860|ref|ZP_05834346.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. 16M]
 gi|260566609|ref|ZP_05837079.1| SSU ribosomal protein S4P [Brucella suis bv. 4 str. 40]
 gi|261213831|ref|ZP_05928112.1| SSU ribosomal protein S4P [Brucella abortus bv. 3 str. Tulya]
 gi|261218812|ref|ZP_05933093.1| SSU ribosomal protein S4P [Brucella ceti M13/05/1]
 gi|261222017|ref|ZP_05936298.1| SSU ribosomal protein S4P [Brucella ceti B1/94]
 gi|261316061|ref|ZP_05955258.1| SSU ribosomal protein S4P [Brucella pinnipedialis M163/99/10]
 gi|261317482|ref|ZP_05956679.1| SSU ribosomal protein S4P [Brucella pinnipedialis B2/94]
 gi|261321689|ref|ZP_05960886.1| SSU ribosomal protein S4P [Brucella ceti M644/93/1]
 gi|261752148|ref|ZP_05995857.1| SSU ribosomal protein S4P [Brucella suis bv. 5 str. 513]
 gi|261754809|ref|ZP_05998518.1| SSU ribosomal protein S4P [Brucella suis bv. 3 str. 686]
 gi|261758035|ref|ZP_06001744.1| SSU ribosomal protein S4P [Brucella sp. F5/99]
 gi|265988517|ref|ZP_06101074.1| SSU ribosomal protein S4P [Brucella pinnipedialis M292/94/1]
 gi|265997981|ref|ZP_06110538.1| SSU ribosomal protein S4P [Brucella ceti M490/95/1]
 gi|306841935|ref|ZP_07474613.1| ribosomal protein S4 [Brucella sp. BO2]
 gi|306843765|ref|ZP_07476364.1| ribosomal protein S4 [Brucella sp. BO1]
 gi|26399431|sp|Q8YGM5|RS4_BRUME RecName: Full=30S ribosomal protein S4
 gi|172048262|sp|A5VQ09|RS4_BRUO2 RecName: Full=30S ribosomal protein S4
 gi|189045365|sp|A9MAK7|RS4_BRUC2 RecName: Full=30S ribosomal protein S4
 gi|189045366|sp|B0CLF6|RS4_BRUSI RecName: Full=30S ribosomal protein S4
 gi|254764573|sp|C0RIG4|RS4_BRUMB RecName: Full=30S ribosomal protein S4
 gi|17983107|gb|AAL52314.1| ssu ribosomal protein s4p [Brucella melitensis bv. 1 str. 16M]
 gi|148371670|gb|ABQ61649.1| ribosomal protein S4 [Brucella ovis ATCC 25840]
 gi|161335605|gb|ABX61910.1| ribosomal protein S4 [Brucella canis ATCC 23365]
 gi|163673825|gb|ABY37936.1| ribosomal protein S4 [Brucella suis ATCC 23445]
 gi|225617328|gb|EEH14373.1| ribosomal protein S4 [Brucella ceti str. Cudo]
 gi|225640708|gb|ACO00622.1| ribosomal protein S4 [Brucella melitensis ATCC 23457]
 gi|260153876|gb|EEW88968.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. 16M]
 gi|260156127|gb|EEW91207.1| SSU ribosomal protein S4P [Brucella suis bv. 4 str. 40]
 gi|260915438|gb|EEX82299.1| SSU ribosomal protein S4P [Brucella abortus bv. 3 str. Tulya]
 gi|260920601|gb|EEX87254.1| SSU ribosomal protein S4P [Brucella ceti B1/94]
 gi|260923901|gb|EEX90469.1| SSU ribosomal protein S4P [Brucella ceti M13/05/1]
 gi|261294379|gb|EEX97875.1| SSU ribosomal protein S4P [Brucella ceti M644/93/1]
 gi|261296705|gb|EEY00202.1| SSU ribosomal protein S4P [Brucella pinnipedialis B2/94]
 gi|261305087|gb|EEY08584.1| SSU ribosomal protein S4P [Brucella pinnipedialis M163/99/10]
 gi|261738019|gb|EEY26015.1| SSU ribosomal protein S4P [Brucella sp. F5/99]
 gi|261741901|gb|EEY29827.1| SSU ribosomal protein S4P [Brucella suis bv. 5 str. 513]
 gi|261744562|gb|EEY32488.1| SSU ribosomal protein S4P [Brucella suis bv. 3 str. 686]
 gi|262552449|gb|EEZ08439.1| SSU ribosomal protein S4P [Brucella ceti M490/95/1]
 gi|263094376|gb|EEZ18221.1| 30S ribosomal protein S4 [Brucella melitensis bv. 2 str. 63/9]
 gi|264660714|gb|EEZ30975.1| SSU ribosomal protein S4P [Brucella pinnipedialis M292/94/1]
 gi|306275956|gb|EFM57669.1| ribosomal protein S4 [Brucella sp. BO1]
 gi|306287968|gb|EFM59376.1| ribosomal protein S4 [Brucella sp. BO2]
 gi|326408851|gb|ADZ65916.1| 30S ribosomal protein S4 [Brucella melitensis M28]
 gi|326538567|gb|ADZ86782.1| ribosomal protein S4 [Brucella melitensis M5-90]
          Length = 205

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V M+PNLVVEFYSR
Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205


>gi|89053445|ref|YP_508896.1| 30S ribosomal protein S4 [Jannaschia sp. CCS1]
 gi|122499375|sp|Q28TU1|RS4_JANSC RecName: Full=30S ribosomal protein S4
 gi|88862994|gb|ABD53871.1| SSU ribosomal protein S4P [Jannaschia sp. CCS1]
          Length = 206

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 147/206 (71%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R RGDT   LI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAERLRGDTGEFLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVI V+ KSKQLA VLEA  LAERDVP+Y+  +H  M ATFV
Sbjct: 121 VTVNGQKVNIPSYRVKEGDVIAVRDKSKQLAVVLEAVGLAERDVPDYVDADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPG-LSDVPYPVVMEPNLVVEFYAK 205


>gi|298292130|ref|YP_003694069.1| ribosomal protein S4 [Starkeya novella DSM 506]
 gi|296928641|gb|ADH89450.1| ribosomal protein S4 [Starkeya novella DSM 506]
          Length = 205

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+KHK+DRR+GEN+WGRPKSP+N R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRVSAKHKLDRRMGENIWGRPKSPINKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY  I EK+F +++ EA R +GDT  NLI  LE RLD ++YRAKFVPT+FAARQFV+H H
Sbjct: 61  YYASIGEKQFYAVYVEASRLKGDTGANLIGLLERRLDAVIYRAKFVPTVFAARQFVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY+ K GDVIEVK+ SKQL  VLEA    ERDVP+Y+ V+H  M A F 
Sbjct: 121 IKVNGRRVNIPSYQVKVGDVIEVKEASKQLVLVLEAVASGERDVPDYLEVDHSKMTAKFA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L +VPYPV+M+PNLVVE+YSR
Sbjct: 181 RIPE-LNEVPYPVVMEPNLVVEYYSR 205


>gi|254475661|ref|ZP_05089047.1| ribosomal protein S4 [Ruegeria sp. R11]
 gi|214029904|gb|EEB70739.1| ribosomal protein S4 [Ruegeria sp. R11]
          Length = 206

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 147/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KSKQ+ ++LEA QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQMTALLEAVQLAERDVPDYIEADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RAPG-LADVPYPVVMEPNLVVEFYAK 205


>gi|260460839|ref|ZP_05809089.1| ribosomal protein S4 [Mesorhizobium opportunistum WSM2075]
 gi|259033416|gb|EEW34677.1| ribosomal protein S4 [Mesorhizobium opportunistum WSM2075]
          Length = 205

 Score =  237 bits (605), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 153/206 (74%), Positives = 176/206 (85%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGD+SEK+FR +++EADR +GDTS NLI  LESRLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  HYGDVSEKQFRKVYEEADRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNIGSYRCK GDV+EV++KSKQL  VLE+  LAERDVP+YI  +H+ MVATF 
Sbjct: 121 VNVNGKRVNIGSYRCKPGDVVEVREKSKQLVIVLESVGLAERDVPDYIEADHNKMVATFS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+ V M+PNLVVEFYSR
Sbjct: 181 RIPG-LADVPFAVQMEPNLVVEFYSR 205


>gi|13470363|ref|NP_101930.1| 30S ribosomal protein S4 [Mesorhizobium loti MAFF303099]
 gi|26399462|sp|Q98NP5|RS4_RHILO RecName: Full=30S ribosomal protein S4
 gi|14021103|dbj|BAB47716.1| 30S ribosomal protein S4 [Mesorhizobium loti MAFF303099]
          Length = 205

 Score =  237 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 154/206 (74%), Positives = 176/206 (85%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGD+SEK+FR +++EADR +GDTS NLI  LESRLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  HYGDVSEKQFRKVYEEADRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNIGSYRCK GDVIEV++KSKQL  VLE+  LAERDVP+YI  +H+ MVATF 
Sbjct: 121 VNVNGKRVNIGSYRCKPGDVIEVREKSKQLVIVLESVGLAERDVPDYIEADHNKMVATFS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+ V M+PNLVVEFYSR
Sbjct: 181 RIPG-LADVPFAVQMEPNLVVEFYSR 205


>gi|222148432|ref|YP_002549389.1| 30S ribosomal protein S4 [Agrobacterium vitis S4]
 gi|254764562|sp|B9JVV3|RS4_AGRVS RecName: Full=30S ribosomal protein S4
 gi|221735420|gb|ACM36383.1| 30S ribosomal protein S4 [Agrobacterium vitis S4]
          Length = 205

 Score =  237 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 158/206 (76%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR SSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRASSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+ + EA+R +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRATYDEANRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV+QKSKQLA VLEA+QLAERDVP+YI V+H+ MVATFV
Sbjct: 121 VSVNGVKVNIGSYRCKAGDVIEVRQKSKQLAIVLEATQLAERDVPDYIEVDHNKMVATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPY VIM+P LVVEFYSR
Sbjct: 181 RVPT-LSDVPYAVIMEPQLVVEFYSR 205


>gi|163745685|ref|ZP_02153045.1| 30S ribosomal protein S4 [Oceanibulbus indolifex HEL-45]
 gi|161382503|gb|EDQ06912.1| 30S ribosomal protein S4 [Oceanibulbus indolifex HEL-45]
          Length = 206

 Score =  237 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 144/206 (69%), Positives = 171/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++KHK+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTAAKHKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQLASVLEA QL ERDVP+Y+  +H  + ATFV
Sbjct: 121 VRVNGKKVNIPSYRVKEGDVIEVRDRSKQLASVLEAVQLPERDVPDYLETDHSKLTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPG-LSDVPYPVVMEPNLVVEFYAK 205


>gi|84686195|ref|ZP_01014090.1| 30S ribosomal protein S4 [Maritimibacter alkaliphilus HTCC2654]
 gi|84665722|gb|EAQ12197.1| 30S ribosomal protein S4 [Rhodobacterales bacterium HTCC2654]
          Length = 206

 Score =  237 bits (604), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 151/204 (74%), Positives = 173/204 (84%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT  NLI  LE RLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGDMTEKQFRRIFAEAERLKGDTGENLIGLLERRLDAVVYRAKFVPTIFAARQFVNHAH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V+VNG+ VNI SYR KEGDVIEV++KSKQLA VLEASQL ERDVP+Y+ V+H  M ATFV
Sbjct: 121 VMVNGQRVNIPSYRVKEGDVIEVREKSKQLAIVLEASQLPERDVPDYLEVDHSKMKATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+EFY
Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEFY 203


>gi|254486907|ref|ZP_05100112.1| ribosomal protein S4 [Roseobacter sp. GAI101]
 gi|214043776|gb|EEB84414.1| ribosomal protein S4 [Roseobacter sp. GAI101]
          Length = 206

 Score =  237 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 144/206 (69%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTAAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQ+A++LEA+QL ERDVP+Y+ V+H  M ATFV
Sbjct: 121 VKVNGKKVNIPSYRVKEGDVIEVRDRSKQMAALLEATQLPERDVPDYMEVDHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+ L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPA-LGDVPYPVVMEPNLVVEFYAK 205


>gi|126739832|ref|ZP_01755523.1| 30S ribosomal protein S4 [Roseobacter sp. SK209-2-6]
 gi|126719064|gb|EBA15775.1| 30S ribosomal protein S4 [Roseobacter sp. SK209-2-6]
          Length = 206

 Score =  237 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 146/206 (70%), Positives = 170/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA R  GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDMTEKQFRRIYAEAVRVNGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVI V+ KSKQLA ++EA+QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VTVNGKRVNIPSYRVKEGDVIAVRDKSKQLAVLIEATQLAERDVPDYIEADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPG-LGDVPYPVVMEPNLVVEFYAK 205


>gi|260429241|ref|ZP_05783218.1| ribosomal protein S4 [Citreicella sp. SE45]
 gi|260419864|gb|EEX13117.1| ribosomal protein S4 [Citreicella sp. SE45]
          Length = 206

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT   LI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFGEAERIKGDTGELLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KSKQ+A VLEA+QL ERDVP+Y+ V+H  M ATFV
Sbjct: 121 VLVNGQRVNIPSYRVKEGDVIEVREKSKQMALVLEAAQLPERDVPDYLEVDHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R+P  L DVPYPV M+PNLV+EFY
Sbjct: 181 RMPG-LADVPYPVQMEPNLVIEFY 203


>gi|86136443|ref|ZP_01055022.1| ribosomal protein S4 [Roseobacter sp. MED193]
 gi|85827317|gb|EAQ47513.1| ribosomal protein S4 [Roseobacter sp. MED193]
          Length = 206

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 145/206 (70%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTAAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI+EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDITEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVI V+ KSKQLA +LEA  L ERDVP+YI  +H  M ATFV
Sbjct: 121 VTVNGKRVNIASYRVKEGDVIAVRDKSKQLAVLLEAVALPERDVPDYIEADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RAPG-LADVPYPVVMEPNLVVEFYAK 205


>gi|23501717|ref|NP_697844.1| 30S ribosomal protein S4 [Brucella suis 1330]
 gi|26399355|sp|P59128|RS4_BRUSU RecName: Full=30S ribosomal protein S4
 gi|23347642|gb|AAN29759.1| ribosomal protein S4 [Brucella suis 1330]
          Length = 205

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V M+PNLVVEFYSR
Sbjct: 181 RVPGLL-DVPYAVQMEPNLVVEFYSR 205


>gi|254451859|ref|ZP_05065296.1| ribosomal protein S4 [Octadecabacter antarcticus 238]
 gi|198266265|gb|EDY90535.1| ribosomal protein S4 [Octadecabacter antarcticus 238]
          Length = 206

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 142/204 (69%), Positives = 168/204 (82%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGMQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRKIFTEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGD+IEV+  SKQ  +VL+A  LAERDVP+Y+ V+H  M ATFV
Sbjct: 121 VTVNGKKVNIPSYRVKEGDIIEVRDSSKQNVAVLDAIGLAERDVPDYMDVDHSKMSATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+E+Y
Sbjct: 181 RTPG-LGDVPYPVMMEPNLVIEYY 203


>gi|146278250|ref|YP_001168409.1| 30S ribosomal protein S4 [Rhodobacter sphaeroides ATCC 17025]
 gi|172046018|sp|A4WUP0|RS4_RHOS5 RecName: Full=30S ribosomal protein S4
 gi|145556491|gb|ABP71104.1| SSU ribosomal protein S4P [Rhodobacter sphaeroides ATCC 17025]
          Length = 206

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 148/206 (71%), Positives = 177/206 (85%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FG QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT   L+  LE RLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRKIYAEAERVKGDTGEMLVGLLERRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNIGSYRCKEGDVI+V+++S+QLA VLEA+QLAERDVP+YI V++  M ATFV
Sbjct: 121 VTVNGQRVNIGSYRCKEGDVIQVRERSRQLAIVLEATQLAERDVPDYIEVDYSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R PS L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPS-LGDVPYPVVMEPNLVVEFYAK 205


>gi|163737823|ref|ZP_02145240.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107]
 gi|163742871|ref|ZP_02150255.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis 2.10]
 gi|161383835|gb|EDQ08220.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis 2.10]
 gi|161389349|gb|EDQ13701.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107]
          Length = 206

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 145/206 (70%), Positives = 173/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYSEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KSKQ+ ++LEA QLAERDVP+Y+  +H  M ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQMTALLEAVQLAERDVPDYVEADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RAPG-LSDVPYPVVMEPNLVVEFYAK 205


>gi|294852185|ref|ZP_06792858.1| 30S ribosomal protein S4 [Brucella sp. NVSL 07-0026]
 gi|294820774|gb|EFG37773.1| 30S ribosomal protein S4 [Brucella sp. NVSL 07-0026]
          Length = 205

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 152/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V M+PNLVVEFYSR
Sbjct: 181 RVPG-LSDVPYVVQMEPNLVVEFYSR 205


>gi|256060939|ref|ZP_05451097.1| 30S ribosomal protein S4 [Brucella neotomae 5K33]
 gi|261324939|ref|ZP_05964136.1| 30S ribosomal protein S4 [Brucella neotomae 5K33]
 gi|261300919|gb|EEY04416.1| 30S ribosomal protein S4 [Brucella neotomae 5K33]
          Length = 205

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 151/206 (73%), Positives = 173/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAVVLEAVQLAERDVPDYIDVDHNKMVATYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V  +PNLVVEFYSR
Sbjct: 181 RVPG-LSDVPYAVQTEPNLVVEFYSR 205


>gi|84514475|ref|ZP_01001839.1| 30S ribosomal protein S4 [Loktanella vestfoldensis SKA53]
 gi|84511526|gb|EAQ07979.1| 30S ribosomal protein S4 [Loktanella vestfoldensis SKA53]
          Length = 206

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 147/206 (71%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRTAAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+QKSKQL  VL A+QLAERDVP+Y+ V+H+ M+ATFV
Sbjct: 121 VTVNGQRVNIPSYRVKEGDVIEVRQKSKQLEIVLVAAQLAERDVPDYMEVDHNKMIATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+ L DVPYPV M+PNLVVEFY++
Sbjct: 181 RTPT-LGDVPYPVTMEPNLVVEFYAK 205


>gi|150396726|ref|YP_001327193.1| 30S ribosomal protein S4 [Sinorhizobium medicae WSM419]
 gi|171460831|sp|A6U9M8|RS4_SINMW RecName: Full=30S ribosomal protein S4
 gi|150028241|gb|ABR60358.1| RNA-binding S4 domain protein [Sinorhizobium medicae WSM419]
          Length = 205

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 159/206 (77%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI EK+FR+IF EA R +GDT  NL+  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDIREKQFRAIFAEASRRKGDTPENLVGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEVK+ SKQL +VLEA QLAERDVP+YI  +H+ MVATFV
Sbjct: 121 VKVNGVRVNIGSYRCKPGDVIEVKESSKQLVTVLEAVQLAERDVPDYIEADHNKMVATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYPVIM+P+LVVEFYSR
Sbjct: 181 RVPA-LADVPYPVIMEPHLVVEFYSR 205


>gi|118588602|ref|ZP_01546010.1| 30S ribosomal protein S4 [Stappia aggregata IAM 12614]
 gi|118438588|gb|EAV45221.1| 30S ribosomal protein S4 [Stappia aggregata IAM 12614]
          Length = 205

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 145/206 (70%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S K+KIDRR+GEN+WGRPKSP N R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRHSVKYKIDRRMGENIWGRPKSPANKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR ++ EA R +GDTS NLI  LE RLD IVYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYGNISEKQFRKVYAEASRMKGDTSENLIGLLERRLDAIVYRAKFVPTVFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY+ + GDVIEV++KSKQLA VLEA Q AERDVP+Y+ V+H+ M AT+ 
Sbjct: 121 VKVNGKRVNISSYQIRPGDVIEVREKSKQLALVLEAVQSAERDVPDYLDVDHNKMTATYS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P    DVPYPV M+PNLVVEFYSR
Sbjct: 181 RVPG-FSDVPYPVQMEPNLVVEFYSR 205


>gi|241204876|ref|YP_002975972.1| 30S ribosomal protein S4 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858766|gb|ACS56433.1| ribosomal protein S4 [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 205

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 157/206 (76%), Positives = 177/206 (85%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+IF EADR +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV++KSKQL  VLEA  LAERDVP+YI V+H  MVATF 
Sbjct: 121 VSVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLEAVSLAERDVPDYIEVDHSKMVATFG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVP+PV+M+P+LVVEFYSR
Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205


>gi|126733337|ref|ZP_01749084.1| 30S ribosomal protein S4 [Roseobacter sp. CCS2]
 gi|126716203|gb|EBA13067.1| 30S ribosomal protein S4 [Roseobacter sp. CCS2]
          Length = 206

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 146/206 (70%), Positives = 170/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRTAAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+QKSKQL  VL ASQL ERDVP+Y+ V+H+ M ATF 
Sbjct: 121 VTVNGKKVNIPSYRVKEGDVIEVRQKSKQLELVLVASQLPERDVPDYMDVDHNKMTATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVEFY++
Sbjct: 181 RTPG-LGDVPYPVTMEPNLVVEFYAK 205


>gi|86357927|ref|YP_469819.1| 30S ribosomal protein S4 [Rhizobium etli CFN 42]
 gi|123511793|sp|Q2K7U4|RS4_RHIEC RecName: Full=30S ribosomal protein S4
 gi|86282029|gb|ABC91092.1| 30S ribosomal protein S4 [Rhizobium etli CFN 42]
          Length = 205

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 156/206 (75%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+IF EA R +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRAIFAEAARRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV++KSKQL +VLEA  LAERDVP+YI V+H+ MVATF 
Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVTVLEAVSLAERDVPDYIEVDHNKMVATFG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVP+PV+M+P+LVVEFYSR
Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205


>gi|83854847|ref|ZP_00948377.1| 30S ribosomal protein S4 [Sulfitobacter sp. NAS-14.1]
 gi|83941370|ref|ZP_00953832.1| 30S ribosomal protein S4 [Sulfitobacter sp. EE-36]
 gi|83842690|gb|EAP81857.1| 30S ribosomal protein S4 [Sulfitobacter sp. NAS-14.1]
 gi|83847190|gb|EAP85065.1| 30S ribosomal protein S4 [Sulfitobacter sp. EE-36]
          Length = 206

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 144/206 (69%), Positives = 173/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTAAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQ+ ++LEA+QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VKVNGKKVNIPSYRVKEGDVIEVRDRSKQMVALLEATQLAERDVPDYIEADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+ L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPA-LGDVPYPVMMEPNLVVEFYAK 205


>gi|256369260|ref|YP_003106768.1| 30S ribosomal protein S4 [Brucella microti CCM 4915]
 gi|255999420|gb|ACU47819.1| 30S ribosomal protein S4 [Brucella microti CCM 4915]
          Length = 205

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 151/206 (73%), Positives = 173/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MV T+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVTTYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V M+PNLVVEFYSR
Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVEFYSR 205


>gi|209549541|ref|YP_002281458.1| 30S ribosomal protein S4 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226699111|sp|B5ZRF1|RS4_RHILW RecName: Full=30S ribosomal protein S4
 gi|209535297|gb|ACI55232.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 205

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 157/206 (76%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+IF EADR +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV++KSKQL  VLEA  LAERDVP+YI V+H+ MVATF 
Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLEAVSLAERDVPDYIEVDHNKMVATFG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVP+PV+M+P+LVVEFYSR
Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205


>gi|312112941|ref|YP_004010537.1| ribosomal protein S4 [Rhodomicrobium vannielii ATCC 17100]
 gi|311218070|gb|ADP69438.1| ribosomal protein S4 [Rhodomicrobium vannielii ATCC 17100]
          Length = 205

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 141/206 (68%), Positives = 168/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+KHKIDRR+GENLWGRPKSP+N R YGPG HGQRR+ K S FG QL+AKQK+K 
Sbjct: 1   MTKRASAKHKIDRRLGENLWGRPKSPLNKREYGPGQHGQRRRGKTSDFGTQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+E++FR I+ EA R RGDTS NLI  LE RLD +VYRAKFV T FAARQF++H H
Sbjct: 61  YYGNITERQFRLIYAEATRLRGDTSENLIGLLERRLDAVVYRAKFVATPFAARQFISHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SYRC+ GDVIEV++K+K LA VLEA+Q AERDVP+Y+ V+H  + A   
Sbjct: 121 ISVNGRRVNIPSYRCRAGDVIEVREKAKPLAFVLEATQSAERDVPDYLEVDHGKLTARLS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVPYPV+M+PNLVVEFYSR
Sbjct: 181 RIPQ-LSDVPYPVVMEPNLVVEFYSR 205


>gi|190891998|ref|YP_001978540.1| 30S ribosomal protein S4 [Rhizobium etli CIAT 652]
 gi|218509562|ref|ZP_03507440.1| 30S ribosomal protein S4 [Rhizobium etli Brasil 5]
 gi|218516811|ref|ZP_03513651.1| 30S ribosomal protein S4 [Rhizobium etli 8C-3]
 gi|218679612|ref|ZP_03527509.1| 30S ribosomal protein S4 [Rhizobium etli CIAT 894]
 gi|226699110|sp|B3PPT3|RS4_RHIE6 RecName: Full=30S ribosomal protein S4
 gi|190697277|gb|ACE91362.1| 30S ribosomal protein S4 [Rhizobium etli CIAT 652]
 gi|327190532|gb|EGE57626.1| 30S ribosomal protein S4 [Rhizobium etli CNPAF512]
          Length = 205

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 157/206 (76%), Positives = 179/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+IF EADR +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV++KSKQL +VLEA  LAERDVP+YI V+H+ MVATF 
Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVTVLEAVSLAERDVPDYIEVDHNKMVATFG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVP+PV+M+P+LVVEFYSR
Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205


>gi|153009724|ref|YP_001370939.1| 30S ribosomal protein S4 [Ochrobactrum anthropi ATCC 49188]
 gi|171704561|sp|A6X1K6|RS4_OCHA4 RecName: Full=30S ribosomal protein S4
 gi|151561612|gb|ABS15110.1| RNA-binding S4 domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 205

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 149/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VN+ SYR K GDV+EV++KSKQL  VLEA QLAERDVP+YI V+H+ +VAT+ 
Sbjct: 121 VNVNGRRVNVQSYRLKTGDVVEVREKSKQLVIVLEAVQLAERDVPDYIEVDHNKLVATYS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPY V M+PNLVVEFYSR
Sbjct: 181 RVPT-LTDVPYAVQMEPNLVVEFYSR 205


>gi|116252370|ref|YP_768208.1| 30S ribosomal protein S4 [Rhizobium leguminosarum bv. viciae 3841]
 gi|152112254|sp|Q1MG11|RS4_RHIL3 RecName: Full=30S ribosomal protein S4
 gi|115257018|emb|CAK08112.1| putative 30S ribosomal protein S4 [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 205

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 157/206 (76%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+IF EADR +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRAIFAEADRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV++KSKQL  VLEA  LAERDVP+YI V+H+ MVATF 
Sbjct: 121 VSVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLEAVSLAERDVPDYIEVDHNKMVATFG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVP+PV+M+P+LVVEFYSR
Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205


>gi|114766790|ref|ZP_01445724.1| 30S ribosomal protein S4 [Pelagibaca bermudensis HTCC2601]
 gi|114540984|gb|EAU44042.1| 30S ribosomal protein S4 [Roseovarius sp. HTCC2601]
          Length = 206

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 147/204 (72%), Positives = 171/204 (83%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGR KSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRAKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT  +LI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFGEAERLKGDTGEHLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KSKQLA VLEA+QL ERDVP+Y+ V+H  M A+FV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSKQLAVVLEAAQLPERDVPDYLEVDHSKMTASFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV M+PNLV+EFY
Sbjct: 181 RTPG-LADVPYPVQMEPNLVIEFY 203


>gi|119387008|ref|YP_918063.1| 30S ribosomal protein S4 [Paracoccus denitrificans PD1222]
 gi|152112241|sp|A1BA23|RS4_PARDP RecName: Full=30S ribosomal protein S4
 gi|119377603|gb|ABL72367.1| SSU ribosomal protein S4P [Paracoccus denitrificans PD1222]
          Length = 206

 Score =  235 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 170/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++K+KIDRR+GEN+WGR KSP+N R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRTAAKYKIDRRMGENIWGRAKSPLNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD ++YRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVIYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDV+ ++++S+QLA VLE+  LAERDVP+Y+ V+H+ M ATFV
Sbjct: 121 VEVNGKRVNIASYRVKEGDVVSIRERSRQLAIVLESVGLAERDVPDYLEVDHNKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+ L DVPY V M+PNLVVEFY++
Sbjct: 181 RTPA-LGDVPYAVQMEPNLVVEFYAK 205


>gi|154248016|ref|YP_001418974.1| 30S ribosomal protein S4 [Xanthobacter autotrophicus Py2]
 gi|226701078|sp|A7IMS4|RS4_XANP2 RecName: Full=30S ribosomal protein S4
 gi|154162101|gb|ABS69317.1| RNA-binding S4 domain protein [Xanthobacter autotrophicus Py2]
          Length = 205

 Score =  235 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR ++KHKIDRR+GEN+WGR KSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRIAAKHKIDRRMGENIWGRSKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG I EK+F  ++ EA R +GDT  NLI  LE RLD +VYRAKFVPTIFAARQFV+H H
Sbjct: 61  YYGSIGEKQFHKVYVEASRLKGDTGANLIGLLERRLDAVVYRAKFVPTIFAARQFVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY  K GDV+EVK+ S+Q+  VLEA QL ERDVP+YI ++   + A F 
Sbjct: 121 VKVNGQRVNIPSYLVKVGDVVEVKEASRQMTLVLEAQQLGERDVPDYIELDAGKLAARFA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L +VPYPV M+PNLVVEFYSR
Sbjct: 181 RIPE-LNEVPYPVQMEPNLVVEFYSR 205


>gi|254459623|ref|ZP_05073039.1| ribosomal protein S4 [Rhodobacterales bacterium HTCC2083]
 gi|206676212|gb|EDZ40699.1| ribosomal protein S4 [Rhodobacteraceae bacterium HTCC2083]
          Length = 206

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 144/204 (70%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKAKVSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+ IFKEADR +GDT  NLI  LE RLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGDLTEKQFKKIFKEADRVKGDTGENLIGLLERRLDAVVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDV+EV+ +SKQ+A++LEA QL ERDVP+Y+ V+H  + ATF 
Sbjct: 121 VRVNGKKVNIASYRVKEGDVVEVRDRSKQMAAILEAVQLPERDVPDYMDVDHSKLTATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+E+Y
Sbjct: 181 RTPG-LSDVPYPVLMEPNLVIEYY 203


>gi|15965540|ref|NP_385893.1| 30S ribosomal protein S4 [Sinorhizobium meliloti 1021]
 gi|307302660|ref|ZP_07582416.1| ribosomal protein S4 [Sinorhizobium meliloti BL225C]
 gi|307318507|ref|ZP_07597941.1| ribosomal protein S4 [Sinorhizobium meliloti AK83]
 gi|26399445|sp|Q92PG9|RS4_RHIME RecName: Full=30S ribosomal protein S4
 gi|15074721|emb|CAC46366.1| Probable 30S ribosomal subunit protein S4 [Sinorhizobium meliloti
           1021]
 gi|306895847|gb|EFN26599.1| ribosomal protein S4 [Sinorhizobium meliloti AK83]
 gi|306903024|gb|EFN33615.1| ribosomal protein S4 [Sinorhizobium meliloti BL225C]
          Length = 205

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 159/206 (77%), Positives = 179/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI EK+FR+IF EA R +GDT  NL+  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDIREKQFRAIFAEASRRKGDTPENLVGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEVK+KSKQL +VLEA QLAERDVP+YI  +H+ MVATFV
Sbjct: 121 VKVNGVRVNIGSYRCKPGDVIEVKEKSKQLVTVLEAVQLAERDVPDYIEADHNKMVATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYPV+M+P+LVVEFYSR
Sbjct: 181 RVPA-LSDVPYPVVMEPHLVVEFYSR 205


>gi|254510000|ref|ZP_05122067.1| ribosomal protein S4 [Rhodobacteraceae bacterium KLH11]
 gi|221533711|gb|EEE36699.1| ribosomal protein S4 [Rhodobacteraceae bacterium KLH11]
          Length = 206

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 148/206 (71%), Positives = 168/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA R  GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAVRVNGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ KSKQLA VLEA  LAERDVP+YI  +H  M ATFV
Sbjct: 121 VKVNGKRVNIPSYRVKEGDVIEVRDKSKQLAVVLEAVALAERDVPDYIDADHSKMAATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RAPG-LGDVPYPVVMEPNLVVEFYAK 205


>gi|84500119|ref|ZP_00998385.1| 30S ribosomal protein S4 [Oceanicola batsensis HTCC2597]
 gi|84392053|gb|EAQ04321.1| 30S ribosomal protein S4 [Oceanicola batsensis HTCC2597]
          Length = 206

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 144/204 (70%), Positives = 171/204 (83%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+ I+ EA R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFKRIYSEAARVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KS+Q+A VLEA+QL ERDVP+Y+  +H  M ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKEGDVIEVREKSRQMALVLEAAQLPERDVPDYLDADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+E+Y
Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEYY 203


>gi|254470314|ref|ZP_05083718.1| ribosomal protein S4 [Pseudovibrio sp. JE062]
 gi|211960625|gb|EEA95821.1| ribosomal protein S4 [Pseudovibrio sp. JE062]
          Length = 205

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 150/206 (72%), Positives = 172/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+S+K+KIDRR+GEN+WGRPKSP N R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRQSAKYKIDRRMGENIWGRPKSPANRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR ++ EA R RGDTS NLI  LE RLD IVYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYGNISEKQFRKVYDEASRQRGDTSENLIGLLECRLDAIVYRAKFVPTVFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNIGSY CK GDVIEV++KSKQLA VLEA Q AERD P+YI V+ + +VAT+ 
Sbjct: 121 VNVNGRRVNIGSYMCKPGDVIEVREKSKQLAIVLEAVQSAERDTPDYIDVDTNKLVATYS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPYPV M+PNLVVEFYSR
Sbjct: 181 RIPA-FGDVPYPVQMEPNLVVEFYSR 205


>gi|218462357|ref|ZP_03502448.1| 30S ribosomal protein S4 [Rhizobium etli Kim 5]
          Length = 205

 Score =  234 bits (597), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 155/206 (75%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+IF EA R +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRAIFAEASRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV++KSKQL +VLEA  LAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVTVLEAVSLAERDVPDYIEVDHNKMVATYG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVP+PV+M+P+LVVEFYSR
Sbjct: 181 RVPT-LSDVPFPVVMEPHLVVEFYSR 205


>gi|58040211|ref|YP_192175.1| 30S ribosomal protein S4 [Gluconobacter oxydans 621H]
 gi|81672625|sp|Q5FQ27|RS4_GLUOX RecName: Full=30S ribosomal protein S4
 gi|58002625|gb|AAW61519.1| SSU ribosomal protein S4P [Gluconobacter oxydans 621H]
          Length = 205

 Score =  234 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 137/206 (66%), Positives = 157/206 (76%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K 
Sbjct: 1   MSKRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKQKPSDFSIQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  + EA R +GDTS NLI  LE RLD +VYR KF  T FA+RQF++H H
Sbjct: 61  YYGNISEKQFRKYYDEAVRRKGDTSENLIGLLERRLDAVVYRLKFAITPFASRQFISHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY  KEGDVIEV+  SKQLA VL+A Q  ERD PEY+ V+H  M  TF+
Sbjct: 121 VTVNGKKVNIPSYLVKEGDVIEVRDSSKQLAIVLDAVQTGERDTPEYVEVDHRQMKGTFL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVEFYSR
Sbjct: 181 RTPV-LSDVPYPVQMEPNLVVEFYSR 205


>gi|222086151|ref|YP_002544683.1| ribosomal protein S4 [Agrobacterium radiobacter K84]
 gi|254764561|sp|B9JFR5|RS4_AGRRK RecName: Full=30S ribosomal protein S4
 gi|221723599|gb|ACM26755.1| ribosomal protein S4 [Agrobacterium radiobacter K84]
          Length = 205

 Score =  234 bits (596), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 154/206 (74%), Positives = 175/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR+ F EA+R +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLREKQFRATFDEANRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV++KSKQL  VLE+  LAERDVP+YI V+H+ MVATF 
Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVREKSKQLVIVLESVSLAERDVPDYIEVDHNKMVATFA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPY V+M+P LVVEFYSR
Sbjct: 181 RVPT-LADVPYAVVMEPQLVVEFYSR 205


>gi|254504798|ref|ZP_05116949.1| ribosomal protein S4 [Labrenzia alexandrii DFL-11]
 gi|222440869|gb|EEE47548.1| ribosomal protein S4 [Labrenzia alexandrii DFL-11]
          Length = 205

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 141/206 (68%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRHSVKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR ++ EA R +GDTS NLI  LE RLD ++YRAKFVPT+FAARQF+NH H
Sbjct: 61  YYGNISEKQFRKVYAEASRLKGDTSENLIGLLERRLDAVIYRAKFVPTVFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY+ + GDV+EV+++SKQLA VLEA Q AERDVP+Y+  +H  M AT+ 
Sbjct: 121 VKVNGKRVNIPSYQLRPGDVVEVRERSKQLAIVLEAVQSAERDVPDYVDADHAKMTATYS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+   DVPYPV M+PNLVVEFYSR
Sbjct: 181 RVPA-FSDVPYPVQMEPNLVVEFYSR 205


>gi|126728329|ref|ZP_01744145.1| 30S ribosomal protein S4 [Sagittula stellata E-37]
 gi|126711294|gb|EBA10344.1| 30S ribosomal protein S4 [Sagittula stellata E-37]
          Length = 206

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 143/204 (70%), Positives = 175/204 (85%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTTAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKQKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF +A+R++GDT   LI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFSDAERAKGDTGELLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR KEGDVIEV++KSKQ+A++LEA+QL ERDVP+YI V+H+ + A+FV
Sbjct: 121 VLVNGQRVNIPSYRVKEGDVIEVREKSKQMAAILEATQLPERDVPDYIEVDHNKLTASFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+E+Y
Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEYY 203


>gi|110680562|ref|YP_683569.1| 30S ribosomal protein S4 [Roseobacter denitrificans OCh 114]
 gi|122972607|sp|Q163G0|RS4_ROSDO RecName: Full=30S ribosomal protein S4
 gi|109456678|gb|ABG32883.1| ribosomal protein S4 [Roseobacter denitrificans OCh 114]
          Length = 206

 Score =  233 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 144/206 (69%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH+H
Sbjct: 61  YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVATVFAARQFVNHKH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQ+ +++EA+QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VRVNGKIVNIPSYRVKEGDVIEVRDRSKQMVALIEATQLAERDVPDYIEADHSKMQATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+ L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPA-LGDVPYPVMMEPNLVVEFYAK 205


>gi|27380817|ref|NP_772346.1| 30S ribosomal protein S4 [Bradyrhizobium japonicum USDA 110]
 gi|41017838|sp|Q89ID3|RS4_BRAJA RecName: Full=30S ribosomal protein S4
 gi|27353982|dbj|BAC50971.1| 30S ribosomal protein S4 [Bradyrhizobium japonicum USDA 110]
          Length = 205

 Score =  233 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 165/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F  I+ EA R +GDT  NLI  LE RLD +VYRAKFV TIFAARQF+NH H
Sbjct: 61  YYANISERQFHGIYVEASRLKGDTGENLIGLLERRLDAVVYRAKFVSTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY+ K GDV+EVK+ SKQLA VLEASQL ERD P+Y+ V+H  M A ++
Sbjct: 121 IKVNGRKVNISSYQLKVGDVVEVKEASKQLAHVLEASQLPERDTPDYLDVDHGKMTAKYI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+PV M+P+LVVEFYSR
Sbjct: 181 RIPG-LSDVPFPVQMEPHLVVEFYSR 205


>gi|329113307|ref|ZP_08242088.1| 30S ribosomal protein S4 [Acetobacter pomorum DM001]
 gi|326697132|gb|EGE48792.1| 30S ribosomal protein S4 [Acetobacter pomorum DM001]
          Length = 236

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 165/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K 
Sbjct: 32  MSKRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKGKPSDFSVQLMAKQKLKG 91

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+FR  ++EA R +GDTS NLI+ LE RLD +VYR KF  T FA+RQF++H H
Sbjct: 92  YYGNITEKQFRRYYQEAVRRKGDTSENLINLLERRLDAVVYRMKFAITPFASRQFISHGH 151

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ +NI SY  K+GDVIEV++KSKQLA VL+A+Q AERDVPEY+ V+H  M  T++
Sbjct: 152 ILVNGKKMNIPSYLVKDGDVIEVREKSKQLAIVLDAAQSAERDVPEYMEVDHRQMKGTYL 211

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVE+YSR
Sbjct: 212 RGPQ-LSDVPYPVQMEPNLVVEYYSR 236


>gi|163759587|ref|ZP_02166672.1| 30S ribosomal protein S4 [Hoeflea phototrophica DFL-43]
 gi|162283184|gb|EDQ33470.1| 30S ribosomal protein S4 [Hoeflea phototrophica DFL-43]
          Length = 205

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 154/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDISEK+FR I+ EA+R +GDT  NLI  LESRLD IVYRAKFV TIFAARQFVNH H
Sbjct: 61  YYGDISEKQFRKIYDEANRMKGDTPENLIGLLESRLDAIVYRAKFVATIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG   NIGSYRCK GDVIEVK+KSKQL  VLE+  LAERDVPEY+  +H+ MVAT+ 
Sbjct: 121 VKVNGVRTNIGSYRCKPGDVIEVKEKSKQLTLVLESVGLAERDVPEYVEADHNKMVATYT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYPV M+PNLVVEFYSR
Sbjct: 181 RVPN-LSDVPYPVQMEPNLVVEFYSR 205


>gi|121602011|ref|YP_989114.1| 30S ribosomal protein S4 [Bartonella bacilliformis KC583]
 gi|152060935|sp|A1UT11|RS4_BARBK RecName: Full=30S ribosomal protein S4
 gi|120614188|gb|ABM44789.1| ribosomal protein S4 [Bartonella bacilliformis KC583]
          Length = 205

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 149/206 (72%), Positives = 171/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRRIGEN+WGRPKSPVN R YGPG HGQRRK K S +G+QL AKQK+K 
Sbjct: 1   MSKRESAKYKIDRRIGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLCAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR I++EA R RGDT  NLI  LESRLD IVYR+KFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKIYQEAVRRRGDTGENLIGLLESRLDAIVYRSKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIE++++SKQL  VLEA+QL ERDVP+YI  +H  M ATFV
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEIRERSKQLLLVLEATQLNERDVPDYIEADHSKMKATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FSDVPYAVQMEPNLVVEFYSR 205


>gi|319404221|emb|CBI77814.1| 30S ribosomal protein S4 [Bartonella rochalimae ATCC BAA-1498]
          Length = 205

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 150/206 (72%), Positives = 172/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRE++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRETTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R RGDT  NLI  LESRLD +VYRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAVVYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLE+ QLAERD+PEYI V+H+ M ATF 
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESIQLAERDIPEYIDVDHNKMKATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FADVPYAVHMEPNLVVEFYSR 205


>gi|256044506|ref|ZP_05447410.1| 30S ribosomal protein S4 [Brucella melitensis bv. 1 str. Rev.1]
 gi|265990930|ref|ZP_06103487.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. Rev.1]
 gi|263001714|gb|EEZ14289.1| SSU ribosomal protein S4P [Brucella melitensis bv. 1 str. Rev.1]
          Length = 205

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 151/206 (73%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPY V M+PNLVV+FYSR
Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVKFYSR 205


>gi|149913680|ref|ZP_01902213.1| 30S ribosomal protein S4 [Roseobacter sp. AzwK-3b]
 gi|149812800|gb|EDM72629.1| 30S ribosomal protein S4 [Roseobacter sp. AzwK-3b]
          Length = 206

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF++A+R RGDT   L+  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFRDAERQRGDTGELLVGLLERRLDAVVYRAKFVPTMFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR +EGDVIEV+ +SKQLA +LEA QLAERDVP+Y+ V+H  MVATFV
Sbjct: 121 VRVNGRKVNIPSYRVQEGDVIEVRNRSKQLAVLLEAVQLAERDVPDYLEVDHSKMVATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPVIM+PNLV+EFY
Sbjct: 181 RTPG-LADVPYPVIMEPNLVIEFY 203


>gi|307945603|ref|ZP_07660939.1| ribosomal protein S4 [Roseibium sp. TrichSKD4]
 gi|307771476|gb|EFO30701.1| ribosomal protein S4 [Roseibium sp. TrichSKD4]
          Length = 205

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 141/206 (68%), Positives = 166/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S K+KIDRR+GEN+WGRPKSP N R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRHSVKYKIDRRMGENIWGRPKSPANKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+F  ++ EA R +GDTS NLI  LE RLD I+YRAKFVPT+FAARQF+NH H
Sbjct: 61  YYGNISEKQFHKVYVEASRMKGDTSENLIGLLERRLDAIIYRAKFVPTVFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SYR + GDVIEV++KSKQ+  VLEA Q AERDVP+Y+  +H  M AT+ 
Sbjct: 121 IKVNGKRVNIPSYRVRPGDVIEVREKSKQMGLVLEAVQSAERDVPDYVDADHAKMTATYS 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+PS   DVPYPV M+PNLVVEFYSR
Sbjct: 181 RVPS-FADVPYPVQMEPNLVVEFYSR 205


>gi|148256683|ref|YP_001241268.1| 30S ribosomal protein S4 [Bradyrhizobium sp. BTAi1]
 gi|172047313|sp|A5EMG8|RS4_BRASB RecName: Full=30S ribosomal protein S4
 gi|146408856|gb|ABQ37362.1| SSU ribosomal protein S4P [Bradyrhizobium sp. BTAi1]
          Length = 205

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F  I+ EA R +GDT  NLI  LE RLDT+V+RAKFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHGIYVEAGRLKGDTGENLIGILERRLDTVVFRAKFVSTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY+ K GDVIEVK+ SKQLA VLEA+QLAERDVP+YI  +H  M A F+
Sbjct: 121 IKVNGRKVNIASYQVKPGDVIEVKEASKQLAIVLEATQLAERDVPDYIEADHSKMTAKFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205


>gi|319407231|emb|CBI80870.1| 30S ribosomal protein S4 [Bartonella sp. 1-1C]
          Length = 205

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 152/206 (73%), Positives = 172/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRE++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRETTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R RGDT  NLI  LESRLD IVYRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLE+ QLAERDVPEYI V+H+ M ATF 
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPEYIDVDHNKMKATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FADVPYAVHMEPNLVVEFYSR 205


>gi|146339797|ref|YP_001204845.1| 30S ribosomal protein S4 [Bradyrhizobium sp. ORS278]
 gi|172046996|sp|A4YRT2|RS4_BRASO RecName: Full=30S ribosomal protein S4
 gi|146192603|emb|CAL76608.1| 30S ribosomal subunit protein S4 [Bradyrhizobium sp. ORS278]
          Length = 205

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F  I+ EA R +GDT  NLI  LE RLDT+V+RAKFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHGIYVEAGRLKGDTGENLIGILERRLDTVVFRAKFVSTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY+ K GDVIEVK+ SKQLA VLEA+QLAERDVP+YI  +H  M A F+
Sbjct: 121 IKVNGRKVNIASYQVKPGDVIEVKEASKQLAVVLEATQLAERDVPDYIEADHSKMTAKFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205


>gi|328543189|ref|YP_004303298.1| 30S ribosomal protein S4 [Polymorphum gilvum SL003B-26A1]
 gi|326412935|gb|ADZ69998.1| 30S ribosomal protein S4 [Polymorphum gilvum SL003B-26A1]
          Length = 205

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 146/206 (70%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRHSVKHKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+F+ ++ EA R +GDTS NLI  LE RLD IVYRAKFVPT+FAARQFV+H H
Sbjct: 61  YYGNISEKQFQKVYTEASRMKGDTSENLIGLLERRLDAIVYRAKFVPTVFAARQFVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V IGSYRC+ GDVIEV+++SKQ+  VLEA+Q  ERDVP+YI  +H  M ATF 
Sbjct: 121 VKVNGKRVTIGSYRCRPGDVIEVRERSKQMVLVLEAAQSGERDVPDYIDADHGKMTATFA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIPS   +VPYPV M+PNLVVEFYSR
Sbjct: 181 RIPS-FSEVPYPVQMEPNLVVEFYSR 205


>gi|227822183|ref|YP_002826154.1| 30S ribosomal protein S4 [Sinorhizobium fredii NGR234]
 gi|254764606|sp|C3MD82|RS4_RHISN RecName: Full=30S ribosomal protein S4
 gi|227341183|gb|ACP25401.1| 30S ribosomal protein S4 [Sinorhizobium fredii NGR234]
          Length = 205

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 160/206 (77%), Positives = 179/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRKSK S FG+QLRAKQK+K 
Sbjct: 1   MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI EK+FR+IF EA R +GDT  NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDIREKQFRAIFAEASRRKGDTPENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEVK+KSKQL SVLE+ QLAERDVP+YI  +H+ MVATFV
Sbjct: 121 VKVNGVRVNIGSYRCKAGDVIEVKEKSKQLVSVLESVQLAERDVPDYIEADHNKMVATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYPV+M+P+LVVEFYSR
Sbjct: 181 RVPA-LTDVPYPVVMEPHLVVEFYSR 205


>gi|163793622|ref|ZP_02187597.1| Ribosomal protein S4 [alpha proteobacterium BAL199]
 gi|159181424|gb|EDP65939.1| Ribosomal protein S4 [alpha proteobacterium BAL199]
          Length = 204

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 134/206 (65%), Positives = 167/206 (81%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KRE +KHKIDRR+G NLWGRPKSP+N R YGPG HGQRR+ KPS +G+QL AKQK+K 
Sbjct: 1   MAKREQAKHKIDRRLGVNLWGRPKSPLNNREYGPGQHGQRRR-KPSDYGIQLMAKQKLKG 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I EK+FR  + EA R RGDT  NL+  LESRLD ++YR KFVPT+FAARQFV+H H
Sbjct: 60  YYGNIGEKQFRKYYAEAVRRRGDTGENLVGILESRLDAVIYRMKFVPTVFAARQFVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VN+ S+  K+GDVIEVK+KS++L  VLEA Q +ERD+P+Y+ V+H  M  TF+
Sbjct: 120 VKVNGRRVNVPSFMVKDGDVIEVKEKSRELPMVLEAVQSSERDLPDYMEVDHSAMKGTFL 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L+DVPYPV M+PNLV+E+YSR
Sbjct: 180 RLP-KLEDVPYPVQMEPNLVIEYYSR 204


>gi|330993329|ref|ZP_08317264.1| 30S ribosomal protein S4 [Gluconacetobacter sp. SXCC-1]
 gi|329759359|gb|EGG75868.1| 30S ribosomal protein S4 [Gluconacetobacter sp. SXCC-1]
          Length = 205

 Score =  232 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K 
Sbjct: 1   MSKRLESKYKINRRLGVNLWGRAKSPVNKREYGPGQHGQRRKQKPSDFSVQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I EK+FR  + EA R +GDTS NLI  LE RLD +VYR KF  T FAARQF++H H
Sbjct: 61  YYGNIGEKQFRKYYDEAVRRKGDTSENLIDLLERRLDAVVYRLKFAITPFAARQFISHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY  ++GDVIEV++KSKQLA VL+A+Q  ERDVPEY+ V+H  M  +F+
Sbjct: 121 ITVNGRKVNIPSYLVRDGDVIEVREKSKQLAIVLDAAQSGERDVPEYLEVDHRQMKGSFL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLV+EFYSR
Sbjct: 181 RSP-KLSDVPYPVQMEPNLVIEFYSR 205


>gi|240850639|ref|YP_002972039.1| 30S ribosomal protein S4 [Bartonella grahamii as4aup]
 gi|240267762|gb|ACS51350.1| 30S ribosomal protein S4 [Bartonella grahamii as4aup]
          Length = 205

 Score =  232 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 147/206 (71%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+F   ++EA R RGDT  NLI  LESRLD +VYRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFHKTYEEAARRRGDTGENLIGLLESRLDAVVYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLE+ QLAERDVP+YI  +H  M ATF 
Sbjct: 121 VSVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPDYIEADHKQMKATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205


>gi|325293260|ref|YP_004279124.1| 30S ribosomal protein S4 [Agrobacterium sp. H13-3]
 gi|325061113|gb|ADY64804.1| 30S ribosomal protein S4 [Agrobacterium sp. H13-3]
          Length = 205

 Score =  232 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 153/206 (74%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG++ EK+FR+ + EA+R +GDTS NLI  LESRLD IVYRAKFVPT+FA+RQF+NH H
Sbjct: 61  YYGELREKQFRATYDEANRRKGDTSENLIGLLESRLDAIVYRAKFVPTVFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV+QKSKQL +VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VTVNGVRVNIGSYRCKPGDVIEVRQKSKQLVTVLEAVQLAERDVPDYIEVDHNKMVATYA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVPYPV+M+P+LVVEFYSR
Sbjct: 181 RIPA-LSDVPYPVVMEPHLVVEFYSR 205


>gi|90420933|ref|ZP_01228838.1| 30S ribosomal protein S4 [Aurantimonas manganoxydans SI85-9A1]
 gi|90334908|gb|EAS48680.1| 30S ribosomal protein S4 [Aurantimonas manganoxydans SI85-9A1]
          Length = 205

 Score =  232 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 153/206 (74%), Positives = 172/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRASAKYKIDRRMGENIWGRPKSPVNRRQYGPGQHGQRRKGKVSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+SEK+FR I++EA R +GDTS NLI  LESRLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  YYGDVSEKQFRKIYEEAARRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG   NI SY CK GDVIEV+QKSKQL  +LE+ QLAERDVPEYI V+H  MVAT+ 
Sbjct: 121 VNVNGVRTNIQSYVCKPGDVIEVRQKSKQLTIILESVQLAERDVPEYIEVDHQKMVATYQ 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVPYPV M+PNLVVEFYSR
Sbjct: 181 RVPG-LHDVPYPVQMEPNLVVEFYSR 205


>gi|85704146|ref|ZP_01035249.1| 30S ribosomal protein S4 [Roseovarius sp. 217]
 gi|85671466|gb|EAQ26324.1| 30S ribosomal protein S4 [Roseovarius sp. 217]
          Length = 206

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 146/204 (71%), Positives = 167/204 (81%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKVSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT   LI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFAEAERIKGDTGETLIGLLERRLDAVVYRAKFVATMFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNI SYR KEGDVIEV+ +SKQ+A +LEA QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VTVNGNRVNIPSYRVKEGDVIEVRDRSKQIAVLLEAVQLAERDVPDYIDADHSKMKATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPVIM+PNLV+EFY
Sbjct: 181 RQPG-LSDVPYPVIMEPNLVIEFY 203


>gi|163868316|ref|YP_001609525.1| 30S ribosomal protein S4 [Bartonella tribocorum CIP 105476]
 gi|189045364|sp|A9IU99|RS4_BART1 RecName: Full=30S ribosomal protein S4
 gi|161017972|emb|CAK01530.1| 30S ribosomal protein S4 [Bartonella tribocorum CIP 105476]
          Length = 205

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 147/206 (71%), Positives = 168/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+F   + EA R RGDT  NLI  LESRLD +VYRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFHKTYVEAARRRGDTGENLIGLLESRLDAVVYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLE+ QLAERDVP+YI  +H  M ATF 
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPDYIEADHKQMKATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205


>gi|163732311|ref|ZP_02139757.1| 30S ribosomal protein S4 [Roseobacter litoralis Och 149]
 gi|161394609|gb|EDQ18932.1| 30S ribosomal protein S4 [Roseobacter litoralis Och 149]
          Length = 206

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 144/206 (69%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKISDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH+H
Sbjct: 61  YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVSTVFAARQFVNHKH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQ+A+++EA+QLAERDVP+YI  +H  M A FV
Sbjct: 121 VRVNGQIVNIPSYRVKEGDVIEVRDRSKQMAALIEATQLAERDVPDYIEADHSKMHAKFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+ L DVPYPV+M+PNLVVEFY++
Sbjct: 181 RTPA-LGDVPYPVMMEPNLVVEFYAK 205


>gi|114704639|ref|ZP_01437547.1| 30S ribosomal protein S4 [Fulvimarina pelagi HTCC2506]
 gi|114539424|gb|EAU42544.1| 30S ribosomal protein S4 [Fulvimarina pelagi HTCC2506]
          Length = 205

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 149/206 (72%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRRQYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FR +++EA R +GDTS NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDVREKQFRKVYEEAARRKGDTSENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG   N+ SYRCK GDVIEV++KSKQL SVLE+  LAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGVRTNVQSYRCKPGDVIEVREKSKQLTSVLESVGLAERDVPDYIEVDHNKMVATYQ 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYPV M+PNLVVEFYSR
Sbjct: 181 RVPA-LHDVPYPVQMEPNLVVEFYSR 205


>gi|149202433|ref|ZP_01879406.1| 30S ribosomal protein S4 [Roseovarius sp. TM1035]
 gi|149144531|gb|EDM32562.1| 30S ribosomal protein S4 [Roseovarius sp. TM1035]
          Length = 206

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 144/204 (70%), Positives = 169/204 (82%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK+K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNKREYGPGQHGQRRKAKISDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAERLKGDTGENLIGLLERRLDAVVYRAKFVVTMFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQ+  +LEA QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VTVNGQRVNIPSYRVKEGDVIEVRDRSKQMTVLLEAVQLAERDVPDYIEADHSKMKATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+EFY
Sbjct: 181 RQPG-LSDVPYPVMMEPNLVIEFY 203


>gi|315500061|ref|YP_004088864.1| ribosomal protein s4 [Asticcacaulis excentricus CB 48]
 gi|315418073|gb|ADU14713.1| ribosomal protein S4 [Asticcacaulis excentricus CB 48]
          Length = 205

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 141/205 (68%), Positives = 172/205 (83%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DR +GENLWGRPKSPVN RSYGPG HGQRRKSK S FGLQLRAKQK+K 
Sbjct: 1   MSKRHSAKYKLDRAMGENLWGRPKSPVNKRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+F  I++EADR +G+TS NLI+ LESRLD IVYR KFVPT++AARQFVNH H
Sbjct: 61  YYGNITEKQFSKIYEEADRRKGNTSENLIALLESRLDAIVYRCKFVPTVWAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR K GDVIEV+++S+ +A VLEA Q  ERDVP+YI ++   M AT++
Sbjct: 121 VLVNGKKVNIASYRVKVGDVIEVRERSRNMALVLEALQSPERDVPDYIELDAKAMKATYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R+P  L +VPYPV M+PNL+VE+YS
Sbjct: 181 RLPE-LSEVPYPVKMEPNLIVEYYS 204


>gi|197104460|ref|YP_002129837.1| ribosomal protein S4 [Phenylobacterium zucineum HLK1]
 gi|226699100|sp|B4RHE8|RS4_PHEZH RecName: Full=30S ribosomal protein S4
 gi|196477880|gb|ACG77408.1| ribosomal protein S4 [Phenylobacterium zucineum HLK1]
          Length = 205

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DRR+GEN+WGRPKSPVN+R+YGPG HGQRRKSK S FGLQLRAKQK+K 
Sbjct: 1   MSKRHSAKYKLDRRMGENIWGRPKSPVNSRAYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+F  I+ EA R +G+TS NLI+ LESRLD +VYRAKFVPT FAARQFVNH H
Sbjct: 61  YYGNITEKQFVRIYTEAARRKGNTSENLIALLESRLDAVVYRAKFVPTPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYR K GDV+ V+++S+ +A VLEA Q +ERD P+YI+++   M ATFV
Sbjct: 121 VLVNGKRVNIPSYRVKPGDVVSVRERSRNMALVLEALQSSERDTPDYITLDAKGMSATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P   + VPYPV M+PNLVVEFY
Sbjct: 181 RAPELAE-VPYPVKMEPNLVVEFY 203


>gi|49474224|ref|YP_032266.1| 30S ribosomal protein S4 [Bartonella quintana str. Toulouse]
 gi|61215536|sp|Q6FZU4|RS4_BARQU RecName: Full=30S ribosomal protein S4
 gi|49239728|emb|CAF26110.1| 30s ribosomal protein s4 [Bartonella quintana str. Toulouse]
          Length = 205

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 149/206 (72%), Positives = 172/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R RGDT  NLI  LESRLD ++YRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAVIYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLE+ QLAERDVPEYI  +H+ M ATFV
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESVQLAERDVPEYIEADHNQMKATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205


>gi|260576499|ref|ZP_05844489.1| ribosomal protein S4 [Rhodobacter sp. SW2]
 gi|259021382|gb|EEW24688.1| ribosomal protein S4 [Rhodobacter sp. SW2]
          Length = 206

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 139/206 (67%), Positives = 164/206 (79%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+KHKIDRR+GEN+WGR KSP+N R YGPG HGQRRK+K S FG QLRAKQK+K 
Sbjct: 1   MTKRTSAKHKIDRRMGENIWGRAKSPLNKREYGPGQHGQRRKNKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF EA+R +GDT   L+  LE RLD + YRAK V TIFAARQFVNH H
Sbjct: 61  YYGDLTEKQFRKIFAEAERVKGDTGEMLVGLLERRLDAVCYRAKLVATIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNI SYR KEGD+IEV+QKSKQLA +LEASQL ERD+P+Y+ V+   +   FV
Sbjct: 121 VTVNGVRVNIASYRVKEGDIIEVRQKSKQLALILEASQLTERDIPDYLEVDQSKLTVKFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVEFY++
Sbjct: 181 RTPG-LGDVPYPVQMEPNLVVEFYAK 205


>gi|15889161|ref|NP_354842.1| 30S ribosomal protein S4 [Agrobacterium tumefaciens str. C58]
 gi|26399422|sp|Q8UEA0|RS4_AGRT5 RecName: Full=30S ribosomal protein S4
 gi|15156975|gb|AAK87627.1| 30S ribosomal protein S4 [Agrobacterium tumefaciens str. C58]
          Length = 205

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 155/206 (75%), Positives = 179/206 (86%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG++ EK+FR+ F EA+R +GDTS NLIS LESRLD IVYRAKFVPT+FA+RQF+NH H
Sbjct: 61  YYGELREKQFRATFDEANRRKGDTSENLISLLESRLDAIVYRAKFVPTVFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNIGSYRCK GDVIEV+QKSKQL +VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVRQKSKQLVTVLEAVQLAERDVPDYIEVDHNKMVATYA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+PS L DVPYPV+M+P+LVVEFYSR
Sbjct: 181 RVPS-LSDVPYPVVMEPHLVVEFYSR 205


>gi|83311227|ref|YP_421491.1| 30S ribosomal protein S4 [Magnetospirillum magneticum AMB-1]
 gi|123542029|sp|Q2W5E3|RS4_MAGMM RecName: Full=30S ribosomal protein S4
 gi|82946068|dbj|BAE50932.1| Ribosomal protein S4 and related protein [Magnetospirillum
           magneticum AMB-1]
          Length = 205

 Score =  230 bits (588), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 136/207 (65%), Positives = 157/207 (75%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT-RSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           MSKR  +K+KI+RR+G NLWGR KSP+N  +   PG HGQRRK KPS FG QL AKQK+K
Sbjct: 1   MSKRIEAKYKINRRLGANLWGRSKSPLNRGKENPPGQHGQRRK-KPSDFGTQLMAKQKLK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG+ISEK+FR ++ EA R RGDTS NLI  LE RLD +VYR KF PT FAARQ VNH 
Sbjct: 60  GYYGNISEKQFRRLYDEAVRRRGDTSENLIGLLECRLDAVVYRLKFAPTPFAARQLVNHC 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LVNG+ VNI SYR  EGDVI VK KSK +A +LEA+Q  ERDVP+Y+ V+H  M   F
Sbjct: 120 HILVNGKRVNIPSYRVNEGDVISVKTKSKDMALILEAAQSGERDVPDYMEVDHKEMKGKF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VRIP  L DVPY V M+PNLVVEFYSR
Sbjct: 180 VRIP-KLGDVPYAVQMEPNLVVEFYSR 205


>gi|110633623|ref|YP_673831.1| 30S ribosomal protein S4 [Mesorhizobium sp. BNC1]
 gi|123353737|sp|Q11IV9|RS4_MESSB RecName: Full=30S ribosomal protein S4
 gi|110284607|gb|ABG62666.1| SSU ribosomal protein S4P [Chelativorans sp. BNC1]
          Length = 205

 Score =  230 bits (588), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 146/206 (70%), Positives = 173/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRQSAKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGQQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+SEK+FR I+ EA+R +G+T+ NLI  LESRLD IV+RAKFVPT FAARQFVNH H
Sbjct: 61  YYGDLSEKQFRRIYDEANRRKGETTENLIGLLESRLDAIVFRAKFVPTPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYRCK GDVIEV++KSKQL  VLE+  LAERDVP+YI V+H+ M A +V
Sbjct: 121 VKVNGRRVNIPSYRCKPGDVIEVREKSKQLTVVLESVALAERDVPDYIEVDHNKMTAKYV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPY V M+PNLV+E+YSR
Sbjct: 181 RMPA-LADVPYAVHMEPNLVIEYYSR 205


>gi|319898918|ref|YP_004159011.1| 30S ribosomal protein S4 [Bartonella clarridgeiae 73]
 gi|319402882|emb|CBI76433.1| 30S ribosomal protein S4 [Bartonella clarridgeiae 73]
          Length = 205

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 154/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRESTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R RGDTS NLI  LESRLD IVYRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRRGDTSENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLE+ QLAERDVPEYI V+H+ M ATF+
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESIQLAERDVPEYIDVDHNKMKATFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FTDVPYAVHMEPNLVVEFYSR 205


>gi|114569567|ref|YP_756247.1| 30S ribosomal protein S4 [Maricaulis maris MCS10]
 gi|122316382|sp|Q0AQX8|RS4_MARMM RecName: Full=30S ribosomal protein S4
 gi|114340029|gb|ABI65309.1| SSU ribosomal protein S4P [Maricaulis maris MCS10]
          Length = 205

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 138/205 (67%), Positives = 164/205 (80%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S K+KIDRR+GENLWGRPKSPVN+RSYGPG HGQRRK+K S FGLQL AKQK+K 
Sbjct: 1   MSKRHSQKYKIDRRMGENLWGRPKSPVNSRSYGPGQHGQRRKTKMSDFGLQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+FR  + EA R +G+T+  LI  LESRLD IVYR KFVPT+FA+RQFVNH H
Sbjct: 61  YYGNITEKQFRRTYDEASRRKGNTAELLIGLLESRLDAIVYRCKFVPTVFASRQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNI SYRCK GDVIEV+++S+ +A VLEA    ERD+PEYI ++   M ATFV
Sbjct: 121 VKVNGIKVNIPSYRCKPGDVIEVRERSRSMALVLEALDSPERDLPEYIDLDAKAMKATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R+P    +VPY V M+PNLV+EFYS
Sbjct: 181 RMPE-FSEVPYAVQMEPNLVIEFYS 204


>gi|159045488|ref|YP_001534282.1| 30S ribosomal protein S4 [Dinoroseobacter shibae DFL 12]
 gi|189045378|sp|A8LK98|RS4_DINSH RecName: Full=30S ribosomal protein S4
 gi|157913248|gb|ABV94681.1| 30S ribosomal protein S4 [Dinoroseobacter shibae DFL 12]
          Length = 206

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 144/204 (70%), Positives = 173/204 (84%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKQKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA+R +GDT  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG  VNI SYR KEGDVIEV++KS+Q+A++LEA+QL ERDVP+Y+  +H+ M ATFV
Sbjct: 121 VLVNGERVNIPSYRVKEGDVIEVREKSRQMAALLEATQLPERDVPDYVDADHNKMKATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+E+Y
Sbjct: 181 RTPG-LADVPYPVMMEPNLVIEYY 203


>gi|319405659|emb|CBI79282.1| 30S ribosomal protein S4 [Bartonella sp. AR 15-3]
          Length = 205

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 153/206 (74%), Positives = 175/206 (84%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRE++KHKIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRETTKHKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R RGDT  NLI  LESRLD IVYRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLEA QLAERDVPEYI+V+H+ M+ATF+
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLEAVQLAERDVPEYINVDHNKMIATFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FADVPYAVHMEPNLVVEFYSR 205


>gi|258542135|ref|YP_003187568.1| 30S ribosomal protein S4 [Acetobacter pasteurianus IFO 3283-01]
 gi|256633213|dbj|BAH99188.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-01]
 gi|256636272|dbj|BAI02241.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-03]
 gi|256639325|dbj|BAI05287.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-07]
 gi|256642381|dbj|BAI08336.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-22]
 gi|256645436|dbj|BAI11384.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-26]
 gi|256648489|dbj|BAI14430.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-32]
 gi|256651542|dbj|BAI17476.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654533|dbj|BAI20460.1| SSU ribosomal protein S4P [Acetobacter pasteurianus IFO 3283-12]
          Length = 205

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 134/206 (65%), Positives = 165/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K 
Sbjct: 1   MSKRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKGKPSDFSVQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+FR  ++EA R +GDTS NLI+ LE RLD +VYR KF  T FA+RQF++H H
Sbjct: 61  YYGNITEKQFRRYYQEAVRRKGDTSENLINLLERRLDAVVYRMKFAITPFASRQFISHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ +NI SY  K+GDVIEV++KSKQLA VL+A+Q +ERDVPEY+ V+H  M  T++
Sbjct: 121 ILVNGKKMNIPSYLVKDGDVIEVREKSKQLAIVLDAAQSSERDVPEYMEVDHRQMKGTYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVE+YSR
Sbjct: 181 RGPQ-LSDVPYPVQMEPNLVVEYYSR 205


>gi|39934659|ref|NP_946935.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris CGA009]
 gi|192290175|ref|YP_001990780.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris TIE-1]
 gi|61215592|sp|Q6N9G0|RS4_RHOPA RecName: Full=30S ribosomal protein S4; AltName: Full=RRP-S4
 gi|226699113|sp|B3Q7H1|RS4_RHOPT RecName: Full=30S ribosomal protein S4
 gi|39648509|emb|CAE27030.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris CGA009]
 gi|192283924|gb|ACF00305.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 205

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 137/206 (66%), Positives = 168/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRAEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +I+ EA R +GD+  NLI  LE RLD +VYRAKFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDAVVYRAKFVSTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY+ + GDVIEVK+ SKQLA VLEASQLAERDVP+YI V+H+ M A F 
Sbjct: 121 IKVNGKRVNIPSYKVRVGDVIEVKEASKQLAFVLEASQLAERDVPDYIEVDHNKMTAKFA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205


>gi|323137934|ref|ZP_08073009.1| ribosomal protein S4 [Methylocystis sp. ATCC 49242]
 gi|322396937|gb|EFX99463.1| ribosomal protein S4 [Methylocystis sp. ATCC 49242]
          Length = 205

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 133/206 (64%), Positives = 160/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+K+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S +G QL+AKQK+K 
Sbjct: 1   MTKRAEAKYKLDRRLGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGTQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  + EA R +GD+  NLI  LE RLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGNISEKQFRKYYAEAIRMKGDSGDNLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY  K GDVIEVK+ SKQ  +VLE+  LAERD PEY  V+H  M A   
Sbjct: 121 IRVNGRRVNIPSYLVKVGDVIEVKEASKQAVTVLESVALAERDTPEYYDVDHSKMTAKLT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P + + VPYPV M+PNLV+EFYSR
Sbjct: 181 RVPHATE-VPYPVQMEPNLVIEFYSR 205


>gi|16126750|ref|NP_421314.1| 30S ribosomal protein S4 [Caulobacter crescentus CB15]
 gi|221235532|ref|YP_002517969.1| 30S ribosomal protein S4 [Caulobacter crescentus NA1000]
 gi|26399478|sp|Q9A5D9|RS4_CAUCR RecName: Full=30S ribosomal protein S4
 gi|254764577|sp|B8H053|RS4_CAUCN RecName: Full=30S ribosomal protein S4
 gi|13424068|gb|AAK24482.1| ribosomal protein S4 [Caulobacter crescentus CB15]
 gi|220964705|gb|ACL96061.1| SSU ribosomal protein S4P [Caulobacter crescentus NA1000]
          Length = 205

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 143/204 (70%), Positives = 170/204 (83%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+KIDRR+GENLWGRPKSPVN+RSYGPG HGQRRKSK S FGLQLRAKQK+K 
Sbjct: 1   MSKRHSAKYKIDRRMGENLWGRPKSPVNSRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+++EK+F   ++EA R +G+TS NLI+ LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGNLTEKQFSRTYEEAARRKGNTSENLIALLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYRCK GDVI+V++KS+ +A VLEA    ERD  EY+SV+  ++ ATFV
Sbjct: 121 VTVNGKRVNIPSYRCKAGDVIQVREKSRNMALVLEAVASNERDFAEYVSVDAKSLSATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L +VPYPV M+PNLVVEFY
Sbjct: 181 RAPE-LSEVPYPVKMEPNLVVEFY 203


>gi|114327192|ref|YP_744349.1| 30S ribosomal protein S4 [Granulibacter bethesdensis CGDNIH1]
 gi|114315366|gb|ABI61426.1| SSU ribosomal protein S4P [Granulibacter bethesdensis CGDNIH1]
          Length = 231

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  SK KI+RR+G NLWGR KSP+N R Y PG HGQRRK KPS FG+QL AKQK+K 
Sbjct: 27  MTKRAESKFKINRRLGVNLWGRAKSPLNKRDYAPGQHGQRRKGKPSDFGIQLMAKQKLKG 86

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  ++EA R +GDTS NLI  LE RLD ++YR KF  T FAARQFVNH H
Sbjct: 87  YYGNISEKQFRKYYEEAVRRKGDTSENLIELLERRLDAVIYRMKFALTPFAARQFVNHGH 146

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SY  K GDV+EV++KSKQLA VL+A+Q  ERDVPEY+ V+H  M  T+ 
Sbjct: 147 VLVNGKRVNIPSYLVKVGDVVEVREKSKQLAMVLDATQSGERDVPEYLHVDHRLMKGTYA 206

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLV+E+YSR
Sbjct: 207 RYP-KLSDVPYPVQMEPNLVIEYYSR 231


>gi|296115002|ref|ZP_06833646.1| 30S ribosomal protein S4 [Gluconacetobacter hansenii ATCC 23769]
 gi|295978464|gb|EFG85198.1| 30S ribosomal protein S4 [Gluconacetobacter hansenii ATCC 23769]
          Length = 205

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 134/206 (65%), Positives = 159/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K 
Sbjct: 1   MSKRLESKYKINRRLGVNLWGRAKSPVNKREYGPGQHGQRRKQKPSDFSIQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I EK+FR  + EA R +GDTS NLI  LE RLD +VYR KF  T FAARQF++H H
Sbjct: 61  YYGNIGEKQFRKYYDEAVRRKGDTSENLIDLLERRLDAVVYRMKFAITPFAARQFISHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY  ++GDVIEV++KSKQLA VL+A+Q  ER+VPEY+ V+H  M  TF 
Sbjct: 121 ITVNGRKVNIPSYLVRDGDVIEVREKSKQLAIVLDAAQSGEREVPEYMEVDHRQMKGTFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R  + L DVPYPV M+PNLV+EFYSR
Sbjct: 181 RT-AKLSDVPYPVQMEPNLVIEFYSR 205


>gi|83949926|ref|ZP_00958659.1| 30S ribosomal protein S4 [Roseovarius nubinhibens ISM]
 gi|83837825|gb|EAP77121.1| 30S ribosomal protein S4 [Roseovarius nubinhibens ISM]
          Length = 206

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 143/204 (70%), Positives = 169/204 (82%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+K+KIDRR+GEN+WGRPKSPVN R   PG HG RRK+K S FGLQLRAKQK+K 
Sbjct: 1   MTKRTSAKYKIDRRMGENIWGRPKSPVNRRENAPGQHGARRKAKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR IF+EA+R +GDT  NLI  LE RLD +VYRAKFV T+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIFREAERVKGDTGENLIGLLERRLDAVVYRAKFVATMFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV+ +SKQ+A +LEA+QLAERDVP+YI  +H  M ATFV
Sbjct: 121 VKVNGQRVNIPSYRVKEGDVIEVRDRSKQIAVLLEATQLAERDVPDYIDADHSKMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L DVPYPV+M+PNLV+EFY
Sbjct: 181 RTPG-LSDVPYPVMMEPNLVIEFY 203


>gi|319408557|emb|CBI82210.1| 30S ribosomal protein S4 [Bartonella schoenbuchensis R1]
          Length = 205

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 153/206 (74%), Positives = 172/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRESTKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR I++EA R RGDTS NLI  LESRLD IVYRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKIYEEAVRRRGDTSENLIGLLESRLDAIVYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIEV++KSKQL  VLE+ QLAERDVPEYI  +H  M ATF 
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEVREKSKQLVLVLESIQLAERDVPEYIEADHSKMKATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FSDVPYAVHMEPNLVVEFYSR 205


>gi|114771201|ref|ZP_01448621.1| 30S ribosomal protein S4 [alpha proteobacterium HTCC2255]
 gi|114548126|gb|EAU51013.1| 30S ribosomal protein S4 [alpha proteobacterium HTCC2255]
          Length = 206

 Score =  229 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 139/206 (67%), Positives = 167/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++KHK+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRTAAKHKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKQKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR I+ EA R  GDT  NL+  LE RLD +VYR+KFVPT+FAARQFVNH H
Sbjct: 61  YYGDLTEKQFRRIYGEAVRVNGDTGENLVGLLERRLDAVVYRSKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR KEGDVIEV++KS+Q+A V+EA   AERD  EYI+V+   M A FV
Sbjct: 121 VTVNGKKVNIPSYRVKEGDVIEVREKSRQMALVIEALASAERDFAEYINVDASKMKAEFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPVIM+PNLVVE+Y++
Sbjct: 181 RTPV-LADVPYPVIMEPNLVVEYYAK 205


>gi|49475604|ref|YP_033645.1| 30S ribosomal protein S4 [Bartonella henselae str. Houston-1]
 gi|61215542|sp|Q6G5E2|RS4_BARHE RecName: Full=30S ribosomal protein S4
 gi|49238411|emb|CAF27638.1| 30S ribosomal protein s4 [Bartonella henselae str. Houston-1]
          Length = 205

 Score =  229 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 146/206 (70%), Positives = 170/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRE++K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRETTKYKIDRRMGENIWGRPKSPVNRRDYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R RGDT  NLI  LESRLD ++YRAKFVPTIFA+RQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRRGDTGENLIGLLESRLDAVIYRAKFVPTIFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR  NI SYRCK GDVIE+++KSKQL  VLE+ QL ERDVPEYI  +H+ M ATF 
Sbjct: 121 VNVNGRRTNIQSYRCKPGDVIEIREKSKQLVLVLESVQLVERDVPEYIEADHNQMKATFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY V M+PNLVVEFYSR
Sbjct: 181 RIPA-FADVPYAVQMEPNLVVEFYSR 205


>gi|295688620|ref|YP_003592313.1| 30S ribosomal protein S4 [Caulobacter segnis ATCC 21756]
 gi|295430523|gb|ADG09695.1| ribosomal protein S4 [Caulobacter segnis ATCC 21756]
          Length = 205

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 144/204 (70%), Positives = 167/204 (81%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+KIDRR+GENLWGRPKSPVN+RSYGPG HGQRRKSK S FGLQLRAKQK+K 
Sbjct: 1   MSKRHSAKYKIDRRMGENLWGRPKSPVNSRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+++EK+F   ++EA R +G+TS NLI  LESRLD IVYRAKFVPT FAARQFVNH H
Sbjct: 61  YYGNLTEKQFSRTYEEAARRKGNTSENLIGLLESRLDAIVYRAKFVPTPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SYRCK GDVI V++KS+ +A VLE+    ERD  EY+SV   +M ATFV
Sbjct: 121 VLVNGKRVNIPSYRCKPGDVISVREKSRNMALVLESLASNERDFCEYVSVEAKSMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R P  L +VPYPV M+PNLVVEFY
Sbjct: 181 RAPE-LSEVPYPVKMEPNLVVEFY 203


>gi|316935241|ref|YP_004110223.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris DX-1]
 gi|315602955|gb|ADU45490.1| ribosomal protein S4 [Rhodopseudomonas palustris DX-1]
          Length = 205

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 136/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRAEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +I+ EA R +GD+  NLI  LE RLD +VYRAKFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDAVVYRAKFVATMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY+ + GDVIEVK+ SKQLA VLEASQL ERDVP+YI V+H+ M A F 
Sbjct: 121 IRVNGKRVNIPSYKLRVGDVIEVKEASKQLAFVLEASQLGERDVPDYIEVDHNKMTAKFA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205


>gi|167647476|ref|YP_001685139.1| 30S ribosomal protein S4 [Caulobacter sp. K31]
 gi|189045368|sp|B0T660|RS4_CAUSK RecName: Full=30S ribosomal protein S4
 gi|167349906|gb|ABZ72641.1| RNA-binding S4 domain protein [Caulobacter sp. K31]
          Length = 205

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 138/204 (67%), Positives = 167/204 (81%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+KIDRR+GENLWGRPKSPVN RSYGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MSKRHSAKYKIDRRMGENLWGRPKSPVNQRSYGPGQHGQRRKQKVSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+++EK+F   ++EA R +G+T+ NL+  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGNLTEKQFSRTYEEAARRKGNTAENLVGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYRCK GDVI V++KS+ +A VLEA   +ERD  EYI+V+   + A+F+
Sbjct: 121 VTVNGKRVNIASYRCKIGDVIAVREKSRNMALVLEAVASSERDFCEYITVDAKGLEASFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R+P  L +VPYPV M+PNLVVEFY
Sbjct: 181 RVPE-LSEVPYPVKMEPNLVVEFY 203


>gi|254292960|ref|YP_003058983.1| 30S ribosomal protein S4 [Hirschia baltica ATCC 49814]
 gi|254041491|gb|ACT58286.1| ribosomal protein S4 [Hirschia baltica ATCC 49814]
          Length = 205

 Score =  228 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 128/205 (62%), Positives = 156/205 (76%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+R S+K+K+DRR+GEN+WGR KSP+N R   PG HG  RK K S FGLQL AKQK+K 
Sbjct: 1   MSRRSSAKYKLDRRVGENVWGRAKSPINKRQSRPGQHGAARKGKLSDFGLQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGD++EK+FR  + EA R +G+T+ NLI  LESRLD +VYRAKFVPTIFAARQFVNH H
Sbjct: 61  HYGDVTEKQFRRTYDEAARRKGNTAENLIGLLESRLDALVYRAKFVPTIFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG   N+ SYR + GDV++VK KS+ +A VLEA   AERD+P+YI V    M ATFV
Sbjct: 121 VTVNGVKANVPSYRLRPGDVVQVKDKSRSMALVLEALGSAERDIPDYIEVEPKAMTATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R+P  L DVPY   M+PNLVVE+YS
Sbjct: 181 RLPE-LADVPYACRMEPNLVVEYYS 204


>gi|162147980|ref|YP_001602441.1| 30S ribosomal protein S4 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542598|ref|YP_002274827.1| 30S ribosomal protein S4 [Gluconacetobacter diazotrophicus PAl 5]
 gi|189045383|sp|A9HL98|RS4_GLUDA RecName: Full=30S ribosomal protein S4
 gi|161786557|emb|CAP56139.1| 30S ribosomal protein S4 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530275|gb|ACI50212.1| RNA-binding S4 domain protein [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 205

 Score =  228 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 158/206 (76%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  SK+KI+RR+G NLWGR KSPVN R YGPG HGQRRK KPS F +QL AKQK+K 
Sbjct: 1   MSKRLESKYKINRRLGVNLWGRAKSPVNKREYGPGQHGQRRKQKPSDFSVQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  + EA R +GDTS NLI  LE RLD +VYR KF  T FAARQFV+H H
Sbjct: 61  YYGNISEKQFRKYYDEAVRRKGDTSENLIDLLERRLDAVVYRLKFAMTPFAARQFVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY  ++ DVIEV++KSK LA VL+A+Q  ERDVPEY+ V+H  M   F+
Sbjct: 121 ITVNGRKVNIPSYIVRDEDVIEVREKSKHLAIVLDAAQSGERDVPEYMEVDHRQMKGRFL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLV+EFYSR
Sbjct: 181 RAP-KLSDVPYPVQMEPNLVIEFYSR 205


>gi|188584461|ref|YP_001927906.1| 30S ribosomal protein S4 [Methylobacterium populi BJ001]
 gi|226699088|sp|B1ZAP8|RS4_METPB RecName: Full=30S ribosomal protein S4
 gi|179347959|gb|ACB83371.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001]
          Length = 205

 Score =  228 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 139/206 (67%), Positives = 162/206 (78%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRVQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+FR  + EA R RGD+  NLI  LE RLD +VYR+KFV T FAARQFVNH H
Sbjct: 61  YYGNITEKQFRRYYAEAIRLRGDSGENLIGLLERRLDAVVYRSKFVATPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY+ K GDVIEVK+ S+QL  V+ ASQLAERDVP+YI V+H  M A   
Sbjct: 121 IKVNGRRVNIPSYQVKAGDVIEVKEASRQLEIVVVASQLAERDVPDYIEVDHQKMSARVT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L +VPYPV M+PNLV+EFYSR
Sbjct: 181 RIPG-LSEVPYPVQMEPNLVIEFYSR 205


>gi|152060950|sp|Q0BUS6|RS4_GRABC RecName: Full=30S ribosomal protein S4
          Length = 205

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  SK KI+RR+G NLWGR KSP+N R Y PG HGQRRK KPS FG+QL AKQK+K 
Sbjct: 1   MTKRAESKFKINRRLGVNLWGRAKSPLNKRDYAPGQHGQRRKGKPSDFGIQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  ++EA R +GDTS NLI  LE RLD ++YR KF  T FAARQFVNH H
Sbjct: 61  YYGNISEKQFRKYYEEAVRRKGDTSENLIELLERRLDAVIYRMKFALTPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ VNI SY  K GDV+EV++KSKQLA VL+A+Q  ERDVPEY+ V+H  M  T+ 
Sbjct: 121 VLVNGKRVNIPSYLVKVGDVVEVREKSKQLAMVLDATQSGERDVPEYLHVDHRLMKGTYA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLV+E+YSR
Sbjct: 181 RYP-KLSDVPYPVQMEPNLVIEYYSR 205


>gi|83858775|ref|ZP_00952297.1| 30S ribosomal protein S4 [Oceanicaulis alexandrii HTCC2633]
 gi|83853598|gb|EAP91450.1| 30S ribosomal protein S4 [Oceanicaulis alexandrii HTCC2633]
          Length = 205

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 137/205 (66%), Positives = 162/205 (79%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S K+KIDRR+GEN+WGR KSPVN RSYGPG HGQRR  K S FGLQLRAKQK+K 
Sbjct: 1   MSKRHSQKYKIDRRMGENIWGRAKSPVNKRSYGPGQHGQRRAGKLSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+F+ I+ EA R +G+T+ NLI  LESRLD IVYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGNITEKQFKRIYTEAQRLKGNTAENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY  K GDV+EV++KS+ +A VLEA    ERDVP+YI ++   M AT+ 
Sbjct: 121 VRVNGKRVNIASYMVKPGDVVEVREKSRSMALVLEALGSPERDVPDYIDLDPKAMKATYT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R P    +VPYPV M+PNLVVEFYS
Sbjct: 181 RKPE-FNEVPYPVKMEPNLVVEFYS 204


>gi|256113362|ref|ZP_05454220.1| 30S ribosomal protein S4 [Brucella melitensis bv. 3 str. Ether]
 gi|265994768|ref|ZP_06107325.1| SSU ribosomal protein S4P [Brucella melitensis bv. 3 str. Ether]
 gi|262765881|gb|EEZ11670.1| SSU ribosomal protein S4P [Brucella melitensis bv. 3 str. Ether]
          Length = 201

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 148/202 (73%), Positives = 170/202 (84%), Gaps = 1/202 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRES+K+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YGDISEK+FR  ++EA R +GDT  NLI  LESRLD +VYRAKFVPTIFAARQF+NH H
Sbjct: 61  FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+EV++KSKQLA VLEA QLAERDVP+YI V+H+ MVAT+ 
Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYK 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVE 202
           R+P  L DVPY V M+PNLVVE
Sbjct: 181 RVPG-LSDVPYAVQMEPNLVVE 201


>gi|154253024|ref|YP_001413848.1| 30S ribosomal protein S4 [Parvibaculum lavamentivorans DS-1]
 gi|171769617|sp|A7HWA8|RS4_PARL1 RecName: Full=30S ribosomal protein S4
 gi|154156974|gb|ABS64191.1| RNA-binding S4 domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 206

 Score =  227 bits (580), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 146/206 (70%), Positives = 171/206 (83%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR+ SK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MTKRQESKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDYGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG+ISEK+FR I+KEA+R RGDTS  LI  LE RLD +VYRAKFV T FAARQFV H H
Sbjct: 61  FYGNISEKQFRGIYKEANRLRGDTSEILIGLLERRLDAVVYRAKFVMTPFAARQFVGHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ VN+ SYR +EGDVIEV++KSKQLA VLEASQ AERD P+YI V+HD MVA FV
Sbjct: 121 ILVNGKRVNVPSYRVREGDVIEVREKSKQLAIVLEASQSAERDTPDYIEVDHDKMVAKFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+   DVPY   M+PNLV+EFYSR
Sbjct: 181 RIPA-FSDVPYAAHMEPNLVIEFYSR 205


>gi|91976243|ref|YP_568902.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris BisB5]
 gi|123735552|sp|Q13A88|RS4_RHOPS RecName: Full=30S ribosomal protein S4
 gi|91682699|gb|ABE39001.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris BisB5]
          Length = 205

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 136/206 (66%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +I+ EA R +GD+  NLI  LE RLDT+VYR+KFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDTVVYRSKFVSTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY+ + GDVIEVK+ SKQLA VLEA+QLAERDVP+YI V+H+ M A F 
Sbjct: 121 IKVNGKRVNISSYKVRVGDVIEVKEASKQLAIVLEANQLAERDVPDYIDVDHNKMTAKFG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPA-LSDVPFAVQMEPHLIVEFYSR 205


>gi|315122617|ref|YP_004063106.1| 30S ribosomal protein S4 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496019|gb|ADR52618.1| 30S ribosomal protein S4 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 206

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 180/206 (87%), Positives = 192/206 (93%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKRESSKHKIDRRI ENLWGRPKSPVN RSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK
Sbjct: 1   MSKRESSKHKIDRRISENLWGRPKSPVNVRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD+ EK+FRSIFKEADR +GDTS NLISFLESRLDTIVYRAKFVPT+FAARQFVNHRH
Sbjct: 61  YYGDVGEKQFRSIFKEADRCKGDTSQNLISFLESRLDTIVYRAKFVPTVFAARQFVNHRH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG SVNIGSYRCK GDVIEVK KSK+L SVL + QL ERDVPEYIS +H+NMVATFV
Sbjct: 121 VLVNGFSVNIGSYRCKAGDVIEVKSKSKKLTSVLGSVQLPERDVPEYISADHENMVATFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +IP+SL +VPYPVIM+PNLVVEFYSR
Sbjct: 181 KIPTSLSEVPYPVIMEPNLVVEFYSR 206


>gi|182678240|ref|YP_001832386.1| 30S ribosomal protein S4 [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226697805|sp|B2IJM5|RS4_BEII9 RecName: Full=30S ribosomal protein S4
 gi|182634123|gb|ACB94897.1| RNA-binding S4 domain protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 205

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGR KSPVN R YGPG HGQRRK K S FG QL+AKQK+K 
Sbjct: 1   MTKRAEAKYKIDRRMGQNIWGRSKSPVNRREYGPGQHGQRRKGKLSDFGTQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  + EA R +GD+  NLI  LE RLD +VYRAKFVPT+FA+RQF+NH H
Sbjct: 61  YYGNISEKQFRKYYAEAIRMKGDSGDNLIGLLERRLDAVVYRAKFVPTVFASRQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY+ + GDVIEVK+ S+QL  VLEASQLAERDVPEY  V+H  M A   
Sbjct: 121 IKVNGRRVNIASYQVRVGDVIEVKEASRQLTLVLEASQLAERDVPEYYDVDHGKMSAKVT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP    +VPYPVIM+PNLV+EFYSR
Sbjct: 181 RIPL-PNEVPYPVIMEPNLVIEFYSR 205


>gi|209884598|ref|YP_002288455.1| ribosomal protein S4 [Oligotropha carboxidovorans OM5]
 gi|226699096|sp|B6JDU6|RS4_OLICO RecName: Full=30S ribosomal protein S4
 gi|209872794|gb|ACI92590.1| ribosomal protein S4 [Oligotropha carboxidovorans OM5]
          Length = 205

 Score =  227 bits (579), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +++ EA R +GD+  NLI  LE RLD IVYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYANISERQFYAVYVEATRLKGDSGENLIGLLERRLDAIVYRAKFVPTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY+ K GDVIEVK  SKQLA VLEA+QLAERDVP+++ V+H    A F 
Sbjct: 121 IKVNGKRVNIPSYKVKVGDVIEVKDASKQLALVLEANQLAERDVPDFLDVDHGKQTAKFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIPS L +VP+PV M+P+L++EFYSR
Sbjct: 181 RIPS-LSEVPFPVQMEPHLIIEFYSR 205


>gi|163854133|ref|YP_001642176.1| 30S ribosomal protein S4 [Methylobacterium extorquens PA1]
 gi|218533078|ref|YP_002423894.1| 30S ribosomal protein S4 [Methylobacterium chloromethanicum CM4]
 gi|240141590|ref|YP_002966070.1| 30S ribosomal protein S4 [Methylobacterium extorquens AM1]
 gi|254564101|ref|YP_003071196.1| 30S ribosomal protein S4 [Methylobacterium extorquens DM4]
 gi|226699086|sp|A9W966|RS4_METEP RecName: Full=30S ribosomal protein S4
 gi|254764596|sp|B7KVN1|RS4_METC4 RecName: Full=30S ribosomal protein S4
 gi|163665738|gb|ABY33105.1| RNA-binding S4 domain protein [Methylobacterium extorquens PA1]
 gi|218525381|gb|ACK85966.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum
           CM4]
 gi|240011567|gb|ACS42793.1| 30S ribosomal protein S4 [Methylobacterium extorquens AM1]
 gi|254271379|emb|CAX27392.1| 30S ribosomal protein S4 [Methylobacterium extorquens DM4]
          Length = 205

 Score =  227 bits (579), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRVQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+FR  + EA R RGD+  NLI  LE RLD +VYR+KFV T FAARQFVNH H
Sbjct: 61  YYGNITEKQFRRYYAEAIRLRGDSGENLIGLLERRLDAVVYRSKFVATPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY+ K GDVIEVK+ S+QL  V+ ASQLAERDVP+YI V+H  M A   
Sbjct: 121 IKVNGRRVNIPSYQVKAGDVIEVKEASRQLEIVVVASQLAERDVPDYIEVDHHKMTARVT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP   + VPYPV M+PNLV+EFYSR
Sbjct: 181 RIPGLTE-VPYPVQMEPNLVIEFYSR 205


>gi|86750809|ref|YP_487305.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris HaA2]
 gi|123407656|sp|Q2ITR6|RS4_RHOP2 RecName: Full=30S ribosomal protein S4
 gi|86573837|gb|ABD08394.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris HaA2]
          Length = 205

 Score =  227 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F SI+ EA R +GD+  NLI  LE RLDT+VYRAKFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHSIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVSTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY+ + GD+IEVK+ SKQLA VLEASQLAERDVP+YI V+H+ M A F 
Sbjct: 121 IKVNGKRVNISSYKVRVGDLIEVKESSKQLAFVLEASQLAERDVPDYIEVDHNKMTAKFG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPA-LTDVPFAVQMEPHLIVEFYSR 205


>gi|299131719|ref|ZP_07024914.1| ribosomal protein S4 [Afipia sp. 1NLS2]
 gi|298591856|gb|EFI52056.1| ribosomal protein S4 [Afipia sp. 1NLS2]
          Length = 205

 Score =  227 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 134/206 (65%), Positives = 167/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +++ EA R +GD+  NLI  LE RLD IVYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYANISERQFYAVYVEATRLKGDSGENLIGLLERRLDAIVYRAKFVPTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY+ K GDVIEVK  SKQLA+VLEA+QLAERDVP++I V+H    A F 
Sbjct: 121 IKVNGKRVNIPSYKVKVGDVIEVKDASKQLATVLEANQLAERDVPDFIEVDHGKQTAKFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VP+PV M+P+L++EFYSR
Sbjct: 181 RVPN-LSEVPFPVQMEPHLIIEFYSR 205


>gi|170740488|ref|YP_001769143.1| 30S ribosomal protein S4 [Methylobacterium sp. 4-46]
 gi|226699090|sp|B0UDI8|RS4_METS4 RecName: Full=30S ribosomal protein S4
 gi|168194762|gb|ACA16709.1| RNA-binding S4 domain protein [Methylobacterium sp. 4-46]
          Length = 205

 Score =  227 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 160/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRIQAKHKLDRRLGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +I+EK+FR  + EA R RGD+  NL+  LE RLD +VYR+KFV T FAARQFVNH H
Sbjct: 61  YYANITEKQFRRYYAEAIRLRGDSGENLVGLLERRLDAVVYRSKFVATPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY  K GDVIEVK+ SKQL  V+ ASQLAERDVP+YI  +H  M A F 
Sbjct: 121 IRVNGQRVNIPSYLVKPGDVIEVKESSKQLEIVVVASQLAERDVPDYIEADHGKMTARFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VPYPV M+PN V+EFYSR
Sbjct: 181 RVPT-LSEVPYPVHMEPNQVIEFYSR 205


>gi|148259677|ref|YP_001233804.1| 30S ribosomal protein S4 [Acidiphilium cryptum JF-5]
 gi|326403353|ref|YP_004283434.1| 30S ribosomal protein S4 [Acidiphilium multivorum AIU301]
 gi|172047761|sp|A5FWA3|RS4_ACICJ RecName: Full=30S ribosomal protein S4
 gi|146401358|gb|ABQ29885.1| SSU ribosomal protein S4P [Acidiphilium cryptum JF-5]
 gi|325050214|dbj|BAJ80552.1| 30S ribosomal protein S4 [Acidiphilium multivorum AIU301]
          Length = 204

 Score =  227 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 140/206 (67%), Positives = 164/206 (79%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  SK+KI+RR+G NLWGRPKSP+N R YGPG HGQRRK KPS FG+QL AKQK++ 
Sbjct: 1   MTKRTESKYKINRRLGVNLWGRPKSPINKREYGPGQHGQRRK-KPSDFGVQLMAKQKLRG 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+F   ++EA R RGDTS NLI  LE RLD +VYR KF  T FAARQFV+H H
Sbjct: 60  YYGNISEKQFYKYYEEAVRRRGDTSENLIELLERRLDAVVYRMKFAITPFAARQFVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNGR VNI SY+ ++GDV+EV++KSKQLA VL++ Q AERDVPEYI V+H  M  TF 
Sbjct: 120 VLVNGRRVNISSYQVRDGDVVEVREKSKQLAMVLDSVQSAERDVPEYIEVDHRAMKGTFA 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLVVEFYSR
Sbjct: 180 RAP-KLADVPYPVQMEPNLVVEFYSR 204


>gi|170748158|ref|YP_001754418.1| 30S ribosomal protein S4 [Methylobacterium radiotolerans JCM 2831]
 gi|226699089|sp|B1M7L0|RS4_METRJ RecName: Full=30S ribosomal protein S4
 gi|170654680|gb|ACB23735.1| RNA-binding S4 domain protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 205

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 136/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRIQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+FR  + EA R RGD+  NL+  LE RLD +VYRAKFV T FAARQFVNH H
Sbjct: 61  YYGNITEKQFRRYYAEAIRLRGDSGENLVGLLERRLDAVVYRAKFVATPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNI SY+ K GD+IEVK+ S+QL  V+ A+QL+ERDVP+YI  +H  M A   
Sbjct: 121 VKVNGVRVNIPSYQVKAGDLIEVKESSRQLEIVIVATQLSERDVPDYIEADHAKMTARVT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIPS L +VPYPV M+PNLV+EFYSR
Sbjct: 181 RIPS-LSEVPYPVQMEPNLVIEFYSR 205


>gi|220920404|ref|YP_002495705.1| 30S ribosomal protein S4 [Methylobacterium nodulans ORS 2060]
 gi|254764597|sp|B8IB09|RS4_METNO RecName: Full=30S ribosomal protein S4
 gi|219945010|gb|ACL55402.1| RNA-binding S4 domain protein [Methylobacterium nodulans ORS 2060]
          Length = 205

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 136/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  +KHK+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRIQAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +I+EK+FR  + EA R RGD+  NLI  LE RLD ++YRAKFV T FAARQFVNH H
Sbjct: 61  YYANITEKQFRRYYAEAIRLRGDSGENLIGLLERRLDAVIYRAKFVATPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI S+  K GDVIEVK+ SKQL  V+ ASQLAERDVP+YI V+H  M A F 
Sbjct: 121 IKVNGQRVNIPSFLVKPGDVIEVKESSKQLEIVVVASQLAERDVPDYIEVDHGKMTARFT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VPYPV M+PN V+EFYSR
Sbjct: 181 RVPT-LSEVPYPVHMEPNQVIEFYSR 205


>gi|209964302|ref|YP_002297217.1| 30S ribosomal protein S4 [Rhodospirillum centenum SW]
 gi|226699112|sp|B6ISG8|RS4_RHOCS RecName: Full=30S ribosomal protein S4
 gi|209957768|gb|ACI98404.1| ribosomal protein S4 [Rhodospirillum centenum SW]
          Length = 204

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 128/206 (62%), Positives = 159/206 (77%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+ +K+KIDRR+G NLWGR KSPVN R YGPG HGQRRK KPS +G+QL AKQK+K 
Sbjct: 1   MSKRQEAKYKIDRRLGVNLWGRAKSPVNKREYGPGQHGQRRK-KPSDYGMQLMAKQKLKG 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I EK+FR +++EA R +GD+  NLI  LE RLD +VYR KF  T FA+RQ +NH H
Sbjct: 60  YYGNIGEKQFRRLYQEAVRRKGDSGENLIQLLERRLDAVVYRMKFAATPFASRQLINHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR VNI SY  K+GD IEV+ K+KQ A V+EA+   ERD+P+Y+SV+   +  T+V
Sbjct: 120 ILVNGRRVNIPSYTVKDGDSIEVRSKAKQFAFVMEAAASGERDIPDYLSVDSQALKGTYV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLV+EFYSR
Sbjct: 180 RAPG-LADVPYPVQMEPNLVIEFYSR 204


>gi|313901705|ref|ZP_07835135.1| SSU ribosomal protein S4P [Thermaerobacter subterraneus DSM 13965]
 gi|313468023|gb|EFR63507.1| SSU ribosomal protein S4P [Thermaerobacter subterraneus DSM 13965]
          Length = 201

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 89/206 (43%), Positives = 132/206 (64%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    KH + RR+G  L G PK P   R Y PG HG  R+ K S +G +L  KQK++ 
Sbjct: 1   MARYTGPKHAMCRRVGRPLCGSPKCPALKRPYPPGQHGPGRRQKLSEYGRRLLEKQKLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  F+ A RS+G+T   L+  LE+RLD +VYR  F PTI+AARQ V H H
Sbjct: 61  MYGVL-ERQFRRYFERAQRSKGNTGERLLQLLETRLDNLVYRMGFAPTIWAARQLVVHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR V+  SY+ + GDVI V++KS+++  + E+ + A+R  PEY+SV  +    T +
Sbjct: 120 IQVNGRKVDRPSYQVRPGDVIAVREKSRRIPLIQESLENAQR-APEYLSVEPERFQGTLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+  +    P+ ++ +L+VEFYSR
Sbjct: 179 RVPARDE---IPIDIEESLIVEFYSR 201


>gi|87200259|ref|YP_497516.1| 30S ribosomal protein S4 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123488982|sp|Q2G641|RS4_NOVAD RecName: Full=30S ribosomal protein S4
 gi|87135940|gb|ABD26682.1| SSU ribosomal protein S4P [Novosphingobium aromaticivorans DSM
           12444]
          Length = 203

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 126/206 (61%), Positives = 162/206 (78%), Gaps = 3/206 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR++SK+KIDRR+GEN+WGRPKS VN RSYGPG HGQRRKSK S FG+QLRAKQK+K 
Sbjct: 1   MSKRKASKYKIDRRLGENIWGRPKSSVNRRSYGPGQHGQRRKSKVSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+  ++EA + +GDT  NLI  LE RLD +VYRAKF PTIF+ARQ V+H H
Sbjct: 61  YYGDVTEKQFKRTYQEASKMKGDTGQNLIGLLEQRLDMVVYRAKFAPTIFSARQVVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S R + GDV+ + +K+K++A + EA  L ER+VP+Y++ + D    TF 
Sbjct: 121 IYVNGVKCNIASRRVRPGDVVSLGKKAKEMALIAEAQALPEREVPDYVAADGDK--VTFT 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VPYPV M+PNLVVEFYSR
Sbjct: 179 RVPT-LDEVPYPVKMEPNLVVEFYSR 203


>gi|205374494|ref|ZP_03227290.1| 30S ribosomal protein S4 [Bacillus coahuilensis m4-4]
          Length = 200

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A + +G    N +  LE RLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRNLFDKAAKIQGKHGENFMVLLECRLDNVVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG  V+I S+R + G VI V++KS+ L  + EA ++    VPEY++ + D +  TF 
Sbjct: 119 VLVNGSRVDIPSFRVQPGQVIGVREKSRNLDIIKEAIEV-NNFVPEYLTFDADKLEGTFN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|304391422|ref|ZP_07373364.1| ribosomal protein S4 [Ahrensia sp. R2A130]
 gi|303295651|gb|EFL90009.1| ribosomal protein S4 [Ahrensia sp. R2A130]
          Length = 205

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 140/206 (67%), Positives = 169/206 (82%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR++SK+K+DRR+GEN+WGRPKSPVN R YGPG HGQ RK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRQASKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQGRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR IF +A+  +GDT  NLI  LE RLDTI+YRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGNISEKQFRKIFDQANAQKGDTGENLIGLLERRLDTIIYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG   NI SYRCK GDVIE+++KSKQLA VLE+  LAERDVPEY++ +H  M  + V
Sbjct: 121 LLVNGVRTNIPSYRCKPGDVIEIREKSKQLAIVLESVGLAERDVPEYVTADHSKMTCSLV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+   DVP+PV+M+PNL VEFYSR
Sbjct: 181 TVPA-FGDVPFPVLMEPNLTVEFYSR 205


>gi|288959195|ref|YP_003449536.1| small subunit ribosomal protein S4 [Azospirillum sp. B510]
 gi|288911503|dbj|BAI72992.1| small subunit ribosomal protein S4 [Azospirillum sp. B510]
          Length = 204

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 131/206 (63%), Positives = 157/206 (76%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+ SK+KIDRR+G NLWGR KSP+N R YGPG HGQRRK KPS +GLQL AKQK+K 
Sbjct: 1   MSKRQESKYKIDRRLGVNLWGRAKSPLNKREYGPGQHGQRRK-KPSDYGLQLMAKQKLKG 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I EK+FR I+ EA R +GDT  NLI  LE RLD +VYR KF PT FAARQ +NH H
Sbjct: 60  YYGNIGEKQFRRIYAEAVRRKGDTGENLIGLLERRLDAVVYRMKFAPTPFAARQLINHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR +NI S R K+ D +EV+ KSKQ+A VLEA+   ERD+P+Y+ V+   +   FV
Sbjct: 120 ILVNGRRLNIASARIKDNDTVEVRAKSKQMALVLEAAASGERDIPDYLEVDSSALKGRFV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLV+EFYSR
Sbjct: 180 RAPL-LADVPYPVQMEPNLVIEFYSR 204


>gi|319651867|ref|ZP_08005992.1| 30S ribosomal protein S4 [Bacillus sp. 2_A_57_CT2]
 gi|317396519|gb|EFV77232.1| 30S ribosomal protein S4 [Bacillus sp. 2_A_57_CT2]
          Length = 200

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRNLFDKAGKMPGKHGENFMILLESRLDNVVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR   G  I +++KS+ L  V EA ++    VP+++S + D +  TF 
Sbjct: 119 IMVDGSRVDIPSYRVAPGQTITLREKSRSLDIVKEAIEV-NNFVPDFVSFDADKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +  +L+VEFYSR
Sbjct: 178 RMPERSE---LPAEINESLIVEFYSR 200


>gi|296444481|ref|ZP_06886446.1| ribosomal protein S4 [Methylosinus trichosporium OB3b]
 gi|296258128|gb|EFH05190.1| ribosomal protein S4 [Methylosinus trichosporium OB3b]
          Length = 205

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 131/206 (63%), Positives = 159/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  SK+K+DRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QL+AKQK+K 
Sbjct: 1   MTKRAESKYKLDRRLGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  + EA R +GD+  NLI  LE RLD +VYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYGNISEKQFRKYYAEAIRLKGDSGDNLIGLLERRLDAVVYRAKFVPTVFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SY  K  DV+EVK+ SKQ  +VLE+  L ERDVP+Y  V+H+ M A   
Sbjct: 121 IRVNGRRVNIPSYLVKLDDVVEVKESSKQAITVLESVALGERDVPDYYEVDHNKMTAKLN 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P    +VPYPV M+PNLV+EFYSR
Sbjct: 181 RVPL-PNEVPYPVQMEPNLVIEFYSR 205


>gi|90423114|ref|YP_531484.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris BisB18]
 gi|122476766|sp|Q218M1|RS4_RHOPB RecName: Full=30S ribosomal protein S4
 gi|90105128|gb|ABD87165.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris BisB18]
          Length = 205

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 136/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F SI+ EA R +GD+  NLI  LE RLDT+VYRAKFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHSIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVSTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY+ K GD++EVK+ SKQL  VLEA+QLAERDVP++I V+H  M A F+
Sbjct: 121 VKVNGKRVNIASYKVKVGDLVEVKESSKQLTFVLEANQLAERDVPDFIEVDHGKMTAKFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPH-LSDVPFAVQMEPHLIVEFYSR 205


>gi|329851321|ref|ZP_08266078.1| ribosomal protein S4 [Asticcacaulis biprosthecum C19]
 gi|328840167|gb|EGF89739.1| ribosomal protein S4 [Asticcacaulis biprosthecum C19]
          Length = 205

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 129/205 (62%), Positives = 164/205 (80%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DR +GENLWGRPKSPVN RSYGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRHSAKYKLDRVMGENLWGRPKSPVNKRSYGPGQHGQRRKQKISDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+F   ++EA R +G+TS NLI+ LE+RLD +VYRAKFVPT++AARQFVNH H
Sbjct: 61  YYGNITEKQFLRTYEEASRRKGNTSENLIALLETRLDALVYRAKFVPTVWAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SYR K  DV+EV+++S+ +A VLEA Q  ERDVP+YI ++     A  +
Sbjct: 121 VTVNGQRVNIPSYRVKPDDVVEVRERSRSMALVLEALQSPERDVPDYIELDAKGQKARLI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R+P   + VPYPV M+P+L+VE+YS
Sbjct: 181 RLPELAE-VPYPVKMEPHLIVEYYS 204


>gi|317122229|ref|YP_004102232.1| 30S ribosomal protein S4P [Thermaerobacter marianensis DSM 12885]
 gi|315592209|gb|ADU51505.1| SSU ribosomal protein S4P [Thermaerobacter marianensis DSM 12885]
          Length = 201

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 88/206 (42%), Positives = 131/206 (63%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    KH + RR+G  L G PK P   R Y PG HG  R+ K S +G +L  KQK++ 
Sbjct: 1   MARYTGPKHAMCRRVGRPLCGSPKCPALKRPYPPGQHGPGRRQKLSEYGRRLLEKQKLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  F+ A RS+G+T   L+  LE+RLD +VYR  F P+I+AARQ V H H
Sbjct: 61  MYGVL-ERQFRRYFERAQRSKGNTGERLLQLLETRLDNLVYRMGFAPSIWAARQLVVHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR V+  SY+ + GDVI V++KS+++  + E+   A+R  P+Y+SV  +    T +
Sbjct: 120 IQVNGRKVDRPSYQVRPGDVIAVREKSRRIPLIQESLANAQR-APDYLSVEPERFQGTLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+PS  +    P+ ++ +L+VEFYSR
Sbjct: 179 RVPSRDE---IPIDIEESLIVEFYSR 201


>gi|212638314|ref|YP_002314834.1| 30S ribosomal protein S4 [Anoxybacillus flavithermus WK1]
 gi|212559794|gb|ACJ32849.1| Ribosomal protein S4 [Anoxybacillus flavithermus WK1]
          Length = 219

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +G+QL+ KQK++ 
Sbjct: 20  MARYTGPTWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRKKLSEYGMQLQEKQKLRH 78

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F+EA +  G    N +  LESRLD +VYR  F  T   ARQ VNH H
Sbjct: 79  MYG-VNERQFRKTFEEAGKMAGKHGENFMILLESRLDNLVYRLGFARTRRQARQLVNHGH 137

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I SYR K G  I V++KS+ L  + EA ++    VP+Y++++ D +  T+ 
Sbjct: 138 ILVDGSRVDIPSYRVKPGQTISVREKSRNLQIIKEALEV-NSFVPDYLTLDADKLEGTYT 196

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 197 RLPERSE---LPAEINEALIVEFYSR 219


>gi|75675508|ref|YP_317929.1| 30S ribosomal protein S4 [Nitrobacter winogradskyi Nb-255]
 gi|90101700|sp|Q3ST14|RS4_NITWN RecName: Full=30S ribosomal protein S4
 gi|74420378|gb|ABA04577.1| SSU ribosomal protein S4P [Nitrobacter winogradskyi Nb-255]
          Length = 205

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 166/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISE++F +I+ EA R +GD+  NLI  LE RLDT+VYRAKFVPTIFAARQF+NH H
Sbjct: 61  YYGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTIFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SY+ K GD +EVK  SKQLA VLEA+QLAERDVP++I  +H+   A F+
Sbjct: 121 VKVNGRRVNIPSYKLKVGDTVEVKDASKQLALVLEANQLAERDVPDFIDADHNKQSAKFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPQ-LADVPFAVQMEPHLIVEFYSR 205


>gi|296532411|ref|ZP_06895138.1| 30S ribosomal protein S4 [Roseomonas cervicalis ATCC 49957]
 gi|296267254|gb|EFH13152.1| 30S ribosomal protein S4 [Roseomonas cervicalis ATCC 49957]
          Length = 205

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 130/206 (63%), Positives = 158/206 (76%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  SK+KI+RR+G NLWGR KSPV  R YGPG HGQRRK KP+ FG+QL AKQK+K 
Sbjct: 1   MTKRAESKYKINRRLGVNLWGRAKSPVAKREYGPGQHGQRRKQKPTDFGVQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I EK+FR  ++EA R +GDTS NLI  LE RLD +VYR K   T FAARQFVNH H
Sbjct: 61  YYGNIGEKQFRKYYEEAVRRKGDTSENLIELLERRLDAVVYRLKLAVTPFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY  ++ DVIEVK+KSKQL +VL+A+Q  ER+VPEY+ ++H  M   F+
Sbjct: 121 ITVNGKRVNIPSYLVRDNDVIEVKEKSKQLVAVLDAAQSGEREVPEYLEIDHRQMKGRFL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L DVPYPV M+PNLV+EFYSR
Sbjct: 181 RAP-KLSDVPYPVQMEPNLVIEFYSR 205


>gi|229543523|ref|ZP_04432583.1| ribosomal protein S4 [Bacillus coagulans 36D1]
 gi|229327943|gb|EEN93618.1| ribosomal protein S4 [Bacillus coagulans 36D1]
          Length = 200

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F + F +A + +G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-LNERQFHNTFLKAGKMQGKHGENFMVLLESRLDNLVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SYR + G  I V++KS+ L  + EA +     VP+Y+S + D +  T+ 
Sbjct: 119 ILVDGKRVDIPSYRVEPGQTIGVREKSRNLDVIKEAIETTTF-VPDYLSFDADKLEGTYS 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +  +L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINESLIVEFYSR 200


>gi|295399544|ref|ZP_06809526.1| ribosomal protein S4 [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109901|ref|YP_003988217.1| ribosomal protein S4 [Geobacillus sp. Y4.1MC1]
 gi|294979010|gb|EFG54606.1| ribosomal protein S4 [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215002|gb|ADP73606.1| ribosomal protein S4 [Geobacillus sp. Y4.1MC1]
          Length = 200

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F+EA +  G    N +  LESRLD +VYR  F  T   ARQ V H H
Sbjct: 60  MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGFARTRRQARQLVTHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  VNI SYR K G  I V++KS+ L  + EA +L    VP+Y++++ D +  T+ 
Sbjct: 119 ILVDGNRVNIPSYRVKPGQTISVREKSRNLQVIKEALEL-NNFVPDYLTLDADKLEGTYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +  +L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINESLIVEFYSR 200


>gi|294084244|ref|YP_003551002.1| 30S ribosomal protein S4:RNA-binding S4:30S ribosomal protein S4,
           bacterial and organelle form [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663817|gb|ADE38918.1| Ribosomal protein S4:RNA-binding S4:Ribosomal protein S4, bacterial
           and organelle form [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 208

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 127/210 (60%), Positives = 159/210 (75%), Gaps = 6/210 (2%)

Query: 1   MSK----RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    R S+KHKIDRR+G NLWGRPKSPVN R YGPG HGQRRK KP+ FG+QL AKQ
Sbjct: 1   MAKSDHKRHSAKHKIDRRLGVNLWGRPKSPVNAREYGPGQHGQRRK-KPTDFGVQLMAKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K YYG+I EK+F+  ++ A R +GDT  NLI  LE RLD I+YR+K VPT+FAARQ +
Sbjct: 60  KLKGYYGNIGEKQFKKYYQAAARGKGDTGQNLIGILECRLDAILYRSKMVPTVFAARQII 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
           NH H+++NG+  NI S   K GD I +K+K+K + +VL+A    ERDVPEY+ VNHD   
Sbjct: 120 NHGHIMLNGKRCNIASVMLKPGDEIALKEKAKTIPAVLDAIASVERDVPEYVDVNHDKFT 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A F+RIP+ L +VPYPV M+PNLVVE+YSR
Sbjct: 180 AKFIRIPT-LDEVPYPVQMEPNLVVEYYSR 208


>gi|239828057|ref|YP_002950681.1| 30S ribosomal protein S4 [Geobacillus sp. WCH70]
 gi|259495282|sp|C5D699|RS4_GEOSW RecName: Full=30S ribosomal protein S4
 gi|239808350|gb|ACS25415.1| ribosomal protein S4 [Geobacillus sp. WCH70]
          Length = 200

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPTWKISRRLGISLSGTGKE-LQKRPYPPGQHGPSQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F+EA +  G    N +  LESRLD +VYR  F  T   ARQ V H H
Sbjct: 60  MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGFARTRRQARQLVTHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  VNI SYR K G  I V++KS+ L  + EA +L    VP+Y++++ + +  T+ 
Sbjct: 119 ILVDGNRVNIPSYRVKPGQTISVREKSRNLQVIKEALEL-NNFVPDYLTLDAEKLEGTYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPSEINEALIVEFYSR 200


>gi|152112255|sp|Q07R54|RS4_RHOP5 RecName: Full=30S ribosomal protein S4
          Length = 205

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +I+ EA R +GD+  NLI  LE RLDT+VYRAKFV T+FAARQF+NH H
Sbjct: 61  YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVATMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY+ K GD+IEVK+ SKQLA VLEASQL ERD P+Y+ V+H  M A F+
Sbjct: 121 VKVNGKRVNISSYKVKVGDLIEVKESSKQLAFVLEASQLGERDTPDYVEVDHSKMTAKFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RVPH-LSDVPFAVQMEPHLIVEFYSR 205


>gi|121534659|ref|ZP_01666480.1| ribosomal protein S4 [Thermosinus carboxydivorans Nor1]
 gi|121306679|gb|EAX47600.1| ribosomal protein S4 [Thermosinus carboxydivorans Nor1]
          Length = 208

 Score =  225 bits (573), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      +  RR G  L+ +       K P + R Y PG HGQ RK    Y GLQLR 
Sbjct: 1   MARYTGPVCRQCRREGLKLYLKGDKCYSDKCPFSRRGYAPGQHGQARKKLSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR+ F++ADR +G T  NL+  LE RLD +VYR         ARQ
Sbjct: 60  KQKARRIYG-ILEGQFRNYFEKADRQKGITGENLLIMLERRLDNVVYRLGLAANRTQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173
            V H H  VNGR V+I S++ K GDVI+V++ SK      E A  LA + VP ++ ++ +
Sbjct: 119 LVRHGHFTVNGRRVDIPSFQVKVGDVIQVRESSKDSPLFKEIAEGLAHKTVPAWLELSAN 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +M    VR P+  +     V +Q +L+VE YSR
Sbjct: 179 DMSGKVVRYPTREE---IDVPIQEHLIVELYSR 208


>gi|217976302|ref|YP_002360449.1| 30S ribosomal protein S4 [Methylocella silvestris BL2]
 gi|254764599|sp|B8EL92|RS4_METSB RecName: Full=30S ribosomal protein S4
 gi|217501678|gb|ACK49087.1| RNA-binding S4 domain protein [Methylocella silvestris BL2]
          Length = 205

 Score =  225 bits (573), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 137/206 (66%), Positives = 163/206 (79%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QL+AKQK+K 
Sbjct: 1   MTKRAEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGTQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+FR  + EA R RGD+  NLI  LE RLD ++YRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGNISEKQFRKYYAEAIRLRGDSGDNLIGLLERRLDAVIYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY  K GDVIEVK+ S+++  VLEA QLAERDVP+Y  V+H+ M A   
Sbjct: 121 VKVNGKRVNIASYLVKVGDVIEVKESSREILIVLEAKQLAERDVPDYYEVDHNKMTAKIT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP    DVPYPV+M+PNLV+EFYSR
Sbjct: 181 RIPL-PADVPYPVLMEPNLVIEFYSR 205


>gi|158319571|ref|YP_001512078.1| ribosomal protein S4 [Alkaliphilus oremlandii OhILAs]
 gi|172048249|sp|A8MLG8|RS4A_ALKOO RecName: Full=30S ribosomal protein S4 A
 gi|158139770|gb|ABW18082.1| ribosomal protein S4 [Alkaliphilus oremlandii OhILAs]
          Length = 207

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K  ++ R+Y PG HGQ RK   +Y GLQLR 
Sbjct: 1   MARYTEAVCRLCRREGMKLYLKGDRCYTDKCAISKRTYAPGQHGQSRKKLSNY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K++YG + E +FR  F+ AD+  G T  NL+  LE+RLD + YR  F  +   ARQ
Sbjct: 60  KQKAKRFYGVL-ESQFRKYFEIADKQAGITGENLLRLLETRLDNVAYRLGFGSSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  VNG+ V+I SY    GD I V +KSK  A     ++ A+ + P +++V+ + 
Sbjct: 119 LVVHGHFTVNGKKVDIPSYLVSAGDTIAVAEKSKSSAKFKALAENAKGNTPNWLTVDVEK 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V +PS        + +  NL+VE YS+
Sbjct: 179 LEGKVVALPSR---EDIDLEIAENLIVELYSK 207


>gi|89100095|ref|ZP_01172964.1| 30S ribosomal protein S4 [Bacillus sp. NRRL B-14911]
 gi|89085185|gb|EAR64317.1| 30S ribosomal protein S4 [Bacillus sp. NRRL B-14911]
          Length = 200

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRRKISEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VTERQFRNLFDKAGKMAGKHGENFMVLLESRLDNVVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR + G  I +++KS+ L  V EA ++    VP++++ + D +  +F 
Sbjct: 119 IIVDGGRVDIPSYRVQPGQTITLREKSRGLDIVKEAIEV-NNFVPDFLTFDADKLEGSFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|300023627|ref|YP_003756238.1| ribosomal protein S4 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525448|gb|ADJ23917.1| ribosomal protein S4 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 205

 Score =  224 bits (572), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 133/206 (64%), Positives = 161/206 (78%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +KHKIDRR+GEN+WGRPKSP+N R   PG HG+RR  K S FG QL+AKQK+K 
Sbjct: 1   MTKRIRAKHKIDRRLGENIWGRPKSPLNRRESRPGQHGERRSGKLSDFGQQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG ISE++FR+ + EA R +G TS  LI  LE RLD +VYRAKFVPT+FAARQFV+H H
Sbjct: 61  YYGSISERQFRAAYDEASRLKGSTSELLIGLLERRLDALVYRAKFVPTVFAARQFVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V I SYR + GDVIEV +K+KQLA VLEA + AERDVP+Y++ +H+ M A   
Sbjct: 121 VTVNGKRVTIPSYRLRIGDVIEVTEKAKQLALVLEAIKSAERDVPDYVNADHNKMTAALT 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L DVPYPV M+PNLVVEFYSR
Sbjct: 181 RIPA-LSDVPYPVQMEPNLVVEFYSR 205


>gi|138896341|ref|YP_001126794.1| 30S ribosomal protein S4 [Geobacillus thermodenitrificans NG80-2]
 gi|196249964|ref|ZP_03148659.1| ribosomal protein S4 [Geobacillus sp. G11MC16]
 gi|172044188|sp|A4IRU5|RS4_GEOTN RecName: Full=30S ribosomal protein S4
 gi|134267854|gb|ABO68049.1| Ribosomal protein S4 (BS4) [Geobacillus thermodenitrificans NG80-2]
 gi|196210478|gb|EDY05242.1| ribosomal protein S4 [Geobacillus sp. G11MC16]
          Length = 200

 Score =  224 bits (572), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPTWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F EA +  G    N +  LESRLD +VYR     T   ARQ V H H
Sbjct: 60  MYG-VNERQFRKTFDEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  VNI SYR K G  I V++KS+ L  + EA ++    VP+Y++ + + +  T+ 
Sbjct: 119 ILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEAIEV-NNFVPDYLTFDPEKLEGTYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|85715178|ref|ZP_01046162.1| Ribosomal protein S4 [Nitrobacter sp. Nb-311A]
 gi|85698093|gb|EAQ35966.1| Ribosomal protein S4 [Nitrobacter sp. Nb-311A]
          Length = 205

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 137/206 (66%), Positives = 166/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISE++F +I+ EA R +GD+  NLI  LE RLDT+VYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SY+ K GD +EVK  SKQLA VLEA+QLAERDVP++I  +H+   A F+
Sbjct: 121 VKVNGRRVNIPSYKLKVGDTVEVKDASKQLALVLEANQLAERDVPDFIDADHNKQSAKFI 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPQ-LADVPFAVQMEPHLIVEFYSR 205


>gi|262383848|ref|ZP_06076984.1| 30S ribosomal protein S4 [Bacteroides sp. 2_1_33B]
 gi|301312006|ref|ZP_07217928.1| ribosomal protein S4 [Bacteroides sp. 20_3]
 gi|262294746|gb|EEY82678.1| 30S ribosomal protein S4 [Bacteroides sp. 2_1_33B]
 gi|300830108|gb|EFK60756.1| ribosomal protein S4 [Bacteroides sp. 20_3]
          Length = 201

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A RS+G T   L+  LE RLD +VYR    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNMVYRLGMAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V++KSK +  + +A          +I  +  +M    +
Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHSKYPWIEWDQSSMSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++  L+VE YS+
Sbjct: 179 HLPERTD---IPENIKEQLIVELYSK 201


>gi|115523649|ref|YP_780560.1| 30S ribosomal protein S4 [Rhodopseudomonas palustris BisA53]
 gi|115517596|gb|ABJ05580.1| SSU ribosomal protein S4P [Rhodopseudomonas palustris BisA53]
          Length = 222

 Score =  224 bits (571), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 18  MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 77

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +I+ EA R +GD+  NLI  LE RLDT+VYRAKFV T+FAARQF+NH H
Sbjct: 78  YYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVATMFAARQFINHGH 137

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY+ K GD+IEVK+ SKQLA VLEASQL ERD P+Y+ V+H  M A F+
Sbjct: 138 VKVNGKRVNISSYKVKVGDLIEVKESSKQLAFVLEASQLGERDTPDYVEVDHSKMTAKFI 197

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L DVP+ V M+P+L+VEFYSR
Sbjct: 198 RVPH-LSDVPFAVQMEPHLIVEFYSR 222


>gi|51894183|ref|YP_076874.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863]
 gi|81691984|sp|Q67JX0|RS4A_SYMTH RecName: Full=30S ribosomal protein S4 A
 gi|51857872|dbj|BAD42030.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863]
          Length = 207

 Score =  224 bits (570), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K P+  R+  PG HG  R+ KP+ + +QLR 
Sbjct: 1   MARYTGPVCRLCRREGVKLYLKGEKCYSDKCPIVKRATPPGQHGASRR-KPTEYAIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++YYG + E++F   F+ A R +G T   L+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKARRYYGVL-ERQFERYFEMASRKKGVTGEVLLQTLERRLDNVVYRMGFAASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H+ VNGR VNI SY  +EGDV+ V++ S++   + E +  A R VP ++SV+ + 
Sbjct: 119 IVKHSHIEVNGRKVNIPSYLVREGDVVAVRESSREHKRIKELAAAATRTVPAWLSVDPEA 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  T +R+P+  +       +Q  L+VEFYSR
Sbjct: 179 LRGTVLRLPNRDE---IDTPVQEQLIVEFYSR 207


>gi|304319733|ref|YP_003853376.1| 30S ribosomal protein S4 [Parvularcula bermudensis HTCC2503]
 gi|303298636|gb|ADM08235.1| 30S ribosomal protein S4 [Parvularcula bermudensis HTCC2503]
          Length = 205

 Score =  224 bits (570), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 128/204 (62%), Positives = 159/204 (77%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+++K+KIDRR+GEN+WGRPKSP N R Y PG+HGQRR  K S FG QL AKQK+K 
Sbjct: 1   MSKRQNAKYKIDRRVGENIWGRPKSPFNRREYKPGMHGQRRAGKMSDFGQQLMAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK+F+ I+ EA + +G+T+  +I  LESRLD +VYRAKFVPT+FAARQFVNH H
Sbjct: 61  YYGNISEKQFQRIYDEAAKRKGNTAELMIGILESRLDAVVYRAKFVPTVFAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG   NI SYR K GDV+EV+++SK +A VLEA QL ERD+P+Y+ V+   M AT V
Sbjct: 121 VKVNGVRTNIPSYRLKPGDVVEVRERSKNMALVLEALQLPERDIPDYVDVDPKKMTATLV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R+P    DVPY   M+PNLVVE+Y
Sbjct: 181 RVPE-FSDVPYAATMEPNLVVEYY 203


>gi|255014789|ref|ZP_05286915.1| 30S ribosomal protein S4 [Bacteroides sp. 2_1_7]
 gi|256841040|ref|ZP_05546547.1| ribosomal protein S4 [Parabacteroides sp. D13]
 gi|298375808|ref|ZP_06985764.1| ribosomal protein S4 [Bacteroides sp. 3_1_19]
 gi|256736883|gb|EEU50210.1| ribosomal protein S4 [Parabacteroides sp. D13]
 gi|298266845|gb|EFI08502.1| ribosomal protein S4 [Bacteroides sp. 3_1_19]
          Length = 201

 Score =  223 bits (569), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A RS+G T   L+  LE RLD +VYR    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVYRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V++KSK +  + +A          +I  +  +M    +
Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHSKYPWIEWDQSSMSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++  L+VE YS+
Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201


>gi|172049036|sp|A6LEG6|RS4_PARD8 RecName: Full=30S ribosomal protein S4
          Length = 201

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A RS+G T   L+  LE RLD +VYR    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVYRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V++KSK +  + +A          +I  +  +M    +
Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHSQYPWIEWDQSSMSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++  L+VE YS+
Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201


>gi|296283999|ref|ZP_06861997.1| 30S ribosomal protein S4 [Citromicrobium bathyomarinum JL354]
          Length = 204

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 128/206 (62%), Positives = 158/206 (76%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKGKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+  ++EA R +GDT  NLI  LE RLD +VYRAKF PTIFAARQ VNH H
Sbjct: 61  YYGDVTEKQFKRTYQEAARIKGDTGQNLIGLLEQRLDMVVYRAKFAPTIFAARQLVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S R   GDVI +  K+K +A V+EA  L ERD+P+Y++ +  +   TF 
Sbjct: 121 ITVNGGKCNIPSRRVVVGDVIGLGAKAKDMALVIEAQSLPERDIPDYVAPDGTD-KVTFT 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L +VPYPV M+PNL+VEFYSR
Sbjct: 180 RVP-KLDEVPYPVTMEPNLIVEFYSR 204


>gi|253998040|ref|YP_003050103.1| 30S ribosomal protein S4 [Methylovorus sp. SIP3-4]
 gi|313200105|ref|YP_004038763.1| 30S ribosomal protein S4 [Methylovorus sp. MP688]
 gi|253984719|gb|ACT49576.1| ribosomal protein S4 [Methylovorus sp. SIP3-4]
 gi|312439421|gb|ADQ83527.1| ribosomal protein S4 [Methylovorus sp. MP688]
          Length = 209

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R++ PG HGQRR  + S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIEKRNFPPGQHGQRRNQRLSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FRS + EADR +G T  NL+  LE RLD + YR     +   ARQ
Sbjct: 61  KQKVRRIYG-ILEGQFRSYYAEADRLKGITGENLLQLLECRLDNVAYRMGLGSSRTEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  +LVNG+ VNI SY+ + GDV++V + SK    +  A + AE R  PE++ V+  
Sbjct: 120 IVRHNSILVNGKRVNIPSYQVRPGDVVQVAEASKSQLRIKGALEAAEQRGFPEWLEVDVK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  TF   P   +    P  +  +LVVE YS+
Sbjct: 180 ALKGTFKAKPQRDE---LPATINESLVVELYSK 209


>gi|154494405|ref|ZP_02033725.1| hypothetical protein PARMER_03760 [Parabacteroides merdae ATCC
           43184]
 gi|154085849|gb|EDN84894.1| hypothetical protein PARMER_03760 [Parabacteroides merdae ATCC
           43184]
          Length = 201

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKTRIARKFGEAIFGPDK-VLSKKNYPPGQHGNARKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A RS+G T   L+  LESRLD +V+R    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLESRLDNVVFRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G VI V++KSK L  + +A          +I  +  ++    +
Sbjct: 119 ITVDGKVVNIPSYSVKAGQVIGVREKSKSLEVIADALSGFNHSKYPWIEWDQSSLSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++  L+VE YS+
Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201


>gi|239996313|ref|ZP_04716837.1| 30S ribosomal protein S4 [Alteromonas macleodii ATCC 27126]
 gi|332142182|ref|YP_004427920.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226697796|sp|B4RT52|RS4_ALTMD RecName: Full=30S ribosomal protein S4
 gi|327552204|gb|AEA98922.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 206

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNG+ VNI S+     DV+ V++K+K+ A ++ A +LA +R+ P +I V+   M
Sbjct: 119 SHKAIMVNGQVVNIPSFNVSAEDVVSVREKAKKQARIVAALELADQREKPTWIEVDSSKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRVPERTD---LSAEINEQLIVELYSK 206


>gi|114798436|ref|YP_760657.1| 30S ribosomal protein S4 [Hyphomonas neptunium ATCC 15444]
 gi|123323195|sp|Q0C0T6|RS4_HYPNA RecName: Full=30S ribosomal protein S4
 gi|114738610|gb|ABI76735.1| ribosomal protein S4 [Hyphomonas neptunium ATCC 15444]
          Length = 205

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 128/205 (62%), Positives = 161/205 (78%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+R S+K+KIDRR+GEN+WGR KSP N R+Y PG HGQ R++K S FG+QL AKQK+K 
Sbjct: 1   MSRRHSAKYKIDRRVGENIWGRAKSPFNKRNYKPGQHGQNRRNKVSDFGMQLMAKQKLKA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI+EK+F   + EA R +G+++ NLI  LESRLD +VYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYGDITEKQFAKTYVEAARMKGNSAENLIGLLESRLDAVVYRAKFVPTVFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V+VNGR  NIGS R K GDV++V++KS+ LA VLEA    ERD+PEY+ V+   M AT+ 
Sbjct: 121 VMVNGRRCNIGSARLKPGDVVQVREKSRNLALVLEALGSPERDIPEYVEVDPKAMTATYK 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R+P+ L DVPYPV M+P  VVEFYS
Sbjct: 181 RVPA-LADVPYPVKMEPAQVVEFYS 204


>gi|213962933|ref|ZP_03391193.1| ribosomal protein S4 [Capnocytophaga sputigena Capno]
 gi|213954590|gb|EEB65912.1| ribosomal protein S4 [Capnocytophaga sputigena Capno]
          Length = 201

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    ++Y PG HG  RR++K S + +QL+ KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FERKNYPPGQHGLARRRAKRSEYAIQLQEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+F +++++A RS+  T   L+   ESRLD +VYR    PT  AARQ V+HR
Sbjct: 60  YTYG-ILEKQFHNLYEKAKRSKHITGEVLLQLCESRLDNVVYRMGIAPTRSAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK L+ + E S  A   V E+I+ N + +  TF
Sbjct: 119 HITVNGNIVNIPSYSLKPGDVVGVREKSKSLSVI-ENSLAAHSTVYEWITWNPEKLEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     +  P  ++  L+VE YS+
Sbjct: 178 VAVPQR---IQIPENIKEQLIVELYSK 201


>gi|149181086|ref|ZP_01859586.1| 30S ribosomal protein S4 [Bacillus sp. SG-1]
 gi|148851173|gb|EDL65323.1| 30S ribosomal protein S4 [Bacillus sp. SG-1]
          Length = 200

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKISEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F  A + +G    N ++ LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VTERQFRNLFDRAGKMQGKHGENFMALLESRLDNVVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V V+G  V+I SYR + G  I V++KS+ L  V EA ++    VP++++ + D +  +F 
Sbjct: 119 VTVDGSRVDIPSYRLQAGQTIGVREKSRNLNIVKEALEV-NSFVPDFLTFDADKLEGSFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|326387399|ref|ZP_08209008.1| 30S ribosomal protein S4 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208055|gb|EGD58863.1| 30S ribosomal protein S4 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 204

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 129/206 (62%), Positives = 161/206 (78%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR++SK+KIDRR+GEN+WGRPKS VN RSYGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRKASKYKIDRRLGENIWGRPKSSVNRRSYGPGQHGQRRKGKLSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+S ++EA R +GDT  NL+  LE RLD +VYR+KF PTIFAARQ VNH H
Sbjct: 61  YYGDVTEKQFKSTYQEASRMKGDTGQNLVGLLEQRLDMVVYRSKFAPTIFAARQIVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S R + GDVI +  K+K++A + EA  L ERDVP+Y+ ++  +   TFV
Sbjct: 121 IRVNGVKCNIASRRVRPGDVITLGTKAKEMALIAEAQALPERDVPDYVLIDGTD-KVTFV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVP-KLDEVPYPVKMEPNLVVEFYSR 204


>gi|218262262|ref|ZP_03476785.1| hypothetical protein PRABACTJOHN_02459 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223485|gb|EEC96135.1| hypothetical protein PRABACTJOHN_02459 [Parabacteroides johnsonii
           DSM 18315]
          Length = 201

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKTRIARKFGEAIFGPDK-VLSKKNYPPGQHGNARKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A RS+G T   L+  LE RLD +V+R    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G VI V++KSK L  + +A          +I  +  ++    +
Sbjct: 119 ITVDGKVVNIPSYSVKAGQVIGVREKSKSLEVIADALSGFNHSKYPWIEWDQSSLSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++  L+VE YS+
Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201


>gi|26454648|sp|P81288|RS4_BACST RecName: Full=30S ribosomal protein S4; AltName: Full=BS5
          Length = 200

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F+EA +  G    N +  LESRLD +VYR     T   ARQ V H H
Sbjct: 60  MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SYR K G  I V++KS+ L  + EA + A   +P+Y+S + + M  T+ 
Sbjct: 119 IIVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLSFDPEKMEGTYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|34499616|ref|NP_903831.1| 30S ribosomal protein S4 [Chromobacterium violaceum ATCC 12472]
 gi|41017823|sp|Q7NQH6|RS4_CHRVO RecName: Full=30S ribosomal protein S4
 gi|34105467|gb|AAQ61822.1| 30S ribosomal protein S4 [Chromobacterium violaceum ATCC 12472]
          Length = 206

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRALDSKCKLDAAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ F EA R +G T  NL+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRNYFAEAVRRKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI SY+ K GDV+ V++K+K+ A ++E   LAE+   P ++SV+   M
Sbjct: 119 SHKAIVVNGQVVNIPSYQVKAGDVVSVREKAKKQARIVEGLALAEQGGFPSWVSVDSKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P   +       +   LVVEFYS+
Sbjct: 179 EGTFKSAPERSE---LSSDINEQLVVEFYSK 206


>gi|315225425|ref|ZP_07867239.1| 30S ribosomal protein S4 [Capnocytophaga ochracea F0287]
 gi|314944698|gb|EFS96733.1| 30S ribosomal protein S4 [Capnocytophaga ochracea F0287]
          Length = 201

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 89/207 (42%), Positives = 126/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    ++Y PG HG  RR++K S + +QL+ KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FERKNYPPGQHGLARRRAKRSEYAIQLQEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+F +++++A RS+  T   L+   ESRLD +VYR    PT  AARQ V+HR
Sbjct: 60  YTYG-ILEKQFHNLYEKAKRSKSITGEVLLQLCESRLDNVVYRMGIAPTRSAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK L+ + E S  A   V E+I+ N + M  TF
Sbjct: 119 HITVNGNIVNIPSYSLKPGDVVGVREKSKSLSVI-ENSLAAHSAVYEWITWNPEKMEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     +  P  ++  L+VE YS+
Sbjct: 178 VAVPQR---IQIPENIKEQLIVELYSK 201


>gi|294501546|ref|YP_003565246.1| ribosomal protein S4 [Bacillus megaterium QM B1551]
 gi|295706894|ref|YP_003599969.1| 30S ribosomal protein S4 [Bacillus megaterium DSM 319]
 gi|294351483|gb|ADE71812.1| ribosomal protein S4 [Bacillus megaterium QM B1551]
 gi|294804553|gb|ADF41619.1| 30S ribosomal protein S4 [Bacillus megaterium DSM 319]
          Length = 200

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKISRRLGLSLSGTGKE-LEKRPYAPGPHGPGQRKKISEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F  A +  G    N +  LE+RLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VTERQFRNLFVAAGKLTGKHGENFMILLEARLDNLVYRMGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV+G+ V+I SYR + G VI V++KS+ L+ V EA ++    VP+Y++V+ + +  TF 
Sbjct: 119 VLVDGKRVDIPSYRVQPGQVIGVREKSRNLSIVKEALEV-NNFVPDYLTVDAEKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   L+VEFYSR
Sbjct: 178 RLPERSE---LSAEINEALIVEFYSR 200


>gi|320451274|ref|YP_004203370.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01]
 gi|320151443|gb|ADW22821.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01]
          Length = 209

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +      PK  +  R Y PG HGQ+R  +PS + ++LR 
Sbjct: 1   MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRTRRPSDYAVRLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG ISE +FR++F+EA R +G T    +  LESRLD +VYR  F  +   ARQ
Sbjct: 61  KQKLRRIYG-ISETQFRNLFEEASRKKGVTGTVFLGLLESRLDNVVYRLGFAASRRQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+ VNGR V++ +YR K GD I + + S+ LA + E  + +  R V  ++S++ +
Sbjct: 120 MVRHGHITVNGRRVDLPAYRVKPGDEIAIAEGSRNLAFIRENLEAMKGRKVGPWLSLDVE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F+R+P   +D+  PV     LVVEFYSR
Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVVEFYSR 209


>gi|256820007|ref|YP_003141286.1| 30S ribosomal protein S4 [Capnocytophaga ochracea DSM 7271]
 gi|256581590|gb|ACU92725.1| ribosomal protein S4 [Capnocytophaga ochracea DSM 7271]
          Length = 201

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    ++Y PG HG  RR++K S + +QL+ KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FERKNYPPGQHGLARRRAKRSEYAIQLQEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+F +++++A RS+  T   L+   ESRLD +VYR    PT  AARQ V+HR
Sbjct: 60  YTYG-ILEKQFHNLYEKAKRSKSITGEVLLQLCESRLDNVVYRMGIAPTRSAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK L+ + E S  A   V E+I+ N + +  TF
Sbjct: 119 HITVNGNIVNIPSYSLKPGDVVGVREKSKSLSVI-ENSLAAHSAVYEWITWNPEKLEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     +  P  ++  L+VE YS+
Sbjct: 178 VAVPQR---IQIPENIKEQLIVELYSK 201


>gi|83648828|ref|YP_437263.1| ribosomal protein S4 [Hahella chejuensis KCTC 2396]
 gi|123530606|sp|Q2S936|RS4_HAHCH RecName: Full=30S ribosomal protein S4
 gi|83636871|gb|ABC32838.1| ribosomal protein S4 [Hahella chejuensis KCTC 2396]
          Length = 206

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HGQ R+ + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGARALDSKCNMETAPGQHGQ-RRGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARIKGATGENLLQLLERRLDNVVYRMGFGSTRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ +LVNG++VNI SY+ K GDV+ +++KSK    +  + +L A+R   E+I V+   M
Sbjct: 119 SHKAILVNGKAVNIPSYQVKPGDVVSIREKSKNQLRIKGSLELAAQRATLEWIEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P      P    +  NL+VE YS+
Sbjct: 179 SGTFKSVPERTDLSP---DINENLIVELYSK 206


>gi|92117193|ref|YP_576922.1| 30S ribosomal protein S4 [Nitrobacter hamburgensis X14]
 gi|122418035|sp|Q1QMT5|RS4_NITHX RecName: Full=30S ribosomal protein S4
 gi|91800087|gb|ABE62462.1| SSU ribosomal protein S4P [Nitrobacter hamburgensis X14]
          Length = 205

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 138/206 (66%), Positives = 165/206 (80%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  +K+KIDRR+G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +ISE++F +I+ EA R +GD+  NLI  LE RLDT+VYRAKFVPT+FAARQF+NH H
Sbjct: 61  YYANISERQFYAIYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVPTMFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SY+ K GD IEVK  SKQLA VLEA+QLAERDVP++I  +H+   A FV
Sbjct: 121 VKVNGRRVNIPSYKLKVGDAIEVKDASKQLALVLEANQLAERDVPDFIDADHNKQTAKFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP  L DVP+ V M+P+L+VEFYSR
Sbjct: 181 RIPH-LADVPFAVQMEPHLIVEFYSR 205


>gi|315127932|ref|YP_004069935.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913]
 gi|315016446|gb|ADT69784.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913]
 gi|332037269|gb|EGI73724.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis ANT/505]
          Length = 206

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNGR VNI SY     D + +++KSK  A ++ A +LAE R+ P ++ V+   +
Sbjct: 119 SHKAILVNGRVVNIPSYVITPEDTVVIREKSKTQARIIAALELAEQREKPTWVEVDGKKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +F R+P           +   L+VE YS+
Sbjct: 179 EGSFKRLPERSD---LSADINEQLIVELYSK 206


>gi|56421337|ref|YP_148655.1| 30S ribosomal protein S4 [Geobacillus kaustophilus HTA426]
 gi|61215360|sp|Q5KW49|RS4_GEOKA RecName: Full=30S ribosomal protein S4
 gi|56381179|dbj|BAD77087.1| 30S ribosomal protein S4 [Geobacillus kaustophilus HTA426]
          Length = 200

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F+EA +  G    N +  LESRLD +VYR     T   ARQ V H H
Sbjct: 60  MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  VNI SYR K G  I V++KS+ L  + EA + A   +P+Y++ N + M  T+ 
Sbjct: 119 ILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLTFNPEKMEGTYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|85373950|ref|YP_458012.1| 30S ribosomal protein S4 [Erythrobacter litoralis HTCC2594]
 gi|122544575|sp|Q2NAS6|RS4_ERYLH RecName: Full=30S ribosomal protein S4
 gi|84787033|gb|ABC63215.1| ribosomal protein S4 [Erythrobacter litoralis HTCC2594]
          Length = 204

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 129/206 (62%), Positives = 160/206 (77%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRK K S FGLQLRAKQK+K 
Sbjct: 1   MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKGKTSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR  + EA R +GDT  NLI  LE RLD +VYRAKF PT+FAARQ VNH H
Sbjct: 61  YYGDVTEKQFRRTYAEASRMKGDTGQNLIGLLEQRLDMVVYRAKFAPTVFAARQIVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S R K GDVI +  K+K++A V+EA  L ER++P+Y++ + ++   TF 
Sbjct: 121 IYVNGVKTNIPSARVKVGDVISLGNKAKEMALVIEAQSLPEREIPDYVAPDGND-KVTFT 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVP-KLDEVPYPVTMEPNLVVEFYSR 204


>gi|298372562|ref|ZP_06982552.1| ribosomal protein S4 [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275466|gb|EFI17017.1| ribosomal protein S4 [Bacteroidetes oral taxon 274 str. F0058]
          Length = 202

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE L+G  K  ++ +++ PG HGQ R  K S +  QLR KQK K 
Sbjct: 1   MARYIGPKSKISRKFGEPLFGSDK-VLSRKNFPPGQHGQARSRKKSEYAKQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F +A R +G T   LI  LE RLD +VYR    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFVKAQRQKGITGAILIQLLECRLDNVVYRLGMAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNG  +NI SY  K+GD+I V++K K +  + EA          ++  + + M   F+
Sbjct: 119 IIVNGEVLNIPSYIVKQGDIIGVREKDKSMIVITEALAGHNHSKYPWLEWDKNLMAGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  +Q  L+VE YS+
Sbjct: 179 HIPER---EDIPENIQEQLIVELYSK 201


>gi|148554062|ref|YP_001261644.1| 30S ribosomal protein S4 [Sphingomonas wittichii RW1]
 gi|172048096|sp|A5V5E0|RS4_SPHWW RecName: Full=30S ribosomal protein S4
 gi|148499252|gb|ABQ67506.1| SSU ribosomal protein S4P [Sphingomonas wittichii RW1]
          Length = 204

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 129/206 (62%), Positives = 160/206 (77%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QL+AKQK+K 
Sbjct: 1   MSKRTSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+  + EA R +GDTS NLI  LE RLD +VYRAKF PTIFAARQ V+H H
Sbjct: 61  YYGDVTEKQFKRNYTEASRMKGDTSQNLIGLLERRLDAVVYRAKFAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S + K GD I +  K++++A VLEA  L+ERDVPEYI+ +      TFV
Sbjct: 121 IRVNGVKCNIASRQVKPGDEISLGSKAQEMALVLEAQGLSERDVPEYIAQDGGA-KVTFV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVPT-LDEVPYPVKMEPNLVVEFYSR 204


>gi|312795803|ref|YP_004028725.1| SSU ribosomal protein S4P [Burkholderia rhizoxinica HKI 454]
 gi|312167578|emb|CBW74581.1| SSU ribosomal protein S4P [Burkholderia rhizoxinica HKI 454]
          Length = 207

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +GLQLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLDT+VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDTVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNH 172
           Q V+H+ + VNG+  NI S + K GDV+ V++++K+   + EA  LAE  + P ++SV+ 
Sbjct: 117 QLVSHKAITVNGQVANIPSLQVKAGDVVAVREQAKKQTRIQEALSLAEQNNFPGWVSVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF  +P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKHVPERSD---IAGDINESLIVELYSR 207


>gi|77361711|ref|YP_341286.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis TAC125]
 gi|90101708|sp|Q3IJJ5|RS4_PSEHT RecName: Full=30S ribosomal protein S4
 gi|76876622|emb|CAI87844.1| 30S ribosomal subunit protein S4 [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 206

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNGR VN+ SY     D + +++KSK  A ++ A +LAE R+ P ++ V+   +
Sbjct: 119 SHKAILVNGRVVNVPSYVIAPEDTVVIREKSKTQARIIAALELAEQREKPTWVEVDGKKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +F R+P           +   L+VE YS+
Sbjct: 179 EGSFKRLPERSD---LSADINEQLIVELYSK 206


>gi|224827041|ref|ZP_03700138.1| ribosomal protein S4 [Lutiella nitroferrum 2002]
 gi|224600707|gb|EEG06893.1| ribosomal protein S4 [Lutiella nitroferrum 2002]
          Length = 206

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  RKS+ S +G+QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRALDSKCKLDSIPGQHGA-RKSRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ F EA R +G T  NL+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRNYFAEASRLKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI S++ K GDV+ +++K+K+ A ++E   LAE+   P ++SV+   M
Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVAIREKAKKQARIVEGLALAEQGGFPSWVSVDPKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F   P   +       +   LVVEFYS+
Sbjct: 179 EGVFKSAPERSE---LAGDINEQLVVEFYSK 206


>gi|251793850|ref|YP_003008582.1| 30S ribosomal protein S4 [Aggregatibacter aphrophilus NJ8700]
 gi|247535249|gb|ACS98495.1| ribosomal protein S4 [Aggregatibacter aphrophilus NJ8700]
          Length = 206

 Score =  221 bits (563), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|52426079|ref|YP_089216.1| 30S ribosomal protein S4 [Mannheimia succiniciproducens MBEL55E]
 gi|61215476|sp|Q65QX9|RS4_MANSM RecName: Full=30S ribosomal protein S4
 gi|52308131|gb|AAU38631.1| RpsD protein [Mannheimia succiniciproducens MBEL55E]
          Length = 206

 Score =  221 bits (563), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|94497376|ref|ZP_01303947.1| 30S ribosomal protein S4 [Sphingomonas sp. SKA58]
 gi|94423239|gb|EAT08269.1| 30S ribosomal protein S4 [Sphingomonas sp. SKA58]
          Length = 204

 Score =  221 bits (563), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 125/206 (60%), Positives = 158/206 (76%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRSSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI+EK+F+  + EA R +GDT  NLI  LE RLD +VYRAKF PTI++ARQ V+H H
Sbjct: 61  YYGDITEKQFKKNYVEAARMKGDTGQNLIGLLERRLDALVYRAKFAPTIWSARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S   K GD I + +K++++A VLEA  L ERD+P+Y+S +      T+V
Sbjct: 121 IYVNGVKCNIASRLVKPGDEITLGKKAQEMALVLEAQNLPERDIPDYVSPDGAA-KVTYV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVPT-LDEVPYPVKMEPNLVVEFYSR 204


>gi|229496321|ref|ZP_04390041.1| ribosomal protein S4 [Porphyromonas endodontalis ATCC 35406]
 gi|229316899|gb|EEN82812.1| ribosomal protein S4 [Porphyromonas endodontalis ATCC 35406]
          Length = 209

 Score =  221 bits (563), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR GE ++G  K  ++ ++Y PG HG+ R+ K S +G+QL  KQK K 
Sbjct: 9   MARYTGPKSKVARRFGEPIFGPDK-VLSKKNYPPGQHGEGRRRKSSEYGIQLAEKQKAKY 67

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++FK A RS+G T   L+  LE RLD IVYR    PT  AARQ V+HRH
Sbjct: 68  TYGVL-ERQFRNLFKAAQRSKGVTGEVLLQLLECRLDNIVYRLGIAPTRAAARQIVSHRH 126

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G +I V+++ K +  +  +          +I  ++ +M   F+
Sbjct: 127 ITVDGNVVNIPSYSVKPGQIIAVRERDKSMEVIANSLAGFNHGKYSWIEWDNSSMSGKFL 186

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++  L+VE YS+
Sbjct: 187 NIPQRAD---IPENIKEQLIVELYSK 209


>gi|304315968|ref|YP_003851113.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777470|gb|ADL68029.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 206

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  K+ RR G  L+ +       K P   R Y PG HGQ +K K + +G QLR 
Sbjct: 1   MARYTESTCKLCRREGMKLFLKGDKCYTEKCPFARRPYAPGQHGQNKK-KLTNYGTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++YYG + E++F   F+EA+R +G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKLRRYYGVL-ERQFERYFEEAERMKGITGDNLLQLLERRLDNVVYRLSIASSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
           FV H H+LVNG+ V+I SY  K GDVI VK  SK L  +    + A  ++P+++  N D+
Sbjct: 119 FVAHGHILVNGKKVDIPSYLVKAGDVISVKDSSKSLEVIKNNVE-ASTNIPDWLDFNKDS 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    + +P+  + +  PV  + +L+VE YSR
Sbjct: 178 LEGKVLSLPTR-EHIDLPV--EEHLIVELYSR 206


>gi|325577150|ref|ZP_08147634.1| 30S ribosomal protein S4 [Haemophilus parainfluenzae ATCC 33392]
 gi|325160732|gb|EGC72853.1| 30S ribosomal protein S4 [Haemophilus parainfluenzae ATCC 33392]
          Length = 206

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|144900824|emb|CAM77688.1| 30S ribosomal protein S4 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 205

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 124/207 (59%), Positives = 152/207 (73%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT-RSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M+KR  +K KI+RR+G NLWGR KSP+   +   PG HG RRK KPS FG QL AKQK+K
Sbjct: 1   MTKRIEAKFKINRRLGVNLWGRGKSPLARGKETPPGQHGARRK-KPSDFGTQLMAKQKLK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG+ISEK+FR ++ EA R RGDTS NLI  LE RLD +VYR K   + F ARQ +NH 
Sbjct: 60  GYYGNISEKQFRKLYDEAVRRRGDTSENLIGLLERRLDAVVYRMKMAVSPFQARQVINHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ +NI SY+ K+GD+I VKQKSK LA +LEA+Q  ERDVP+Y+ V+H  M  TF
Sbjct: 120 HIHVNGKRLNIASYQVKDGDIITVKQKSKDLAIILEAAQSPERDVPDYLEVDHKEMKGTF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +R P  L DVPYP  M+PNLV+EFYSR
Sbjct: 180 IRAP-KLSDVPYPCQMEPNLVIEFYSR 205


>gi|261880856|ref|ZP_06007283.1| 30S ribosomal protein S4 [Prevotella bergensis DSM 17361]
 gi|270332363|gb|EFA43149.1| 30S ribosomal protein S4 [Prevotella bergensis DSM 17361]
          Length = 201

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  +  R++ PG HG  R+ K S +G+QL  KQK K 
Sbjct: 1   MARYIGPKSRISRRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKQSEYGIQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F +A +S G T   L+  LE RLD +VYR    PT  AARQ V+H+H
Sbjct: 60  TYGVL-ERQFRNLFVKAAKSGGITGEVLLQLLECRLDNVVYRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G ++ V+++SK L ++  A          ++  +       F+
Sbjct: 119 ITVDGQVVNIPSYSVKAGQIVGVRERSKSLEAIDAALAGFNHSKYPWLEWDEHTKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HTPER---EDIPENIKEQLIVELYSK 201


>gi|261418186|ref|YP_003251868.1| 30S ribosomal protein S4 [Geobacillus sp. Y412MC61]
 gi|297529040|ref|YP_003670315.1| ribosomal protein S4 [Geobacillus sp. C56-T3]
 gi|319767854|ref|YP_004133355.1| ribosomal protein S4 [Geobacillus sp. Y412MC52]
 gi|261374643|gb|ACX77386.1| ribosomal protein S4 [Geobacillus sp. Y412MC61]
 gi|297252292|gb|ADI25738.1| ribosomal protein S4 [Geobacillus sp. C56-T3]
 gi|317112720|gb|ADU95212.1| ribosomal protein S4 [Geobacillus sp. Y412MC52]
          Length = 200

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPMWKVSRRLGISLSGTGKE-LQKRPYPPGQHGPGQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F+EA +  G    N +  LESRLD +VYR     T   ARQ V H H
Sbjct: 60  MYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  VNI SYR K G  I V++KS+ L  + EA + A   +P+Y++ N + M  T+ 
Sbjct: 119 ILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLTFNPEKMEGTYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|68249397|ref|YP_248509.1| 30S ribosomal protein S4 [Haemophilus influenzae 86-028NP]
 gi|145628304|ref|ZP_01784105.1| 30S ribosomal protein S4 [Haemophilus influenzae 22.1-21]
 gi|145630548|ref|ZP_01786328.1| 30S ribosomal protein S4 [Haemophilus influenzae R3021]
 gi|145632160|ref|ZP_01787895.1| 30S ribosomal protein S4 [Haemophilus influenzae 3655]
 gi|145634787|ref|ZP_01790495.1| 30S ribosomal protein S4 [Haemophilus influenzae PittAA]
 gi|145636640|ref|ZP_01792307.1| 30S ribosomal protein S4 [Haemophilus influenzae PittHH]
 gi|145638397|ref|ZP_01794007.1| 30S ribosomal protein S4 [Haemophilus influenzae PittII]
 gi|145640900|ref|ZP_01796482.1| 30S ribosomal protein S4 [Haemophilus influenzae R3021]
 gi|148826554|ref|YP_001291307.1| 30S ribosomal protein S4 [Haemophilus influenzae PittEE]
 gi|148827990|ref|YP_001292743.1| 30S ribosomal protein S4 [Haemophilus influenzae PittGG]
 gi|229844669|ref|ZP_04464808.1| 30S ribosomal protein S4 [Haemophilus influenzae 6P18H1]
 gi|229845852|ref|ZP_04465964.1| 30S ribosomal protein S4 [Haemophilus influenzae 7P49H1]
 gi|260581618|ref|ZP_05849415.1| ribosomal protein S4 [Haemophilus influenzae NT127]
 gi|319775264|ref|YP_004137752.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae F3047]
 gi|319897704|ref|YP_004135901.1| 30S ribosomal subunit protein s4 [Haemophilus influenzae F3031]
 gi|329122807|ref|ZP_08251379.1| 30S ribosomal protein S4 [Haemophilus aegyptius ATCC 11116]
 gi|81336176|sp|Q4QM98|RS4_HAEI8 RecName: Full=30S ribosomal protein S4
 gi|172048051|sp|A5UDS3|RS4_HAEIE RecName: Full=30S ribosomal protein S4
 gi|172048057|sp|A5UHV4|RS4_HAEIG RecName: Full=30S ribosomal protein S4
 gi|68057596|gb|AAX87849.1| 30S ribosomal protein S4 [Haemophilus influenzae 86-028NP]
 gi|144980079|gb|EDJ89738.1| 30S ribosomal protein S4 [Haemophilus influenzae 22.1-21]
 gi|144983938|gb|EDJ91380.1| 30S ribosomal protein S4 [Haemophilus influenzae R3021]
 gi|144987067|gb|EDJ93597.1| 30S ribosomal protein S4 [Haemophilus influenzae 3655]
 gi|145267953|gb|EDK07949.1| 30S ribosomal protein S4 [Haemophilus influenzae PittAA]
 gi|145270166|gb|EDK10102.1| 30S ribosomal protein S4 [Haemophilus influenzae PittHH]
 gi|145272726|gb|EDK12633.1| 30S ribosomal protein S4 [Haemophilus influenzae PittII]
 gi|145274414|gb|EDK14278.1| 30S ribosomal protein S4 [Haemophilus influenzae 22.4-21]
 gi|148716714|gb|ABQ98924.1| 30S ribosomal protein S4 [Haemophilus influenzae PittEE]
 gi|148719232|gb|ABR00360.1| 30S ribosomal protein S4 [Haemophilus influenzae PittGG]
 gi|229810856|gb|EEP46573.1| 30S ribosomal protein S4 [Haemophilus influenzae 7P49H1]
 gi|229812383|gb|EEP48073.1| 30S ribosomal protein S4 [Haemophilus influenzae 6P18H1]
 gi|260095211|gb|EEW79102.1| ribosomal protein S4 [Haemophilus influenzae NT127]
 gi|309751537|gb|ADO81521.1| 30S ribosomal protein S4 [Haemophilus influenzae R2866]
 gi|309973707|gb|ADO96908.1| 30S ribosomal protein S4 [Haemophilus influenzae R2846]
 gi|317433210|emb|CBY81585.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae F3031]
 gi|317449855|emb|CBY86066.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae F3047]
 gi|327472071|gb|EGF17509.1| 30S ribosomal protein S4 [Haemophilus aegyptius ATCC 11116]
          Length = 206

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ +++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAIREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|16272743|ref|NP_438961.1| 30S ribosomal protein S4 [Haemophilus influenzae Rd KW20]
 gi|260579893|ref|ZP_05847723.1| ribosomal protein S4 [Haemophilus influenzae RdAW]
 gi|1173260|sp|P44373|RS4_HAEIN RecName: Full=30S ribosomal protein S4
 gi|1573812|gb|AAC22460.1| ribosomal protein S4 (rpS4) [Haemophilus influenzae Rd KW20]
 gi|260093177|gb|EEW77110.1| ribosomal protein S4 [Haemophilus influenzae RdAW]
 gi|301169520|emb|CBW29121.1| 30S ribosomal subunit protein S4 [Haemophilus influenzae 10810]
          Length = 206

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFATTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ +++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAIREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|52081461|ref|YP_080252.1| 30S ribosomal protein S4 [Bacillus licheniformis ATCC 14580]
 gi|52786836|ref|YP_092665.1| 30S ribosomal protein S4 [Bacillus licheniformis ATCC 14580]
 gi|319647367|ref|ZP_08001589.1| 30S ribosomal protein S4 [Bacillus sp. BT1B_CT2]
 gi|81690928|sp|Q65G42|RS4_BACLD RecName: Full=30S ribosomal protein S4
 gi|52004672|gb|AAU24614.1| ribosomal protein S4 [Bacillus licheniformis ATCC 14580]
 gi|52349338|gb|AAU41972.1| RpsD [Bacillus licheniformis ATCC 14580]
 gi|317390714|gb|EFV71519.1| 30S ribosomal protein S4 [Bacillus sp. BT1B_CT2]
          Length = 200

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  LESRLD IVYR     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRNLFDKAAKMAGKHGENFMILLESRLDNIVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV+G  V+I SY+ K G  I +++KS+ L+ V EA ++    VPEY++ + + +  +  
Sbjct: 119 VLVDGSRVDIPSYQVKPGQTISLREKSQNLSVVKEAVEV-NNFVPEYLTFDAEKLEGSLT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEINEALIVEFYSR 200


>gi|15603256|ref|NP_246330.1| 30S ribosomal protein S4 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|26399488|sp|Q9CL53|RS4_PASMU RecName: Full=30S ribosomal protein S4
 gi|12721766|gb|AAK03475.1| RpS4 [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 206

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|330814238|ref|YP_004358477.1| SSU ribosomal protein S4p (S9e) [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487333|gb|AEA81738.1| SSU ribosomal protein S4p (S9e) [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 206

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 118/207 (57%), Positives = 162/207 (78%), Gaps = 2/207 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           M+KR  +KHK+DRR+G NLWGRPKSP NTR++GPG HGQ R + KPS + +QL+AKQK+K
Sbjct: 1   MTKRIQAKHKVDRRLGVNLWGRPKSPFNTRAFGPGQHGQTRARGKPSDYKIQLQAKQKLK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG+++E++FR++F+EA+R RG+T  NL+  LESRLD +VYRAKF  T+F ARQ +NH 
Sbjct: 61  GYYGNLNERQFRNVFQEAERVRGNTGENLVGILESRLDAVVYRAKFALTVFQARQIINHG 120

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ VN+GSY  KE D IEV+  SKQL ++L +    ER+VPEY+ V+H  + A +
Sbjct: 121 HIKVNGKKVNVGSYSLKENDEIEVRDSSKQLTTILSSVASKEREVPEYVVVDHKQLTAKY 180

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P  ++++PYP IM+PNLVVE+YSR
Sbjct: 181 TRVP-KMEEIPYPAIMEPNLVVEYYSR 206


>gi|120609325|ref|YP_969003.1| 30S ribosomal protein S4 [Acidovorax citrulli AAC00-1]
 gi|152060922|sp|A1TJU1|RS4_ACIAC RecName: Full=30S ribosomal protein S4
 gi|120587789|gb|ABM31229.1| SSU ribosomal protein S4P [Acidovorax citrulli AAC00-1]
          Length = 207

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 134/214 (62%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S FGLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ ADR +G+T  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAADRRKGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GDV+ V++KSK+ A ++EA QLA++  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKPGDVVAVREKSKKQARIVEALQLAQQVGIPAWVEVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D +  TF + P   +   +   +  +L+VE YSR
Sbjct: 177 DKVEGTFKKAPDRDE---FGADINESLIVELYSR 207


>gi|307292704|ref|ZP_07572550.1| ribosomal protein S4 [Sphingobium chlorophenolicum L-1]
 gi|306880770|gb|EFN11986.1| ribosomal protein S4 [Sphingobium chlorophenolicum L-1]
          Length = 204

 Score =  220 bits (562), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 127/206 (61%), Positives = 158/206 (76%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRSSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI+EK+F+  + EA R +GDT  NLI  LE RLD +VYRAKF PTIF+ARQ V+H H
Sbjct: 61  YYGDITEKQFKKSYIEAARMKGDTGQNLIGLLERRLDAVVYRAKFAPTIFSARQIVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S   K GD I + +K++++A VLEA  L ERD+P+Y+S +      T+V
Sbjct: 121 IYVNGVKCNIASRLVKPGDEITLGKKAQEMALVLEAQSLPERDIPDYVSPDGAA-KITYV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+PS L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVPS-LDEVPYPVKMEPNLVVEFYSR 204


>gi|103486278|ref|YP_615839.1| 30S ribosomal protein S4 [Sphingopyxis alaskensis RB2256]
 gi|123380035|sp|Q1GV16|RS4_SPHAL RecName: Full=30S ribosomal protein S4
 gi|98976355|gb|ABF52506.1| SSU ribosomal protein S4P [Sphingopyxis alaskensis RB2256]
          Length = 203

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 129/206 (62%), Positives = 160/206 (77%), Gaps = 3/206 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1   MSKRQSAKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI+EK+F+  + EA R +GDT  NLI  LE RLD +VYRAKF PTIF+ARQ V+H H
Sbjct: 61  YYGDITEKQFKKNYIEASRMKGDTGQNLIGLLERRLDAVVYRAKFTPTIFSARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG   NI S   K GD I + +K++++A V EA  L ERD+PEY++V+     AT+V
Sbjct: 121 VYVNGVKCNIASRLVKPGDEITLGKKAQEMALVAEAQSLPERDLPEYLAVDGTK--ATYV 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VPYPV M+PNLVVEFYSR
Sbjct: 179 RVPT-LDEVPYPVKMEPNLVVEFYSR 203


>gi|290477169|ref|YP_003470084.1| 30S ribosomal subunit protein S4 [Xenorhabdus bovienii SS-2004]
 gi|289176517|emb|CBJ83326.1| 30S ribosomal subunit protein S4 [Xenorhabdus bovienii SS-2004]
          Length = 206

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRTYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAESRQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNG  VNI SY+    DV+ V++K+K+ A +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGCVVNIASYQVSPNDVVSVREKAKKQARIKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|284006139|emb|CBA71381.1| 30S ribosomal protein S4 [Arsenophonus nasoniae]
          Length = 206

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD  VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLNLLEGRLDNTVYRMGFGATRAEARQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNG+ VNI SY+    DVI V++K+K+ + +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGQVVNIASYQVSPNDVISVREKAKKQSRIKAALELAEQREKPSWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERAD---LSADINEHLIVELYSK 206


>gi|293393288|ref|ZP_06637602.1| 30S ribosomal protein S4 [Serratia odorifera DSM 4582]
 gi|291424198|gb|EFE97413.1| 30S ribosomal protein S4 [Serratia odorifera DSM 4582]
          Length = 206

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKGIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|56552262|ref|YP_163101.1| 30S ribosomal protein S4 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761673|ref|ZP_04759760.1| RNA-binding S4 domain protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260754038|ref|YP_003226931.1| 30S ribosomal protein S4 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|7388203|sp|Q9Z5U7|RS4_ZYMMO RecName: Full=30S ribosomal protein S4
 gi|4378846|gb|AAD19714.1| 30S ribosomal protein S4 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543836|gb|AAV89990.1| RNA-binding S4 domain protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241373981|gb|EER63514.1| RNA-binding S4 domain protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258553401|gb|ACV76347.1| ribosomal protein S4 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 204

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 131/206 (63%), Positives = 160/206 (77%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR SSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRR+SK S +GLQL+AKQK+K 
Sbjct: 1   MSKRHSSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRRSKISDYGLQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FR  + +A + +GDTS NLI  LE RLD IVYRAKF PTIFAARQ V+H H
Sbjct: 61  YYGDVTEKQFRRSYDDASKLKGDTSQNLIGILERRLDMIVYRAKFAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S R   GD I +  K++++A VLEA  LAERD+P+Y+  + +    TFV
Sbjct: 121 IRVNGVKCNIASRRVNPGDEISLGSKAQEMALVLEAQSLAERDIPDYVLPDGNT-KVTFV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+ L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RIPT-LDEVPYPVKMEPNLVVEFYSR 204


>gi|323527577|ref|YP_004229730.1| 30S ribosomal protein S4 [Burkholderia sp. CCGE1001]
 gi|323384579|gb|ADX56670.1| ribosomal protein S4 [Burkholderia sp. CCGE1001]
          Length = 207

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ ++VNG   NI S + K GDV+ V+++SK+ A +LEA  LAE+  +P ++SV+ 
Sbjct: 117 QLVSHKAIMVNGVVSNIPSMQVKAGDVVAVREQSKKQARILEALSLAEQGGMPSWVSVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF + P   +       +  +L+VE YSR
Sbjct: 177 KKFEGTFKQKPERSE---IAGDINESLIVELYSR 207


>gi|238025957|ref|YP_002910188.1| 30S ribosomal protein S4 [Burkholderia glumae BGR1]
 gi|237875151|gb|ACR27484.1| 30S ribosomal protein S4 [Burkholderia glumae BGR1]
          Length = 207

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 82/214 (38%), Positives = 128/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG + NI S + K GDVI +++KSK+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGVASNIPSLQVKPGDVIAIREKSKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P   +       +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAE---IAGDINESLIVELYSR 207


>gi|254418524|ref|ZP_05032248.1| ribosomal protein S4 [Brevundimonas sp. BAL3]
 gi|196184701|gb|EDX79677.1| ribosomal protein S4 [Brevundimonas sp. BAL3]
          Length = 205

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 133/204 (65%), Positives = 164/204 (80%), Gaps = 1/204 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+KIDR +GENLWGR KSPVN RSYGPG HGQRRKSK S FGLQL+AKQK+K 
Sbjct: 1   MSKRHSAKYKIDRAMGENLWGRAKSPVNKRSYGPGQHGQRRKSKVSDFGLQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+F   + EA R +G+TS NLI  LESRLD IVYRAKFVPT++AARQFV+H H
Sbjct: 61  YYGNITEKQFAKTYDEAARRKGNTSENLIGLLESRLDAIVYRAKFVPTVWAARQFVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG+ V+I SYR K  DV+ VK+KS+ +A V+EA Q +ERDVP+Y+ ++  +    +V
Sbjct: 121 VLVNGKKVDISSYRVKPEDVVTVKEKSRNMALVIEAQQSSERDVPDYLELSDRSFSVRYV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R+P  L DVPYPV M+PNLVVE+Y
Sbjct: 181 RVPE-LTDVPYPVKMEPNLVVEYY 203


>gi|85708538|ref|ZP_01039604.1| 30S ribosomal protein S4 [Erythrobacter sp. NAP1]
 gi|85690072|gb|EAQ30075.1| 30S ribosomal protein S4 [Erythrobacter sp. NAP1]
          Length = 204

 Score =  220 bits (561), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 131/206 (63%), Positives = 162/206 (78%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRKSK S FGLQLRAKQK+K 
Sbjct: 1   MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKSKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+FRS +K+A R +GDT  NLI  LE RLD IVYRAKF PTIFAARQ V+H H
Sbjct: 61  YYGDVTEKQFRSTYKDATRMKGDTGQNLIGLLERRLDMIVYRAKFAPTIFAARQIVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S RC  GDVI +  K+K++A V+EA  L ER++P+Y++ + ++    F 
Sbjct: 121 IYVNGVKCNIASRRCDVGDVISLGNKAKEMALVIEAQSLPEREIPDYVAPDGND-KVQFT 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVP-KLDEVPYPVTMEPNLVVEFYSR 204


>gi|301155354|emb|CBW14820.1| 30S ribosomal subunit protein S4 [Haemophilus parainfluenzae T3T1]
          Length = 206

 Score =  220 bits (561), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDIAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|315633478|ref|ZP_07888768.1| 30S ribosomal protein S4 [Aggregatibacter segnis ATCC 33393]
 gi|315477520|gb|EFU68262.1| 30S ribosomal protein S4 [Aggregatibacter segnis ATCC 33393]
          Length = 206

 Score =  220 bits (561), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DVI V++KSK+ A +  + +LAE ++ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVISVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|152978165|ref|YP_001343794.1| 30S ribosomal protein S4 [Actinobacillus succinogenes 130Z]
 gi|171704198|sp|A6VLL2|RS4_ACTSZ RecName: Full=30S ribosomal protein S4
 gi|150839888|gb|ABR73859.1| ribosomal protein S4 [Actinobacillus succinogenes 130Z]
          Length = 206

 Score =  220 bits (561), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ +++KSK+ A +  + +LAE ++ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAIREKSKKQARIKASLELAEQKEKPTWLEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|326315414|ref|YP_004233086.1| 30S ribosomal protein S4 [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372250|gb|ADX44519.1| ribosomal protein S4 [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 207

 Score =  220 bits (561), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 89/214 (41%), Positives = 134/214 (62%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S FGLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ ADR +G+T  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAADRRKGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GD++ V++KSK+ A ++EA QLA++  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKPGDIVAVREKSKKQARIVEALQLAQQVGIPAWVEVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D +  TF + P   +   +   +  +L+VE YSR
Sbjct: 177 DKVEGTFKKAPDRDE---FGADINESLIVELYSR 207


>gi|71083832|ref|YP_266552.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1062]
 gi|91763131|ref|ZP_01265095.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1002]
 gi|90101703|sp|Q4FLJ0|RS4_PELUB RecName: Full=30S ribosomal protein S4
 gi|71062945|gb|AAZ21948.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717544|gb|EAS84195.1| 30S ribosomal protein S4 [Candidatus Pelagibacter ubique HTCC1002]
          Length = 205

 Score =  220 bits (561), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 125/206 (60%), Positives = 159/206 (77%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR S+KHKIDRR+  NLWGRPKSP N R YGPG HGQ RK KPS +G+QL+AKQK+K 
Sbjct: 1   MTKRISAKHKIDRRLKINLWGRPKSPFNKRDYGPGQHGQGRKGKPSDYGIQLQAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+E++FR+I+K+A   +GDT  NLI  LE RLD++VYRA+F  T+F+ARQ +NH H
Sbjct: 61  YYGNINERQFRNIYKKATMLKGDTGENLIGLLERRLDSVVYRARFSTTVFSARQLINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNIGSY  KE D+IE++ KSKQLA +  A    ER+ PEYI+++  N   TFV
Sbjct: 121 VRVNGKKVNIGSYVVKEEDIIEIRDKSKQLAIIDIALASKERETPEYINLDEKNKKVTFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P    +VPYPVIM+PNLV+E+YSR
Sbjct: 181 RTP-KFDEVPYPVIMEPNLVIEYYSR 205


>gi|237806899|ref|YP_002891339.1| 30S ribosomal protein S4 [Tolumonas auensis DSM 9187]
 gi|259495302|sp|C4L7V4|RS4_TOLAT RecName: Full=30S ribosomal protein S4
 gi|237499160|gb|ACQ91753.1| ribosomal protein S4 [Tolumonas auensis DSM 9187]
          Length = 206

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I EK+FR+ ++EA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILEKQFRNYYREATRLKGNTGENLLQLLEGRLDNVVYRMGFATTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ ++VNG+ VNI S +    DV+ V++K+K+ A +  A  L A+R+ P +I +N D M
Sbjct: 119 SHKAIVVNGKVVNIPSSQVSPEDVVTVREKAKKQARIKAALDLAAQREKPTWIEINADKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + R+P           +   L+VE YS+
Sbjct: 179 EGVYKRLPERSD---LSADINEQLIVELYSK 206


>gi|330432100|gb|AEC17159.1| 30S ribosomal protein S4 [Gallibacterium anatis UMN179]
          Length = 206

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DVI V++KSK+ A +  + +LAE ++ P ++ V+   M
Sbjct: 119 SHKAIIVNGRVVNIPSFQVSVDDVIAVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|307731230|ref|YP_003908454.1| 30S ribosomal protein S4 [Burkholderia sp. CCGE1003]
 gi|307585765|gb|ADN59163.1| ribosomal protein S4 [Burkholderia sp. CCGE1003]
          Length = 207

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ ++VNG   NI S + K GDV+ V+++SK+ A +LEA  LAE+  +P ++SV+ 
Sbjct: 117 QLVSHKAIMVNGVVSNIPSMQVKAGDVVAVREQSKKQARILEALSLAEQGGMPSWVSVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF + P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207


>gi|323706478|ref|ZP_08118039.1| ribosomal protein S4 [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534198|gb|EGB23988.1| ribosomal protein S4 [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 206

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 123/212 (58%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  K+ RR G  L+ +       K P   R Y PG HGQ +K K + +G QLR 
Sbjct: 1   MARYTESTCKLCRREGMKLFLKGDKCYTEKCPFARRPYAPGQHGQNKK-KLTNYGTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++YYG + E++F   F+EA+R +G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKLRRYYGVL-ERQFERYFEEAERMKGITGDNLLQLLERRLDNVVYRLSIASSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
           FV+H H+LVNG+ V+I SY  K GDV+ VK  SK L  +    + A  ++P+++  N D+
Sbjct: 119 FVSHGHILVNGKKVDIPSYLVKAGDVVSVKDSSKSLDVIKNNVE-ASTNIPDWLDFNRDS 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    + +P+        + ++ +L+VE YSR
Sbjct: 178 LEGKVLSLPTR---EHIDLPIEEHLIVELYSR 206


>gi|302384228|ref|YP_003820051.1| ribosomal protein S4 [Brevundimonas subvibrioides ATCC 15264]
 gi|302194856|gb|ADL02428.1| ribosomal protein S4 [Brevundimonas subvibrioides ATCC 15264]
          Length = 205

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 131/205 (63%), Positives = 157/205 (76%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+KIDR +GENLWGR KSPVN RSYGPG HGQRRKSK S FGLQL+AKQK+K 
Sbjct: 1   MSKRHSAKYKIDRAMGENLWGRAKSPVNKRSYGPGQHGQRRKSKVSDFGLQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +++EK+FR  + EA R +G+TS  LI  LE+RLD  VYRAKFVPT +AARQFVNH H
Sbjct: 61  YYANLTEKQFRKTYDEAARRKGNTSETLIGLLEARLDATVYRAKFVPTPWAARQFVNHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI SY  K GDV+EVK+KS+ +A VLEA Q  ERD+P+Y+ +        FV
Sbjct: 121 VTVNGKKVNIASYTLKPGDVVEVKEKSRNMALVLEAQQSGERDIPDYLELGDRGFSVRFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R P  L DVP+ V M+PNLVVE+YS
Sbjct: 181 RFPE-LADVPFAVKMEPNLVVEYYS 204


>gi|88861470|ref|ZP_01136096.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2]
 gi|88816518|gb|EAR26347.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2]
          Length = 206

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARIKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNG  VNI SYR    DV+ +++K+K+ A ++ A +LAE R+ P ++ V+   M
Sbjct: 119 SHKSVMVNGSVVNIPSYRITADDVVVIREKAKKQARIVAALELAEQREKPTWVEVDGSKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGVFKRLPERSD---LSADINEQLIVELYSK 206


>gi|197287092|ref|YP_002152964.1| 30S ribosomal protein S4 [Proteus mirabilis HI4320]
 gi|227354912|ref|ZP_03839326.1| 30S ribosomal protein S4 [Proteus mirabilis ATCC 29906]
 gi|226699106|sp|B4F1K8|RS4_PROMH RecName: Full=30S ribosomal protein S4
 gi|194684579|emb|CAR46428.1| 30S ribosomal protein S4 [Proteus mirabilis HI4320]
 gi|227164994|gb|EEI49833.1| 30S ribosomal protein S4 [Proteus mirabilis ATCC 29906]
          Length = 206

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAEARQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ V++KSK+ + +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|297172490|gb|ADI23462.1| hypothetical protein [uncultured nuHF1 cluster bacterium
           HF0770_35I22]
          Length = 204

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 126/206 (61%), Positives = 162/206 (78%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR  +K+KI+RR+G NLWGRPKSPVN R Y PG  GQRR+ KPS +GLQL AKQK+K 
Sbjct: 1   MSKRIKAKYKINRRLGVNLWGRPKSPVNIREYPPGEQGQRRR-KPSDYGLQLMAKQKLKG 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+FR  ++EA + RGDTS NL+  LE RLD+++YR KFVPT+F+ARQFVNH H
Sbjct: 60  YYGNITEKQFRKYYQEATKRRGDTSENLVGILERRLDSVIYRMKFVPTVFSARQFVNHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNGR+VNI SY  K  D+I V++KS+Q+  VL A +  ERDVPEY++VN   M  TF+
Sbjct: 120 IMVNGRTVNIPSYVVKVDDIISVREKSRQMPLVLLAMESPERDVPEYLTVNPSKMEGTFL 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +PS  + +PYPV M+PNLV+EFYSR
Sbjct: 180 HVPSLAE-IPYPVQMEPNLVIEFYSR 204


>gi|86141165|ref|ZP_01059711.1| 30S ribosomal protein S4 [Leeuwenhoekiella blandensis MED217]
 gi|85831724|gb|EAQ50179.1| 30S ribosomal protein S4 [Leeuwenhoekiella blandensis MED217]
          Length = 201

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 86/207 (41%), Positives = 125/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL+ KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLQEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E +FR++F++A  + G T   L+   ESRLD +V+R    P+  AARQ V+HR
Sbjct: 60  YTYG-ILENQFRNMFEKATSATGITGVVLLQLCESRLDNVVFRMGIAPSRRAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY+ K GDV+ V++KSK L+++ ++   A   V E+IS N+D+   TF
Sbjct: 119 HITVNGELVNIPSYQLKAGDVVAVREKSKSLSAIQDSLANASH-VYEWISWNNDSKQGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     +  P  +    +VE YS+
Sbjct: 178 VSVPER---IQIPENINEQFIVELYSK 201


>gi|319892767|ref|YP_004149642.1| SSU ribosomal protein S4p (S9e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162463|gb|ADV06006.1| SSU ribosomal protein S4p (S9e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464199|gb|ADX76352.1| ribosomal protein S4 [Staphylococcus pseudintermedius ED99]
          Length = 200

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  ++ R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSSWKKSRRLGISLSGTGKE-LDKRPYAPGQHGPTQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F+ A +  G    N +  L SRLD IVY      T   ARQ V H H
Sbjct: 60  LYG-MTERQFRNTFQTAGKQGGVHGENFMILLASRLDAIVYALGLARTRRQARQLVGHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V V+G+ V+I SY  K G V+ V++KS++LA + E+ ++    VP+Y+  + DN+  TFV
Sbjct: 119 VEVDGKRVDIPSYTLKPGQVVTVREKSRKLAIIEESVEI-NNFVPDYLDFDADNLTGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200


>gi|149371654|ref|ZP_01891070.1| 30S ribosomal protein S4 [unidentified eubacterium SCB49]
 gi|149355281|gb|EDM43841.1| 30S ribosomal protein S4 [unidentified eubacterium SCB49]
          Length = 201

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIYGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLAEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR++FK+A  + G T   L+   ESRLD +VYR    P+  AARQ V+HR
Sbjct: 60  YTYG-ILEKQFRNLFKKATAAPGITGQVLLQLCESRLDNVVYRMGIAPSRPAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY+ K GDV+ V++KSK L ++ ++   +  +V E+I+ N +    TF
Sbjct: 119 HITVNGEKVNIPSYQLKAGDVVAVREKSKSLEAIQDSLANSS-NVYEWITWNSETKQGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V IP  L+    P  +    +VE YS+
Sbjct: 178 VTIPQRLQ---IPENINEQFIVELYSK 201


>gi|260914657|ref|ZP_05921123.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325]
 gi|260631256|gb|EEX49441.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325]
          Length = 206

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|293390661|ref|ZP_06634995.1| ribosomal protein S4 [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951195|gb|EFE01314.1| ribosomal protein S4 [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 206

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    D++ V++KSK+ A +  + +LAE ++ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDLVAVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|254483410|ref|ZP_05096639.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2148]
 gi|214036284|gb|EEB76962.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2148]
          Length = 206

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCKAEAIPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
            H+ ++VNG+ VNI SY+ K GDV+ +++K+K+   V  A  L A+R  PE+I VN D +
Sbjct: 119 AHKSIMVNGQVVNIASYQVKAGDVVALREKAKKQLRVQSALALAAQRGEPEWIEVNADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P           +  NL+VE YS+
Sbjct: 179 EGTFKSVPDRQD---LSSEINENLIVELYSK 206


>gi|291280122|ref|YP_003496957.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1]
 gi|290754824|dbj|BAI81201.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1]
          Length = 208

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +       K     + Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MARYTGPVCKLCRREGMKLYLKGERCFKDKCAFEKKGYPPGQHGQMRK-KISDYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E++FR  F  A R +G T  NL+  LE RLD +VYR+ F  +   ARQ
Sbjct: 60  KQKVKRIYGVL-ERQFRRYFDRATRMQGITGENLLQLLERRLDNVVYRSGFARSRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            + H H LVNGR VNI S+ CKEGDV+EVK+KS+ +A++ E+ + AE R +PE+IS++  
Sbjct: 119 LIRHNHFLVNGRKVNIPSFLCKEGDVVEVKEKSRDIAAIKESVETAEGRGLPEWISLDKT 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N  AT  R+P           +Q +L+VE YS+
Sbjct: 179 NFKATVNRLPVRSD---INYDVQEHLIVELYSK 208


>gi|254468445|ref|ZP_05081851.1| ribosomal protein S4 [beta proteobacterium KB13]
 gi|207087255|gb|EDZ64538.1| ribosomal protein S4 [beta proteobacterium KB13]
          Length = 209

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 119/213 (55%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K K  RR GE L+ +       K  +  RSY PG HGQRR  + S +G+QLR 
Sbjct: 1   MARNLDPKCKQCRREGEKLFLKGEKCFTDKCGIEKRSYPPGQHGQRRGGRLSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++K YG I EK+FRS + EADR +G T  NL+  LESRLD +VYR     +   +RQ
Sbjct: 61  KQKLRKIYG-ILEKQFRSYYAEADRLKGVTGENLLQLLESRLDNVVYRMGIGVSRSESRQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H  + VNG  VNI SY+ K GD + V + SK    +  A++ A ER  PE++ V+  
Sbjct: 120 LVRHNSITVNGNRVNIPSYQVKPGDQVAVAEASKNQLRIKAATEAADERGFPEWVEVDVK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  TF   P        P  +  +L+VE YS+
Sbjct: 180 KLSGTFKNKPQRDD---LPPTINESLIVELYSK 209


>gi|167855326|ref|ZP_02478094.1| 30S ribosomal protein S4 [Haemophilus parasuis 29755]
 gi|219871572|ref|YP_002475947.1| 30S ribosomal protein S4 [Haemophilus parasuis SH0165]
 gi|254764591|sp|B8F6P7|RS4_HAEPS RecName: Full=30S ribosomal protein S4
 gi|167853584|gb|EDS24830.1| 30S ribosomal protein S4 [Haemophilus parasuis 29755]
 gi|219691776|gb|ACL32999.1| 30S ribosomal protein S4 [Haemophilus parasuis SH0165]
          Length = 206

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DVI V++KSK+ A +  + +LA +R+ P ++ V+   M
Sbjct: 119 SHKSIVVNGRVVNIPSYQVSVDDVIAVREKSKKQARIKASLELATQREKPTWLEVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +  +L+VE YS+
Sbjct: 179 EGVFKRTPERSD---LSADINEHLIVELYSK 206


>gi|228999440|ref|ZP_04159019.1| 30S ribosomal protein S4 [Bacillus mycoides Rock3-17]
 gi|229006996|ref|ZP_04164624.1| 30S ribosomal protein S4 [Bacillus mycoides Rock1-4]
 gi|228754235|gb|EEM03652.1| 30S ribosomal protein S4 [Bacillus mycoides Rock1-4]
 gi|228760385|gb|EEM09352.1| 30S ribosomal protein S4 [Bacillus mycoides Rock3-17]
          Length = 200

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + ATF 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   L+VEFYSR
Sbjct: 178 RLPERAE---LAAEINEALIVEFYSR 200


>gi|269104036|ref|ZP_06156733.1| SSU ribosomal protein S4p (S9e) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163934|gb|EEZ42430.1| SSU ribosomal protein S4p (S9e) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ ++EA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYQEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ SY+    DV+ +++K+K  A +  A ++A +R++P ++ V++  M
Sbjct: 119 SHKAILVNGQVVNVPSYKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDNKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206


>gi|120553676|ref|YP_958027.1| ribosomal protein S4 [Marinobacter aquaeolei VT8]
 gi|152060959|sp|A1TYM1|RS4_MARAV RecName: Full=30S ribosomal protein S4
 gi|120323525|gb|ABM17840.1| SSU ribosomal protein S4P [Marinobacter aquaeolei VT8]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALDSKCNIETPPGMHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARGKGATGENLLQLLEGRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
           +H+ VLVN + VNI SY+ K GDV+ V++K+K    V  A  LA    P  ++ V+ + M
Sbjct: 119 SHKAVLVNDKPVNIPSYQVKPGDVVSVREKAKNQLRVKGALDLASSRAPVSWVEVDANKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +  +P   +    P  +  NL+VE YS+
Sbjct: 179 SGVYKSVPERTE---LPADINENLIVELYSK 206


>gi|313677145|ref|YP_004055141.1| SSU ribosomal protein s4p [Marivirga tractuosa DSM 4126]
 gi|312943843|gb|ADR23033.1| SSU ribosomal protein S4P [Marivirga tractuosa DSM 4126]
          Length = 201

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++ +  K KI RR  E ++G  K  ++ ++Y PG HG+ R+ K S + +QL  KQK K 
Sbjct: 1   MARYKGPKSKIARRFNEPIFGASK-ALSKKAYPPGQHGRGRRRKQSEYAIQLMEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F ++F +A R +G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFANLFDKASRKKGITGEVLLQLLESRLDNVVFRLGIAPTRRAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  +NI SY+ KE DVI V++KSK L ++ ++          ++  +  +M   FV
Sbjct: 119 ILVNGEILNIPSYQVKESDVIGVREKSKSLEAITDSLSSNTASKYSWLEFDKSSMSGKFV 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  +   L+VE YS+
Sbjct: 179 NIPQR---EDIPENINEQLIVELYSK 201


>gi|183600728|ref|ZP_02962221.1| hypothetical protein PROSTU_04324 [Providencia stuartii ATCC 25827]
 gi|212709003|ref|ZP_03317131.1| hypothetical protein PROVALCAL_00035 [Providencia alcalifaciens DSM
           30120]
 gi|268593565|ref|ZP_06127786.1| ribosomal protein S4 [Providencia rettgeri DSM 1131]
 gi|188019708|gb|EDU57748.1| hypothetical protein PROSTU_04324 [Providencia stuartii ATCC 25827]
 gi|212688369|gb|EEB47897.1| hypothetical protein PROVALCAL_00035 [Providencia alcalifaciens DSM
           30120]
 gi|291310842|gb|EFE51295.1| ribosomal protein S4 [Providencia rettgeri DSM 1131]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAEARQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DVI V++K+K+ + +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVISVREKAKKQSRIKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|323488432|ref|ZP_08093679.1| 30S ribosomal protein S4 [Planococcus donghaensis MPA1U2]
 gi|323397939|gb|EGA90738.1| 30S ribosomal protein S4 [Planococcus donghaensis MPA1U2]
          Length = 200

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGISLTGTGKE-LEKRPYAPGQHGANQRRKVSEYGLQLQEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F+++F +A +  G    N +  LE+RLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFKTLFNKAGKMPGKHGENFMILLEARLDNVVYRLGLARTRRQARQIVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I S+  K G  I  ++KS  L  V EA ++    VPEY++++ D+   TFV
Sbjct: 119 ILVDGKRVDIPSFSVKPGQTIAFREKSSNLDVVNEAIEV-NNFVPEYVTIDTDSKTGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   L+VE+YSR
Sbjct: 178 RLPERSE---LSAEINEQLIVEYYSR 200


>gi|299535430|ref|ZP_07048752.1| 30S ribosomal protein S4 [Lysinibacillus fusiformis ZC1]
 gi|298729191|gb|EFI69744.1| 30S ribosomal protein S4 [Lysinibacillus fusiformis ZC1]
          Length = 200

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGISLSGTGKE-IEKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F  A + +G    N +  LE+RLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-MNERQFRTLFNRAGKMKGVHGENFMILLETRLDNLVYRLGLARTRRGARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K G  I +++KS+ LA V+EA ++    VP+Y++ + D    TF 
Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISLREKSQNLAVVVEAIEV-NNFVPDYLTFDADKKEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VE+YSR
Sbjct: 178 RLPERSE---LSAEINEAFIVEYYSR 200


>gi|253995743|ref|YP_003047807.1| 30S ribosomal protein S4 [Methylotenera mobilis JLW8]
 gi|253982422|gb|ACT47280.1| ribosomal protein S4 [Methylotenera mobilis JLW8]
          Length = 209

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R++ PG HGQRR  + S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKAEKCFTDKCAIEKRNFPPGQHGQRRNQRLSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FRS + EADR +G T  NL+  LE RLD + YR     +   ARQ
Sbjct: 61  KQKVRRIYGVL-EGQFRSYYAEADRQKGITGENLLQLLECRLDNVTYRMGLGGSRTEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  +LVNG+ VNI SY+ K GDVI V + SK    +  A + AE R  PE++ V+  
Sbjct: 120 IVRHNSILVNGKRVNIPSYQVKAGDVISVAEASKTQLRIKGALEAAEQRGFPEWLDVDVK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  TF   P   +    P  +  +LVVE YS+
Sbjct: 180 ALKGTFKAKPQRDE---LPPTINESLVVELYSK 209


>gi|83720741|ref|YP_443547.1| 30S ribosomal protein S4 [Burkholderia thailandensis E264]
 gi|167582598|ref|ZP_02375472.1| 30S ribosomal protein S4 [Burkholderia thailandensis TXDOH]
 gi|167620712|ref|ZP_02389343.1| 30S ribosomal protein S4 [Burkholderia thailandensis Bt4]
 gi|257137667|ref|ZP_05585929.1| 30S ribosomal protein S4 [Burkholderia thailandensis E264]
 gi|123536225|sp|Q2SU52|RS4_BURTA RecName: Full=30S ribosomal protein S4
 gi|83654566|gb|ABC38629.1| ribosomal protein S4 [Burkholderia thailandensis E264]
          Length = 207

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + K GDVI +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVISIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207


>gi|89076300|ref|ZP_01162641.1| 30S ribosomal protein S4 [Photobacterium sp. SKA34]
 gi|90581702|ref|ZP_01237490.1| 30S ribosomal protein S4 [Vibrio angustum S14]
 gi|330447013|ref|ZP_08310663.1| ribosomal protein S4 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|89048004|gb|EAR53593.1| 30S ribosomal protein S4 [Photobacterium sp. SKA34]
 gi|90437117|gb|EAS62320.1| 30S ribosomal protein S4 [Vibrio angustum S14]
 gi|328491204|dbj|GAA05160.1| ribosomal protein S4 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K A R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRTYGVL-EKQFRNYYKTAARIKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+K  A +  A ++A +R++P ++ V+   M
Sbjct: 119 SHKAILVNGQVVNVPSFKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDSSKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206


>gi|308048015|ref|YP_003911581.1| 30S ribosomal protein S4P [Ferrimonas balearica DSM 9799]
 gi|307630205|gb|ADN74507.1| SSU ribosomal protein S4P [Ferrimonas balearica DSM 9799]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  R+++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTVPGQHGA-RRARLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLESRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ + VNGR VNI S+     DVI V++K+++ A +  A ++AE R+ P ++ V+   M
Sbjct: 119 SHKAIKVNGRVVNIPSFSVSPNDVIAVREKAQKQARIKGALEVAEQREKPTWVEVDGAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206


>gi|169632374|ref|YP_001706110.1| 30S ribosomal protein S4 [Acinetobacter baumannii SDF]
 gi|169794618|ref|YP_001712411.1| 30S ribosomal protein S4 [Acinetobacter baumannii AYE]
 gi|213158811|ref|YP_002320809.1| ribosomal protein S4 [Acinetobacter baumannii AB0057]
 gi|215482207|ref|YP_002324389.1| ribosomal protein S4 [Acinetobacter baumannii AB307-0294]
 gi|239503210|ref|ZP_04662520.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB900]
 gi|260557051|ref|ZP_05829268.1| ribosomal protein S4 [Acinetobacter baumannii ATCC 19606]
 gi|293610848|ref|ZP_06693148.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|294839723|ref|ZP_06784406.1| 30S ribosomal protein S4 [Acinetobacter sp. 6013113]
 gi|294842677|ref|ZP_06787360.1| 30S ribosomal protein S4 [Acinetobacter sp. 6014059]
 gi|294860401|ref|ZP_06798170.1| 30S ribosomal protein S4 [Acinetobacter sp. 6013150]
 gi|301345034|ref|ZP_07225775.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB056]
 gi|301512035|ref|ZP_07237272.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB058]
 gi|301595208|ref|ZP_07240216.1| 30S ribosomal protein S4 [Acinetobacter baumannii AB059]
 gi|152060924|sp|A3M960|RS4_ACIBT RecName: Full=30S ribosomal protein S4
 gi|226697785|sp|B7GW26|RS4_ACIB3 RecName: Full=30S ribosomal protein S4
 gi|226697786|sp|B7IA15|RS4_ACIB5 RecName: Full=30S ribosomal protein S4
 gi|226697788|sp|B0VQU2|RS4_ACIBS RecName: Full=30S ribosomal protein S4
 gi|226697789|sp|B0V6U6|RS4_ACIBY RecName: Full=30S ribosomal protein S4
 gi|169147545|emb|CAM85406.1| 30S ribosomal protein S4 [Acinetobacter baumannii AYE]
 gi|169151166|emb|CAO99838.1| 30S ribosomal protein S4 [Acinetobacter baumannii]
 gi|193078463|gb|ABO13454.2| 30S ribosomal protein S4 [Acinetobacter baumannii ATCC 17978]
 gi|213057971|gb|ACJ42873.1| ribosomal protein S4 [Acinetobacter baumannii AB0057]
 gi|213986640|gb|ACJ56939.1| ribosomal protein S4 [Acinetobacter baumannii AB307-0294]
 gi|260409657|gb|EEX02958.1| ribosomal protein S4 [Acinetobacter baumannii ATCC 19606]
 gi|292827192|gb|EFF85557.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|322509484|gb|ADX04938.1| 30S ribosomal protein S4 [Acinetobacter baumannii 1656-2]
 gi|323519505|gb|ADX93886.1| 30S ribosomal protein S4 [Acinetobacter baumannii TCDC-AB0715]
 gi|325123580|gb|ADY83103.1| 30S ribosomal protein S4 [Acinetobacter calcoaceticus PHEA-2]
          Length = 208

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P +I V+H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIEVDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208


>gi|299768690|ref|YP_003730716.1| 30S ribosomal protein S4 [Acinetobacter sp. DR1]
 gi|298698778|gb|ADI89343.1| 30S ribosomal protein S4 [Acinetobacter sp. DR1]
          Length = 208

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P +I V+H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIDVDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRAD---LPAEINESLIVELYSK 208


>gi|242237883|ref|YP_002986064.1| 30S ribosomal protein S4 [Dickeya dadantii Ech703]
 gi|242129940|gb|ACS84242.1| ribosomal protein S4 [Dickeya dadantii Ech703]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H+ V+VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 GHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|329888167|ref|ZP_08266765.1| ribosomal protein S4 [Brevundimonas diminuta ATCC 11568]
 gi|328846723|gb|EGF96285.1| ribosomal protein S4 [Brevundimonas diminuta ATCC 11568]
          Length = 205

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 134/205 (65%), Positives = 165/205 (80%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DR +GENLWGR KSPVN RSYGPG HGQRRKSK S FGLQL+AKQK+K 
Sbjct: 1   MSKRHSAKYKLDRAMGENLWGRAKSPVNKRSYGPGQHGQRRKSKVSDFGLQLKAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+EK+F + + EA R +G+TS NLI  LESRLD IVYRAKFVPT++AARQFV+H H
Sbjct: 61  YYGNITEKQFAATYAEAARRKGNTSENLIGLLESRLDAIVYRAKFVPTVWAARQFVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+IGSYR K GDV+EVK+KS+ +A VLEA Q +ERD+P+Y+ +        + 
Sbjct: 121 VTVNGKKVDIGSYRVKVGDVVEVKEKSRNMALVLEAQQSSERDLPDYLELGDRGFSVRYG 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R+P  L DVPYPV M+PNLVVE+YS
Sbjct: 181 RVPE-LSDVPYPVKMEPNLVVEYYS 204


>gi|300721390|ref|YP_003710661.1| 30S ribosomal subunit protein S4 [Xenorhabdus nematophila ATCC
           19061]
 gi|297627878|emb|CBJ88424.1| 30S ribosomal subunit protein S4 [Xenorhabdus nematophila ATCC
           19061]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLNLLESRLDNVVYRMGFGATRAESRQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ + VNGR VNI SY+    DV+ V++K+K+ A +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAITVNGRVVNIASYQVSPNDVVSVREKAKKQARIKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|109897338|ref|YP_660593.1| 30S ribosomal protein S4 [Pseudoalteromonas atlantica T6c]
 gi|122972198|sp|Q15X49|RS4_PSEA6 RecName: Full=30S ribosomal protein S4
 gi|109699619|gb|ABG39539.1| SSU ribosomal protein S4P [Pseudoalteromonas atlantica T6c]
 gi|332175075|gb|AEE24329.1| ribosomal protein S4 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRIGFASTRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S+     DV+ V++K+K+ A ++ A +LAE R+ P +I V+   M
Sbjct: 119 SHKAILVNGQVVNVPSFNVSADDVVSVREKAKKQARIVSALELAEQREKPTWIEVDSKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRVPERTD---LSAEINEQLIVELYSK 206


>gi|222151637|ref|YP_002560793.1| 30S ribosomal protein S4 [Macrococcus caseolyticus JCSC5402]
 gi|254764595|sp|B9E7C9|RS4_MACCJ RecName: Full=30S ribosomal protein S4
 gi|222120762|dbj|BAH18097.1| 30S ribosomal protein S4 [Macrococcus caseolyticus JCSC5402]
          Length = 200

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARFTGSTWKKSRRLGISLSGTGKE-LERRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E++FR+IF  A + +G    N ++ L SRLD +VY+     T   ARQ VNH H
Sbjct: 60  MYG-INERQFRTIFDRAGKMKGIHGANFMALLASRLDAVVYQLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SY+ K G VI V++KS++L  + E+ +L+   VPEY++ + D +  TFV
Sbjct: 119 IMVDGARVDIPSYQLKPGQVISVREKSQKLNIIAESVELSNH-VPEYLTFDADKLEGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   L+VE+YSR
Sbjct: 178 RVPERSE---LSAEINEQLIVEYYSR 200


>gi|330827906|ref|YP_004390858.1| 30S ribosomal protein S4 [Aeromonas veronii B565]
 gi|328803042|gb|AEB48241.1| 30S ribosomal protein S4 [Aeromonas veronii B565]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYIGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKARLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +++A R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DVI V++K+K+ A +  + ++A +R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIPSFQVSPEDVICVREKAKKQARIKASLEVAGQREKPTWVEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206


>gi|294012169|ref|YP_003545629.1| ribosomal protein S4 [Sphingobium japonicum UT26S]
 gi|292675499|dbj|BAI97017.1| ribosomal protein S4 [Sphingobium japonicum UT26S]
          Length = 204

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 123/206 (59%), Positives = 157/206 (76%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S +G+QLRAKQK+K 
Sbjct: 1   MSKRSSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDYGIQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGDI+EK+F+  + EA R +GDT  NLI  LE RLD +VYRAKF PTI+++RQ V+H H
Sbjct: 61  YYGDITEKQFKKNYTEAARMKGDTGQNLIGLLERRLDAVVYRAKFAPTIWSSRQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   NI S   K GD I + +K++++A VLEA  L ERD+P+Y+  +      T+V
Sbjct: 121 IYVNGVKCNIASRLVKPGDEITLGKKAQEMALVLEAQGLPERDIPDYVVADGAA-KVTYV 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVPT-LDEVPYPVKMEPNLVVEFYSR 204


>gi|251787995|ref|YP_003002716.1| 30S ribosomal protein S4 [Dickeya zeae Ech1591]
 gi|247536616|gb|ACT05237.1| ribosomal protein S4 [Dickeya zeae Ech1591]
          Length = 206

 Score =  219 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|254785103|ref|YP_003072531.1| ribosomal protein S4 [Teredinibacter turnerae T7901]
 gi|259495299|sp|C5BQ85|RS4_TERTT RecName: Full=30S ribosomal protein S4
 gi|237687392|gb|ACR14656.1| ribosomal protein S4 [Teredinibacter turnerae T7901]
          Length = 206

 Score =  219 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/211 (41%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +    P+ ++      PG HGQ R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPTCKLSRREGTDLFLKSGVRPLESKCKAETAPGQHGQ-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FRS +KEA R +G T  NL+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRTYG-LLEKQFRSYYKEAARLKGATGENLLKLLESRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ +LVNG+++NI SY+  EGDVI V++KSK    +  A  + A+R   E++ VN D  
Sbjct: 119 SHKAILVNGKALNIPSYQVSEGDVIAVREKSKNQLRIQNALGIAAQRPDVEWVDVNADKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P     V  P  +  NL+VE YS+
Sbjct: 179 EGTFKRVPDR---VDLPADINENLIVELYSK 206


>gi|288801124|ref|ZP_06406580.1| ribosomal protein S4 [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332058|gb|EFC70540.1| ribosomal protein S4 [Prevotella sp. oral taxon 299 str. F0039]
          Length = 201

 Score =  219 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRKKMSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNLFEKAAKASGITGEVLLQLLESRLDNVVFRMGLAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SY  K G VI V++K+K L  +  A          +I  ++      F+
Sbjct: 119 IIVDGSVVNIPSYSVKPGQVIGVREKAKSLEVIETALAGFNHSKYPWIEWDNATKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HTPERAD---IPENIKEQLIVELYSK 201


>gi|262277060|ref|ZP_06054853.1| ribosomal protein S4 [alpha proteobacterium HIMB114]
 gi|262224163|gb|EEY74622.1| ribosomal protein S4 [alpha proteobacterium HIMB114]
          Length = 205

 Score =  219 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 120/206 (58%), Positives = 161/206 (78%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR  SKHK+DRR+G N+WGRPKSP N+R+YGPG HGQR  +KPS + +QL+AKQK+K 
Sbjct: 1   MTKRIKSKHKVDRRLGTNIWGRPKSPFNSRAYGPGQHGQRSSAKPSDYKVQLQAKQKLKN 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+++E++FR++++EADR RG+T  NL+  LESRLD ++YRAKF  T+F ARQ +NH H
Sbjct: 61  YYGNLNERQFRNLYREADRRRGNTGENLVGLLESRLDAVIYRAKFATTVFQARQLINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI S++  + D +E+K+ SKQLA VL ++QL ERDVPEYI  +H  M A   
Sbjct: 121 VKVNGKRVNISSFKLNDKDEVEIKESSKQLAYVLASTQLKERDVPEYIFADHKKMTAKLA 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P    ++PYP IM+PNLVVE+YSR
Sbjct: 181 RVP-KFDEIPYPAIMEPNLVVEYYSR 205


>gi|23099660|ref|NP_693126.1| 30S ribosomal protein S4 [Oceanobacillus iheyensis HTE831]
 gi|26399359|sp|P59130|RS4_OCEIH RecName: Full=30S ribosomal protein S4
 gi|22777890|dbj|BAC14161.1| 30S ribosomal protein S4 [Oceanobacillus iheyensis HTE831]
          Length = 200

 Score =  219 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  ++ R Y PG HG  ++ K S +GLQ++ KQK++ 
Sbjct: 1   MARYTGSVWKKSRRLGISLTGTGKE-LDKRPYAPGQHGPNQRRKLSEYGLQMQEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A + +G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-LNERQFRTLFDKAGKMKGIHGENFMILLESRLDNLVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V V+G  V+I SY  K G VI +++KSK L  V EA + A   VPEY S + D M  ++ 
Sbjct: 119 VTVDGGRVDIPSYAIKPGQVIGLREKSKNLDVVKEALE-ANSFVPEYTSFDADKMEGSYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VEFYSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEFYSR 200


>gi|260061922|ref|YP_003195002.1| 30S ribosomal protein S4 [Robiginitalea biformata HTCC2501]
 gi|88786055|gb|EAR17224.1| 30S ribosomal protein S4 [Robiginitalea biformata HTCC2501]
          Length = 201

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  K     ++Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKSKIARKFGEAIFGDDK-AFEKKNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR++F +A+RS+G T   L+   ESRLD +VYR    P+  AARQ V+HR
Sbjct: 60  YTYG-ILERQFRNLFAQANRSKGVTGEVLLQLCESRLDNVVYRMGIAPSRRAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY    GDV+ V++KSK L ++ ++      +V E+IS N D    TF
Sbjct: 119 HITVNGELVNIPSYSLSAGDVVGVREKSKSLQAIEDSLS-NHSNVYEWISWNSDKKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P  L+    P  ++  L+VE YS+
Sbjct: 178 VAVPERLQ---IPENIKEQLIVELYSK 201


>gi|239818004|ref|YP_002946914.1| 30S ribosomal protein S4 [Variovorax paradoxus S110]
 gi|319796381|ref|YP_004158021.1| ribosomal protein s4 [Variovorax paradoxus EPS]
 gi|259495303|sp|C5CQ76|RS4_VARPS RecName: Full=30S ribosomal protein S4
 gi|239804581|gb|ACS21648.1| ribosomal protein S4 [Variovorax paradoxus S110]
 gi|315598844|gb|ADU39910.1| ribosomal protein S4 [Variovorax paradoxus EPS]
          Length = 207

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+    + S +GLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIQDKAKFDSK---PGQHGRTSGQRTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+EADR RG+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEEADRRRGNTGANLLFILESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GDVI V+ KSK+   + EA QLA++  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGQSVNIPSYLVKTGDVIAVRDKSKKQTRIAEALQLAQQVGIPAWVEVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D    TF ++P   +   +   +  +L+VE YSR
Sbjct: 177 DKAEGTFKKVPDRDE---FAADINESLIVELYSR 207


>gi|260549816|ref|ZP_05824032.1| ribosomal protein S4 [Acinetobacter sp. RUH2624]
 gi|260407066|gb|EEX00543.1| ribosomal protein S4 [Acinetobacter sp. RUH2624]
          Length = 208

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P +I V+H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIDVDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208


>gi|271502222|ref|YP_003335248.1| 30S ribosomal protein S4 [Dickeya dadantii Ech586]
 gi|270345777|gb|ACZ78542.1| ribosomal protein S4 [Dickeya dadantii Ech586]
          Length = 206

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ VLVNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAVLVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|261867278|ref|YP_003255200.1| 30S ribosomal protein S4 [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412610|gb|ACX81981.1| hypothetical protein D11S_0571 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 206

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDIAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD IVYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNIVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE ++ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELAEQKEKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                R+P           +  +L+VE YS+
Sbjct: 179 EGVLKRVPERSD---LSADINEHLIVELYSK 206


>gi|184159574|ref|YP_001847913.1| 30S ribosomal protein S4 [Acinetobacter baumannii ACICU]
 gi|226697787|sp|B2HZ84|RS4_ACIBC RecName: Full=30S ribosomal protein S4
 gi|183211168|gb|ACC58566.1| 30S ribosomal protein S4 [Acinetobacter baumannii ACICU]
          Length = 208

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P +I V+H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKSGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIEVDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208


>gi|161523454|ref|YP_001578466.1| 30S ribosomal protein S4 [Burkholderia multivorans ATCC 17616]
 gi|189351773|ref|YP_001947401.1| 30S ribosomal protein S4 [Burkholderia multivorans ATCC 17616]
 gi|221201590|ref|ZP_03574628.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2M]
 gi|221207335|ref|ZP_03580345.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2]
 gi|221213473|ref|ZP_03586448.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD1]
 gi|226697816|sp|A9ADL8|RS4_BURM1 RecName: Full=30S ribosomal protein S4
 gi|160340883|gb|ABX13969.1| ribosomal protein S4 [Burkholderia multivorans ATCC 17616]
 gi|189335795|dbj|BAG44865.1| small subunit ribosomal protein S4 [Burkholderia multivorans ATCC
           17616]
 gi|221166925|gb|EED99396.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD1]
 gi|221172923|gb|EEE05360.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2]
 gi|221178406|gb|EEE10815.1| 30S ribosomal protein S4 [Burkholderia multivorans CGD2M]
          Length = 207

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GDVI +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKSITVNGIVANVPSQQVKAGDVIAIREKAKKQARIIEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IGGDINESLIVELYSR 207


>gi|254253495|ref|ZP_04946813.1| Ribosomal protein S4 [Burkholderia dolosa AUO158]
 gi|124896104|gb|EAY69984.1| Ribosomal protein S4 [Burkholderia dolosa AUO158]
          Length = 207

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + K GDVI +++K+K+ A ++E+  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVIAIREKAKKQARIVESLSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207


>gi|313680488|ref|YP_004058227.1| SSU ribosomal protein s4p [Oceanithermus profundus DSM 14977]
 gi|313153203|gb|ADR37054.1| SSU ribosomal protein S4P [Oceanithermus profundus DSM 14977]
          Length = 209

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +      PK  +  R Y PG HGQRR  +PS + ++LR 
Sbjct: 1   MGRYIGPVCRLCRREGVKLYLKGDRCYSPKCAIERRPYAPGQHGQRRARRPSDYAVRLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQKM++ YG ISEK+FR++F+EA + +G T    +  LESRLD +VYR     +   ARQ
Sbjct: 61  KQKMRRIYG-ISEKQFRNLFEEASKKKGVTGTVFLRLLESRLDNVVYRLGIASSRKQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+ V GR V + SYR + GDVI V +  K++ ++   ++ A+ R    ++  + +
Sbjct: 120 LVRHGHIAVGGRKVTVPSYRVRPGDVIAVTEAGKKIGAIQANAEAAKGRKTGPWLEFDPE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            MV  F+R+P   +D+  PV     LV+E+YSR
Sbjct: 180 KMVGKFLRLPER-EDLALPV--NEQLVIEYYSR 209


>gi|145300911|ref|YP_001143752.1| ribosomal protein S4 [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|152060929|sp|A4SSY2|RS4_AERS4 RecName: Full=30S ribosomal protein S4
 gi|142853683|gb|ABO92004.1| ribosomal protein S4 [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 206

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYIGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGA-RKARLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +++A R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++K+K+ A +  + ++A +R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIPSFQVSPEDVVCVREKAKKQARIKASLEVAGQREKPTWVEVDTAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206


>gi|225011671|ref|ZP_03702109.1| ribosomal protein S4 [Flavobacteria bacterium MS024-2A]
 gi|225004174|gb|EEG42146.1| ribosomal protein S4 [Flavobacteria bacterium MS024-2A]
          Length = 201

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEPIFGDDKS-FEKRNYPPGQHGNARRRGKKSEYAVQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR++F++A R++G T   L+   ESRLD +VYR    PT   ARQ V+HR
Sbjct: 60  FTYG-ILERQFRNLFEKASRNKGVTGEVLLQLCESRLDNVVYRLGLSPTRSGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ +NG  +NI SY+ K GDV+ V++KSK L  ++EA +  +    E++S N + +  TF
Sbjct: 119 HITINGSILNIPSYQVKVGDVVGVREKSKSLNVIIEA-KGKDASAYEWLSWNKEQLQGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V IP  L+    P  ++  L+VE YS+
Sbjct: 178 VSIPERLQ---IPENIKEQLIVELYSK 201


>gi|167629495|ref|YP_001679994.1| 30S ribosomal protein s4 [Heliobacterium modesticaldum Ice1]
 gi|226699071|sp|B0TC84|RS4_HELMI RecName: Full=30S ribosomal protein S4
 gi|167592235|gb|ABZ83983.1| 30S ribosomal protein s4 [Heliobacterium modesticaldum Ice1]
          Length = 208

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  V+ R+Y PG HGQ RK    Y GLQLR 
Sbjct: 1   MARYTGPVCRLCRREGAKLYLKGERCYTGKCAVDRRTYAPGQHGQGRKKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR+ F EADR +G T  NL+  LE+RLD +V+R  F  +   ARQ
Sbjct: 60  KQKARRVYG-ILEGQFRAYFAEADRQQGVTGENLLRLLETRLDNVVFRLGFARSRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
           FV H H  +NG+ VNI S + + GDVI++K+KSK      E    L ++  P ++ ++ +
Sbjct: 119 FVLHNHFTLNGKKVNIPSIQLRVGDVIQLKEKSKDTPLFKEIVDGLGQKTPPAWLELDVN 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    + +P           +Q +L+VE YSR
Sbjct: 179 TLSGRVIALPKR---EDIDTNLQEHLIVELYSR 208


>gi|186477562|ref|YP_001859032.1| 30S ribosomal protein S4 [Burkholderia phymatum STM815]
 gi|226697817|sp|B2JI40|RS4_BURP8 RecName: Full=30S ribosomal protein S4
 gi|184194021|gb|ACC71986.1| ribosomal protein S4 [Burkholderia phymatum STM815]
          Length = 207

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLKLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + K GDVI V++++K+ A +LEA  LAE+  +P++++V+ 
Sbjct: 117 QLVSHKAITVNGVVANIPSLQVKAGDVIAVREQAKKQARILEALSLAEQGGLPQWVAVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF  +P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKSMPERSD---IAGDINESLIVELYSR 207


>gi|90414980|ref|ZP_01222942.1| 30S ribosomal protein S4 [Photobacterium profundum 3TCK]
 gi|161936335|ref|YP_128585.2| 30S ribosomal protein S4 [Photobacterium profundum SS9]
 gi|152031675|sp|Q6LV92|RS4_PHOPR RecName: Full=30S ribosomal protein S4
 gi|90323919|gb|EAS40519.1| 30S ribosomal protein S4 [Photobacterium profundum 3TCK]
          Length = 206

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRTYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVNG  VN+ S++    DV+ +++K+K  A +  A ++A +R++P ++ V++  +
Sbjct: 119 SHKAILVNGTVVNVPSFKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDNSKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206


>gi|118595311|ref|ZP_01552658.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181]
 gi|118441089|gb|EAV47716.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181]
          Length = 209

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R+Y PG HGQRR S+ S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIEKRNYPPGQHGQRRASRLSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+FR  + EADR +G T  NL+  LESRLD +VY+     +   +RQ
Sbjct: 61  KQKLRRMYGVL-EKQFRGYYAEADRRKGITGENLLQLLESRLDNVVYKMGLGASRTESRQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H  +LVNG+ VNI S++   GD + V + +K    +  A + A ER  PE++ V+  
Sbjct: 120 IVKHNAILVNGKRVNIPSFQVSPGDEVSVVESAKSQLRIKGAIEAAVERGFPEWLEVDSK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F   P        P  +  +LVVE YS+
Sbjct: 180 AFKGVFKNKPQRDD---LPSTINESLVVELYSK 209


>gi|325269509|ref|ZP_08136125.1| 30S ribosomal protein S4 [Prevotella multiformis DSM 16608]
 gi|324988128|gb|EGC20095.1| 30S ribosomal protein S4 [Prevotella multiformis DSM 16608]
          Length = 202

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 116/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  +  R++ PG HG  R+ K S +G QL  KQK K 
Sbjct: 1   MARYIGPKSRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F +A ++ G T   L+  LESRLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-ERQFRNLFDKAAKADGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNG  VNI SY+ K GDV+ V++K+K L  +  A          ++  + +     F+
Sbjct: 119 IVVNGNVVNIASYQVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENGKCGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201


>gi|228993388|ref|ZP_04153304.1| 30S ribosomal protein S4 [Bacillus pseudomycoides DSM 12442]
 gi|228766456|gb|EEM15099.1| 30S ribosomal protein S4 [Bacillus pseudomycoides DSM 12442]
          Length = 200

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + ATF 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLAATFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   L+VEFYSR
Sbjct: 178 RLPERAE---LAAEINEALIVEFYSR 200


>gi|218294781|ref|ZP_03495635.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23]
 gi|218244689|gb|EED11213.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23]
          Length = 209

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +      PK  +  R Y PG HGQRR  +PS + ++LR 
Sbjct: 1   MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQRRARRPSDYAVRLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG ISE +FR++F+EA R +G T   L+  LESRLD +VYR  F  +   ARQ
Sbjct: 61  KQKLRRIYG-ISETQFRNLFEEASRKKGVTGTVLLGLLESRLDNVVYRLGFAQSRRQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+ VNGR V++ +YR K GD I + ++S+ L  + E  + +  R V  ++S++ +
Sbjct: 120 MVRHGHITVNGRRVDLPAYRVKPGDEIAIAERSRNLTFIRENLEAMKGRKVGPWLSLDVE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F+R+P   +D+  PV     LV+EFYSR
Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVIEFYSR 209


>gi|296163296|ref|ZP_06846057.1| ribosomal protein S4 [Burkholderia sp. Ch1-1]
 gi|295886435|gb|EFG66292.1| ribosomal protein S4 [Burkholderia sp. Ch1-1]
          Length = 207

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + K GDV+ V+++ K+ A +LEA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGVVSNIPSMQVKAGDVVAVREQKKKQARILEALSLAEQGGLPSWVAVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF + P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207


>gi|218131301|ref|ZP_03460105.1| hypothetical protein BACEGG_02912 [Bacteroides eggerthii DSM 20697]
 gi|317476331|ref|ZP_07935580.1| ribosomal protein S4 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986518|gb|EEC52854.1| hypothetical protein BACEGG_02912 [Bacteroides eggerthii DSM 20697]
 gi|316907357|gb|EFV29062.1| ribosomal protein S4 [Bacteroides eggerthii 1_2_48FAA]
          Length = 201

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V+++SK L  +  +          ++  + +  V   +
Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNAKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|322418390|ref|YP_004197613.1| 30S ribosomal protein S4 [Geobacter sp. M18]
 gi|320124777|gb|ADW12337.1| ribosomal protein S4 [Geobacter sp. M18]
          Length = 208

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  +  RSY PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYTGPSCRLCRREGSELFLKGERCYTDKCAIKRRSYPPGQHGQGR-IKVSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR  F+ ADR +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVRRIYG-ILENQFRGYFESADRMKGVTGENLLFLLERRLDNVVYRLGFATSRDEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NGR  NI S + K GDVI++++KS+++A + E+ +    R +P+++ ++ D
Sbjct: 119 LVRHSHFTLNGRKANIPSIQVKAGDVIQLREKSRKIAVITESLEAVVRRGIPQWLELDKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T    P   +D+  P  +Q  L+VE YS+
Sbjct: 179 AFKGTVKTSPVR-EDITMP--IQEQLIVELYSK 208


>gi|325529703|gb|EGD06566.1| 30S ribosomal protein S4 [Burkholderia sp. TJI49]
          Length = 207

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GDVI +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKSITVNGIVANVPSQQVKAGDVIAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207


>gi|261346911|ref|ZP_05974555.1| ribosomal protein S4 [Providencia rustigianii DSM 4541]
 gi|282564977|gb|EFB70512.1| ribosomal protein S4 [Providencia rustigianii DSM 4541]
          Length = 206

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLTLLEGRLDNVVYRMGFGATRAEARQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DVI V++K+K+ + +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVISVREKAKKQSRIKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRMPERTD---LSADINEHLIVELYSK 206


>gi|221133739|ref|ZP_03560044.1| 30S ribosomal protein S4 [Glaciecola sp. HTCC2999]
          Length = 206

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLDTAPGQHGA-RRGRLSDYGIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ + VNG+ VNI S++      + V++K+K+ A ++ A +LA +R+ P +I V+   +
Sbjct: 119 SHKAICVNGQVVNIPSFKVSAETNVSVREKAKKQARIISAVELADQREKPTWIEVDGAKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 SGDFKRLPERSD---LSAEINEQLIVELYSK 206


>gi|167764347|ref|ZP_02436472.1| hypothetical protein BACSTE_02731 [Bacteroides stercoris ATCC
           43183]
 gi|167697752|gb|EDS14331.1| hypothetical protein BACSTE_02731 [Bacteroides stercoris ATCC
           43183]
          Length = 201

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V+++SK L  +  +          ++  + +  V   +
Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNAKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++ +L+VE YS+
Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201


>gi|120437150|ref|YP_862836.1| 30S ribosomal protein S4 [Gramella forsetii KT0803]
 gi|152060951|sp|A0M574|RS4_GRAFK RecName: Full=30S ribosomal protein S4
 gi|117579300|emb|CAL67769.1| 30S ribosomal protein S4 [Gramella forsetii KT0803]
          Length = 201

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 90/207 (43%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR++F++A R++G T   L+   ESRLD +VYR    P+  AARQ V HR
Sbjct: 60  YTYG-ILERQFRNMFEKATRAQGITGEVLLQLCESRLDNVVYRMGVAPSRRAARQLVGHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK LA V E+       V E+IS N +    TF
Sbjct: 119 HITVNGELVNIPSYHLKAGDVVGVREKSKSLAVVQESLS-NNSSVYEWISWNSEKKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     V  P  +    +VE YS+
Sbjct: 178 VAVPGR---VQIPENINEQFIVELYSK 201


>gi|329962292|ref|ZP_08300298.1| ribosomal protein S4 [Bacteroides fluxus YIT 12057]
 gi|328530400|gb|EGF57277.1| ribosomal protein S4 [Bacteroides fluxus YIT 12057]
          Length = 201

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A+ ++G T   L+  LE RLD IV+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG  VN+ SY  K G VI V+++SK L  +  +          ++  + ++ V   +
Sbjct: 119 ITVNGEVVNVPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++ +L+VE YS+
Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201


>gi|154687087|ref|YP_001422248.1| 30S ribosomal protein S4 [Bacillus amyloliquefaciens FZB42]
 gi|308174649|ref|YP_003921354.1| 30S ribosomal protein S4 (BS4) [Bacillus amyloliquefaciens DSM 7]
 gi|171855002|sp|A7Z7P1|RS4_BACA2 RecName: Full=30S ribosomal protein S4
 gi|154352938|gb|ABS75017.1| RpsD [Bacillus amyloliquefaciens FZB42]
 gi|307607513|emb|CBI43884.1| ribosomal protein S4 (BS4) [Bacillus amyloliquefaciens DSM 7]
 gi|328554576|gb|AEB25068.1| 30S ribosomal protein S4 [Bacillus amyloliquefaciens TA208]
 gi|328912981|gb|AEB64577.1| 30S ribosomal protein S4 [Bacillus amyloliquefaciens LL3]
          Length = 200

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  L++RLD +VY+     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRTLFDKAAKMTGKHGENFMILLDARLDNVVYKLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I SY+ K G  I V++KS+ L+ + E+ ++    VPEY++ + + +  TF 
Sbjct: 119 ILVDGSRVDIPSYQVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VEFYSR
Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200


>gi|107024278|ref|YP_622605.1| 30S ribosomal protein S4 [Burkholderia cenocepacia AU 1054]
 gi|116688397|ref|YP_834020.1| 30S ribosomal protein S4 [Burkholderia cenocepacia HI2424]
 gi|170731707|ref|YP_001763654.1| 30S ribosomal protein S4 [Burkholderia cenocepacia MC0-3]
 gi|206558666|ref|YP_002229426.1| 30S ribosomal protein S4 [Burkholderia cenocepacia J2315]
 gi|254246578|ref|ZP_04939899.1| Ribosomal protein S4 [Burkholderia cenocepacia PC184]
 gi|123371103|sp|Q1BRX3|RS4_BURCA RecName: Full=30S ribosomal protein S4
 gi|152060938|sp|A0K3Q0|RS4_BURCH RecName: Full=30S ribosomal protein S4
 gi|226697814|sp|B1JU47|RS4_BURCC RecName: Full=30S ribosomal protein S4
 gi|226697815|sp|B4E5E5|RS4_BURCJ RecName: Full=30S ribosomal protein S4
 gi|105894467|gb|ABF77632.1| SSU ribosomal protein S4P [Burkholderia cenocepacia AU 1054]
 gi|116646486|gb|ABK07127.1| SSU ribosomal protein S4P [Burkholderia cenocepacia HI2424]
 gi|124871354|gb|EAY63070.1| Ribosomal protein S4 [Burkholderia cenocepacia PC184]
 gi|169814949|gb|ACA89532.1| ribosomal protein S4 [Burkholderia cenocepacia MC0-3]
 gi|198034703|emb|CAR50570.1| 30S ribosomal protein S4 [Burkholderia cenocepacia J2315]
          Length = 207

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GDV+ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P   +       +  +L+VE YSR
Sbjct: 177 KKFEGTFKQMPERAE---IAGDINESLIVELYSR 207


>gi|330815273|ref|YP_004358978.1| 30S ribosomal protein S4 [Burkholderia gladioli BSR3]
 gi|327367666|gb|AEA59022.1| 30S ribosomal protein S4 [Burkholderia gladioli BSR3]
          Length = 207

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V H+ + VNG   NI S + K GD+I +++KSK+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVGHKAITVNGIVSNIPSLQVKAGDIIAIREKSKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P   +       +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAE---IAGDINESLIVELYSR 207


>gi|91785440|ref|YP_560646.1| 30S ribosomal protein S4 [Burkholderia xenovorans LB400]
 gi|123358404|sp|Q13TJ5|RS4_BURXL RecName: Full=30S ribosomal protein S4
 gi|91689394|gb|ABE32594.1| SSU ribosomal protein S4P [Burkholderia xenovorans LB400]
          Length = 207

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ ++VNG   NI S + K GDV+ V+++ K+ A +LEA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAIMVNGVVSNIPSMQVKAGDVVAVREQKKKQARILEALSLAEQGGLPSWVAVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF + P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207


>gi|262373497|ref|ZP_06066775.1| ribosomal protein S4 [Acinetobacter junii SH205]
 gi|262311250|gb|EEY92336.1| ribosomal protein S4 [Acinetobacter junii SH205]
          Length = 208

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P ++ V+H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMEVDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208


>gi|220935468|ref|YP_002514367.1| 30S ribosomal protein S4 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254764620|sp|B8GV34|RS4_THISH RecName: Full=30S ribosomal protein S4
 gi|219996778|gb|ACL73380.1| 30S ribosomal protein S4 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 206

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ + +   ++T+      PG HG  R+++ S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKGRGRSLDTKCKLDKAPGQHG-DRRARLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +K A R +G T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KLRRIYGVL-ERQFRNYYKTASRMKGSTGENLLQLLERRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ +  DV+ V++K+K+   + ++  LAE+   PE++ V+   M
Sbjct: 119 SHKAIQVNGQAVNIASYQVQPSDVVAVREKAKKQVRIQDSLTLAEQFGFPEWVEVDTKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  IP   +    P  +  +LVVE YS+
Sbjct: 179 EGVFKSIPERSE---LPAEINESLVVELYSK 206


>gi|170718273|ref|YP_001785291.1| 30S ribosomal protein S4 [Haemophilus somnus 2336]
 gi|189045384|sp|B0UX38|RS4_HAES2 RecName: Full=30S ribosomal protein S4
 gi|168826402|gb|ACA31773.1| ribosomal protein S4 [Haemophilus somnus 2336]
          Length = 206

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V    M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQREKPTWLEVEAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|157693366|ref|YP_001487828.1| 30S ribosomal protein S4 [Bacillus pumilus SAFR-032]
 gi|172046056|sp|A8FGA1|RS4_BACP2 RecName: Full=30S ribosomal protein S4
 gi|157682124|gb|ABV63268.1| ribosomal protein S4 [Bacillus pumilus SAFR-032]
          Length = 200

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKISRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  LE+RLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRTLFDKAAKLPGKQGENFMILLETRLDNLVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I S+  K G  I +++KS+ LA V E+ ++    VPEY++ + + +  TF 
Sbjct: 119 ILVDGSRVDIPSFSVKPGQTIALREKSQNLAVVKESVEV-NSFVPEYLTFDAEKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VEFYSR
Sbjct: 178 RLPERSELAP---EISEQLIVEFYSR 200


>gi|156932259|ref|YP_001436175.1| 30S ribosomal protein S4 [Cronobacter sakazakii ATCC BAA-894]
 gi|260599616|ref|YP_003212187.1| 30S ribosomal protein S4 [Cronobacter turicensis z3032]
 gi|171769807|sp|A7MPF7|RS4_ENTS8 RecName: Full=30S ribosomal protein S4
 gi|156530513|gb|ABU75339.1| hypothetical protein ESA_00030 [Cronobacter sakazakii ATCC BAA-894]
 gi|260218793|emb|CBA34141.1| 30S ribosomal protein S4 [Cronobacter turicensis z3032]
          Length = 206

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ V++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRKPERTD---LSADINEHLIVELYSK 206


>gi|134096297|ref|YP_001101372.1| 30S ribosomal protein S4 [Herminiimonas arsenicoxydans]
 gi|172044175|sp|A4G9R4|RS4_HERAR RecName: Full=30S ribosomal protein S4
 gi|133740200|emb|CAL63251.1| 30S ribosomal subunit protein S4 [Herminiimonas arsenicoxydans]
          Length = 207

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +G QLR KQ
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG I E++FR  F EADR +G+T   L+  LE+RLD +VYR  F  T    RQ V
Sbjct: 61  KVKRMYG-ILERQFRRYFAEADRRKGNTGETLLKLLETRLDNVVYRMGFGSTRAEGRQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+   VNG  VNI SY+ K GD++ V++KSK+   ++EA  LAE+  +P +++V+   M
Sbjct: 120 SHKAFTVNGIVVNIASYQVKPGDIVAVREKSKKQVRIVEALSLAEQIGMPSWVAVDSKKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P   +       +  +L+VE YSR
Sbjct: 180 EGTFKSVPDRSE---IAADVNESLIVELYSR 207


>gi|126651345|ref|ZP_01723552.1| 30S ribosomal protein S4 [Bacillus sp. B14905]
 gi|169829591|ref|YP_001699749.1| 30S ribosomal protein S4 [Lysinibacillus sphaericus C3-41]
 gi|226699085|sp|B1HX43|RS4_LYSSC RecName: Full=30S ribosomal protein S4
 gi|126591874|gb|EAZ85957.1| 30S ribosomal protein S4 [Bacillus sp. B14905]
 gi|168994079|gb|ACA41619.1| 30S ribosomal protein S4 [Lysinibacillus sphaericus C3-41]
          Length = 200

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGISLSGTGKE-IEKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F  A + +G    N +  LE+RLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-MNERQFRTLFNRAGKMKGVHGENFMILLETRLDNLVYRLGLARTRRGARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I S+  K G  I +++KS+ LA V EA ++    VP+Y++ + D    TF 
Sbjct: 119 ILVDGKRVDIPSFSVKPGQTISLREKSQNLAVVGEAIEV-NNFVPDYLTFDADKKEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +  + +VE+YSR
Sbjct: 178 RLPERSE---LSAEINESFIVEYYSR 200


>gi|117618638|ref|YP_854866.1| ribosomal protein S4 [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|152060928|sp|A0KF44|RS4_AERHH RecName: Full=30S ribosomal protein S4
 gi|117560045|gb|ABK36993.1| ribosomal protein S4 [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 206

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYIGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTVPGQHGA-RKARLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +++A R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DVI V++K+K+ A +  + ++A +R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIPSFQVSPEDVICVREKAKKQARIKASLEVAGQREKPTWVEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206


>gi|113869406|ref|YP_727895.1| 30S ribosomal protein S4 [Ralstonia eutropha H16]
 gi|123032616|sp|Q0K644|RS4_RALEH RecName: Full=30S ribosomal protein S4
 gi|113528182|emb|CAJ94527.1| SSU ribosomal protein S4 [Ralstonia eutropha H16]
          Length = 207

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDV+ ++++SK+   + EA  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQTLNVPSAQIKSGDVVTIREQSKKQVRIAEALSLAEQSGFPTWVAVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPDRAD---ISGDINESLIVELYSR 207


>gi|121592837|ref|YP_984733.1| 30S ribosomal protein S4 [Acidovorax sp. JS42]
 gi|152060926|sp|A1W332|RS4_ACISJ RecName: Full=30S ribosomal protein S4
 gi|120604917|gb|ABM40657.1| SSU ribosomal protein S4P [Acidovorax sp. JS42]
          Length = 207

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 86/214 (40%), Positives = 132/214 (61%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S +GLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ A+R +G+T  NL+  LE RLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAAERLKGNTGANLLGLLECRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GDV+ V+ KSK+ A ++EA QLA++  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKAGDVVAVRDKSKKQARIVEALQLAQQVGMPVWVEVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D +  TF ++P   +   +   +  +L+VE YSR
Sbjct: 177 DKVEGTFKKVPDRDE---FGADINESLIVELYSR 207


>gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 EDL933]
 gi|15833415|ref|NP_312188.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. Sakai]
 gi|16131175|ref|NP_417755.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12
           substr. MG1655]
 gi|26249881|ref|NP_755921.1| 30S ribosomal protein S4 [Escherichia coli CFT073]
 gi|74313815|ref|YP_312234.1| 30S ribosomal protein S4 [Shigella sonnei Ss046]
 gi|82545659|ref|YP_409606.1| 30S ribosomal protein S4 [Shigella boydii Sb227]
 gi|82778592|ref|YP_404941.1| 30S ribosomal protein S4 [Shigella dysenteriae Sd197]
 gi|89110714|ref|AP_004494.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12
           substr. W3110]
 gi|91212723|ref|YP_542709.1| 30S ribosomal protein S4 [Escherichia coli UTI89]
 gi|110643535|ref|YP_671265.1| 30S ribosomal protein S4 [Escherichia coli 536]
 gi|110807144|ref|YP_690664.1| 30S ribosomal protein S4 [Shigella flexneri 5 str. 8401]
 gi|117625578|ref|YP_858901.1| 30S ribosomal protein S4 [Escherichia coli APEC O1]
 gi|157148871|ref|YP_001456190.1| 30S ribosomal protein S4 [Citrobacter koseri ATCC BAA-895]
 gi|157156792|ref|YP_001464764.1| 30S ribosomal protein S4 [Escherichia coli E24377A]
 gi|157162770|ref|YP_001460088.1| 30S ribosomal protein S4 [Escherichia coli HS]
 gi|161486375|ref|NP_839574.2| 30S ribosomal protein S4 [Shigella flexneri 2a str. 2457T]
 gi|168752255|ref|ZP_02777277.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4113]
 gi|168758524|ref|ZP_02783531.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4401]
 gi|168764979|ref|ZP_02789986.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4501]
 gi|168769158|ref|ZP_02794165.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4486]
 gi|168777846|ref|ZP_02802853.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4196]
 gi|168783864|ref|ZP_02808871.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4076]
 gi|168786186|ref|ZP_02811193.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC869]
 gi|168802725|ref|ZP_02827732.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC508]
 gi|170018468|ref|YP_001723422.1| 30S ribosomal protein S4 [Escherichia coli ATCC 8739]
 gi|170082816|ref|YP_001732136.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683332|ref|YP_001745558.1| 30S ribosomal protein S4 [Escherichia coli SMS-3-5]
 gi|170769606|ref|ZP_02904059.1| ribosomal protein S4 [Escherichia albertii TW07627]
 gi|187732648|ref|YP_001881981.1| 30S ribosomal protein S4 [Shigella boydii CDC 3083-94]
 gi|188495865|ref|ZP_03003135.1| ribosomal protein S4 [Escherichia coli 53638]
 gi|191174447|ref|ZP_03035948.1| ribosomal protein S4 [Escherichia coli F11]
 gi|193066487|ref|ZP_03047531.1| ribosomal protein S4 [Escherichia coli E22]
 gi|193071545|ref|ZP_03052454.1| ribosomal protein S4 [Escherichia coli E110019]
 gi|194430280|ref|ZP_03062775.1| ribosomal protein S4 [Escherichia coli B171]
 gi|194435081|ref|ZP_03067319.1| ribosomal protein S4 [Shigella dysenteriae 1012]
 gi|194439993|ref|ZP_03072051.1| ribosomal protein S4 [Escherichia coli 101-1]
 gi|195939844|ref|ZP_03085226.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. EC4024]
 gi|208806540|ref|ZP_03248877.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4206]
 gi|208812921|ref|ZP_03254250.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4045]
 gi|208819506|ref|ZP_03259826.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4042]
 gi|209396300|ref|YP_002272752.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4115]
 gi|209920762|ref|YP_002294846.1| 30S ribosomal protein S4 [Escherichia coli SE11]
 gi|215488596|ref|YP_002331027.1| 30S ribosomal protein S4 [Escherichia coli O127:H6 str. E2348/69]
 gi|217325090|ref|ZP_03441174.1| ribosomal protein S4 [Escherichia coli O157:H7 str. TW14588]
 gi|218550572|ref|YP_002384363.1| 30S ribosomal protein S4 [Escherichia fergusonii ATCC 35469]
 gi|218555854|ref|YP_002388767.1| 30S ribosomal protein S4 [Escherichia coli IAI1]
 gi|218560358|ref|YP_002393271.1| 30S ribosomal protein S4 [Escherichia coli S88]
 gi|218691583|ref|YP_002399795.1| 30S ribosomal protein S4 [Escherichia coli ED1a]
 gi|218696989|ref|YP_002404656.1| 30S ribosomal protein S4 [Escherichia coli 55989]
 gi|218702059|ref|YP_002409688.1| 30S ribosomal protein S4 [Escherichia coli IAI39]
 gi|218706904|ref|YP_002414423.1| 30S ribosomal protein S4 [Escherichia coli UMN026]
 gi|227883428|ref|ZP_04001233.1| 30S ribosomal protein S4 [Escherichia coli 83972]
 gi|237703026|ref|ZP_04533507.1| 30S ribosomal subunit protein S4 [Escherichia sp. 3_2_53FAA]
 gi|238902387|ref|YP_002928183.1| 30S ribosomal subunit protein S4 [Escherichia coli BW2952]
 gi|253771880|ref|YP_003034711.1| 30S ribosomal protein S4 [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254038457|ref|ZP_04872513.1| ribosomal protein S4 [Escherichia sp. 1_1_43]
 gi|254163224|ref|YP_003046332.1| 30S ribosomal protein S4 [Escherichia coli B str. REL606]
 gi|254795233|ref|YP_003080070.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. TW14359]
 gi|256020655|ref|ZP_05434520.1| 30S ribosomal protein S4 [Shigella sp. D9]
 gi|256025976|ref|ZP_05439841.1| 30S ribosomal protein S4 [Escherichia sp. 4_1_40B]
 gi|260846094|ref|YP_003223872.1| 30S ribosomal subunit protein S4 [Escherichia coli O103:H2 str.
           12009]
 gi|260857417|ref|YP_003231308.1| 30S ribosomal subunit protein S4 [Escherichia coli O26:H11 str.
           11368]
 gi|260870039|ref|YP_003236441.1| 30S ribosomal subunit protein S4 [Escherichia coli O111:H- str.
           11128]
 gi|261224601|ref|ZP_05938882.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254505|ref|ZP_05947038.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284654|ref|YP_003501472.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. CB9615]
 gi|293406893|ref|ZP_06650817.1| rpsD [Escherichia coli FVEC1412]
 gi|293412715|ref|ZP_06655383.1| 30S ribosomal protein S4 [Escherichia coli B354]
 gi|293416715|ref|ZP_06659352.1| 30S ribosomal protein S4 [Escherichia coli B185]
 gi|293453615|ref|ZP_06664034.1| 30S ribosomal protein S4 [Escherichia coli B088]
 gi|297517820|ref|ZP_06936206.1| 30S ribosomal protein S4 [Escherichia coli OP50]
 gi|298382634|ref|ZP_06992229.1| small subunit ribosomal protein S4 [Escherichia coli FVEC1302]
 gi|300815493|ref|ZP_07095718.1| ribosomal protein S4 [Escherichia coli MS 107-1]
 gi|300822900|ref|ZP_07103036.1| ribosomal protein S4 [Escherichia coli MS 119-7]
 gi|300896645|ref|ZP_07115161.1| ribosomal protein S4 [Escherichia coli MS 198-1]
 gi|300903545|ref|ZP_07121467.1| ribosomal protein S4 [Escherichia coli MS 84-1]
 gi|300918271|ref|ZP_07134875.1| ribosomal protein S4 [Escherichia coli MS 115-1]
 gi|300921894|ref|ZP_07138050.1| ribosomal protein S4 [Escherichia coli MS 182-1]
 gi|300932190|ref|ZP_07147469.1| ribosomal protein S4 [Escherichia coli MS 187-1]
 gi|300935295|ref|ZP_07150305.1| ribosomal protein S4 [Escherichia coli MS 21-1]
 gi|300946519|ref|ZP_07160784.1| ribosomal protein S4 [Escherichia coli MS 116-1]
 gi|300954829|ref|ZP_07167255.1| ribosomal protein S4 [Escherichia coli MS 175-1]
 gi|300973976|ref|ZP_07172383.1| ribosomal protein S4 [Escherichia coli MS 200-1]
 gi|300979869|ref|ZP_07174745.1| ribosomal protein S4 [Escherichia coli MS 45-1]
 gi|301018838|ref|ZP_07183082.1| ribosomal protein S4 [Escherichia coli MS 69-1]
 gi|301046068|ref|ZP_07193246.1| ribosomal protein S4 [Escherichia coli MS 185-1]
 gi|301305506|ref|ZP_07211598.1| ribosomal protein S4 [Escherichia coli MS 124-1]
 gi|301325136|ref|ZP_07218670.1| ribosomal protein S4 [Escherichia coli MS 78-1]
 gi|301643883|ref|ZP_07243914.1| ribosomal protein S4 [Escherichia coli MS 146-1]
 gi|306816361|ref|ZP_07450499.1| 30S ribosomal protein S4 [Escherichia coli NC101]
 gi|307139979|ref|ZP_07499335.1| 30S ribosomal protein S4 [Escherichia coli H736]
 gi|307315125|ref|ZP_07594708.1| ribosomal protein S4 [Escherichia coli W]
 gi|309794572|ref|ZP_07688994.1| ribosomal protein S4 [Escherichia coli MS 145-7]
 gi|331643992|ref|ZP_08345121.1| ribosomal protein S4 [Escherichia coli H736]
 gi|331649093|ref|ZP_08350179.1| ribosomal protein S4 [Escherichia coli M605]
 gi|331654889|ref|ZP_08355888.1| ribosomal protein S4 [Escherichia coli M718]
 gi|331659586|ref|ZP_08360524.1| ribosomal protein S4 [Escherichia coli TA206]
 gi|331664909|ref|ZP_08365810.1| ribosomal protein S4 [Escherichia coli TA143]
 gi|331670125|ref|ZP_08370964.1| ribosomal protein S4 [Escherichia coli TA271]
 gi|331674802|ref|ZP_08375559.1| ribosomal protein S4 [Escherichia coli TA280]
 gi|331679365|ref|ZP_08380035.1| ribosomal protein S4 [Escherichia coli H591]
 gi|331684938|ref|ZP_08385524.1| ribosomal protein S4 [Escherichia coli H299]
 gi|62288978|sp|P0A7V8|RS4_ECOLI RecName: Full=30S ribosomal protein S4
 gi|62288979|sp|P0A7V9|RS4_ECOL6 RecName: Full=30S ribosomal protein S4
 gi|62288980|sp|P0A7W0|RS4_ECO57 RecName: Full=30S ribosomal protein S4
 gi|90101715|sp|Q31VY0|RS4_SHIBS RecName: Full=30S ribosomal protein S4
 gi|90101716|sp|Q32B55|RS4_SHIDS RecName: Full=30S ribosomal protein S4
 gi|90101726|sp|Q3YWW3|RS4_SHISS RecName: Full=30S ribosomal protein S4
 gi|122957945|sp|Q0TCG5|RS4_ECOL5 RecName: Full=30S ribosomal protein S4
 gi|123047859|sp|Q0T006|RS4_SHIF8 RecName: Full=30S ribosomal protein S4
 gi|123387796|sp|Q1R636|RS4_ECOUT RecName: Full=30S ribosomal protein S4
 gi|152060947|sp|A1AGI7|RS4_ECOK1 RecName: Full=30S ribosomal protein S4
 gi|171855222|sp|A7ZSI5|RS4_ECO24 RecName: Full=30S ribosomal protein S4
 gi|172044361|sp|A8A5A1|RS4_ECOHS RecName: Full=30S ribosomal protein S4
 gi|172045593|sp|A8AQJ1|RS4_CITK8 RecName: Full=30S ribosomal protein S4
 gi|189045379|sp|B1IQ03|RS4_ECOLC RecName: Full=30S ribosomal protein S4
 gi|226695077|sp|B2U2R5|RS4_SHIB3 RecName: Full=30S ribosomal protein S4
 gi|226699056|sp|B7NLL6|RS4_ECO7I RecName: Full=30S ribosomal protein S4
 gi|226699057|sp|B7M102|RS4_ECO8A RecName: Full=30S ribosomal protein S4
 gi|226699058|sp|B1X6E8|RS4_ECODH RecName: Full=30S ribosomal protein S4
 gi|226699059|sp|B7NDR8|RS4_ECOLU RecName: Full=30S ribosomal protein S4
 gi|226699060|sp|B6I210|RS4_ECOSE RecName: Full=30S ribosomal protein S4
 gi|226699061|sp|B1LHB0|RS4_ECOSM RecName: Full=30S ribosomal protein S4
 gi|226699064|sp|B7LRR3|RS4_ESCF3 RecName: Full=30S ribosomal protein S4
 gi|226732180|sp|B7MCR2|RS4_ECO45 RecName: Full=30S ribosomal protein S4
 gi|226732181|sp|B5YT15|RS4_ECO5E RecName: Full=30S ribosomal protein S4
 gi|254764587|sp|B7UK20|RS4_ECO27 RecName: Full=30S ribosomal protein S4
 gi|254764588|sp|B7LHZ8|RS4_ECO55 RecName: Full=30S ribosomal protein S4
 gi|254764589|sp|B7N181|RS4_ECO81 RecName: Full=30S ribosomal protein S4
 gi|259495276|sp|C4ZUF1|RS4_ECOBW RecName: Full=30S ribosomal protein S4
 gi|116666551|pdb|1VS5|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|116666603|pdb|1VS7|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|256032366|pdb|3E1A|R Chain R, Structure Of The 30s Subunit And The Trnas Of E. Coli
           Ribosome In Pre-Accommodation State
 gi|256032423|pdb|3E1C|R Chain R, Structure Of The 30s Subunit And The Trnas Of E. Coli
           Ribosome In Post-Accommodation State
 gi|257097325|pdb|3I1M|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097377|pdb|3I1O|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097429|pdb|3I1Q|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097483|pdb|3I1S|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097537|pdb|3I1Z|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097592|pdb|3I21|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|290560310|pdb|3KC4|D Chain D, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
           Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
           In Pdb Entry 3kcr
 gi|308198690|pdb|3OR9|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 30s Subunit Of The First
           70s Ribosome.
 gi|308198711|pdb|3ORA|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 30s Subunit Of The
           Second 70s Ribosome.
 gi|326634282|pdb|3IZV|H Chain H, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding. This Entry Contains The
           Small Subunit Of A Ribosome Programmed With A
           Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
           Ef-Tu
 gi|326634307|pdb|3IZW|H Chain H, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding.This Entry Contains The
           Small Subunit Of A Ribosome Programmed With A Cognate
           Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
 gi|12517925|gb|AAG58417.1|AE005556_10 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str.
           EDL933]
 gi|26110309|gb|AAN82495.1|AE016767_255 30S ribosomal protein S4 [Escherichia coli CFT073]
 gi|42798|emb|CAA26394.1| unnamed protein product [Escherichia coli]
 gi|606231|gb|AAA58094.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12
           substr. MG1655]
 gi|1789691|gb|AAC76321.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13363634|dbj|BAB37584.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str.
           Sakai]
 gi|73857292|gb|AAZ89999.1| 30S ribosomal subunit protein S4 [Shigella sonnei Ss046]
 gi|81242740|gb|ABB63450.1| 30S ribosomal subunit protein S4 [Shigella dysenteriae Sd197]
 gi|81247070|gb|ABB67778.1| 30S ribosomal subunit protein S4 [Shigella boydii Sb227]
 gi|85676745|dbj|BAE77995.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K12 substr.
           W3110]
 gi|91074297|gb|ABE09178.1| 30S ribosomal subunit protein S4 [Escherichia coli UTI89]
 gi|110345127|gb|ABG71364.1| 30S ribosomal protein S4 [Escherichia coli 536]
 gi|110616692|gb|ABF05359.1| 30S ribosomal subunit protein S4 [Shigella flexneri 5 str. 8401]
 gi|115514702|gb|ABJ02777.1| 30S ribosomal subunit protein S4 [Escherichia coli APEC O1]
 gi|157068450|gb|ABV07705.1| ribosomal protein S4 [Escherichia coli HS]
 gi|157078822|gb|ABV18530.1| ribosomal protein S4 [Escherichia coli E24377A]
 gi|157086076|gb|ABV15754.1| hypothetical protein CKO_04709 [Citrobacter koseri ATCC BAA-895]
 gi|169753396|gb|ACA76095.1| ribosomal protein S4 [Escherichia coli ATCC 8739]
 gi|169890651|gb|ACB04358.1| 30S ribosomal subunit protein S4 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170121663|gb|EDS90594.1| ribosomal protein S4 [Escherichia albertii TW07627]
 gi|170521050|gb|ACB19228.1| ribosomal protein S4 [Escherichia coli SMS-3-5]
 gi|187429640|gb|ACD08914.1| ribosomal protein S4 [Shigella boydii CDC 3083-94]
 gi|187767007|gb|EDU30851.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4196]
 gi|188013855|gb|EDU51977.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4113]
 gi|188491064|gb|EDU66167.1| ribosomal protein S4 [Escherichia coli 53638]
 gi|188998873|gb|EDU67859.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4076]
 gi|189354671|gb|EDU73090.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4401]
 gi|189361855|gb|EDU80274.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4486]
 gi|189365129|gb|EDU83545.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4501]
 gi|189374088|gb|EDU92504.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC869]
 gi|189375351|gb|EDU93767.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC508]
 gi|190905255|gb|EDV64893.1| ribosomal protein S4 [Escherichia coli F11]
 gi|192925868|gb|EDV80518.1| ribosomal protein S4 [Escherichia coli E22]
 gi|192955133|gb|EDV85627.1| ribosomal protein S4 [Escherichia coli E110019]
 gi|194411669|gb|EDX27996.1| ribosomal protein S4 [Escherichia coli B171]
 gi|194416688|gb|EDX32819.1| ribosomal protein S4 [Shigella dysenteriae 1012]
 gi|194421045|gb|EDX37074.1| ribosomal protein S4 [Escherichia coli 101-1]
 gi|208726341|gb|EDZ75942.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4206]
 gi|208734198|gb|EDZ82885.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4045]
 gi|208739629|gb|EDZ87311.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4042]
 gi|209157700|gb|ACI35133.1| ribosomal protein S4 [Escherichia coli O157:H7 str. EC4115]
 gi|209757278|gb|ACI76951.1| 30S ribosomal subunit protein S4 [Escherichia coli]
 gi|209757280|gb|ACI76952.1| 30S ribosomal subunit protein S4 [Escherichia coli]
 gi|209757282|gb|ACI76953.1| 30S ribosomal subunit protein S4 [Escherichia coli]
 gi|209757284|gb|ACI76954.1| 30S ribosomal subunit protein S4 [Escherichia coli]
 gi|209757286|gb|ACI76955.1| 30S ribosomal subunit protein S4 [Escherichia coli]
 gi|209914021|dbj|BAG79095.1| 30S ribosomal protein S4 [Escherichia coli SE11]
 gi|215266668|emb|CAS11107.1| 30S ribosomal subunit protein S4 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217321311|gb|EEC29735.1| ribosomal protein S4 [Escherichia coli O157:H7 str. TW14588]
 gi|218353721|emb|CAU99998.1| 30S ribosomal subunit protein S4 [Escherichia coli 55989]
 gi|218358113|emb|CAQ90760.1| 30S ribosomal subunit protein S4 [Escherichia fergusonii ATCC
           35469]
 gi|218362622|emb|CAR00248.1| 30S ribosomal subunit protein S4 [Escherichia coli IAI1]
 gi|218367127|emb|CAR04901.1| 30S ribosomal subunit protein S4 [Escherichia coli S88]
 gi|218372045|emb|CAR19905.1| 30S ribosomal subunit protein S4 [Escherichia coli IAI39]
 gi|218429147|emb|CAR10099.2| 30S ribosomal subunit protein S4 [Escherichia coli ED1a]
 gi|218434001|emb|CAR14918.1| 30S ribosomal subunit protein S4 [Escherichia coli UMN026]
 gi|222035005|emb|CAP77748.1| 30S ribosomal protein S4 [Escherichia coli LF82]
 gi|226838963|gb|EEH70986.1| ribosomal protein S4 [Escherichia sp. 1_1_43]
 gi|226902290|gb|EEH88549.1| 30S ribosomal subunit protein S4 [Escherichia sp. 3_2_53FAA]
 gi|227839572|gb|EEJ50038.1| 30S ribosomal protein S4 [Escherichia coli 83972]
 gi|238859799|gb|ACR61797.1| 30S ribosomal subunit protein S4 [Escherichia coli BW2952]
 gi|242378823|emb|CAQ33615.1| 30S ribosomal subunit protein S4, subunit of 30S ribosomal subunit
           and ribosome [Escherichia coli BL21(DE3)]
 gi|253322924|gb|ACT27526.1| ribosomal protein S4 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975125|gb|ACT40796.1| 30S ribosomal protein S4 [Escherichia coli B str. REL606]
 gi|253979281|gb|ACT44951.1| 30S ribosomal protein S4 [Escherichia coli BL21(DE3)]
 gi|254594633|gb|ACT73994.1| 30S ribosomal subunit protein S4 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756066|dbj|BAI27568.1| 30S ribosomal subunit protein S4 [Escherichia coli O26:H11 str.
           11368]
 gi|257761241|dbj|BAI32738.1| 30S ribosomal subunit protein S4 [Escherichia coli O103:H2 str.
           12009]
 gi|257766395|dbj|BAI37890.1| 30S ribosomal subunit protein S4 [Escherichia coli O111:H- str.
           11128]
 gi|260447685|gb|ACX38107.1| ribosomal protein S4 [Escherichia coli DH1]
 gi|281180331|dbj|BAI56661.1| 30S ribosomal protein S4 [Escherichia coli SE15]
 gi|281602661|gb|ADA75645.1| 30S ribosomal protein S4 [Shigella flexneri 2002017]
 gi|284923302|emb|CBG36396.1| 30S ribosomal subunit protein S4 [Escherichia coli 042]
 gi|290764527|gb|ADD58488.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. CB9615]
 gi|291321741|gb|EFE61172.1| 30S ribosomal protein S4 [Escherichia coli B088]
 gi|291425704|gb|EFE98738.1| rpsD [Escherichia coli FVEC1412]
 gi|291431291|gb|EFF04276.1| 30S ribosomal protein S4 [Escherichia coli B185]
 gi|291468362|gb|EFF10855.1| 30S ribosomal protein S4 [Escherichia coli B354]
 gi|294491877|gb|ADE90633.1| ribosomal protein S4 [Escherichia coli IHE3034]
 gi|298276470|gb|EFI17988.1| small subunit ribosomal protein S4 [Escherichia coli FVEC1302]
 gi|300301894|gb|EFJ58279.1| ribosomal protein S4 [Escherichia coli MS 185-1]
 gi|300308986|gb|EFJ63506.1| ribosomal protein S4 [Escherichia coli MS 200-1]
 gi|300318229|gb|EFJ68013.1| ribosomal protein S4 [Escherichia coli MS 175-1]
 gi|300359476|gb|EFJ75346.1| ribosomal protein S4 [Escherichia coli MS 198-1]
 gi|300399548|gb|EFJ83086.1| ribosomal protein S4 [Escherichia coli MS 69-1]
 gi|300404418|gb|EFJ87956.1| ribosomal protein S4 [Escherichia coli MS 84-1]
 gi|300409380|gb|EFJ92918.1| ribosomal protein S4 [Escherichia coli MS 45-1]
 gi|300414532|gb|EFJ97842.1| ribosomal protein S4 [Escherichia coli MS 115-1]
 gi|300421742|gb|EFK05053.1| ribosomal protein S4 [Escherichia coli MS 182-1]
 gi|300453765|gb|EFK17385.1| ribosomal protein S4 [Escherichia coli MS 116-1]
 gi|300459451|gb|EFK22944.1| ribosomal protein S4 [Escherichia coli MS 21-1]
 gi|300460014|gb|EFK23507.1| ribosomal protein S4 [Escherichia coli MS 187-1]
 gi|300524666|gb|EFK45735.1| ribosomal protein S4 [Escherichia coli MS 119-7]
 gi|300532385|gb|EFK53447.1| ribosomal protein S4 [Escherichia coli MS 107-1]
 gi|300839201|gb|EFK66961.1| ribosomal protein S4 [Escherichia coli MS 124-1]
 gi|300848015|gb|EFK75775.1| ribosomal protein S4 [Escherichia coli MS 78-1]
 gi|301077786|gb|EFK92592.1| ribosomal protein S4 [Escherichia coli MS 146-1]
 gi|305850757|gb|EFM51214.1| 30S ribosomal protein S4 [Escherichia coli NC101]
 gi|306905474|gb|EFN36009.1| ribosomal protein S4 [Escherichia coli W]
 gi|307555384|gb|ADN48159.1| 30S ribosomal subunit protein S4 [Escherichia coli ABU 83972]
 gi|307628331|gb|ADN72635.1| 30S ribosomal protein S4 [Escherichia coli UM146]
 gi|308121622|gb|EFO58884.1| ribosomal protein S4 [Escherichia coli MS 145-7]
 gi|309703708|emb|CBJ03049.1| 30S ribosomal subunit protein S4 [Escherichia coli ETEC H10407]
 gi|312947847|gb|ADR28674.1| 30S ribosomal protein S4 [Escherichia coli O83:H1 str. NRG 857C]
 gi|315062588|gb|ADT76915.1| 30S ribosomal subunit protein S4 [Escherichia coli W]
 gi|315137871|dbj|BAJ45030.1| 30S ribosomal protein S4 [Escherichia coli DH1]
 gi|315255880|gb|EFU35848.1| ribosomal protein S4 [Escherichia coli MS 85-1]
 gi|315284628|gb|EFU44073.1| ribosomal protein S4 [Escherichia coli MS 110-3]
 gi|315292386|gb|EFU51738.1| ribosomal protein S4 [Escherichia coli MS 153-1]
 gi|315298595|gb|EFU57850.1| ribosomal protein S4 [Escherichia coli MS 16-3]
 gi|320182706|gb|EFW57592.1| SSU ribosomal protein S4p (S9e) [Shigella boydii ATCC 9905]
 gi|320639601|gb|EFX09195.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. G5101]
 gi|320645099|gb|EFX14115.1| 30S ribosomal protein S4 [Escherichia coli O157:H- str. 493-89]
 gi|320650410|gb|EFX18876.1| 30S ribosomal protein S4 [Escherichia coli O157:H- str. H 2687]
 gi|320655935|gb|EFX23855.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661387|gb|EFX28802.1| 30S ribosomal protein S4 [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666409|gb|EFX33392.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 str. LSU-61]
 gi|323162975|gb|EFZ48810.1| ribosomal protein S4 [Escherichia coli E128010]
 gi|323173932|gb|EFZ59560.1| ribosomal protein S4 [Escherichia coli LT-68]
 gi|323189099|gb|EFZ74383.1| ribosomal protein S4 [Escherichia coli RN587/1]
 gi|323376825|gb|ADX49093.1| ribosomal protein S4 [Escherichia coli KO11]
 gi|323934505|gb|EGB30913.1| ribosomal protein S4 [Escherichia coli E1520]
 gi|323939282|gb|EGB35494.1| ribosomal protein S4 [Escherichia coli E482]
 gi|323944283|gb|EGB40359.1| ribosomal protein S4 [Escherichia coli H120]
 gi|323950210|gb|EGB46092.1| ribosomal protein S4 [Escherichia coli H252]
 gi|323954581|gb|EGB50364.1| ribosomal protein S4 [Escherichia coli H263]
 gi|323959553|gb|EGB55206.1| ribosomal protein S4 [Escherichia coli H489]
 gi|323966258|gb|EGB61693.1| ribosomal protein S4 [Escherichia coli M863]
 gi|323970100|gb|EGB65374.1| ribosomal protein S4 [Escherichia coli TA007]
 gi|323974751|gb|EGB69864.1| ribosomal protein S4 [Escherichia coli TW10509]
 gi|324009031|gb|EGB78250.1| ribosomal protein S4 [Escherichia coli MS 57-2]
 gi|324014913|gb|EGB84132.1| ribosomal protein S4 [Escherichia coli MS 60-1]
 gi|324017885|gb|EGB87104.1| ribosomal protein S4 [Escherichia coli MS 117-3]
 gi|324111975|gb|EGC05954.1| ribosomal protein S4 [Escherichia fergusonii B253]
 gi|324116314|gb|EGC10234.1| ribosomal protein S4 [Escherichia coli E1167]
 gi|327250944|gb|EGE62637.1| ribosomal protein S4 [Escherichia coli STEC_7v]
 gi|331036286|gb|EGI08512.1| ribosomal protein S4 [Escherichia coli H736]
 gi|331041591|gb|EGI13735.1| ribosomal protein S4 [Escherichia coli M605]
 gi|331046904|gb|EGI18982.1| ribosomal protein S4 [Escherichia coli M718]
 gi|331052801|gb|EGI24834.1| ribosomal protein S4 [Escherichia coli TA206]
 gi|331057419|gb|EGI29405.1| ribosomal protein S4 [Escherichia coli TA143]
 gi|331062187|gb|EGI34107.1| ribosomal protein S4 [Escherichia coli TA271]
 gi|331067711|gb|EGI39109.1| ribosomal protein S4 [Escherichia coli TA280]
 gi|331072537|gb|EGI43862.1| ribosomal protein S4 [Escherichia coli H591]
 gi|331077309|gb|EGI48521.1| ribosomal protein S4 [Escherichia coli H299]
 gi|332090406|gb|EGI95504.1| ribosomal protein S4 [Shigella boydii 3594-74]
 gi|332104203|gb|EGJ07549.1| 30S ribosomal subunit protein S4 [Shigella sp. D9]
          Length = 206

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206


>gi|288553742|ref|YP_003425677.1| 30S ribosomal protein S4 [Bacillus pseudofirmus OF4]
 gi|288544902|gb|ADC48785.1| 30S ribosomal protein S4 [Bacillus pseudofirmus OF4]
          Length = 200

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LAKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G ++E++FR IF +A +  G    N +  LESRLD +VYR     T  AARQ VNH H
Sbjct: 60  MFG-VNERQFRRIFDDAGKMPGIHGENFMILLESRLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I +++KS+ L+ V EA +  +   P Y++ + + +  TF 
Sbjct: 119 IMVDGGRVDIPSYRVKPGQTIALREKSRDLSVVKEALEANDFT-PAYVTFDAEKLEGTFS 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEITEALIVEFYSR 200


>gi|194017389|ref|ZP_03056001.1| ribosomal protein S4 [Bacillus pumilus ATCC 7061]
 gi|194011257|gb|EDW20827.1| ribosomal protein S4 [Bacillus pumilus ATCC 7061]
          Length = 200

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKISRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +AD+  G    N +  LE+RLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRTLFDKADKLPGKQGENFMILLETRLDNLVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I S+  K G  I +++KS+ LA V E+ ++    VPEY++ + + +  TF 
Sbjct: 119 ILVDGSRVDIPSFSVKPGQTIALREKSQNLAVVKESVEV-NSFVPEYLTFDAEKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VEFYSR
Sbjct: 178 RLPERSELAP---EISEQLIVEFYSR 200


>gi|237728631|ref|ZP_04559112.1| ribosomal protein S4 [Citrobacter sp. 30_2]
 gi|283835713|ref|ZP_06355454.1| hypothetical protein CIT292_10106 [Citrobacter youngae ATCC 29220]
 gi|226909253|gb|EEH95171.1| ribosomal protein S4 [Citrobacter sp. 30_2]
 gi|291068393|gb|EFE06502.1| ribosomal protein S4 [Citrobacter youngae ATCC 29220]
          Length = 206

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLGLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206


>gi|260592739|ref|ZP_05858197.1| ribosomal protein S4 [Prevotella veroralis F0319]
 gi|288803959|ref|ZP_06409382.1| ribosomal protein S4 [Prevotella melaninogenica D18]
 gi|302345100|ref|YP_003813453.1| ribosomal protein S4 [Prevotella melaninogenica ATCC 25845]
 gi|260535270|gb|EEX17887.1| ribosomal protein S4 [Prevotella veroralis F0319]
 gi|288333592|gb|EFC72044.1| ribosomal protein S4 [Prevotella melaninogenica D18]
 gi|302149280|gb|ADK95542.1| ribosomal protein S4 [Prevotella melaninogenica ATCC 25845]
          Length = 202

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 116/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  +  R++ PG HG  R+ K S +G QL  KQK K 
Sbjct: 1   MARYIGPKSRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F +A ++ G T   L+  LESRLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-ERQFRNLFDKAAKAEGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNG  VNI SY+ K GDV+ V++K+K L  +  A          ++  + +     F+
Sbjct: 119 IVVNGNVVNIASYQVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDDNAKCGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201


>gi|238921420|ref|YP_002934935.1| 30S ribosomal protein S4 [Edwardsiella ictaluri 93-146]
 gi|269140550|ref|YP_003297251.1| 30S ribosomal protein S4 [Edwardsiella tarda EIB202]
 gi|294638030|ref|ZP_06716290.1| ribosomal protein S4 [Edwardsiella tarda ATCC 23685]
 gi|259495277|sp|C5BF28|RS4_EDWI9 RecName: Full=30S ribosomal protein S4
 gi|238870989|gb|ACR70700.1| 30S ribosomal protein S4 (BS4) [Edwardsiella ictaluri 93-146]
 gi|267986211|gb|ACY86040.1| 30S ribosomal protein S4 [Edwardsiella tarda EIB202]
 gi|291088822|gb|EFE21383.1| ribosomal protein S4 [Edwardsiella tarda ATCC 23685]
 gi|304560335|gb|ADM42999.1| SSU ribosomal protein S4p (S9e) [Edwardsiella tarda FL6-60]
          Length = 206

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ V++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIVVNGRVVNIASYQVSPNDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +  +L+VE YS+
Sbjct: 179 EGVFKRQPERSD---LSADINEHLIVELYSK 206


>gi|160896494|ref|YP_001562076.1| 30S ribosomal protein S4 [Delftia acidovorans SPH-1]
 gi|226697834|sp|A9BRX4|RS4_DELAS RecName: Full=30S ribosomal protein S4
 gi|160362078|gb|ABX33691.1| ribosomal protein S4 [Delftia acidovorans SPH-1]
          Length = 207

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        KS  +T+   PG HG+    + S FGLQLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSIADKSKFDTK---PGQHGRTSGQRTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ AD+ +G+T  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAADKKKGNTGANLLSLLESRLDNVVYRMGFGSTRSEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GDV+ V++KSK+ A ++EA QLA +   P ++ V+ 
Sbjct: 117 QLVSHKAITVNGQSVNIPSYMVKVGDVVAVREKSKKQARIVEALQLAGQVGFPAWVEVSA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D    TF + P   +   +   +  +L+VE YSR
Sbjct: 177 DKAEGTFKKSPDRDE---FGADINESLIVELYSR 207


>gi|262280201|ref|ZP_06057985.1| 30S ribosomal protein S4 [Acinetobacter calcoaceticus RUH2202]
 gi|262257979|gb|EEY76713.1| 30S ribosomal protein S4 [Acinetobacter calcoaceticus RUH2202]
          Length = 208

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRIYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P ++ V+H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMDVDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRAD---LPAEINESLIVELYSK 208


>gi|167036828|ref|YP_001664406.1| 30S ribosomal protein S4 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039547|ref|YP_001662532.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X514]
 gi|256752659|ref|ZP_05493511.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1]
 gi|300915202|ref|ZP_07132517.1| ribosomal protein S4 [Thermoanaerobacter sp. X561]
 gi|307725126|ref|YP_003904877.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X513]
 gi|320115250|ref|YP_004185409.1| 30S ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226695091|sp|B0KCM7|RS4_THEP3 RecName: Full=30S ribosomal protein S4
 gi|226695092|sp|B0K5S0|RS4_THEPX RecName: Full=30S ribosomal protein S4
 gi|166853787|gb|ABY92196.1| RNA-binding S4 domain protein [Thermoanaerobacter sp. X514]
 gi|166855662|gb|ABY94070.1| RNA-binding S4 domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|256748479|gb|EEU61531.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1]
 gi|300888926|gb|EFK84073.1| ribosomal protein S4 [Thermoanaerobacter sp. X561]
 gi|307582187|gb|ADN55586.1| ribosomal protein S4 [Thermoanaerobacter sp. X513]
 gi|319928341|gb|ADV79026.1| ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 206

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 126/212 (59%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +       K P   R Y PG HGQ +K K + +G+QLR 
Sbjct: 1   MGRYTGPTCRLCRREGMKLYLKGDKCYTDKCPFARRGYAPGQHGQEKK-KLTNYGMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+YYG + E++F  +++EA+R +G T  NL+  LE RLD +V+R  F  +   ARQ
Sbjct: 60  KQKLKRYYGVL-ERQFERLYEEAERMKGITGENLLQLLERRLDNVVFRLGFAASRPQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V+H H+ VNG+ V+I S+  K GDVI V++KS+ +  +    +++ R+VP+++ +N D 
Sbjct: 119 LVSHGHIEVNGKKVDIPSFLVKPGDVISVREKSRSMELIKNNLEVS-RNVPDWLELNKDA 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V +P   + +  P  +Q +L+VE YS+
Sbjct: 178 FEGRVVSLP-RREHIDLP--IQEHLIVELYSK 206


>gi|53715440|ref|YP_101432.1| 30S ribosomal protein S4 [Bacteroides fragilis YCH46]
 gi|60683412|ref|YP_213556.1| 30S ribosomal protein S4 [Bacteroides fragilis NCTC 9343]
 gi|265767574|ref|ZP_06095240.1| ribosomal protein S4 [Bacteroides sp. 2_1_16]
 gi|61215469|sp|Q64NN4|RS4_BACFR RecName: Full=30S ribosomal protein S4
 gi|81313536|sp|Q5L8D5|RS4_BACFN RecName: Full=30S ribosomal protein S4
 gi|52218305|dbj|BAD50898.1| 30S ribosomal protein S4 [Bacteroides fragilis YCH46]
 gi|60494846|emb|CAH09653.1| putative 30S ribosomal protein S4 [Bacteroides fragilis NCTC 9343]
 gi|263252879|gb|EEZ24391.1| ribosomal protein S4 [Bacteroides sp. 2_1_16]
 gi|301164897|emb|CBW24458.1| putative 30S ribosomal protein S4 [Bacteroides fragilis 638R]
          Length = 201

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD IV+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQMLEGRLDNIVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G +I V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGQVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|172044373|sp|A4JAR5|RS4_BURVG RecName: Full=30S ribosomal protein S4
          Length = 207

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GDVI +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDVIAIREKAKKQARIIEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207


>gi|282858349|ref|ZP_06267529.1| ribosomal protein S4 [Prevotella bivia JCVIHMP010]
 gi|282588797|gb|EFB93922.1| ribosomal protein S4 [Prevotella bivia JCVIHMP010]
          Length = 201

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  +  R++ PG HG  R+ K S +G QL  KQK K 
Sbjct: 1   MARYIGPKTRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A +S G T   L+  LE+RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNLFEKAAKSSGITGEVLLQSLEARLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG  VNI SY  K GDV+ V++K+K L  +  A          ++  + +     F+
Sbjct: 119 ITVNGDVVNIASYNVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENAKAGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201


>gi|307132815|ref|YP_003884831.1| 30S ribosomal subunit protein S4 [Dickeya dadantii 3937]
 gi|306530344|gb|ADN00275.1| 30S ribosomal subunit protein S4 [Dickeya dadantii 3937]
          Length = 206

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|194290998|ref|YP_002006905.1| 30S ribosomal protein s4 [Cupriavidus taiwanensis LMG 19424]
 gi|226697831|sp|B3R7E4|RS4_CUPTR RecName: Full=30S ribosomal protein S4
 gi|193224833|emb|CAQ70844.1| 30S ribosomal subunit protein S4 [Cupriavidus taiwanensis LMG
           19424]
          Length = 207

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSSRRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDVI ++++SK+   + EA  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQTLNVPSAQIKSGDVITIREQSKKQVRIAEALSLAEQSGFPTWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPDRAD---ISGDINESLIVELYSR 207


>gi|310815406|ref|YP_003963370.1| ribosomal protein S4 [Ketogulonicigenium vulgare Y25]
 gi|308754141|gb|ADO42070.1| ribosomal protein S4 [Ketogulonicigenium vulgare Y25]
          Length = 192

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 131/192 (68%), Positives = 159/192 (82%), Gaps = 1/192 (0%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +GEN+WGRPKSP+N R YGPG HGQRRK K S FG QLRAKQK+K YYGD++EK+FR I+
Sbjct: 1   MGENIWGRPKSPLNRREYGPGQHGQRRKGKLSDFGTQLRAKQKLKGYYGDLTEKQFRRIY 60

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
            +A+R++GDT  NL+  LE RLD +VYRAK+V T+FAARQFVNH HV VNG SVNI SYR
Sbjct: 61  SDAERTKGDTGENLVGLLERRLDAVVYRAKWVATVFAARQFVNHGHVTVNGVSVNIPSYR 120

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
            KEGDVIE++ KSKQLA VLEA  LAER+VP+YI V++  + AT+VR PS L DVPYPVI
Sbjct: 121 VKEGDVIEIRAKSKQLAVVLEAINLAERNVPDYIEVDNSKLTATYVRTPS-LADVPYPVI 179

Query: 195 MQPNLVVEFYSR 206
           M+PNL+VEFY++
Sbjct: 180 MEPNLIVEFYAK 191


>gi|172059366|ref|YP_001807018.1| 30S ribosomal protein S4 [Burkholderia ambifaria MC40-6]
 gi|226697813|sp|B1YRQ4|RS4_BURA4 RecName: Full=30S ribosomal protein S4
 gi|171991883|gb|ACB62802.1| ribosomal protein S4 [Burkholderia ambifaria MC40-6]
          Length = 207

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GDV+ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207


>gi|85713166|ref|ZP_01044198.1| 30S ribosomal protein S4 [Idiomarina baltica OS145]
 gi|85693036|gb|EAQ31002.1| 30S ribosomal protein S4 [Idiomarina baltica OS145]
          Length = 206

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIETAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARIKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNG+ VNI S+  +  DV+ V++K+K+ A +  A +L+E R+ P ++ V+   M
Sbjct: 119 SHKAVVVNGQVVNIPSFMVRPEDVVSVREKAKKQARISAALELSEQREKPVWLEVDSSKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGQFKRLPERSD---LSAEINEQLIVELYSK 206


>gi|253566696|ref|ZP_04844149.1| 30S ribosomal protein S4 [Bacteroides sp. 3_2_5]
 gi|251944868|gb|EES85343.1| 30S ribosomal protein S4 [Bacteroides sp. 3_2_5]
          Length = 201

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD IV+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQMLEGRLDNIVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G +I V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGQVVNIPSYVVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|329956728|ref|ZP_08297301.1| ribosomal protein S4 [Bacteroides clarus YIT 12056]
 gi|328524100|gb|EGF51176.1| ribosomal protein S4 [Bacteroides clarus YIT 12056]
          Length = 201

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VN+ SY  K G VI V+++SK L  +  +          ++  + +  V   +
Sbjct: 119 ITVDGEVVNVPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNAKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|78064949|ref|YP_367718.1| 30S ribosomal protein S4 [Burkholderia sp. 383]
 gi|90101679|sp|Q39KE2|RS4_BURS3 RecName: Full=30S ribosomal protein S4
 gi|77965694|gb|ABB07074.1| SSU ribosomal protein S4P [Burkholderia sp. 383]
          Length = 207

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GDV+ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKSGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P   +       +  +L+VE YSR
Sbjct: 177 KKFEGTFKQMPERAE---IAGDINESLIVELYSR 207


>gi|320540587|ref|ZP_08040237.1| 30S ribosomal subunit protein S4 [Serratia symbiotica str. Tucson]
 gi|320029518|gb|EFW11547.1| 30S ribosomal subunit protein S4 [Serratia symbiotica str. Tucson]
          Length = 206

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKASLELAEQREKPTWLEVDALKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|317049816|ref|YP_004117464.1| 30S ribosomal protein S4 [Pantoea sp. At-9b]
 gi|316951433|gb|ADU70908.1| ribosomal protein S4 [Pantoea sp. At-9b]
          Length = 206

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKSILVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|270264349|ref|ZP_06192615.1| 30S ribosomal protein S4 [Serratia odorifera 4Rx13]
 gi|270041485|gb|EFA14583.1| 30S ribosomal protein S4 [Serratia odorifera 4Rx13]
          Length = 206

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKASLELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRMPERTD---LSADINEHLIVELYSK 206


>gi|259909976|ref|YP_002650332.1| 30S ribosomal protein S4 [Erwinia pyrifoliae Ep1/96]
 gi|292489825|ref|YP_003532715.1| 30S ribosomal protein S4 [Erwinia amylovora CFBP1430]
 gi|292900867|ref|YP_003540236.1| 30S ribosomal protein S4 [Erwinia amylovora ATCC 49946]
 gi|224965598|emb|CAX57130.1| 30S ribosomal protein S4 [Erwinia pyrifoliae Ep1/96]
 gi|283480075|emb|CAY75991.1| 30S ribosomal protein S4 [Erwinia pyrifoliae DSM 12163]
 gi|291200715|emb|CBJ47848.1| 30S ribosomal subunit protein S4 [Erwinia amylovora ATCC 49946]
 gi|291555262|emb|CBA23541.1| 30S ribosomal protein S4 [Erwinia amylovora CFBP1430]
 gi|312174007|emb|CBX82260.1| 30S ribosomal protein S4 [Erwinia amylovora ATCC BAA-2158]
          Length = 206

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR V+I SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKSIMVNGRVVSIASYQVTPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|188584864|ref|YP_001916409.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|226699094|sp|B2A4P9|RS4_NATTJ RecName: Full=30S ribosomal protein S4
 gi|179349551|gb|ACB83821.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 209

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++ +    ++ RR G  L+ +       K  ++ ++Y PG HG  R+SK S +G+QLR 
Sbjct: 1   MARYQGPVCRLCRREGTKLFLKGERCYTDKCAIDKKAYAPGQHGPTRRSKQSEYGMQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + E +FR  F+EADR +G T   L+  LE+RLD +VYR  F  +   ARQ
Sbjct: 61  KQKARRIYGVL-ENQFRRYFREADRKKGITGQTLLRLLETRLDNVVYRMGFAASRAEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
           FVNH H++VNG+ VN+ SY  K GD + V++KS+ +  V E  +LAE   VPE++  +H+
Sbjct: 120 FVNHGHIMVNGKRVNVASYEVKPGDEVVVREKSRDIPRVQELKELAEGYRVPEWLEADHE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N     VR P   +     V ++ +L+VE YSR
Sbjct: 180 NFTGRVVRYPEREE---IDVPVEEHLIVELYSR 209


>gi|330722391|gb|EGH00239.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC2047]
          Length = 206

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +    P++++      PG+HG  R+S+ S +GLQLR KQ
Sbjct: 1   MARYLGPTCKLSRREGTDLFLKSGVRPLDSKCKADTIPGVHGA-RRSRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R  G T  NL+  LE+RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRLYGVL-EKQFRNYYKEAARLSGATGENLLQLLETRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ + VNG +VN+ SY+ K GDV+ V++K+K    +  A ++A +R +PE++ V+   M
Sbjct: 119 SHKSITVNGETVNVPSYKIKAGDVVAVREKAKNQLRIKSALEVAGQRGMPEWVQVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  IP   +    P  +  NL+VE YS+
Sbjct: 179 SGEFKSIPERGE---LPAEINENLIVELYSK 206


>gi|297717888|gb|ADI50087.1| SSU ribosomal protein S4p [Candidatus Odyssella thessalonicensis
           L13]
          Length = 204

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 127/206 (61%), Positives = 161/206 (78%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR ++K+KIDRR+G NLWGRPKSPVN+RSYGPG HGQ+R  KPS +GLQLRAKQK+K 
Sbjct: 1   MTKRINAKYKIDRRLGVNLWGRPKSPVNSRSYGPGQHGQQRS-KPSDYGLQLRAKQKLKG 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISE++FR +++EA R RGDTS NLI  LE RLD +VYR KFV T FAARQ VNH H
Sbjct: 60  YYGNISERQFRRLYQEAIRRRGDTSENLIELLERRLDAVVYRMKFVATPFAARQLVNHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI S++ K+GD I +  K K+  +V+ ++Q  ERDVPEY++V+H  M   ++
Sbjct: 120 VAVNGKRVNIPSFQLKDGDEISLIGKIKENVNVIASTQSNERDVPEYMTVDHKKMEGKYI 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P    +VPYPV M+PNLV+EFYSR
Sbjct: 180 RGP-KFTEVPYPVHMEPNLVIEFYSR 204


>gi|253991665|ref|YP_003043021.1| 30S ribosomal protein S4 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253783115|emb|CAQ86280.1| 30s ribosomal subunit protein s4 [Photorhabdus asymbiotica]
          Length = 206

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+S LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLSLLEGRLDNVVYRMGFGATRAESRQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ V++KSK+ + +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQREKPTWLEVDAVKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERAD---LSADINEHLIVELYSK 206


>gi|222109617|ref|YP_002551881.1| 30S ribosomal protein s4 [Acidovorax ebreus TPSY]
 gi|254764586|sp|B9MBW1|RS4_DIAST RecName: Full=30S ribosomal protein S4
 gi|221729061|gb|ACM31881.1| ribosomal protein S4 [Acidovorax ebreus TPSY]
          Length = 207

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 86/214 (40%), Positives = 133/214 (62%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S +GLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ A+R +G+T  NL+  LE RLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAAERLKGNTGANLLGLLECRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GDV+ V++KSK+ A ++EA QLA++  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGQSVNIASYLVKAGDVVAVREKSKKQARIVEALQLAQQVGMPVWVEVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D +  TF ++P   +   +   +  +L+VE YSR
Sbjct: 177 DKVEGTFKKVPDRDE---FGADINESLIVELYSR 207


>gi|113460232|ref|YP_718290.1| 30S ribosomal protein S4 [Haemophilus somnus 129PT]
 gi|123327085|sp|Q0I138|RS4_HAES1 RecName: Full=30S ribosomal protein S4
 gi|112822275|gb|ABI24364.1| SSU ribosomal protein S4P [Haemophilus somnus 129PT]
          Length = 206

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDTAPGQHGA-RKPRLSDYGSQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LAE R+ P ++ V    M
Sbjct: 119 SHKAIVVNGRVVNIPSFQVSVNDVVAVREKSKKQARIKASLELAEQRERPTWLEVEAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRVPERSD---LSADINEHLIVELYSK 206


>gi|307266987|ref|ZP_07548503.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390634|ref|ZP_08212189.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200]
 gi|306917972|gb|EFN48230.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993312|gb|EGD51749.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200]
          Length = 206

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +       K PV  R Y PG HGQ +K K + +G+QLR 
Sbjct: 1   MGRYIGPTCRLCRREGMKLYLKGDKCYTDKCPVARRGYAPGQHGQEKK-KLTNYGMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+YYG + E++F   ++EA+R +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKLKRYYGVL-ERQFVRYYEEAERMKGITGENLLQLLERRLDNVVYRLGFAASRPQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V+H H+ VNG+ V+I S+  K GDVI V++KS+ +  +    +++ R+VP+++ +N D 
Sbjct: 119 LVSHGHIEVNGKKVDIPSFLVKPGDVISVREKSRSMELIKNNLEVS-RNVPDWLELNKDA 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V +P   + +  P  +Q +L+VE YS+
Sbjct: 178 FEGRVVSLP-RREHIDLP--IQEHLIVELYSK 206


>gi|228472245|ref|ZP_04057011.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624]
 gi|228276448|gb|EEK15172.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624]
          Length = 201

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    ++Y PG HG  R+++K S + +QL+ KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGEDKS-FAKKNYPPGQHGINRKRAKRSEYAIQLQEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++F++++++A RS+G T   L+   E+RLD +VYR    P+  AARQ V+HR
Sbjct: 60  YTYG-ILERQFQNMYEKARRSKGVTGEVLLQLCEARLDNVVYRMGIAPSRRAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GD++ V+ KS+ L  + E S  +   V E+I+ N + +  TF
Sbjct: 119 HITVNGEVVNIPSYSLKPGDIVGVRHKSQSLTVI-ENSLASNSSVYEWITWNPEKLEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     +  P  ++  L+VE YS+
Sbjct: 178 VALPQR---IQIPENIKEQLIVELYSK 201


>gi|85060232|ref|YP_455934.1| 30S ribosomal protein S4 [Sodalis glossinidius str. 'morsitans']
 gi|123518718|sp|Q2NQP6|RS4_SODGM RecName: Full=30S ribosomal protein S4
 gi|84780752|dbj|BAE75529.1| 30S ribosomal protein S4 [Sodalis glossinidius str. 'morsitans']
          Length = 206

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVTPNDVVSIREKAKKQSRVRASLELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|297537555|ref|YP_003673324.1| 30S ribosomal protein S4 [Methylotenera sp. 301]
 gi|297256902|gb|ADI28747.1| ribosomal protein S4 [Methylotenera sp. 301]
          Length = 209

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 118/213 (55%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R++ PG HGQRR  + S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKAEKCFTDKCAIEKRNFPPGQHGQRRNQRLSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FRS + EADR +G T  NL+  LE RLD + YR     +   ARQ
Sbjct: 61  KQKVRRIYGVL-EAQFRSYYAEADRQKGITGENLLQLLECRLDNVTYRMGLGGSRTEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  +LVNGR VNI SY+ K GDV+ V + SK    +  A + AE R  P +I V+  
Sbjct: 120 IVRHNSILVNGRRVNIPSYQVKAGDVVSVAESSKTQLRIKGALEAAEQRGFPAWIEVDVK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  TF   P   +    P  +  +LVVE YS+
Sbjct: 180 ALKGTFKAKPQRDE---LPPTINESLVVELYSK 209


>gi|170700719|ref|ZP_02891714.1| ribosomal protein S4 [Burkholderia ambifaria IOP40-10]
 gi|171318373|ref|ZP_02907531.1| ribosomal protein S4 [Burkholderia ambifaria MEX-5]
 gi|152060939|sp|Q0BJ21|RS4_BURCM RecName: Full=30S ribosomal protein S4
 gi|170134389|gb|EDT02722.1| ribosomal protein S4 [Burkholderia ambifaria IOP40-10]
 gi|171096451|gb|EDT41350.1| ribosomal protein S4 [Burkholderia ambifaria MEX-5]
          Length = 207

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GD++ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKSITVNGVVANVPSQQVKAGDIVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207


>gi|296332057|ref|ZP_06874521.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675548|ref|YP_003867220.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150828|gb|EFG91713.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413792|gb|ADM38911.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 200

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  L+SRLD +VY+     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I SY+ K G  I V++KS+ L+ + E+ ++    VPEY++ + + +  TF 
Sbjct: 119 ILVDGSRVDIPSYQVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VEFYSR
Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200


>gi|146313361|ref|YP_001178435.1| 30S ribosomal protein S4 [Enterobacter sp. 638]
 gi|172046002|sp|A4WFA4|RS4_ENT38 RecName: Full=30S ribosomal protein S4
 gi|145320237|gb|ABP62384.1| SSU ribosomal protein S4P [Enterobacter sp. 638]
          Length = 206

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRTYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+ K  DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVCIREKAKKQSRVKAALELAEQREKPTWLEVDASKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206


>gi|291619151|ref|YP_003521893.1| RpsD [Pantoea ananatis LMG 20103]
 gi|291154181|gb|ADD78765.1| RpsD [Pantoea ananatis LMG 20103]
          Length = 206

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ VLVNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKSVLVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|170695706|ref|ZP_02886848.1| ribosomal protein S4 [Burkholderia graminis C4D1M]
 gi|170139311|gb|EDT07497.1| ribosomal protein S4 [Burkholderia graminis C4D1M]
          Length = 207

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + K GDV+ V+++ K+ A +LEA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGVVSNIPSMQVKAGDVVAVREQKKKQARILEALSLAEQGGMPSWVAVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF   P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKSKPERSD---IAGDINESLIVELYSR 207


>gi|262273355|ref|ZP_06051169.1| SSU ribosomal protein S4p (S9e) [Grimontia hollisae CIP 101886]
 gi|262222333|gb|EEY73644.1| SSU ribosomal protein S4p (S9e) [Grimontia hollisae CIP 101886]
          Length = 206

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 129/211 (61%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DVI +++K+K  A +  A ++ A+R++P +I V+ + M
Sbjct: 119 SHKAILVNGKVVNVPSFKVTANDVISIREKAKNQARIKAALEIAAQRELPTWIEVDSNKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206


>gi|228474508|ref|ZP_04059241.1| ribosomal protein S4 [Staphylococcus hominis SK119]
 gi|314936181|ref|ZP_07843528.1| ribosomal protein S4 [Staphylococcus hominis subsp. hominis C80]
 gi|228271537|gb|EEK12899.1| ribosomal protein S4 [Staphylococcus hominis SK119]
 gi|313654800|gb|EFS18545.1| ribosomal protein S4 [Staphylococcus hominis subsp. hominis C80]
          Length = 200

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ V H H
Sbjct: 60  LYG-MTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVGHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + D++  TFV
Sbjct: 119 IEVDGKRVDIPSYALKPGQVISVREKSQNLDIIKESVEI-NNFVPEYLDFDADSLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200


>gi|150392132|ref|YP_001322181.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
 gi|171460826|sp|A6TWF4|RS4A_ALKMQ RecName: Full=30S ribosomal protein S4 A
 gi|149951994|gb|ABR50522.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
          Length = 207

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K  +  R++ PG HG  RK   +Y G+QLR 
Sbjct: 1   MARYTDAVCRLCRREGLKLYLKGERCYTDKCAITKRNFAPGQHGTSRKKLSNY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K++YG + E +FR  F  AD+  G+T  NL+  LE+RLD +VYR     +   ARQ
Sbjct: 60  KQKAKRFYGVL-ESQFRKYFDMADKQAGNTGENLLRILETRLDNLVYRLGLASSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  VNG  V+I SY  K GD + V +KS       E  +  +  VP +++V+ + 
Sbjct: 119 LVVHGHFTVNGGKVDIPSYLVKAGDAVAVSEKSTNSPKFKELKENFKGTVPTWLTVDSEK 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      +PS  +D+  P+    NL+VE YS+
Sbjct: 179 LEGKVAAMPSR-EDIDLPIS--ENLIVELYSK 207


>gi|187925591|ref|YP_001897233.1| 30S ribosomal protein S4 [Burkholderia phytofirmans PsJN]
 gi|226697818|sp|B2T726|RS4_BURPP RecName: Full=30S ribosomal protein S4
 gi|187716785|gb|ACD18009.1| ribosomal protein S4 [Burkholderia phytofirmans PsJN]
          Length = 207

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ ++VNG   NI S + K GDV+ V++  K+ A +LEA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAIVVNGVVSNIPSMQVKAGDVVAVRETKKKQARILEALSLAEQGGMPSWVAVDS 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF + P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207


>gi|318607721|emb|CBY29219.1| SSU ribosomal protein S4p (S9e) [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 206

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAIKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|270294726|ref|ZP_06200927.1| 30S ribosomal protein S4 [Bacteroides sp. D20]
 gi|270273973|gb|EFA19834.1| 30S ribosomal protein S4 [Bacteroides sp. D20]
          Length = 201

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 120/206 (58%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR++F++A+ ++G T   L+  LE RLD IV+R    PT  AARQ V+H+H
Sbjct: 60  TYG-ILEKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V+++SK L  +  +          ++  + ++ V   +
Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++ +L+VE YS+
Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201


>gi|22127884|ref|NP_671307.1| 30S ribosomal protein S4 [Yersinia pestis KIM 10]
 gi|45440091|ref|NP_991630.1| 30S ribosomal protein S4 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597964|ref|YP_072155.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis IP 32953]
 gi|108809231|ref|YP_653147.1| 30S ribosomal protein S4 [Yersinia pestis Antiqua]
 gi|108813996|ref|YP_649763.1| 30S ribosomal protein S4 [Yersinia pestis Nepal516]
 gi|123444074|ref|YP_001008044.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|145597474|ref|YP_001161549.1| 30S ribosomal protein S4 [Yersinia pestis Pestoides F]
 gi|150260719|ref|ZP_01917447.1| 30S ribosomal protein S4 [Yersinia pestis CA88-4125]
 gi|153947510|ref|YP_001402839.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis IP 31758]
 gi|162420100|ref|YP_001605196.1| 30S ribosomal protein S4 [Yersinia pestis Angola]
 gi|165927897|ref|ZP_02223729.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|166010539|ref|ZP_02231437.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213178|ref|ZP_02239213.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398630|ref|ZP_02304154.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419283|ref|ZP_02311036.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425684|ref|ZP_02317437.1| ribosomal protein S4 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170022568|ref|YP_001719073.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis YPIII]
 gi|186897160|ref|YP_001874272.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis PB1/+]
 gi|218927439|ref|YP_002345314.1| 30S ribosomal protein S4 [Yersinia pestis CO92]
 gi|229836285|ref|ZP_04456452.1| 30S ribosomal subunit protein S4 [Yersinia pestis Pestoides A]
 gi|229840091|ref|ZP_04460250.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842173|ref|ZP_04462328.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229904527|ref|ZP_04519638.1| 30S ribosomal subunit protein S4 [Yersinia pestis Nepal516]
 gi|238752667|ref|ZP_04614138.1| 30S ribosomal protein S4 [Yersinia rohdei ATCC 43380]
 gi|238754196|ref|ZP_04615554.1| 30S ribosomal protein S4 [Yersinia ruckeri ATCC 29473]
 gi|238758784|ref|ZP_04619958.1| 30S ribosomal protein S4 [Yersinia aldovae ATCC 35236]
 gi|238783187|ref|ZP_04627213.1| 30S ribosomal protein S4 [Yersinia bercovieri ATCC 43970]
 gi|238797220|ref|ZP_04640721.1| 30S ribosomal protein S4 [Yersinia mollaretii ATCC 43969]
 gi|270488255|ref|ZP_06205329.1| ribosomal protein S4 [Yersinia pestis KIM D27]
 gi|294502308|ref|YP_003566370.1| 30S ribosomal protein S4 [Yersinia pestis Z176003]
 gi|332163237|ref|YP_004299814.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|26399435|sp|Q8ZJ88|RS4_YERPE RecName: Full=30S ribosomal protein S4
 gi|61215490|sp|Q664U5|RS4_YERPS RecName: Full=30S ribosomal protein S4
 gi|123245525|sp|Q1C2X0|RS4_YERPA RecName: Full=30S ribosomal protein S4
 gi|123372820|sp|Q1CCW7|RS4_YERPN RecName: Full=30S ribosomal protein S4
 gi|152112273|sp|A1JS02|RS4_YERE8 RecName: Full=30S ribosomal protein S4
 gi|171769160|sp|A7FNL1|RS4_YERP3 RecName: Full=30S ribosomal protein S4
 gi|172044482|sp|A4TH14|RS4_YERPP RecName: Full=30S ribosomal protein S4
 gi|226703313|sp|B2K513|RS4_YERPB RecName: Full=30S ribosomal protein S4
 gi|226703314|sp|A9R917|RS4_YERPG RecName: Full=30S ribosomal protein S4
 gi|226703315|sp|B1JJG9|RS4_YERPY RecName: Full=30S ribosomal protein S4
 gi|21961020|gb|AAM87558.1|AE014003_16 30S ribosomal subunit protein S4 [Yersinia pestis KIM 10]
 gi|45434946|gb|AAS60507.1| 30S ribosomal protein S4 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591246|emb|CAH22912.1| 30S ribosomal protein S4 [Yersinia pseudotuberculosis IP 32953]
 gi|108777644|gb|ABG20163.1| SSU ribosomal protein S4P [Yersinia pestis Nepal516]
 gi|108781144|gb|ABG15202.1| SSU ribosomal protein S4P [Yersinia pestis Antiqua]
 gi|115346050|emb|CAL18916.1| 30S ribosomal protein S4 [Yersinia pestis CO92]
 gi|122091035|emb|CAL13918.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|145209170|gb|ABP38577.1| SSU ribosomal protein S4P [Yersinia pestis Pestoides F]
 gi|149290127|gb|EDM40204.1| 30S ribosomal protein S4 [Yersinia pestis CA88-4125]
 gi|152959005|gb|ABS46466.1| ribosomal protein S4 [Yersinia pseudotuberculosis IP 31758]
 gi|162352915|gb|ABX86863.1| ribosomal protein S4 [Yersinia pestis Angola]
 gi|165920173|gb|EDR37474.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990629|gb|EDR42930.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205476|gb|EDR49956.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166963277|gb|EDR59298.1| ribosomal protein S4 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051134|gb|EDR62542.1| ribosomal protein S4 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055374|gb|EDR65168.1| ribosomal protein S4 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749102|gb|ACA66620.1| ribosomal protein S4 [Yersinia pseudotuberculosis YPIII]
 gi|186700186|gb|ACC90815.1| ribosomal protein S4 [Yersinia pseudotuberculosis PB1/+]
 gi|229678645|gb|EEO74750.1| 30S ribosomal subunit protein S4 [Yersinia pestis Nepal516]
 gi|229690483|gb|EEO82537.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696457|gb|EEO86504.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706353|gb|EEO92360.1| 30S ribosomal subunit protein S4 [Yersinia pestis Pestoides A]
 gi|238703081|gb|EEP95624.1| 30S ribosomal protein S4 [Yersinia aldovae ATCC 35236]
 gi|238707692|gb|EEQ00052.1| 30S ribosomal protein S4 [Yersinia ruckeri ATCC 29473]
 gi|238709094|gb|EEQ01341.1| 30S ribosomal protein S4 [Yersinia rohdei ATCC 43380]
 gi|238715983|gb|EEQ07969.1| 30S ribosomal protein S4 [Yersinia bercovieri ATCC 43970]
 gi|238718857|gb|EEQ10672.1| 30S ribosomal protein S4 [Yersinia mollaretii ATCC 43969]
 gi|262360388|gb|ACY57109.1| 30S ribosomal protein S4 [Yersinia pestis D106004]
 gi|262364338|gb|ACY60895.1| 30S ribosomal protein S4 [Yersinia pestis D182038]
 gi|270336759|gb|EFA47536.1| ribosomal protein S4 [Yersinia pestis KIM D27]
 gi|294352767|gb|ADE63108.1| 30S ribosomal protein S4 [Yersinia pestis Z176003]
 gi|320013366|gb|ADV96937.1| 30S ribosomal subunit protein S4 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
 gi|325667467|gb|ADZ44111.1| 30S ribosomal protein S4 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861830|emb|CBX72001.1| 30S ribosomal protein S4 [Yersinia enterocolitica W22703]
          Length = 206

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|225873051|ref|YP_002754510.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196]
 gi|254764560|sp|C1F615|RS4_ACIC5 RecName: Full=30S ribosomal protein S4
 gi|225792033|gb|ACO32123.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196]
          Length = 209

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  +  R++ PG HG+ RK+K   +GLQLR 
Sbjct: 1   MARYTGPVCRLCRREGMKLFLKGTKCFTDKCAIEKRNFAPGQHGRDRKAKIVGYGLQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ Y  + E +FR  +++A R+ G T   LI  LE RLD I +R  F  +   ARQ
Sbjct: 61  KQKAKRIYFTL-EGQFREYYEKASRAPGVTGELLIQQLECRLDNIAFRLGFATSRRQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H HV VNGR VNI S++ K GD I+++  S +L  V      A  +  P ++ V+H 
Sbjct: 120 IVRHGHVEVNGRKVNIPSFQVKVGDEIKIRPNSSKLVVVEMGRDFASGQPAPAWLQVDHA 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+    V +P   +DV  PV     L+VE YS+
Sbjct: 180 NLSGKVVSLPKR-EDVNLPV--NEQLIVELYSK 209


>gi|255011672|ref|ZP_05283798.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12]
 gi|313149508|ref|ZP_07811701.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12]
 gi|313138275|gb|EFR55635.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12]
          Length = 201

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQMLEGRLDNLVFRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G +I V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGQVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|153805982|ref|ZP_01958650.1| hypothetical protein BACCAC_00227 [Bacteroides caccae ATCC 43185]
 gi|149130659|gb|EDM21865.1| hypothetical protein BACCAC_00227 [Bacteroides caccae ATCC 43185]
          Length = 201

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G +I V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGEVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKML 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|281422226|ref|ZP_06253225.1| ribosomal protein S4 [Prevotella copri DSM 18205]
 gi|281403731|gb|EFB34411.1| ribosomal protein S4 [Prevotella copri DSM 18205]
          Length = 201

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F +A ++ G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFDKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G+ VNI S+  K G V+ V++KSK L  +  A          +I  + ++    F+
Sbjct: 119 IVVDGKVVNIPSFAVKPGMVVGVREKSKSLEVIEAALAGFNHSKYPWIEWDDNSKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|307565139|ref|ZP_07627647.1| 30S ribosomal protein S4 [Prevotella amnii CRIS 21A-A]
 gi|307346170|gb|EFN91499.1| 30S ribosomal protein S4 [Prevotella amnii CRIS 21A-A]
          Length = 201

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  ++ R++ PG HG  R+ K S +G QL  KQK K 
Sbjct: 1   MARYIGPKSRIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A +S G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNLFEKAAKSEGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG  VNI SY  K GDV+ V++K+K L  +  A          ++  + +     F+
Sbjct: 119 ITVNGNVVNIASYCVKTGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENAKAGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201


>gi|160888373|ref|ZP_02069376.1| hypothetical protein BACUNI_00786 [Bacteroides uniformis ATCC 8492]
 gi|317477726|ref|ZP_07936919.1| ribosomal protein S4 [Bacteroides sp. 4_1_36]
 gi|319900951|ref|YP_004160679.1| SSU ribosomal protein S4P [Bacteroides helcogenes P 36-108]
 gi|156862050|gb|EDO55481.1| hypothetical protein BACUNI_00786 [Bacteroides uniformis ATCC 8492]
 gi|316906071|gb|EFV27832.1| ribosomal protein S4 [Bacteroides sp. 4_1_36]
 gi|319415982|gb|ADV43093.1| SSU ribosomal protein S4P [Bacteroides helcogenes P 36-108]
          Length = 201

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A+ ++G T   L+  LE RLD IV+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V+++SK L  +  +          ++  + ++ V   +
Sbjct: 119 ITVDGEVVNIPSYAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++ +L+VE YS+
Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201


>gi|197117349|ref|YP_002137776.1| 30S ribosomal protein S4 [Geobacter bemidjiensis Bem]
 gi|226699068|sp|B5EFS6|RS4_GEOBB RecName: Full=30S ribosomal protein S4
 gi|197086709|gb|ACH37980.1| ribosomal protein S4 [Geobacter bemidjiensis Bem]
          Length = 208

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  +  RSY PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYTGPSCRLCRREGSELFLKGERCYTDKCAIKRRSYPPGQHGQGR-IKVSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR  F+ ADR +G T  NL+  LE RLD + YR  F  +   ARQ
Sbjct: 60  KQKVRRIYG-ILENQFRGYFETADRMKGVTGENLLFILERRLDNVAYRLGFATSRDEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  +NG+ VNI S + K GDV+++++KS+++A++ E+ + +  R +P+++ +  D
Sbjct: 119 LVRHGHFTLNGKKVNIPSLQVKAGDVLQLREKSRKVAAISESLEGVVRRGIPQWLELEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P   +D+  P  +Q  L+VE YS+
Sbjct: 179 AFKGTVKAMPVR-EDITMP--IQEQLIVELYSK 208


>gi|255690029|ref|ZP_05413704.1| ribosomal protein S4 [Bacteroides finegoldii DSM 17565]
 gi|260624636|gb|EEX47507.1| ribosomal protein S4 [Bacteroides finegoldii DSM 17565]
          Length = 201

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G +I V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGEVVNIPSYAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKML 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|50122927|ref|YP_052094.1| 30S ribosomal protein S4 [Pectobacterium atrosepticum SCRI1043]
 gi|227115248|ref|ZP_03828904.1| 30S ribosomal protein S4 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227328925|ref|ZP_03832949.1| 30S ribosomal protein S4 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|253690159|ref|YP_003019349.1| ribosomal protein S4 [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|61215522|sp|Q6CZZ4|RS4_ERWCT RecName: Full=30S ribosomal protein S4
 gi|259495287|sp|C6DFS4|RS4_PECCP RecName: Full=30S ribosomal protein S4
 gi|49613453|emb|CAG76904.1| 30S ribosomal subunit protein S4 [Pectobacterium atrosepticum
           SCRI1043]
 gi|251756737|gb|ACT14813.1| ribosomal protein S4 [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 206

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAEARQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR V+I SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVSIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|313673441|ref|YP_004051552.1| SSU ribosomal protein s4p [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940197|gb|ADR19389.1| SSU ribosomal protein S4P [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 208

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +       K  +  + Y PG HGQ +K K S +G+QLR 
Sbjct: 1   MARYTGPSCKLCRREGMKLYLKGERCYKDKCGIEKKGYPPGQHGQLKK-KLSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG I E +FR  F+ A   +G T  NL+  LE RLD  VYRA F  +   ARQ
Sbjct: 60  KQKVKRIYG-ILESQFRLYFERATNMKGITGENLLQLLERRLDNAVYRAGFASSRTQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNG+ VNI SY  K GDVIE+++KS+    ++E+ + +E R   E++S++  
Sbjct: 119 LVRHNHFTVNGKKVNIPSYLLKVGDVIELREKSRDNKLIVESLETSEGRGTAEWLSIDKA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              A   R+P           +Q +L+VE YS+
Sbjct: 179 AFKAVVNRLPERSD---IGYDIQEHLIVELYSK 208


>gi|149184798|ref|ZP_01863116.1| 30S ribosomal protein S4 [Erythrobacter sp. SD-21]
 gi|148832118|gb|EDL50551.1| 30S ribosomal protein S4 [Erythrobacter sp. SD-21]
          Length = 204

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 125/206 (60%), Positives = 161/206 (78%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR+S+K+K+DRR+GEN+WGRP SPVN RSYGPG HGQRRKSK S FGLQLRAKQK+K 
Sbjct: 1   MSKRKSAKYKLDRRMGENIWGRPNSPVNKRSYGPGQHGQRRKSKMSDFGLQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+  +KEA   +GDT  NLI  LE RLD +VYRAKF PTIFAARQ V+H H
Sbjct: 61  YYGDVTEKQFKRTYKEASAMKGDTGQNLIGLLEQRLDMVVYRAKFAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG   NI S R + GDV+ +  K+K++A V+EA  L ER++P+Y++ + ++   T+ 
Sbjct: 121 IFLNGVKTNIASARVRVGDVVSLGSKAKEMALVIEAQSLPEREIPDYVAPDGND-KVTYN 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P  L +VPYPV M+PNLVVEFYSR
Sbjct: 180 RVP-KLDEVPYPVTMEPNLVVEFYSR 204


>gi|329298510|ref|ZP_08255846.1| 30S ribosomal protein S4 [Plautia stali symbiont]
          Length = 206

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKSVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|313204943|ref|YP_004043600.1| SSU ribosomal protein s4p [Paludibacter propionicigenes WB4]
 gi|312444259|gb|ADQ80615.1| SSU ribosomal protein S4P [Paludibacter propionicigenes WB4]
          Length = 201

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  +  ++Y PG HGQ R+ K S +G+QLR KQK K 
Sbjct: 1   MARYIGPKSRIARKFGEAIFGPDK-VLAKKNYPPGQHGQGRRKKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+++++A R++G T   L+  LESRLD IVYR  F PT   ARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNMYEKAQRTKGVTGEVLLQLLESRLDNIVYRLGFAPTRSGARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  + G VI V++K K +  +  +          +I  N  ++   ++
Sbjct: 119 ITVDGKVVNIASYHVRAGQVIAVREKDKSMEVIAASLNGFNHSKYPWIEWNAASLSGVYL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++  L+VE YS+
Sbjct: 179 HIPER---EDIPENIKEQLIVELYSK 201


>gi|297583620|ref|YP_003699400.1| 30S ribosomal protein S4 [Bacillus selenitireducens MLS10]
 gi|297142077|gb|ADH98834.1| ribosomal protein S4 [Bacillus selenitireducens MLS10]
          Length = 200

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  ++ R YGPG HG   + K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LSKRPYGPGQHGPNSRRKVSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F ++F+ A + +G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-MNERQFNTLFEAAGKLQGIHGENFMILLESRLDNLVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V V+G+ V+I SYR   G  I +++KS+ L  V  A ++ +  +P Y+  + + +   F 
Sbjct: 119 VTVDGKRVDIPSYRVAPGQSISLREKSRNLDVVKSAIEMNDF-LPSYLEFDAEKLEGKFA 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RYPERSE---LPAEINEQLIVEWYSR 200


>gi|46199603|ref|YP_005270.1| 30S ribosomal protein S4 [Thermus thermophilus HB27]
 gi|55981634|ref|YP_144931.1| 30S ribosomal protein S4 [Thermus thermophilus HB8]
 gi|7404455|sp|P80373|RS4_THET8 RecName: Full=30S ribosomal protein S4
 gi|50401228|sp|P62664|RS4_THET2 RecName: Full=30S ribosomal protein S4
 gi|10120567|pdb|1FKA|D Chain D, Structure Of Functionally Activated Small Ribosomal
           Subunit At 3.3 A Resolution
 gi|13399795|pdb|1HNW|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Tetracycline
 gi|13399817|pdb|1HNX|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Pactamycin
 gi|13399839|pdb|1HNZ|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Hygromycin B
 gi|14278059|pdb|1IBK|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotic Paromomycin
 gi|14278080|pdb|1IBL|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site And With The Antibiotic Paromomycin
 gi|14278104|pdb|1IBM|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site
 gi|58177403|pdb|1XMO|D Chain D, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
           With Aag-Mrna In The Decoding Center
 gi|58177426|pdb|1XMQ|D Chain D, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
           Decoding Center
 gi|58177467|pdb|1XNQ|D Chain D, Structure Of An Inosine-Adenine Wobble Base Pair Complex
           In The Context Of The Decoding Center
 gi|58177490|pdb|1XNR|D Chain D, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
           In The Context Of The Decoding Center
 gi|66361057|pdb|1YL4|G Chain G, Crystal Structure Of 70s Ribosome With Thrs Operator And
           Trnas. 30s Subunit. The Coordinates For The 50s Subunit
           Are In The Pdb Entry 1yl3
 gi|88192239|pdb|2B64|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|88192302|pdb|2B9M|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400.
 gi|88192358|pdb|2B9O|D Chain D, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
           Structure Of The Whole Ribosomal Complex With A Stop
           Codon In The A-Site. This File Contains The 30s Subunit,
           Trnas And Mrna From A Crystal Structure Of The Whole
           Ribosomal Complex With A Stop Codon In The A-Site And Is
           Described In Remark 400.
 gi|116667657|pdb|2HHH|D Chain D, Crystal Structure Of Kasugamycin Bound To The 30s
           Ribosomal Subunit
 gi|116668200|pdb|2J00|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule I.
 gi|116668261|pdb|2J02|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule Ii.
 gi|119389715|pdb|2HGI|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
           This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
 gi|119389772|pdb|2HGP|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           With Translocated And Rotated Shine-Dalgarno Duplex.
           This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
 gi|119389828|pdb|2HGR|G Chain G, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
           P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
           Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
           Found In Pdb Entry 2hgu.
 gi|149242711|pdb|2OW8|EE Chain e, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
           Functional Interactions And Rearrangements. This File,
           2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File
           1vsa.
 gi|149243621|pdb|2UU9|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gug-Codon In The
           A-Site And Paromomycin.
 gi|149243648|pdb|2UUA|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guc-Codon In The
           A-Site And Paromomycin.
 gi|149243675|pdb|2UUB|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guu-Codon In The
           A-Site And Paromomycin.
 gi|149243702|pdb|2UUC|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gua-Codon In The
           A-Site And Paromomycin.
 gi|149243841|pdb|2UXC|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Ucgu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836411|pdb|2UXB|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Gggu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836488|pdb|2V46|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 1 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 1.
 gi|157836544|pdb|2V48|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 3 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 2.
 gi|158430903|pdb|2UXD|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Cggg In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|160285942|pdb|2QNH|EE Chain e, Interactions And Dynamics Of The Shine-Dalgarno Helix In
           The 70s Ribosome. This File, 2qnh, Contains The 30s
           Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
           Ribosome Subunit Is In The File 1vsp.
 gi|186972852|pdb|2VQE|D Chain D, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|186972875|pdb|2VQF|D Chain D, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|187609258|pdb|2ZKQ|DD Chain d, Structure Of A Mammalian Ribosomal 40s Subunit Within An
           80s Complex Obtained By Docking Homology Models Of The
           Rna And Proteins Into An 8.7 A Cryo-Em Map
 gi|209156499|pdb|3D5A|D Chain D, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156555|pdb|3D5C|D Chain D, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938822|pdb|2JL5|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938880|pdb|2JL7|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|218766776|pdb|3F1E|D Chain D, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766832|pdb|3F1G|D Chain D, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|226887377|pdb|2WDG|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule I.
 gi|226887402|pdb|2WDH|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule Ii.
 gi|226887491|pdb|2WDK|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule I.
 gi|226887548|pdb|2WDM|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule Ii.
 gi|237823532|pdb|2WH1|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823591|pdb|2WH3|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit.
 gi|260099989|pdb|3HUW|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule I.
 gi|260100045|pdb|3HUY|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule Ii.
 gi|261824487|pdb|2WRI|D Chain D, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 1 Of 4).
 gi|261824549|pdb|2WRK|D Chain D, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 3 Of 4).
 gi|261824611|pdb|2WRN|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 1 Of 4).
 gi|261824670|pdb|2WRQ|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 3 Of 4).
 gi|281307170|pdb|3KIQ|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 1 Of 4)
 gi|281307228|pdb|3KIS|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 3 Of 4)
 gi|281307286|pdb|3KIU|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 1 Of 4)
 gi|281307344|pdb|3KIX|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 3 Of 4)
 gi|288965607|pdb|3KNH|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule I
 gi|289526685|pdb|3KNJ|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule Ii'
 gi|289526710|pdb|3KNL|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule I
 gi|289526735|pdb|3KNN|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule Ii
 gi|294979507|pdb|3I8G|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
           The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
           (50s).
 gi|294979532|pdb|3I8H|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
           The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
           (30s).
 gi|294979591|pdb|3I9B|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
           The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
           A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
           And 3i9e (50s)
 gi|294979645|pdb|3I9D|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
           The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
           B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
           And 3i9c (50s)
 gi|295982078|pdb|2X9R|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982137|pdb|2X9T|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|307567965|pdb|2XFZ|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 1 Of 4)
 gi|307568023|pdb|2XG1|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 3 Of 4)
 gi|307776615|pdb|3OTO|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
           Mutant Of Thermus Thermophilus (Hb8)
 gi|309320238|pdb|3OGE|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320259|pdb|3OGY|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320340|pdb|3OHC|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320361|pdb|3OHD|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320442|pdb|3OHY|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320493|pdb|3OI0|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320544|pdb|3OI2|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320595|pdb|3OI4|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|312207676|pdb|2XQD|D Chain D, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
           Ribosome With A Gtp Analog
 gi|313754002|pdb|2XSY|D Chain D, Trna Tranlocation On The 70s Ribosome: The Pre-
           Translocational Translocation Intermediate Ti(Pre)
 gi|313754117|pdb|2XUY|D Chain D, Trna Tranlocation On The 70s Ribosome: The Post-
           Translocational Translocation Intermediate Ti(Post)
 gi|325533405|pdb|2Y0U|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533464|pdb|2Y0W|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533523|pdb|2Y0Y|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533582|pdb|2Y10|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|325533641|pdb|2Y12|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533700|pdb|2Y14|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533759|pdb|2Y16|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533818|pdb|2Y18|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|4519422|dbj|BAA75548.1| ribosomal protein S4 [Thermus thermophilus]
 gi|46197229|gb|AAS81643.1| SSU ribosomal protein S4P [Thermus thermophilus HB27]
 gi|55773047|dbj|BAD71488.1| 30S ribosomal protein S4 [Thermus thermophilus HB8]
          Length = 209

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +      PK  +  R Y PG HGQ+R  +PS + ++LR 
Sbjct: 1   MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG ISE++FR++F+EA + +G T    +  LESRLD +VYR  F  +   ARQ
Sbjct: 61  KQKLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+ VNGR V++ SYR + GD I V +KS+ L  + +  + +  R V  ++S++ +
Sbjct: 120 LVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F+R+P   +D+  PV     LV+EFYSR
Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVIEFYSR 209


>gi|241763534|ref|ZP_04761586.1| ribosomal protein S4 [Acidovorax delafieldii 2AN]
 gi|241367265|gb|EER61605.1| ribosomal protein S4 [Acidovorax delafieldii 2AN]
          Length = 207

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 130/214 (60%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        KS  +++   PG HG+   ++ S +GLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIADKSKFDSK---PGQHGRTSGARTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG I EK+FR  F+ AD  +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYG-ILEKQFRRYFEAADGRKGNTGANLLFLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GDV+ V++KSK+ + ++EA QL A+  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGQSVNIPSYLVKVGDVVAVREKSKKQSRIVEALQLAAQVGMPAWVEVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D     F ++P   +   +   +  +L+VE YSR
Sbjct: 177 DKAEGIFKKVPDRDE---FGADINESLIVELYSR 207


>gi|311031300|ref|ZP_07709390.1| 30S ribosomal protein S4 [Bacillus sp. m3-13]
          Length = 200

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGVSLSGTGKE-LEKRPYAPGQHGPNQRRKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FRSIF  A + +G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRSIFDAAGKMQGKHGENFMILLESRLDNLVYRLGLARTRRGARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I S+R K G VI V++KS+ L+SV E+ ++    VPEY++   D +  TF 
Sbjct: 119 ITVDGSRVDIPSFRVKPGQVIGVREKSRNLSSVKESVEV-NNFVPEYLTFTADALEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   L+VEFYSR
Sbjct: 178 RLPERSE---LAAEINEALIVEFYSR 200


>gi|295677907|ref|YP_003606431.1| ribosomal protein S4 [Burkholderia sp. CCGE1002]
 gi|295437750|gb|ADG16920.1| ribosomal protein S4 [Burkholderia sp. CCGE1002]
          Length = 207

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V H+ + VNG   NI S + K GDV+ V+++ ++ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVGHKAITVNGVVTNIPSMQVKAGDVVAVREQKRKQARIIEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF + P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207


>gi|58583182|ref|YP_202198.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625021|ref|YP_452393.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|166710856|ref|ZP_02242063.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188575513|ref|YP_001912442.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|75508108|sp|Q5GWV8|RS4_XANOR RecName: Full=30S ribosomal protein S4
 gi|123521160|sp|Q2P008|RS4_XANOM RecName: Full=30S ribosomal protein S4
 gi|226732182|sp|B2SQT3|RS4_XANOP RecName: Full=30S ribosomal protein S4
 gi|58427776|gb|AAW76813.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368961|dbj|BAE70119.1| 30S ribosomal protein S4 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519965|gb|ACD57910.1| ribosomal protein S4 [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 208

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  +   PG HG  RK K S +  QLR
Sbjct: 1   MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGASRKGKLSDYATQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K+A   +G+T  NL+  LE+RLD + YR  F  T  AAR
Sbjct: 58  EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVCYRMGFAVTRPAAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171
           Q V+HR VLVNG+SVN+ SY+ K GD I + +K+++   V EA  +AE+    P ++ V+
Sbjct: 117 QLVSHRCVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEALTVAEQHDMTPSWVEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  F  +P        P  +   L+VE YS+
Sbjct: 177 SKKFSGVFKAVPDRAD---LPSDINEALIVELYSK 208


>gi|16762867|ref|NP_458484.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144354|ref|NP_807696.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213027591|ref|ZP_03342038.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
 gi|213052884|ref|ZP_03345762.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425775|ref|ZP_03358525.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213580697|ref|ZP_03362523.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213612395|ref|ZP_03370221.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647330|ref|ZP_03377383.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|289824201|ref|ZP_06543796.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25009212|sp|Q8Z1X4|RS4_SALTI RecName: Full=30S ribosomal protein S4
 gi|25294504|pir||AI1008 30S ribosomal chain protein S4 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16505174|emb|CAD09170.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139992|gb|AAO71556.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 206

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIGQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+ R P           +  +L+VE YS+
Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206


>gi|53720796|ref|YP_109782.1| 30S ribosomal protein S4 [Burkholderia pseudomallei K96243]
 gi|53723829|ref|YP_104141.1| 30S ribosomal protein S4 [Burkholderia mallei ATCC 23344]
 gi|67640848|ref|ZP_00439641.1| 30S ribosomal protein S4 [Burkholderia mallei GB8 horse 4]
 gi|76811379|ref|YP_335115.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1710b]
 gi|121601043|ref|YP_994431.1| 30S ribosomal protein S4 [Burkholderia mallei SAVP1]
 gi|124384949|ref|YP_001027920.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10229]
 gi|126439277|ref|YP_001060725.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 668]
 gi|126448998|ref|YP_001083015.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10247]
 gi|134283223|ref|ZP_01769924.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 305]
 gi|167001674|ref|ZP_02267466.1| 30S ribosomal protein S4 [Burkholderia mallei PRL-20]
 gi|167721552|ref|ZP_02404788.1| 30S ribosomal protein S4 [Burkholderia pseudomallei DM98]
 gi|167740526|ref|ZP_02413300.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 14]
 gi|167817731|ref|ZP_02449411.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 91]
 gi|167826128|ref|ZP_02457599.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 9]
 gi|167896212|ref|ZP_02483614.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 7894]
 gi|167904594|ref|ZP_02491799.1| 30S ribosomal protein S4 [Burkholderia pseudomallei NCTC 13177]
 gi|167912859|ref|ZP_02499950.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 112]
 gi|167920818|ref|ZP_02507909.1| 30S ribosomal protein S4 [Burkholderia pseudomallei BCC215]
 gi|226198240|ref|ZP_03793811.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pakistan 9]
 gi|237814120|ref|YP_002898571.1| ribosomal protein S4 [Burkholderia pseudomallei MSHR346]
 gi|254175265|ref|ZP_04881926.1| 30S ribosomal protein S4 [Burkholderia mallei ATCC 10399]
 gi|254180364|ref|ZP_04886962.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1655]
 gi|254190327|ref|ZP_04896835.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pasteur 52237]
 gi|254198547|ref|ZP_04904968.1| 30S ribosomal protein S4 [Burkholderia pseudomallei S13]
 gi|254201214|ref|ZP_04907578.1| 30S ribosomal protein S4 [Burkholderia mallei FMH]
 gi|254206555|ref|ZP_04912906.1| 30S ribosomal protein S4 [Burkholderia mallei JHU]
 gi|254260076|ref|ZP_04951130.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1710a]
 gi|254300601|ref|ZP_04968046.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 406e]
 gi|61215450|sp|Q62GN0|RS4_BURMA RecName: Full=30S ribosomal protein S4
 gi|61215463|sp|Q63Q36|RS4_BURPS RecName: Full=30S ribosomal protein S4
 gi|90101678|sp|Q3JMT8|RS4_BURP1 RecName: Full=30S ribosomal protein S4
 gi|171769469|sp|A1V878|RS4_BURMS RecName: Full=30S ribosomal protein S4
 gi|171769829|sp|A2S7K1|RS4_BURM9 RecName: Full=30S ribosomal protein S4
 gi|171855085|sp|A3MRX9|RS4_BURM7 RecName: Full=30S ribosomal protein S4
 gi|171855116|sp|A3NEF4|RS4_BURP6 RecName: Full=30S ribosomal protein S4
 gi|52211210|emb|CAH37199.1| 30S ribosomal protein S4 [Burkholderia pseudomallei K96243]
 gi|52427252|gb|AAU47845.1| ribosomal protein S4 [Burkholderia mallei ATCC 23344]
 gi|76580832|gb|ABA50307.1| ribosomal protein S4 [Burkholderia pseudomallei 1710b]
 gi|121229853|gb|ABM52371.1| 30S ribosomal protein S4 [Burkholderia mallei SAVP1]
 gi|124292969|gb|ABN02238.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10229]
 gi|126218770|gb|ABN82276.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 668]
 gi|126241868|gb|ABO04961.1| 30S ribosomal protein S4 [Burkholderia mallei NCTC 10247]
 gi|134245418|gb|EBA45511.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 305]
 gi|147747108|gb|EDK54184.1| 30S ribosomal protein S4 [Burkholderia mallei FMH]
 gi|147752097|gb|EDK59163.1| 30S ribosomal protein S4 [Burkholderia mallei JHU]
 gi|157810528|gb|EDO87698.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 406e]
 gi|157938003|gb|EDO93673.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pasteur 52237]
 gi|160696310|gb|EDP86280.1| 30S ribosomal protein S4 [Burkholderia mallei ATCC 10399]
 gi|169655287|gb|EDS87980.1| 30S ribosomal protein S4 [Burkholderia pseudomallei S13]
 gi|184210903|gb|EDU07946.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1655]
 gi|225929760|gb|EEH25776.1| 30S ribosomal protein S4 [Burkholderia pseudomallei Pakistan 9]
 gi|237504346|gb|ACQ96664.1| ribosomal protein S4 [Burkholderia pseudomallei MSHR346]
 gi|238521643|gb|EEP85093.1| 30S ribosomal protein S4 [Burkholderia mallei GB8 horse 4]
 gi|243062571|gb|EES44757.1| 30S ribosomal protein S4 [Burkholderia mallei PRL-20]
 gi|254218765|gb|EET08149.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1710a]
          Length = 207

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + K GDV+ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207


>gi|319787902|ref|YP_004147377.1| ribosomal protein S4 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466414|gb|ADV28146.1| ribosomal protein S4 [Pseudoxanthomonas suwonensis 11-1]
          Length = 208

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  +   PG HG  RK K S +  QLR
Sbjct: 1   MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGAARKGKLSDYATQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K+A   +G+T  NL+  LE+RLD +VYR  F  T  +AR
Sbjct: 58  EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPSAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171
           Q V+HR VLVNG+ VN+ SY+ K GD I + +K+++   V EA  +AE+    P +I V+
Sbjct: 117 QLVSHRGVLVNGKPVNLPSYQVKAGDSIALSEKAQKQLRVQEALTVAEQHDMTPSWIEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  F  +P        P  +   L+VE YS+
Sbjct: 177 AKKFAGVFKAVPDRAD---LPADINEALIVELYSK 208


>gi|311277749|ref|YP_003939980.1| ribosomal protein S4 [Enterobacter cloacae SCF1]
 gi|308746944|gb|ADO46696.1| ribosomal protein S4 [Enterobacter cloacae SCF1]
          Length = 206

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+ K  DV+ V++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206


>gi|304399266|ref|ZP_07381132.1| ribosomal protein S4 [Pantoea sp. aB]
 gi|308188332|ref|YP_003932463.1| 30S ribosomal protein S4 [Pantoea vagans C9-1]
 gi|304353192|gb|EFM17573.1| ribosomal protein S4 [Pantoea sp. aB]
 gi|308058842|gb|ADO11014.1| 30S ribosomal protein S4 [Pantoea vagans C9-1]
          Length = 206

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGGQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ VLVNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKSVLVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|254456438|ref|ZP_05069867.1| ribosomal protein S4 [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083440|gb|EDZ60866.1| ribosomal protein S4 [Candidatus Pelagibacter sp. HTCC7211]
          Length = 205

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 122/206 (59%), Positives = 158/206 (76%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR +SKHK+DRR+  NLWGRPKSP NTR+YGPG HGQ R+ KPS +G+QL+AKQK+K 
Sbjct: 1   MTKRLNSKHKVDRRLKVNLWGRPKSPFNTRAYGPGQHGQSRQGKPSDYGIQLQAKQKLKA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+I+E++FR+I+K+A   +GDT  NLI  LE RLD ++YRAKF  TIF+ARQ +NH H
Sbjct: 61  YYGNINERQFRNIYKKAVMLKGDTGENLIGLLERRLDAVIYRAKFATTIFSARQLINHNH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNIGSY  KE D IE++ KSKQLA +  A    ER+ PEYI ++  N    FV
Sbjct: 121 VRVNGKKVNIGSYLVKEEDSIEIRDKSKQLAIIDIALANKEREAPEYIQMDEKNKKFKFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   ++VPYP++M+PNLV+E+YSR
Sbjct: 181 RTP-KFEEVPYPIVMEPNLVIEYYSR 205


>gi|188535254|ref|YP_001909051.1| 30S ribosomal protein S4 [Erwinia tasmaniensis Et1/99]
 gi|300718681|ref|YP_003743484.1| 30S ribosomal protein S4 [Erwinia billingiae Eb661]
 gi|226699063|sp|B2VK72|RS4_ERWT9 RecName: Full=30S ribosomal protein S4
 gi|188030296|emb|CAO98185.1| 30S ribosomal protein S4 [Erwinia tasmaniensis Et1/99]
 gi|299064517|emb|CAX61637.1| 30S ribosomal protein S4 [Erwinia billingiae Eb661]
          Length = 206

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRTYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR V+I SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKSIMVNGRVVSIASYQVTPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|83592040|ref|YP_425792.1| 30S ribosomal protein S4 [Rhodospirillum rubrum ATCC 11170]
 gi|90101712|sp|Q2RWJ0|RS4_RHORT RecName: Full=30S ribosomal protein S4
 gi|83574954|gb|ABC21505.1| SSU ribosomal protein S4P [Rhodospirillum rubrum ATCC 11170]
          Length = 204

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 135/206 (65%), Positives = 166/206 (80%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M KR +SKHKIDRR+G NLWGRPKSP+N R YGPG HGQRR+ KPS FG+QL AKQK+K 
Sbjct: 1   MGKRLNSKHKIDRRLGVNLWGRPKSPINKREYGPGEHGQRRR-KPSDFGIQLMAKQKLKG 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+ISEK FR  ++EA   RGDTS NLIS LE+RLD +VYR K VPT+F++RQ +NH H
Sbjct: 60  YYGNISEKAFRKYYEEASSRRGDTSENLISILETRLDAVVYRMKIVPTVFSSRQIINHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR V++ SYR +EGDVIEVK+KS+Q+  +LEA Q  ERD+PEYI+++  +   TF+
Sbjct: 120 ILVNGRRVSVASYRVQEGDVIEVKEKSRQMPLILEALQSHERDIPEYITMDLAHAKGTFL 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P  L+DVPYPV M+PNLVVEFYSR
Sbjct: 180 RAP-KLEDVPYPVQMEPNLVVEFYSR 204


>gi|37528520|ref|NP_931865.1| 30S ribosomal protein S4 [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|41017820|sp|Q7MYH4|RS4_PHOLL RecName: Full=30S ribosomal protein S4
 gi|36787958|emb|CAE17075.1| 30S ribosomal protein S4 [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 206

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+S LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEATRLKGNTGENLLSLLEGRLDNVVYRMGFGATRAESRQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ V++KSK+ + +  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQREKPTWLEVDAVKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERAD---LSADINEHLIVELYSK 206


>gi|160883039|ref|ZP_02064042.1| hypothetical protein BACOVA_01002 [Bacteroides ovatus ATCC 8483]
 gi|237717425|ref|ZP_04547906.1| 30S ribosomal protein S4 [Bacteroides sp. D1]
 gi|237718717|ref|ZP_04549198.1| 30S ribosomal protein S4 [Bacteroides sp. 2_2_4]
 gi|260175442|ref|ZP_05761854.1| 30S ribosomal protein S4 [Bacteroides sp. D2]
 gi|262406190|ref|ZP_06082740.1| ribosomal protein S4 [Bacteroides sp. 2_1_22]
 gi|293372094|ref|ZP_06618485.1| ribosomal protein S4 [Bacteroides ovatus SD CMC 3f]
 gi|294644083|ref|ZP_06721860.1| ribosomal protein S4 [Bacteroides ovatus SD CC 2a]
 gi|294806543|ref|ZP_06765382.1| ribosomal protein S4 [Bacteroides xylanisolvens SD CC 1b]
 gi|298483090|ref|ZP_07001271.1| ribosomal protein S4 [Bacteroides sp. D22]
 gi|299144598|ref|ZP_07037666.1| ribosomal protein S4 [Bacteroides sp. 3_1_23]
 gi|315923671|ref|ZP_07919911.1| 30S ribosomal protein S4 [Bacteroides sp. D2]
 gi|156111511|gb|EDO13256.1| hypothetical protein BACOVA_01002 [Bacteroides ovatus ATCC 8483]
 gi|229443408|gb|EEO49199.1| 30S ribosomal protein S4 [Bacteroides sp. D1]
 gi|229451849|gb|EEO57640.1| 30S ribosomal protein S4 [Bacteroides sp. 2_2_4]
 gi|262357065|gb|EEZ06155.1| ribosomal protein S4 [Bacteroides sp. 2_1_22]
 gi|292632886|gb|EFF51473.1| ribosomal protein S4 [Bacteroides ovatus SD CMC 3f]
 gi|292640607|gb|EFF58848.1| ribosomal protein S4 [Bacteroides ovatus SD CC 2a]
 gi|294446238|gb|EFG14866.1| ribosomal protein S4 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085403|emb|CBK66926.1| SSU ribosomal protein S4P [Bacteroides xylanisolvens XB1A]
 gi|298270834|gb|EFI12414.1| ribosomal protein S4 [Bacteroides sp. D22]
 gi|298515089|gb|EFI38970.1| ribosomal protein S4 [Bacteroides sp. 3_1_23]
 gi|313697546|gb|EFS34381.1| 30S ribosomal protein S4 [Bacteroides sp. D2]
          Length = 201

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI S+  K G +I V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGEVVNIPSFAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDEASKVGKML 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|317503955|ref|ZP_07961963.1| 30S ribosomal protein S4 [Prevotella salivae DSM 15606]
 gi|315664981|gb|EFV04640.1| 30S ribosomal protein S4 [Prevotella salivae DSM 15606]
          Length = 201

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LE RLD +VYR    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLECRLDNVVYRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI S+  K G V+ V++KSK L  +  A          +I  + +     F+
Sbjct: 119 ITVDGKVVNIPSFAVKPGMVVAVREKSKSLEVIEAALAGFNHSKYPWIEWDDNAKCGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|305665112|ref|YP_003861399.1| 30S ribosomal protein S4 [Maribacter sp. HTCC2170]
 gi|88709864|gb|EAR02096.1| 30S ribosomal protein S4 [Maribacter sp. HTCC2170]
          Length = 201

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    +SY PG HGQ RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKSKIARKFGEAIFGDDKS-FEKKSYPPGQHGQNRRRGKKSEYAVQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR++F  A+RS+G T   L+   ESRLD +VYR     +   ARQ V+HR
Sbjct: 60  YTYG-ILEKQFRNLFASANRSKGVTGEVLLQLCESRLDNVVYRMGVSTSRRGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK L ++ +A   A   V E+I+ N +    TF
Sbjct: 119 HITVNGELVNIPSYSLKAGDVVGVREKSKSLQTIEDALS-ASGHVYEWITWNSEKKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P  ++    P  ++  L+VE YS+
Sbjct: 178 VSVPERMQ---IPENIKEQLIVELYSK 201


>gi|152972204|ref|YP_001337350.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206575742|ref|YP_002236302.1| ribosomal protein S4 [Klebsiella pneumoniae 342]
 gi|238896793|ref|YP_002921538.1| 30S ribosomal protein S4 [Klebsiella pneumoniae NTUH-K2044]
 gi|262045155|ref|ZP_06018182.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288933290|ref|YP_003437349.1| ribosomal protein S4 [Klebsiella variicola At-22]
 gi|290512092|ref|ZP_06551460.1| 30S ribosomal protein S4 [Klebsiella sp. 1_1_55]
 gi|330002271|ref|ZP_08304265.1| ribosomal protein S4 [Klebsiella sp. MS 92-3]
 gi|172052444|sp|A6TEU9|RS4_KLEP7 RecName: Full=30S ribosomal protein S4
 gi|226699076|sp|B5XNB5|RS4_KLEP3 RecName: Full=30S ribosomal protein S4
 gi|150957053|gb|ABR79083.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206564800|gb|ACI06576.1| ribosomal protein S4 [Klebsiella pneumoniae 342]
 gi|238549120|dbj|BAH65471.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037475|gb|EEW38719.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288888019|gb|ADC56337.1| ribosomal protein S4 [Klebsiella variicola At-22]
 gi|289775882|gb|EFD83882.1| 30S ribosomal protein S4 [Klebsiella sp. 1_1_55]
 gi|328537344|gb|EGF63594.1| ribosomal protein S4 [Klebsiella sp. MS 92-3]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+ K  DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206


>gi|157372753|ref|YP_001480742.1| 30S ribosomal protein S4 [Serratia proteamaculans 568]
 gi|172047788|sp|A8GKH4|RS4_SERP5 RecName: Full=30S ribosomal protein S4
 gi|157324517|gb|ABV43614.1| ribosomal protein S4 [Serratia proteamaculans 568]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKASLELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRMPERTD---LSADINEHLIVELYSK 206


>gi|189465443|ref|ZP_03014228.1| hypothetical protein BACINT_01796 [Bacteroides intestinalis DSM
           17393]
 gi|224537842|ref|ZP_03678381.1| hypothetical protein BACCELL_02729 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|189437717|gb|EDV06702.1| hypothetical protein BACINT_01796 [Bacteroides intestinalis DSM
           17393]
 gi|224520528|gb|EEF89633.1| hypothetical protein BACCELL_02729 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 201

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A+ ++G T   L+  LE RLD IV+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAETAKGITGEILLQLLEGRLDNIVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI S+  K G VI V+++SK L  +  +          ++  + ++ V   +
Sbjct: 119 ITVDGEVVNIPSFAVKPGQVIGVRERSKSLEVIANSLAGFNHSKYPWLEWDDNSKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++ +L+VE YS+
Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201


>gi|167838187|ref|ZP_02465046.1| 30S ribosomal protein S4 [Burkholderia thailandensis MSMB43]
          Length = 207

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + K GDV+ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGIVANIPSQQVKAGDVVSIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207


>gi|16080018|ref|NP_390844.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315235|ref|ZP_03597040.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320153|ref|ZP_03601447.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324434|ref|ZP_03605728.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321312503|ref|YP_004204790.1| 30S ribosomal protein S4 [Bacillus subtilis BSn5]
 gi|133949|sp|P21466|RS4_BACSU RecName: Full=30S ribosomal protein S4; Short=BS4
 gi|143467|gb|AAA22717.1| ribosomal protein S4 [Bacillus subtilis]
 gi|2293319|gb|AAC00397.1| ribosomal protein S4 [Bacillus subtilis]
 gi|2635450|emb|CAB14944.1| ribosomal protein S4 (BS4) [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291485397|dbj|BAI86472.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. natto BEST195]
 gi|320018777|gb|ADV93763.1| 30S ribosomal protein S4 [Bacillus subtilis BSn5]
          Length = 200

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  L+SRLD +VY+     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I SY  K G  I V++KS+ L+ + E+ ++    VPEY++ + + +  TF 
Sbjct: 119 ILVDGSRVDIPSYLVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VEFYSR
Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200


>gi|217424827|ref|ZP_03456324.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 576]
 gi|217392283|gb|EEC32308.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 576]
          Length = 207

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   NI S + + GDV+ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAITVNGIVANIPSQQVRAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207


>gi|119773378|ref|YP_926118.1| 30S ribosomal protein S4 [Shewanella amazonensis SB2B]
 gi|152112259|sp|A1S242|RS4_SHEAM RecName: Full=30S ribosomal protein S4
 gi|119765878|gb|ABL98448.1| SSU ribosomal protein S4P [Shewanella amazonensis SB2B]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE+RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ V+VNGR VNI S++    DV+ +++KS+  A +  A +  A+R+ P ++ V+   M
Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206


>gi|16766705|ref|NP_462320.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56415335|ref|YP_152410.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62181921|ref|YP_218338.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161506031|ref|YP_001573143.1| 30S ribosomal protein S4 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|168264703|ref|ZP_02686676.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168468027|ref|ZP_02701864.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194445278|ref|YP_002042667.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194447938|ref|YP_002047440.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194472917|ref|ZP_03078901.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194734012|ref|YP_002116359.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197247634|ref|YP_002148336.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197262156|ref|ZP_03162230.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198244329|ref|YP_002217379.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387686|ref|ZP_03214298.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204931411|ref|ZP_03222080.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205354956|ref|YP_002228757.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858658|ref|YP_002245309.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238913869|ref|ZP_04657706.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|3914907|sp|O54297|RS4_SALTY RecName: Full=30S ribosomal protein S4
 gi|62287196|sp|Q5PK09|RS4_SALPA RecName: Full=30S ribosomal protein S4
 gi|75505522|sp|Q57J55|RS4_SALCH RecName: Full=30S ribosomal protein S4
 gi|189045396|sp|A9MN71|RS4_SALAR RecName: Full=30S ribosomal protein S4
 gi|226695074|sp|B4TXB9|RS4_SALSV RecName: Full=30S ribosomal protein S4
 gi|226699114|sp|B5F7S2|RS4_SALA4 RecName: Full=30S ribosomal protein S4
 gi|226699115|sp|B5FJJ1|RS4_SALDC RecName: Full=30S ribosomal protein S4
 gi|226699116|sp|B5R1F3|RS4_SALEP RecName: Full=30S ribosomal protein S4
 gi|226699117|sp|B5RH39|RS4_SALG2 RecName: Full=30S ribosomal protein S4
 gi|226699118|sp|B4TJY6|RS4_SALHS RecName: Full=30S ribosomal protein S4
 gi|226699119|sp|B4SUR7|RS4_SALNS RecName: Full=30S ribosomal protein S4
 gi|2780215|emb|CAA11203.1| ribosomal protein S4 [Salmonella typhimurium]
 gi|16421972|gb|AAL22279.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56129592|gb|AAV79098.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62129554|gb|AAX67257.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|160867378|gb|ABX24001.1| hypothetical protein SARI_04212 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|194403941|gb|ACF64163.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194406242|gb|ACF66461.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459281|gb|EDX48120.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194709514|gb|ACF88735.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195628917|gb|EDX48327.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197211337|gb|ACH48734.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197240411|gb|EDY23031.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197938845|gb|ACH76178.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199604784|gb|EDZ03329.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204319839|gb|EDZ05049.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205274737|emb|CAR39793.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205346870|gb|EDZ33501.1| ribosomal protein S4 [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206710461|emb|CAR34819.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261248573|emb|CBG26411.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267995625|gb|ACY90510.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159959|emb|CBW19478.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914439|dbj|BAJ38413.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087861|emb|CBY97624.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322615043|gb|EFY11967.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617330|gb|EFY14231.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625552|gb|EFY22377.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626394|gb|EFY23203.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632094|gb|EFY28847.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635027|gb|EFY31750.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643272|gb|EFY39839.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646644|gb|EFY43151.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649990|gb|EFY46409.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652707|gb|EFY49047.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659536|gb|EFY55780.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665522|gb|EFY61709.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670416|gb|EFY66555.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670489|gb|EFY66623.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675065|gb|EFY71148.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681602|gb|EFY77631.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685946|gb|EFY81935.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716407|gb|EFZ07978.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323131774|gb|ADX19204.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195816|gb|EFZ80989.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196428|gb|EFZ81579.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202333|gb|EFZ87378.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207318|gb|EFZ92268.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211246|gb|EFZ96091.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216045|gb|EGA00776.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223464|gb|EGA07792.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226806|gb|EGA10996.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231832|gb|EGA15942.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233215|gb|EGA17310.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237282|gb|EGA21347.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245517|gb|EGA29516.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249023|gb|EGA32945.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250646|gb|EGA34527.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256875|gb|EGA40589.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263024|gb|EGA46571.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266024|gb|EGA49519.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272781|gb|EGA56184.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326625160|gb|EGE31505.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326630105|gb|EGE36448.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+ R P           +  +L+VE YS+
Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206


>gi|152986119|ref|YP_001346247.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa PA7]
 gi|171460894|sp|A6UZL2|RS4_PSEA7 RecName: Full=30S ribosomal protein S4
 gi|150961277|gb|ABR83302.1| ribosomal protein S4 [Pseudomonas aeruginosa PA7]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HGQ R+ + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQ-RRGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++EA R +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQEASRRKGSTGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ K GDV+ +++KS+    + +A +L  +R   E++ V+ D  
Sbjct: 119 SHKAITVNGQTVNIPSYQVKAGDVVAIREKSRNQLRIAQALELCGQRGRVEWVEVDLDKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P+          +  NL+VE YS+
Sbjct: 179 TGTFKSVPARSD---LSADINENLIVELYSK 206


>gi|315178982|gb|ADT85896.1| 30S ribosomal protein S4 [Vibrio furnissii NCTC 11218]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S+     DV+ +++K+K+ + +  A ++AE R+ P +I V+  +M
Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDASSM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206


>gi|319778700|ref|YP_004129613.1| SSU ribosomal protein S4p (S9e) [Taylorella equigenitalis MCE9]
 gi|317108724|gb|ADU91470.1| SSU ribosomal protein S4p (S9e) [Taylorella equigenitalis MCE9]
          Length = 207

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  + P++++      PG HG+   ++ S +G QLR KQ
Sbjct: 1   MARYTGPKCKLSRREGIDLFLKSARRPLDSKCKFESKPGQHGRTSGARTSDYGTQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H  + +NG+  +I S     GDV+ V++KSK    + ++ +LAE    PE++SV     
Sbjct: 120 SHGAIELNGKKADIPSMIVNAGDVVSVREKSKGQIRIKDSLELAESLSFPEWVSVEPKEF 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF ++P           +  +L+VE YSR
Sbjct: 180 KGTFKQVPDRAD---VARDINESLIVELYSR 207


>gi|197364265|ref|YP_002143902.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|226695073|sp|B5BGW2|RS4_SALPK RecName: Full=30S ribosomal protein S4
 gi|197095742|emb|CAR61312.1| 30S ribosomal subunit protein S4 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQISPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+ R P           +  +L+VE YS+
Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206


>gi|281423813|ref|ZP_06254726.1| ribosomal protein S4 [Prevotella oris F0302]
 gi|281402040|gb|EFB32871.1| ribosomal protein S4 [Prevotella oris F0302]
          Length = 201

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI S+  K G VI V++KSK L  +  A          +I  + ++    F+
Sbjct: 119 ITVDGKVVNIPSFAVKPGMVIAVREKSKSLEVIEAALAGFNHSKYPWIEWDDNSKCGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|209521361|ref|ZP_03270074.1| ribosomal protein S4 [Burkholderia sp. H160]
 gi|209498181|gb|EDZ98323.1| ribosomal protein S4 [Burkholderia sp. H160]
          Length = 207

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRLKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V H+ + VNG   NI S + K GDV+ V+++ ++ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVGHKAITVNGVVSNIPSMQVKAGDVVAVREQKRKQARIIEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF + P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQKPERSD---IAGDINESLIVELYSR 207


>gi|157377427|ref|YP_001476027.1| 30S ribosomal protein S4 [Shewanella sediminis HAW-EB3]
 gi|189045400|sp|A8G1C6|RS4_SHESH RecName: Full=30S ribosomal protein S4
 gi|157319801|gb|ABV38899.1| ribosomal protein S4 [Shewanella sediminis HAW-EB3]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 130/211 (61%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R++G+T  NL++ LE+RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRTYGVL-EKQFRNYYKDAARTKGNTGENLLTLLETRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNG  VNI S++    DVI +++KSK+ A ++ A ++A +R+ P ++ V++  M
Sbjct: 119 SHKSIMVNGSVVNIPSFKVSANDVISIREKSKKQARIIAALEVASQREKPTWVEVDNTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206


>gi|317494318|ref|ZP_07952732.1| ribosomal protein S4 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917568|gb|EFV38913.1| ribosomal protein S4 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 206

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNGR VNI SY+    DV+ V++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAVVVNGRVVNIASYQVSPNDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +  +L+VE YS+
Sbjct: 179 EGVFKRNPERSD---LSADINEHLIVELYSK 206


>gi|121603259|ref|YP_980588.1| 30S ribosomal protein S4 [Polaromonas naphthalenivorans CJ2]
 gi|152112243|sp|A1VJ39|RS4_POLNA RecName: Full=30S ribosomal protein S4
 gi|120592228|gb|ABM35667.1| SSU ribosomal protein S4P [Polaromonas naphthalenivorans CJ2]
          Length = 207

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S +GLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSISDKAKFDSK---PGQHGRTSGTRTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+EADR RG+T  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEEADRRRGNTGANLLSVLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GDVI V+ KSK+   + EA +LA++  +P ++ VN 
Sbjct: 117 QLVSHKAMTVNGQSVNIPSYMVKAGDVIAVRDKSKKQTRIAEALELAKQVGLPAWVDVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D    TF ++P   +   +   +  +L+VE YSR
Sbjct: 177 DKGEGTFKKVPDRDE---FAADINESLIVELYSR 207


>gi|225010541|ref|ZP_03701012.1| ribosomal protein S4 [Flavobacteria bacterium MS024-3C]
 gi|225005370|gb|EEG43321.1| ribosomal protein S4 [Flavobacteria bacterium MS024-3C]
          Length = 201

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI RR GE ++G  KS    R++ PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARRFGEAIFGEDKS-FEKRNFPPGQHGNNRRRGKESEYKVQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR+IF +A+RS+G T   L+ F ESRLD +VYR     +   ARQ V+HR
Sbjct: 60  YTYG-ILEKQFRNIFAKANRSKGVTGEVLLQFCESRLDNVVYRMGVSTSRSGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK L ++ +A  ++  +V E+I+ N + M  +F
Sbjct: 119 HITVNGSIVNIPSYSLKAGDVVGVREKSKSLQTISDALSVSS-NVYEWITWNSEKMEGSF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P  L+    P  ++  L+VE YS+
Sbjct: 178 VAVPERLQ---IPENIKEQLIVELYSK 201


>gi|15615771|ref|NP_244075.1| 30S ribosomal protein S4 [Bacillus halodurans C-125]
 gi|26399508|sp|Q9K7Z8|RS4_BACHD RecName: Full=30S ribosomal protein S4
 gi|10175832|dbj|BAB06928.1| 30S ribosomal protein S4 [Bacillus halodurans C-125]
          Length = 200

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPTWKISRRLGISLSGTGKE-LQKRPYAPGQHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR IF +A +  G    N +  LESRLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-VNERQFRRIFNDAGKMAGIHGENFMILLESRLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SYR K G VI V++KS+ L  + E+ +  +  VP Y++ + D +  T+ 
Sbjct: 119 ITVDGQRVDIPSYRVKPGQVIGVREKSRNLQVIKESLESNDF-VPAYVTFDADKLEGTYS 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VEFYSR
Sbjct: 178 RFPERSE---LPAEITEALIVEFYSR 200


>gi|325856044|ref|ZP_08171933.1| ribosomal protein S4 [Prevotella denticola CRIS 18C-A]
 gi|327313216|ref|YP_004328653.1| 30S ribosomal protein S4 [Prevotella denticola F0289]
 gi|325483716|gb|EGC86680.1| ribosomal protein S4 [Prevotella denticola CRIS 18C-A]
 gi|326946115|gb|AEA22000.1| ribosomal protein S4 [Prevotella denticola F0289]
          Length = 201

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  +  +++ PG HG  R+ K S +G QL  KQK K 
Sbjct: 1   MARYIGPKSRIARRFGEPIFGADK-VLAKKNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F +A ++ G T   L+  LESRLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-ERQFRNLFDKAAKADGITGEVLLQSLESRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNG  V I SY+ K GDV+ V++K+K L  +  A          ++  + +     F+
Sbjct: 119 IVVNGNVVGIASYQVKAGDVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDENAKCGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HRPDRAD---IPENIKEQLIVELYSK 201


>gi|258512643|ref|YP_003186077.1| 30S ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479369|gb|ACV59688.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 208

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  V+ R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MARYTGPVCRLCRREGIKLYLKGERCFSEKCAVDKRPYAPGQHGQGRKRTTEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++YYG + E +F   ++EA R RG T   L+  LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQKARRYYGVL-ENQFERYYEEAARRRGVTGETLLQLLESRLDNVVYRLGFAASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+ VNGR V+I S+  KEGDV+ V++KS+  A + E ++L   R +P ++ ++ +
Sbjct: 119 LVRHGHIQVNGRRVDIPSFLVKEGDVVSVREKSRDNARLKELAELIPSRTIPAWLELDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N  A  +R P+  +       +Q   +VEFYSR
Sbjct: 179 NWTAKVLRRPARDE---IDAPVQEQQIVEFYSR 208


>gi|253701896|ref|YP_003023085.1| 30S ribosomal protein S4 [Geobacter sp. M21]
 gi|259495281|sp|C6E4N1|RS4_GEOSM RecName: Full=30S ribosomal protein S4
 gi|251776746|gb|ACT19327.1| ribosomal protein S4 [Geobacter sp. M21]
          Length = 208

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  +  RSY PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYTGPSCRLCRREGSELFLKGERCYTDKCAIKRRSYPPGQHGQGR-IKVSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR  F+ ADR +G T  NL+  LE RLD + YR  F  +   ARQ
Sbjct: 60  KQKVRRIYG-ILENQFRGYFETADRMKGVTGENLLFILERRLDNVAYRLGFATSRDEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  +NGR VNI S + K GDV+++++KS+++A++ E+ + +  R +P+++ +  D
Sbjct: 119 LVRHGHFTLNGRKVNIPSLQVKAGDVLQLREKSRKVAAISESLEGVVRRGIPQWLELEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P   +D+  P  +Q  L+VE YS+
Sbjct: 179 AFKGTVKAMPVR-EDITMP--IQEQLIVELYSK 208


>gi|226953895|ref|ZP_03824359.1| 30S ribosomal protein S4 [Acinetobacter sp. ATCC 27244]
 gi|294651610|ref|ZP_06728914.1| 30S ribosomal protein S4 [Acinetobacter haemolyticus ATCC 19194]
 gi|226835378|gb|EEH67761.1| 30S ribosomal protein S4 [Acinetobacter sp. ATCC 27244]
 gi|292822459|gb|EFF81358.1| 30S ribosomal protein S4 [Acinetobacter haemolyticus ATCC 19194]
          Length = 208

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHNKAPGQHGQARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRSEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P ++ V+H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMEVDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208


>gi|29348111|ref|NP_811614.1| 30S ribosomal protein S4 [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569617|ref|ZP_04847027.1| 30S ribosomal protein S4 [Bacteroides sp. 1_1_6]
 gi|298386205|ref|ZP_06995762.1| ribosomal protein S4 [Bacteroides sp. 1_1_14]
 gi|41017839|sp|Q8A4A1|RS4_BACTN RecName: Full=30S ribosomal protein S4
 gi|29340014|gb|AAO77808.1| 30S ribosomal protein S4 [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841636|gb|EES69717.1| 30S ribosomal protein S4 [Bacteroides sp. 1_1_6]
 gi|298261433|gb|EFI04300.1| ribosomal protein S4 [Bacteroides sp. 1_1_14]
          Length = 201

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGVQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  ++G T   L+  LE RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAATAKGITGEVLLQLLEGRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI S+  K G +I V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGEVVNIPSFAVKPGQLIGVRERSKSLEVIANSLAGFNHSKYAWLEWDETSKVGKML 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|289550525|ref|YP_003471429.1| SSU ribosomal protein S4p (S9e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658019|ref|ZP_07910892.1| 30S ribosomal protein S4 [Staphylococcus lugdunensis M23590]
 gi|289180057|gb|ADC87302.1| SSU ribosomal protein S4p (S9e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496909|gb|EFU85231.1| 30S ribosomal protein S4 [Staphylococcus lugdunensis M23590]
          Length = 200

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +G+QLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGMQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ V H H
Sbjct: 60  LYG-MTERQFRNTFDIAAKQYGVHGENFMILLASRLDAVVYALGLARTRRQARQLVGHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+GR V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + DN+  TFV
Sbjct: 119 IEVDGRRVDIPSYSLKPGQVITVREKSQNLDIIKESVEI-NNFVPEYLDFDADNLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|73542839|ref|YP_297359.1| 30S ribosomal protein S4 [Ralstonia eutropha JMP134]
 gi|90101711|sp|Q46WG8|RS4_RALEJ RecName: Full=30S ribosomal protein S4
 gi|72120252|gb|AAZ62515.1| SSU ribosomal protein S4P [Ralstonia eutropha JMP134]
          Length = 207

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGEKLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDVI ++++SK+   + EA  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQTLNVPSAQIKSGDVITIREQSKKQVRIAEALSLAEQSGFPTWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPDRAD---ISGDINESLIVELYSR 207


>gi|118579144|ref|YP_900394.1| 30S ribosomal protein S4 [Pelobacter propionicus DSM 2379]
 gi|152112242|sp|A1ALW6|RS4_PELPD RecName: Full=30S ribosomal protein S4
 gi|118501854|gb|ABK98336.1| SSU ribosomal protein S4P [Pelobacter propionicus DSM 2379]
          Length = 208

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K  +  R+Y PG HGQ R    +Y G+QLR 
Sbjct: 1   MARYTGPSCRLCRRENMELFLKGDRCYTDKCAIKRRNYPPGQHGQGRTKNSAY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR  F EADR +G T  NL+S LE RLD +VYR  F  +   +RQ
Sbjct: 60  KQKVRRIYG-LMENQFRGYFAEADRMKGVTGENLLSLLERRLDNVVYRLGFASSRSESRQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NG+ V+I S + + GDVIE+++KS+++ S+ +A    A R +P+++ ++ D
Sbjct: 119 LVRHGHFTLNGKKVDIPSIQTRVGDVIELREKSRKIVSINDALDAVARRGIPQWLELDRD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P   +DV  P  +Q  LVVE YS+
Sbjct: 179 AFKGNLKALPVR-EDVTTP--IQEQLVVELYSK 208


>gi|325287073|ref|YP_004262863.1| 30S ribosomal protein S4 [Cellulophaga lytica DSM 7489]
 gi|324322527|gb|ADY29992.1| ribosomal protein S4 [Cellulophaga lytica DSM 7489]
          Length = 201

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 123/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    ++Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGEDKS-FEKKNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR++F +A+ S+G T   L+   ESRLD +VYR     +   ARQ V+HR
Sbjct: 60  YSYG-ILEKQFRNLFAKANSSKGVTGEVLLQLCESRLDNVVYRMGISNSRRGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK L+++ +A     R V E+I+ N +    T+
Sbjct: 119 HITVNGELVNIPSYSLKPGDVVGVREKSKSLSAIQDALAANSR-VYEWITWNSEKKEGTY 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V IP     V  P  ++  L+VE YS+
Sbjct: 178 VSIPER---VQIPENIKEQLIVELYSK 201


>gi|152977022|ref|YP_001376539.1| 30S ribosomal protein S4 [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|171769250|sp|A7GTT6|RS4_BACCN RecName: Full=30S ribosomal protein S4
 gi|152025774|gb|ABS23544.1| ribosomal protein S4 [Bacillus cytotoxicus NVH 391-98]
          Length = 200

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS+ LA + EA ++    VPEY++ + D + ATF 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSRNLAVIKEAMEV-NNFVPEYLTFDADKLEATFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200


>gi|300690185|ref|YP_003751180.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum PSI07]
 gi|299077245|emb|CBJ49871.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum PSI07]
          Length = 207

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  +L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGESLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQVKAGDVVAIREKSKKQVRIAESLSLAEQTGFPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF + P           +  +L+VE YSR
Sbjct: 177 KKMEGTFKQAPDRAD---IAGDINESLIVELYSR 207


>gi|295135677|ref|YP_003586353.1| 30S ribosomal protein S4 [Zunongwangia profunda SM-A87]
 gi|294983692|gb|ADF54157.1| 30S ribosomal protein S4 [Zunongwangia profunda SM-A87]
          Length = 201

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR++F++A RS+G T   L+   ESRLD +V+R    P+  AARQ V+HR
Sbjct: 60  YTYG-ILERQFRNMFEKATRSQGITGEVLLQLCESRLDNVVFRLGVAPSRRAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY+ K GDV+ V++KSK L  V ++      +V E+I+ N++    TF
Sbjct: 119 HITVNGELVNIPSYQLKAGDVVGVREKSKSLQVVQDSLA-NNSNVYEWITWNNETKQGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     V  P  +    +VE YS+
Sbjct: 178 VSVPGR---VQIPENINEQFIVELYSK 201


>gi|53803440|ref|YP_114764.1| 30S ribosomal protein S4 [Methylococcus capsulatus str. Bath]
 gi|61215442|sp|Q605D6|RS4_METCA RecName: Full=30S ribosomal protein S4
 gi|53757201|gb|AAU91492.1| ribosomal protein S4 [Methylococcus capsulatus str. Bath]
          Length = 206

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ + +   + ++      PG HGQ+R     Y   QLR KQ
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSRGKSLESKCKLDQPPGQHGQKRPRLSDYAA-QLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ + EA R +G T  NL++ LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KLRRIYG-IMERQFRNYYAEASRRKGSTGENLLTLLESRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + +NGR++NI SY+ + GDV+E++ K+K    V +A Q+ E+   P ++ V+  +M
Sbjct: 119 SHKAINLNGRTLNIPSYQVQSGDVVEIRDKAKSQGRVKDALQVTEQYGFPSWVDVDVKSM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F   P   +       +   LVVE YS+
Sbjct: 179 KGIFKSAPERSE---LGSDINEQLVVELYSK 206


>gi|261823208|ref|YP_003261314.1| 30S ribosomal protein S4 [Pectobacterium wasabiae WPP163]
 gi|261607221|gb|ACX89707.1| ribosomal protein S4 [Pectobacterium wasabiae WPP163]
          Length = 206

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR V+I SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVSIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +  +L+VE YS+
Sbjct: 179 EGVFKRIPERTD---LSADINEHLIVELYSK 206


>gi|126454036|ref|YP_001068009.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106a]
 gi|167847640|ref|ZP_02473148.1| 30S ribosomal protein S4 [Burkholderia pseudomallei B7210]
 gi|242314939|ref|ZP_04813955.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106b]
 gi|171855208|sp|A3P088|RS4_BURP0 RecName: Full=30S ribosomal protein S4
 gi|126227678|gb|ABN91218.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106a]
 gi|242138178|gb|EES24580.1| 30S ribosomal protein S4 [Burkholderia pseudomallei 1106b]
          Length = 207

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRISGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ V VNG   NI S + K GDV+ +++K+K+ A ++EA  LAE+  +P +++V+ 
Sbjct: 117 QLVSHKAVTVNGIVANIPSQQVKAGDVVAIREKAKKQARIVEALSLAEQGGMPSWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207


>gi|299065440|emb|CBJ36609.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum CMR15]
          Length = 207

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKSGDVVTIREKSKKQVRIAESLSLAEQTGFPGWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF + P           +  +L+VE YSR
Sbjct: 177 KKMEGTFKQAPDRAD---IAGDINESLIVELYSR 207


>gi|32034695|ref|ZP_00134833.1| COG0522: Ribosomal protein S4 and related proteins [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209247|ref|YP_001054472.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae L20]
 gi|165977220|ref|YP_001652813.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190151138|ref|YP_001969663.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303250036|ref|ZP_07336238.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303253210|ref|ZP_07339359.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246713|ref|ZP_07528783.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307251082|ref|ZP_07533006.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307253468|ref|ZP_07535339.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307255698|ref|ZP_07537502.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307257882|ref|ZP_07539638.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307260150|ref|ZP_07541860.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307264487|ref|ZP_07546072.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|322515611|ref|ZP_08068590.1| 30S ribosomal protein S4 [Actinobacillus ureae ATCC 25976]
 gi|152060927|sp|A3N381|RS4_ACTP2 RecName: Full=30S ribosomal protein S4
 gi|226697792|sp|B3GZ35|RS4_ACTP7 RecName: Full=30S ribosomal protein S4
 gi|226697793|sp|B0BSV5|RS4_ACTPJ RecName: Full=30S ribosomal protein S4
 gi|126098039|gb|ABN74867.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165877321|gb|ABY70369.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189916269|gb|ACE62521.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|302647892|gb|EFL78099.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302651099|gb|EFL81253.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306852413|gb|EFM84648.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306856912|gb|EFM89044.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859147|gb|EFM91189.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306861375|gb|EFM93365.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306863612|gb|EFM95539.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865796|gb|EFM97674.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306870184|gb|EFN01943.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|322118321|gb|EFX90596.1| 30S ribosomal protein S4 [Actinobacillus ureae ATCC 25976]
          Length = 208

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54
           M++    K K+ RR G +L+ +     + ++        PG HG  RK + S +G QLR 
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E++FR+ + EA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKVRRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V+H+ ++VNGR VNI SY+    DV+ V++KSK+ A +  + +LA +R+ P ++ V+  
Sbjct: 119 LVSHKSIVVNGRVVNIPSYQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDAT 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F R P           +  +L+VE YS+
Sbjct: 179 KMEGVFKRTPERSD---LSADINEHLIVELYSK 208


>gi|300728417|ref|ZP_07061779.1| ribosomal protein S4 [Prevotella bryantii B14]
 gi|299774336|gb|EFI70966.1| ribosomal protein S4 [Prevotella bryantii B14]
          Length = 202

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  ++ R++ PG HG  R+ K S +G QL  KQK K 
Sbjct: 1   MARYIGPKSRIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKQSEYGAQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F +A +S G T   L+  LESRLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-ERQFRNMFDKAAKSDGITGEVLLQELESRLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SY  K G VI V++K+K L  +  A          +I  + +     F+
Sbjct: 119 IVVDGAVVNIPSYSVKPGQVIGVREKAKSLEVIEGALAGFNHSKYPWIEWDENTKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HRPERAD---IPENIKEQLIVELYSK 201


>gi|312968379|ref|ZP_07782589.1| ribosomal protein S4 [Escherichia coli 2362-75]
 gi|312287204|gb|EFR15114.1| ribosomal protein S4 [Escherichia coli 2362-75]
          Length = 206

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VN R VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNDRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206


>gi|323492143|ref|ZP_08097305.1| 30S ribosomal protein S4 [Vibrio brasiliensis LMG 20546]
 gi|323313704|gb|EGA66806.1| 30S ribosomal protein S4 [Vibrio brasiliensis LMG 20546]
          Length = 206

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VNI S++    DV+ +++K+KQ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKAILVNGKVVNIPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDGGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206


>gi|243180|gb|AAB21091.1| ribosomal protein S4 [Bacillus stearothermophilus, Peptide, 198 aa]
          Length = 198

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/205 (39%), Positives = 117/205 (57%), Gaps = 7/205 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++      KI RR+G +L G  K  +  R Y PG HG  ++    Y GLQL+ KQK++  
Sbjct: 1   ARYTGPMWKISRRLGISLSGTGKE-LQKRPYPPGQHGPGQRKLSEY-GLQLQEKQKLRHM 58

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++FR  F+EA +  G    N +  LESRLD +VYR     T   ARQ V H H+
Sbjct: 59  YG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGHI 117

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181
           +V+G  VNI SYR K G  I V++KS+ L  + EA + A   +P+Y+S + + M  T+ R
Sbjct: 118 IVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNYIPDYLSFDPEKMEGTYTR 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P   +    P  +   L+VEFYSR
Sbjct: 177 LPERSE---LPAEINEALIVEFYSR 198


>gi|288929314|ref|ZP_06423159.1| ribosomal protein S4 [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329416|gb|EFC68002.1| ribosomal protein S4 [Prevotella sp. oral taxon 317 str. F0108]
          Length = 201

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G  L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKTSEYGAMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKASGITGEVLLQNLESRLDNVVFRLGLAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G+ VNI SY  K G V+ V++K+K L  +  A          +I  +  +    F+
Sbjct: 119 IVVDGKVVNIPSYSVKAGQVVGVREKAKSLEVIEAALAGFNHSKYPWIEWDDASKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|304384301|ref|ZP_07366712.1| 30S ribosomal protein S4 [Prevotella marshii DSM 16973]
 gi|304334617|gb|EFM00899.1| 30S ribosomal protein S4 [Prevotella marshii DSM 16973]
          Length = 201

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLESRLDNVVFRMGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G+ VNI SY  K G VI V++KSK L  + EA          +I  ++++    F+
Sbjct: 119 IVVDGQVVNIPSYAVKPGQVIGVREKSKSLEVIEEALAGFNHSKYPWIEWDNNSKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPESIKEQLIVELYSK 201


>gi|322831096|ref|YP_004211123.1| ribosomal protein S4 [Rahnella sp. Y9602]
 gi|321166297|gb|ADW71996.1| ribosomal protein S4 [Rahnella sp. Y9602]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD ++YR  F  T   +RQ V
Sbjct: 60  KVRRTYGVL-ERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVIYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +  +L+VE YS+
Sbjct: 179 EGVFKRMPERTD---LSSDINEHLIVELYSK 206


>gi|91786410|ref|YP_547362.1| 30S ribosomal protein S4 [Polaromonas sp. JS666]
 gi|123060350|sp|Q12G78|RS4_POLSJ RecName: Full=30S ribosomal protein S4
 gi|91695635|gb|ABE42464.1| SSU ribosomal protein S4P [Polaromonas sp. JS666]
          Length = 207

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S FGLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRAISDKAKFDSK---PGQHGRTSGTRTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEEADRRKGNTGANLLFILESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG SVNI SY  K GDVI V+ KSK+   V EA +LA++  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGNSVNIPSYMVKTGDVIAVRDKSKKQTRVTEALELAKQVGLPAWVDVNA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D     F ++P   +   +   +  +L+VE YSR
Sbjct: 177 DKGEGVFKKVPDRDE---FAADVNESLIVELYSR 207


>gi|309782859|ref|ZP_07677579.1| ribosomal protein S4 [Ralstonia sp. 5_7_47FAA]
 gi|308918283|gb|EFP63960.1| ribosomal protein S4 [Ralstonia sp. 5_7_47FAA]
          Length = 207

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDVI +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKTGDVIAIREKSKKQVRIAESLTLAEQTGFPTWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF +IP           +  +L+VE YSR
Sbjct: 177 KKMEGTFKQIPDRAD---IAGDINESLIVELYSR 207


>gi|311748488|ref|ZP_07722273.1| ribosomal protein S4 [Algoriphagus sp. PR1]
 gi|126577005|gb|EAZ81253.1| ribosomal protein S4 [Algoriphagus sp. PR1]
          Length = 201

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE + G  K  +  ++Y PG HG+ R+ K S + +QL  KQK K 
Sbjct: 1   MARYTGPKAKIARKFGEPIEGHSK-ALQKKNYPPGQHGRGRRKKQSEYAIQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I E++F  +F  A R  G T  NL+  LE+RLD  VYR    PT   ARQ V+H+H
Sbjct: 60  IYG-ILERQFAKMFDIASRKSGITGENLLQLLEARLDNTVYRMGISPTRRGARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  VNI SY  K GD++ V+++SK L ++  +      +   ++  +  ++   FV
Sbjct: 119 ILVNGELVNIPSYSLKPGDIVSVRERSKSLEAITNSLAGRGANKYSWLEWDGASLSGKFV 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +PS       P  ++  L+VE YS+
Sbjct: 179 SVPSRDD---IPENVKEQLIVELYSK 201


>gi|89902965|ref|YP_525436.1| 30S ribosomal protein S4 [Rhodoferax ferrireducens T118]
 gi|122478015|sp|Q21QP8|RS4_RHOFD RecName: Full=30S ribosomal protein S4
 gi|89347702|gb|ABD71905.1| SSU ribosomal protein S4P [Rhodoferax ferrireducens T118]
          Length = 207

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 132/214 (61%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S FGLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIGDKAKFDSK---PGQHGRTSGARTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+EADR +G+T  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEEADRRKGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GD+I V+ KSK+   ++EA QLA++  +P ++ +N 
Sbjct: 117 QLVSHKAMTVNGKSVNIPSYMVKAGDMIAVRDKSKKQNRIVEALQLAQQVGMPAWVEINA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    TF  +P   +   +   +  +L+VE YSR
Sbjct: 177 EKAEGTFKAVPDRDQ---FAADVNESLIVELYSR 207


>gi|300702805|ref|YP_003744406.1| 30S ribosomal protein S4 [Ralstonia solanacearum CFBP2957]
 gi|299070467|emb|CBJ41762.1| 30S ribosomal subunit protein S4 [Ralstonia solanacearum CFBP2957]
          Length = 207

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 128/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGANLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKAGDVVAIREKSKKQVRIAESLSLAEQSGFPTWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF + P     V     +  +L+VE YSR
Sbjct: 177 KKMEGTFKQAPDR---VDIAGDINESLIVELYSR 207


>gi|302388739|ref|YP_003824560.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646]
 gi|302199367|gb|ADL06937.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646]
          Length = 208

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +      PK  ++ R Y PG HGQ ++    Y GLQLR 
Sbjct: 1   MARYTGPVCRLCRREGMKLYLKGERCYTPKCAIDRRGYAPGQHGQMKRKLSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E++F+  F+EA R +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKAKRIYGVL-ERQFKIYFEEAIRRKGVTGENLLRLLECRLDNVVYRLGFAKSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+ VNGR V I SY+ +E DVI V++KS+ L    E ++  + R VPE++SVN+D
Sbjct: 119 IVRHGHIEVNGRKVTIPSYQVREKDVIAVREKSRSLDFFKEMAEAGKGRIVPEWLSVNYD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    VR+P+        V +Q +L+VE YS+
Sbjct: 179 TLTGEVVRMPNR---EDIDVPIQEHLIVELYSK 208


>gi|126666789|ref|ZP_01737766.1| ribosomal protein S4 [Marinobacter sp. ELB17]
 gi|126628834|gb|EAZ99454.1| ribosomal protein S4 [Marinobacter sp. ELB17]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALDTKCNLETPPGMHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LE+RLD + YR  F  T    RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGVTGENLLQLLEARLDNVAYRMGFGSTRAECRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVN + VNI SY+ K GDV+ V++K+K    V  A  LA  R    ++ V+   M
Sbjct: 119 SHKAILVNDKVVNIPSYQVKPGDVVSVREKAKNQLRVKGALDLASGRAAVSWVDVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +  +P+ ++    P  +  NL+VE YS+
Sbjct: 179 SGVYSSVPTRIE---LPADINENLIVELYSK 206


>gi|170728985|ref|YP_001763011.1| 30S ribosomal protein S4 [Shewanella woodyi ATCC 51908]
 gi|226695076|sp|B1KM36|RS4_SHEWM RecName: Full=30S ribosomal protein S4
 gi|169814332|gb|ACA88916.1| ribosomal protein S4 [Shewanella woodyi ATCC 51908]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 129/211 (61%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R++G+T  NL++ LE+RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRTYGVL-EKQFRNYYKDAARTKGNTGENLLTLLETRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ ++VNG  VNI S++    DVI +++KSK+ A ++ A +  ++R+ P ++ V++  M
Sbjct: 119 SHKSIMVNGSVVNIPSFKVSANDVISIREKSKKQARIIAALEVSSQREKPTWVEVDNTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206


>gi|283788068|ref|YP_003367933.1| 30S ribosomal subunit protein S4 [Citrobacter rodentium ICC168]
 gi|282951522|emb|CBG91221.1| 30S ribosomal subunit protein S4 [Citrobacter rodentium ICC168]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAVMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+ R P           +  +L+VE YS+
Sbjct: 179 EGTYKRKPERSD---LSADINEHLIVELYSK 206


>gi|223042027|ref|ZP_03612208.1| 30S ribosomal protein S4 [Actinobacillus minor 202]
 gi|240948151|ref|ZP_04752554.1| 30S ribosomal protein S4 [Actinobacillus minor NM305]
 gi|198246529|gb|ACH82221.1| 30S ribosomal protein S4 [Actinobacillus minor 202]
 gi|240297504|gb|EER48011.1| 30S ribosomal protein S4 [Actinobacillus minor NM305]
          Length = 208

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54
           M++    K K+ RR G +L+ +     + ++        PG HG  RK + S +G QLR 
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E++FR+ +KEA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKVRRIYG-ILERQFRNYYKEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V+H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LA +R+ P ++ V+  
Sbjct: 119 LVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDAT 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F R P           +  +L+VE YS+
Sbjct: 179 KMEGVFKRTPERSD---LSADINEHLIVELYSK 208


>gi|241664507|ref|YP_002982867.1| 30S ribosomal protein S4 [Ralstonia pickettii 12D]
 gi|240866534|gb|ACS64195.1| ribosomal protein S4 [Ralstonia pickettii 12D]
          Length = 207

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDVI +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKTGDVIAIREKSKKQVRIAESLTLAEQTGFPTWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF ++P           +  +L+VE YSR
Sbjct: 177 KKMEGTFKQVPDRAD---IAGDINESLIVELYSR 207


>gi|10835588|pdb|1FJG|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotics Streptomycin,
           Spectinomycin, And Paromomycin
 gi|13096397|pdb|1HR0|D Chain D, Crystal Structure Of Initiation Factor If1 Bound To The
           30s Ribosomal Subunit
 gi|14278013|pdb|1GIX|G Chain G, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1gix, Contains The 30s Ribosome Subunit,
           Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
           In The File 1giy
 gi|15826123|pdb|1JGO|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826148|pdb|1JGP|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826173|pdb|1JGQ|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|28373702|pdb|1ML5|G Chain G, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|110591326|pdb|2F4V|D Chain D, 30s Ribosome + Designer Antibiotic
          Length = 209

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +      PK  +  R Y PG HGQ+R  +PS + ++LR 
Sbjct: 1   MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG ISE++FR++F+EA + +G T    +  LESRLD +VYR  F  +   ARQ
Sbjct: 61  KQKLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+ VNGR V++ SYR + GD I V +KS+ L  + +  + +  R V  ++S++ +
Sbjct: 120 LVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F+R+P   +D+  PV  Q NLV+EFYSR
Sbjct: 180 GMKGKFLRLPDR-EDLALPV--QENLVIEFYSR 209


>gi|163786165|ref|ZP_02180613.1| 30S ribosomal protein S4 [Flavobacteriales bacterium ALC-1]
 gi|159878025|gb|EDP72081.1| 30S ribosomal protein S4 [Flavobacteriales bacterium ALC-1]
          Length = 201

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ G+ ++G  K     R+Y PG HG  +R+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGQAIFGDDK-AFEKRNYPPGQHGANKRRGKKSEYAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+FR++FK A  ++G T   L+   ESRLD +V+R    PT   ARQ V+HR
Sbjct: 60  YTYGVL-EKQFRNMFKRATAAQGITGEVLLQLCESRLDNVVFRMGVSPTRSGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VN+ SY+ K GDV+ V++KSK L ++  +   +  +V E+I+ N+D M  T+
Sbjct: 119 HITVNGEKVNVPSYQLKAGDVVGVREKSKSLEAITNSLANSS-NVYEWITWNNDTMEGTY 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P+    +  P  +    +VE YS+
Sbjct: 178 VSVPAR---IQIPEQINEQFIVELYSK 201


>gi|221064828|ref|ZP_03540933.1| ribosomal protein S4 [Comamonas testosteroni KF-1]
 gi|220709851|gb|EED65219.1| ribosomal protein S4 [Comamonas testosteroni KF-1]
          Length = 207

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 131/214 (61%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +T+   PG HG+    + S +GLQLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSIADKAKFDTK---PGQHGRTSGQRTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ ADR RG+T  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAADRKRGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  KEGDV+ +++KSK+ A V+EA QL A+   P ++ V+ 
Sbjct: 117 QLVSHKAITVNGQSVNIPSYSVKEGDVVALREKSKKQARVVEALQLAAQVGFPAWVEVSA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D    TF + P   +   +   +  +L+VE YSR
Sbjct: 177 DKAEGTFKKSPDRDE---FAADINESLIVELYSR 207


>gi|261342766|ref|ZP_05970624.1| ribosomal protein S4 [Enterobacter cancerogenus ATCC 35316]
 gi|288314945|gb|EFC53883.1| ribosomal protein S4 [Enterobacter cancerogenus ATCC 35316]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+ K  DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRQPERSD---LSADINEHLIVELYSK 206


>gi|20808633|ref|NP_623804.1| 30S ribosomal protein S4 [Thermoanaerobacter tengcongensis MB4]
 gi|26399396|sp|Q8R7Y1|RS4_THETN RecName: Full=30S ribosomal protein S4
 gi|20517267|gb|AAM25408.1| Ribosomal protein S4 and related proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +       K P+  R Y PG HGQ +K    Y G+QLR 
Sbjct: 1   MGRYLGPSCRLCRREGIKLYLKGEKCYTDKCPLAKRGYAPGQHGQEKKKLTQY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+YYG I E++F   ++ A+R RG T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKLKRYYG-ILERQFVRYYERAERMRGITGENLLQLLERRLDNVVYRLGFAVSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V+H H+ VNG+ V+I SY  K GDVI VK+ S+ +  +    ++  R+VP+++ +N D 
Sbjct: 119 LVSHGHIEVNGKKVDIPSYLVKPGDVISVKESSRSMELIKNNLEMG-RNVPDWLELNKDA 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V +P   + +  PV  Q +L+VE YS+
Sbjct: 178 FEGRVVSLP-RREHIDLPV--QEHLIVELYSK 206


>gi|163752126|ref|ZP_02159331.1| 30S ribosomal protein S4 [Shewanella benthica KT99]
 gi|161327961|gb|EDP99136.1| 30S ribosomal protein S4 [Shewanella benthica KT99]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 129/211 (61%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLDTAPGQHGA-RKTRLSEYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL++ LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARQKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNG  VNI S++    DVI +++KSK+ A ++ A ++A +R+ P ++ V++  M
Sbjct: 119 SHKSIMVNGSVVNIPSFKVSASDVICIREKSKKQARIVAALEVASQREKPTWVEVDNTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206


>gi|282878783|ref|ZP_06287551.1| ribosomal protein S4 [Prevotella buccalis ATCC 35310]
 gi|281299174|gb|EFA91575.1| ribosomal protein S4 [Prevotella buccalis ATCC 35310]
          Length = 201

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S FG  L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEFGAMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A +S G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKSDGITGEVLLQNLECRLDNVVFRMGIAPTRAAARQMVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SY  K G ++ V++K+K L  +  +          +I  + ++    F+
Sbjct: 119 IVVDGSVVNIPSYAVKPGQIVGVREKAKSLEVIEASLAGFNHSKYPWIEWDENSKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++  L+VE YS+
Sbjct: 179 HLPERAD---IPENIKEQLIVELYSK 201


>gi|260909776|ref|ZP_05916470.1| 30S ribosomal protein S4 [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636201|gb|EEX54197.1| 30S ribosomal protein S4 [Prevotella sp. oral taxon 472 str. F0295]
          Length = 201

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G  L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKTSEYGAMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKASGITGEVLLQNLESRLDNVVFRLGLAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G+ VNI SY  K G ++ V++K+K L  +  A          +I  +  +    F+
Sbjct: 119 IVVDGKVVNIPSYSVKAGQIVGVREKAKSLEVIEAALAGFNHSKYPWIEWDDASKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|167587747|ref|ZP_02380135.1| 30S ribosomal protein S4 [Burkholderia ubonensis Bu]
          Length = 207

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG   N+ S + K GDVI +++K+K+ A ++EA  LAE+  +  +++V+ 
Sbjct: 117 QLVSHKAITVNGIVANVPSQQVKAGDVIAIREKAKKQARIVEALSLAEQGGLASWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQMPERAD---IAGDINESLIVELYSR 207


>gi|258625764|ref|ZP_05720643.1| 30S ribosomal protein S4 [Vibrio mimicus VM603]
 gi|261211127|ref|ZP_05925416.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC341]
 gi|262170491|ref|ZP_06038169.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus MB-451]
 gi|262401859|ref|ZP_06078424.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC586]
 gi|258582002|gb|EEW06872.1| 30S ribosomal protein S4 [Vibrio mimicus VM603]
 gi|260839628|gb|EEX66239.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC341]
 gi|261891567|gb|EEY37553.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus MB-451]
 gi|262351831|gb|EEZ00962.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. RC586]
          Length = 206

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S+     DV+ +++K+K+ + +  A ++AE R+ P +I V+ + M
Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDVNTM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206


>gi|258406160|ref|YP_003198902.1| 30S ribosomal protein S4 [Desulfohalobium retbaense DSM 5692]
 gi|257798387|gb|ACV69324.1| ribosomal protein S4 [Desulfohalobium retbaense DSM 5692]
          Length = 208

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   SK ++ RR GE L+ +       K     R+Y PG HG+ RK KPS + +QLR 
Sbjct: 1   MARYTESKCRLCRREGEKLFLKGDRCYTDKCAFERRAYPPGQHGRMRK-KPSDYAIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR+ FK+A+  +G T  NL+  LE+RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVRRLYG-ILENQFRNYFKKAEAQKGVTGTNLLRLLETRLDNVVYRLGFANSREQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  +NGR VNI S + +EGD IEV+++S+++ +  EA + +A R  PE++ V+  
Sbjct: 119 LVRHGHFELNGRRVNIPSLQVREGDAIEVRERSRKVPAFQEAQEVIARRGCPEWLEVDSA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    P   +DV +P  +   L+VE YS+
Sbjct: 179 AFKGAIKAQPQR-EDVTFP--INEQLIVELYSK 208


>gi|226313743|ref|YP_002773637.1| 30S ribosomal protein S4 [Brevibacillus brevis NBRC 100599]
 gi|254764572|sp|C0ZHK9|RS4_BREBN RecName: Full=30S ribosomal protein S4
 gi|226096691|dbj|BAH45133.1| 30S ribosomal protein S4 [Brevibacillus brevis NBRC 100599]
          Length = 199

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 121/206 (58%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    +HK+ RR+G +L G  K     R++ PG HG   + K S +G+QL+ KQK++ 
Sbjct: 1   MSRYTGPRHKLARRLGISLDGTGKDI--KRNFPPGQHGHNNRRKLSEYGIQLQEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G ++EK+FR  F  A +  G    N +  LESRLD +VYR  F PT  AARQ VNH H
Sbjct: 59  MFG-LNEKQFRRTFDNASKMAGVVGENFMKLLESRLDNLVYRMGFAPTRPAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
            LVNG+ VNI SYR + GDVI +++KS+ L  + +A +     +P Y++ N      TF 
Sbjct: 118 FLVNGKKVNIPSYRVQPGDVISIREKSRGLQLIKDALE-GRTFLPNYVTFNDAAAEGTFT 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 177 RLPDREE---MPAEINEVLIVEFYSR 199


>gi|17547713|ref|NP_521115.1| 30S ribosomal protein S4 [Ralstonia solanacearum GMI1000]
 gi|26399428|sp|Q8XV37|RS4_RALSO RecName: Full=30S ribosomal protein S4
 gi|17430018|emb|CAD16703.1| probable 30s ribosomal protein s4 [Ralstonia solanacearum GMI1000]
          Length = 207

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKSGDVVAIREKSKKQVRIAESLSLAEQTGFPGWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF + P           +  +L+VE YSR
Sbjct: 177 KKMEGTFKQAPDRGD---IAGDINESLIVELYSR 207


>gi|242242984|ref|ZP_04797429.1| 30S ribosomal protein S4 [Staphylococcus epidermidis W23144]
 gi|242233585|gb|EES35897.1| 30S ribosomal protein S4 [Staphylococcus epidermidis W23144]
 gi|319401032|gb|EFV89251.1| ribosomal protein S4 [Staphylococcus epidermidis FRI909]
          Length = 200

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + DN+  TFV
Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQDLDIIKESVEI-NNFVPEYLDFDADNLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|299141173|ref|ZP_07034310.1| ribosomal protein S4 [Prevotella oris C735]
 gi|298577133|gb|EFI49002.1| ribosomal protein S4 [Prevotella oris C735]
          Length = 201

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI S+  K G VI V++KSK L  +  A          +I  + ++    F+
Sbjct: 119 ITVDGKVVNIPSFAVKPGMVIAVREKSKSLEVIEVALAGFNHSKYPWIEWDDNSKCGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|27364191|ref|NP_759719.1| 30S ribosomal protein S4 [Vibrio vulnificus CMCP6]
 gi|37678582|ref|NP_933191.1| 30S ribosomal protein S4 [Vibrio vulnificus YJ016]
 gi|320157577|ref|YP_004189956.1| 30S ribosomal protein S4p (S9e) [Vibrio vulnificus MO6-24/O]
 gi|31340392|sp|Q8DE62|RS4_VIBVU RecName: Full=30S ribosomal protein S4
 gi|41017818|sp|Q7MPG5|RS4_VIBVY RecName: Full=30S ribosomal protein S4
 gi|27360309|gb|AAO09246.1| ribosomal protein S4 [Vibrio vulnificus CMCP6]
 gi|37197322|dbj|BAC93162.1| ribosomal protein S4 [Vibrio vulnificus YJ016]
 gi|319932889|gb|ADV87753.1| SSU ribosomal protein S4p (S9e) [Vibrio vulnificus MO6-24/O]
          Length = 206

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ + EA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYAEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+KQ   +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQTRIKAALEVAEQREKPTWIEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206


>gi|282880975|ref|ZP_06289666.1| ribosomal protein S4 [Prevotella timonensis CRIS 5C-B1]
 gi|281305198|gb|EFA97267.1| ribosomal protein S4 [Prevotella timonensis CRIS 5C-B1]
          Length = 201

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G  L  KQK K 
Sbjct: 1   MARYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKMSEYGAMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LESRLD IV+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKADGITGEVLLQNLESRLDNIVFRLGIAPTRAAARQMVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G+ VNI SY  K G ++ V++K+K L  + E+          +I  +  +    F+
Sbjct: 119 IVVDGKVVNIPSYAVKPGQIVGVREKAKSLEVIEESLAGFNHSKYPWIEWDESSKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HQPERAD---IPENIKEQLIVELYSK 201


>gi|260779479|ref|ZP_05888369.1| SSU ribosomal protein S4p (S9e) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604288|gb|EEX30592.1| SSU ribosomal protein S4p (S9e) [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 206

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+KQ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDGGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206


>gi|127511116|ref|YP_001092313.1| 30S ribosomal protein S4 [Shewanella loihica PV-4]
 gi|152112260|sp|A3Q9A6|RS4_SHELP RecName: Full=30S ribosomal protein S4
 gi|126636411|gb|ABO22054.1| SSU ribosomal protein S4P [Shewanella loihica PV-4]
          Length = 206

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLTRREGTDLFLKSGVRAIDSKCKLEAAPGQHGA-RKARLSEYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL++ LE+RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRTYGVL-EKQFRNYYKDAARLKGNTGENLLTLLETRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DVI V++KS++ A +  A ++A +R+ P ++ V+   M
Sbjct: 119 SHKSIMVNGRVVNIPSFKVSANDVISVREKSQKQARIKAALEVASQREKPTWVEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206


>gi|51891251|ref|YP_073942.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863]
 gi|81692253|sp|Q67T95|RS4B_SYMTH RecName: Full=30S ribosomal protein S4 B
 gi|51854940|dbj|BAD39098.1| 30S ribosomal protein S4 [Symbiobacterium thermophilum IAM 14863]
          Length = 201

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    KHK+ RR+G  L G  K P   R Y PG HG  R  K S +G QL  KQK++ 
Sbjct: 1   MARYIGPKHKLCRRVGRPLCGSAKCPALKRPYRPGQHGPGRPQKLSEYGAQLLEKQKLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  F++A RSRG T   L+  LE RLDT+VYR  F  T+ AARQ V H H
Sbjct: 61  IYG-VMERQFRRYFEQAQRSRGVTGEVLLQLLEQRLDTVVYRLGFARTMAAARQLVGHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V +NGR V+I S + K GDV+ + QK++ LA V E+  L  R VP Y+S++   M +   
Sbjct: 120 VTLNGRRVDIASCQVKPGDVVGLTQKARSLAVVRESLDL-RRPVPPYLSLDETTMTSRLQ 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    PV +  +LVVE Y+R
Sbjct: 179 RLPLREE---IPVDVDESLVVELYAR 201


>gi|264680561|ref|YP_003280471.1| ribosomal protein S4 [Comamonas testosteroni CNB-2]
 gi|299532875|ref|ZP_07046262.1| 30S ribosomal protein S4 [Comamonas testosteroni S44]
 gi|262211077|gb|ACY35175.1| ribosomal protein S4 [Comamonas testosteroni CNB-2]
 gi|298719099|gb|EFI60069.1| 30S ribosomal protein S4 [Comamonas testosteroni S44]
          Length = 207

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 131/214 (61%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +T+   PG HG+    + S +GLQLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSIADKAKFDTK---PGQHGRTSGQRTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ ADR RG+T  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAADRKRGNTGANLLSLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172
           Q V+H+ + VNG+SVNI S+  KEGDV+ +++KSK+ A V+EA QL A+   P ++ V+ 
Sbjct: 117 QLVSHKAITVNGQSVNIPSFSVKEGDVVALREKSKKQARVVEALQLAAQVGFPAWVEVSA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D    TF + P   +   +   +  +L+VE YSR
Sbjct: 177 DKAEGTFKKSPDRDE---FAADINESLIVELYSR 207


>gi|218289979|ref|ZP_03494156.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1]
 gi|218239964|gb|EED07151.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1]
          Length = 208

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  V+ R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MARYTGPVCRLCRREGIKLYLKGERCFSEKCAVDKRPYAPGQHGQGRKRTTEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++YYG + E +F   ++EA R RG T   L+  LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQKARRYYGVL-ENQFERYYEEAARRRGVTGETLLQLLESRLDNVVYRLGFAASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+ VNGR V+I S+  KEGDV+ V++KS+  A + E ++L   R +P ++ ++ +
Sbjct: 119 LVRHGHIQVNGRRVDIPSFLVKEGDVVSVREKSRDNARLKELAELIPSRTIPAWLELDVE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N  A  +R P+  +       +Q   +VEFYSR
Sbjct: 179 NWTAKVLRRPARDE---IDAPVQEQQIVEFYSR 208


>gi|83748174|ref|ZP_00945201.1| SSU ribosomal protein S4P [Ralstonia solanacearum UW551]
 gi|207744551|ref|YP_002260943.1| 30s ribosomal protein s4 [Ralstonia solanacearum IPO1609]
 gi|83725142|gb|EAP72293.1| SSU ribosomal protein S4P [Ralstonia solanacearum UW551]
 gi|206595957|emb|CAQ62884.1| 30s ribosomal protein s4 [Ralstonia solanacearum IPO1609]
          Length = 207

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 128/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDV+ +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQIKSGDVVAIREKSKKQVRIAESLSLAEQSGFPTWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF + P     V     +  +L+VE YSR
Sbjct: 177 KKMEGTFKQAPDR---VDIAGDINESLIVELYSR 207


>gi|167564391|ref|ZP_02357307.1| 30S ribosomal protein S4 [Burkholderia oklahomensis EO147]
 gi|167571538|ref|ZP_02364412.1| 30S ribosomal protein S4 [Burkholderia oklahomensis C6786]
          Length = 207

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + +NG   N+ S + K GDVI +++K+K+ A ++EA  LAE+  +  +++V+ 
Sbjct: 117 QLVSHKAITLNGVVANVPSQQVKAGDVISIREKAKKQARIVEALSLAEQGGLASWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                TF ++P           +  +L+VE YSR
Sbjct: 177 KKFEGTFKQVPERAD---IAGDINESLIVELYSR 207


>gi|149376660|ref|ZP_01894419.1| ribosomal protein S4 [Marinobacter algicola DG893]
 gi|149359033|gb|EDM47498.1| ribosomal protein S4 [Marinobacter algicola DG893]
          Length = 206

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALDSKCNIETPPGMHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARIKGATGENLLQLLEGRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
           +H+ +LVN + VNI SY+ + GDV+ V++K+K    V  A  L+    P  ++ V+   M
Sbjct: 119 SHKAILVNDKLVNIPSYQVRPGDVVSVREKAKNQLRVKGALDLSSSRAPVSWVEVDASKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +  +P   +    P  +  NL+VE YS+
Sbjct: 179 SGVYRSVPERTE---LPADINENLIVELYSK 206


>gi|94500968|ref|ZP_01307493.1| ribosomal protein S4 [Oceanobacter sp. RED65]
 gi|94426908|gb|EAT11891.1| ribosomal protein S4 [Oceanobacter sp. RED65]
          Length = 206

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG+HG  R  + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALDSKCKVETKPGVHGAGR-GRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FRS +KEA R +G T  NL+  LE+RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRSYYKEAARVKGATGENLLKLLETRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY  K GDV+ +++K+K+   +  A +L A+R    +I V+   M
Sbjct: 119 SHKAIAVNGQTVNIPSYNIKAGDVVSIREKAKEQLRIKGALELAAQRGDIAWIDVDAKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P   +       +   L+VE YS+
Sbjct: 179 EGTFKAVPERSE---LSAEINEQLIVELYSK 206


>gi|222056680|ref|YP_002539042.1| ribosomal protein S4 [Geobacter sp. FRC-32]
 gi|254764590|sp|B9M6F3|RS4_GEOSF RecName: Full=30S ribosomal protein S4
 gi|221565969|gb|ACM21941.1| ribosomal protein S4 [Geobacter sp. FRC-32]
          Length = 208

 Score =  215 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K  +  R+Y PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYTGPSCRLCRRENTELFLKGERCYTDKCAIKRRNYPPGQHGQGRS-KTSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR  F+ ADR +G T  NL+  LE RLD IVYR  F  +   ARQ
Sbjct: 60  KQKVRRIYG-ILENQFRGYFERADRLKGVTGENLLFLLERRLDNIVYRLGFASSRIEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NG+ V I S + K GD +E+++KS+++AS+ E+ +    R +P+++ ++  
Sbjct: 119 LVRHGHFTLNGKKVTIPSIQVKTGDTVELREKSRKVASINESLEAVVRRGIPQWLELDKG 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +   +P   +D+  P  +Q  L+VE YS+
Sbjct: 179 AFKGSVKTLPVR-EDITMP--IQEQLIVELYSK 208


>gi|117918681|ref|YP_867873.1| 30S ribosomal protein S4 [Shewanella sp. ANA-3]
 gi|152112261|sp|A0KRP8|RS4_SHESA RecName: Full=30S ribosomal protein S4
 gi|117611013|gb|ABK46467.1| SSU ribosomal protein S4P [Shewanella sp. ANA-3]
          Length = 206

 Score =  215 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLESAPGQHGA-RKPRLSEYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ +++KS+  A +  A +  A+R+ P ++ V+   M
Sbjct: 119 SHKSIMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +   L+VE YS+
Sbjct: 179 EGAFKRIPERSD---LSAEINEQLIVELYSK 206


>gi|27468314|ref|NP_764951.1| 30S ribosomal protein S4 [Staphylococcus epidermidis ATCC 12228]
 gi|57867241|ref|YP_188856.1| 30S ribosomal protein S4 [Staphylococcus epidermidis RP62A]
 gi|251811109|ref|ZP_04825582.1| 30S ribosomal protein S4 [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875859|ref|ZP_06284726.1| ribosomal protein S4 [Staphylococcus epidermidis SK135]
 gi|293366334|ref|ZP_06613014.1| 30S ribosomal protein S4 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38258357|sp|Q8CS54|RS4_STAES RecName: Full=30S ribosomal protein S4
 gi|81674196|sp|Q5HNI5|RS4_STAEQ RecName: Full=30S ribosomal protein S4
 gi|27315860|gb|AAO04995.1|AE016748_229 30S ribosomal protein S4 [Staphylococcus epidermidis ATCC 12228]
 gi|57637899|gb|AAW54687.1| ribosomal protein S4 [Staphylococcus epidermidis RP62A]
 gi|251805329|gb|EES57986.1| 30S ribosomal protein S4 [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294884|gb|EFA87411.1| ribosomal protein S4 [Staphylococcus epidermidis SK135]
 gi|291319572|gb|EFE59938.1| 30S ribosomal protein S4 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329727885|gb|EGG64335.1| ribosomal protein S4 [Staphylococcus epidermidis VCU144]
 gi|329737374|gb|EGG73628.1| ribosomal protein S4 [Staphylococcus epidermidis VCU028]
 gi|329737515|gb|EGG73768.1| ribosomal protein S4 [Staphylococcus epidermidis VCU045]
          Length = 200

 Score =  215 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + DN+  TFV
Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLDIIKESVEI-NNFVPEYLDFDADNLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|152980403|ref|YP_001355076.1| 30S ribosomal protein S4 [Janthinobacterium sp. Marseille]
 gi|179308084|sp|A6T3H9|RS4_JANMA RecName: Full=30S ribosomal protein S4
 gi|151280480|gb|ABR88890.1| small subunit ribosomal protein S4 [Janthinobacterium sp.
           Marseille]
          Length = 207

 Score =  215 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +G QLR KQ
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG I E++FR  F EADR +G+T   L+  LE+RLD +VYR  F  T    RQ V
Sbjct: 61  KVKRMYG-ILERQFRRYFAEADRRKGNTGETLLKLLEARLDNVVYRMGFGSTRAEGRQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+   VNG  VNI SY+ K GDVI V++KSK+   ++EA  LAE+  +P ++SV+   M
Sbjct: 120 SHKAFTVNGIVVNIASYQVKPGDVIAVREKSKKQVRIVEALSLAEQSGMPSWVSVDAKKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+   P   +       +  +L+VE YSR
Sbjct: 180 EGTYKAAPDRSE---IANDVNESLIVELYSR 207


>gi|49079326|gb|AAT49880.1| PA4239 [synthetic construct]
          Length = 207

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HGQ R+ + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQ-RRGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++EA R +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQEASRRKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ K GDV+ V++KSK    + +A +L  +R   E++ V+ D  
Sbjct: 119 SHKAITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALELCGQRGRVEWVEVDLDKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P+          +  NL+VE YS+
Sbjct: 179 AGTFKSAPARSD---LSADINENLIVELYSK 206


>gi|229524553|ref|ZP_04413958.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae bv. albensis
           VL426]
 gi|229338134|gb|EEO03151.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae bv. albensis
           VL426]
          Length = 206

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S+     DV+ V++K+K+ + +  A ++AE R+ P +I V+ + M
Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPPWIEVDVNTM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206


>gi|261854973|ref|YP_003262256.1| ribosomal protein S4 [Halothiobacillus neapolitanus c2]
 gi|261835442|gb|ACX95209.1| ribosomal protein S4 [Halothiobacillus neapolitanus c2]
          Length = 207

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +        + +    PG HG  RK K S +G+QLR KQ
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGVRSHEDKCHHDRAPGQHGAARKQKVSEYGVQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F + FK+A + +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 61  KLRRIYGVL-ERQFANYFKKAAQLKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +HR + VNG  VNI SY+    DV+ V++ S++   + ++ ++ A+R    +ISV+   M
Sbjct: 120 SHRAITVNGEVVNIASYQVAANDVVAVRESSRKQQRIKDSLEIAAQRPDVSWISVDAAKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F   PS  +    P  +  +LVVE YS+
Sbjct: 180 EGVFKSAPSRDE---LPAEINESLVVELYSK 207


>gi|319764615|ref|YP_004128552.1| ribosomal protein s4 [Alicycliphilus denitrificans BC]
 gi|330826872|ref|YP_004390175.1| 30S ribosomal protein S4 [Alicycliphilus denitrificans K601]
 gi|317119176|gb|ADV01665.1| ribosomal protein S4 [Alicycliphilus denitrificans BC]
 gi|329312244|gb|AEB86659.1| ribosomal protein S4 [Alicycliphilus denitrificans K601]
          Length = 224

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 15/213 (7%)

Query: 2   SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           ++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S +GLQLR 
Sbjct: 19  ARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLRE 75

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR  F+ A+R +G+T  NL++ LESRLD +VYR  F  T   ARQ
Sbjct: 76  KQKVKRMYGVL-EKQFRRYFEAAERRKGNTGANLLALLESRLDNVVYRMGFGSTRAEARQ 134

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V+H+ + VNG+SVNI SY  K GDV+ V++KSK+ A ++EA QLA++  +P ++ VN D
Sbjct: 135 LVSHKAITVNGQSVNIASYLVKTGDVVAVREKSKKQARIVEALQLAQQVGMPAWVEVNAD 194

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  TF ++P   +   +   +  +L+VE YSR
Sbjct: 195 KVEGTFKQVPDRDQ---FGADINESLIVELYSR 224


>gi|28897055|ref|NP_796660.1| 30S ribosomal protein S4 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153840228|ref|ZP_01992895.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ3810]
 gi|156973074|ref|YP_001443981.1| 30S ribosomal protein S4 [Vibrio harveyi ATCC BAA-1116]
 gi|260877973|ref|ZP_05890328.1| ribosomal protein S4 [Vibrio parahaemolyticus AN-5034]
 gi|260895673|ref|ZP_05904169.1| ribosomal protein S4 [Vibrio parahaemolyticus Peru-466]
 gi|260903551|ref|ZP_05911946.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ4037]
 gi|262392492|ref|YP_003284346.1| 30S ribosomal protein S4p [Vibrio sp. Ex25]
 gi|269964713|ref|ZP_06178951.1| 30S ribosomal protein S4 [Vibrio alginolyticus 40B]
 gi|31340377|sp|Q87SZ1|RS4_VIBPA RecName: Full=30S ribosomal protein S4
 gi|171769916|sp|A7N0H7|RS4_VIBHB RecName: Full=30S ribosomal protein S4
 gi|28805263|dbj|BAC58544.1| ribosomal protein S4 [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746105|gb|EDM57235.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ3810]
 gi|156524668|gb|ABU69754.1| hypothetical protein VIBHAR_00753 [Vibrio harveyi ATCC BAA-1116]
 gi|262336086|gb|ACY49881.1| SSU ribosomal protein S4p (S9e) [Vibrio sp. Ex25]
 gi|269830612|gb|EEZ84833.1| 30S ribosomal protein S4 [Vibrio alginolyticus 40B]
 gi|308089501|gb|EFO39196.1| ribosomal protein S4 [Vibrio parahaemolyticus Peru-466]
 gi|308090096|gb|EFO39791.1| ribosomal protein S4 [Vibrio parahaemolyticus AN-5034]
 gi|308109051|gb|EFO46591.1| ribosomal protein S4 [Vibrio parahaemolyticus AQ4037]
 gi|328471858|gb|EGF42735.1| 30S ribosomal protein S4 [Vibrio parahaemolyticus 10329]
          Length = 206

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+KQ A +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVAEQREKPTWIEVDGGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206


>gi|326334520|ref|ZP_08200731.1| 30S ribosomal protein S4 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693289|gb|EGD35217.1| 30S ribosomal protein S4 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 201

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 125/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    ++Y PG HG  R+++K S + +QL+ KQK K
Sbjct: 1   MARYIGPKSKIARKFGEAIFGEDKS-FAKKNYPPGQHGINRKRAKRSEYAIQLQEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++F++++++A RS+G T   L+   E+RLD +VYR    P+  AARQ V+HR
Sbjct: 60  YTYG-ILERQFQNMYEKARRSKGVTGEVLLQLCEARLDNVVYRMGIAPSRRAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GD++ V+ KS+ L  +  A   +   V E+I+ N + M  TF
Sbjct: 119 HITVNGEVVNIPSYSLKAGDIVGVRHKSQSLTVIENALA-SNSSVYEWITWNPEKMEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     +  P  ++  L+VE YS+
Sbjct: 178 VALPQR---IQIPENIKEQLIVELYSK 201


>gi|228941836|ref|ZP_04104383.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228960923|ref|ZP_04122556.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228974761|ref|ZP_04135327.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981356|ref|ZP_04141656.1| 30S ribosomal protein S4 [Bacillus thuringiensis Bt407]
 gi|229048362|ref|ZP_04193930.1| 30S ribosomal protein S4 [Bacillus cereus AH676]
 gi|229087217|ref|ZP_04219364.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-44]
 gi|229112121|ref|ZP_04241664.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-15]
 gi|229147216|ref|ZP_04275574.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST24]
 gi|228636326|gb|EEK92798.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST24]
 gi|228671444|gb|EEL26745.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-15]
 gi|228696098|gb|EEL48936.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-44]
 gi|228723087|gb|EEL74464.1| 30S ribosomal protein S4 [Bacillus cereus AH676]
 gi|228778556|gb|EEM26823.1| 30S ribosomal protein S4 [Bacillus thuringiensis Bt407]
 gi|228785164|gb|EEM33177.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228798819|gb|EEM45799.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228818048|gb|EEM64126.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942441|gb|AEA18337.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 200

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200


>gi|255067434|ref|ZP_05319289.1| ribosomal protein S4 [Neisseria sicca ATCC 29256]
 gi|261364879|ref|ZP_05977762.1| ribosomal protein S4 [Neisseria mucosa ATCC 25996]
 gi|255048229|gb|EET43693.1| ribosomal protein S4 [Neisseria sicca ATCC 29256]
 gi|288566927|gb|EFC88487.1| ribosomal protein S4 [Neisseria mucosa ATCC 25996]
          Length = 206

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKLDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P ++SV+ D +
Sbjct: 119 SHKAITVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206


>gi|289579115|ref|YP_003477742.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9]
 gi|297545302|ref|YP_003677604.1| ribosomal protein S4 [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|289528828|gb|ADD03180.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9]
 gi|296843077|gb|ADH61593.1| ribosomal protein S4 [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 206

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +       K PV  R Y PG HGQ RK   SY G+QLR 
Sbjct: 1   MGRYLGPSCRLCRREGMKLYLKGDKCYTDKCPVVRRGYAPGQHGQERKKLTSY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+YYG + E++F   +++A+R +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKLKRYYG-LLERQFERFYEKAERMKGITGENLLQLLERRLDNVVYRLGFAVSRRQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V+H H+ VNG+ V+I S+  K GDVI V++KS+ +  +    + A R+VP+++ +N D 
Sbjct: 119 LVSHGHIEVNGKKVDIPSFLVKPGDVISVREKSRSMELIKNNLEAA-RNVPDWLELNKDA 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V +P   + +  P  +Q +L+VE YS+
Sbjct: 178 FEGRVVSLP-RREHIDLP--IQEHLIVELYSK 206


>gi|224023644|ref|ZP_03642010.1| hypothetical protein BACCOPRO_00351 [Bacteroides coprophilus DSM
           18228]
 gi|224016866|gb|EEF74878.1| hypothetical protein BACCOPRO_00351 [Bacteroides coprophilus DSM
           18228]
          Length = 201

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNNRRKKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  + G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAASANGITGEILLQSLECRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G ++ V+++SK L  +  A          ++  + ++     +
Sbjct: 119 ITVDGKVVNIPSYSVKPGQLVGVRERSKSLEVIGSALAGFNHSKYPWLEWDENSKTGKML 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|21230387|ref|NP_636304.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|21241760|ref|NP_641342.1| 30S ribosomal protein S4 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|66769619|ref|YP_244381.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|78046578|ref|YP_362753.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|188992831|ref|YP_001904841.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris
           str. B100]
 gi|294627861|ref|ZP_06706440.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294664166|ref|ZP_06729552.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325916510|ref|ZP_08178779.1| SSU ribosomal protein S4P [Xanthomonas vesicatoria ATCC 35937]
 gi|325921504|ref|ZP_08183359.1| SSU ribosomal protein S4P [Xanthomonas gardneri ATCC 19865]
 gi|325925364|ref|ZP_08186766.1| SSU ribosomal protein S4P [Xanthomonas perforans 91-118]
 gi|59800213|sp|P0A0X9|RS4_XANCP RecName: Full=30S ribosomal protein S4
 gi|59800214|sp|P0A0Y0|RS4_XANAC RecName: Full=30S ribosomal protein S4
 gi|81304426|sp|Q4URG2|RS4_XANC8 RecName: Full=30S ribosomal protein S4
 gi|90101736|sp|Q3BWW0|RS4_XANC5 RecName: Full=30S ribosomal protein S4
 gi|226695102|sp|B0RU59|RS4_XANCB RecName: Full=30S ribosomal protein S4
 gi|4098576|gb|AAD00324.1| ribosomal protein S4 [Xanthomonas campestris pv. campestris]
 gi|21107132|gb|AAM35878.1| 30S ribosomal protein S4 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21111944|gb|AAM40228.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574951|gb|AAY50361.1| 30S ribosomal protein s4 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|78035008|emb|CAJ22653.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|167734591|emb|CAP52801.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. campestris]
 gi|292597775|gb|EFF41933.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606069|gb|EFF49334.1| 30S ribosomal protein S4 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325537299|gb|EGD09026.1| SSU ribosomal protein S4P [Xanthomonas vesicatoria ATCC 35937]
 gi|325544242|gb|EGD15623.1| SSU ribosomal protein S4P [Xanthomonas perforans 91-118]
 gi|325548051|gb|EGD19050.1| SSU ribosomal protein S4P [Xanthomonas gardneri ATCC 19865]
          Length = 208

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  +   PG HG  RK K S +  QLR
Sbjct: 1   MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGAARKGKLSDYATQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K+A   +G+T  NL+  LE+RLD + YR  F  T  AAR
Sbjct: 58  EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVCYRMGFAVTRPAAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171
           Q V+HR VLVNG+SVN+ SY+ K GD I + +K+++   V EA  +AE+    P ++ V+
Sbjct: 117 QLVSHRGVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEALTVAEQHDMTPSWVEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  F  +P        P  +   L+VE YS+
Sbjct: 177 SKKFSGVFKAVPDRAD---LPSDINEALIVELYSK 208


>gi|295694865|ref|YP_003588103.1| ribosomal protein S4 [Bacillus tusciae DSM 2912]
 gi|295410467|gb|ADG04959.1| ribosomal protein S4 [Bacillus tusciae DSM 2912]
          Length = 208

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  ++ R Y PG HGQ R+ +  Y G+QLR 
Sbjct: 1   MARYTGPVCRLCRREGVKLYLKGERCYSDKCAIDRRGYAPGQHGQGRRKQSEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR  ++EA+R  G T   L+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKARRTYGVL-EKQFRHYYEEANRQHGVTGEVLLQLLERRLDNVVYRLGYAASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNGR V+I SY+ KEGDV+ V++KS +   + E  + A+ R VP ++  +  
Sbjct: 119 LVRHGHFTVNGRRVDIPSYQLKEGDVVAVREKSLESPRLKELVETADSRTVPAWLDRDSA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 +RIP+  +       +Q  ++VE YSR
Sbjct: 179 TASGKVLRIPTRDE---IDTPVQEQMIVELYSR 208


>gi|262370554|ref|ZP_06063879.1| ribosomal protein S4 [Acinetobacter johnsonii SH046]
 gi|262314354|gb|EEY95396.1| ribosomal protein S4 [Acinetobacter johnsonii SH046]
          Length = 208

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HG  R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKAAKAPGQHGGARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P ++ ++H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAVELAAQRGIPSWMEIDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208


>gi|157960037|ref|YP_001500071.1| 30S ribosomal protein S4 [Shewanella pealeana ATCC 700345]
 gi|167626016|ref|YP_001676310.1| 30S ribosomal protein S4 [Shewanella halifaxensis HAW-EB4]
 gi|212634853|ref|YP_002311378.1| 30S ribosomal protein S4 [Shewanella piezotolerans WP3]
 gi|189045398|sp|B0TLY9|RS4_SHEHH RecName: Full=30S ribosomal protein S4
 gi|189045399|sp|A8GYZ9|RS4_SHEPA RecName: Full=30S ribosomal protein S4
 gi|226695075|sp|B8CNF7|RS4_SHEPW RecName: Full=30S ribosomal protein S4
 gi|157845037|gb|ABV85536.1| ribosomal protein S4 [Shewanella pealeana ATCC 700345]
 gi|167356038|gb|ABZ78651.1| ribosomal protein S4 [Shewanella halifaxensis HAW-EB4]
 gi|212556337|gb|ACJ28791.1| Ribosomal protein S4 [Shewanella piezotolerans WP3]
          Length = 206

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R++G+T  NL++ LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARTKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ ++VNG  VNI S++    DV+ V++KS+  A +  A +  A+R+ P ++ V++  M
Sbjct: 119 SHKSIMVNGSVVNIPSFKVSANDVVSVREKSRTQARIKAALEVSAQREKPTWVEVDNTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +   L+VE YS+
Sbjct: 179 EGAFKRIPERSD---LSAEINEQLIVELYSK 206


>gi|288925689|ref|ZP_06419621.1| ribosomal protein S4 [Prevotella buccae D17]
 gi|315606478|ref|ZP_07881493.1| 30S ribosomal protein S4 [Prevotella buccae ATCC 33574]
 gi|288337627|gb|EFC75981.1| ribosomal protein S4 [Prevotella buccae D17]
 gi|315251884|gb|EFU31858.1| 30S ribosomal protein S4 [Prevotella buccae ATCC 33574]
          Length = 201

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MAKYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRRKVSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F +A ++ G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFDKAAKADGITGEVLLQNLECRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G+ V+I SY  K G V+ V++K+K L  +  A          ++  + +     F+
Sbjct: 119 IVVDGKVVSIPSYSVKAGQVVGVREKAKSLEVIEAALAGFNHSKYPWLEWDQNTKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|319639573|ref|ZP_07994320.1| 30S ribosomal protein S4 [Neisseria mucosa C102]
 gi|317399144|gb|EFV79818.1| 30S ribosomal protein S4 [Neisseria mucosa C102]
          Length = 206

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKMDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P ++SV+ D +
Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LSGDINEQLVVEFYSK 206


>gi|330997339|ref|ZP_08321190.1| ribosomal protein S4 [Paraprevotella xylaniphila YIT 11841]
 gi|329570713|gb|EGG52429.1| ribosomal protein S4 [Paraprevotella xylaniphila YIT 11841]
          Length = 201

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYTGPKSRIARRFGEAIFGPDK-VLSKRNFPPGQHGNNRRKKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A R+ G T   L+  LE RLD +VYR    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNMFEKAARTSGITGEILLQNLECRLDNVVYRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SY  K G +I V++KSK L  +  A          +I  + +      +
Sbjct: 119 IIVDGEVVNIPSYAVKPGQIIGVREKSKSLEVIANALAGFNHSKYPWIEWDENTKSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|90416840|ref|ZP_01224769.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2207]
 gi|90331187|gb|EAS46431.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2207]
          Length = 206

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +    P+ ++      PG HGQ R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPTCKLSRREGTDLFLKSGVRPLESKCRADSAPGQHGQ-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +++A R +G+T  NL++ LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYRDAARQKGNTGENLLTLLERRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
            H  ++VNG+ VNI S++ +EGDV+ +++KSK+   V  A QL A+R   E+++V+   M
Sbjct: 119 AHNSIVVNGQKVNIPSFKVQEGDVVGLREKSKKQLRVQTALQLAAQRGEVEWMNVDSSKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P        P  +  NL+VE YS+
Sbjct: 179 EGTFTRNPDRSD---LPAEINENLIVELYSK 206


>gi|228910481|ref|ZP_04074296.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 200]
 gi|228849247|gb|EEM94086.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 200]
          Length = 200

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVIVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERSE---LPAEINEALIVEFYSR 200


>gi|317129954|ref|YP_004096236.1| ribosomal protein S4 [Bacillus cellulosilyticus DSM 2522]
 gi|315474902|gb|ADU31505.1| ribosomal protein S4 [Bacillus cellulosilyticus DSM 2522]
          Length = 200

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R YGPG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LQKRPYGPGEHGPNQRKKMSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR +F +A + +G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  MYG-MNERQFRKLFDQAGKIQGIHGENFMILLESRLDNLVYRLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V V+G  V+I SYR K G VI +++KS+ L +V  A ++ +  VP Y+  N D +  TF 
Sbjct: 119 VTVDGGRVDIASYRVKPGQVIGLREKSRNLDAVKNAVEVNDF-VPAYLDFNADALEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VEFYSR
Sbjct: 178 RLPERSE---LPAEITEQLIVEFYSR 200


>gi|121997625|ref|YP_001002412.1| ribosomal protein S4 [Halorhodospira halophila SL1]
 gi|152060952|sp|A1WV98|RS4_HALHL RecName: Full=30S ribosomal protein S4
 gi|121589030|gb|ABM61610.1| SSU ribosomal protein S4P [Halorhodospira halophila SL1]
          Length = 207

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR   +L+ +     ++T+      PG HGQRR  + S +GLQLR KQ
Sbjct: 1   MAKYIGPKCKLARREKTDLFLKSGVRSIDTKCKLEQPPGQHGQRRGGRMSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ +KEA R +  T   L+  LESRLD + YR  F  T   ARQ V
Sbjct: 61  KVRRMYG-IMERQFRNYYKEAARRKAATGTALLQLLESRLDNVCYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175
           NHR VLVNGR VNI SY+ + GD + VK+K+K    +  A +LA+++    ++ V+   M
Sbjct: 120 NHRGVLVNGRVVNIPSYQVQPGDTVSVKEKAKSQLRIQAALELAQQNGWASWVDVDATKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F + P           +  +L+VE YS+
Sbjct: 180 EGVFKQAPDRAD---LSQEINESLIVELYSK 207


>gi|261250393|ref|ZP_05942968.1| SSU ribosomal protein S4p (S9e) [Vibrio orientalis CIP 102891]
 gi|260938962|gb|EEX94949.1| SSU ribosomal protein S4p (S9e) [Vibrio orientalis CIP 102891]
          Length = 206

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VNI S++    DV+ +++K+KQ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKAILVNGKVVNIPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ATF R+P           +   L+VE YS+
Sbjct: 179 EATFKRMPERSD---LSADINEQLIVELYSK 206


>gi|7440168|pir||JE0399 ribosomal protein S4 - Thermus aquaticus (strain HB8)
          Length = 209

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +      PK  +  R Y PG HGQ+R  +PS + ++LR 
Sbjct: 1   MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG ISE++FR++F+EA + +G T    +  LESRLD +VYR  F  +   ARQ
Sbjct: 61  KQKLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+ VNGR V++ SYR + GD I V +KS+ L  + +  + +  R V  ++S+  +
Sbjct: 120 LVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLEVE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F+R+P   +D+  PV     LV+EFYSR
Sbjct: 180 GMKGKFLRLPDR-EDLALPV--NEQLVIEFYSR 209


>gi|319952171|ref|YP_004163438.1| ssu ribosomal protein s4p [Cellulophaga algicola DSM 14237]
 gi|319420831|gb|ADV47940.1| SSU ribosomal protein S4P [Cellulophaga algicola DSM 14237]
          Length = 201

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R++ PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYIGPKTKIARKFGEAIFGDDKS-FEKRNFPPGQHGNARRRGKKSEYAVQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR+IF  A R  G T   L+   E RLD +V+R     +   ARQ V+HR
Sbjct: 60  YTYG-ILEKQFRNIFASAKRKEGVTGEILLQLCECRLDNVVFRMGVSNSRSGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK ++++ +A   +   V E+++ N + M  TF
Sbjct: 119 HITVNGELVNIPSYSLKSGDVVGVREKSKSISTIQDALA-SNSSVYEWMTWNTEKMEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P  L+    P  ++  L+VE YS+
Sbjct: 178 VAVPERLQ---IPENIKEQLIVELYSK 201


>gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 [Neisseria flavescens SK114]
 gi|241320027|gb|EER56408.1| ribosomal protein S4 [Neisseria flavescens SK114]
          Length = 206

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKMDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P ++SV+ D +
Sbjct: 119 SHKAIIVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LSGDINEQLVVEFYSK 206


>gi|189219451|ref|YP_001940092.1| Ribosomal protein S4 [Methylacidiphilum infernorum V4]
 gi|189186309|gb|ACD83494.1| Ribosomal protein S4 [Methylacidiphilum infernorum V4]
          Length = 228

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    K KI RR    L+G P   +  + Y PG+HGQR   K S + + L  KQK++ 
Sbjct: 27  MAKYIGPKTKISRRFNVALFG-PNKALERKPYPPGIHGQRAGKKKSDYAIALGEKQKLRF 85

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E++F   F  A + +G T   L+  LE RLD +VYR  F  +   ARQ VNH H
Sbjct: 86  MYG-ITERQFSRYFNIAHKKKGVTGEVLLQILEERLDNVVYRLCFATSRMEARQLVNHGH 144

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VNG+ VNI SYR K GDVIEV  K +     L   +  +   +P+++++  DN+    
Sbjct: 145 IYVNGKKVNIPSYRTKPGDVIEVCPKPQSRKLALRNLEAMKGVKIPDWLALEPDNLKGVV 204

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P+  +  P    +   LVVEFYS+
Sbjct: 205 KRVPTRDEIQPI---VNEQLVVEFYSK 228


>gi|30022730|ref|NP_834361.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 14579]
 gi|206969984|ref|ZP_03230938.1| 30S ribosomal protein S4 [Bacillus cereus AH1134]
 gi|218235372|ref|YP_002369450.1| 30S ribosomal protein S4 [Bacillus cereus B4264]
 gi|228923404|ref|ZP_04086692.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954925|ref|ZP_04116943.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072158|ref|ZP_04205367.1| 30S ribosomal protein S4 [Bacillus cereus F65185]
 gi|229081908|ref|ZP_04214400.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-2]
 gi|229129939|ref|ZP_04258905.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-Cer4]
 gi|229152850|ref|ZP_04281033.1| 30S ribosomal protein S4 [Bacillus cereus m1550]
 gi|229180974|ref|ZP_04308309.1| 30S ribosomal protein S4 [Bacillus cereus 172560W]
 gi|229192859|ref|ZP_04319817.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 10876]
 gi|296505124|ref|YP_003666824.1| 30S ribosomal protein S4 [Bacillus thuringiensis BMB171]
 gi|38372409|sp|Q817A4|RS4_BACCR RecName: Full=30S ribosomal protein S4
 gi|226697802|sp|B7H711|RS4_BACC4 RecName: Full=30S ribosomal protein S4
 gi|29898289|gb|AAP11562.1| SSU ribosomal protein S4P [Bacillus cereus ATCC 14579]
 gi|206735672|gb|EDZ52840.1| 30S ribosomal protein S4 [Bacillus cereus AH1134]
 gi|218163329|gb|ACK63321.1| ribosomal protein S4 [Bacillus cereus B4264]
 gi|228590698|gb|EEK48559.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 10876]
 gi|228602531|gb|EEK60017.1| 30S ribosomal protein S4 [Bacillus cereus 172560W]
 gi|228630670|gb|EEK87316.1| 30S ribosomal protein S4 [Bacillus cereus m1550]
 gi|228653630|gb|EEL09502.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-Cer4]
 gi|228701496|gb|EEL53990.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-2]
 gi|228711092|gb|EEL63058.1| 30S ribosomal protein S4 [Bacillus cereus F65185]
 gi|228804746|gb|EEM51347.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836358|gb|EEM81711.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326176|gb|ADH09104.1| 30S ribosomal protein S4 [Bacillus thuringiensis BMB171]
          Length = 200

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERSE---LPAEINEALIVEFYSR 200


>gi|70726207|ref|YP_253121.1| 30S ribosomal protein S4 [Staphylococcus haemolyticus JCSC1435]
 gi|82581621|sp|Q4L760|RS4_STAHJ RecName: Full=30S ribosomal protein S4
 gi|68446931|dbj|BAE04515.1| 30S ribosomal protein S4 [Staphylococcus haemolyticus JCSC1435]
          Length = 200

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ V H H
Sbjct: 60  LYG-MTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVGHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V V+GR V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + D++  TFV
Sbjct: 119 VEVDGRRVDIPSYSLKPGQVITVREKSQNLDIIKESVEI-NNFVPEYLDFDADSLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|312884679|ref|ZP_07744380.1| 30S ribosomal protein S4 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367592|gb|EFP95143.1| 30S ribosomal protein S4 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 206

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+F + +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFHNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+KQ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDGSKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ATF R+P           +   L+VE YS+
Sbjct: 179 EATFKRLPERSD---LSADINEQLIVELYSK 206


>gi|15642567|ref|NP_232200.1| 30S ribosomal protein S4 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147675276|ref|YP_001218066.1| 30S ribosomal protein S4 [Vibrio cholerae O395]
 gi|153820465|ref|ZP_01973132.1| ribosomal protein S4 [Vibrio cholerae NCTC 8457]
 gi|227082689|ref|YP_002811240.1| ribosomal protein S4 [Vibrio cholerae M66-2]
 gi|229507376|ref|ZP_04396881.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae BX 330286]
 gi|229509700|ref|ZP_04399181.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae B33]
 gi|229513495|ref|ZP_04402959.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TMA 21]
 gi|229516825|ref|ZP_04406271.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae RC9]
 gi|229521638|ref|ZP_04411056.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TM 11079-80]
 gi|229527498|ref|ZP_04416890.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae 12129(1)]
 gi|229606882|ref|YP_002877530.1| 30S ribosomal protein S4 [Vibrio cholerae MJ-1236]
 gi|254292241|ref|ZP_04963004.1| ribosomal protein S4 [Vibrio cholerae AM-19226]
 gi|254851112|ref|ZP_05240462.1| ribosomal protein S4 [Vibrio cholerae MO10]
 gi|255744459|ref|ZP_05418411.1| SSU ribosomal protein S4p (S9e) [Vibrio cholera CIRS 101]
 gi|297581414|ref|ZP_06943337.1| ribosomal protein S4 [Vibrio cholerae RC385]
 gi|26399513|sp|Q9KP07|RS4_VIBCH RecName: Full=30S ribosomal protein S4
 gi|172047566|sp|A5F573|RS4_VIBC3 RecName: Full=30S ribosomal protein S4
 gi|254764621|sp|C3LRN4|RS4_VIBCM RecName: Full=30S ribosomal protein S4
 gi|9657158|gb|AAF95713.1| ribosomal protein S4 [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|126508992|gb|EAZ71586.1| ribosomal protein S4 [Vibrio cholerae NCTC 8457]
 gi|146317159|gb|ABQ21698.1| ribosomal protein S4 [Vibrio cholerae O395]
 gi|150421843|gb|EDN13827.1| ribosomal protein S4 [Vibrio cholerae AM-19226]
 gi|227010577|gb|ACP06789.1| ribosomal protein S4 [Vibrio cholerae M66-2]
 gi|227014461|gb|ACP10671.1| ribosomal protein S4 [Vibrio cholerae O395]
 gi|229335130|gb|EEO00615.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae 12129(1)]
 gi|229341232|gb|EEO06236.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TM 11079-80]
 gi|229345888|gb|EEO10860.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae RC9]
 gi|229349372|gb|EEO14328.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae TMA 21]
 gi|229353174|gb|EEO18113.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae B33]
 gi|229354881|gb|EEO19802.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae BX 330286]
 gi|229369537|gb|ACQ59960.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae MJ-1236]
 gi|254846817|gb|EET25231.1| ribosomal protein S4 [Vibrio cholerae MO10]
 gi|255737984|gb|EET93377.1| SSU ribosomal protein S4p (S9e) [Vibrio cholera CIRS 101]
 gi|297534252|gb|EFH73090.1| ribosomal protein S4 [Vibrio cholerae RC385]
 gi|327485054|gb|AEA79461.1| SSU ribosomal protein S4p (S9e) [Vibrio cholerae LMA3894-4]
          Length = 206

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S+     DV+ V++K+K+ + +  A ++AE R+ P +I V+ + M
Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPTWIEVDVNTM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206


>gi|15924709|ref|NP_372243.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927296|ref|NP_374829.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus N315]
 gi|21283391|ref|NP_646479.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MW2]
 gi|49486544|ref|YP_043765.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652018|ref|YP_186603.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus COL]
 gi|82751307|ref|YP_417048.1| 30S ribosomal protein S4 [Staphylococcus aureus RF122]
 gi|87159914|ref|YP_494360.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195529|ref|YP_500334.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268198|ref|YP_001247141.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus JH9]
 gi|150394266|ref|YP_001316941.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus JH1]
 gi|151221825|ref|YP_001332647.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980036|ref|YP_001442295.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509934|ref|YP_001575593.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253315106|ref|ZP_04838319.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732369|ref|ZP_04866534.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255006504|ref|ZP_05145105.2| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794103|ref|ZP_05643082.1| 30S ribosomal protein S4 [Staphylococcus aureus A9781]
 gi|258415807|ref|ZP_05682078.1| 30S ribosomal protein S4 [Staphylococcus aureus A9763]
 gi|258424134|ref|ZP_05687016.1| SSU ribosomal protein S4 [Staphylococcus aureus A9635]
 gi|258438286|ref|ZP_05689570.1| ribosomal protein S4 [Staphylococcus aureus A9299]
 gi|258443744|ref|ZP_05692083.1| ribosomal protein S4 [Staphylococcus aureus A8115]
 gi|258445955|ref|ZP_05694131.1| 30S ribosomal protein S4 [Staphylococcus aureus A6300]
 gi|258448365|ref|ZP_05696482.1| ribosomal protein S4 [Staphylococcus aureus A6224]
 gi|258450886|ref|ZP_05698939.1| 30S ribosomal protein S4 [Staphylococcus aureus A5948]
 gi|258454155|ref|ZP_05702126.1| SSU ribosomal protein S4P [Staphylococcus aureus A5937]
 gi|262049033|ref|ZP_06021911.1| 30S ribosomal protein S4 [Staphylococcus aureus D30]
 gi|262051784|ref|ZP_06024001.1| 30S ribosomal protein S4 [Staphylococcus aureus 930918-3]
 gi|269203358|ref|YP_003282627.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ED98]
 gi|282893214|ref|ZP_06301448.1| 30S ribosomal protein S4 [Staphylococcus aureus A8117]
 gi|282916980|ref|ZP_06324738.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus D139]
 gi|282924410|ref|ZP_06332083.1| 30S ribosomal protein S4 [Staphylococcus aureus A9765]
 gi|282927849|ref|ZP_06335460.1| 30S ribosomal protein S4 [Staphylococcus aureus A10102]
 gi|283770798|ref|ZP_06343690.1| small subunit ribosomal protein S4 [Staphylococcus aureus subsp.
           aureus H19]
 gi|284024766|ref|ZP_06379164.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus 132]
 gi|294849881|ref|ZP_06790620.1| 30S ribosomal protein S4 [Staphylococcus aureus A9754]
 gi|295406030|ref|ZP_06815838.1| 30S ribosomal protein S4 [Staphylococcus aureus A8819]
 gi|296276442|ref|ZP_06858949.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MR1]
 gi|297207568|ref|ZP_06924003.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245044|ref|ZP_06928921.1| 30S ribosomal protein S4 [Staphylococcus aureus A8796]
 gi|300911649|ref|ZP_07129093.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304380688|ref|ZP_07363359.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039510|sp|P66563|RS4_STAAN RecName: Full=30S ribosomal protein S4
 gi|54039511|sp|P66564|RS4_STAAW RecName: Full=30S ribosomal protein S4
 gi|54041963|sp|P66562|RS4_STAAM RecName: Full=30S ribosomal protein S4
 gi|56749380|sp|Q6G8K8|RS4_STAAS RecName: Full=30S ribosomal protein S4
 gi|62287184|sp|Q5HF54|RS4_STAAC RecName: Full=30S ribosomal protein S4
 gi|90101727|sp|Q2YTH0|RS4_STAAB RecName: Full=30S ribosomal protein S4
 gi|122539301|sp|Q2FXK6|RS4_STAA8 RecName: Full=30S ribosomal protein S4
 gi|123485448|sp|Q2FG18|RS4_STAA3 RecName: Full=30S ribosomal protein S4
 gi|171769945|sp|A7X3F0|RS4_STAA1 RecName: Full=30S ribosomal protein S4
 gi|172048947|sp|A6QHQ3|RS4_STAAE RecName: Full=30S ribosomal protein S4
 gi|189045401|sp|A6U2I6|RS4_STAA2 RecName: Full=30S ribosomal protein S4
 gi|189045402|sp|A5ITP2|RS4_STAA9 RecName: Full=30S ribosomal protein S4
 gi|189045403|sp|A8Z2N6|RS4_STAAT RecName: Full=30S ribosomal protein S4
 gi|13701514|dbj|BAB42808.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus N315]
 gi|14247491|dbj|BAB57881.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204831|dbj|BAB95527.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MW2]
 gi|49244987|emb|CAG43448.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286204|gb|AAW38298.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus COL]
 gi|82656838|emb|CAI81267.1| 30S ribosomal protein S4 [Staphylococcus aureus RF122]
 gi|87125888|gb|ABD20402.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203087|gb|ABD30897.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741267|gb|ABQ49565.1| SSU ribosomal protein S4P [Staphylococcus aureus subsp. aureus JH9]
 gi|149946718|gb|ABR52654.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus JH1]
 gi|150374625|dbj|BAF67885.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722171|dbj|BAF78588.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368743|gb|ABX29714.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723891|gb|EES92620.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788075|gb|EEV26415.1| 30S ribosomal protein S4 [Staphylococcus aureus A9781]
 gi|257839400|gb|EEV63873.1| 30S ribosomal protein S4 [Staphylococcus aureus A9763]
 gi|257845755|gb|EEV69787.1| SSU ribosomal protein S4 [Staphylococcus aureus A9635]
 gi|257848330|gb|EEV72321.1| ribosomal protein S4 [Staphylococcus aureus A9299]
 gi|257851150|gb|EEV75093.1| ribosomal protein S4 [Staphylococcus aureus A8115]
 gi|257855197|gb|EEV78136.1| 30S ribosomal protein S4 [Staphylococcus aureus A6300]
 gi|257858333|gb|EEV81218.1| ribosomal protein S4 [Staphylococcus aureus A6224]
 gi|257861422|gb|EEV84230.1| 30S ribosomal protein S4 [Staphylococcus aureus A5948]
 gi|257863607|gb|EEV86364.1| SSU ribosomal protein S4P [Staphylococcus aureus A5937]
 gi|259160278|gb|EEW45305.1| 30S ribosomal protein S4 [Staphylococcus aureus 930918-3]
 gi|259162850|gb|EEW47414.1| 30S ribosomal protein S4 [Staphylococcus aureus D30]
 gi|262075648|gb|ACY11621.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ED98]
 gi|269941198|emb|CBI49586.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus TW20]
 gi|282319467|gb|EFB49819.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus D139]
 gi|282590359|gb|EFB95438.1| 30S ribosomal protein S4 [Staphylococcus aureus A10102]
 gi|282592911|gb|EFB97914.1| 30S ribosomal protein S4 [Staphylococcus aureus A9765]
 gi|282764532|gb|EFC04658.1| 30S ribosomal protein S4 [Staphylococcus aureus A8117]
 gi|283460945|gb|EFC08035.1| small subunit ribosomal protein S4 [Staphylococcus aureus subsp.
           aureus H19]
 gi|283470985|emb|CAQ50196.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus ST398]
 gi|285817402|gb|ADC37889.1| 30S ribosomal protein S4 [Staphylococcus aureus 04-02981]
 gi|294823220|gb|EFG39650.1| 30S ribosomal protein S4 [Staphylococcus aureus A9754]
 gi|294969027|gb|EFG45048.1| 30S ribosomal protein S4 [Staphylococcus aureus A8819]
 gi|296887585|gb|EFH26483.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178124|gb|EFH37372.1| 30S ribosomal protein S4 [Staphylococcus aureus A8796]
 gi|298694988|gb|ADI98210.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887070|gb|EFK82271.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333384|gb|ADL23577.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|304340795|gb|EFM06724.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830098|emb|CBX34940.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130645|gb|EFT86631.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315197186|gb|EFU27525.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141663|gb|EFW33498.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320143817|gb|EFW35590.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323440736|gb|EGA98445.1| 30S ribosomal protein S4 [Staphylococcus aureus O11]
 gi|323442976|gb|EGB00598.1| 30S ribosomal protein S4 [Staphylococcus aureus O46]
 gi|329314393|gb|AEB88806.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329726987|gb|EGG63444.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus 21189]
 gi|329727555|gb|EGG64011.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus 21172]
 gi|329733129|gb|EGG69466.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus 21193]
          Length = 200

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K G  I V++KS++L  ++E+ ++    VPEY++ + D++  TFV
Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200


>gi|90020630|ref|YP_526457.1| 30S ribosomal protein S4P [Saccharophagus degradans 2-40]
 gi|123277582|sp|Q21M34|RS4_SACD2 RecName: Full=30S ribosomal protein S4
 gi|89950230|gb|ABD80245.1| SSU ribosomal protein S4P [Saccharophagus degradans 2-40]
          Length = 206

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +    P+ ++      PG HGQ R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPTCKLSRREGTDLFLKSGVRPLESKCKAEAAPGQHGQ-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARIKGATGENLLKLLEGRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVNG++VNI S++   GDVI V++KSK    +  +  +A +R   E++ VN +  
Sbjct: 119 SHKAILVNGKTVNIPSFQVNVGDVISVREKSKNQLRIQNSLGIAGQRADVEWVDVNTEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P        P  +  NL+VE YS+
Sbjct: 179 EGVFKRCPDRAD---LPAEINENLIVELYSK 206


>gi|323344662|ref|ZP_08084886.1| 30S ribosomal protein S4 [Prevotella oralis ATCC 33269]
 gi|323093932|gb|EFZ36509.1| 30S ribosomal protein S4 [Prevotella oralis ATCC 33269]
          Length = 201

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MAKYIGPKSKIARRFGEPIFGADK-VLSKRNFPPGQHGNNRRKKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F+ A ++ G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFERAAKADGITGEVLLQNLESRLDNVVFRLGLAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G+ VNI SY  K G ++ V++K+K L  +  A          +I  + ++    F+
Sbjct: 119 IVVDGKVVNIPSYSVKPGQIVGVREKAKSLEVIETALAGFNHSKYPWIEWDDNSKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|254509448|ref|ZP_05121526.1| ribosomal protein S4 [Vibrio parahaemolyticus 16]
 gi|323495528|ref|ZP_08100602.1| 30S ribosomal protein S4 [Vibrio sinaloensis DSM 21326]
 gi|219547621|gb|EED24668.1| ribosomal protein S4 [Vibrio parahaemolyticus 16]
 gi|323319409|gb|EGA72346.1| 30S ribosomal protein S4 [Vibrio sinaloensis DSM 21326]
          Length = 206

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+++ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVAIREKAQKQSRIKAALEVAEQREKPTWIEVDGGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEQLIVELYSK 206


>gi|315303380|ref|ZP_07873992.1| ribosomal protein S4 [Listeria ivanovii FSL F6-596]
 gi|313628248|gb|EFR96769.1| ribosomal protein S4 [Listeria ivanovii FSL F6-596]
          Length = 200

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQ   KQK++ 
Sbjct: 1   MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ F +A + +G    N +  LE RLD IVYR     T  AARQ VNH H
Sbjct: 60  MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY+   G VI V++KS + +++ E+  ++   VP+Y++ + + +  +  
Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLDVSSF-VPDYVTFDAETLTGSLN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP   +       +    +VEFYSR
Sbjct: 178 RIPERSE---LAAEINEAFIVEFYSR 200


>gi|311069452|ref|YP_003974375.1| 30S ribosomal protein S4 [Bacillus atrophaeus 1942]
 gi|310869969|gb|ADP33444.1| 30S ribosomal protein S4 [Bacillus atrophaeus 1942]
          Length = 200

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  L++RLD +VY+     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRTLFDKAAKLTGKHGENFMILLDARLDNLVYKLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I SY+ K G  I V++KS+ L+ V E+ ++    VPEY++ + + +  +  
Sbjct: 119 ILVDGSRVDIPSYQVKPGQTIGVREKSRNLSIVKESVEV-NNFVPEYLTFDAEKLEGSLT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VEFYSR
Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200


>gi|15599435|ref|NP_252929.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa PAO1]
 gi|107103755|ref|ZP_01367673.1| hypothetical protein PaerPA_01004826 [Pseudomonas aeruginosa PACS2]
 gi|116052274|ref|YP_788880.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889432|ref|YP_002438296.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa LESB58]
 gi|254237103|ref|ZP_04930426.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa C3719]
 gi|254242910|ref|ZP_04936232.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 2192]
 gi|296387204|ref|ZP_06876703.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa PAb1]
 gi|313111393|ref|ZP_07797198.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 39016]
 gi|12230936|sp|O52759|RS4_PSEAE RecName: Full=30S ribosomal protein S4
 gi|122261423|sp|Q02T56|RS4_PSEAB RecName: Full=30S ribosomal protein S4
 gi|226699107|sp|B7V667|RS4_PSEA8 RecName: Full=30S ribosomal protein S4
 gi|9950456|gb|AAG07627.1|AE004841_5 30S ribosomal protein S4 [Pseudomonas aeruginosa PAO1]
 gi|115587495|gb|ABJ13510.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169034|gb|EAZ54545.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa C3719]
 gi|126196288|gb|EAZ60351.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 2192]
 gi|218769655|emb|CAW25415.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa LESB58]
 gi|310883700|gb|EFQ42294.1| 30S ribosomal protein S4 [Pseudomonas aeruginosa 39016]
          Length = 206

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HGQ R+ + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQ-RRGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++EA R +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQEASRRKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ K GDV+ V++KSK    + +A +L  +R   E++ V+ D  
Sbjct: 119 SHKAITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALELCGQRGRVEWVEVDLDKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P+          +  NL+VE YS+
Sbjct: 179 AGTFKSAPARSD---LSADINENLIVELYSK 206


>gi|297618356|ref|YP_003703515.1| ribosomal protein S4 [Syntrophothermus lipocalidus DSM 12680]
 gi|297146193|gb|ADI02950.1| ribosomal protein S4 [Syntrophothermus lipocalidus DSM 12680]
          Length = 209

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +       K  +  + Y PG HG+ R+ KPS +G QLR 
Sbjct: 1   MGRYTGPACRLCRREGIKLYLKAERCYSEKCALERKPYIPGQHGRGRRGKPSEYGSQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG I E++FR+ F++A+R  G T  NL++ LE RLD +VYR  F  +   ARQ
Sbjct: 61  KQKAKRIYG-ILERQFRNYFEKAERQPGITGENLLALLERRLDNVVYRLGFAGSRPEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173
            + H H L+NGR VNI S   K GDVI+VK+KS + A   E  +Q A +  PE++ VN D
Sbjct: 120 LITHGHFLLNGRKVNIPSILVKVGDVIQVKEKSMESAKFKELQAQAAYKTPPEWLEVNAD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+    + +P   +       +  +L+VE YSR
Sbjct: 180 NLSGRVLALPRRDQ---IDAPIDEHLIVELYSR 209


>gi|33152930|ref|NP_874283.1| 30S ribosomal protein S4 [Haemophilus ducreyi 35000HP]
 gi|41017830|sp|Q7VKF7|RS4_HAEDU RecName: Full=30S ribosomal protein S4
 gi|33149155|gb|AAP96672.1| 30S ribosomal protein S4 [Haemophilus ducreyi 35000HP]
          Length = 208

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54
           M++    K K+ RR G +L+ +     + ++        PG HG  RK + S +G QLR 
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E++FR+ + EA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKVRRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V+H+ ++VNGR VNI SY+    DV+ V++KSK+ A +  + +LA +R+ P ++ V+  
Sbjct: 119 LVSHKSIVVNGRVVNIPSYQVSVDDVVTVREKSKKQARIKASLELASQREKPTWLEVDAV 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F R P           +  +L+VE YS+
Sbjct: 179 KMEGVFKRTPERSD---LSADINEHLIVELYSK 208


>gi|218779737|ref|YP_002431055.1| ribosomal protein S4 [Desulfatibacillum alkenivorans AK-01]
 gi|226697835|sp|B8FER0|RS4_DESAA RecName: Full=30S ribosomal protein S4
 gi|218761121|gb|ACL03587.1| ribosomal protein S4 [Desulfatibacillum alkenivorans AK-01]
          Length = 208

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  +I RR    L+ +       K   + RSY PG HGQ R++K S +G+QLR 
Sbjct: 1   MARYRGSVCRICRRENLKLFLKGDRCYSDKCAFDRRSYPPGQHGQ-RRTKISDYGIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG ++EK+F   FK+AD ++G T  NL+  LE RLD ++YR  F      ARQ
Sbjct: 60  KQKIKRMYG-LTEKQFHLTFKKADHAKGITGTNLLVNLERRLDNVIYRLGFADCRTQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  VNG  VNI S +   GD IEV++KS+ +A +  A +  A R +P+++ ++  
Sbjct: 119 MVRHNHFTVNGHKVNIPSAQVSIGDTIEVREKSRTVAVITNAMEAVARRGLPQWLELDKA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N        P   +D+  P  MQ  L+VE YS+
Sbjct: 179 NFKGVVNAYPVR-EDLTMP--MQEQLIVELYSK 208


>gi|156310431|ref|XP_001617741.1| hypothetical protein NEMVEDRAFT_v1g156832 [Nematostella vectensis]
 gi|156195585|gb|EDO25641.1| predicted protein [Nematostella vectensis]
          Length = 207

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 15/213 (7%)

Query: 2   SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           ++    K K+ RR G +L+ +        KS  +T+   PG HG+    + S FGLQLR 
Sbjct: 2   ARYIGPKAKLSRREGTDLFLKSARRSIADKSKFDTK---PGQHGRTSGQRTSDFGLQLRE 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR  F+ AD+ +G+T  NL+S LESRLD +VYR  F  T   ARQ
Sbjct: 59  KQKVKRMYGVL-EKQFRRYFEAADKKKGNTGANLLSLLESRLDNVVYRMGFGSTRSEARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V+H+ + VNG+SVNI SY  K GDV+ V++KSK+ A ++EA QLA +   P ++ V+ D
Sbjct: 118 LVSHKAITVNGQSVNIPSYMVKVGDVVAVREKSKKQARIVEALQLAGQVGFPAWVEVSAD 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF + P   +   +   +  +L+VE YSR
Sbjct: 178 KAEGTFKKSPDRDE---FGADINESLIVELYSR 207


>gi|24371853|ref|NP_715895.1| 30S ribosomal protein S4 [Shewanella oneidensis MR-1]
 gi|113968568|ref|YP_732361.1| 30S ribosomal protein S4 [Shewanella sp. MR-4]
 gi|114045731|ref|YP_736281.1| 30S ribosomal protein S4 [Shewanella sp. MR-7]
 gi|26399362|sp|P59131|RS4_SHEON RecName: Full=30S ribosomal protein S4
 gi|123030061|sp|Q0HNR3|RS4_SHESM RecName: Full=30S ribosomal protein S4
 gi|123326989|sp|Q0I081|RS4_SHESR RecName: Full=30S ribosomal protein S4
 gi|24345670|gb|AAN53340.1|AE015474_3 ribosomal protein S4 [Shewanella oneidensis MR-1]
 gi|113883252|gb|ABI37304.1| SSU ribosomal protein S4P [Shewanella sp. MR-4]
 gi|113887173|gb|ABI41224.1| SSU ribosomal protein S4P [Shewanella sp. MR-7]
          Length = 206

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLESAPGQHGA-RKPRLSEYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ V+VNGR VNI S++    DV+ +++KS+  A +  A +  A+R+ P ++ V+   M
Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP           +   L+VE YS+
Sbjct: 179 EGAFKRIPERSD---LSAEINEQLIVELYSK 206


>gi|34541515|ref|NP_905994.1| 30S ribosomal protein S4 [Porphyromonas gingivalis W83]
 gi|188995706|ref|YP_001929958.1| 30S ribosomal protein S4 [Porphyromonas gingivalis ATCC 33277]
 gi|41017819|sp|Q7MTN9|RS4_PORGI RecName: Full=30S ribosomal protein S4
 gi|226699103|sp|B2RLW6|RS4_PORG3 RecName: Full=30S ribosomal protein S4
 gi|34397832|gb|AAQ66893.1| ribosomal protein S4 [Porphyromonas gingivalis W83]
 gi|188595386|dbj|BAG34361.1| 30S ribosomal protein S4 [Porphyromonas gingivalis ATCC 33277]
          Length = 201

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ G+ ++G  K  ++ ++Y PG HG  R+ K S +GLQLR KQK K 
Sbjct: 1   MARYTGPKSKIARKFGDPIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGLQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR +F  A R++G T   LI FLE+RLD +V+R    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRHLFHRAQRAKGVTGELLIQFLEARLDNVVFRLGIAPTRSAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  VNI SY  K G VI V+++SK L  + +A          ++  +  ++    +
Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVRERSKSLEVIADALTGFNHSKYPWMEWDQSSLSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++  L+VE YS+
Sbjct: 179 HMPDRTD---IPENIKEQLIVELYSK 201


>gi|254362773|ref|ZP_04978855.1| ribosomal protein S4 [Mannheimia haemolytica PHL213]
 gi|261492716|ref|ZP_05989264.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495669|ref|ZP_05992115.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153094402|gb|EDN75251.1| ribosomal protein S4 [Mannheimia haemolytica PHL213]
 gi|261308776|gb|EEY10033.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311569|gb|EEY12724.1| ribosomal protein S4 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 208

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRA 54
           M++    K K+ RR G +L+ +     + ++        PG HG  RK + S +G QLR 
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E++FR+ + EA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKVRRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V+H+ ++VNGR VNI S++    DV+ V++KSK+ A +  + +LA +R+ P ++ V+  
Sbjct: 119 LVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDAT 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F R P           +  +L+VE YS+
Sbjct: 179 KMEGVFKRRPERSD---LSADINEHLIVELYSK 208


>gi|220928235|ref|YP_002505144.1| ribosomal protein S4 [Clostridium cellulolyticum H10]
 gi|254764580|sp|B8I807|RS4_CLOCE RecName: Full=30S ribosomal protein S4
 gi|219998563|gb|ACL75164.1| ribosomal protein S4 [Clostridium cellulolyticum H10]
          Length = 208

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR GE L+ +       K  V  R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MARYTDASCRLCRREGEKLFLKGERCYTDKCSVARRPYAPGQHGQGRKKMSEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           K K++++YG + E +F   F+ A R +G T  NL+  LE+RLD +VYR     +   +RQ
Sbjct: 60  KAKVRRFYGVL-EGQFSKYFEVASRRKGITGENLLQILETRLDNVVYRLGLGTSRPESRQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHD 173
            V H H  VNG+ VNI SY  K GDVI V   SK    V    ++A   V P+++  + +
Sbjct: 119 LVTHGHFTVNGKRVNIPSYLIKVGDVIAVADNSKNSPKVKSIREIAGGKVIPKWLEFDEE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   V +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGKVVALPAR-EDIDLP--IKEHLIVELYSK 208


>gi|33357881|pdb|1P6G|D Chain D, Real Space Refined Coordinates Of The 30s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
           State Of E. Coli 70s Ribosome
 gi|33357958|pdb|1P87|D Chain D, Real Space Refined Coordinates Of The 30s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The
           Initiation-Like State Of E. Coli 70s Ribosome
 gi|83754042|pdb|2AVY|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|83754098|pdb|2AW7|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 30s Subunit Of The Second 70s Ribosome. The Entire
           Crystal Structure Contains Two 70s Ribosomes And Is
           Described In Remark 400.
 gi|118138056|pdb|2I2P|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|118138127|pdb|2I2U|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|157836026|pdb|2QOU|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 30s Subunit Of The First 70s Ribosome,
           With Spectinomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|157836077|pdb|2QOW|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 30s Subunit Of The Second 70s
           Ribosome, With Spectinomycin Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|157836130|pdb|2QOY|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome, With Spectinomycin And Neomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|157836181|pdb|2QP0|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome, With Spectinomycin And Neomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|158429701|pdb|2QAL|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Neomycin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429753|pdb|2QAN|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Neomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429811|pdb|2QB9|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Gentamicin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429863|pdb|2QBB|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Gentamicin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429915|pdb|2QBD|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 30s Subunit Of The
           First 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429967|pdb|2QBF|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 30s Subunit Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158430021|pdb|2QBH|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 30s
           Subunit Of The First 70s Ribosome, With Gentamicin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158430074|pdb|2QBJ|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 30s
           Subunit Of The Second 70s Ribosome, With Gentamicin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431374|pdb|2Z4K|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           30s Subunit Of The First 70s Ribosome, With Paromomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431427|pdb|2Z4M|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           30s Subunit Of The Second 70s Ribosome, With Paromomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|168988791|pdb|2VHO|D Chain D, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 3 Of 4)
 gi|168988812|pdb|2VHP|D Chain D, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 4 Of 4)
 gi|197107281|pdb|3DF1|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Hygromycin B Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|197107333|pdb|3DF3|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Hygromycin B Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|224510725|pdb|3FIH|D Chain D, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
           Consists Of The 30s Subunit, Trnas And The Ternary
           Complex.
 gi|294662220|pdb|2WWL|D Chain D, E.Coli 70s Ribosome Stalled During Translation Of Tnac
           Leader Peptide. This File Contains The 30s, The P-Site
           Trna And The Tnac Leader Peptide (Part 1 Of 2).
 gi|308387968|pdb|3OFO|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome.
 gi|308387989|pdb|3OFP|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome.
 gi|309320026|pdb|3OFA|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 30s Subunit Of
           The First 70s Ribosome.
 gi|309320047|pdb|3OFB|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 30s Subunit Of
           The Second 70s Ribosome.
 gi|309320130|pdb|3OFX|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome.
 gi|309320151|pdb|3OFY|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome
 gi|315113615|pdb|3OAQ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome.
 gi|315113636|pdb|3OAR|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome.
 gi|329665995|pdb|3J00|D Chain D, Structure Of The Ribosome-Secye Complex In The Membrane
           Environment
          Length = 205

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 126/210 (60%), Gaps = 10/210 (4%)

Query: 2   SKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQK 57
           ++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK
Sbjct: 1   ARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQK 59

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+
Sbjct: 60  VRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVS 118

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMV 176
           H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M 
Sbjct: 119 HKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKME 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            TF R P           +  +L+VE YS+
Sbjct: 179 GTFKRKPERSD---LSADINEHLIVELYSK 205


>gi|16800706|ref|NP_470974.1| 30S ribosomal protein S4 [Listeria innocua Clip11262]
 gi|226224197|ref|YP_002758304.1| ribosomal protein S4 [Listeria monocytogenes Clip81459]
 gi|26399441|sp|Q92BB2|RS4_LISIN RecName: Full=30S ribosomal protein S4
 gi|259495285|sp|C1KVP3|RS4_LISMC RecName: Full=30S ribosomal protein S4
 gi|16414125|emb|CAC96869.1| ribosomal protein S4 [Listeria innocua Clip11262]
 gi|225876659|emb|CAS05368.1| ribosomal protein S4 [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|313618704|gb|EFR90630.1| ribosomal protein S4 [Listeria innocua FSL S4-378]
          Length = 200

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQ   KQK++ 
Sbjct: 1   MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ F +A + +G    N +  LE RLD IVYR     T  AARQ VNH H
Sbjct: 60  MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY+   G VI V++KS + +++ E+ +++   VPEY++ + + +  +  
Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAETLTGSLN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200


>gi|88812733|ref|ZP_01127979.1| 30S ribosomal protein S4 [Nitrococcus mobilis Nb-231]
 gi|88789971|gb|EAR21092.1| 30S ribosomal protein S4 [Nitrococcus mobilis Nb-231]
          Length = 206

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ + +  P++ +      PG HGQ R+ + S +GLQLR KQ
Sbjct: 1   MARYTGPTCKLARREGTDLFLKSRVRPLDNKCKLDTPPGQHGQ-RRGRISDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  +KEADR +G+T   L+  LESRLD  VYR  F  T   ARQ V
Sbjct: 60  KVRRTYGVL-ERQFRKYYKEADRRKGNTGETLLQLLESRLDNTVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           NHR +LVNGR  NI S     GD++ VK+K+K+   V  A ++A++  +P ++ V+    
Sbjct: 119 NHRAILVNGRVSNISSRILNPGDLVSVKEKAKKQLRVQAALEMAQQIGLPAWVEVDTKQF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRMPDRSD---LSADINEHLIVELYSK 206


>gi|303237525|ref|ZP_07324090.1| ribosomal protein S4 [Prevotella disiens FB035-09AN]
 gi|302482345|gb|EFL45375.1| ribosomal protein S4 [Prevotella disiens FB035-09AN]
          Length = 202

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 116/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  +  R++ PG HG  R+ K S +G QL  KQK K 
Sbjct: 1   MARYIGPKSRIARRFGEPIFGADK-VLAKRNFPPGQHGNNRRRKVSEYGAQLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F  A ++ G T   L+  LESRLD +VYR    PT  AARQ VNH+H
Sbjct: 60  TYGVL-ERQFRNMFDRAAKASGITGEVLLQNLESRLDNVVYRLGLAPTRAAARQLVNHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNG  VNI SY  K GD++ V++K+K L  +  A          +I  + ++    F+
Sbjct: 119 IVVNGGVVNIASYAVKAGDIVGVREKAKSLEVIEAALAGFNHSKYPWIEWDENSKSGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P+       P  ++  L+VE YS+
Sbjct: 179 HQPAR---EDIPENIKEQLIVELYSK 201


>gi|298207752|ref|YP_003715931.1| 30S ribosomal protein S4 [Croceibacter atlanticus HTCC2559]
 gi|83850390|gb|EAP88258.1| 30S ribosomal protein S4 [Croceibacter atlanticus HTCC2559]
          Length = 201

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLAEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR +FK+A  + G T   L+   ESRLD +VYR    P+   ARQ V+HR
Sbjct: 60  YTYG-ILERQFRGLFKKATAATGITGEVLLQLCESRLDNVVYRMGISPSRPGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY+ K GDV+ V++KSK L ++  +       V E+I+ N++    T+
Sbjct: 119 HITVNGELVNIPSYQLKAGDVVGVREKSKSLDAIQSSLS-NNSTVYEWITWNNEKKEGTY 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P     V  P  +    +VE YS+
Sbjct: 178 VSVPGR---VQIPENINEQFIVELYSK 201


>gi|126176331|ref|YP_001052480.1| 30S ribosomal protein S4 [Shewanella baltica OS155]
 gi|152998773|ref|YP_001364454.1| 30S ribosomal protein S4 [Shewanella baltica OS185]
 gi|160873349|ref|YP_001552665.1| 30S ribosomal protein S4 [Shewanella baltica OS195]
 gi|217975177|ref|YP_002359928.1| 30S ribosomal protein S4 [Shewanella baltica OS223]
 gi|304412788|ref|ZP_07394390.1| ribosomal protein S4 [Shewanella baltica OS183]
 gi|307307452|ref|ZP_07587187.1| ribosomal protein S4 [Shewanella baltica BA175]
 gi|171704521|sp|A6WHV2|RS4_SHEB8 RecName: Full=30S ribosomal protein S4
 gi|171769980|sp|A3DA48|RS4_SHEB5 RecName: Full=30S ribosomal protein S4
 gi|189045397|sp|A9KWC5|RS4_SHEB9 RecName: Full=30S ribosomal protein S4
 gi|254764609|sp|B8EBI1|RS4_SHEB2 RecName: Full=30S ribosomal protein S4
 gi|125999536|gb|ABN63611.1| SSU ribosomal protein S4P [Shewanella baltica OS155]
 gi|151363391|gb|ABS06391.1| ribosomal protein S4 [Shewanella baltica OS185]
 gi|160858871|gb|ABX47405.1| ribosomal protein S4 [Shewanella baltica OS195]
 gi|217500312|gb|ACK48505.1| ribosomal protein S4 [Shewanella baltica OS223]
 gi|304348868|gb|EFM13284.1| ribosomal protein S4 [Shewanella baltica OS183]
 gi|306910240|gb|EFN40673.1| ribosomal protein S4 [Shewanella baltica BA175]
 gi|315265577|gb|ADT92430.1| ribosomal protein S4 [Shewanella baltica OS678]
          Length = 206

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R++G+T  NL+  LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARTKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ ++VNGR VNI S++    DV+ +++KS+  A +  A +  A+R+ P ++ V++  M
Sbjct: 119 SHKSIMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDNAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRVPERSD---LSAEINEQLIVELYSK 206


>gi|255319791|ref|ZP_05360996.1| ribosomal protein S4 [Acinetobacter radioresistens SK82]
 gi|262380324|ref|ZP_06073478.1| ribosomal protein S4 [Acinetobacter radioresistens SH164]
 gi|255303110|gb|EET82322.1| ribosomal protein S4 [Acinetobacter radioresistens SK82]
 gi|262297770|gb|EEY85685.1| ribosomal protein S4 [Acinetobacter radioresistens SH164]
          Length = 207

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  +  Y  LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHAKAPGQHGQSRAKQSEY-SLQLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 60  QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 118

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P +I V+H  
Sbjct: 119 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKSAIELAAQRGIPAWIEVDHSK 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              TF   P        P  +  +L+VE YS+
Sbjct: 179 FEGTFKAAPDRSD---LPAEINESLIVELYSK 207


>gi|47093459|ref|ZP_00231223.1| ribosomal protein S4 [Listeria monocytogenes str. 4b H7858]
 gi|47096809|ref|ZP_00234391.1| ribosomal protein S4 [Listeria monocytogenes str. 1/2a F6854]
 gi|217964250|ref|YP_002349928.1| ribosomal protein S4 [Listeria monocytogenes HCC23]
 gi|224499177|ref|ZP_03667526.1| 30S ribosomal protein S4 [Listeria monocytogenes Finland 1988]
 gi|224501464|ref|ZP_03669771.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL R2-561]
 gi|254824345|ref|ZP_05229346.1| ribosomal protein S4 [Listeria monocytogenes FSL J1-194]
 gi|254828169|ref|ZP_05232856.1| ribosomal protein S4 [Listeria monocytogenes FSL N3-165]
 gi|254831997|ref|ZP_05236652.1| 30S ribosomal protein S4 [Listeria monocytogenes 10403S]
 gi|254898237|ref|ZP_05258161.1| 30S ribosomal protein S4 [Listeria monocytogenes J0161]
 gi|254912270|ref|ZP_05262282.1| ribosomal protein S4 [Listeria monocytogenes J2818]
 gi|254931536|ref|ZP_05264895.1| ribosomal protein S4 [Listeria monocytogenes HPB2262]
 gi|254936597|ref|ZP_05268294.1| ribosomal protein S4 [Listeria monocytogenes F6900]
 gi|254993888|ref|ZP_05276078.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL J2-064]
 gi|255026363|ref|ZP_05298349.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL J2-003]
 gi|255522552|ref|ZP_05389789.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL J1-175]
 gi|284801988|ref|YP_003413853.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5578]
 gi|284995130|ref|YP_003416898.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5923]
 gi|290893191|ref|ZP_06556178.1| ribosomal protein S4 [Listeria monocytogenes FSL J2-071]
 gi|300765979|ref|ZP_07075950.1| ribosomal protein S4 [Listeria monocytogenes FSL N1-017]
 gi|315282534|ref|ZP_07870925.1| ribosomal protein S4 [Listeria marthii FSL S4-120]
 gi|254764594|sp|B8DHE5|RS4_LISMH RecName: Full=30S ribosomal protein S4
 gi|47014842|gb|EAL05793.1| ribosomal protein S4 [Listeria monocytogenes str. 1/2a F6854]
 gi|47018187|gb|EAL08956.1| ribosomal protein S4 [Listeria monocytogenes str. 4b H7858]
 gi|217333520|gb|ACK39314.1| ribosomal protein S4 [Listeria monocytogenes HCC23]
 gi|258600556|gb|EEW13881.1| ribosomal protein S4 [Listeria monocytogenes FSL N3-165]
 gi|258609194|gb|EEW21802.1| ribosomal protein S4 [Listeria monocytogenes F6900]
 gi|284057550|gb|ADB68491.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5578]
 gi|284060597|gb|ADB71536.1| 30S ribosomal protein S4 [Listeria monocytogenes 08-5923]
 gi|290557173|gb|EFD90700.1| ribosomal protein S4 [Listeria monocytogenes FSL J2-071]
 gi|293583091|gb|EFF95123.1| ribosomal protein S4 [Listeria monocytogenes HPB2262]
 gi|293590249|gb|EFF98583.1| ribosomal protein S4 [Listeria monocytogenes J2818]
 gi|293593579|gb|EFG01340.1| ribosomal protein S4 [Listeria monocytogenes FSL J1-194]
 gi|300513297|gb|EFK40373.1| ribosomal protein S4 [Listeria monocytogenes FSL N1-017]
 gi|307571182|emb|CAR84361.1| ribosomal protein S4 [Listeria monocytogenes L99]
 gi|313608550|gb|EFR84435.1| ribosomal protein S4 [Listeria monocytogenes FSL F2-208]
 gi|313613822|gb|EFR87575.1| ribosomal protein S4 [Listeria marthii FSL S4-120]
 gi|313623582|gb|EFR93757.1| ribosomal protein S4 [Listeria innocua FSL J1-023]
 gi|328464963|gb|EGF36242.1| 30S ribosomal protein S4 [Listeria monocytogenes 1816]
 gi|328474830|gb|EGF45634.1| 30S ribosomal protein S4 [Listeria monocytogenes 220]
          Length = 200

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQ   KQK++ 
Sbjct: 1   MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ F +A + +G    N +  LE RLD IVYR     T  AARQ VNH H
Sbjct: 60  MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY+   G VI V++KS + +++ E+ +++   VPEY++ + + +  +  
Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAEKLTGSLN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200


>gi|327439214|dbj|BAK15579.1| ribosomal protein S4 [Solibacillus silvestris StLB046]
          Length = 200

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   + K S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGISLSGTGKE-IAKRPYAPGQHGPNSRGKKSEYGLQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ +  A + +G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFKNTYLRAGKLQGVHGENFMILLETRLDNLVYRLGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I SY  K G  I +++KS  L+ V E+ ++    VPEY+S + D+ V TFV
Sbjct: 119 ILVDGNRVDIPSYSVKPGQTISLREKSANLSVVAESIEV-NSFVPEYLSFDADSKVGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 178 RLPERSE---LSSEINEQFIVEFYSR 200


>gi|222098129|ref|YP_002532186.1| 30S ribosomal protein s4 [Bacillus cereus Q1]
 gi|254764569|sp|B9J159|RS4_BACCQ RecName: Full=30S ribosomal protein S4
 gi|221242187|gb|ACM14897.1| ribosomal protein S4 (30S ribosomal protein S4) [Bacillus cereus
           Q1]
          Length = 200

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 ITVDGSRVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200


>gi|56460992|ref|YP_156273.1| 30S ribosomal protein S4 [Idiomarina loihiensis L2TR]
 gi|61215388|sp|Q5QXV7|RS4_IDILO RecName: Full=30S ribosomal protein S4
 gi|56180002|gb|AAV82724.1| Ribosomal protein S4 [Idiomarina loihiensis L2TR]
          Length = 206

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIETAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ V+VNG+ VNI S++ +  DV+ V++K+K+ A +  A +LAE R+ P +I V+++ +
Sbjct: 119 SHKAVVVNGQVVNIPSFKVRPEDVVSVREKAKKQARIGAALELAEQREKPVWIEVDNNKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206


>gi|268316434|ref|YP_003290153.1| 30S ribosomal protein S4 [Rhodothermus marinus DSM 4252]
 gi|262333968|gb|ACY47765.1| ribosomal protein S4 [Rhodothermus marinus DSM 4252]
          Length = 200

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 127/206 (61%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  +  + Y PG HG+ R++K S + +QL+ KQK+K 
Sbjct: 1   MARYRGPKQKIARRFGEPIFGPSK-ALERKPYPPGQHGRTRRAKESEYAVQLKEKQKVKH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A R +G T  NL+  LE+RLD  VYR  F  T   ARQ V HRH
Sbjct: 60  IYG-LLERQFRNLFEKATRKKGITGENLLKMLEARLDNTVYRMGFARTRRQARQLVVHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNG+ VN+ SY+ + GDV+ V+ KS+QLA + E  +   R+ P ++ V+   M   F+
Sbjct: 119 IMVNGQVVNVPSYQLRPGDVVAVRPKSRQLAVIQENIKRLRRNFP-WLEVDRKEMQGKFL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P+       P  ++ +L+VE YS+
Sbjct: 178 DYPNR---EDIPENIREHLIVELYSK 200


>gi|328951209|ref|YP_004368544.1| ribosomal protein S4 [Marinithermus hydrothermalis DSM 14884]
 gi|328451533|gb|AEB12434.1| ribosomal protein S4 [Marinithermus hydrothermalis DSM 14884]
          Length = 205

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +      +I RR+G N+    K    ++ R Y PG HGQRR  +PS + ++LR KQK+
Sbjct: 1   MGRYRGPVVRIARRLGINIAETEKVQRYMDRRPYPPGQHGQRRSRRPSDYAVRLREKQKL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG ++EK+FR++F+EA R +G T    +  LESRLD +V+R     T   ARQFV H
Sbjct: 61  RYLYG-LNEKQFRNLFEEATRKKGVTGTVFLQLLESRLDNVVFRLGIATTRRQARQFVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
           RH+LVNG+ V+  SYR K GDVI V ++SK+L    E ++ A+ R +P ++  + + M  
Sbjct: 120 RHILVNGKRVDRPSYRVKPGDVISVAERSKKLVVFQENAEAAKRRKLPMWLEYDPETMTG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            FVR+P   +     + +   LV+E+YSR
Sbjct: 180 KFVRLPERDE---LAIPVNEQLVIEYYSR 205


>gi|300309481|ref|YP_003773573.1| 30S ribosomal protein S4 [Herbaspirillum seropedicae SmR1]
 gi|300072266|gb|ADJ61665.1| 30S ribosomal subunit S4 protein [Herbaspirillum seropedicae SmR1]
          Length = 207

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +G QLR KQ
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KVKRMYGVL-ERQFRRYFAEADRRKGNTGETLLKLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175
           +H+ + VNG+ VNI SY  K GDVI V++K+K+   + EA  LAE +  P+++SV+   +
Sbjct: 120 SHKALTVNGQVVNIASYSVKAGDVIAVREKAKKQVRIAEALSLAESNGFPQWVSVDSKKL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P   +       +  +L+VE YSR
Sbjct: 180 EGTFKSSPDRSE---IAADVNESLIVELYSR 207


>gi|116873025|ref|YP_849806.1| 30S ribosomal protein S4 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|289434877|ref|YP_003464749.1| ribosomal protein S4 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|123466377|sp|A0AJ45|RS4_LISW6 RecName: Full=30S ribosomal protein S4
 gi|116741903|emb|CAK21027.1| 30S ribosomal protein S4 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|289171121|emb|CBH27663.1| ribosomal protein S4 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|313633056|gb|EFR99970.1| ribosomal protein S4 [Listeria seeligeri FSL N1-067]
 gi|313638010|gb|EFS03298.1| ribosomal protein S4 [Listeria seeligeri FSL S4-171]
          Length = 200

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQ   KQK++ 
Sbjct: 1   MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ F +A + +G    N +  LE RLD IVYR     T  AARQ VNH H
Sbjct: 60  MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY+   G VI V++KS + +++ E+  ++   VPEY++ + + +  +  
Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLDVSSF-VPEYVTFDAETLTGSLN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP   +       +    +VEFYSR
Sbjct: 178 RIPERSE---LAAEINEAFIVEFYSR 200


>gi|253734496|ref|ZP_04868661.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253727550|gb|EES96279.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 200

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K G  I V++KS++L  ++E+ ++    VPEY++ + D++  TF+
Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIIESVEI-NNFVPEYLNFDADSLTGTFI 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200


>gi|30264729|ref|NP_847106.1| 30S ribosomal protein S4 [Bacillus anthracis str. Ames]
 gi|42783839|ref|NP_981086.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 10987]
 gi|47530203|ref|YP_021552.1| 30S ribosomal protein S4 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187548|ref|YP_030801.1| 30S ribosomal protein S4 [Bacillus anthracis str. Sterne]
 gi|49481409|ref|YP_038704.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52140852|ref|YP_085977.1| 30S ribosomal protein S4 [Bacillus cereus E33L]
 gi|65322027|ref|ZP_00394986.1| COG0522: Ribosomal protein S4 and related proteins [Bacillus
           anthracis str. A2012]
 gi|118479796|ref|YP_896947.1| 30S ribosomal protein S4 [Bacillus thuringiensis str. Al Hakam]
 gi|165869836|ref|ZP_02214494.1| ribosomal protein S4 [Bacillus anthracis str. A0488]
 gi|167633851|ref|ZP_02392174.1| ribosomal protein S4 [Bacillus anthracis str. A0442]
 gi|167638038|ref|ZP_02396316.1| ribosomal protein S4 [Bacillus anthracis str. A0193]
 gi|170685670|ref|ZP_02876893.1| ribosomal protein S4 [Bacillus anthracis str. A0465]
 gi|170705531|ref|ZP_02895995.1| ribosomal protein S4 [Bacillus anthracis str. A0389]
 gi|177651189|ref|ZP_02934020.1| ribosomal protein S4 [Bacillus anthracis str. A0174]
 gi|190568368|ref|ZP_03021276.1| ribosomal protein S4 [Bacillus anthracis Tsiankovskii-I]
 gi|196032907|ref|ZP_03100320.1| ribosomal protein S4 [Bacillus cereus W]
 gi|196040797|ref|ZP_03108095.1| ribosomal protein S4 [Bacillus cereus NVH0597-99]
 gi|218905885|ref|YP_002453719.1| ribosomal protein S4 [Bacillus cereus AH820]
 gi|225866636|ref|YP_002752014.1| 30S ribosomal protein S4 [Bacillus cereus 03BB102]
 gi|227817448|ref|YP_002817457.1| 30S ribosomal protein S4 [Bacillus anthracis str. CDC 684]
 gi|228917301|ref|ZP_04080856.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929709|ref|ZP_04092726.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935965|ref|ZP_04098775.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948386|ref|ZP_04110669.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228987906|ref|ZP_04148014.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229093753|ref|ZP_04224852.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-42]
 gi|229124225|ref|ZP_04253417.1| 30S ribosomal protein S4 [Bacillus cereus 95/8201]
 gi|229158263|ref|ZP_04286330.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 4342]
 gi|229186914|ref|ZP_04314069.1| 30S ribosomal protein S4 [Bacillus cereus BGSC 6E1]
 gi|229602554|ref|YP_002868937.1| 30S ribosomal protein S4 [Bacillus anthracis str. A0248]
 gi|254687468|ref|ZP_05151324.1| 30S ribosomal protein S4 [Bacillus anthracis str. CNEVA-9066]
 gi|254725030|ref|ZP_05186813.1| 30S ribosomal protein S4 [Bacillus anthracis str. A1055]
 gi|254736768|ref|ZP_05194474.1| 30S ribosomal protein S4 [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741805|ref|ZP_05199492.1| 30S ribosomal protein S4 [Bacillus anthracis str. Kruger B]
 gi|254754597|ref|ZP_05206632.1| 30S ribosomal protein S4 [Bacillus anthracis str. Vollum]
 gi|254757429|ref|ZP_05209456.1| 30S ribosomal protein S4 [Bacillus anthracis str. Australia 94]
 gi|300118469|ref|ZP_07056212.1| 30S ribosomal protein S4 [Bacillus cereus SJ1]
 gi|301056163|ref|YP_003794374.1| 30S ribosomal protein S4 [Bacillus anthracis CI]
 gi|38372415|sp|Q81KT2|RS4_BACAN RecName: Full=30S ribosomal protein S4
 gi|61215457|sp|Q633E0|RS4_BACCZ RecName: Full=30S ribosomal protein S4
 gi|61215551|sp|Q6HCM2|RS4_BACHK RecName: Full=30S ribosomal protein S4
 gi|61215626|sp|Q72Z76|RS4_BACC1 RecName: Full=30S ribosomal protein S4
 gi|152060934|sp|A0RJP7|RS4_BACAH RecName: Full=30S ribosomal protein S4
 gi|226697800|sp|B7JS31|RS4_BACC0 RecName: Full=30S ribosomal protein S4
 gi|254764566|sp|C3PBC1|RS4_BACAA RecName: Full=30S ribosomal protein S4
 gi|254764567|sp|C3L9W4|RS4_BACAC RecName: Full=30S ribosomal protein S4
 gi|254764568|sp|C1EV03|RS4_BACC3 RecName: Full=30S ribosomal protein S4
 gi|30259404|gb|AAP28592.1| 30S ribosomal protein S4 [Bacillus anthracis str. Ames]
 gi|42739769|gb|AAS43694.1| ribosomal protein S4 [Bacillus cereus ATCC 10987]
 gi|47505351|gb|AAT34027.1| ribosomal protein S4 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181475|gb|AAT56851.1| ribosomal protein S4 [Bacillus anthracis str. Sterne]
 gi|49332965|gb|AAT63611.1| ribosomal protein S4 (30S ribosomal protein S4) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974321|gb|AAU15871.1| ribosomal protein S4 (30S ribosomal protein S4) [Bacillus cereus
           E33L]
 gi|118419021|gb|ABK87440.1| SSU ribosomal protein S4P [Bacillus thuringiensis str. Al Hakam]
 gi|164714665|gb|EDR20184.1| ribosomal protein S4 [Bacillus anthracis str. A0488]
 gi|167513855|gb|EDR89223.1| ribosomal protein S4 [Bacillus anthracis str. A0193]
 gi|167530652|gb|EDR93354.1| ribosomal protein S4 [Bacillus anthracis str. A0442]
 gi|170129656|gb|EDS98519.1| ribosomal protein S4 [Bacillus anthracis str. A0389]
 gi|170670134|gb|EDT20874.1| ribosomal protein S4 [Bacillus anthracis str. A0465]
 gi|172083015|gb|EDT68077.1| ribosomal protein S4 [Bacillus anthracis str. A0174]
 gi|190560624|gb|EDV14601.1| ribosomal protein S4 [Bacillus anthracis Tsiankovskii-I]
 gi|195994336|gb|EDX58291.1| ribosomal protein S4 [Bacillus cereus W]
 gi|196028251|gb|EDX66860.1| ribosomal protein S4 [Bacillus cereus NVH0597-99]
 gi|218535551|gb|ACK87949.1| ribosomal protein S4 [Bacillus cereus AH820]
 gi|225790794|gb|ACO31011.1| 30S ribosomal protein S4 [Bacillus cereus 03BB102]
 gi|227006605|gb|ACP16348.1| 30S ribosomal protein S4 [Bacillus anthracis str. CDC 684]
 gi|228596651|gb|EEK54316.1| 30S ribosomal protein S4 [Bacillus cereus BGSC 6E1]
 gi|228625221|gb|EEK81981.1| 30S ribosomal protein S4 [Bacillus cereus ATCC 4342]
 gi|228659527|gb|EEL15175.1| 30S ribosomal protein S4 [Bacillus cereus 95/8201]
 gi|228689638|gb|EEL43446.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-42]
 gi|228771829|gb|EEM20287.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228811373|gb|EEM57711.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823733|gb|EEM69555.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829888|gb|EEM75508.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842342|gb|EEM87435.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266962|gb|ACQ48599.1| 30S ribosomal protein S4 [Bacillus anthracis str. A0248]
 gi|298724141|gb|EFI64840.1| 30S ribosomal protein S4 [Bacillus cereus SJ1]
 gi|300378332|gb|ADK07236.1| 30S ribosomal protein S4 [Bacillus cereus biovar anthracis str. CI]
          Length = 200

 Score =  214 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200


>gi|304404108|ref|ZP_07385770.1| ribosomal protein S4 [Paenibacillus curdlanolyticus YK9]
 gi|304347086|gb|EFM12918.1| ribosomal protein S4 [Paenibacillus curdlanolyticus YK9]
          Length = 200

 Score =  214 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K K+ RR+G +L G  K  +  R + PG HG   + K S +G+QL+ KQK++ 
Sbjct: 1   MSRYTGPKFKLSRRLGISLSGTGKE-LAKRPFPPGQHGANLRKKISGYGVQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+FR++F  A + +G +  N +  LESRLD +VYR  F  +   ARQ V+H H
Sbjct: 60  MYG-LNEKQFRNLFDRASKQKGISGENFMFLLESRLDNLVYRLGFANSRAGARQLVSHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SY    GDVI ++++S+ + S+ EA + +   VP Y+ +N   +   F+
Sbjct: 119 VTVNGKKVDIASYTVALGDVIGLRERSRSMKSIKEARE-SRSHVPNYLDLNEAALEGKFL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 178 RLPERAE---LSQDIDEKQIVEFYSR 200


>gi|304413169|ref|ZP_07394642.1| 30S ribosomal subunit protein S4 [Candidatus Regiella insecticola
           LSR1]
 gi|304284012|gb|EFL92405.1| 30S ribosomal subunit protein S4 [Candidatus Regiella insecticola
           LSR1]
          Length = 206

 Score =  214 bits (544), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG   K + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRTIDSKCKIDQPPGQHGA-HKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARLKGNTGENLLGLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNGR VNI SY+     +I +++K+K+ + +  A +L E R+ P ++ V+   M
Sbjct: 119 SHKGILVNGRVVNIASYQVLPNAIISIREKAKKQSRIRAALELFEQREKPIWLEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + R+P        P  +  +L+VE YS+
Sbjct: 179 EGVYKRLPERTD---LPADINEHLIVELYSK 206


>gi|134294468|ref|YP_001118203.1| 30S ribosomal protein S4 [Burkholderia vietnamiensis G4]
 gi|134137625|gb|ABO53368.1| SSU ribosomal protein S4P [Burkholderia vietnamiensis G4]
          Length = 213

 Score =  214 bits (544), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 125/213 (58%), Gaps = 15/213 (7%)

Query: 2   SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           ++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR 
Sbjct: 8   ARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLRE 64

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   ARQ
Sbjct: 65  KQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEARQ 123

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V+H+ + VNG   N+ S + K GDVI +++K+K+ A ++EA  LAE+  +P +++V+  
Sbjct: 124 LVSHKSITVNGVVANVPSQQVKAGDVIAIREKAKKQARIIEALSLAEQGGMPSWVAVDAK 183

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF ++P           +  +L+VE YSR
Sbjct: 184 KFEGTFKQMPERAD---IAGDINESLIVELYSR 213


>gi|206977164|ref|ZP_03238063.1| 30S ribosomal protein S4 [Bacillus cereus H3081.97]
 gi|217962143|ref|YP_002340713.1| 30S ribosomal protein S4 [Bacillus cereus AH187]
 gi|229141392|ref|ZP_04269930.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST26]
 gi|229198816|ref|ZP_04325510.1| 30S ribosomal protein S4 [Bacillus cereus m1293]
 gi|226697803|sp|B7HSJ2|RS4_BACC7 RecName: Full=30S ribosomal protein S4
 gi|206744649|gb|EDZ56057.1| 30S ribosomal protein S4 [Bacillus cereus H3081.97]
 gi|217062938|gb|ACJ77188.1| ribosomal protein S4 [Bacillus cereus AH187]
 gi|228584652|gb|EEK42776.1| 30S ribosomal protein S4 [Bacillus cereus m1293]
 gi|228642173|gb|EEK98466.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST26]
          Length = 200

 Score =  214 bits (544), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSSNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200


>gi|94312223|ref|YP_585433.1| 30S ribosomal protein S4 [Cupriavidus metallidurans CH34]
 gi|152112253|sp|Q1LI62|RS4_RALME RecName: Full=30S ribosomal protein S4
 gi|93356075|gb|ABF10164.1| 30S ribosomal subunit protein S4 [Cupriavidus metallidurans CH34]
          Length = 207

 Score =  214 bits (544), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ +LVNG ++N+ S + K GD++ V+++SK+   + EA  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGETLNVPSAQIKSGDIVSVREQSKKQVRIAEALSLAEQSGFPTWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                T+ + P           +  +L+VE YSR
Sbjct: 177 KKFEGTYKQAPDRAD---ISGDINESLIVELYSR 207


>gi|14278533|pdb|1I94|D Chain D, Crystal Structures Of The Small Ribosomal Subunit With
           Tetracycline, Edeine And If3
 gi|14278554|pdb|1I95|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Edeine
 gi|14278575|pdb|1I96|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With The Translation
           Initiation Factor If3 (C-Terminal Domain)
 gi|14278597|pdb|1I97|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Tetracycline
 gi|20663889|pdb|1J5E|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit
 gi|27065879|pdb|1N32|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The First Codon
           Position At The A Site With Paromomycin
 gi|27065906|pdb|1N33|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The Second Codon
           Position At The A Site With Paromomycin
 gi|27065933|pdb|1N34|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Codon And
           Crystallographically Disordered Near-Cognate Transfer
           Rna Anticodon Stem-Loop Mismatched At The First Codon
           Position
 gi|27065959|pdb|1N36|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Crystallographically
           Disordered Codon And Near-Cognate Transfer Rna Anticodon
           Stem-Loop Mismatched At The Second Codon Position
 gi|34811532|pdb|1PNS|D Chain D, Crystal Structure Of A Streptomycin Dependent Ribosome
           From E. Coli, 30s Subunit Of 70s Ribosome. This File,
           1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
           Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
 gi|34811588|pdb|1PNX|D Chain D, Crystal Structure Of The Wild Type Ribosome From E. Coli,
           30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
           Only Molecules Of The 30s Ribosomal Subunit. The 50s
           Subunit Is In The Pdb File 1pny.
 gi|56966326|pdb|1VOQ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966379|pdb|1VOS|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966432|pdb|1VOV|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966485|pdb|1VOX|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966538|pdb|1VOZ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|149241278|pdb|2E5L|D Chain D, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
           The Shine- Dalgarno Interaction
 gi|224510686|pdb|3FIC|D Chain D, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
           And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
           6.4 A Cryo-Em Map. This File Contains The 30s Subunit
           And The Ligands
 gi|226887632|pdb|2ZM6|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
           Ribosomal Subunit
 gi|300508608|pdb|3MR8|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508663|pdb|3MS0|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s).
 gi|322812553|pdb|3PYN|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812606|pdb|3PYQ|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The Second 70s
           Ribosome.
 gi|322812659|pdb|3PYS|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812712|pdb|3PYU|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The Second 70s Ribosome
          Length = 208

 Score =  214 bits (544), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 11/211 (5%)

Query: 3   KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           +      ++ RR G  L+ +      PK  +  R Y PG HGQ+R  +PS + ++LR KQ
Sbjct: 2   RYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQ 61

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG ISE++FR++F+EA + +G T    +  LESRLD +VYR  F  +   ARQ V
Sbjct: 62  KLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLV 120

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
            H H+ VNGR V++ SYR + GD I V +KS+ L  + +  + +  R V  ++S++ + M
Sbjct: 121 RHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGM 180

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F+R+P   +D+  PV     LV+EFYSR
Sbjct: 181 KGKFLRLPDR-EDLALPV--NEQLVIEFYSR 208


>gi|298500604|ref|ZP_07010408.1| SSU ribosomal protein S4 [Vibrio cholerae MAK 757]
 gi|297540773|gb|EFH76830.1| SSU ribosomal protein S4 [Vibrio cholerae MAK 757]
          Length = 206

 Score =  214 bits (544), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ + +   ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSRVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S+     DV+ V++K+K+ + +  A ++AE R+ P +I V+ + M
Sbjct: 119 SHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPTWIEVDVNTM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +   L+VE YS+
Sbjct: 179 EGTFKRMPERSD---LSADINEQLIVELYSK 206


>gi|114561360|ref|YP_748873.1| 30S ribosomal protein S4 [Shewanella frigidimarina NCIMB 400]
 gi|122301094|sp|Q089N0|RS4_SHEFN RecName: Full=30S ribosomal protein S4
 gi|114332653|gb|ABI70035.1| SSU ribosomal protein S4P [Shewanella frigidimarina NCIMB 400]
          Length = 206

 Score =  214 bits (544), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEVRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ V+VNGR VNI S++    DV+ +++KS+  A +  A ++A +R+ P ++ V++  M
Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAGQREKPTWVEVDNAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRVPERSD---LSADINEQLIVELYSK 206


>gi|196044058|ref|ZP_03111295.1| ribosomal protein S4 [Bacillus cereus 03BB108]
 gi|196025394|gb|EDX64064.1| ribosomal protein S4 [Bacillus cereus 03BB108]
 gi|324328549|gb|ADY23809.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 200

 Score =  214 bits (544), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERSE---LPAEINEALIVEFYSR 200


>gi|91216885|ref|ZP_01253849.1| 30S ribosomal protein S4 [Psychroflexus torquis ATCC 700755]
 gi|91185046|gb|EAS71425.1| 30S ribosomal protein S4 [Psychroflexus torquis ATCC 700755]
          Length = 201

 Score =  214 bits (544), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 123/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE+++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGESIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAVQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR++F +A+RS G T   L+   ESRLD + YR    PT   ARQ V+H+
Sbjct: 60  YTYG-ILEKQFRNMFSKANRSTGITGEILLQLCESRLDNVTYRLGIAPTRSGARQLVSHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ VNI SY+ K  DV+ +++KSK L  V E+     + V E+++ N + M  TF
Sbjct: 119 HITVNGQLVNIPSYQIKPNDVVSIREKSKSLNVVQESLS-NNKSVNEWMTWNSEKMQGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V++P   +    P  +    +VE YS+
Sbjct: 178 VKVPERSQ---IPEKINEQFIVELYSK 201


>gi|16803636|ref|NP_465121.1| 30S ribosomal protein S4 [Listeria monocytogenes EGD-e]
 gi|26399430|sp|Q8Y6T6|RS4_LISMO RecName: Full=30S ribosomal protein S4
 gi|16411025|emb|CAC99674.1| ribosomal protein S4 [Listeria monocytogenes EGD-e]
          Length = 200

 Score =  213 bits (543), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQ   KQK++ 
Sbjct: 1   MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ F +A + RG    N +  LE RLD IVYR     T  AARQ VNH H
Sbjct: 60  MYG-LTERQFKNTFNKAGKLRGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY+   G VI V++KS + +++ E+ +++   VPEY++ + + +  +  
Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAEKLTGSLN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200


>gi|304310039|ref|YP_003809637.1| 30S ribosomal protein S4 [gamma proteobacterium HdN1]
 gi|301795772|emb|CBL43971.1| 30S ribosomal protein S4 [gamma proteobacterium HdN1]
          Length = 206

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +               PG HG+ R+ + S +G QLR KQ
Sbjct: 1   MARYLGPKCKLSRREGVDLGLKSGVRAHESKCRSEKAPGQHGE-RRGRLSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I EK+FR  + EA R +G T  NL+  LESRLD +V+R  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILEKQFRGYYAEASRRKGSTGENLLQLLESRLDNVVFRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +L+NG++VNI SY+   GDV+ V++KSK    +  A +LAE R    +I V+    
Sbjct: 119 SHKAILINGKTVNIPSYQLAAGDVVSVREKSKSQLRIGAAQELAEQRGFAAWIEVDTKKR 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P     +  P  +  NL+VE YS+
Sbjct: 179 EGVFKSVPER---IDLPSDINENLIVELYSK 206


>gi|120597013|ref|YP_961587.1| 30S ribosomal protein S4 [Shewanella sp. W3-18-1]
 gi|146294817|ref|YP_001185241.1| 30S ribosomal protein S4 [Shewanella putrefaciens CN-32]
 gi|152112262|sp|A1RED8|RS4_SHESW RecName: Full=30S ribosomal protein S4
 gi|172046874|sp|A4YBV9|RS4_SHEPC RecName: Full=30S ribosomal protein S4
 gi|110812360|gb|ABG91716.1| ribosomal protein S4 [Shewanella putrefaciens 200]
 gi|120557106|gb|ABM23033.1| SSU ribosomal protein S4P [Shewanella sp. W3-18-1]
 gi|145566507|gb|ABP77442.1| SSU ribosomal protein S4P [Shewanella putrefaciens CN-32]
 gi|319424604|gb|ADV52678.1| ribosomal protein S4 [Shewanella putrefaciens 200]
          Length = 206

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL+  LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ V+VNGR VNI S++    DV+ +++KS+  A +  A +  A+R+ P ++ V+   M
Sbjct: 119 SHKSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDSAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRVPERSD---LSAEINEQLIVELYSK 206


>gi|260435631|ref|ZP_05789601.1| ribosomal protein S4 [Synechococcus sp. WH 8109]
 gi|260413505|gb|EEX06801.1| ribosomal protein S4 [Synechococcus sp. WH 8109]
          Length = 241

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 40  MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 96

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 97  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 155

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++++           +     +VP ++ ++   + A  
Sbjct: 156 VTVNGRVTDIASYQCKPGDVIAIRERKCSKKLAEANLEFPGLANVPSHLELDKSKLSAKV 215

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +     + +   LVVE+YSR
Sbjct: 216 TA---RCEREWVALEINELLVVEYYSR 239


>gi|163752892|ref|ZP_02160016.1| 30S ribosomal protein S4 [Kordia algicida OT-1]
 gi|161326624|gb|EDP97949.1| 30S ribosomal protein S4 [Kordia algicida OT-1]
          Length = 201

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR++F  A+RS+G T   L+   ESRLD +V+R    PT   ARQ V+HR
Sbjct: 60  YTYG-ILERQFRNLFDRANRSKGITGEVLLQLCESRLDNVVFRMGISPTRSGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDV+ V++KSK L  +  +   A   V E+I+ N +    T+
Sbjct: 119 HITVNGEQVNIPSYTLKAGDVVGVREKSKSLEVIERSLANASH-VYEWITWNGEKKEGTY 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V IP  L+    P  ++  L+VE YS+
Sbjct: 178 VSIPERLQ---IPENIKEQLIVELYSK 201


>gi|221310909|ref|ZP_03592756.1| 30S ribosomal protein S4 [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 200

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L    K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKLSRRLGISLSVTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  L+SRLD +VY+     T   ARQ VNH H
Sbjct: 60  MYG-VNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  V+I SY  K G  I V++KS+ L+ + E+ ++    VPEY++ + + +  TF 
Sbjct: 119 ILVDGSRVDIPSYLVKPGQTIGVREKSRNLSIIKESVEV-NNFVPEYLTFDAEKLEGTFT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VEFYSR
Sbjct: 178 RLPERSELAP---EINEALIVEFYSR 200


>gi|115350347|ref|YP_772186.1| 30S ribosomal protein S4 [Burkholderia ambifaria AMMD]
 gi|115280335|gb|ABI85852.1| SSU ribosomal protein S4P [Burkholderia ambifaria AMMD]
          Length = 213

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 15/213 (7%)

Query: 2   SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           ++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR 
Sbjct: 8   ARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGTQLRE 64

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   ARQ
Sbjct: 65  KQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESRLDNVVYRMGFGSTRAEARQ 123

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V+H+ + VNG   N+ S + K GD++ +++K+K+ A ++EA  LAE+  +P +++V+  
Sbjct: 124 LVSHKSITVNGVVANVPSQQVKAGDIVAIREKAKKQARIVEALSLAEQGGMPSWVAVDAK 183

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF ++P           +  +L+VE YSR
Sbjct: 184 KFEGTFKQMPERAD---IAGDINESLIVELYSR 213


>gi|26399364|sp|P59132|RS4_SHIFL RecName: Full=30S ribosomal protein S4
          Length = 206

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++V GR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVPGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R P           +  +L+VE YS+
Sbjct: 179 EGTFKRKPERSD---LSADINEHLIVELYSK 206


>gi|289665160|ref|ZP_06486741.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289669367|ref|ZP_06490442.1| 30S ribosomal protein S4 [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 208

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  +   PG HG  RK K S +  QLR
Sbjct: 1   MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGAARKGKLSDYATQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K+A   +G+T   L+  LE+RLD + YR  F  T  AAR
Sbjct: 58  EKQKVKRIYG-LLERQFRNYYKKASTKKGNTGEILLQLLETRLDNVCYRMGFAVTRPAAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVN 171
           Q V+HR VLVNG+SVN+ SY+ K GD I + +K+++   V EA  +AE+    P ++ V+
Sbjct: 117 QLVSHRGVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEALTVAEQHDMTPSWVEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  F  +P        P  +   L+VE YS+
Sbjct: 177 SKKFSGVFKAVPDRAD---LPSDINEALIVELYSK 208


>gi|289209305|ref|YP_003461371.1| ribosomal protein S4 [Thioalkalivibrio sp. K90mix]
 gi|288944936|gb|ADC72635.1| ribosomal protein S4 [Thioalkalivibrio sp. K90mix]
          Length = 206

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  + +   + T+      PG HG+ R+++ S + +QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGVDLGLKSRARALETKCKLDKAPGQHGE-RRTRLSDYAVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A + +G T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KLRRIYGVL-EKQFRNYYKKAAQRKGSTGENLLKLLEGRLDNVVYRMGFGSTRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR VLVNG+ VNI +Y+ +  DV+ +++K+++   + ++  LAE+   P ++ V+    
Sbjct: 119 SHRAVLVNGQVVNIAAYQVQPSDVVSIREKARKQVRIQDSMTLAEQSGFPSWVEVDTSKF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  IP        P  +  +LVVE YS+
Sbjct: 179 EGTFKAIPDRSD---LPADINESLVVELYSK 206


>gi|146281194|ref|YP_001171347.1| 30S ribosomal protein S4 [Pseudomonas stutzeri A1501]
 gi|172045574|sp|A4VHQ4|RS4_PSEU5 RecName: Full=30S ribosomal protein S4
 gi|145569399|gb|ABP78505.1| ribosomal protein S4 [Pseudomonas stutzeri A1501]
          Length = 206

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGARALESKCNIETPPGVHGQ-RRGRLSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +KEA   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKEAASRKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ K GDV+ V++K +    + +A +L A+R   E++ V+ D  
Sbjct: 119 SHKSITVNGQTVNIPSYQVKAGDVVAVREKCRNQLRIAQALELCAQRGRVEWVEVDADKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  NL+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206


>gi|121609261|ref|YP_997068.1| 30S ribosomal protein S4 [Verminephrobacter eiseniae EF01-2]
 gi|152112272|sp|A1WK93|RS4_VEREI RecName: Full=30S ribosomal protein S4
 gi|121553901|gb|ABM58050.1| SSU ribosomal protein S4P [Verminephrobacter eiseniae EF01-2]
          Length = 207

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        KS  +++   PG HG+   ++ S +GLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIADKSKFDSK---PGQHGRTSGARTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+ A+  +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFEAAESRKGNTGANLLFLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+SVNI SY  K GD++ V++KSK+   + EA QLA +  +P ++ VN 
Sbjct: 117 QLVSHKAITVNGQSVNIPSYLVKTGDLVAVREKSKKQGRIAEALQLATQVGMPAWVEVNT 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +     F + P   +   +   +  +L+VE YSR
Sbjct: 177 EKAEGLFKKAPDRDE---FGADINESLIVELYSR 207


>gi|226939211|ref|YP_002794282.1| 30S ribosomal protein S4 [Laribacter hongkongensis HLHK9]
 gi|254764593|sp|C1DAU2|RS4_LARHH RecName: Full=30S ribosomal protein S4
 gi|226714135|gb|ACO73273.1| RpsD [Laribacter hongkongensis HLHK9]
          Length = 206

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 125/214 (58%), Gaps = 16/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  +++R   PG HG  ++ + S +G+ LR
Sbjct: 1   MARYTGPKCKLARREGTDLFLKSARRSIDSKCKLDSR---PGQHGA-KQPRLSDYGIHLR 56

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+++ YG + E++FR  F EA+R +G T  NL+  LESRLD +VYR  +  T   +R
Sbjct: 57  EKQKIRRIYGVL-ERQFRKYFAEAERRKGSTGENLLQILESRLDNVVYRMGYGSTRAESR 115

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ ++VNG  VNI SY+ K GDV+ V++KSK+   + E+  LAE+   P ++SV+ 
Sbjct: 116 QLVSHKAIVVNGEVVNIPSYQVKAGDVVSVREKSKKQVRIAESLALAEQIGFPGWVSVDP 175

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF   P   +       +   LVVEFYS+
Sbjct: 176 KKMEGTFKNAPERSE---LSSDINEQLVVEFYSK 206


>gi|149926591|ref|ZP_01914851.1| 30S ribosomal protein S4 [Limnobacter sp. MED105]
 gi|149824520|gb|EDM83736.1| 30S ribosomal protein S4 [Limnobacter sp. MED105]
          Length = 207

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +  +  ++++      PG HG+   ++ S +G QLR KQ
Sbjct: 1   MARYTGPKCKLSRREGTDLSLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGQQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA R +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KVKRMYGVL-EKQFRRYFAEASRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ +LVNG++VNI SY  K  DVI +++KSK  A ++E+  LAE+   P +++V+   +
Sbjct: 120 SHKAILVNGKAVNIPSYSVKLNDVISIREKSKTQARIVESVTLAEQMGFPLWVNVDAKKL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +F  +P           +  +L+VE YSR
Sbjct: 180 EGSFKSVPERAD---LSQEINESLIVELYSR 207


>gi|258420636|ref|ZP_05683575.1| SSU ribosomal protein S4 [Staphylococcus aureus A9719]
 gi|257843240|gb|EEV67650.1| SSU ribosomal protein S4 [Staphylococcus aureus A9719]
          Length = 200

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K G  I V++KS++L  ++E+ ++    VPEY++ + D++  TFV
Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P   +    P  +   L+VE+YSR
Sbjct: 178 CLPERSE---LPAEINEQLIVEYYSR 200


>gi|59710868|ref|YP_203644.1| 30S ribosomal protein S4 [Vibrio fischeri ES114]
 gi|197334188|ref|YP_002155020.1| ribosomal protein S4 [Vibrio fischeri MJ11]
 gi|75507103|sp|Q5E890|RS4_VIBF1 RecName: Full=30S ribosomal protein S4
 gi|226695098|sp|B5FGE0|RS4_VIBFM RecName: Full=30S ribosomal protein S4
 gi|59478969|gb|AAW84756.1| 30S ribosomal subunit protein S4 [Vibrio fischeri ES114]
 gi|197315678|gb|ACH65125.1| ribosomal protein S4 [Vibrio fischeri MJ11]
          Length = 206

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKDAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+KQ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKSILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206


>gi|223043626|ref|ZP_03613671.1| ribosomal protein S4 [Staphylococcus capitis SK14]
 gi|222443114|gb|EEE49214.1| ribosomal protein S4 [Staphylococcus capitis SK14]
          Length = 200

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F+ A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFEIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + D++  TFV
Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLNIIKESVEI-NNFVPEYLDFDADSLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|46907827|ref|YP_014216.1| 30S ribosomal protein S4 [Listeria monocytogenes str. 4b F2365]
 gi|61215605|sp|Q71Z71|RS4_LISMF RecName: Full=30S ribosomal protein S4
 gi|46881096|gb|AAT04393.1| ribosomal protein S4 [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 200

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQ   KQK++ 
Sbjct: 1   MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ F +A + +G    N +  LE RLD IVYR     T  AARQ VNH H
Sbjct: 60  MYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY+   G VI V++KS + +++ E+ +++   VPEY++ + + +  +  
Sbjct: 119 ITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF-VPEYVTFDAETLTGSLN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 178 RLPERSER---AAEINEAFIVEFYSR 200


>gi|298370567|ref|ZP_06981882.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281177|gb|EFI22667.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 206

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EA R +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEAARRKGSTGELLLQLLESRLDNVVYRLGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + VNG+ VNI SY+ K GD+I V++K+K+   + EA  LA +  +P ++SV+ + +
Sbjct: 119 SHKAITVNGQVVNIPSYQVKAGDIIAVREKAKKQVRIQEALNLATQIGLPSWVSVDTNKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LSSDINEQLVVEFYSK 206


>gi|224476810|ref|YP_002634416.1| 30S ribosomal protein S4 [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254764610|sp|B9DN91|RS4_STACT RecName: Full=30S ribosomal protein S4
 gi|222421417|emb|CAL28231.1| 30S ribosomal protein S4 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 201

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 6/205 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S + +QLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYAIQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E++F + F EA +  G    N +  L  RLD +VY      T   ARQ V H H
Sbjct: 60  LYG-ITERQFHNTFIEAGKQSGVHGENFMRLLARRLDAVVYALGLARTRRQARQLVGHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G V+ V++KS++L  + E+ ++    VPEY+  + + +  TFV
Sbjct: 119 IEVDGKRVNIPSYTLKPGQVVSVREKSQKLDIIQESVEI-NNFVPEYLDFDEEKLSGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           R+P   +    P  +   L+VE+YS
Sbjct: 178 RVPERSE---LPAEINEQLIVEYYS 199


>gi|296313389|ref|ZP_06863330.1| ribosomal protein S4 [Neisseria polysaccharea ATCC 43768]
 gi|296840099|gb|EFH24037.1| ribosomal protein S4 [Neisseria polysaccharea ATCC 43768]
          Length = 206

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P ++SV+ D +
Sbjct: 119 SHKAIAVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206


>gi|314933871|ref|ZP_07841236.1| ribosomal protein S4 [Staphylococcus caprae C87]
 gi|313654021|gb|EFS17778.1| ribosomal protein S4 [Staphylococcus caprae C87]
          Length = 200

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F+ A +  G    N +  L SRLD +V+      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFEIAGKQYGVHGENFMILLASRLDAVVFSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + D++  TFV
Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLNIIKESVEI-NNFVPEYLDFDADSLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|221142354|ref|ZP_03566847.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|302751546|gb|ADL65723.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 200

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHSH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K G  I V++KS++L  ++E+ ++    VPEY++ + D++  TFV
Sbjct: 119 ILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200


>gi|218899810|ref|YP_002448221.1| ribosomal protein S4 [Bacillus cereus G9842]
 gi|228903174|ref|ZP_04067308.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 4222]
 gi|228967755|ref|ZP_04128771.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229163648|ref|ZP_04291596.1| 30S ribosomal protein S4 [Bacillus cereus R309803]
 gi|226697801|sp|B7IKS0|RS4_BACC2 RecName: Full=30S ribosomal protein S4
 gi|218544223|gb|ACK96617.1| ribosomal protein S4 [Bacillus cereus G9842]
 gi|228619785|gb|EEK76663.1| 30S ribosomal protein S4 [Bacillus cereus R309803]
 gi|228791909|gb|EEM39495.1| 30S ribosomal protein S4 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856456|gb|EEN00982.1| 30S ribosomal protein S4 [Bacillus thuringiensis IBL 4222]
          Length = 200

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K    I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPNQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +    P  +   L+VEFYSR
Sbjct: 178 RHAERAE---LPAEINEALIVEFYSR 200


>gi|325272032|ref|ZP_08138475.1| 30S ribosomal protein S4 [Pseudomonas sp. TJI-51]
 gi|324102836|gb|EGC00240.1| 30S ribosomal protein S4 [Pseudomonas sp. TJI-51]
          Length = 206

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++ A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ + GDV+ V++KS     +++A +L A+R   E++ V+    
Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSLSQLRIVQALELCAQRGRVEWVDVDAAKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  NL+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206


>gi|332042696|gb|EGI78896.1| ribosomal protein S4 [Lacinutrix algicola 5H-3-7-4]
          Length = 201

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  K     R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDK-AFEKRNYPPGQHGNNRRRGKKSEYAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR++FK A  + G T   L+   ESRLD +V+R    PT  AARQ V+HR
Sbjct: 60  YTYG-ILEKQFRNMFKRATAAPGITGEVLLQLCESRLDNVVFRMGIAPTRSAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VN+ SY+ K GDV+ V++KSK L ++  +   +  +V E+I+ N +    T+
Sbjct: 119 HITVNGELVNVPSYQLKAGDVVAVREKSKSLEAIERSLSNSS-NVFEWITWNTETKQGTY 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P+    +  P  +    +VE YS+
Sbjct: 178 VSVPAR---IQIPENINEQFIVELYSK 201


>gi|242374009|ref|ZP_04819583.1| 30S ribosomal protein S4 [Staphylococcus epidermidis M23864:W1]
 gi|242348260|gb|EES39862.1| 30S ribosomal protein S4 [Staphylococcus epidermidis M23864:W1]
          Length = 200

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SY  K G VI V++KS+ L  + E+ ++    VPEY+  + D++  TFV
Sbjct: 119 IEVDGGRVDIPSYSLKPGQVITVREKSQNLNIIKESVEI-NNYVPEYLDFDADSLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|325294423|ref|YP_004280937.1| ribosomal protein S4 [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064871|gb|ADY72878.1| ribosomal protein S4 [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 208

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 128/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLW------GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +    K +I RR+G N++       + KS ++ R Y PG HG+ R+ K SY+G QL  
Sbjct: 1   MGRYTGPKWRIARRLGVNIYVGEEKSQKGKSILDRRPYPPGQHGRSRR-KISYYGRQLME 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K YYG I E +F+  ++ A+R RG T  NL+  LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQKVKYYYG-IREGQFKRFYEMAERMRGQTGENLLKLLESRLDNVVYRLGFGKSHRHARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+LVNG+ V+  SY  K GD++EVK+KS+++  + E  +LA+ R +P ++ ++ +
Sbjct: 119 LVVHGHILVNGKKVDRPSYLVKPGDIVEVKEKSREIPQIKEGIELAQRRGIPSWLELDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N        P+  +     + ++ +L+VE YS+
Sbjct: 179 NFKGVVKAEPTREE---IEIPVEEHLIVELYSK 208


>gi|302344330|ref|YP_003808859.1| ribosomal protein S4 [Desulfarculus baarsii DSM 2075]
 gi|301640943|gb|ADK86265.1| ribosomal protein S4 [Desulfarculus baarsii DSM 2075]
          Length = 209

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR  + L+ +       K  V  R+Y PG HGQ R+ K S +G+QLR 
Sbjct: 1   MARYRGSVCRLCRREMQKLYLKGDRCYGDKCAVERRTYPPGQHGQGRRGKASDYGIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG ++E +FR  +K A    G T HNL+  LE RLD +V+R  F  +   ARQ
Sbjct: 61  KQKVKRMYG-LAENQFRLTYKRASSMHGVTGHNLLQLLERRLDNVVFRLGFANSRTQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
           +V H H  VNG  VNI S   K GDV+ V Q S++L  + EA +  A R +P ++ ++  
Sbjct: 120 WVRHSHFTVNGHKVNIPSALVKAGDVVAVVQTSRELGQLKEAMEAVARRTIPGWLELDVK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++  T   +P+  +     + MQ  L+VE YSR
Sbjct: 180 DLSGTVKALPTREE---LTMPMQEQLIVELYSR 209


>gi|313887042|ref|ZP_07820741.1| ribosomal protein S4 [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923453|gb|EFR34263.1| ribosomal protein S4 [Porphyromonas asaccharolytica PR426713P-I]
 gi|332176607|gb|AEE12297.1| ribosomal protein S4 [Porphyromonas asaccharolytica DSM 20707]
          Length = 201

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE ++G  K  ++ +SY PG HG  R+ K S + LQLR KQ  K 
Sbjct: 1   MARYIGPKSKIARKFGEPIFGADK-VLSKKSYPPGQHGNSRRRKQSEYALQLREKQMAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A RS G T   L+  LESRLD +V+R    PT  AARQ V+HRH
Sbjct: 60  TYGVL-ERQFRNLFEKAQRSSGITGEVLLQLLESRLDNVVFRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SY  K G +I V+++ K +  + ++          ++  +        +
Sbjct: 119 IVVDGEVVNIPSYTLKPGQIIGVRERDKSMEVIADSLAGYNHSKYPWLEWDGRTYSGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+  +    P  ++  L+VE YS+
Sbjct: 179 NVPTREE---IPEPIKEQLIVELYSK 201


>gi|285017343|ref|YP_003375054.1| 30s ribosomal protein s4 [Xanthomonas albilineans GPE PC73]
 gi|283472561|emb|CBA15066.1| probable 30s ribosomal protein s4 [Xanthomonas albilineans]
          Length = 209

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 17/216 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQR-RKSKPSYFGLQL 52
           M++      K+ RR G +L  +        K  +  +   PG HG   RK K S +  QL
Sbjct: 1   MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGATARKGKLSDYATQL 57

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
           R KQK+K+ Y  + E++FR+ +K+A   +G+T  NL+  LE+RLD +VYR  F  T  AA
Sbjct: 58  REKQKVKRIYC-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPAA 116

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISV 170
           RQ V+HR VLVNG+SVN+ SY+ K GD I + +K+++   V EA  +A+     P ++ V
Sbjct: 117 RQLVSHRGVLVNGKSVNLASYQVKAGDAIALSEKAQKQLRVQEALSVADTHDLTPSWVEV 176

Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +       F  +P        P  +   L+VE YS+
Sbjct: 177 DSKKFSGIFKAVPDRAD---LPADINEALIVELYSK 209


>gi|325203287|gb|ADY98740.1| ribosomal protein S4 [Neisseria meningitidis M01-240355]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K++ S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKTRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P ++SV+ D +
Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206


>gi|86148804|ref|ZP_01067071.1| 30S ribosomal protein S4 [Vibrio sp. MED222]
 gi|148982227|ref|ZP_01816653.1| 30S ribosomal protein S4 [Vibrionales bacterium SWAT-3]
 gi|218710725|ref|YP_002418346.1| 30S ribosomal protein S4 [Vibrio splendidus LGP32]
 gi|254764622|sp|B7VLD3|RS4_VIBSL RecName: Full=30S ribosomal protein S4
 gi|85833394|gb|EAQ51585.1| 30S ribosomal protein S4 [Vibrio sp. MED222]
 gi|145960589|gb|EDK25942.1| 30S ribosomal protein S4 [Vibrionales bacterium SWAT-3]
 gi|218323744|emb|CAV20098.1| ribosomal protein S4 [Vibrio splendidus LGP32]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+KQ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKSILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRMPERSD---LSADINEHLIVELYSK 206


>gi|150003363|ref|YP_001298107.1| 30S ribosomal protein S4 [Bacteroides vulgatus ATCC 8482]
 gi|212695280|ref|ZP_03303408.1| hypothetical protein BACDOR_04820 [Bacteroides dorei DSM 17855]
 gi|237711700|ref|ZP_04542181.1| 30S ribosomal protein S4 [Bacteroides sp. 9_1_42FAA]
 gi|237725859|ref|ZP_04556340.1| 30S ribosomal protein S4 [Bacteroides sp. D4]
 gi|265753119|ref|ZP_06088688.1| 30S ribosomal protein S4 [Bacteroides sp. 3_1_33FAA]
 gi|294777845|ref|ZP_06743289.1| ribosomal protein S4 [Bacteroides vulgatus PC510]
 gi|172048640|sp|A6KYH1|RS4_BACV8 RecName: Full=30S ribosomal protein S4
 gi|149931787|gb|ABR38485.1| 30S ribosomal protein S4 [Bacteroides vulgatus ATCC 8482]
 gi|212662190|gb|EEB22764.1| hypothetical protein BACDOR_04820 [Bacteroides dorei DSM 17855]
 gi|229435667|gb|EEO45744.1| 30S ribosomal protein S4 [Bacteroides dorei 5_1_36/D4]
 gi|229454395|gb|EEO60116.1| 30S ribosomal protein S4 [Bacteroides sp. 9_1_42FAA]
 gi|263236305|gb|EEZ21800.1| 30S ribosomal protein S4 [Bacteroides sp. 3_1_33FAA]
 gi|294448299|gb|EFG16855.1| ribosomal protein S4 [Bacteroides vulgatus PC510]
          Length = 201

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  + G T   L+  LE+RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAASANGITGEILLQSLEARLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI S+  K G ++ V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGKVVNIPSFSVKPGQIVGVRERSKSLEVIANSLAGFNHSKYPWLEWDESSKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|50086191|ref|YP_047701.1| 30S ribosomal protein S4 [Acinetobacter sp. ADP1]
 gi|61215531|sp|Q6F7T6|RS4_ACIAD RecName: Full=30S ribosomal protein S4
 gi|49532167|emb|CAG69879.1| 30S ribosomal protein S4 [Acinetobacter sp. ADP1]
          Length = 207

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPV----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P        +  PG HGQ R  +  Y  LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHAKAPGQHGQARGKQSEY-SLQLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 60  QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 118

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +L A+R +P ++ V+H  
Sbjct: 119 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWMDVDHSK 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 179 LEGTFKAAPDRSD---LPAEINESLIVELYSK 207


>gi|89093591|ref|ZP_01166539.1| 30S ribosomal protein S4 [Oceanospirillum sp. MED92]
 gi|89082281|gb|EAR61505.1| 30S ribosomal protein S4 [Oceanospirillum sp. MED92]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG+HG  R+ + S +GLQLR KQ
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGVRALDSKCKAETVPGVHGA-RRGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FRS +KEA R  G T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-ERQFRSYYKEAARRSGATGENLLQLLEGRLDNVVYRMGFGSTRAEARQIV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +HR + VNG+ VNI SY+ K GDV+ V++K+K    +  A +LA +R   E++ V+   M
Sbjct: 119 SHRSITVNGQVVNIASYQVKAGDVVAVREKAKTQLRIKNALELAGQRAAVEWVEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+   P           +   L+VE YS+
Sbjct: 179 EGTYKATPERSD---LSADINEQLIVELYSK 206


>gi|189460709|ref|ZP_03009494.1| hypothetical protein BACCOP_01356 [Bacteroides coprocola DSM 17136]
 gi|189432668|gb|EDV01653.1| hypothetical protein BACCOP_01356 [Bacteroides coprocola DSM 17136]
          Length = 201

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNTRRRKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A    G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNMFEKAASMNGITGEILLQSLECRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G ++ V++KSK L  V  +          ++  + ++     +
Sbjct: 119 ITVDGQVVNIPSYSVKPGQLVGVREKSKSLEVVANSLAGFNHSKYPWLEWDENSKTGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++ +L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEHLIVELYSK 201


>gi|187930339|ref|YP_001900826.1| 30S ribosomal protein S4 [Ralstonia pickettii 12J]
 gi|226699109|sp|B2UEJ4|RS4_RALPJ RecName: Full=30S ribosomal protein S4
 gi|187727229|gb|ACD28394.1| ribosomal protein S4 [Ralstonia pickettii 12J]
          Length = 207

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ +LVNG+++N+ S + K GDVI +++KSK+   + E+  LAE+   P +++V+ 
Sbjct: 117 QLVSHKAILVNGQALNVPSAQVKSGDVIAIREKSKKQVRIAESLTLAEQSGFPIWVAVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M  TF + P           +  +L+VE YSR
Sbjct: 177 KKMEGTFKQAPDRAD---IAGDINESLIVELYSR 207


>gi|254495366|ref|ZP_05108290.1| 30S ribosomal protein S4 [Polaribacter sp. MED152]
 gi|85819720|gb|EAQ40877.1| 30S ribosomal protein S4 [Polaribacter sp. MED152]
          Length = 201

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 125/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  K+    R++ PG HG  RR+ K S +  QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGEDKN-FEKRNFPPGQHGNARRRGKKSEYATQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++F ++FK+A  S+G T   L+   ESRLD +VYR     +   ARQ V+HR
Sbjct: 60  YTYG-ILERQFSNLFKKASASQGITGEILLQLCESRLDNVVYRMGVSNSRSGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  KEGDV+ V++KSK L ++ +A   +  +V E+++ N+D    TF
Sbjct: 119 HITVNGEIVNIPSYSLKEGDVVAVREKSKSLVAIEDALA-SNNNVFEWLTWNNDTKSGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V++P  L+    P  ++  L+VE YS+
Sbjct: 178 VKVPERLQ---IPENIKEQLIVELYSK 201


>gi|88799195|ref|ZP_01114775.1| ribosomal protein S4 [Reinekea sp. MED297]
 gi|88778178|gb|EAR09373.1| ribosomal protein S4 [Reinekea sp. MED297]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG+HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALDSKCKLETVPGVHGA-RRGRLSDYGIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R++G T   L+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRTYGVL-EKQFRNYYKEAARTKGATGEVLLQLLERRLDNVVYRMGFGVTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
           +H+ +LVNG+SVNI S++ K GDV+ V++KS     +  A  +A    P  ++ V+   +
Sbjct: 119 SHKAILVNGQSVNIPSFQVKPGDVVSVREKSANQLRIKSAVDVAATRAPVSWVEVDAKKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P           +  NL+VE YS+
Sbjct: 179 EGKFSAVPERSD---LSQDINENLIVELYSK 206


>gi|15676094|ref|NP_273225.1| 30S ribosomal protein S4 [Neisseria meningitidis MC58]
 gi|59802136|ref|YP_208848.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA 1090]
 gi|121634041|ref|YP_974286.1| 30S ribosomal protein S4 [Neisseria meningitidis FAM18]
 gi|161870895|ref|YP_001600070.1| 30S ribosomal protein S4 [Neisseria meningitidis 053442]
 gi|218767143|ref|YP_002341655.1| 30S ribosomal protein S4 [Neisseria meningitidis Z2491]
 gi|239997950|ref|ZP_04717874.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 35/02]
 gi|240015072|ref|ZP_04721985.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI18]
 gi|240017521|ref|ZP_04724061.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA6140]
 gi|240081664|ref|ZP_04726207.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA19]
 gi|240113942|ref|ZP_04728432.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae MS11]
 gi|240116676|ref|ZP_04730738.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID18]
 gi|240118898|ref|ZP_04732960.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID1]
 gi|240122144|ref|ZP_04735106.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID24-1]
 gi|240124436|ref|ZP_04737392.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID332]
 gi|240124695|ref|ZP_04737581.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-92-679]
 gi|240129112|ref|ZP_04741773.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494697|ref|ZP_05107868.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 1291]
 gi|254805789|ref|YP_003084010.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha14]
 gi|260439565|ref|ZP_05793381.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI2]
 gi|268593800|ref|ZP_06127967.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 35/02]
 gi|268597761|ref|ZP_06131928.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA19]
 gi|268600006|ref|ZP_06134173.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae MS11]
 gi|268602343|ref|ZP_06136510.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID18]
 gi|268604607|ref|ZP_06138774.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID1]
 gi|268683064|ref|ZP_06149926.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID332]
 gi|268683269|ref|ZP_06150131.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-92-679]
 gi|268687494|ref|ZP_06154356.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-93-1035]
 gi|291042801|ref|ZP_06568542.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI2]
 gi|293398178|ref|ZP_06642383.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae F62]
 gi|304388967|ref|ZP_07371014.1| 30S ribosomal protein S4 [Neisseria meningitidis ATCC 13091]
 gi|54039509|sp|P66561|RS4_NEIMB RecName: Full=30S ribosomal protein S4
 gi|54041962|sp|P66560|RS4_NEIMA RecName: Full=30S ribosomal protein S4
 gi|75507306|sp|Q5F5V1|RS4_NEIG1 RecName: Full=30S ribosomal protein S4
 gi|152112237|sp|A1KRJ8|RS4_NEIMF RecName: Full=30S ribosomal protein S4
 gi|189045388|sp|A9M3U1|RS4_NEIM0 RecName: Full=30S ribosomal protein S4
 gi|7225385|gb|AAF40624.1| 30S ribosomal protein S4 [Neisseria meningitidis MC58]
 gi|59719031|gb|AAW90436.1| putative 30S ribosomal protein S4 [Neisseria gonorrhoeae FA 1090]
 gi|120865747|emb|CAM09476.1| 30S ribosomal protein S4 [Neisseria meningitidis FAM18]
 gi|121051151|emb|CAM07422.1| 30S ribosomal protein S4 [Neisseria meningitidis Z2491]
 gi|161596448|gb|ABX74108.1| 30S ribosomal protein S4 [Neisseria meningitidis 053442]
 gi|226513737|gb|EEH63082.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 1291]
 gi|254669331|emb|CBA08372.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha14]
 gi|254670762|emb|CBA07036.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha153]
 gi|254672692|emb|CBA06587.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha275]
 gi|261391703|emb|CAX49152.1| 30S ribosomal protein S4 [Neisseria meningitidis 8013]
 gi|268547189|gb|EEZ42607.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae 35/02]
 gi|268551549|gb|EEZ46568.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae FA19]
 gi|268584137|gb|EEZ48813.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae MS11]
 gi|268586474|gb|EEZ51150.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID18]
 gi|268588738|gb|EEZ53414.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID1]
 gi|268623348|gb|EEZ55748.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae PID332]
 gi|268623553|gb|EEZ55953.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-92-679]
 gi|268627778|gb|EEZ60178.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae SK-93-1035]
 gi|291013235|gb|EFE05201.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae DGI2]
 gi|291611441|gb|EFF40511.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae F62]
 gi|304337101|gb|EFM03288.1| 30S ribosomal protein S4 [Neisseria meningitidis ATCC 13091]
 gi|308388383|gb|ADO30703.1| 30S ribosomal protein S4 [Neisseria meningitidis alpha710]
 gi|319411349|emb|CBY91760.1| 30S ribosomal protein S4 [Neisseria meningitidis WUE 2594]
 gi|325129086|gb|EGC51935.1| ribosomal protein S4 [Neisseria meningitidis N1568]
 gi|325131057|gb|EGC53781.1| ribosomal protein S4 [Neisseria meningitidis OX99.30304]
 gi|325133079|gb|EGC55751.1| ribosomal protein S4 [Neisseria meningitidis M6190]
 gi|325135173|gb|EGC57799.1| ribosomal protein S4 [Neisseria meningitidis M13399]
 gi|325137225|gb|EGC59820.1| ribosomal protein S4 [Neisseria meningitidis M0579]
 gi|325139057|gb|EGC61603.1| ribosomal protein S4 [Neisseria meningitidis ES14902]
 gi|325141180|gb|EGC63680.1| ribosomal protein S4 [Neisseria meningitidis CU385]
 gi|325143257|gb|EGC65596.1| ribosomal protein S4 [Neisseria meningitidis 961-5945]
 gi|325145364|gb|EGC67641.1| ribosomal protein S4 [Neisseria meningitidis M01-240013]
 gi|325197454|gb|ADY92910.1| ribosomal protein S4 [Neisseria meningitidis G2136]
 gi|325199380|gb|ADY94835.1| ribosomal protein S4 [Neisseria meningitidis H44/76]
 gi|325202998|gb|ADY98452.1| ribosomal protein S4 [Neisseria meningitidis M01-240149]
 gi|325205260|gb|ADZ00713.1| ribosomal protein S4 [Neisseria meningitidis M04-240196]
 gi|325207204|gb|ADZ02656.1| ribosomal protein S4 [Neisseria meningitidis NZ-05/33]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P ++SV+ D +
Sbjct: 119 SHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206


>gi|303256474|ref|ZP_07342488.1| ribosomal protein S4 [Burkholderiales bacterium 1_1_47]
 gi|331000668|ref|ZP_08324321.1| ribosomal protein S4 [Parasutterella excrementihominis YIT 11859]
 gi|302859965|gb|EFL83042.1| ribosomal protein S4 [Burkholderiales bacterium 1_1_47]
 gi|329570880|gb|EGG52591.1| ribosomal protein S4 [Parasutterella excrementihominis YIT 11859]
          Length = 207

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +      +++      PG HG+   ++ S +G QLR KQ
Sbjct: 1   MARYTGPKEKLARREGCDLNLKSAVRSFDSKCKSESAPGQHGRTSGARLSDYGAQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + E++FR  F +A R RG+T   L+S LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KVKRMYGVL-ERQFRLYFAKAARKRGNTGEQLLSLLESRLDNVVYRMGFGCTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175
           +H  + VNG  VNI SY  K GDVI V++K+K    + E+ +LAE + +P+++SV+   +
Sbjct: 120 SHCAISVNGNKVNIPSYSVKAGDVIAVREKAKNQVRIAESLKLAESNGLPDWVSVDTKKL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P+  +  P    +  +L+VE YSR
Sbjct: 180 EGTFKNVPARDEICP---DVNESLIVELYSR 207


>gi|291286338|ref|YP_003503154.1| 30S ribosomal protein S4 [Denitrovibrio acetiphilus DSM 12809]
 gi|290883498|gb|ADD67198.1| ribosomal protein S4 [Denitrovibrio acetiphilus DSM 12809]
          Length = 208

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR G  L+ +       K     + Y PG HGQ RK K S FG QLR 
Sbjct: 1   MARYTGAVCKLCRREGMKLFLKGERCYKDKCGFEKKPYPPGQHGQGRK-KISDFGTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR  F +A R  G T  NL+  LE RLD IVYRA F  +   ARQ
Sbjct: 60  KQKVKRLYGVL-EKQFRRYFDKATRMDGITGENLLQLLERRLDNIVYRAGFAGSRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H L++G+ V+I S+  K G VIEV++KS+ ++   +    AE R V +++++   
Sbjct: 119 MVKHSHFLIDGKKVDIPSFLVKPGMVIEVREKSQNVSRFKDCLDTAEGRGVSDWLALEKS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N  A   R+P           +Q +L+VE YS+
Sbjct: 179 NFKAVVNRLPERDD---IGYDIQEHLIVELYSK 208


>gi|229019885|ref|ZP_04176683.1| 30S ribosomal protein S4 [Bacillus cereus AH1273]
 gi|229026111|ref|ZP_04182488.1| 30S ribosomal protein S4 [Bacillus cereus AH1272]
 gi|229032307|ref|ZP_04188280.1| 30S ribosomal protein S4 [Bacillus cereus AH1271]
 gi|229175366|ref|ZP_04302881.1| 30S ribosomal protein S4 [Bacillus cereus MM3]
 gi|228608198|gb|EEK65505.1| 30S ribosomal protein S4 [Bacillus cereus MM3]
 gi|228729087|gb|EEL80090.1| 30S ribosomal protein S4 [Bacillus cereus AH1271]
 gi|228735189|gb|EEL85807.1| 30S ribosomal protein S4 [Bacillus cereus AH1272]
 gi|228741405|gb|EEL91607.1| 30S ribosomal protein S4 [Bacillus cereus AH1273]
          Length = 200

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 ITVDGSRVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +       +   L+VEFYSR
Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200


>gi|88803725|ref|ZP_01119249.1| 30S ribosomal protein S4 [Polaribacter irgensii 23-P]
 gi|88780458|gb|EAR11639.1| 30S ribosomal protein S4 [Polaribacter irgensii 23-P]
          Length = 201

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  K+    R+Y PG HG  RR+ K S +  QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGEDKN-FEKRNYPPGQHGNARRRGKKSEYATQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++F ++FK+A  S+G T   L+   ESRLD +VYR     +   ARQ V+HR
Sbjct: 60  YTYG-ILERQFSNLFKKASASQGITGEILVQLCESRLDNVVYRMGVSTSRSGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VN+ SY   EGDV+ V++KSK + ++ ++   +  +V E+++ N D    TF
Sbjct: 119 HITVNGEIVNVPSYNLLEGDVVAVREKSKSIQAIEDSLA-SNSNVYEWLTWNSDKKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V++P+ L+    P  ++  L+VE YS+
Sbjct: 178 VKVPARLQ---IPENIKEQLIVELYSK 201


>gi|209693947|ref|YP_002261875.1| 30S ribosomal protein S4 [Aliivibrio salmonicida LFI1238]
 gi|226697795|sp|B6EPU8|RS4_ALISL RecName: Full=30S ribosomal protein S4
 gi|208007898|emb|CAQ78028.1| 30S ribosomal protein S4 [Aliivibrio salmonicida LFI1238]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKDAARIKGNTGENLLQLLEGRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG+ VN+ S++    DV+ +++K+K  + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKSILVNGKVVNVPSFKVSANDVVSIREKAKLQSRIKAALEVAEQREKPTWIEVDAGKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRLPERSD---LSADINEHLIVELYSK 206


>gi|170723882|ref|YP_001751570.1| 30S ribosomal protein S4 [Pseudomonas putida W619]
 gi|226699108|sp|B1JAI8|RS4_PSEPW RecName: Full=30S ribosomal protein S4
 gi|169761885|gb|ACA75201.1| ribosomal protein S4 [Pseudomonas putida W619]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++ A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ + GDV+ V++KS     +++A +L A+R   E++ V+    
Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSSNQLRIVQALELCAQRGRVEWVDVDSAKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  NL+VE YS+
Sbjct: 179 SGVFKNVPARGD---LSADINENLIVELYSK 206


>gi|91791563|ref|YP_561214.1| 30S ribosomal protein S4 [Shewanella denitrificans OS217]
 gi|123166579|sp|Q12ST5|RS4_SHEDO RecName: Full=30S ribosomal protein S4
 gi|91713565|gb|ABE53491.1| SSU ribosomal protein S4P [Shewanella denitrificans OS217]
          Length = 206

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +G QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKPRLSEYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           +H+ VLVNGR VNI S++    DV+ +++KS+  A +  + +  A+R+ P ++ V++  M
Sbjct: 119 SHKTVLVNGRVVNIPSFKVSANDVVSIREKSRTQARIKASLEVAAQREKPTWVEVDNTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSADINEQLIVELYSK 206


>gi|220930992|ref|YP_002507900.1| ribosomal protein S4 [Halothermothrix orenii H 168]
 gi|254764592|sp|B8D0T6|RS4_HALOH RecName: Full=30S ribosomal protein S4
 gi|219992302|gb|ACL68905.1| ribosomal protein S4 [Halothermothrix orenii H 168]
          Length = 208

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++ +    ++ RR GE L+ +       K  ++ RSY PG HG RR++KP+ +G+QLR 
Sbjct: 1   MARYKGPVCRLCRREGEKLYLKGQRCYTDKCAIDRRSYPPGEHG-RRRNKPTEYGMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG I EK+F+  F  A++  G T  N +S LE RLD +VYR     +   ARQ
Sbjct: 60  KQKVKRIYG-ILEKQFKRYFDMAEKMPGVTGENFLSILERRLDNVVYRLGLATSRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
           FV H H+LVNGR VNI SY   EGDVI VK  S++     E  +  E    P+++SVN +
Sbjct: 119 FVLHGHILVNGRKVNIPSYLVDEGDVISVKDSSRKSKRFKEVFEFNEDLTPPKWLSVNLE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 V +P+  +D+ YPV  + +L+VEFYSR
Sbjct: 179 KAEGKVVAMPTR-EDIDYPV--EEHLIVEFYSR 208


>gi|84394604|ref|ZP_00993306.1| 30S ribosomal protein S4 [Vibrio splendidus 12B01]
 gi|84374778|gb|EAP91723.1| 30S ribosomal protein S4 [Vibrio splendidus 12B01]
          Length = 206

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ VLVNG+ VN+ S++    DV+ +++K+KQ + +  A ++AE R+ P +I V+   M
Sbjct: 119 SHKSVLVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDASKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF R+P           +  +L+VE YS+
Sbjct: 179 EGTFKRMPERSD---LSADINEHLIVELYSK 206


>gi|229076157|ref|ZP_04209125.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-18]
 gi|229099115|ref|ZP_04230049.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-29]
 gi|229105283|ref|ZP_04235932.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-28]
 gi|229118145|ref|ZP_04247504.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-3]
 gi|228665368|gb|EEL20851.1| 30S ribosomal protein S4 [Bacillus cereus Rock1-3]
 gi|228678209|gb|EEL32437.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-28]
 gi|228684343|gb|EEL38287.1| 30S ribosomal protein S4 [Bacillus cereus Rock3-29]
 gi|228707020|gb|EEL59225.1| 30S ribosomal protein S4 [Bacillus cereus Rock4-18]
          Length = 200

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +       +   L+VEFYSR
Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200


>gi|54778757|gb|AAV39591.1| ribosomal protein S4 [synthetic construct]
          Length = 233

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 126/210 (60%), Gaps = 10/210 (4%)

Query: 2   SKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQK 57
           ++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK
Sbjct: 26  ARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQK 84

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+
Sbjct: 85  VRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVS 143

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMV 176
           H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M 
Sbjct: 144 HKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKME 203

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            TF R P           +  +L+VE YS+
Sbjct: 204 GTFKRKPERSD---LSADINEHLIVELYSK 230


>gi|254881348|ref|ZP_05254058.1| 30S ribosomal protein S4 [Bacteroides sp. 4_3_47FAA]
 gi|319640349|ref|ZP_07995074.1| hypothetical protein HMPREF9011_00671 [Bacteroides sp. 3_1_40A]
 gi|254834141|gb|EET14450.1| 30S ribosomal protein S4 [Bacteroides sp. 4_3_47FAA]
 gi|317388124|gb|EFV68978.1| hypothetical protein HMPREF9011_00671 [Bacteroides sp. 3_1_40A]
          Length = 201

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYTGPKSRIARKFGEGIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  + G T   L+  LE+RLD +V+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAASANGITGEILLQSLEARLDNVVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI S+  K G ++ V+++SK L  +  +          ++  +  + V   +
Sbjct: 119 ITVDGKVVNIPSFSVKPGQIVGVRERSKSLEVIANSLAGFNHSKYPWLEWDETSKVGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP        P  ++ +L+VE YS+
Sbjct: 179 HIPERAD---IPENIKEHLIVELYSK 201


>gi|261400076|ref|ZP_05986201.1| ribosomal protein S4 [Neisseria lactamica ATCC 23970]
 gi|313667465|ref|YP_004047749.1| 30S ribosomal protein S4 [Neisseria lactamica ST-640]
 gi|269210301|gb|EEZ76756.1| ribosomal protein S4 [Neisseria lactamica ATCC 23970]
 gi|309379135|emb|CBX22266.1| 30S ribosomal protein S4 [Neisseria lactamica Y92-1009]
 gi|313004927|emb|CBN86353.1| 30S ribosomal protein S4 [Neisseria lactamica 020-06]
          Length = 206

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKLDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ + VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P +++V+ D +
Sbjct: 119 SHKAIAVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALGLAIQIGLPSWVAVDADKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRSE---LTGDINEQLVVEFYSK 206


>gi|257425833|ref|ZP_05602257.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428499|ref|ZP_05604897.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431133|ref|ZP_05607510.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433815|ref|ZP_05610173.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus E1410]
 gi|257436732|ref|ZP_05612776.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus M876]
 gi|282911345|ref|ZP_06319147.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914514|ref|ZP_06322300.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M899]
 gi|282924860|ref|ZP_06332526.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C101]
 gi|293503592|ref|ZP_06667439.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510608|ref|ZP_06669313.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus M809]
 gi|293537149|ref|ZP_06671829.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M1015]
 gi|257271527|gb|EEV03673.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275340|gb|EEV06827.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278081|gb|EEV08729.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281908|gb|EEV12045.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus E1410]
 gi|257284083|gb|EEV14206.1| SSU ribosomal protein S4 [Staphylococcus aureus subsp. aureus M876]
 gi|282313226|gb|EFB43622.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C101]
 gi|282321695|gb|EFB52020.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M899]
 gi|282325040|gb|EFB55350.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus WBG10049]
 gi|290919994|gb|EFD97062.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus M1015]
 gi|291095258|gb|EFE25523.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466499|gb|EFF09020.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus M809]
 gi|312437824|gb|ADQ76895.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           TCH60]
          Length = 200

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K    I V++KS++L  ++E+ ++    VPEY++ + D++  TFV
Sbjct: 119 ILVDGKRVDIPSYSVKPSQTISVREKSQKLNIIVESVEI-NNFVPEYLNFDADSLTGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200


>gi|239637962|ref|ZP_04678923.1| ribosomal protein S4 [Staphylococcus warneri L37603]
 gi|239596525|gb|EEQ79061.1| ribosomal protein S4 [Staphylococcus warneri L37603]
          Length = 200

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAAKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+GR V+I SY  K G  + V++KS++L  + E+ ++    VPEY++ + D++  TFV
Sbjct: 119 IEVDGRRVDIPSYSLKPGQEVAVREKSQKLNIITESVEI-NNFVPEYLNFDADSLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|217967395|ref|YP_002352901.1| ribosomal protein S4 [Dictyoglomus turgidum DSM 6724]
 gi|226732179|sp|B8E1F9|RS4_DICTD RecName: Full=30S ribosomal protein S4
 gi|217336494|gb|ACK42287.1| ribosomal protein S4 [Dictyoglomus turgidum DSM 6724]
          Length = 206

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 14/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K P   R + PG HG+ ++    Y GL+LR 
Sbjct: 1   MARYTGPDCRLCRREGMKLFLKGTKCFSEKCPFERRPFPPGQHGRAQRKLTEY-GLRLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ+ K+ YG + E++FR  F+ A + RG T   L+  LE+RLD +VYR  +  +   ARQ
Sbjct: 60  KQRAKRIYGVL-ERQFRRYFEIASKGRGVTGERLLQLLETRLDNVVYRLGWALSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H  + VNG+ VNI SY  K GDV+E+    K L  V EA      + VP ++ ++ +
Sbjct: 119 IVSHGKIAVNGKRVNIPSYNLKPGDVVELLD--KDLIPVQEAISVFGNKSVPAWLELDRE 176

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+    +R+P   +       +Q  L+VEFYSR
Sbjct: 177 NLRGKVLRLPKREE---IDTPVQEQLIVEFYSR 206


>gi|330684381|gb|EGG96107.1| ribosomal protein S4 [Staphylococcus epidermidis VCU121]
          Length = 200

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAAKQYGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+GR V+I SY  K G  I V++KS++L  + E+ ++    VPEY++ + D++  TFV
Sbjct: 119 IEVDGRRVDIPSYSLKPGQEIAVREKSQKLNIITESVEI-NNFVPEYLNFDADSLKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RFPERSE---LPAEINEQLIVEYYSR 200


>gi|313206370|ref|YP_004045547.1| SSU ribosomal protein s4p [Riemerella anatipestifer DSM 15868]
 gi|312445686|gb|ADQ82041.1| SSU ribosomal protein S4P [Riemerella anatipestifer DSM 15868]
 gi|315023689|gb|EFT36693.1| 30S ribosomal protein S4 [Riemerella anatipestifer RA-YM]
 gi|325336184|gb|ADZ12458.1| Ribosomal protein S4 related protein [Riemerella anatipestifer
           RA-GD]
          Length = 202

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/208 (39%), Positives = 115/208 (55%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQKM 58
           M++    K KI R+ G  ++G  K+    R+  PG HG   RR +K S + +QL  KQK 
Sbjct: 1   MARYIGPKTKIARKFGAAIYGDDKNFEKRRNQPPGQHGPNKRRGAKKSEYAVQLAEKQKA 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I E++F ++FK+A  S+G T   L+   ESRLD +VYR  F  T  AARQ V+H
Sbjct: 61  KYTYG-ILERQFSNLFKKAHASKGVTGEVLLQLCESRLDNVVYRLGFAKTRAAARQLVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
           RH+ VNG  VNI SY  K GD + V+QKSK L  +  A         +++  N +    T
Sbjct: 120 RHITVNGEVVNIPSYSLKPGDKVAVRQKSKSLEVIETALSAKAN--YDWLQFNDETKEGT 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           FV +P     +  P  ++  L+VE YS+
Sbjct: 178 FVGVPER---IQIPEDIKEQLIVELYSK 202


>gi|92112578|ref|YP_572506.1| SSU ribosomal protein S4P [Chromohalobacter salexigens DSM 3043]
 gi|122420778|sp|Q1R0F1|RS4_CHRSD RecName: Full=30S ribosomal protein S4
 gi|91795668|gb|ABE57807.1| SSU ribosomal protein S4P [Chromohalobacter salexigens DSM 3043]
          Length = 206

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +   +P   +      PG+HGQ R+ + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVTPFEKKCKSEQIPGVHGQ-RRQRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGATGELLLQLLESRLDNVVYRMGFGSTRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNGR+VN+ SY+ K GDV+ V++K+K  A +  A  + A R    +I V+   M
Sbjct: 119 SHKAIAVNGRTVNVASYQVKPGDVVSVREKAKNQARIQNALGIAANRGDVAWIDVDSKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P           +  NL+VE YS+
Sbjct: 179 EGTFKAVPERGD---LSADINENLIVELYSK 206


>gi|198273978|ref|ZP_03206510.1| hypothetical protein BACPLE_00114 [Bacteroides plebeius DSM 17135]
 gi|198273056|gb|EDY97325.1| hypothetical protein BACPLE_00114 [Bacteroides plebeius DSM 17135]
          Length = 201

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNNRRRKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A    G T   L+  LE RLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-EKQFRNMFEKAAGMNGITGEILLQSLECRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI S+  K G ++ V++KSK L  +  +          ++  + ++ +   +
Sbjct: 119 ITVDGKVVNIPSFSVKPGQLVGVREKSKSLEVIANSLAGFNHSKYPWLEWDENSKIGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++ +L+VE YS+
Sbjct: 179 HVPERAD---IPENIKEHLIVELYSK 201


>gi|294142909|ref|YP_003558887.1| 30S ribosomal protein S4 [Shewanella violacea DSS12]
 gi|293329378|dbj|BAJ04109.1| ribosomal protein S4 [Shewanella violacea DSS12]
          Length = 206

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKTRLSEYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL++ LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARQKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVNG  VNI S++    DVI +++KSK+ A +  + ++A +R+ P ++ V++  M
Sbjct: 119 SHKSILVNGSVVNIPSFKVSASDVISIREKSKKQARISASLEVASQREKPTWVEVDNTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELYSK 206


>gi|49483960|ref|YP_041184.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282904289|ref|ZP_06312177.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus C160]
 gi|282906114|ref|ZP_06313969.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909029|ref|ZP_06316847.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282919482|ref|ZP_06327217.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C427]
 gi|283958469|ref|ZP_06375920.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428289|ref|ZP_06820918.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590748|ref|ZP_06949386.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MN8]
 gi|56749409|sp|Q6GFY8|RS4_STAAR RecName: Full=30S ribosomal protein S4
 gi|49242089|emb|CAG40788.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282317292|gb|EFB47666.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus C427]
 gi|282327293|gb|EFB57588.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331406|gb|EFB60920.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595907|gb|EFC00871.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus C160]
 gi|283790618|gb|EFC29435.1| ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295127689|gb|EFG57326.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575634|gb|EFH94350.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus MN8]
 gi|315195623|gb|EFU26010.1| 30S ribosomal protein S4 [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 200

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S +GLQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F  A +  G    N +  L SRLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K    I V++KS++L  ++E+ ++    VPEY++ + D++  TFV
Sbjct: 119 ILVDGKRVDIPSYSVKPSQTISVREKSQKLNVIVESVEI-NNFVPEYLNFDADSLTGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RLPERSE---LPAEINEQLIVEYYSR 200


>gi|56477618|ref|YP_159207.1| 30S ribosomal protein S4 [Aromatoleum aromaticum EbN1]
 gi|81357334|sp|Q5P308|RS4_AZOSE RecName: Full=30S ribosomal protein S4
 gi|56313661|emb|CAI08306.1| 30S Ribosomal protein S4 [Aromatoleum aromaticum EbN1]
          Length = 209

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R+Y PG HGQR   + S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKAEKCFTDKCAIERRAYAPGQHGQRSGQRMSGYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR ++ EA+R RG T  NL+  LE RLD++VYR  F  +   +RQ
Sbjct: 61  KQKIRRLYGVL-EAQFRKVYAEAERRRGQTGENLLQLLEGRLDSVVYRMGFGGSRAESRQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H  +LVNG+ VNI SY  + GDV+E+ + S+    V  A +  A R  PE++ V+  
Sbjct: 120 LVRHNGILVNGKRVNIPSYVVRPGDVVELTEGSRGQLRVKAALEAAASRGFPEWLDVDAK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF   P   +    P  +   LVVE YSR
Sbjct: 180 AGKGTFKAYPQRAE---LPPTINEGLVVELYSR 209


>gi|148263164|ref|YP_001229870.1| 30S ribosomal protein S4 [Geobacter uraniireducens Rf4]
 gi|189045382|sp|A5GAU5|RS4_GEOUR RecName: Full=30S ribosomal protein S4
 gi|146396664|gb|ABQ25297.1| SSU ribosomal protein S4P [Geobacter uraniireducens Rf4]
          Length = 208

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K  +  R+Y PG HGQ R +K S +G+QLR 
Sbjct: 1   MARYTGPSCRLCRRENTELFLKGERCYTDKCAIKRRNYPPGQHGQGR-TKTSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR  F+ ADR +G T  NL+  LE RLD I YR  F  +   ARQ
Sbjct: 60  KQKVRRIYG-ILENQFRGYFERADRLKGVTGENLLFLLERRLDNIAYRLGFASSRIEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NGR V I S + K GDV+E+++KS+++A + E+ +    R +P+++ ++  
Sbjct: 119 LVRHGHFTLNGRKVTIPSIQVKAGDVLELREKSRKVACINESLEAVVRRGIPQWLELDKG 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P+  +D+  P  +Q  L+VE YS+
Sbjct: 179 AYKGAVKTLPAR-EDITMP--IQEQLIVELYSK 208


>gi|299822736|ref|ZP_07054622.1| 30S ribosomal protein S4 [Listeria grayi DSM 20601]
 gi|299816265|gb|EFI83503.1| 30S ribosomal protein S4 [Listeria grayi DSM 20601]
          Length = 200

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQ   KQK++ 
Sbjct: 1   MARYTGPSWKVSRRLGISLSGTGKE-LERRPYAPGQHGPNQRKKLSEYGLQQAEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F++ F +A +  G    N +  LE RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-LTERQFKNTFDKAGKLPGKQGENFMILLEQRLDNVVYRFGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY+   G VI V++KS + +S+ E+  ++   VPEY++ + + +  +  
Sbjct: 119 IQVDGKRVDIPSYQVSVGQVITVREKSAKNSSIAESLDVSNF-VPEYVTFDAEKLEGSLN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 178 RLPERSE---LAAEINEAFIVEFYSR 200


>gi|117924179|ref|YP_864796.1| 30S ribosomal protein S4P [Magnetococcus sp. MC-1]
 gi|152060958|sp|A0L5Z7|RS4_MAGSM RecName: Full=30S ribosomal protein S4
 gi|117607935|gb|ABK43390.1| SSU ribosomal protein S4P [Magnetococcus sp. MC-1]
          Length = 208

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   SK ++ RR    L+ +       K  +  R+Y PG HGQRR+ K S +G+ LR 
Sbjct: 1   MARYLGSKCRLCRREATKLFLKGEKCYSDKCAMERRNYVPGQHGQRRR-KVSDYGVHLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR+++K+A+R +G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKVKRSYG-LLEAQFRTLYKKAERMKGVTGENLLQLLERRLDNVVYRLGLAASRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            ++H+ +LVNG+ VN+ SY CK GDV+ V++KS+    +  A   A +R +P ++ V+ +
Sbjct: 119 IISHKTLLVNGKMVNVPSYLCKPGDVVAVREKSRGQLRIKGALASAMQRGLPSWVEVDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +V TF  IP        P     NL+VE YS+
Sbjct: 179 KLVGTFRSIPERSD---LPAEFNENLIVELYSK 208


>gi|313158250|gb|EFR57652.1| ribosomal protein S4 [Alistipes sp. HGB5]
          Length = 202

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M K    K KI R+ GE ++G  K  +  R++ PG HG  R++ K S +G QL  KQK K
Sbjct: 1   MGKYIGPKSKIARKFGEAIYGADK-VLEKRNFPPGQHGLARKRKKVSEYGTQLSEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+F   + +A R  G T  NL+  LE RLD +VYR    PT  AARQ V+H 
Sbjct: 60  YTYG-LLEKQFARTYDQAARMGGITGENLLKLLECRLDNVVYRLGIAPTRAAARQLVSHC 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  + GDV+ V++KSK L  +  +     +    ++  ++ +M   F
Sbjct: 119 HICVNGNVVNIPSYSLRAGDVVSVREKSKSLEVISASLAGGSKSRYAWLEWDNASMSGKF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ P   +    P  ++  L+VE YS+
Sbjct: 179 LQKPEREE---IPENIKEQLIVELYSK 202


>gi|78043798|ref|YP_361091.1| 30S ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901]
 gi|90101680|sp|Q3A9U3|RS4_CARHZ RecName: Full=30S ribosomal protein S4
 gi|77995913|gb|ABB14812.1| ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 208

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 115/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +       K  +  R+Y PG HG  RK KP+ + LQLR 
Sbjct: 1   MARYTGPVCKLCRREGIKLFLKGDRCYTDKCAIARRNYAPGQHGHTRK-KPTEYALQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR  F+ A+R  G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKAKRIYGVL-EAQFRRYFEMAERQPGITGENLLVILERRLDNVVYRLGLAESRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    VNGR VNI SY  K GDVI +K++ K      E  +  A + +P ++S + +
Sbjct: 119 LVRHNFFTVNGRKVNIPSYLVKVGDVIALKEEKKDSPIAKEIMERAASKTLPAWLSYDAN 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N V     +P   +D+  PV  + +L+VE YSR
Sbjct: 179 NAVGKVEALPKR-EDIDIPV--EEHLIVELYSR 208


>gi|320108369|ref|YP_004183959.1| 30S ribosomal protein S4 [Terriglobus saanensis SP1PR4]
 gi|319926890|gb|ADV83965.1| ribosomal protein S4 [Terriglobus saanensis SP1PR4]
          Length = 209

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K  +  R++ PG HGQ R  K   +GLQLR 
Sbjct: 1   MARYTGAVCRLCRRDGVKLFLKGTRCFSDKCAIEKRNFPPGQHGQARAKKIVGYGLQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ Y  + E +FR+ +++A    G T   L+  LE+RLD +VYR  F      +RQ
Sbjct: 61  KQKAKRIYFTL-ETQFRAYYEKASNRTGVTGELLLQQLETRLDNVVYRLGFAIARRQSRQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HV VNGR VNI S++ K GDVIE+++KSK+L     A    A +  P ++ ++ D
Sbjct: 120 VVRHGHVNVNGRKVNIPSFQVKVGDVIELREKSKKLTIAEGAKDFAAAQSTPTWLEIDRD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N     +  P   +D+  PV     L+VE YS+
Sbjct: 180 NYSGKVIAFPKR-EDIQLPV--NEQLIVELYSK 209


>gi|192359460|ref|YP_001981232.1| 30S ribosomal protein S4 [Cellvibrio japonicus Ueda107]
 gi|226697819|sp|B3PK61|RS4_CELJU RecName: Full=30S ribosomal protein S4
 gi|190685625|gb|ACE83303.1| ribosomal protein S4 [Cellvibrio japonicus Ueda107]
          Length = 206

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +     ++++      PG HGQ R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPTCKLSRREGTDLFLKSGARALDSKCKIETAPGQHGQ-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR  +KEA R +G T  NL+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRGYYKEAARRKGATGENLLKLLESRLDNVVYRMGFGATRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ + VNG++VN+ S++   GDV+ V++K+K    +  A  LA +R   E++ VN +  
Sbjct: 119 SHKAISVNGKTVNVASFQVAAGDVVAVREKAKNQLRIQSALNLAGQRSNVEWVDVNTEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P     V  P  +  NL+VE YS+
Sbjct: 179 EGVFKRVPDR---VDLPADINENLIVELYSK 206


>gi|330719419|ref|ZP_08314019.1| 30S ribosomal protein S4 [Leuconostoc fallax KCTC 3537]
          Length = 203

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K ++ RR+G +L G  K  ++ R+Y PG HG  R+SK S +G+QLR KQK++ 
Sbjct: 1   MSRYTGPKWRLSRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRSKLSEYGVQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F +A   R  T   N +  LE RLD++V+R  F  +   ARQ VNH 
Sbjct: 60  TYG-LTERQFHALFNKAGSIRKGTHGTNFMILLEQRLDSLVFRLGFATSRAQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY    G  I V+ KSK +  +  A + A    P+++S + D +  + 
Sbjct: 119 HILVDGKRVDIPSYHVVPGQEISVRDKSKNIVPIQSAIE-AVVSRPQFVSFDADKLTGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   L+VE+Y+R
Sbjct: 178 VRLPEREE---LDADINEALIVEYYNR 201


>gi|189424436|ref|YP_001951613.1| 30S ribosomal protein S4 [Geobacter lovleyi SZ]
 gi|226699069|sp|B3E856|RS4_GEOLS RecName: Full=30S ribosomal protein S4
 gi|189420695|gb|ACD95093.1| ribosomal protein S4 [Geobacter lovleyi SZ]
          Length = 208

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K  +  R+Y PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYIGPSCRLCRRENMELFLKGDRCYTDKCALKRRNYPPGQHGQGRS-KTSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FRS F  ADR +G T  NL+S LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVKRLYG-LLEKQFRSYFDRADRMKGVTGENLLSLLERRLDNVVYRLGFASSRSEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H ++NGR   I S + K GD I +++KS+ +A++ EA      R +P+++ ++ D
Sbjct: 119 LVRHGHFVLNGRKATIPSIQVKAGDTIVLREKSRNVAAISEALDAVVRRGIPQWLELDRD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P   +D+  P  +Q  L+VE YS+
Sbjct: 179 AFTGLAKTVPVR-EDISTP--IQEQLIVELYSK 208


>gi|332170584|gb|AEE19839.1| ribosomal protein S4 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 201

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAVQLAEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR+++  A+R+ G T   L+   E RLD +V+R    P+   ARQ V HR
Sbjct: 60  YTYG-ILERQFRNMYDRANRAPGITGEVLLQLCECRLDNVVHRMGMSPSRSGARQLVGHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI S++ K GDV+ V++KSK L  +  + Q +  +V E+IS N+D    TF
Sbjct: 119 HITVNGSIVNIPSFQVKPGDVVAVREKSKSLEVISNSLQNSS-NVYEWISWNNDKKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V IP  L+    P  +    +VE YS+
Sbjct: 178 VAIPQRLQ---IPENINTQFIVELYSK 201


>gi|116667413|pdb|2GY9|D Chain D, Structure Of The 30s Subunit Of A Pre-Translocational E.
           Coli Ribosome Obtained By Fitting Atomic Models For Rna
           And Protein Components Into Cryo-Em Map Emd-1056
 gi|116667465|pdb|2GYB|D Chain D, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
           Ribosome Complex Obtained By Fitting Atomic Models For
           Rna And Protein Components Into Cryo-Em Map Emd-1143
          Length = 204

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 125/209 (59%), Gaps = 10/209 (4%)

Query: 3   KRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKM 58
           +    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+
Sbjct: 1   RYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           ++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+H
Sbjct: 60  RRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
           + ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M  
Sbjct: 119 KAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           TF R P           +  +L+VE YS+
Sbjct: 179 TFKRKPERSD---LSADINEHLIVELYSK 204


>gi|255038115|ref|YP_003088736.1| 30S ribosomal protein S4 [Dyadobacter fermentans DSM 18053]
 gi|254950871|gb|ACT95571.1| ribosomal protein S4 [Dyadobacter fermentans DSM 18053]
          Length = 201

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR GE + G  K  +  ++Y PG+HG+ R+SK S + LQL  KQK+K 
Sbjct: 1   MARYTGPKTKVARRYGEPIMGPSK-ALAKKNYPPGMHGKGRRSKKSEYALQLAEKQKVKF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I E++FRS+F++A    G T  NL+ + E+RLD  VYR    PT  AARQ V+H+H
Sbjct: 60  IYG-ILERQFRSLFEKASVKAGLTGENLLRYCEARLDNTVYRLGIAPTRRAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G  VNI SY  + G V+ V++KSK L +V ++          ++  N   +   F+
Sbjct: 119 ILVDGEIVNIPSYSLRPGQVVTVREKSKSLEAVTDSLAGHSSKGFSWLEWNGQELSGKFI 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  +   L+VE YS+
Sbjct: 179 SYPDR---ESIPENINEQLIVELYSK 201


>gi|171914054|ref|ZP_02929524.1| 30S ribosomal protein S4 [Verrucomicrobium spinosum DSM 4136]
          Length = 203

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/208 (38%), Positives = 113/208 (54%), Gaps = 7/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           M++    K KI RR G  L+G  K  +  R++ PG HG R  + K S +G+ L  KQK++
Sbjct: 1   MARYTGPKEKIARRFGVALFGPSK-ALELRNFPPGQHGARNTRRKLSDYGIALAEKQKLR 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+FR  F EA R +G T   L+  LE RLD +VYR  F  + FAARQ V H 
Sbjct: 60  HTYGVL-EKQFRRFFAEASRRKGVTGTILLQMLEQRLDNVVYRMGFANSRFAARQMVGHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVAT 178
           HV VNG+  NI S + K GDV+ VK  ++          L +  + P++++V+ D +  T
Sbjct: 119 HVTVNGKRCNIASAQIKAGDVVAVKSTARSQQLANRFLDLTQGVNSPDWMTVDRDKLTGT 178

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R P   +     V +   LVVE YSR
Sbjct: 179 VNRSPEREE---IDVFVNEQLVVELYSR 203


>gi|167031523|ref|YP_001666754.1| 30S ribosomal protein S4 [Pseudomonas putida GB-1]
 gi|189045393|sp|B0KK90|RS4_PSEPG RecName: Full=30S ribosomal protein S4
 gi|166858011|gb|ABY96418.1| ribosomal protein S4 [Pseudomonas putida GB-1]
          Length = 206

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++ A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ + GDV+ V++KS     +++A +L A+R   E++ V+    
Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSLAQLRIVQALELCAQRGRVEWVDVDAAKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  NL+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206


>gi|325299106|ref|YP_004259023.1| ribosomal protein S4 [Bacteroides salanitronis DSM 18170]
 gi|324318659|gb|ADY36550.1| ribosomal protein S4 [Bacteroides salanitronis DSM 18170]
          Length = 201

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I R+ GE ++G  K  ++ ++Y PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYTGPKTRIARKFGEAIFGADK-VLSKKNYPPGQHGNTRRRKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A    G T   L+  LE RLD IV+R    PT  AARQ V+H+H
Sbjct: 60  TYGVL-EKQFRNLFEKAASMNGITGEILLQSLECRLDNIVFRLGIAPTRAAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI S+  K G +I V++KSK L ++  +          ++  + ++ +   +
Sbjct: 119 ITVDGKVVNIPSFAVKPGQLIGVREKSKSLEAIANSLAGFNHSKYPWLEWDENSKMGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P        P  ++ +++VE YS+
Sbjct: 179 HVPERAD---IPENIKEHMIVELYSK 201


>gi|228470684|ref|ZP_04055535.1| ribosomal protein S4 [Porphyromonas uenonis 60-3]
 gi|228307541|gb|EEK16537.1| ribosomal protein S4 [Porphyromonas uenonis 60-3]
          Length = 201

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE ++G  K  ++ ++Y PG HG  R+ K S + LQLR KQ  K 
Sbjct: 1   MARYIGPKSKIARKFGEPIFGADK-VLSKKNYPPGQHGNNRRRKQSEYALQLREKQMAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A R+ G T   L+  LESRLD +V+R    PT  AARQ V+HRH
Sbjct: 60  TYGVL-ERQFRNLFEKAQRTSGITGEILLQLLESRLDNVVFRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SY  K G ++ V+++ K +  + ++          ++  +       ++
Sbjct: 119 IVVDGEVVNIPSYTLKPGQIVGVRERDKSMEVIADSLAGYNHSKYPWLEWDARTYSGKYL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+  +    P  ++  L+VE YS+
Sbjct: 179 NVPTREE---IPEPIKEQLIVELYSK 201


>gi|322384358|ref|ZP_08058056.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150860|gb|EFX44297.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 199

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR+G +L G  K     R + PG HG  ++ K S +G+QL  KQK++ 
Sbjct: 1   MARYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGPTQRRKVSGYGMQLMEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+F +++ +A +  G +  N +  LESRLD +V+R  F  +   ARQ V+H H
Sbjct: 59  MYG-LNEKQFHNLYNKAIKLPGISGENFMILLESRLDNLVFRLGFANSRAGARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SY+   GDVI ++++S+ L S+ EA +     +P Y+  N   +   F+
Sbjct: 118 VTVNGKKVDIASYQVSVGDVIGLRERSRNLKSIKEALE-NRNFLPAYLEFNEQALEGKFI 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 177 RLPERSE---LAQEIDEKQIVEFYSR 199


>gi|116749016|ref|YP_845703.1| 30S ribosomal protein S4 [Syntrophobacter fumaroxidans MPOB]
 gi|152112270|sp|A0LIL6|RS4_SYNFM RecName: Full=30S ribosomal protein S4
 gi|116698080|gb|ABK17268.1| SSU ribosomal protein S4P [Syntrophobacter fumaroxidans MPOB]
          Length = 208

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  +I RR    L+ +       K  V  R+Y PG HGQ R  K S +GLQLR 
Sbjct: 1   MARYTDSSCRICRRETMKLYLKGDRCYSDKCAVERRNYPPGQHGQGR-GKFSDYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+F++ FK ADR +G T  N ++ LE R+D  VYR  F  +   ARQ
Sbjct: 60  KQKIRRMYGLV-EKQFKTYFKHADRQKGVTGTNFLTLLERRIDNTVYRLGFASSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H LVNG+ VNI S+  + GD + V + S+QL  + EA + +  R +P ++ ++  
Sbjct: 119 LVRHSHFLVNGKKVNIPSFLLRPGDSVSVVEGSRQLQMINEAMEAMPRRGLPPWLELDKA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F  +P+  +     + +Q  LVVEFYS+
Sbjct: 179 KYEGVFKTLPTREE---MNLPVQEQLVVEFYSK 208


>gi|26987219|ref|NP_742644.1| 30S ribosomal protein S4 [Pseudomonas putida KT2440]
 gi|148545763|ref|YP_001265865.1| 30S ribosomal protein S4 [Pseudomonas putida F1]
 gi|37999419|sp|Q88QL2|RS4_PSEPK RecName: Full=30S ribosomal protein S4
 gi|172048431|sp|A5VXS1|RS4_PSEP1 RecName: Full=30S ribosomal protein S4
 gi|24981858|gb|AAN66108.1|AE016239_3 ribosomal protein S4 [Pseudomonas putida KT2440]
 gi|148509821|gb|ABQ76681.1| SSU ribosomal protein S4P [Pseudomonas putida F1]
 gi|313496843|gb|ADR58209.1| RpsD [Pseudomonas putida BIRD-1]
          Length = 206

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++ A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ + GDV+ V++KS     +++A +L A+R   E++ V+    
Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVAVREKSLGQLRIVQALELCAQRGRVEWVDVDAAKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  NL+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206


>gi|46205031|ref|ZP_00049140.2| COG0522: Ribosomal protein S4 and related proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 191

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 130/192 (67%), Positives = 150/192 (78%), Gaps = 1/192 (0%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G+N+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K YYG+I+EK+FR  +
Sbjct: 1   MGQNIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKGYYGNITEKQFRRYY 60

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
            EA R RGD+  NLI  LE RLD +VYRAKFV T FAARQFVNH HV VNGR VNI S++
Sbjct: 61  AEAIRLRGDSGENLIGLLERRLDAVVYRAKFVATPFAARQFVNHGHVKVNGRRVNIPSFQ 120

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
            K GDVIEVK+ S+QL  V+ ASQLAERDVP+YI V+H  M A   RIP  L +VPYPV 
Sbjct: 121 VKAGDVIEVKEASRQLEIVVVASQLAERDVPDYIEVDHQKMSARVTRIPG-LSEVPYPVQ 179

Query: 195 MQPNLVVEFYSR 206
           M+PNLV+EFYSR
Sbjct: 180 MEPNLVIEFYSR 191


>gi|262377288|ref|ZP_06070512.1| ribosomal protein S4 [Acinetobacter lwoffii SH145]
 gi|262307741|gb|EEY88880.1| ribosomal protein S4 [Acinetobacter lwoffii SH145]
          Length = 208

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P + ++      PG HG  R  K S + LQLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKHAKVPGQHGGARGGKQSEYSLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRMYGVL-ERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDN 174
           V+HR + +NGR VNI S + K GDVI V + +KQ   +  A +LA +R +P ++ ++H  
Sbjct: 120 VSHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELATQRGMPSWMEIDHSK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF   P        P  +  +L+VE YS+
Sbjct: 180 LEGTFKAAPDRSD---LPAEINESLIVELYSK 208


>gi|47565070|ref|ZP_00236113.1| ribosomal protein S4 [Bacillus cereus G9241]
 gi|47557856|gb|EAL16181.1| ribosomal protein S4 [Bacillus cereus G9241]
          Length = 200

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K G  I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPGQTISVREKSNNLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +       +   L+VEFYSR
Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200


>gi|297569396|ref|YP_003690740.1| ribosomal protein S4 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925311|gb|ADH86121.1| ribosomal protein S4 [Desulfurivibrio alkaliphilus AHT2]
          Length = 209

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +       K     RSY PG HGQ R  K S + LQLR 
Sbjct: 1   MARYTGAVCRQCRREKLKLFLKGDRCYSDKCSFERRSYAPGQHGQARLRKVSDYALQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F EA+R RG T   L+  LESRLD +VYR  F  +   AR 
Sbjct: 61  KQKVKRIYGML-EDQFRRYFDEAERRRGVTGEILLQMLESRLDNVVYRLGFAASRNQARH 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H L+NGR VNI S + K GDVI +++KS+++ ++ E+    A R VP ++ +N D
Sbjct: 120 LVRHNHFLLNGRKVNIPSLQVKVGDVITLREKSREVEAIKESLAAVARRGVPTWLELNQD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T    P   +     + +Q  L+VE YS+
Sbjct: 180 AFSGTVKSAPDRQE---LTMPIQEQLIVELYSK 209


>gi|94266329|ref|ZP_01290031.1| Ribosomal protein S4:RNA-binding S4 [delta proteobacterium MLMS-1]
 gi|93453083|gb|EAT03562.1| Ribosomal protein S4:RNA-binding S4 [delta proteobacterium MLMS-1]
          Length = 209

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +       K     RSY PG HGQ R  K S + +QLR 
Sbjct: 1   MARYTGAVCRQCRREKLKLFLKGDRCYSDKCSFERRSYAPGQHGQARLRKVSDYAMQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +F   F EA+R RG T  NL+  LE RLD ++YR  F  +   AR 
Sbjct: 61  KQKVKRMYGML-EGQFHRYFVEAERQRGVTGENLLRLLECRLDNVIYRLGFASSRNQARH 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173
            V H H L+NG  VNI S + K GDV+ V++KS+Q   + E+   +A R VP ++ +N +
Sbjct: 120 LVRHNHFLLNGHKVNIPSLQVKVGDVLTVREKSRQKGMIQESLAAMARRGVPTWLELNQE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T    P   +     + +Q  L+VE YS+
Sbjct: 180 AFSGTVKSAPERQE---LTMPIQEQLIVELYSK 209


>gi|110639510|ref|YP_679719.1| 30S ribosomal protein S4 [Cytophaga hutchinsonii ATCC 33406]
 gi|123058544|sp|Q11QD7|RS4_CYTH3 RecName: Full=30S ribosomal protein S4
 gi|110282191|gb|ABG60377.1| SSU ribosomal protein S4P [Cytophaga hutchinsonii ATCC 33406]
          Length = 201

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I RR GE + G  K  +  ++Y PG+HG+ +K K S + +QL+ KQK K 
Sbjct: 1   MARYTGPRSRISRRFGEPVMGDSK-ALQKKNYAPGMHGRNKKRKQSEYSIQLKEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++F   F  A R +G T  NL+  LE+RLD  VYR     +  AARQ V H+H
Sbjct: 60  TYGVL-ERQFAKTFDTAARKQGITGENLLKMLEARLDNTVYRLGIASSRRAARQLVIHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VNG  VNI SY+ K GD + V++KSK + ++ ++          ++  +  +M+  FV
Sbjct: 119 IVVNGDVVNIPSYQLKPGDQLGVREKSKSIEAITDSLSTQSAKKFTWLEWDQSSMLGKFV 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P   +    P  +Q  L+VE YS+
Sbjct: 179 TYPQREE---IPENIQEQLIVELYSK 201


>gi|226942802|ref|YP_002797875.1| 30S ribosomal protein S4 [Azotobacter vinelandii DJ]
 gi|259495268|sp|C1DKN7|RS4_AZOVD RecName: Full=30S ribosomal protein S4
 gi|226717729|gb|ACO76900.1| 30S ribosomal protein S4 [Azotobacter vinelandii DJ]
          Length = 206

 Score =  211 bits (538), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS-PVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  S  + ++      PG+HGQRR     Y G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGSRALESKCNVESAPGIHGQRRGRLSEY-GTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +KEA R +G T  NL+  LE RLD +VYR  F  T   +RQ +
Sbjct: 60  KVRRIYGVL-ERQFSGYYKEASRRKGSTGENLLQLLECRLDNVVYRMGFGATRAESRQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ K GDV+ +++K+K    + +A +L A+R   E++ V+ +  
Sbjct: 119 SHKAITVNGQTVNIPSYQVKVGDVVAIREKAKNQLRIAQALELCAQRGRVEWVEVDTEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  NL+VE YS+
Sbjct: 179 SGVFKSVPARSD---LSADINENLIVELYSK 206


>gi|104779779|ref|YP_606277.1| 30S ribosomal protein S4 [Pseudomonas entomophila L48]
 gi|152112249|sp|Q1IFU2|RS4_PSEE4 RecName: Full=30S ribosomal protein S4
 gi|95108766|emb|CAK13460.1| 30S ribosomal protein S4 [Pseudomonas entomophila L48]
          Length = 206

 Score =  211 bits (538), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  ++ A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQMLECRLDNVVYRMGFGSTRSESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VNI SY+ + GDV+ V++KS     +++A +L A+R   E++ V+    
Sbjct: 119 SHKAISVNGKTVNIPSYQVRPGDVVSVREKSLNQLRIVQALELCAQRGRVEWVDVDAAKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  NL+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINENLIVELYSK 206


>gi|78189781|ref|YP_380119.1| 30S ribosomal protein S4 [Chlorobium chlorochromatii CaD3]
 gi|90101681|sp|Q3APJ9|RS4_CHLCH RecName: Full=30S ribosomal protein S4
 gi|78171980|gb|ABB29076.1| SSU ribosomal protein S4P [Chlorobium chlorochromatii CaD3]
          Length = 203

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 86/207 (41%), Positives = 119/207 (57%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R + PG HGQ RK K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGIALAPKAEKYLERRPFPPGQHGQGRKGKISEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR+ +K+A   RG T  NL+  LE RLD IV+RA F P+   ARQ V+H H
Sbjct: 61  LYG-ILEKQFRNYYKKAVAQRGVTGDNLVKLLERRLDNIVFRAGFSPSRAGARQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           V VNG+ V+I SY     DV+E +QKSK +++V ++     E  +P +I V+  +  A F
Sbjct: 120 VTVNGKKVDIPSYLVSPADVMEFRQKSKNMSAVTDSLNKTPESRIPAWIQVDKAHQKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P               LVVE YS+
Sbjct: 180 LSVPERAD---IQEEFNEQLVVELYSK 203


>gi|163859246|ref|YP_001633544.1| 30S ribosomal protein S4 [Bordetella petrii DSM 12804]
 gi|226697810|sp|A9IHR7|RS4_BORPD RecName: Full=30S ribosomal protein S4
 gi|163262974|emb|CAP45277.1| 30S ribosomal protein S4 [Bordetella petrii]
          Length = 207

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +GLQLR KQ
Sbjct: 1   MARYTGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR + VNG + +I S   K GDVI V++K+K+   + EA  LA    +P+++ V+ + M
Sbjct: 120 SHRAIEVNGHTADIASLIVKAGDVITVREKAKKQGRIREALDLASSIGIPQWVEVDTNKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P           +  ++VVE YSR
Sbjct: 180 AGTFKSMPDRAD---VARDINESMVVELYSR 207


>gi|145588266|ref|YP_001154863.1| ribosomal protein S4 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189045391|sp|A4SUY5|RS4_POLSQ RecName: Full=30S ribosomal protein S4
 gi|145046672|gb|ABP33299.1| SSU ribosomal protein S4P [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 207

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++T+   PG HG+   S+ S +G QLR
Sbjct: 1   MARYLGPKAKLARREGTDLFLKSARRALSDKCKLDTK---PGQHGRTSGSRTSDYGNQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EA+R +G+T   L+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRIYGVL-ERQFRRYFAEAERRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNH 172
           Q V+H  +L+NG  VNI S + K GDV+ +++K+K+ A + E+  L  +     ++SV+ 
Sbjct: 117 QLVSHCAILLNGSPVNIPSIQVKPGDVVAIREKAKKQARITESLNLVGQMAAVTWVSVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  TF ++P           +  +L+VE YSR
Sbjct: 177 AKLEGTFKQVPDR---EDISGEINESLIVELYSR 207


>gi|15605669|ref|NP_213044.1| 30S ribosomal protein S4 [Aquifex aeolicus VF5]
 gi|6226103|sp|O66484|RS4_AQUAE RecName: Full=30S ribosomal protein S4
 gi|2982819|gb|AAC06442.1| ribosomal protein S04 [Aquifex aeolicus VF5]
          Length = 211

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 6/211 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQ 56
           M +      K+DRR G  + G+  +P  +  R+Y PG HG++  R+ K + +GL+L  KQ
Sbjct: 1   MGRYIGPWVKLDRRFGVVVSGKKSAPKILARRNYPPGQHGRKYGRRKKLTEYGLRLMEKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K  YG + EK+F+  F  A +S+ +T   L+ +LE RLD +VYR  F  T   ARQ V
Sbjct: 61  KLKFLYGGLREKQFKKYFDMASKSKENTGEMLLQYLERRLDNVVYRLGFASTRRQARQLV 120

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H HVLVNG+ VNI SY  + GDVIE+K+KS+ +  + E  +  + R +P ++ ++ DN 
Sbjct: 121 AHGHVLVNGKKVNIPSYLVEPGDVIEIKEKSRDIPFIKENLENVDPRSIPSWLELDKDNF 180

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               VR+P ++++    + +    +VEFYS+
Sbjct: 181 RGRVVRLPENVQEY-LEIPINLQYIVEFYSK 210


>gi|83591248|ref|YP_431257.1| 30S ribosomal protein S4 [Moorella thermoacetica ATCC 39073]
 gi|123725621|sp|Q2RFS5|RS4_MOOTA RecName: Full=30S ribosomal protein S4
 gi|83574162|gb|ABC20714.1| SSU ribosomal protein S4P [Moorella thermoacetica ATCC 39073]
          Length = 208

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++ + S  ++ RR G  L+ +       K  V  RSY PG HGQ RK    Y GLQLR 
Sbjct: 1   MARYKDSTCRLCRREGTKLFLKGDRCYSDKCAVARRSYPPGQHGQGRKKVSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E++FR+ F++A+R +G T  NL+  LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVRRIYG-ILERQFRNYFEKAERQKGVTGENLLILLERRLDNVVYRLGFADSRAEART 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173
            V H H LVNGR VNI SY  + GD I V++KSK      E A   A R+VP ++  +  
Sbjct: 119 LVRHGHFLVNGRKVNIPSYLVRPGDTISVREKSKASPKFKEIAEAAAHRNVPAWLKADSS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    + +P+  +        Q +L+VE YSR
Sbjct: 179 TLEGHVLALPTREQ---IDTPAQEHLIVELYSR 208


>gi|258513667|ref|YP_003189889.1| 30S ribosomal protein S4 [Desulfotomaculum acetoxidans DSM 771]
 gi|257777372|gb|ACV61266.1| ribosomal protein S4 [Desulfotomaculum acetoxidans DSM 771]
          Length = 208

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    + K+ RR G  L+ +       K  ++ RSY PG HGQ R+    Y G QLR 
Sbjct: 1   MARYTGPQCKLCRREGLKLYLKGDRCYSDKCAIDRRSYPPGQHGQSRRKVSEY-GTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+FR+ F  ADR +G T  NL+  LE R+D +++R     +   ARQ
Sbjct: 60  KQKVRRIYGVL-EKQFRTYFDRADRQQGITGENLLRLLERRMDNVIFRMGLGASRVEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  VNGR V+I S+  K GDVI +++ SK    + E  +  AE+  P ++  + D
Sbjct: 119 LVTHGHFTVNGRKVDIPSFLVKVGDVIGIREGSKDSPRIKELMERAAEKTRPAWLEYDSD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 V +P   +       +Q +L+VE YSR
Sbjct: 179 AAQGRIVALPRRDE---IDAPVQEHLIVELYSR 208


>gi|148244353|ref|YP_001219047.1| 30S ribosomal protein S4 [Candidatus Vesicomyosocius okutanii HA]
 gi|172047241|sp|A5CXI8|RS4_VESOH RecName: Full=30S ribosomal protein S4
 gi|146326180|dbj|BAF61323.1| 30S ribosomal protein S4 [Candidatus Vesicomyosocius okutanii HA]
          Length = 208

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 126/212 (59%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQR-RKSKPSYFGLQLRAK 55
           M++      K+ RR G +L+ +     ++++      PG+HG   R+ K + +GLQLR K
Sbjct: 1   MARYTGPTCKLARREGADLFLKSGIRSLDSKCKVTQLPGMHGASARRQKGTEYGLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG I EK+FR  +K+A + +G T  NL+S LE RLD +VYR  F  T   ARQ 
Sbjct: 61  QKIRRIYG-ILEKQFRLYYKKASQKKGSTGENLLSLLECRLDNVVYRMGFASTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDN 174
           V+H+ ++VNG  VNI SY+    D I +++K+K+ + +  A +L+ +   P+++ V++  
Sbjct: 120 VSHKSIMVNGLVVNIPSYQVSVNDKISIREKAKKQSRIQLALELSGQSTQPQWLDVDNKT 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F  +PS  +    P  +Q +L+VE YS+
Sbjct: 180 LKGVFKNVPSRDE---LPSDIQEHLIVELYSK 208


>gi|81428454|ref|YP_395454.1| 30S ribosomal protein S4 [Lactobacillus sakei subsp. sakei 23K]
 gi|90101691|sp|Q38XD6|RS4_LACSS RecName: Full=30S ribosomal protein S4
 gi|78610096|emb|CAI55145.1| 30S Ribosomal protein S4 [Lactobacillus sakei subsp. sakei 23K]
          Length = 201

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 117/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K K+ RR+G +L G  K  +  R Y PG HG  R+ K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPKWKLSRRLGISLSGTGKE-LARRPYAPGQHGNDRRGKISEYGMQLSEKQKLRL 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      NL+  LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  MYG-LTERQFRNLFARAGKIREGKHGVNLMILLEQRLDNIVYRLGLASTRAQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV V+G+ V+I SY  K G  I +++KSK L  + +A +      P ++  + DN+  + 
Sbjct: 119 HVTVDGKRVDIPSYEVKPGQEISIREKSKNLVIIKDAIE-GTVGRPSFVEFDADNLKGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   L+VEFY+R
Sbjct: 178 VRLPERSELEP---EIDEALIVEFYNR 201


>gi|301628935|ref|XP_002943604.1| PREDICTED: 30S ribosomal protein S4-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 212

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 15/213 (7%)

Query: 2   SKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           ++    K K+ RR G +L+ +        K+  +++   PG HG+    + S +GLQLR 
Sbjct: 7   ARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGQRTSDYGLQLRE 63

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR  F EADR +G+T  NL++ LE RLD +VYR  F  T   ARQ
Sbjct: 64  KQKVKRMYG-VMEKQFRRYFAEADRRKGNTGANLLTLLECRLDNMVYRMGFGSTRAEARQ 122

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V+H+ +LVNG++VNI S+  K GDV+ V++KSK+   V+EA QLA++   P ++ V  D
Sbjct: 123 LVSHKAILVNGQAVNIPSFLVKVGDVVSVREKSKKQGRVVEALQLAQQVGFPAWVEVAAD 182

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F ++P   +   +   +  +L+VE YSR
Sbjct: 183 KAEGVFKKVPDRDE---FGADINESLIVELYSR 212


>gi|190572967|ref|YP_001970812.1| 30S ribosomal protein S4 [Stenotrophomonas maltophilia K279a]
 gi|194364557|ref|YP_002027167.1| 30S ribosomal protein S4 [Stenotrophomonas maltophilia R551-3]
 gi|254521741|ref|ZP_05133796.1| ribosomal protein S4 [Stenotrophomonas sp. SKA14]
 gi|226695080|sp|B4SLH4|RS4_STRM5 RecName: Full=30S ribosomal protein S4
 gi|226695081|sp|B2FQK7|RS4_STRMK RecName: Full=30S ribosomal protein S4
 gi|190010889|emb|CAQ44498.1| putative 30S ribosomal subunit protein S4 [Stenotrophomonas
           maltophilia K279a]
 gi|194347361|gb|ACF50484.1| ribosomal protein S4 [Stenotrophomonas maltophilia R551-3]
 gi|219719332|gb|EED37857.1| ribosomal protein S4 [Stenotrophomonas sp. SKA14]
          Length = 209

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQR-RKSKPSYFGLQL 52
           M++      K+ RR G +L  +        K  +  +   PG HG   RK K S +  QL
Sbjct: 1   MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQK---PGQHGATARKGKLSDYATQL 57

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
           R KQK+K+ YG + E++FR+ +K+A   +G+T  NL+  LE+RLD +VYR  F  T  AA
Sbjct: 58  REKQKVKRIYG-LLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPAA 116

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISV 170
           RQ V+HR V VNG+SVN+ SY+ K GD I + +K+ +   V EA  +A +    P ++ V
Sbjct: 117 RQLVSHRGVTVNGKSVNLASYQVKAGDAIALSEKAAKQLRVQEALTVAAQHDLSPSWVEV 176

Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +       F  +P        P  +   L+VE YS+
Sbjct: 177 DSGKFTGIFKAVPDRSD---LPADINEALIVELYSK 209


>gi|225175647|ref|ZP_03729641.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1]
 gi|225168976|gb|EEG77776.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1]
          Length = 209

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  +  RR G  L+ +       K  V+ R+Y PG HGQRR+ K S +GLQLR 
Sbjct: 1   MARYTGSVCRQCRREGLKLYLKGERCYTEKCAVDRRAYAPGQHGQRRRGKVSEYGLQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + E +F   FKEADR +G T  NL+  LESRLD +VYR  F  +   ARQ
Sbjct: 61  KQKARRTYGVL-ESQFHKYFKEADRRKGITGENLLQILESRLDNVVYRMGFALSRPEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNGR V+I SY+ +  DV+ V++ S+      + ++L   +   E+++V+ +
Sbjct: 120 LVKHGHFTVNGRKVDIPSYQVRPDDVVAVREASRDKGRFKDLAELMRTQGTMEWVNVDRE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+    +R+P+  +     + +  +L+VE YSR
Sbjct: 180 NLAGKVLRLPTREE---IDIPIAEHLIVELYSR 209


>gi|119502947|ref|ZP_01625032.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2080]
 gi|119461293|gb|EAW42383.1| 30S ribosomal protein S4 [marine gamma proteobacterium HTCC2080]
          Length = 206

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +     ++++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLQLKSGVRSLDSKCKAETAPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVNG  VNI SY+ + GD++ V++K+K+   +  A  +AE R    +I VN + +
Sbjct: 119 SHKGILVNGTVVNIPSYQVRPGDIVSVREKAKKQLRIQAAMSIAEQRGEQVWIEVNSEKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P        P  +  NL+VE YS+
Sbjct: 179 EGTFKSKPERQD---LPSEINENLIVELYSK 206


>gi|327402758|ref|YP_004343596.1| 30S ribosomal protein S4P [Fluviicola taffensis DSM 16823]
 gi|327318266|gb|AEA42758.1| SSU ribosomal protein S4P [Fluviicola taffensis DSM 16823]
          Length = 203

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 7/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQKM 58
           M++    K KI RR  + ++G  K  ++ R YGPG HG   RR  K S + +QL  KQK 
Sbjct: 1   MARYTGPKSKIARRFRDPIFGPDK-ALDKRQYGPGQHGPNKRRGGKQSEYAIQLGEKQKA 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I E++F ++FK+A   +G T  NL+   E RLD  VYR     +  AARQ V+H
Sbjct: 60  KYTYG-ILERQFSNLFKKASGMKGITGENLLQLCEMRLDNTVYRLGIANSRRAARQLVSH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
           +H++VNG  VNI SY  + GDV+ V++KSK L ++  +   +     +++  +       
Sbjct: 119 KHIVVNGEVVNIPSYTLRIGDVVSVREKSKSLEAITSSLTASTNKRYDWLDWDSATKSGK 178

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F+ IPS       P  ++  L+VE YS+
Sbjct: 179 FLSIPSRD---MIPENIKEQLIVELYSK 203


>gi|146308899|ref|YP_001189364.1| 30S ribosomal protein S4 [Pseudomonas mendocina ymp]
 gi|172046040|sp|A4XZ66|RS4_PSEMY RecName: Full=30S ribosomal protein S4
 gi|145577100|gb|ABP86632.1| SSU ribosomal protein S4P [Pseudomonas mendocina ymp]
          Length = 206

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +K+A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKQAASQKGATGENLLQLLECRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VN+ SY+ K GDV+ V++KSK    + +A +L A+R   E++ V+ +  
Sbjct: 119 SHKAISVNGQTVNVPSYQVKAGDVVAVREKSKNQLRIAQALELCAQRGRVEWVEVDAEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARGD---LSADINESLIVELYSK 206


>gi|16331506|ref|NP_442234.1| 30S ribosomal protein S4 [Synechocystis sp. PCC 6803]
 gi|1350999|sp|P48939|RS4_SYNY3 RecName: Full=30S ribosomal protein S4
 gi|1001162|dbj|BAA10304.1| 30S ribosomal protein S4 [Synechocystis sp. PCC 6803]
          Length = 202

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+GE      KSP   R+Y PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGELPGLSRKSP--RRAYPPGQHGQARRKRSEY-AIRLEEKQKLRL 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+EK+     K+A R+ G T   L+  LE RLD  V+R     TI  ARQ V H H
Sbjct: 58  NYG-ITEKQLVRYVKKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVCHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+C+ GD++ V+ + +    V    +     +VP ++  + +      
Sbjct: 117 ITVNGQVVDIPSYQCRPGDIVSVRDRDRSRKLVETNMEFPGLANVPSHLEFDKNTFTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LV+E+YSR
Sbjct: 177 NSVIDR---EWVALQINELLVIEYYSR 200


>gi|326799154|ref|YP_004316973.1| ribosomal protein S4 [Sphingobacterium sp. 21]
 gi|326549918|gb|ADZ78303.1| ribosomal protein S4 [Sphingobacterium sp. 21]
          Length = 202

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+  E ++G  K  +  ++Y PG+HG  +R+ K S + +QL+ KQK K
Sbjct: 1   MARYTGPKSKIARKFREPIFGPDK-ALERKNYPPGMHGVSKRRGKQSEYAIQLQEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++F ++F +A    G T  NL+ FLE+RLD  V+R    PT   ARQ V H+
Sbjct: 60  YTYGVL-ERQFANLFDKAASKEGITGENLLKFLEARLDNTVFRLGIAPTRAGARQLVGHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ VNI SY  + GDVI V+++SK L +V+ +    +++   ++  + + +   F
Sbjct: 119 HITVNGQVVNIPSYSVRPGDVIAVRERSKTLEAVVNSVAGRKQNKYSWLEWDANGLTGKF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P+  +    P  ++  L+VE YS+
Sbjct: 179 LNYPNRDE---IPENIKEQLIVELYSK 202


>gi|168187786|ref|ZP_02622421.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
 gi|169294366|gb|EDS76499.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
          Length = 206

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HGQ RK   +Y G+QLR 
Sbjct: 1   MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR  +++A+  RG T  NL+  LE RLD +VY+  F  +   ARQ
Sbjct: 60  KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLKLLEMRLDNVVYKLGFGSSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY+   GDVI V++KS+        ++   + +P ++  N +N
Sbjct: 119 LVTHGHFLVNGKKVDIISYQVSAGDVISVREKSRGTEKFKTFAENP-KTLPAWLEGNIEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  P+    V   V +   L+VE YS+
Sbjct: 178 FEGKVIAEPTR---VDIDVPVNETLIVELYSK 206


>gi|296131863|ref|YP_003639110.1| ribosomal protein S4 [Thermincola sp. JR]
 gi|296030441|gb|ADG81209.1| ribosomal protein S4 [Thermincola potens JR]
          Length = 208

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  ++ R Y PG+HGQ RK    Y G+QLR 
Sbjct: 1   MARYTGPVCRLCRREGAKLYLKGDRCYSDKCAIDRRGYAPGMHGQGRKKISEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR+ F +ADR  G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKARRIYGVL-EKQFRNYFAKADRQPGVTGENLLRLLERRLDNVVYRLGFASSRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  VN + VNI SY  K GDVI++K+KS +L  + E  +  A +  P ++ ++ D
Sbjct: 119 LVRHGHFTVNDKKVNIPSYSLKVGDVIKIKEKSLELPRIKELLEQAAHKTPPAWLELDVD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   V IPS  +     V ++ +L+VE YSR
Sbjct: 179 QHLGKVVAIPSREE---IDVPIEEHLIVELYSR 208


>gi|163942386|ref|YP_001647270.1| 30S ribosomal protein S4 [Bacillus weihenstephanensis KBAB4]
 gi|229013860|ref|ZP_04170988.1| 30S ribosomal protein S4 [Bacillus mycoides DSM 2048]
 gi|229062341|ref|ZP_04199659.1| 30S ribosomal protein S4 [Bacillus cereus AH603]
 gi|229135493|ref|ZP_04264279.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST196]
 gi|229169382|ref|ZP_04297092.1| 30S ribosomal protein S4 [Bacillus cereus AH621]
 gi|226697804|sp|A9VKG5|RS4_BACWK RecName: Full=30S ribosomal protein S4
 gi|163864583|gb|ABY45642.1| ribosomal protein S4 [Bacillus weihenstephanensis KBAB4]
 gi|228614145|gb|EEK71260.1| 30S ribosomal protein S4 [Bacillus cereus AH621]
 gi|228647958|gb|EEL04007.1| 30S ribosomal protein S4 [Bacillus cereus BDRD-ST196]
 gi|228716946|gb|EEL68630.1| 30S ribosomal protein S4 [Bacillus cereus AH603]
 gi|228747529|gb|EEL97404.1| 30S ribosomal protein S4 [Bacillus mycoides DSM 2048]
          Length = 200

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 116/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SYR K    I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 ITVDGARVDIPSYRVKPNQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R     +       +   L+VEFYSR
Sbjct: 178 RHAERSE---LAAEINEALIVEFYSR 200


>gi|261378065|ref|ZP_05982638.1| ribosomal protein S4 [Neisseria cinerea ATCC 14685]
 gi|269145515|gb|EEZ71933.1| ribosomal protein S4 [Neisseria cinerea ATCC 14685]
          Length = 206

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHG-GKKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EA+R +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEAERRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + VNG+ VNI S++ K GDV+ +++K+K+   + EA  LA +  +P +++V+ + +
Sbjct: 119 SHKAIAVNGQVVNIPSFQVKVGDVVSIREKAKKQVRIQEALSLATQVGLPGWVAVDANKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P   +       +   LVVEFYS+
Sbjct: 179 EGVFKNMPDRAE---LTGDINEQLVVEFYSK 206


>gi|291514967|emb|CBK64177.1| SSU ribosomal protein S4P [Alistipes shahii WAL 8301]
          Length = 202

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M K    K KI R+ GE ++G  K  +  R+Y PG HG  R++ K S +G QL  KQK K
Sbjct: 1   MGKYIGPKSKIARKFGEAIYGADK-VLEKRNYPPGQHGLARKRKKVSEYGTQLSEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+F   +++A R  G T  NL+  LE RLD +VYR    PT  AARQ V+H 
Sbjct: 60  YTYG-LLEKQFSRTYEQAARMGGITGENLLKLLECRLDNVVYRLGIAPTRAAARQLVSHC 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  + GDV+ V++KSK L  +  +   + +    ++  ++ +M   F
Sbjct: 119 HICVNGSVVNIPSYSLRAGDVVSVREKSKSLEVISASLAGSSKSRYAWLEWDNASMSGRF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ P   +    P  ++  L+VE YS+
Sbjct: 179 LQKPEREE---IPENIKEQLIVELYSK 202


>gi|294674745|ref|YP_003575361.1| 30S ribosomal protein S4 [Prevotella ruminicola 23]
 gi|294473372|gb|ADE82761.1| ribosomal protein S4 [Prevotella ruminicola 23]
          Length = 202

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR GE ++G  K  ++ R++ PG HG  R+ K S + + L  KQK K 
Sbjct: 1   MARYLGPKSKIARRFGEPIFGADK-VLSRRNFPPGQHGNNRRRKMSEYAVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR++F++A ++ G T   L+  LESRLD +V+R    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFRNMFEKAAKAEGITGEVLLQNLESRLDNVVFRLGIAPTRAAARQLVGHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ VNI SY  K G V+ V++KSK L  +  A          +I  + +     F+
Sbjct: 119 ITVDGQVVNIPSYAVKPGQVVAVREKSKSLEVIEAALAGFNHSKYPWIEWDENVKGGKFL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|119946251|ref|YP_943931.1| ribosomal protein S4 [Psychromonas ingrahamii 37]
 gi|152060918|sp|A1SXW7|RS4A_PSYIN RecName: Full=30S ribosomal protein S4 A
 gi|119864855|gb|ABM04332.1| SSU ribosomal protein S4P [Psychromonas ingrahamii 37]
          Length = 206

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGVHGA-RKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KE+ R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKESARLQGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ VLVNG+ VNI S+  K  DVI +++K+K+ + +  A ++A +R+VP ++SV+   M
Sbjct: 119 SHKAVLVNGKVVNIPSFNVKASDVIAIREKAKKQSRIGAALEIAGQREVPTWVSVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +   L++E YS+
Sbjct: 179 EGVFTRQPERSD---LSAEINEQLIIELYSK 206


>gi|293602599|ref|ZP_06685042.1| 30S ribosomal protein S4 [Achromobacter piechaudii ATCC 43553]
 gi|292818971|gb|EFF78009.1| 30S ribosomal protein S4 [Achromobacter piechaudii ATCC 43553]
          Length = 207

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR + +NG + +I S   K GDV+ +++K+K+   + E+  LA    +P+++ V+   +
Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVVSIREKAKKQGRIKESLDLATSIGIPQWVEVDATKL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P           +  ++VVE YSR
Sbjct: 180 TGTFKSVPDRAD---VARDINESMVVELYSR 207


>gi|329893623|ref|ZP_08269757.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088]
 gi|328923550|gb|EGG30862.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088]
          Length = 206

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGARALESKCKLETAPGMHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I EK+FR  +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILEKQFRGYYKEAARRKGATGENLLQLLESRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ VLVNG  VN+ SY+ + GDV+ V++K+K+   +  A  LA +R   E+I VN D +
Sbjct: 119 SHKGVLVNGSVVNVPSYQVQPGDVVAVREKAKKQLRIQSAVALAGQRADIEWIDVNTDKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F   P   +       +  NL+VE YS+
Sbjct: 179 EGVFKARPERAELTS---EINENLIVELYSK 206


>gi|325267152|ref|ZP_08133820.1| 30S ribosomal protein S4 [Kingella denitrificans ATCC 33394]
 gi|324981390|gb|EGC17034.1| 30S ribosomal protein S4 [Kingella denitrificans ATCC 33394]
          Length = 206

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  + ++      PG HG  +K + S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLYLKSARRSLESKCKMDSAPGQHGA-KKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + VNG+ VNI S++ K GDV+ V++K+K+   + EA  LA +  +P +++V+   +
Sbjct: 119 SHKALTVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEAMGLATQIGLPSWVAVDASKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P   +       +   LVVEFYS+
Sbjct: 179 EGTFKNVPDRAELYS---DINEQLVVEFYSK 206


>gi|114567813|ref|YP_754967.1| 30S ribosomal protein S4 [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317309|sp|Q0AUK8|RS4_SYNWW RecName: Full=30S ribosomal protein S4
 gi|114338748|gb|ABI69596.1| SSU ribosomal protein S4P [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 209

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +   S  +  RR GE L+ +       K  V+ R+Y PG HGQ R+ KPS +G+QLR 
Sbjct: 1   MGRYTDSVCRQCRREGEKLFLKGDRCYSEKCSVSRRAYPPGAHGQGRRQKPSEYGIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I EK+FR+ F++ADR +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 61  KQKTRRIYG-IQEKQFRNYFRKADRKQGITGDNLLVLLERRLDNVVYRLGFASSRKEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHD 173
            VNH H  +NG   NI S   + GD+IEV+Q S++     E   Q A +  PE++SV+ +
Sbjct: 120 LVNHGHFFINGHKANIPSMLVRVGDIIEVRQSSRESNKFQEMKEQAAYKTPPEWLSVDAE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M  T +  P   +      ++   L+VE YSR
Sbjct: 180 KMTGTVLAYPRREQ---IDTLVNEQLIVELYSR 209


>gi|332040528|gb|EGI76904.1| 30S ribosomal protein S4 [Hylemonella gracilis ATCC 19624]
          Length = 207

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 84/214 (39%), Positives = 130/214 (60%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S FGLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSISDKAKFDSK---PGQHGRISGARTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F++A + +G++  NL+S LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-ERQFRRYFEQASQRKGNSGANLLSLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG++VNI SY  + GDVI V++KSK+   V+EA QLA++   P ++ VN 
Sbjct: 117 QLVSHKAITVNGQAVNIPSYMVQAGDVIAVREKSKKQNRVVEALQLAQQVGFPAWVEVNV 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D     F + P   +   +   +  +L+VE YSR
Sbjct: 177 DKAEGAFKKAPDRDE---FGSDINESLIVELYSR 207


>gi|224543759|ref|ZP_03684298.1| hypothetical protein CATMIT_02975 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523327|gb|EEF92432.1| hypothetical protein CATMIT_02975 [Catenibacterium mitsuokai DSM
           15897]
          Length = 201

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 114/206 (55%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G ++    K  +N R Y PG HGQ+R     Y GLQL  KQK++ 
Sbjct: 1   MARYTGPIWKKSRRLGFSVLENGKE-LNKRPYAPGQHGQKRHKSTEY-GLQLAEKQKVRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+EK+F + F  A +  G T  N +  LESRLD +VYR  F  T  AARQ VNH H
Sbjct: 59  MYG-INEKQFHNTFDRASKMEGVTGANFLFLLESRLDNVVYRMGFATTRRAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L+NG   +I S R   GDVI VK++S+QL  +  A + A+   P ++ V+ +     F 
Sbjct: 118 ILLNGIKTDIPSCRVNPGDVITVKERSQQLDVIKTALE-AQTHTPGFVEVDAEKRTGKFT 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   L+VE+Y+R
Sbjct: 177 RLPERSE---LNQEINEQLIVEYYNR 199


>gi|119947102|ref|YP_944782.1| ribosomal protein S4 [Psychromonas ingrahamii 37]
 gi|152060920|sp|A1T0B8|RS4B_PSYIN RecName: Full=30S ribosomal protein S4 B
 gi|119865706|gb|ABM05183.1| SSU ribosomal protein S4P [Psychromonas ingrahamii 37]
          Length = 206

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGVHGA-RKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KE+ R +G+T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKESARLQGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ VLVNG+ VNI S+  K  DVI +++K+K+ + +  A ++A +R+VP ++SV+   M
Sbjct: 119 SHKAVLVNGKVVNIPSFNVKASDVIAIREKAKKQSRIGAALEIAGQREVPTWVSVDATKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +   L++E YS+
Sbjct: 179 EGIFTRQPERSD---LSAEINEQLIIELYSK 206


>gi|256821686|ref|YP_003145649.1| 30S ribosomal protein S4 [Kangiella koreensis DSM 16069]
 gi|256795225|gb|ACV25881.1| ribosomal protein S4 [Kangiella koreensis DSM 16069]
          Length = 206

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +     + T+      PG HG  R+S+ S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGVDLGHKSGVRAIETKCKIEVAPGQHGA-RRSRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEADR +G T  NL+  LESRLD +VYR  +  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEADRLKGATGVNLLQLLESRLDNVVYRMGYAATRGEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ +L+NG +VNI SY  K  DV+ V++KS++ A ++ A +L A+RD PE+I V+   M
Sbjct: 119 SHKAILINGETVNIPSYTVKAEDVVSVREKSQKQARIVAALELAAQRDKPEWIEVDGKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P   +       +  NL+VE YS+
Sbjct: 179 EGQFKRVPERSE---LDASINENLIVELYSK 206


>gi|118444508|ref|YP_877226.1| 30S ribosomal protein S4 [Clostridium novyi NT]
 gi|152060917|sp|A0PXX4|RS4A_CLONN RecName: Full=30S ribosomal protein S4 A
 gi|118134964|gb|ABK62008.1| ribosomal protein S4 [Clostridium novyi NT]
          Length = 206

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HGQ RK   +Y G+QLR 
Sbjct: 1   MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR  +++A+  RG T  NL+  LE RLD +VY+  F  +   ARQ
Sbjct: 60  KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLKLLEMRLDNVVYKLGFGSSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY+   GDVI V++KS+        ++   + +P ++  N +N
Sbjct: 119 LVTHGHFLVNGKKVDIISYQVSAGDVISVREKSRGTEKFKTFAENP-KTLPAWLEGNIEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  P+        V +   L+VE YS+
Sbjct: 178 FEGKVIAEPTRAD---IDVPVNETLIVELYSK 206


>gi|210623214|ref|ZP_03293653.1| hypothetical protein CLOHIR_01603 [Clostridium hiranonis DSM 13275]
 gi|210153751|gb|EEA84757.1| hypothetical protein CLOHIR_01603 [Clostridium hiranonis DSM 13275]
          Length = 207

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR G  L+ +       K  ++ R+Y PG HGQ RK K S +G QLR 
Sbjct: 1   MARYTGASCRQCRREGMKLFLKGDRCYTDKCALDRRNYAPGQHGQGRK-KVSNYGEQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR++++ A++  G T  NL+S LE RLD +VYR     +   ARQ
Sbjct: 60  KQKVKRIYGVL-ETQFRNLYERAEKMPGKTGANLLSLLERRLDNVVYRMGLAASRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  +NG+ V+I S     GDVI VK+ SK  A      +   R  P ++  N D 
Sbjct: 119 LVTHAHFTLNGKKVDIPSLTVNVGDVIAVKETSKSSAKFKALVENNTRIAPNWLENNLDE 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           M A  V +P+        + +  +L++E YS+
Sbjct: 179 MCAKVVSLPTR---EDIDLEIAEHLIIELYSK 207


>gi|145219087|ref|YP_001129796.1| 30S ribosomal protein S4 [Prosthecochloris vibrioformis DSM 265]
 gi|189045392|sp|A4SCT5|RS4_PROVI RecName: Full=30S ribosomal protein S4
 gi|145205251|gb|ABP36294.1| SSU ribosomal protein S4P [Chlorobium phaeovibrioides DSM 265]
          Length = 203

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R + PG HGQ R+SK S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGIALTPKAEKYMERRPFAPGQHGQGRRSKVSEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR+ +K+A   RG T  NL+  +E R D +V+RA F P+   +RQ V+H H
Sbjct: 61  LYG-ILEKQFRNYYKKAVSQRGVTGDNLVRLIERRFDNVVFRAGFAPSRAGSRQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI SY    GD+IE + KSK +++V +A     +  +P +I V+  N  A F
Sbjct: 120 LLVNGKKVNIPSYMVSPGDLIEFRPKSKNMSAVSDALSKTPDARIPSWIQVDKANQKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P  ++           LVVE YS+
Sbjct: 180 LAVPERVE---VQEPFNEQLVVELYSK 203


>gi|119713262|gb|ABL97328.1| ribosomal protein S4 [uncultured marine bacterium HF10_12C08]
          Length = 205

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 121/206 (58%), Positives = 155/206 (75%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+KR + KHKIDRR+  NLWGRPKSP N R Y PG HGQ+   K S +G+QL AKQK+K 
Sbjct: 1   MTKRVAQKHKIDRRLSVNLWGRPKSPFNLRKYRPGQHGQKHTGKLSDYGVQLNAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG+++E++FR+ +KEA R +GD+  NLI+ LE RLDTIVYR+KFVPT+FAARQF+NH H
Sbjct: 61  YYGNLNERQFRNCYKEAIRQKGDSGENLIAILERRLDTIVYRSKFVPTVFAARQFINHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ VNI S   KEGDV+EVK KSK++A V+E+ +  ERD+P YI+V+     +TFV
Sbjct: 121 VKVNGKRVNIASCLLKEGDVVEVKDKSKEMALVVESMKSQERDIPGYITVDEKKCSSTFV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P    +VPY   M P LV+E+YSR
Sbjct: 181 RTPQ-FAEVPYATQMDPKLVIEYYSR 205


>gi|170016575|ref|YP_001727494.1| ribosomal protein S4 [Leuconostoc citreum KM20]
 gi|226699084|sp|B1MWZ8|RS4_LEUCK RecName: Full=30S ribosomal protein S4
 gi|169803432|gb|ACA82050.1| Ribosomal protein S4 [Leuconostoc citreum KM20]
          Length = 203

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 122/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K +I RR+G +L G  K  ++ R+Y PG HG  R++K S +G+QLR KQK++ 
Sbjct: 1   MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGMQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F +A + R  T   N +  LE RLD++VYR  F  T   ARQ VNH 
Sbjct: 60  TYG-LTERQFHALFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGFATTRQQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H++V+G+ V+I SY    G V+ V+ KSK +  +  A +      P+++S + + +  + 
Sbjct: 119 HIMVDGKRVDIPSYNVTPGQVVSVRDKSKNIVPIQAAVESVVAR-PQFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   L+VE+Y+R
Sbjct: 178 VRLPEREE---LDADLNEALIVEYYNR 201


>gi|88704352|ref|ZP_01102066.1| 30S ribosomal protein S4 [Congregibacter litoralis KT71]
 gi|88701403|gb|EAQ98508.1| 30S ribosomal protein S4 [Congregibacter litoralis KT71]
          Length = 206

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGVRSLESKCKPESVPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRIGFGSTRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
            H+ +LVNG+ VNI SY+ K GDV+ +++K+K+   V  A  L A+R  PE+I VN + +
Sbjct: 119 AHKAILVNGKVVNIASYKVKAGDVVSLREKAKKQLRVQSAMALAAQRGEPEWIDVNVEKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            A +   P   +       +  NL+VE YS+
Sbjct: 179 EAVYKAAPDRQELTS---EINENLIVELYSK 206


>gi|255536129|ref|YP_003096500.1| 30S ribosomal protein S4 [Flavobacteriaceae bacterium 3519-10]
 gi|255342325|gb|ACU08438.1| SSU ribosomal protein S4p (S9e) [Flavobacteriaceae bacterium
           3519-10]
          Length = 202

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG--QRRKSKPSYFGLQLRAKQKM 58
           M++    K KI R+ G  ++G  K+    ++  PG HG  +RR SK S + +QL  KQK 
Sbjct: 1   MARYIGPKTKIARKFGAAIYGDDKNFEKRKNQPPGQHGVNKRRGSKKSEYAVQLMEKQKA 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I E++F +++++A R++G T   L+   ESRLD +VYR  F  T   ARQ V+H
Sbjct: 61  KYTYG-ILERQFANLYEKAQRAKGVTGEVLLQLCESRLDNVVYRLGFGKTRAGARQLVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
           RHV VNG  VNI SY  K GDVI +++KSK L  +  A  LA +   E++  N +    T
Sbjct: 120 RHVTVNGELVNIPSYLLKAGDVIAIREKSKSLEVI--ADSLAGKANYEWLQFNDEKKEGT 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           FV  P     +  P  ++  L+VE YS+
Sbjct: 178 FVSAPER---IQIPEDIKEQLIVELYSK 202


>gi|164686553|ref|ZP_02210581.1| hypothetical protein CLOBAR_00120 [Clostridium bartlettii DSM
           16795]
 gi|164604422|gb|EDQ97887.1| hypothetical protein CLOBAR_00120 [Clostridium bartlettii DSM
           16795]
          Length = 206

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR G  L+ +       K  +  R+Y PG HGQ RK   +Y GLQLR 
Sbjct: 1   MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRKKLSNY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR++++ A++  G T  NL+  LE RLD +V+R     +   ARQ
Sbjct: 60  KQKVKRIYGVL-ETQFRNLYERAEKMSGKTGENLLCLLEERLDNVVFRMGLANSRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  +NG+ V+I S   K GDVI VK+ SK  A      + A +  P ++ VN + 
Sbjct: 119 LVTHAHFTLNGKKVDIPSLTVKVGDVIAVKETSKSSAKFKALVE-ANKVAPNWLDVNLEE 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           M A  V +P+        + +  +L++E YS+
Sbjct: 178 MSAKVVALPTR---EDIDIEIAEHLIIELYSK 206


>gi|307823465|ref|ZP_07653694.1| ribosomal protein S4 [Methylobacter tundripaludum SV96]
 gi|307735450|gb|EFO06298.1| ribosomal protein S4 [Methylobacter tundripaludum SV96]
          Length = 206

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ + +   +  +      PG HG  ++++ S + +QLRAKQ
Sbjct: 1   MARYLGPTCKLSRREGTDLFLKSRGKSLENKCKLDQRPGQHG-TKRARSSDYAIQLRAKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           ++++ YG I EK+FR+ +K AD  +G T  NL++ LESRLD +VYR  F  T   ARQ V
Sbjct: 60  RLRRIYG-ILEKQFRNYYKTADLKKGATGQNLLNLLESRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ + VN   +N+ SY+   GDV+ V++K+K+   +++A  + E+   P ++ VN  +M
Sbjct: 119 SHKSIQVNNVLINVPSYQVSPGDVLTVREKAKKQQRIVDALVVTEQYGFPSWVEVNSKSM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P     V     +   LVVE YS+
Sbjct: 179 SGTFSSLPDR---VDLGSDINEQLVVELYSK 206


>gi|206900118|ref|YP_002250727.1| ribosomal protein S4 [Dictyoglomus thermophilum H-6-12]
 gi|226732178|sp|B5YDW9|RS4_DICT6 RecName: Full=30S ribosomal protein S4
 gi|206739221|gb|ACI18279.1| ribosomal protein S4 [Dictyoglomus thermophilum H-6-12]
          Length = 206

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 14/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K P   R + PG HG+ ++    Y GL+LR 
Sbjct: 1   MARYTGPDCRLCRREGMKLFLKGTKCFSEKCPFERRPFAPGQHGRAQRKLTEY-GLRLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ+ K+ YG + E++FR  F+ A + RG T   L+  LE+RLD +VYR  +  +   ARQ
Sbjct: 60  KQRAKRIYGVL-ERQFRRYFEIASKGRGVTGERLLQLLETRLDNVVYRLGWALSRDQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H  + VNG+ VNI SY  K GDV+E+    K L  V EA      ++VP ++ ++ +
Sbjct: 119 LVSHGKIAVNGKRVNIPSYNLKPGDVVELLD--KDLIPVQEAISVFGNKNVPAWLELDRE 176

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N     +R+P   +       +Q  L+VEFYSR
Sbjct: 177 NFRGRVLRLPKREE---IDTPVQEQLIVEFYSR 206


>gi|219666517|ref|YP_002456952.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense DCB-2]
 gi|254764585|sp|B8G1Z3|RS4_DESHD RecName: Full=30S ribosomal protein S4
 gi|219536777|gb|ACL18516.1| ribosomal protein S4 [Desulfitobacterium hafniense DCB-2]
          Length = 208

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  ++ R+Y PG HGQ R  KP+ +G+QLR 
Sbjct: 1   MARYTGPVCRLCRREGMKLFLKGDRCYTGKCAIDRRAYAPGQHGQSRGKKPTEYGIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+FRS + +A+R +G    NL+  LE RLD +V++  F  +   ARQ
Sbjct: 61  KQKVRRIYG-VQEKQFRSYYDKANRQKGIVGENLLRLLERRLDNVVFQLGFATSRPEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  +NGR V+I S+  + GDV+ VK+ SK    + E     +R  P+++S++ + 
Sbjct: 120 LVRHGHFTINGRRVDIPSFLVRVGDVVGVKEASKSSPRLKEILSSLDRTPPKWMSLDANA 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              T + +P   +D+  P  +Q +L+VE YSR
Sbjct: 180 ATGTIIALPDR-EDIQLP--IQEHLIVEKYSR 208


>gi|146297258|ref|YP_001181029.1| ribosomal protein S4 [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|172046028|sp|A4XLQ3|RS4_CALS8 RecName: Full=30S ribosomal protein S4
 gi|145410834|gb|ABP67838.1| SSU ribosomal protein S4P [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 208

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MSK      ++ RR G  L+ +       K     R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFAKRPYPPGQHGQERKKLSEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H H  VNG++VNI SY    GDVIEVK+KSK     +E  +  A+R  P+++  + +
Sbjct: 119 LVSHAHFKVNGKTVNIPSYLVDVGDVIEVKEKSKSKPRFIEIKEKYAKRPSPKWLEKDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   + +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGKVIALPTR-EDIDMP--IKEHLIVELYSK 208


>gi|294789218|ref|ZP_06754457.1| ribosomal protein S4 [Simonsiella muelleri ATCC 29453]
 gi|294482959|gb|EFG30647.1| ribosomal protein S4 [Simonsiella muelleri ATCC 29453]
          Length = 206

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  + ++      PG HG  +KS+ S +GLQLR KQ
Sbjct: 1   MARYLGPKCKLARREGTDLYLKSARRSLESKCKMESAPGQHGA-KKSRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG+ VNI S++ K GDV+ V++K+K+   + EA  L A+  +P ++SV+ + M
Sbjct: 119 SHKALTVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALGLAAQIGMPSWVSVDANKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P   +       +   LVVEFYS+
Sbjct: 179 EGTFKNVPDRAELYS---DINEQLVVEFYSK 206


>gi|73662353|ref|YP_301134.1| 30S ribosomal protein S4 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82581622|sp|Q49YF2|RS4_STAS1 RecName: Full=30S ribosomal protein S4
 gi|72494868|dbj|BAE18189.1| 30S ribosomal protein S4 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 200

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG  ++ K S + LQLR KQK++ 
Sbjct: 1   MARFRGSNWKKSRRLGISLSGTGKE-LEKRPYAPGQHGPNQRKKLSEYALQLREKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR+ F+ A    G    N +  L +RLD +VY      T   ARQ VNH H
Sbjct: 60  LYG-MTERQFRNTFEIAGNQHGVHGENFMQLLAARLDAVVYSLGLARTRRQARQIVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY  K G  I V++KS +L  + E+ ++    VP+Y+  + DN+   ++
Sbjct: 119 IEVDGKRVDIPSYTLKPGQEISVREKSLKLDIIAESVEI-NNFVPDYLEFDADNLKGKYI 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P  +   L+VE+YSR
Sbjct: 178 RVPERSE---LPAEINEQLIVEYYSR 200


>gi|261405769|ref|YP_003242010.1| 30S ribosomal protein S4 [Paenibacillus sp. Y412MC10]
 gi|329922609|ref|ZP_08278161.1| ribosomal protein S4 [Paenibacillus sp. HGF5]
 gi|261282232|gb|ACX64203.1| ribosomal protein S4 [Paenibacillus sp. Y412MC10]
 gi|328941951|gb|EGG38234.1| ribosomal protein S4 [Paenibacillus sp. HGF5]
          Length = 200

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR+G +L G  K  +  R + PG HG  ++ K S +G+QL+ KQK++ 
Sbjct: 1   MARYTGPKFKLSRRLGISLSGTGKE-LAKRPFPPGQHGPNQRRKVSNYGMQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F +A   +G    N +  LESRLD +VYR  F  +   ARQ V H H
Sbjct: 60  MYG-LGEKQFRTLFNKATSMKGIAGENFMFLLESRLDNLVYRLGFSNSRAGARQLVAHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SY    GDVI ++++S+ L+S+ EA       +P Y+  +   M   ++
Sbjct: 119 VTVNGKKVDIASYAVSTGDVIGLRERSRSLSSIKEALA-NRVHLPAYLEFDEAAMEGKYI 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFY+R
Sbjct: 178 RLPERSE---LSQDIDEKQIVEFYNR 200


>gi|288906416|ref|YP_003431638.1| Ribosomal protein S4 [Streptococcus gallolyticus UCN34]
 gi|306832453|ref|ZP_07465605.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979478|ref|YP_004289194.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733142|emb|CBI14723.1| Ribosomal protein S4 [Streptococcus gallolyticus UCN34]
 gi|304425353|gb|EFM28473.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179406|emb|CBZ49450.1| 30S ribosomal protein S4 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 203

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKIKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGHPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VE+Y++
Sbjct: 178 TRLPERDE---INPEINEALIVEYYNK 201


>gi|74316447|ref|YP_314187.1| 30S ribosomal protein S4 [Thiobacillus denitrificans ATCC 25259]
 gi|90101734|sp|Q3SLM5|RS4_THIDA RecName: Full=30S ribosomal protein S4
 gi|74055942|gb|AAZ96382.1| ribosomal protein S4 [Thiobacillus denitrificans ATCC 25259]
          Length = 209

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R+Y PG HGQ+  ++ S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQKSGARLSGYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR  +K AD  +G T  NL+S LESRLD++ YR  F  +   ARQ
Sbjct: 61  KQKIRRIYGVL-EGQFRLTYKRADSRKGVTGENLLSMLESRLDSVCYRMGFGASRTEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H  ++VNGR VNI SY+ + GDV+EV +KSK    +  A+   A R  PE+I V+  
Sbjct: 120 IVRHNGIVVNGRRVNIPSYQVRPGDVVEVAEKSKAQLRIKAAADATATRGYPEWIEVDAK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  T+   P   +    P  +  +LVVE YS+
Sbjct: 180 ALKGTYKAHPQRSE---LPSTINESLVVELYSK 209


>gi|27262234|gb|AAN87398.1| SSU ribosomal protein S4 [Heliobacillus mobilis]
          Length = 208

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  V+ R+Y PG HGQ RK    Y GLQLR 
Sbjct: 1   MARYTGPVCRLCRREGAKLYLKGDRCYTGKCAVDRRTYAPGQHGQGRKKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR+ F +ADR +G T HNL+  LE RLD +V+R  F  +   ARQ
Sbjct: 60  KQKARRIYG-ILEGQFRTYFSKADRQQGITGHNLLRLLERRLDNVVFRLGFARSRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
           FV H H  +NG  VNI S + + GDVI++K+KSK      E  + L ++  P ++ ++ +
Sbjct: 119 FVLHNHFTLNGHKVNIASIQLRVGDVIQLKEKSKDTPLFKEIVASLGQKTPPAWLELDVN 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+    V +P+          +Q +L+VE YSR
Sbjct: 179 NLSGRVVALPNR---EDIDTTVQEHLIVELYSR 208


>gi|227538693|ref|ZP_03968742.1| ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241612|gb|EEI91627.1| ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33300]
          Length = 202

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+  E ++G  K  +  ++Y PG HG  +R+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKSKIARKFREPIFGPDK-ALEKKNYPPGQHGPSKRRGKQSEYAIQLLEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++F ++F +A   +G T  N +  LE+RLD  VYR    PT  AARQ V+H+
Sbjct: 60  YTYGVL-ERQFSNLFVKAAAKQGITGENFLKLLEARLDNTVYRLGIAPTRAAARQLVSHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  + GDVI V+++S+ L +V  + +  + +   ++  N +    TF
Sbjct: 119 HITVNGGVVNIPSYSLRPGDVIAVRERSQSLEAVTTSVEGRKINKFAWLEWNANEFKGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P        P  ++ NL+VE YS+
Sbjct: 179 LSYPERTD---IPENIKENLIVELYSK 202


>gi|325280942|ref|YP_004253484.1| ribosomal protein S4 [Odoribacter splanchnicus DSM 20712]
 gi|324312751|gb|ADY33304.1| ribosomal protein S4 [Odoribacter splanchnicus DSM 20712]
          Length = 202

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  K  +  R+Y  G HG  RR+ K S +G+QL+ KQK K
Sbjct: 1   MARYTGPKSKIARKFGEPIYGPDK-ALERRNYPSGQHGLARRRRKISEYGVQLKEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+FR +F++A+R+ G T   L+  LE RLD +VYR    PT  AARQ V+HR
Sbjct: 60  YTYG-LLEKQFRILFEKAERAGGVTGEVLLQMLECRLDNVVYRLGIAPTRAAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG   NI S   K GDV+ V++KSK L  V ++ +        ++  +  +M    
Sbjct: 119 HITVNGGVCNIPSAAVKAGDVVAVREKSKALEVVADSLRSNRVSKYSWLEWDGASMSGKL 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P        P  ++  L+VE YS+
Sbjct: 179 LNVPERSD---IPENIKEQLIVELYSK 202


>gi|237749539|ref|ZP_04580019.1| small subunit ribosomal protein S4 [Oxalobacter formigenes OXCC13]
 gi|229380901|gb|EEO30992.1| small subunit ribosomal protein S4 [Oxalobacter formigenes OXCC13]
          Length = 207

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 129/211 (61%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG +  ++ S +G QLR KQ
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDTKPGQHGAKSGARTSDYGNQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG I E++FR  F EA+R +G+T  NL+  LESRLD +VYR  F  T   +RQ V
Sbjct: 61  KVKRMYG-ILERQFRRYFAEAERRKGNTGDNLMQLLESRLDNVVYRMGFGSTRAESRQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI SY  K  DVI +++KSK+   ++E+  LAE+  + +++SV+   M
Sbjct: 120 SHQALMVNGKVVNIPSYLVKPEDVITIREKSKKQNRIVESLSLAEQIGMADWVSVDSKKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F RIP   +   +   +  +L++E YSR
Sbjct: 180 EGVFKRIPDRSE---FANDVNESLIIELYSR 207


>gi|187476573|ref|YP_784597.1| 30S ribosomal protein S4 [Bordetella avium 197N]
 gi|123515214|sp|Q2L242|RS4_BORA1 RecName: Full=30S ribosomal protein S4
 gi|115421159|emb|CAJ47643.1| 30S ribosomal protein S4 [Bordetella avium 197N]
          Length = 207

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 122/211 (57%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +GLQLR KQ
Sbjct: 1   MARYTGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR + +NG + +I S   K GDVI V++ +K+ A + E+  LA    +P+++ V+ + M
Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVITVREGAKKQARIRESLDLAASIGIPQWVEVDSNKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P           +  ++VVE YSR
Sbjct: 180 TGTFKSPPDRAD---VARDVNESMVVELYSR 207


>gi|125975412|ref|YP_001039322.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405]
 gi|256005301|ref|ZP_05430267.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360]
 gi|281419374|ref|ZP_06250389.1| ribosomal protein S4 [Clostridium thermocellum JW20]
 gi|152060944|sp|A3DJK0|RS4_CLOTH RecName: Full=30S ribosomal protein S4
 gi|125715637|gb|ABN54129.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405]
 gi|255990737|gb|EEU00853.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360]
 gi|281406994|gb|EFB37257.1| ribosomal protein S4 [Clostridium thermocellum JW20]
 gi|316939528|gb|ADU73562.1| ribosomal protein S4 [Clostridium thermocellum DSM 1313]
          Length = 208

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR GE L+ +       K  +  R Y PG HGQ +K    Y GLQLR 
Sbjct: 1   MARYTGASCRLCRREGEKLYLKGERCTTNKCAIARRGYAPGQHGQNKKKLSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++YYG I E +FR  F+ A + +G T  NL+  LESRLD +VYR     +   ARQ
Sbjct: 60  KQKARRYYG-ILEGQFRRYFEMAVKKKGITGENLLQILESRLDNVVYRMGLAVSRREARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  VNG+ V+I SY  K GDVI VK+KSK    +    +  A R  P+++  + +
Sbjct: 119 LVRHGHFTVNGKRVDIPSYLVKVGDVIAVKEKSKSSPKMQSNKEYAAGRPRPKWLEYDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M    V +P+  +D+  P  ++ NL+VE YS+
Sbjct: 179 EMSGKVVALPAR-EDIDLP--IRENLIVELYSK 208


>gi|296111082|ref|YP_003621463.1| 30S ribosomal protein S4 [Leuconostoc kimchii IMSNU 11154]
 gi|295832613|gb|ADG40494.1| 30S ribosomal protein S4 [Leuconostoc kimchii IMSNU 11154]
          Length = 203

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K +I RR+G +L G  K  ++ R+Y PG HG  R++K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKVSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F S+F +A + R  T   N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 60  TYG-LTERQFHSLFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGLATTRQQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I S+    G VI V+ KSK +  +  A +      P+++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSFSVTPGQVISVRDKSKTIVPIQVAVESVVAH-PQFVSFDSEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   L+VE+Y+R
Sbjct: 178 VRLPEREE---LDADINEALIVEYYNR 201


>gi|90962052|ref|YP_535968.1| 30S ribosomal protein S4 [Lactobacillus salivarius UCC118]
 gi|301300890|ref|ZP_07207062.1| ribosomal protein S4 [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|122448841|sp|Q1WT66|RS4_LACS1 RecName: Full=30S ribosomal protein S4
 gi|90821246|gb|ABD99885.1| SSU ribosomal protein S4P [Lactobacillus salivarius UCC118]
 gi|300214749|gb|ADJ79165.1| 30S ribosomal protein S4 [Lactobacillus salivarius CECT 5713]
 gi|300851489|gb|EFK79201.1| ribosomal protein S4 [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 201

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  ++ R Y PG HGQ R+   S +GLQLR KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGFSLSGTGKE-LSRRPYAPGQHGQDRRGSLSEYGLQLREKQKLRM 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++FK A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  TYG-LTERQFSNLFKRAGKIREGKHGDNFMILLERRLDNVVYRLGLASTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI ++++SK L  V EA +     VP +++ + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVEPGQVISLRERSKDLQIVKEALEAVVGRVP-FVNFDENKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   LVVEFY+R
Sbjct: 178 VRLPDREE---LDANIDEALVVEFYNR 201


>gi|116491377|ref|YP_810921.1| SSU ribosomal protein S4P [Oenococcus oeni PSU-1]
 gi|116092102|gb|ABJ57256.1| SSU ribosomal protein S4P [Oenococcus oeni PSU-1]
          Length = 262

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    K ++ RR+G +L G  K  +  R Y PG HG   R+ K S +  QLR KQK++
Sbjct: 59  MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 117

Query: 60  KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
             YG +SE++F ++F +A +  +G    N    LE+RLD++V+R     T   ARQ VNH
Sbjct: 118 FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 176

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+LV+G+ V I SY  K G +I V+++SK++  +L + + +  + P ++  + D +   
Sbjct: 177 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 235

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R P   +       +  +L+VE+Y+R
Sbjct: 236 LTRYPEREE---LGADINESLIVEYYNR 260


>gi|227891072|ref|ZP_04008877.1| 30S ribosomal protein S4 [Lactobacillus salivarius ATCC 11741]
 gi|227866946|gb|EEJ74367.1| 30S ribosomal protein S4 [Lactobacillus salivarius ATCC 11741]
          Length = 201

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  ++ R Y PG HGQ R+   S +GLQLR KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGFSLSGTGKE-LSRRPYAPGQHGQDRRGSLSEYGLQLREKQKLRM 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++FK A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  TYG-LTERQFSNLFKRAGKIREGKHGDNFMILLERRLDNVVYRLGLASTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI ++++SK L  V EA +     VP +++ + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVEPGQVISLRERSKDLQIVKEALEAVVSRVP-FVNFDENKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   LVVEFY+R
Sbjct: 178 VRLPDREE---LDANIDEALVVEFYNR 201


>gi|110833282|ref|YP_692141.1| 30S ribosomal protein S4 [Alcanivorax borkumensis SK2]
 gi|123149715|sp|Q0VSH9|RS4_ALCBS RecName: Full=30S ribosomal protein S4
 gi|110646393|emb|CAL15869.1| 30S ribosomal protein S4 [Alcanivorax borkumensis SK2]
          Length = 210

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 12/214 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQ------RRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +    P+ ++       GQ      RR ++ S +G+QLR
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGIRPLESKCKADQAPGQAAGASGRRPARLSDYGVQLR 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+++ YG + EK+FRS +K+A  S+G T   L+  LE RLD +VYR  F  T   AR
Sbjct: 61  EKQKVRRTYGVL-EKQFRSYYKKAAASKGATGEVLLQLLEGRLDNVVYRMGFGSTRSEAR 119

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNH 172
           Q V+HR +LVNG+SVN+ SY+ K GD I V++KSK    V  A +LA +R    +I V+ 
Sbjct: 120 QLVSHRAILVNGQSVNVASYQVKPGDQINVREKSKNQLRVKNAMELAQQRGFMPWIEVDD 179

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  T+   P     +  P  +  NL+VE YS+
Sbjct: 180 KKLEGTYKAKPER---IDLPAEINENLIVELYSK 210


>gi|300775038|ref|ZP_07084901.1| 30S ribosomal protein S4 [Chryseobacterium gleum ATCC 35910]
 gi|300506853|gb|EFK37988.1| 30S ribosomal protein S4 [Chryseobacterium gleum ATCC 35910]
          Length = 202

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 86/208 (41%), Positives = 119/208 (57%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQKM 58
           M++    K KI R+ G  ++G  K+    ++  PG HG   RR +K S + +QL  KQK 
Sbjct: 1   MARYIGPKTKIARKFGAAIYGDDKNFEKRKNQPPGQHGPNKRRGAKKSEYAVQLAEKQKA 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I E++F ++F +A RS+G T   L+   ESRLD +VYR  F  T  AARQ V+H
Sbjct: 61  KYTYG-ILERQFANLFDKAHRSKGVTGEVLLQLCESRLDNVVYRFGFAKTRSAARQLVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
           RH+ VNG  +NI SY  K GDVI V++KSK L  V  A  LA +   E++  N +    T
Sbjct: 120 RHITVNGEILNIPSYLVKAGDVIAVREKSKSLEVVTNA--LASKSNYEWLQFNDEKKEGT 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           FV  P     +  P  ++ NL+VE YS+
Sbjct: 178 FVSAPER---IQIPEDIKENLIVELYSK 202


>gi|319955881|ref|YP_004167144.1| SSU ribosomal protein s4p [Nitratifractor salsuginis DSM 16511]
 gi|319418285|gb|ADV45395.1| SSU ribosomal protein S4P [Nitratifractor salsuginis DSM 16511]
          Length = 208

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    + K++RR+G +L  +       KS +  R Y PG HGQ R++K S +GLQLR 
Sbjct: 1   MARYRGPREKLERRLGVDLGLKGERRLAGKSALEKRPYPPGQHGQ-RRTKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FRSIF+EA+R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRSIFQEANRLEGNTGELLIQLLEQRLDNVVYRMGFATTRAFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            VNH HVLV+G+ V+I SYR K G  IE+++KSK    +  + +L  +  + E++ V+ +
Sbjct: 119 LVNHGHVLVDGKRVDIPSYRVKPGQKIEIREKSKNNPQIQRSVELTNQTGIVEWVDVDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F RIP   +     + ++  L+VE YS+
Sbjct: 179 KLFGIFTRIPEREE---ISIPVEERLIVELYSK 208


>gi|209524168|ref|ZP_03272718.1| ribosomal protein S4 [Arthrospira maxima CS-328]
 gi|209495259|gb|EDZ95564.1| ribosomal protein S4 [Arthrospira maxima CS-328]
          Length = 202

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+G+      K+    R+Y PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVARRLGDLPGLTRKTA--RRAYPPGQHGQARRKRSEY-AVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     ++A R+ G T   L+ +LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-LSERQLLRYVRKARRASGSTGQVLLQYLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+C+ G+ I V+ + K    V    Q     +VP ++ ++ +N+ AT 
Sbjct: 117 ITVNGKVVDIASYQCRPGETIGVRNRDKSREMVKANLQYPGLANVPSHLELDKNNLTATV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIER---EWVALSINELLVVEYYSR 200


>gi|77461277|ref|YP_350784.1| 30S ribosomal protein S4 [Pseudomonas fluorescens Pf0-1]
 gi|90101709|sp|Q3K611|RS4_PSEPF RecName: Full=30S ribosomal protein S4
 gi|77385280|gb|ABA76793.1| 30S ribosomal protein S4 [Pseudomonas fluorescens Pf0-1]
          Length = 206

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQRR  +  Y G QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +K A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VN+ SY+ + GDV+ V++K+K    +++A +L A+R   E++ V+ +  
Sbjct: 119 SHKSISVNGQTVNVPSYQVRAGDVVAVREKAKNQLRIVQALELCAQRGRVEWVEVDAEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206


>gi|237747389|ref|ZP_04577869.1| small subunit ribosomal protein S4 [Oxalobacter formigenes HOxBLS]
 gi|229378740|gb|EEO28831.1| small subunit ribosomal protein S4 [Oxalobacter formigenes HOxBLS]
          Length = 207

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 129/211 (61%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG +  ++ S +G QLR KQ
Sbjct: 1   MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDVKPGQHGMKSGARTSDYGNQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG I EK+FR  F EA+R +G+T  NL+  LESRLD +VYR  F  T   +RQ V
Sbjct: 61  KVKRMYG-ILEKQFRRYFAEAERRKGNTGDNLMQLLESRLDNVVYRMGFGSTRAESRQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +H+ ++VNG+ VNI SY  K  DVI +++K+K+   ++E+  LAE+  + +++SV+   M
Sbjct: 120 SHQALMVNGKVVNIPSYLVKPEDVITIREKAKKQNRIVESLSLAEQIGLADWVSVDSKKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P   +   +   +  +L++E YSR
Sbjct: 180 EGVFKRVPDRSE---FANDVNESLIIELYSR 207


>gi|251797775|ref|YP_003012506.1| ribosomal protein S4 [Paenibacillus sp. JDR-2]
 gi|247545401|gb|ACT02420.1| ribosomal protein S4 [Paenibacillus sp. JDR-2]
          Length = 199

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K K+ RR+G +L G  K     R + PG HG  ++ K S +G+QL+ KQK++ 
Sbjct: 1   MSRYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGPNQRKKLSGYGVQLQEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+FR++F +A + +G +  N +  LESRLD +V+R  F  +   ARQ V+H H
Sbjct: 59  MYG-LNEKQFRNLFDKAAKLKGISGENFMVLLESRLDNLVFRLGFANSRAGARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SY    GDVI ++++S+ L S+ EA +     +P YI  N   +   +V
Sbjct: 118 VTVNGKKVDIASYTVSTGDVIGLRERSRGLKSIKEAIE-GRHHLPNYIEFNDAAVEGKYV 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 177 RLPERAE---LSQEIDEKQIVEFYSR 199


>gi|189347677|ref|YP_001944206.1| 30S ribosomal protein S4 [Chlorobium limicola DSM 245]
 gi|226697820|sp|B3EGW4|RS4_CHLL2 RecName: Full=30S ribosomal protein S4
 gi|189341824|gb|ACD91227.1| ribosomal protein S4 [Chlorobium limicola DSM 245]
          Length = 203

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 124/207 (59%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R + PG HGQ RK K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGVALSPKAEKYLERRPFAPGQHGQSRKGKVSEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR+ +K+A   RG T  NL+  LE RLD +V+R+ F  +   ARQ V+H H
Sbjct: 61  LYG-ILEKQFRNYYKKAVAQRGVTGDNLVKLLERRLDNVVFRSGFSASRAGARQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           ++VNG+ VNI S++   GD+IE +Q+S+ + +V ++   A E   P +I V+  N  A F
Sbjct: 120 LVVNGKKVNIPSFQVSPGDLIEFRQRSRNMGAVTDSLSKAPESRFPSWIQVDKANQKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P   +D+  P      LVVE YS+
Sbjct: 180 LSVPER-EDIQEP--FNEQLVVELYSK 203


>gi|126662239|ref|ZP_01733238.1| 30S ribosomal protein S4 [Flavobacteria bacterium BAL38]
 gi|126625618|gb|EAZ96307.1| 30S ribosomal protein S4 [Flavobacteria bacterium BAL38]
          Length = 201

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  K     R+Y PG HG  +++ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGEDK-AFEKRNYPPGQHGLAKKRGKKSEYAVQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR++FK+A  + G T   L+   E+RLD +VYR    P+  AARQ V+HR
Sbjct: 60  YTYG-ILEKQFRNLFKKASAASGVTGEILLQLCEARLDNVVYRMGVAPSRRAARQIVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VN+ SY  K GD + V++KSK L ++  +   + + V E+I+ N+D    TF
Sbjct: 119 HITVNGELVNVPSYHLKAGDKVAVREKSKSLEAIERSLASSSQ-VYEWITWNNDTKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P  L+    P  ++  L+VE Y++
Sbjct: 178 VSVPQRLQ---IPENIKEQLIVELYNK 201


>gi|320547679|ref|ZP_08041964.1| 30S ribosomal protein S4 [Streptococcus equinus ATCC 9812]
 gi|320447754|gb|EFW88512.1| 30S ribosomal protein S4 [Streptococcus equinus ATCC 9812]
          Length = 203

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VE+Y++
Sbjct: 178 TRLPERDE---INPEINEALIVEYYNK 201


>gi|256830514|ref|YP_003159242.1| ribosomal protein S4 [Desulfomicrobium baculatum DSM 4028]
 gi|256579690|gb|ACU90826.1| ribosomal protein S4 [Desulfomicrobium baculatum DSM 4028]
          Length = 208

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +I RR G  L+ +       K     R+Y PG HG+ RK KPS + LQLR 
Sbjct: 1   MARYTGPKCRICRREGGKLFLKGDRCYTDKCAFERRAYAPGDHGKARK-KPSDYALQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++K YG I E +FR  F+EA+R +G T  NL+  LE+R+D + Y+  F  +   ARQ
Sbjct: 60  KQKVRKMYG-ILEGQFRRYFEEAERRKGITGTNLLMLLETRIDNVAYKLGFANSRSQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NGR VN+ S + K GDV+EV+ ++K+   + EA + +A R VP ++ ++  
Sbjct: 119 MVRHGLFSLNGRRVNVPSIQMKSGDVLEVRDRTKKNLVITEALEVVARRGVPAWLEIDAP 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +   +P+  +D+ +P  M   L+VE YS+
Sbjct: 179 AFKGSVKALPTR-EDITFP--MTEQLIVELYSK 208


>gi|319938287|ref|ZP_08012684.1| 30S ribosomal protein S4 [Coprobacillus sp. 29_1]
 gi|319806580|gb|EFW03238.1| 30S ribosomal protein S4 [Coprobacillus sp. 29_1]
          Length = 201

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + K  RR+G +     K  ++ R Y PG HGQ+RK KP+ +GLQL  KQK++ 
Sbjct: 1   MARYTGPQWKKSRRLGFSTLETGKE-LSKRPYAPGQHGQKRK-KPTEYGLQLAEKQKVRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+FR+ F  A +  G T +N    LE+RLD +VYR  F  T   ARQ VNH H
Sbjct: 59  MYG-VNEKQFRNTFFRASKMDGITGYNFFCLLETRLDNVVYRLGFATTRRQARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L+NG   +I S + K GDV+ VK+KSK L  +  +   ++  VP ++ V+ D M   F+
Sbjct: 118 ILLNGVKTDIASCQVKVGDVVAVKEKSKSLEIIKTSLA-SQNHVPGFVEVDADKMEGKFI 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +  +L+VE+Y+R
Sbjct: 177 RLPERSE---LNQEINESLIVEYYNR 199


>gi|284049864|ref|ZP_06380074.1| 30S ribosomal protein S4 [Arthrospira platensis str. Paraca]
 gi|291571495|dbj|BAI93767.1| 30S ribosomal protein S4 [Arthrospira platensis NIES-39]
          Length = 202

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+G+      K+    R+Y PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVARRLGDLPGLTRKTA--RRAYPPGQHGQARRKRSEY-AVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     ++A R+ G T   L+ +LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-LSERQLLRYVRKARRASGSTGQVLLQYLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+C+ G++I V+ + K    V    Q     +VP ++ ++ +N+ AT 
Sbjct: 117 ITVNGKVVDIASYQCRPGEIIGVRNRDKSREMVKANLQYPGLANVPSHLELDKNNLTATV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIER---EWVALSINELLVVEYYSR 200


>gi|296875556|ref|ZP_06899628.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 15912]
 gi|312866896|ref|ZP_07727109.1| ribosomal protein S4 [Streptococcus parasanguinis F0405]
 gi|296433480|gb|EFH19255.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 15912]
 gi|311097679|gb|EFQ55910.1| ribosomal protein S4 [Streptococcus parasanguinis F0405]
          Length = 203

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKVKEGTVGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + D +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATVGRPAFVSFDADKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|167752411|ref|ZP_02424538.1| hypothetical protein ALIPUT_00655 [Alistipes putredinis DSM 17216]
 gi|167660652|gb|EDS04782.1| hypothetical protein ALIPUT_00655 [Alistipes putredinis DSM 17216]
          Length = 202

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M +    K KI R+ GE ++G  +  +  R++ PG HG  R++ K S +G QL  KQK K
Sbjct: 1   MGRYIGPKSKIARKFGEAIFGADR-VLEKRNFPPGQHGLARKRKKVSEYGQQLSEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+F   +++A R  G T  NL+  LE RLD +VYR    PT  AARQ V+H 
Sbjct: 60  ATYG-LLEKQFSRTYEQAARMGGITGENLLKLLECRLDNVVYRLGIAPTRAAARQLVSHC 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GD++ V++KSK L  ++ +     +    ++  +   M   F
Sbjct: 119 HICVNGNVVNIPSYSLKVGDIVSVREKSKSLEVIVGSLAGGSKSRYAWLEWDGAAMAGKF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ P   +    P  ++  L+VE YS+
Sbjct: 179 LQRPEREE---IPENIKEQLIVELYSK 202


>gi|332107892|gb|EGJ09116.1| 30S ribosomal protein S4 [Rubrivivax benzoatilyticus JA2]
          Length = 207

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   S+ S +G+QLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIGDKAKFDSK---PGQHGRTSGSRTSDYGVQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EA+R +G+T  NL++ LESRLD +VYR  F  T   +R
Sbjct: 58  EKQKVKRMYGVL-ERQFRRYFAEAERRKGNTGSNLLALLESRLDNVVYRMGFGSTRAESR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG+ VNI SY  K GDV+ V++K+K    V +A +LA+     E++ V+ 
Sbjct: 117 QLVSHKAITVNGQVVNIPSYMVKAGDVVAVREKAKNQLRVQDALKLAQTIGQCEWVQVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M   F ++P   +   +   ++  L+VE YSR
Sbjct: 177 TKMEGVFKKVPDRDQ---FGAEIKEALIVELYSR 207


>gi|311109577|ref|YP_003982430.1| 30S ribosomal protein S4 [Achromobacter xylosoxidans A8]
 gi|310764266|gb|ADP19715.1| ribosomal protein S4 [Achromobacter xylosoxidans A8]
          Length = 207

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR + +NG + +I S   K GDV+ +++K+K+   + E+  LA    +P+++ V+   +
Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVVSIREKAKKQGRIKESLDLATSIGIPQWVEVDTTKL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P           +  ++VVE YSR
Sbjct: 180 TGTFKSAPDRAD---VARDINESMVVELYSR 207


>gi|146298136|ref|YP_001192727.1| 30S ribosomal protein S4 [Flavobacterium johnsoniae UW101]
 gi|189045380|sp|A5FN16|RS4_FLAJO RecName: Full=30S ribosomal protein S4
 gi|146152554|gb|ABQ03408.1| 30S ribosomal protein S4 [Flavobacterium johnsoniae UW101]
          Length = 201

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ GE ++G  KS    R+Y PG HG  +++ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGEAIFGDDKS-FEKRNYPPGQHGMAKKRGKKSEYAVQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR++F++A  ++G T   L+   E+RLD +V+R    P+   ARQ V+HR
Sbjct: 60  YSYG-ILEKQFRNLFEKASATKGVTGEVLLQLCEARLDNVVFRMGIAPSRRGARQIVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GD + V++KSK L ++  +   +   V E+I+ N+D    TF
Sbjct: 119 HITVNGEVVNIPSYHLKPGDKVAVREKSKSLEAIERSLSNSSH-VYEWITWNNDLKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P+ L+    P  ++  L+VE Y++
Sbjct: 178 VSVPARLQ---IPENIKEQLIVELYNK 201


>gi|317401573|gb|EFV82202.1| 30S ribosomal protein S4 [Achromobacter xylosoxidans C54]
          Length = 207

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR + +NG + +I S   K GDVI +++K+K+   + E+  LA    +P+++ V+   +
Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVISIREKAKKQGRIKESLDLATSIGIPQWVEVDTTKL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P           +  ++VVE YSR
Sbjct: 180 TGTFKSAPDRAD---VARDINESMVVELYSR 207


>gi|307543849|ref|YP_003896328.1| 30S ribosomal protein S4 [Halomonas elongata DSM 2581]
 gi|307215873|emb|CBV41143.1| 30S ribosomal protein S4 [Halomonas elongata DSM 2581]
          Length = 206

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +   +P   +      PG+HGQRR+    Y GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVTPFEKKCKSEQIPGVHGQRRQRISEY-GLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EKQFRNYYKEAARLKGATGELLLQLLESRLDNVVYRMGFGSTRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNGR+VN+ SY+ K GDV+ V++K+K  A +  A  + A R    ++  +   M
Sbjct: 119 SHKAIAVNGRTVNVASYQVKPGDVVSVREKAKNQARIQNALGIAANRGDVAWVETDAKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF  +P           +  NL+VE YS+
Sbjct: 179 EGTFKALPERGD---LSADINENLIVELYSK 206


>gi|15892391|ref|NP_360105.1| 30S ribosomal protein S4 [Rickettsia conorii str. Malish 7]
 gi|157828341|ref|YP_001494583.1| 30S ribosomal protein S4 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933050|ref|YP_001649839.1| 30S ribosomal protein S4 [Rickettsia rickettsii str. Iowa]
 gi|229586609|ref|YP_002845110.1| 30S ribosomal protein S4 [Rickettsia africae ESF-5]
 gi|238651051|ref|YP_002916908.1| 30S ribosomal protein S4 [Rickettsia peacockii str. Rustic]
 gi|26399443|sp|Q92IF2|RS4_RICCN RecName: Full=30S ribosomal protein S4
 gi|172045661|sp|A8F1B5|RS4_RICM5 RecName: Full=30S ribosomal protein S4
 gi|172047812|sp|A8GRQ0|RS4_RICRS RecName: Full=30S ribosomal protein S4
 gi|189045394|sp|B0BX57|RS4_RICRO RecName: Full=30S ribosomal protein S4
 gi|259495290|sp|C3PN57|RS4_RICAE RecName: Full=30S ribosomal protein S4
 gi|259495291|sp|C4K2Q9|RS4_RICPU RecName: Full=30S ribosomal protein S4
 gi|15619541|gb|AAL03006.1| 30S ribosomal protein S4 [Rickettsia conorii str. Malish 7]
 gi|157800822|gb|ABV76075.1| 30S ribosomal protein S4 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908137|gb|ABY72433.1| SSU ribosomal protein S4P [Rickettsia rickettsii str. Iowa]
 gi|228021659|gb|ACP53367.1| 30S ribosomal protein S4 [Rickettsia africae ESF-5]
 gi|238625149|gb|ACR47855.1| 30S ribosomal protein S4 [Rickettsia peacockii str. Rustic]
          Length = 205

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/206 (47%), Positives = 136/206 (66%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+FR+IF  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H
Sbjct: 61  HYGRVTEKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+  +I S R K GDVIEVK+  KQ+  + E+     +  P Y+S +  ++   ++
Sbjct: 121 IKLNGKKADIASIRLKAGDVIEVKESVKQIPLIQESVSKQGQTTPGYLSFDVPSLTGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYP   + +LV+E YSR
Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205


>gi|78186094|ref|YP_374137.1| 30S ribosomal protein S4 [Chlorobium luteolum DSM 273]
 gi|90101702|sp|Q3B6D7|RS4_PELLD RecName: Full=30S ribosomal protein S4
 gi|78165996|gb|ABB23094.1| SSU ribosomal protein S4P [Chlorobium luteolum DSM 273]
          Length = 203

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R + PG HGQ R+ K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGVALSPKAEKYLERRPFAPGQHGQGRRGKISEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR+ +K+A   RG T  NL+  +E RLD +V+RA F P+   ARQ V+H H
Sbjct: 61  LYG-ILEKQFRNYYKKAVSQRGVTGDNLVKLIERRLDNVVFRAGFAPSRAGARQLVSHSH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+    GD+IE +QKS+ + +V +A   A +  +P +I V+  N  A F
Sbjct: 120 LLVNGRKVNIPSFLVSPGDLIEFRQKSRNMDAVTDALNRAPDARIPAWIQVDKANQKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P     V         LVVE YS+
Sbjct: 180 LSVPER---VDIQEPYNEQLVVELYSK 203


>gi|83816564|ref|YP_445191.1| 30S ribosomal protein S4 [Salinibacter ruber DSM 13855]
 gi|294507075|ref|YP_003571133.1| 30S ribosomal protein S4 [Salinibacter ruber M8]
 gi|123529117|sp|Q2S3P0|RS4_SALRD RecName: Full=30S ribosomal protein S4
 gi|83757958|gb|ABC46071.1| ribosomal protein S4 [Salinibacter ruber DSM 13855]
 gi|294343403|emb|CBH24181.1| 30S ribosomal protein S4 [Salinibacter ruber M8]
          Length = 200

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR  E ++G  K  +  + Y PG HGQ R+ + S + +QL+ KQK K 
Sbjct: 1   MARYRGPKQKIARRFKEPIFGPSK-ALERKPYPPGQHGQSRRRRESEYAVQLKEKQKTKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++F+++F +A R +G T   L+  LE+RLD  V+R     T   ARQFV HRH
Sbjct: 60  TYG-LLERQFKNLFDKASRMQGVTGEKLLILLEARLDNTVFRMGIARTRRQARQFVAHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VN   V+I SY     DV+ VK  S+ L  +    +  +R    ++ ++   M   F+
Sbjct: 119 IMVNDEVVDIPSYEMSPDDVVSVKPSSQDLEVIQTNVEHRQRTF-SWLEMDRQEMKGKFI 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P+  +    P  +   L+VE YS+
Sbjct: 178 DYPNREE---IPENIDEQLIVELYSK 200


>gi|172058242|ref|YP_001814702.1| ribosomal protein S4 [Exiguobacterium sibiricum 255-15]
 gi|226699065|sp|B1YKD2|RS4_EXIS2 RecName: Full=30S ribosomal protein S4
 gi|171990763|gb|ACB61685.1| ribosomal protein S4 [Exiguobacterium sibiricum 255-15]
          Length = 199

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L    K  +  R Y PG HG  R+    Y GLQL+AKQ ++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLTETGKE-IAKRPYAPGQHGNSRRKMSEY-GLQLQAKQTLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F  IF +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 59  MYG-VNERQFNRIFNDAGKMPGIHGENFMFLLEARLDNVVYRMGMARTRRAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I S+R K G  I V++KSK    + EA ++A     ++++ + + +  TFV
Sbjct: 118 IQVDGARVDIPSFRVKPGQTISVREKSKNFVVIKEALEVAPATK-DFVTFDAEKLEGTFV 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +Q  LVVE+YSR
Sbjct: 177 RLPERSE---LNDQIQEQLVVEYYSR 199


>gi|196228479|ref|ZP_03127346.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428]
 gi|196227882|gb|EDY22385.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428]
          Length = 203

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 7/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           M++    K +I RR G  L+G  K  +  ++YGPG+HG +  + K S + + L  KQK++
Sbjct: 1   MARYTGPKTRISRRFGVALFGPSK-ALERKNYGPGMHGPKGSRRKQSEYAIALGEKQKLR 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR  F  A   RG T   L+  LE+RLD ++YR  F  +  AARQ V+H 
Sbjct: 60  YQYGVL-ERQFRRYFTIASTRRGVTGEILLQLLETRLDNVIYRLGFANSRSAARQLVSHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178
           HV VNGR V++ S+  K GD I +K K +      +  +L +   VPE+++V+ +     
Sbjct: 119 HVQVNGRKVDVSSFNVKAGDAITIKDKPQSRRLAAKNLELTQITPVPEWLTVDKEQFSGK 178

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             RIPS  +  P    +   L+VE YSR
Sbjct: 179 VSRIPSRDEIAPI---VNEQLIVELYSR 203


>gi|22538271|ref|NP_689122.1| 30S ribosomal protein S4 [Streptococcus agalactiae 2603V/R]
 gi|25012131|ref|NP_736526.1| 30S ribosomal protein S4 [Streptococcus agalactiae NEM316]
 gi|76787020|ref|YP_330685.1| 30S ribosomal protein S4 [Streptococcus agalactiae A909]
 gi|76799096|ref|ZP_00781286.1| ribosomal protein S4 [Streptococcus agalactiae 18RS21]
 gi|77406884|ref|ZP_00783910.1| ribosomal protein S4 [Streptococcus agalactiae H36B]
 gi|77408905|ref|ZP_00785630.1| ribosomal protein S4 [Streptococcus agalactiae COH1]
 gi|77410869|ref|ZP_00787226.1| ribosomal protein S4 [Streptococcus agalactiae CJB111]
 gi|77413207|ref|ZP_00789405.1| ribosomal protein S4 [Streptococcus agalactiae 515]
 gi|41017840|sp|Q8DWS6|RS4_STRA5 RecName: Full=30S ribosomal protein S4
 gi|41017841|sp|Q8E2M6|RS4_STRA3 RecName: Full=30S ribosomal protein S4
 gi|90101728|sp|Q3JYG8|RS4_STRA1 RecName: Full=30S ribosomal protein S4
 gi|22535185|gb|AAN00995.1|AE014288_13 ribosomal protein S4 [Streptococcus agalactiae 2603V/R]
 gi|24413675|emb|CAD47755.1| 30S ribosomal protein S4 [Streptococcus agalactiae NEM316]
 gi|76562077|gb|ABA44661.1| ribosomal protein S4 [Streptococcus agalactiae A909]
 gi|76585564|gb|EAO62132.1| ribosomal protein S4 [Streptococcus agalactiae 18RS21]
 gi|77160747|gb|EAO71860.1| ribosomal protein S4 [Streptococcus agalactiae 515]
 gi|77163087|gb|EAO74041.1| ribosomal protein S4 [Streptococcus agalactiae CJB111]
 gi|77172496|gb|EAO75640.1| ribosomal protein S4 [Streptococcus agalactiae COH1]
 gi|77174516|gb|EAO77359.1| ribosomal protein S4 [Streptococcus agalactiae H36B]
 gi|319746120|gb|EFV98393.1| 30S ribosomal protein S4 [Streptococcus agalactiae ATCC 13813]
          Length = 203

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A +++  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKAKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|254426804|ref|ZP_05040511.1| ribosomal protein S4 [Alcanivorax sp. DG881]
 gi|196192973|gb|EDX87932.1| ribosomal protein S4 [Alcanivorax sp. DG881]
          Length = 210

 Score =  209 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 12/214 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQ------RRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +    P+ ++       GQ      RR ++ S +G+QLR
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGIRPLESKCKAEQAPGQAAGASGRRPARLSDYGVQLR 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+++ YG + EK+FRS +K+A  S+G T   L+  LE RLD +VYR  F  T   AR
Sbjct: 61  EKQKVRRTYGVL-EKQFRSYYKKAAASKGATGEVLLQLLEGRLDNVVYRMGFGSTRSEAR 119

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNH 172
           Q V+HR +LVNG+SVN+ SY+ K GD I V++KSK    V  A +LA +R    +I V+ 
Sbjct: 120 QLVSHRAILVNGQSVNVASYQVKPGDQINVREKSKNQLRVKNAMELAQQRGFMPWIEVDD 179

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  T+   P     +  P  +  NL+VE YS+
Sbjct: 180 KKLEGTYKAKPER---IDLPAEINENLIVELYSK 210


>gi|149912288|ref|ZP_01900859.1| 30S ribosomal protein S4 [Moritella sp. PE36]
 gi|149804633|gb|EDM64692.1| 30S ribosomal protein S4 [Moritella sp. PE36]
          Length = 206

 Score =  209 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGVHGA-RKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+++KEA R +G+T  NL++ LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRMYGVL-EKQFRNLYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNG+ VNI SY+ K  D + +++K+K+ A +  A +++E R+   ++ V+   +
Sbjct: 119 SHKAIVVNGKVVNIPSYKVKVNDTVSIREKAKKQARIASALEISEQREKASWVEVDSKTL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + R+P           +   L+VE YS+
Sbjct: 179 EGVYKRVPERSD---LSADINEQLIVELYSK 206


>gi|257483209|ref|ZP_05637250.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331012437|gb|EGH92493.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 206

 Score =  209 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQRR  +  Y G QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +KEA   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKEAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ V VNG++VN+ SY+ + GDV+ +++K+K    +++A  L A+R   E++ V+ +N 
Sbjct: 119 SHKSVSVNGKTVNVPSYQVRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTENK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206


>gi|229592879|ref|YP_002874998.1| 30S ribosomal protein S4 [Pseudomonas fluorescens SBW25]
 gi|312963346|ref|ZP_07777829.1| 30S ribosomal protein S4 [Pseudomonas fluorescens WH6]
 gi|330812052|ref|YP_004356514.1| 30S ribosomal protein S4 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|259495288|sp|C3K2V2|RS4_PSEFS RecName: Full=30S ribosomal protein S4
 gi|229364745|emb|CAY52725.1| 30S ribosomal protein S4 [Pseudomonas fluorescens SBW25]
 gi|311282426|gb|EFQ61024.1| 30S ribosomal protein S4 [Pseudomonas fluorescens WH6]
 gi|327380160|gb|AEA71510.1| 30S ribosomal protein S4 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 206

 Score =  209 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQRR  +  Y G QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +KEA   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKEAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VN+ SY+ + GDV+ V++K+K    +++A  L A+R   E++ V+ +  
Sbjct: 119 SHKSISVNGQTVNVPSYQVRAGDVVAVREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206


>gi|330505183|ref|YP_004382052.1| 30S ribosomal protein S4 [Pseudomonas mendocina NK-01]
 gi|328919469|gb|AEB60300.1| 30S ribosomal protein S4 [Pseudomonas mendocina NK-01]
          Length = 206

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +K+A   +G T  NL+  LE RLD +VYR  +  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKQAASQKGATGENLLQLLECRLDNVVYRMGYGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VN+ SY+ K GDV+ V++KSK    + +A +L A+R   E++ V+ +  
Sbjct: 119 SHKAISVNGQTVNVPSYQVKAGDVVAVREKSKNQLRIAQALELCAQRGRVEWVEVDAEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206


>gi|162022123|ref|YP_246565.2| 30S ribosomal protein S4 [Rickettsia felis URRWXCal2]
 gi|90101714|sp|Q4UM23|RS4_RICFE RecName: Full=30S ribosomal protein S4
          Length = 205

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 98/206 (47%), Positives = 137/206 (66%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+FR+IF  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H
Sbjct: 61  HYGRVTEKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+  +I S R KEGDVIEVK+  KQ+  + E+     +  P Y+S +  ++   ++
Sbjct: 121 IKLNGKKADIASIRLKEGDVIEVKESVKQIPLIQESVSKQAQTTPGYLSFDVPSLTGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYP   + +LV+E YSR
Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205


>gi|323350794|ref|ZP_08086453.1| 30S ribosomal protein S4 [Streptococcus sanguinis VMC66]
 gi|322122968|gb|EFX94671.1| 30S ribosomal protein S4 [Streptococcus sanguinis VMC66]
 gi|325689321|gb|EGD31327.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK115]
 gi|325695727|gb|EGD37626.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK150]
          Length = 245

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 43  MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 101

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +      N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 102 TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 160

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 161 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 219

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VEFY++
Sbjct: 220 TRLPERDE---INPEINEALIVEFYNK 243


>gi|182418834|ref|ZP_02950099.1| ribosomal protein S4 [Clostridium butyricum 5521]
 gi|237666637|ref|ZP_04526622.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377331|gb|EDT74892.1| ribosomal protein S4 [Clostridium butyricum 5521]
 gi|237657836|gb|EEP55391.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 206

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HG  +K    Y G+QLR 
Sbjct: 1   MARYTGATCRLCRREGMKLFLKGDRCFTDKCAFVRRSYAPGQHGANKKKISGY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR+ +++A+  +G +  NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKAKRIYGVL-ESQFRAYYEKAEHMKGISGENLLKLLEMRLDNVVYRLGYGASRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY     DVI V +KS+        ++   + +P ++  N DN
Sbjct: 119 LVTHGHFLVNGKKVDICSYSVSANDVITVCEKSRASEKFKTFAENP-KTLPAWLEANVDN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V +PS  +     V +   L+VE YS+
Sbjct: 178 FEGKVVAVPSREE---IDVPVNETLIVELYSK 206


>gi|331004909|ref|ZP_08328325.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC1989]
 gi|330421296|gb|EGG95546.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC1989]
          Length = 205

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 123/210 (58%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +     ++++      PG+HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPTCKLARREGTDLFLKSGVRSLDSKCKLETAPGVHG-VRRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRTYGVL-EKQFRAYYKEAARRKGATGENLLKLLETRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
           +H+ +LVNG +VNI SY+ K  DVI +++K+K    +  A  LA +   E++ V+   + 
Sbjct: 119 SHKSILVNGSTVNIPSYQVKAEDVISIREKAKNQLRIKSALDLAAQRDVEWVEVSAAKLE 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T  R+P        P  +  NL+VE YS+
Sbjct: 179 GTLKRVPDR---EDLPAEINENLIVELYSK 205


>gi|21674972|ref|NP_663037.1| 30S ribosomal protein S4 [Chlorobium tepidum TLS]
 gi|26399358|sp|P59129|RS4_CHLTE RecName: Full=30S ribosomal protein S4
 gi|21648204|gb|AAM73379.1| ribosomal protein S4 [Chlorobium tepidum TLS]
          Length = 203

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 119/207 (57%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R Y PG HGQ R+ K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGIALSPKAEKYLERRPYAPGQHGQSRRGKVSEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR+ +K+A   RG T  NL+  LE RLD +VYR  F P+   ARQ V H H
Sbjct: 61  LYG-ILEKQFRNYYKKAVAQRGVTGDNLVKMLERRLDNVVYRCGFSPSRAGARQLVTHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI S+    GD IE +QKS+ L +V ++   + +  +PE+I V+  N  A F
Sbjct: 120 MLVNGKKVNIPSFLVSPGDQIEFRQKSRNLDAVADSLNKVPDSRIPEWIQVDKANRKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + IP               LVVE YS+
Sbjct: 180 LAIPER---EAVQEPFNEQLVVELYSK 203


>gi|331701254|ref|YP_004398213.1| 30S ribosomal protein S4 [Lactobacillus buchneri NRRL B-30929]
 gi|329128597|gb|AEB73150.1| ribosomal protein S4 [Lactobacillus buchneri NRRL B-30929]
          Length = 203

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G +L G  K  ++ R Y PG HGQ R+SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRSKLSEYGLQLHEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLEERLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI V++KSK L  + +A + A    P+Y+S + D +  + 
Sbjct: 119 HITVDGKRVDIPSYEVQPGQVISVREKSKDLQVIKDAVE-AVVGRPQYVSFDADKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +  +L+VE+Y++
Sbjct: 178 VRLPQREE---LDADIDESLIVEYYNK 201


>gi|319944771|ref|ZP_08019035.1| 30S ribosomal protein S4 [Lautropia mirabilis ATCC 51599]
 gi|319742020|gb|EFV94443.1| 30S ribosomal protein S4 [Lautropia mirabilis ATCC 51599]
          Length = 207

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 123/211 (58%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  +++++     PG HG+    + S +GLQLR KQ
Sbjct: 1   MARYTGPKAKLSRREGTDLFLKSARRSLDSKAKADTKPGQHGRTSGQRTSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + E++FR  F EA R RG+T   L+  LESRLD +VYR     T   ARQ V
Sbjct: 61  KVKRMYGVL-ERQFRRYFAEASRKRGNTGELLLQLLESRLDNVVYRMGLASTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR +LVNG  +N+ S   K  DVI VK+ +K+ A +++A  LAE+ + P ++SV+ + M
Sbjct: 120 SHRAILVNGAILNVPSAAIKPNDVISVKESAKKQARIVDALNLAEQHNFPSWVSVDKNKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F   P   +       +  +L+VE YSR
Sbjct: 180 EGVFKAYPDRSE---IAADVNESLIVELYSR 207


>gi|306834567|ref|ZP_07467680.1| 30S ribosomal protein S4 [Streptococcus bovis ATCC 700338]
 gi|304423369|gb|EFM26522.1| 30S ribosomal protein S4 [Streptococcus bovis ATCC 700338]
          Length = 203

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKIKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDTEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVE+Y++
Sbjct: 178 TRLPERDE---INPEINEALVVEYYNK 201


>gi|194335471|ref|YP_002017265.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226699099|sp|B4SBX3|RS4_PELPB RecName: Full=30S ribosomal protein S4
 gi|194307948|gb|ACF42648.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 203

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R + PG HGQ RK K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGIALAPKAEKYLERRPFPPGQHGQGRKGKVSEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR+ +K+A   RG T  NL+  LE R D +V+RA F P+   ARQ V H H
Sbjct: 61  LYG-ILEKQFRNYYKKAVSQRGVTGDNLVKLLERRFDNVVFRAGFAPSRSGARQLVTHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +L+NG+ V+I SY     +VIE +Q+SK + +V ++   A E  +P +I V+  N  A F
Sbjct: 120 LLINGKKVDIPSYIVSPSEVIEFRQRSKNMGAVTDSLNKAPESRIPSWIQVDKANQKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P  ++           LVVE YS+
Sbjct: 180 LSVPERVE---VQEPFNEQLVVELYSK 203


>gi|300770226|ref|ZP_07080105.1| 30S ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762702|gb|EFK59519.1| 30S ribosomal protein S4 [Sphingobacterium spiritivorum ATCC 33861]
          Length = 202

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+  E ++G  K  +  ++Y PG HG  +R+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKSKIARKFREPIFGPDK-ALEKKNYPPGQHGPSKRRGKQSEYAIQLLEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++F ++F +A   +G T  N +  LE+RLD  VYR    PT  AARQ V+H+
Sbjct: 60  YTYGVL-ERQFSNLFVKAAAKQGITGENFLKLLEARLDNTVYRLGIAPTRAAARQLVSHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  + GDVI V+++S+ L +V  + +  + +   ++  N +    TF
Sbjct: 119 HITVNGGVVNIPSYSLRPGDVIAVRERSQALEAVTTSVEGRKINKFAWLEWNANEFKGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P        P  ++ NL+VE YS+
Sbjct: 179 LSYPERTD---IPENIKENLIVELYSK 202


>gi|89893244|ref|YP_516731.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense Y51]
 gi|122483915|sp|Q250K5|RS4_DESHY RecName: Full=30S ribosomal protein S4
 gi|89332692|dbj|BAE82287.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense Y51]
          Length = 208

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 123/212 (58%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  ++ R+Y PG HGQ R  KP+ +G+QLR 
Sbjct: 1   MARYTGPVCRLCRREGMKLFLKGDRCYTGKCAIDRRAYAPGQHGQSRGKKPTEYGIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+FRS + +A+R +G    NL+  LE RLD +V++  F  +   ARQ
Sbjct: 61  KQKVRRIYG-VQEKQFRSYYDKANRQKGIVGENLLRLLERRLDNVVFQLGFATSRPEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  +NGR V+I S+  + GDV+ VK+ SK    + E     +R  P++++++ + 
Sbjct: 120 LVRHGHFTINGRRVDIPSFLVRVGDVVGVKEASKSSPRLKEILSSLDRTPPKWMNLDANA 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              T + +P   +D+  P  +Q +L+VE YSR
Sbjct: 180 ATGTIIALPDR-EDIQLP--IQEHLIVEKYSR 208


>gi|206890097|ref|YP_002249221.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226695094|sp|B5YG23|RS4_THEYD RecName: Full=30S ribosomal protein S4
 gi|206742035|gb|ACI21092.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 208

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR    ++ +       K     R Y PG HG  R  K S +GLQLR 
Sbjct: 1   MARYTGSLCRLCRRESMKMFLKGTRCYTEKCAFERRKYPPGQHGHNR-GKLSDYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E++F++ F++A + +G T  NL+  LE RLD ++YR  F      ARQ
Sbjct: 60  KQKVKRIYG-VMERQFKNYFEKATKMKGVTGENLLKLLERRLDNVIYRMGFAMNRRQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H +  VNG+ V+I SY  + GD+IE+ Q  K+L  + E+  LAE R  P ++ VN +
Sbjct: 119 LVRHGYFTVNGKKVDIPSYLVRPGDIIEIVQSGKELEIIKESLALAEQRGFPVWLEVNAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   FVR+P   +     + +Q  L+VEFYS+
Sbjct: 179 EMKGKFVRLPEREE---MQLPVQEQLIVEFYSK 208


>gi|28867878|ref|NP_790497.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|66047752|ref|YP_237593.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. syringae B728a]
 gi|71734874|ref|YP_276682.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|213969238|ref|ZP_03397376.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato T1]
 gi|289623825|ref|ZP_06456779.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648918|ref|ZP_06480261.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|289675512|ref|ZP_06496402.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. syringae FF5]
 gi|298489072|ref|ZP_07007094.1| SSU ribosomal protein S4p (S9e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301381745|ref|ZP_07230163.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato Max13]
 gi|302061055|ref|ZP_07252596.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato K40]
 gi|302130804|ref|ZP_07256794.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|302189301|ref|ZP_07265974.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. syringae 642]
 gi|37999395|sp|Q889U7|RS4_PSESM RecName: Full=30S ribosomal protein S4
 gi|81307873|sp|Q4ZMR7|RS4_PSEU2 RecName: Full=30S ribosomal protein S4
 gi|90101706|sp|Q48D60|RS4_PSE14 RecName: Full=30S ribosomal protein S4
 gi|28851114|gb|AAO54192.1| ribosomal protein S4 [Pseudomonas syringae pv. tomato str. DC3000]
 gi|63258459|gb|AAY39555.1| Ribosomal protein S4, bacterial and organelle form [Pseudomonas
           syringae pv. syringae B728a]
 gi|71555427|gb|AAZ34638.1| ribosomal protein S4 [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|213925916|gb|EEB59473.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. tomato T1]
 gi|298156384|gb|EFH97482.1| SSU ribosomal protein S4p (S9e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322298|gb|EFW78392.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331956|gb|EFW87892.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330869407|gb|EGH04116.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330879399|gb|EGH13548.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330879418|gb|EGH13567.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|330891908|gb|EGH24569.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330899712|gb|EGH31131.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330940914|gb|EGH43865.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330953173|gb|EGH53433.1| 30S ribosomal protein S4 [Pseudomonas syringae Cit 7]
 gi|330962501|gb|EGH62761.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. maculicola str.
           ES4326]
 gi|330966887|gb|EGH67147.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|330969797|gb|EGH69863.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330988258|gb|EGH86361.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331018184|gb|EGH98240.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 206

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +KEA   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKEAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ V VNG++VN+ SY+ + GDV+ +++K+K    +++A  L A+R   E++ V+ +  
Sbjct: 119 SHKSVSVNGKTVNVPSYQVRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206


>gi|187935054|ref|YP_001884501.1| 30S ribosomal protein S4 [Clostridium botulinum B str. Eklund 17B]
 gi|188590506|ref|YP_001919700.1| 30S ribosomal protein S4 [Clostridium botulinum E3 str. Alaska E43]
 gi|251777686|ref|ZP_04820606.1| 30S ribosomal protein S4 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|226697826|sp|B2UYD8|RS4_CLOBA RecName: Full=30S ribosomal protein S4
 gi|226697827|sp|B2TIK3|RS4_CLOBB RecName: Full=30S ribosomal protein S4
 gi|187723207|gb|ACD24428.1| 30S ribosomal protein S4 [Clostridium botulinum B str. Eklund 17B]
 gi|188500787|gb|ACD53923.1| 30S ribosomal protein S4 [Clostridium botulinum E3 str. Alaska E43]
 gi|243082001|gb|EES47891.1| 30S ribosomal protein S4 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 206

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HG  +K K S +G+QLR 
Sbjct: 1   MARYTGATCRLCRREGMKLFLKGDRCFTDKCAFVRRSYAPGQHGASKK-KMSNYGIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR+ +++A+  +G T  NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKARRIYG-ILEGQFRTYYEKAEHMKGITGENLLKLLEMRLDNVVYRLGYGASRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY     DVI V +KS+         +   + +P+++  N DN
Sbjct: 119 LVTHGHFLVNGKKVDICSYHVSMNDVITVCEKSRSSEKFKTFVENP-KTLPKWLEANVDN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  PS  +D+  PV     L+VE YS+
Sbjct: 178 YEGKVVAEPSR-EDIDVPV--NETLIVELYSK 206


>gi|225850762|ref|YP_002730996.1| 30S ribosomal protein S4 [Persephonella marina EX-H1]
 gi|254764604|sp|C0QQQ0|RS4_PERMH RecName: Full=30S ribosomal protein S4
 gi|225645002|gb|ACO03188.1| ribosomal protein S4 [Persephonella marina EX-H1]
          Length = 205

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 7/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG--QRRKSKPSYFGLQLRAKQKM 58
           M +      K+ RR+G  + G  K     R++ PG HG  Q RK K S + ++L+ KQK+
Sbjct: 1   MGRYLGPLTKVSRRLGVFVGGSLK-AFQKRNFPPGQHGRVQGRKVKLSDYAIRLQEKQKL 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG I EK+F+  F EA RS G+T   L+  LE RLD +VYR  F  T   ARQ V H
Sbjct: 60  RYLYGGIREKQFKRYFDEAARSAGNTGQILLQLLERRLDNVVYRLGFAKTRRQARQLVRH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
            H LVNGR V+I SYR   GD+IE+++KS+      E  +  + R +P ++ ++ +N   
Sbjct: 120 GHFLVNGRKVDIPSYRVDPGDIIELREKSRNSPLFKENLESRDPRSIPNWLELDKENFRG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
             + IP   +++   + +   L++EFYS
Sbjct: 180 KVLEIP---QEIELEIPVNVQLIIEFYS 204


>gi|170078686|ref|YP_001735324.1| 30S ribosomal protein S4 [Synechococcus sp. PCC 7002]
 gi|226695087|sp|B1XI84|RS4_SYNP2 RecName: Full=30S ribosomal protein S4
 gi|169886355|gb|ACB00069.1| ribosomal protein S4 [Synechococcus sp. PCC 7002]
          Length = 202

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   ++ +I RR+GE      KS    R Y PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MARYRGARLRITRRLGELPGLTRKSA--RREYPPGQHGQGRRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     ++A R+ G T   ++  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VSEKQLIRYVRKARRTTGSTGQTILQLLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I SY+C+ GDVI V+ + +    +    +     ++P ++  +   +    
Sbjct: 117 ILVNGRVVDIPSYQCRPGDVITVRDRDRSRKLIEANMEFPGLANIPSHLEFDKPTLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   LVVE+YSR
Sbjct: 177 NGIIER---EWVALQINELLVVEYYSR 200


>gi|28198376|ref|NP_778690.1| 30S ribosomal protein S4 [Xylella fastidiosa Temecula1]
 gi|182681017|ref|YP_001829177.1| 30S ribosomal protein S4 [Xylella fastidiosa M23]
 gi|32129992|sp|Q87E60|RS4_XYLFT RecName: Full=30S ribosomal protein S4
 gi|226703311|sp|B2I8J2|RS4_XYLF2 RecName: Full=30S ribosomal protein S4
 gi|28056446|gb|AAO28339.1| 30S ribosomal protein S4 [Xylella fastidiosa Temecula1]
 gi|182631127|gb|ACB91903.1| ribosomal protein S4 [Xylella fastidiosa M23]
          Length = 208

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  R   PG HG  RKSK S +  QLR
Sbjct: 1   MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K A   +G+T  NL+  LE+RLD ++YR  F  T  AAR
Sbjct: 58  EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171
           Q V+HR VLVNG+ VN+ SY  K GDV+ + Q++++   V E+  + ++      +I V+
Sbjct: 117 QLVSHRSVLVNGKMVNLPSYHVKPGDVVALSQRAQKYLCVQESLTIKDQHGSAFSWIEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +     F  +P        P  +   L+VE YS+
Sbjct: 177 SEKFSGVFKALPDRAD---LPSDINEALIVELYSK 208


>gi|71276503|ref|ZP_00652778.1| Ribosomal protein S4, bacterial and organelle form [Xylella
           fastidiosa Dixon]
 gi|71900586|ref|ZP_00682713.1| Ribosomal protein S4, bacterial and organelle form [Xylella
           fastidiosa Ann-1]
 gi|170729723|ref|YP_001775156.1| 30S ribosomal protein S4 [Xylella fastidiosa M12]
 gi|226703312|sp|B0U5M2|RS4_XYLFM RecName: Full=30S ribosomal protein S4
 gi|71162680|gb|EAO12407.1| Ribosomal protein S4, bacterial and organelle form [Xylella
           fastidiosa Dixon]
 gi|71729643|gb|EAO31747.1| Ribosomal protein S4, bacterial and organelle form [Xylella
           fastidiosa Ann-1]
 gi|167964516|gb|ACA11526.1| 30S ribosomal protein S4 [Xylella fastidiosa M12]
          Length = 208

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/215 (34%), Positives = 117/215 (54%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  R   PG HG  RKSK S +  QLR
Sbjct: 1   MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K A   +G+T  NL+  LE+RLD ++YR  F  T  AAR
Sbjct: 58  EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171
           Q V+HR VLVNG+ VN+ SY  K GD++ + Q++++   V E+  + ++      ++ V+
Sbjct: 117 QLVSHRGVLVNGKIVNLPSYHVKPGDIVALSQRAQKYLCVQESLTIKDQHGSAFSWVEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +     F  +P        P  +   L+VE YS+
Sbjct: 177 SEKFSGVFKALPDRAD---LPSDINEALIVELYSK 208


>gi|86132569|ref|ZP_01051162.1| 30S ribosomal protein S4 [Dokdonia donghaensis MED134]
 gi|85816811|gb|EAQ37996.1| 30S ribosomal protein S4 [Dokdonia donghaensis MED134]
          Length = 201

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+  E ++G  KS    R+Y PG HG  RR+ K S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFSEAIFGEDKS-FEKRNYPPGQHGNNRRRGKKSEYAVQLAEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++FR+++  A+R+ G T   L+   E RLD +VYR    P+   ARQ V HR
Sbjct: 60  YTYG-ILERQFRNMYDRANRAPGITGEVLLQLCECRLDNVVYRMGMSPSRSGARQLVGHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY+ K GDVI V++KSK L  +  +   A   V E+I+ N+D    TF
Sbjct: 119 HITVNGNIVNIPSYQVKAGDVIAVREKSKSLEVISNSLSNASH-VFEWITWNNDKKEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P  L+    P  +    +VE YS+
Sbjct: 178 VAVPQRLQ---IPENINTQFIVELYSK 201


>gi|150015071|ref|YP_001307325.1| 30S ribosomal protein S4 [Clostridium beijerinckii NCIMB 8052]
 gi|189045374|sp|A6LPT9|RS4_CLOB8 RecName: Full=30S ribosomal protein S4
 gi|149901536|gb|ABR32369.1| ribosomal protein S4 [Clostridium beijerinckii NCIMB 8052]
          Length = 206

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HG  +K K S +G+QLR 
Sbjct: 1   MARYTGATCRLCRREGMKLFLKGDRCFTDKCAFVRRSYAPGQHGANKK-KVSNYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR+ +++A+  +G T  NL+  LE RLD IVYR  +  +   ARQ
Sbjct: 60  KQKARRIYG-ILEGQFRTYYEKAEHIKGITGENLLKLLEMRLDNIVYRLGYGSSRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY     DVI V +KS+         +   + +P+++  N DN
Sbjct: 119 LVTHGHFLVNGKKVDICSYHVSVNDVITVCEKSRSSEKFKTFVENP-KTLPKWLEANVDN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  PS  +D+  PV     L+VE YS+
Sbjct: 178 YEGKVVAEPSR-EDIDVPV--NETLIVELYSK 206


>gi|303247017|ref|ZP_07333293.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ]
 gi|302491724|gb|EFL51607.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ]
          Length = 208

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K +I RR G  L+ +       K     R Y PG HG+ RK K S + + LR 
Sbjct: 1   MARYTEAKCRICRREGAKLFLKGDRCYTDKCAYERRPYAPGQHGRIRK-KMSDYAVMLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR+ F+ AD  +G T  NL+ FLE R+D ++YR  F  +   ARQ
Sbjct: 60  KQKTRRMYG-ILEGQFRAYFQRADMKKGVTGENLLCFLERRMDNVIYRLGFANSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    VNGR V I S + K GDVIEV+++++Q   + EA Q +A R  P ++ V+ +
Sbjct: 119 LVRHGIFTVNGRRVTIPSLQVKVGDVIEVRERNRQSPIIQEAQQVIARRGCPAWLEVDGE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P+  +DV +P  +   L+VE YS+
Sbjct: 179 KLKGKVNALPTR-EDVQFP--INEQLIVELYSK 208


>gi|290890943|ref|ZP_06554007.1| hypothetical protein AWRIB429_1397 [Oenococcus oeni AWRIB429]
 gi|290479342|gb|EFD88002.1| hypothetical protein AWRIB429_1397 [Oenococcus oeni AWRIB429]
          Length = 250

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    K ++ RR+G +L G  K  +  R Y PG HG   R+ K S +  QLR KQK++
Sbjct: 47  MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 105

Query: 60  KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
             YG +SE++F ++F +A +  +G    N    LE+RLD++V+R     T   ARQ VNH
Sbjct: 106 FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 164

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+LV+G+ V I SY  K G +I V+++SK++  +L + + +  + P ++  + D +   
Sbjct: 165 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 223

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R P   +       +  +L+VE+Y+R
Sbjct: 224 LTRYPEREE---LGADINESLIVEYYNR 248


>gi|256847990|ref|ZP_05553434.1| ribosomal protein S4 [Lactobacillus coleohominis 101-4-CHN]
 gi|256715050|gb|EEU30027.1| ribosomal protein S4 [Lactobacillus coleohominis 101-4-CHN]
          Length = 202

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      ++ RR+G +L G  K  +  R Y PG HG  R+   S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWRLSRRLGVSLSGTGKE-LARRPYAPGDHGNDRRGSLSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++FK A + +  T   N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-LTERQFRNLFKRAGKIKEGTHGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY      VI V++KSK L  +  A   A    P Y+  + D +    
Sbjct: 119 HITVDGKRVDIPSYEVSVDQVIGVREKSKDLDIIKNAVD-AVVARPSYVEFDADKLEGKL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P+          +   L+VEFY++
Sbjct: 178 VRLPAR---EDMNADIDEALIVEFYNK 201


>gi|157825598|ref|YP_001493318.1| 30S ribosomal protein S4 [Rickettsia akari str. Hartford]
 gi|172047793|sp|A8GN35|RS4_RICAH RecName: Full=30S ribosomal protein S4
 gi|157799556|gb|ABV74810.1| 30S ribosomal protein S4 [Rickettsia akari str. Hartford]
          Length = 205

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 95/206 (46%), Positives = 136/206 (66%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDGKDAFNTRNYRPGQHGQNAMIKTSDYGLHLKAKQRLKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+FR++F  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H
Sbjct: 61  HYGRVTEKQFRNLFVLAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+  +I S R KEGDVI +K+  KQ+  + E+     +  P Y+S +  ++   ++
Sbjct: 121 IKLNGKKADIASIRLKEGDVIAIKESVKQIPLIQESVSKQGQTTPGYLSFDVHSLTGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYP   + +LV+E YSR
Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205


>gi|118586622|ref|ZP_01544062.1| 30S ribosomal protein S4 [Oenococcus oeni ATCC BAA-1163]
 gi|118432937|gb|EAV39663.1| 30S ribosomal protein S4 [Oenococcus oeni ATCC BAA-1163]
          Length = 250

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    K ++ RR+G +L G  K  +  R Y PG HG   R+ K S +  QLR KQK++
Sbjct: 47  MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 105

Query: 60  KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
             YG +SE++F ++F +A +  +G    N    LE+RLD++V+R     T   ARQ VNH
Sbjct: 106 FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 164

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+LV+G+ V I SY  K G +I V+++SK++  +L + + +  + P ++  + D +   
Sbjct: 165 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 223

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R P   +       +  +L+VE+Y+R
Sbjct: 224 LTRYPEREE---LGADINESLIVEYYNR 248


>gi|329766877|ref|ZP_08258405.1| 30S ribosomal protein S4 [Gemella haemolysans M341]
 gi|328837602|gb|EGF87227.1| 30S ribosomal protein S4 [Gemella haemolysans M341]
          Length = 200

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG   + K S +GLQL+ KQK++ 
Sbjct: 1   MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G ++EK+FR +F +A + +G    N ++ L +RLD++VY      T   ARQ VNH H
Sbjct: 60  LHG-MNEKQFRKLFDKAGKLQGLHGENFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV+G+ V+I SY  K G V+ V++KS+ L  + EA ++    VPEY++ + D +  + V
Sbjct: 119 VLVDGKKVDIASYAVKPGQVVSVREKSRNLEIIKEAVEITNF-VPEYLTFDADKLEGSLV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VE+YSR
Sbjct: 178 RLPERSELHP---EINEQLIVEYYSR 200


>gi|171060594|ref|YP_001792943.1| 30S ribosomal protein S4 [Leptothrix cholodnii SP-6]
 gi|226699083|sp|B1Y7N0|RS4_LEPCP RecName: Full=30S ribosomal protein S4
 gi|170778039|gb|ACB36178.1| ribosomal protein S4 [Leptothrix cholodnii SP-6]
          Length = 207

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        KS   ++   PG HG+   S+ S FGLQLR
Sbjct: 1   MARYLGPKAKLARREGTDLYLKSARRSISDKSKFESK---PGQHGRTSGSRTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F EADR +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-EKQFRRYFAEADRRKGNTGANLLLLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ V VNG+SVNI SY  K GDVI V++KSK+   +++A +LA+   +P ++SV+ 
Sbjct: 117 QLVSHKAVTVNGQSVNIPSYLVKAGDVISVREKSKKQLRIIDALKLADSIGLPAWVSVDL 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M   F + P   +   +   +  +L+VE YSR
Sbjct: 177 TKMEGIFKKAPDRDE---FGAEINESLIVELYSR 207


>gi|326692258|ref|ZP_08229263.1| 30S ribosomal protein S4 [Leuconostoc argentinum KCTC 3773]
          Length = 203

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K +I RR+G +L G  K  ++ R+Y PG HG  R++K S +G+QLR KQK++ 
Sbjct: 1   MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKVSEYGMQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F S+F +A + R  T   N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 60  TYG-LTERQFHSLFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGLATTRQQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY+   G VI V+ KSK +  +  A +      P+++S + D +  T 
Sbjct: 119 HILVDGQRVDIPSYQVTPGQVISVRDKSKNIVPIQVAVESVVAR-PQFVSFDADRLEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +       +   L+VE+Y+R
Sbjct: 178 VRSPEREE---LDADINEALIVEYYNR 201


>gi|319946013|ref|ZP_08020262.1| 30S ribosomal protein S4 [Streptococcus australis ATCC 700641]
 gi|322390490|ref|ZP_08064008.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 903]
 gi|319747821|gb|EFW00066.1| 30S ribosomal protein S4 [Streptococcus australis ATCC 700641]
 gi|321142764|gb|EFX38224.1| 30S ribosomal protein S4 [Streptococcus parasanguinis ATCC 903]
          Length = 203

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKEGTVGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|15675914|ref|NP_270088.1| 30S ribosomal protein S4 [Streptococcus pyogenes M1 GAS]
 gi|19747014|ref|NP_608150.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS8232]
 gi|21911369|ref|NP_665637.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS315]
 gi|28896741|ref|NP_803091.1| 30S ribosomal protein S4 [Streptococcus pyogenes SSI-1]
 gi|50915197|ref|YP_061169.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS10394]
 gi|71904527|ref|YP_281330.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS6180]
 gi|71911644|ref|YP_283194.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS5005]
 gi|94989474|ref|YP_597575.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS9429]
 gi|94991461|ref|YP_599561.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS10270]
 gi|94993361|ref|YP_601460.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS2096]
 gi|139474603|ref|YP_001129319.1| 30S ribosomal protein S4 [Streptococcus pyogenes str. Manfredo]
 gi|251783531|ref|YP_002997836.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|306826445|ref|ZP_07459757.1| 30S ribosomal protein S4 [Streptococcus pyogenes ATCC 10782]
 gi|54039513|sp|P66568|RS4_STRP3 RecName: Full=30S ribosomal protein S4
 gi|54039514|sp|P66569|RS4_STRP8 RecName: Full=30S ribosomal protein S4
 gi|54041965|sp|P66567|RS4_STRP1 RecName: Full=30S ribosomal protein S4
 gi|61215413|sp|Q5X9C7|RS4_STRP6 RecName: Full=30S ribosomal protein S4
 gi|90101729|sp|Q48QN5|RS4_STRPM RecName: Full=30S ribosomal protein S4
 gi|152112264|sp|Q1J995|RS4_STRPB RecName: Full=30S ribosomal protein S4
 gi|152112265|sp|Q1JJE2|RS4_STRPC RecName: Full=30S ribosomal protein S4
 gi|152112266|sp|Q1JEE1|RS4_STRPD RecName: Full=30S ribosomal protein S4
 gi|152112268|sp|A2RGZ8|RS4_STRPG RecName: Full=30S ribosomal protein S4
 gi|13623152|gb|AAK34809.1| 30S ribosomal protein S4 [Streptococcus pyogenes M1 GAS]
 gi|19749271|gb|AAL98649.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS8232]
 gi|21905585|gb|AAM80440.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS315]
 gi|28811995|dbj|BAC64924.1| 30S ribosomal protein S4 [Streptococcus pyogenes SSI-1]
 gi|50904271|gb|AAT87986.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS10394]
 gi|71803622|gb|AAX72975.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS6180]
 gi|71854426|gb|AAZ52449.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS5005]
 gi|94542982|gb|ABF33031.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS9429]
 gi|94544969|gb|ABF35017.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS10270]
 gi|94546869|gb|ABF36916.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS2096]
 gi|134272850|emb|CAM31130.1| 30S ribosomal protein S4 [Streptococcus pyogenes str. Manfredo]
 gi|242392163|dbj|BAH82622.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|304431375|gb|EFM34372.1| 30S ribosomal protein S4 [Streptococcus pyogenes ATCC 10782]
          Length = 203

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|317495364|ref|ZP_07953733.1| ribosomal protein S4 [Gemella moribillum M424]
 gi|316914423|gb|EFV35900.1| ribosomal protein S4 [Gemella moribillum M424]
          Length = 200

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG   + K S +GLQL+ KQK++ 
Sbjct: 1   MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G ++EK+FR +F +A + +G    N ++ L +RLD++VY      T   ARQ VNH H
Sbjct: 60  LHG-MNEKQFRKLFDKAGKLQGLHGENFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV+G+ V+I SY  K G V+ V++KS+ L  + EA ++    VPEY++ + D +  + V
Sbjct: 119 VLVDGKKVDIASYAVKPGQVVSVREKSRNLEIIKEAVEVTNF-VPEYLTFDADKLEGSLV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VE+YSR
Sbjct: 178 RLPERSELHP---EINEQLIVEYYSR 200


>gi|71901055|ref|ZP_00683165.1| Ribosomal protein S4, bacterial and organelle form [Xylella
           fastidiosa Ann-1]
 gi|71729182|gb|EAO31303.1| Ribosomal protein S4, bacterial and organelle form [Xylella
           fastidiosa Ann-1]
          Length = 208

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  R   PG HG  RKSK S +  QLR
Sbjct: 1   MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K A   +G+T  NL+  LE+RLD ++YR  F  T  AAR
Sbjct: 58  EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171
           Q V+HR VLVNG+ VN+ SY  K GDV+ + Q++++   V E+  + ++      +I V+
Sbjct: 117 QLVSHRSVLVNGKMVNLPSYHVKPGDVVALSQRAQKYLCVQESLTIKDQYGSAFSWIEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +     F  +P        P  +   L+VE YS+
Sbjct: 177 SEKFSGVFKALPDRAD---LPSDINEALIVELYSK 208


>gi|329770399|ref|ZP_08261781.1| 30S ribosomal protein S4 [Gemella sanguinis M325]
 gi|328836522|gb|EGF86182.1| 30S ribosomal protein S4 [Gemella sanguinis M325]
          Length = 200

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG   + K S +GLQL+ KQK++ 
Sbjct: 1   MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G ++EK+FR +F +A + +G    N ++ L +RLD++VY      T   ARQ VNH H
Sbjct: 60  LHG-MNEKQFRKLFDKAGKLQGLHGANFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K G V+ V++KS+ L  + EA ++    VPEY++ + D +  + V
Sbjct: 119 ILVDGKKVDIASYAVKPGQVVSVREKSRNLDIIKEAVEITNF-VPEYLTFDADKLEGSLV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +  P    +   L+VE+YSR
Sbjct: 178 RFPERSELHP---EINEQLIVEYYSR 200


>gi|330976664|gb|EGH76707.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 206

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQ R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQ-RRGRQSDYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +K+A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKKAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ V VNG++VN+ SY+ + GDV+ +++K+K    +++A  L A+R   E++ V+ +  
Sbjct: 119 SHKSVSVNGKTVNVPSYQVRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206


>gi|224370666|ref|YP_002604830.1| RpsD [Desulfobacterium autotrophicum HRM2]
 gi|259495274|sp|C0Q9U8|RS4_DESAH RecName: Full=30S ribosomal protein S4
 gi|223693383|gb|ACN16666.1| RpsD [Desulfobacterium autotrophicum HRM2]
          Length = 208

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS+   S  +  RR    L+ +       K   + RSY PG HGQ R+ K S +G+QLR 
Sbjct: 1   MSRYRGSVCRQCRRENMKLFLKGDRCFSDKCSFDRRSYPPGQHGQ-RRMKHSDYGIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I EK+FR IFK+AD  +G T   L+S LE RLD +V+R  F  +    R 
Sbjct: 60  KQKVRRIYG-IGEKQFRIIFKKADSLKGITGETLLSLLERRLDNVVFRLGFTSSRTQGRH 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
           FV H H  VNG+ VNI SY  K GDV+E+K+KSK++ ++ ++      R VP+++ ++ D
Sbjct: 119 FVRHNHFTVNGKKVNIPSYIIKAGDVVELKEKSKKVQAITDSLDTVVRRGVPQWLELDKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P+  +D+  P  +Q  L+VE YS+
Sbjct: 179 GFKGVVKGMPAR-EDITLP--IQEQLIVELYSK 208


>gi|56964521|ref|YP_176252.1| 30S ribosomal protein S4 [Bacillus clausii KSM-K16]
 gi|61215394|sp|Q5WEB9|RS4_BACSK RecName: Full=30S ribosomal protein S4
 gi|56910764|dbj|BAD65291.1| 30S ribosomal protein S4 [Bacillus clausii KSM-K16]
          Length = 200

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG  ++ K S + LQL  KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGVSLSGTGKE-LAKRPYAPGQHGPNQRKKLSEYALQLHEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F   F +A +  G    N +  LESRLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-VNERQFLRTFNDAGKMNGIHGENFMILLESRLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV+G  V+I SYR K G  I ++++S+ L  V EA  + +   P Y+S + + +  T+ 
Sbjct: 119 VLVDGSRVDIPSYRVKPGQTIGLRERSRNLTVVKEALDVNDFT-PGYVSFDEEKLEGTYT 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P  +   L+VE+YSR
Sbjct: 178 RYPERSE---LPAEITEALIVEWYSR 200


>gi|125719124|ref|YP_001036257.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK36]
 gi|125499041|gb|ABN45707.1| 30S ribosomal protein S4, putative [Streptococcus sanguinis SK36]
 gi|325686442|gb|EGD28471.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK72]
 gi|325698067|gb|EGD39948.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK160]
 gi|327463801|gb|EGF10117.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1057]
 gi|327467659|gb|EGF13156.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK330]
 gi|327471574|gb|EGF17017.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK408]
 gi|328945138|gb|EGG39293.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1087]
          Length = 245

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 43  MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 101

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +      N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 102 TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 160

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 161 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 219

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VEFY++
Sbjct: 220 TRLPERDE---INPEINEALIVEFYNK 243


>gi|171778571|ref|ZP_02919698.1| hypothetical protein STRINF_00550 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282794|gb|EDT48218.1| hypothetical protein STRINF_00550 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 203

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGSGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VE+Y++
Sbjct: 178 TRLPERDE---INPEINEALIVEYYNK 201


>gi|239947523|ref|ZP_04699276.1| ribosomal protein S4 [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921799|gb|EER21823.1| ribosomal protein S4 [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 205

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 98/206 (47%), Positives = 138/206 (66%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+FR+IF  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H
Sbjct: 61  HYGRVTEKQFRNIFVLAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+  +I S R KEGDVIEVK+  KQ++ + E+     +  P Y+S +  ++   ++
Sbjct: 121 IKLNGKKADIASIRLKEGDVIEVKESVKQISLIQESVSKQGQTTPGYLSFDVPSLTGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYP   + +LV+E YSR
Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205


>gi|239905883|ref|YP_002952622.1| 30S ribosomal protein S4 [Desulfovibrio magneticus RS-1]
 gi|259495275|sp|C4XLK2|RS4_DESMR RecName: Full=30S ribosomal protein S4
 gi|239795747|dbj|BAH74736.1| 30S ribosomal protein S4 [Desulfovibrio magneticus RS-1]
          Length = 208

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K +I RR G  L+ +       K     R Y PG HG+ RK K S + +QLR 
Sbjct: 1   MARYTEAKCRICRREGAKLFLKGDRCYTDKCAHERRPYAPGQHGRIRK-KMSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK +K YG I E++FR  FK AD  +G T  NL+S LE RLD  +YR  F  +   ARQ
Sbjct: 60  KQKTRKMYG-ILEEQFRDYFKRADMQKGVTGENLLSALERRLDNTIYRLGFATSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NGR VNI S + K GDVIEV+++++Q   +LEA Q +A R  P ++ V  +
Sbjct: 119 LVRHGLFTLNGRRVNIPSLQVKVGDVIEVRERNRQSPIILEAQQVIARRGTPAWLEVEGE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    + +P+  +DV +P  +   L+VE YS+
Sbjct: 179 KLKGKVIALPTR-EDVQFP--INEQLIVELYSK 208


>gi|298531061|ref|ZP_07018462.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509084|gb|EFI32989.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 208

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   SK ++ RR G  L  +       K     R+Y PG HG+ RK K S + LQLR 
Sbjct: 1   MARYTDSKCRLCRREGTKLLLKGDRCYTDKCAYERRAYPPGEHGRARK-KSSDYALQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +F+  F+ AD  +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVRRMYG-LLEGQFKRYFEIADSRKGATGTNLLVMLERRLDNVVYRMGFANSRSQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  +NG  VN+ S   KEGDVI V +KS+++  + +A   LA R  P+++ +N  
Sbjct: 119 LVRHGHFHINGTRVNVPSILLKEGDVIGVIEKSRKMPVIQDARDVLARRGSPDWLEINDQ 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P+  +D+ +P  +   L+VE YS+
Sbjct: 179 EFKGTVKTLPAR-EDITFP--INEQLIVELYSK 208


>gi|78221872|ref|YP_383619.1| 30S ribosomal protein S4 [Geobacter metallireducens GS-15]
 gi|90101690|sp|Q39XY0|RS4_GEOMG RecName: Full=30S ribosomal protein S4
 gi|78193127|gb|ABB30894.1| SSU ribosomal protein S4P [Geobacter metallireducens GS-15]
          Length = 208

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K  +  R+Y PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYTGPSCRLCRRENMELFLKGERCYTDKCAIKRRNYPPGQHGQGRP-KVSNYGIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+FRS F+EADR RG T  NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVRRIYGVL-EKQFRSYFEEADRMRGVTGENLLSLLERRLDNVVYRLGFASSRTEARI 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NGR  NI S + K GDV+ +K+KS+++A + E+      R  P+++ ++ +
Sbjct: 119 LVRHNHFTLNGRKANIPSIQLKAGDVVVLKEKSRKIACINESLDAVVRRGTPQWLELDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P+  +D+  P  +Q  L+VE YS+
Sbjct: 179 GYKGVVKLLPAR-EDIAMP--IQEQLIVELYSK 208


>gi|56808368|ref|ZP_00366123.1| COG0522: Ribosomal protein S4 and related proteins [Streptococcus
           pyogenes M49 591]
          Length = 203

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLKGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|239787587|emb|CAX84055.1| 30S ribosomal protein S4 [uncultured bacterium]
          Length = 208

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   SK ++ RR    L+ +       K  +  R+YGPGLHGQRR+ K S +G+ LR 
Sbjct: 1   MARYFGSKCRLCRREAAKLFLKGEKCYSDKCAMERRNYGPGLHGQRRR-KVSDYGVHLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ Y  + EK+F + F++A R  G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKIKRTYC-LLEKQFHNYFQKAARMPGVTGENLLILLERRLDNVVYRLGFSSSRSEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V+H+ +LVNG+ +NI SY  K GD I V ++ K    +  A   A  R  P ++ V+  
Sbjct: 119 VVSHKQILVNGKPINICSYLVKPGDKIAVNEQCKAHLRIKAALDHAMRRSFPSWLEVDPV 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M  TF+  P        P     NL+VE YS+
Sbjct: 179 AMSGTFLSFPDRAD---LPADYNENLIVELYSK 208


>gi|70732860|ref|YP_262627.1| 30S ribosomal protein S4 [Pseudomonas fluorescens Pf-5]
 gi|90101707|sp|Q4K556|RS4_PSEF5 RecName: Full=30S ribosomal protein S4
 gi|68347159|gb|AAY94765.1| ribosomal protein S4 [Pseudomonas fluorescens Pf-5]
          Length = 206

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG+HGQRR  +  Y G QLR KQ
Sbjct: 1   MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDY-GTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +K+A   +G T  NL+  LE RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-ERQFSGYYKQAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG++VN+ SY+ + GDV+ V++K+K    +++A  L A+R   E++ V+ +  
Sbjct: 119 SHKSISVNGQTVNVPSYQVRAGDVVAVREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P+          +  +L+VE YS+
Sbjct: 179 SGVFKNVPARSD---LSADINESLIVELYSK 206


>gi|241889823|ref|ZP_04777121.1| ribosomal protein S4 [Gemella haemolysans ATCC 10379]
 gi|241863445|gb|EER67829.1| ribosomal protein S4 [Gemella haemolysans ATCC 10379]
          Length = 200

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K  RR+G +L G  K  +  R Y PG HG   + K S +GLQL+ KQK++ 
Sbjct: 1   MARFTGSTWKKSRRLGISLSGTGKE-LAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G ++EK+FR +F +A + +G    N ++ L +RLD++VY      T   ARQ VNH H
Sbjct: 60  LHG-MNEKQFRKLFDKAGKLQGLHGENFMALLATRLDSVVYSLGLARTNRQARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV+G+ V+I SY  K G V+ V++KS+ L  V EA ++    VPEY++ + D +  + V
Sbjct: 119 VLVDGKKVDIASYAVKPGQVVSVREKSRNLEIVKEAVEITNF-VPEYLTFDADKLEGSLV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    +   L+VE+YSR
Sbjct: 178 RLPERSELHP---EINEQLIVEYYSR 200


>gi|118602237|ref|YP_903452.1| SSU ribosomal protein S4P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|152112257|sp|A1AVM4|RS4_RUTMC RecName: Full=30S ribosomal protein S4
 gi|118567176|gb|ABL01981.1| SSU ribosomal protein S4P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 208

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 126/212 (59%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQR-RKSKPSYFGLQLRAK 55
           M++      K+ RR G +L+ +     ++++      PG+HG   R+ K + +GLQLR K
Sbjct: 1   MARYTGPTCKLARREGTDLFLKSGIRSLDSKCNVTQLPGMHGANARRQKGTEYGLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG I EK+FR  +K+A + +G T  NL+S LE RLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRIYG-ILEKQFRLYYKKASQKKGSTGENLLSLLECRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDN 174
           V+H+ +L+NG  VNI SY+    D I +++K+K+ + +  A +LAE+   P+++ ++H  
Sbjct: 120 VSHKSILMNGLVVNIPSYQVSVNDEISIREKAKKQSRIQLALELAEQSTQPQWLDIDHKA 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F  +P+  +       +Q +L+VE YS+
Sbjct: 180 LKGVFKNVPARDE---LSSDIQEHLIVELYSK 208


>gi|218249063|ref|YP_002374434.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 8801]
 gi|257062150|ref|YP_003140038.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 8802]
 gi|226697833|sp|B7JVE5|RS4_CYAP8 RecName: Full=30S ribosomal protein S4
 gi|218169541|gb|ACK68278.1| ribosomal protein S4 [Cyanothece sp. PCC 8801]
 gi|256592316|gb|ACV03203.1| ribosomal protein S4 [Cyanothece sp. PCC 8802]
          Length = 202

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+P   R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLSRKNP--RRAYPPGQHGQARKKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E +     K+A R+ G T   L+  LE RLD  V+R     TI AARQ VNH H
Sbjct: 58  NYG-VTEGQLIRYVKKARRATGSTGQKLLELLEMRLDNTVFRLGMAGTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+C+ G+VI V+ + +    V    Q     ++P ++  + + +    
Sbjct: 117 ITVNGKVVDIPSYQCRPGEVIAVRNQERSRRLVEANMQYPGLANLPSHLEFDKNTLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NAVIER---EWIALQINELLVVEYYSR 200


>gi|322436519|ref|YP_004218731.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX9]
 gi|321164246|gb|ADW69951.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX9]
          Length = 210

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 12/214 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPS-YFGLQLR 53
           M++      ++ RR G  L+ +       K PV  R++ PG HGQ RK K    +GLQLR
Sbjct: 1   MARYTGPVCRMCRRDGVKLFLKGSKCFTEKCPVEKRNFPPGQHGQSRKVKKVVGYGLQLR 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK K+ Y  + E +FR+ +++A    G T   L+  LE+RLD + YR     +   AR
Sbjct: 61  EKQKAKRIYFTL-ETQFRAYYQKAANKTGVTGDLLLQQLETRLDNVCYRLGLATSRRQAR 119

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V H H+ VNGR VNI S++CK GD I V++ SK L+    A   A       ++ +N 
Sbjct: 120 QVVRHGHIQVNGRKVNIPSFQCKVGDEIAVREGSKTLSFFETAKDFAGGLQSVTWLDINR 179

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D +    V +P   +DV  PV     L+VE YS+
Sbjct: 180 DTLSGKVVMLPKR-EDVQLPV--NEQLIVELYSK 210


>gi|300172651|ref|YP_003771816.1| 30S ribosomal protein S4 [Leuconostoc gasicomitatum LMG 18811]
 gi|299887029|emb|CBL90997.1| 30S ribosomal protein S4 [Leuconostoc gasicomitatum LMG 18811]
          Length = 203

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K +I RR+G +L G  K  ++ R+Y PG HG  R++K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F S+F +A + R  T   N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 60  TYG-LTERQFHSLFNKAGKIRKGTHGTNFMILLEQRLDSLVYRLGLATTRQQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H++V+ + V+I S+    G VI V+ KSK +  +  A +      P+++S + + +  + 
Sbjct: 119 HIMVDSKRVDIPSFSVTPGQVISVRDKSKTIVPIQVAVESV-VGHPQFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +  +L+VE+Y+R
Sbjct: 178 VRLPEREE---LDADINESLIVEYYNR 201


>gi|46579739|ref|YP_010547.1| 30S ribosomal protein S4 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602784|ref|YP_967184.1| 30S ribosomal protein S4 [Desulfovibrio vulgaris DP4]
 gi|61215610|sp|Q72CF5|RS4_DESVH RecName: Full=30S ribosomal protein S4
 gi|152060946|sp|A1VE91|RS4_DESVV RecName: Full=30S ribosomal protein S4
 gi|46449154|gb|AAS95806.1| ribosomal protein S4 [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563013|gb|ABM28757.1| SSU ribosomal protein S4P [Desulfovibrio vulgaris DP4]
 gi|311233530|gb|ADP86384.1| ribosomal protein S4 [Desulfovibrio vulgaris RCH1]
          Length = 208

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +K +  RR G  L+ +       K   + R Y PG HG+ RK K S + +QLR 
Sbjct: 1   MAKYTDAKCRQCRREGTKLFLKGDRCFTDKCAFDRRPYAPGQHGRARK-KVSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E++F + F +AD ++G T  NL+S LE RLD ++YR  F  +   ARQ
Sbjct: 60  KQKVRRMYG-ILEQQFHAYFTKADMAKGVTGANLLSLLERRLDNVIYRLGFANSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NGR VNI S + + GD IEV +KS+++  + EA + +A R  P ++  +  
Sbjct: 119 LVRHGIFTLNGRKVNIPSLQVRIGDTIEVPEKSRKIPVLAEAQEVIARRGCPAWLEADGA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N       +P   +D+ +P  +  +L+VE YS+
Sbjct: 179 NFRGVVKALPQR-EDIQFP--INEHLIVELYSK 208


>gi|194334835|ref|YP_002016695.1| 30S ribosomal protein S4 [Prosthecochloris aestuarii DSM 271]
 gi|226699104|sp|B4S5A2|RS4_PROA2 RecName: Full=30S ribosomal protein S4
 gi|194312653|gb|ACF47048.1| ribosomal protein S4 [Prosthecochloris aestuarii DSM 271]
          Length = 203

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 121/207 (58%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R Y PG HGQ R+SK S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGVALAPKAEKYLERRPYAPGEHGQSRRSKISEYALQLREKQKMKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+ +K+A   RG T  NL+  LE R D +V+RA F P+   ARQ V H H
Sbjct: 61  LYGVL-EKQFRNYYKKAVAQRGVTGDNLVKLLERRFDNVVFRAGFSPSRAGARQLVTHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+  K GD IE ++KSK + +V E+   A E  +P +I V+  +  A F
Sbjct: 120 MLVNGRKVNIPSFLMKPGDAIEFREKSKNMDAVTESLNKAPESRIPSWIQVDKAHQKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P   +           LVVE YS+
Sbjct: 180 LTVPEREE---VQEPFNEQLVVELYSK 203


>gi|94968282|ref|YP_590330.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis
           Ellin345]
 gi|152060923|sp|Q1IS94|RS4_ACIBL RecName: Full=30S ribosomal protein S4
 gi|94550332|gb|ABF40256.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis
           Ellin345]
          Length = 209

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 116/213 (54%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++ + +  ++ RR G  L+ +       K  +  R++ PG HG+ RK+K   +GLQLR 
Sbjct: 1   MARYKDAVCRLCRREGTKLFLKGPKCFTDKCAIEKRNFAPGQHGKDRKAKIVGYGLQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ Y    E +FR+ F++A + +G T   L+  LE RLD +VYR  F      ARQ
Sbjct: 61  KQKTKRMYFA-QENQFRNYFEKAAKGQGVTGEMLLQQLERRLDNVVYRLGFASARRQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+ VNG+ VNI SY+    D I V++ SK++  + +  +L +   VP ++ V+ D
Sbjct: 120 LVRHGHIAVNGKKVNIPSYQVSVKDEIAVREGSKEMTLLGQIKELTSHTTVPGWLIVDRD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N   +   +P   +     + +   L+VE YS+
Sbjct: 180 NWKGSVSSLPRRDE---IQMPVNEQLIVELYSK 209


>gi|253682663|ref|ZP_04863460.1| ribosomal protein S4 [Clostridium botulinum D str. 1873]
 gi|253562375|gb|EES91827.1| ribosomal protein S4 [Clostridium botulinum D str. 1873]
          Length = 206

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HGQ RK   +Y G+QLR 
Sbjct: 1   MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR  +++A+  RG T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLKLLEMRLDNVVYRLGFGSSRSEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I S++   GDVI V++KS+        ++   + +P ++  N +N
Sbjct: 119 LVTHGHFLVNGKKVDIASFKVSAGDVITVREKSRGTEKFKTFAENP-KTLPAWLQGNVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  P+        V +   L+VE YS+
Sbjct: 178 FEGKVIAEPTRTD---IDVPVNETLIVELYSK 206


>gi|313889497|ref|ZP_07823143.1| ribosomal protein S4 [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122109|gb|EFR45202.1| ribosomal protein S4 [Streptococcus pseudoporcinus SPIN 20026]
          Length = 203

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + K S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRGKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|324989545|gb|EGC21491.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK353]
          Length = 245

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 43  MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 101

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +      N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 102 TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 160

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 161 HILVDGKRVDIPSYRVNPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 219

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VEFY++
Sbjct: 220 TRLPERDE---INPEINEALIVEFYNK 243


>gi|222153933|ref|YP_002563110.1| 30S ribosomal protein S4 [Streptococcus uberis 0140J]
 gi|254764614|sp|B9DWC7|RS4_STRU0 RecName: Full=30S ribosomal protein S4
 gi|222114746|emb|CAR43894.1| 30S ribosomal protein S4 [Streptococcus uberis 0140J]
          Length = 203

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKEGTLGFNFMILLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|39997924|ref|NP_953875.1| 30S ribosomal protein S4 [Geobacter sulfurreducens PCA]
 gi|61215647|sp|Q749B2|RS4_GEOSL RecName: Full=30S ribosomal protein S4
 gi|39984869|gb|AAR36225.1| ribosomal protein S4 [Geobacter sulfurreducens PCA]
 gi|307635098|gb|ADI85585.2| ribosomal protein S4 [Geobacter sulfurreducens KN400]
          Length = 208

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K  +  R+Y PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYTGPSCRLCRRENMELFLKGERCYTDKCAIKRRNYPPGQHGQGRP-KVSNYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I EK+FRS F+EADR +G T  NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVRRIYG-ILEKQFRSYFQEADRLKGVTGENLLSLLERRLDNVVYRLGFAASRTEARI 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NG+  NI S + + GDV+E+K+KS+++A + E+      R +P+++ +  D
Sbjct: 119 LVRHNHFTLNGKKANIPSIQLRAGDVVELKEKSRKIACINESLDAVVRRGIPQWLELEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P   +D+  P  +Q  L+VE YS+
Sbjct: 179 AYKGVVKTLPVR-EDITMP--IQEQLIVELYSK 208


>gi|115314194|ref|YP_762917.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|122325768|sp|Q0BNQ4|RS4_FRATO RecName: Full=30S ribosomal protein S4
 gi|115129093|gb|ABI82280.1| ribosomal protein S4 [Francisella tularensis subsp. holarctica
           OSU18]
          Length = 206

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     N      +  PG HG  R+++ S +GLQLR KQ
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E +F+  + EA R +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H+ ++VNG + N+ S + K GDV+ V++K+K+   +  A +LA+ R    +I VN D++
Sbjct: 119 VHKGIMVNGHTCNVPSAQVKVGDVVAVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T    P   +       +   L++E YS+
Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206


>gi|315646149|ref|ZP_07899269.1| ribosomal protein S4 [Paenibacillus vortex V453]
 gi|315278348|gb|EFU41664.1| ribosomal protein S4 [Paenibacillus vortex V453]
          Length = 200

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR+G +L G  K  +  R + PG HG  ++ K S +G+QL+ KQK++ 
Sbjct: 1   MARYTGPKFKLSRRLGISLSGTGKE-LAKRPFPPGQHGPNQRRKVSNYGMQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F+++F +A   +G    N +  LESRLD +VYR  F  +   ARQ V H H
Sbjct: 60  MYG-LGEKQFKTLFNKATSMKGIAGENFMFLLESRLDNLVYRLGFSNSRAGARQLVAHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SY    GDVI ++++S+ L+S+ EA       +P YI ++  +M   ++
Sbjct: 119 VTVNGKKVDIASYAVSTGDVIGLRERSRSLSSIKEALA-NRVHLPAYIELDEASMEGKYI 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFY+R
Sbjct: 178 RLPERSE---LSQDIDEKQIVEFYNR 200


>gi|116628655|ref|YP_821274.1| 30S ribosomal protein S4 [Streptococcus thermophilus LMD-9]
 gi|90101730|sp|Q5LXK5|RS4_STRT1 RecName: Full=30S ribosomal protein S4
 gi|90101731|sp|Q5M255|RS4_STRT2 RecName: Full=30S ribosomal protein S4
 gi|122266751|sp|Q03I94|RS4_STRTD RecName: Full=30S ribosomal protein S4
 gi|116101932|gb|ABJ67078.1| SSU ribosomal protein S4P [Streptococcus thermophilus LMD-9]
 gi|312279309|gb|ADQ63966.1| 30S ribosomal protein S4 [Streptococcus thermophilus ND03]
          Length = 203

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGFSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG +SEK+FR++F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LSEKQFRNLFVQATKVKGGTLGFNFMILLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVE-ATIGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|309389907|gb|ADO77787.1| SSU ribosomal protein S4P [Halanaerobium praevalens DSM 2228]
          Length = 208

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +   S  K+ RR GE L+ +       K   + R Y PG HGQ R  K S +G QLR 
Sbjct: 1   MGRYTGSVCKLCRREGEKLYLKGARCYSDKCSFDRRPYVPGEHGQGR-HKVSEYGTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I EK+FR+ F++A+   G T  N +  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVRRIYG-IMEKQFRNYFEKAENIAGVTGENFLQLLERRLDNVVYRMGFASSRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
           FV H H+ VNGR V+I SY+    D I+VK  S++     E  +  A+    E+++ + +
Sbjct: 119 FVLHGHITVNGRKVDIPSYQIDIDDEIKVKDSSRKSKRFKEIFEYNADFASQEWLNSDLE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T + +P   +D+ YPV  + +L+VE+YSR
Sbjct: 179 KAEGTIIALPER-EDIDYPV--EEHLIVEYYSR 208


>gi|186682136|ref|YP_001865332.1| 30S ribosomal protein S4 [Nostoc punctiforme PCC 73102]
 gi|226699095|sp|B2J1M8|RS4_NOSP7 RecName: Full=30S ribosomal protein S4
 gi|186464588|gb|ACC80389.1| ribosomal protein S4 [Nostoc punctiforme PCC 73102]
          Length = 202

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KS    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRKKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     ++A R  G T   L+  LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-LTEKQLLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRLGIAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR VNI SY+C+ G+VI V+ +++    V    Q     ++P ++  + + +V   
Sbjct: 117 VTVNGRVVNIASYQCRPGEVIAVRDRAQSRKLVEANLQYPGLANLPSHLEFDKNKLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200


>gi|56707502|ref|YP_169398.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|89255694|ref|YP_513055.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           LVS]
 gi|110669973|ref|YP_666530.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|118496876|ref|YP_897926.1| 30S ribosomal protein S4 [Francisella tularensis subsp. novicida
           U112]
 gi|156501642|ref|YP_001427707.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010989|ref|ZP_02275920.1| ribosomal protein S4 [Francisella tularensis subsp. holarctica
           FSC200]
 gi|194324098|ref|ZP_03057872.1| ribosomal protein S4 [Francisella tularensis subsp. novicida FTE]
 gi|208780324|ref|ZP_03247665.1| ribosomal protein S4 [Francisella novicida FTG]
 gi|224456565|ref|ZP_03665038.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254367075|ref|ZP_04983110.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           257]
 gi|254368645|ref|ZP_04984660.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           FSC022]
 gi|254370809|ref|ZP_04986814.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254372233|ref|ZP_04987724.1| 30S ribosomal protein S4 [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373715|ref|ZP_04989198.1| 30S ribosomal protein S4 [Francisella novicida GA99-3548]
 gi|254874322|ref|ZP_05247032.1| 30S ribosomal protein S4 rpsD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290953189|ref|ZP_06557810.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313557|ref|ZP_06804146.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|61215374|sp|Q5NHU4|RS4_FRATT RecName: Full=30S ribosomal protein S4
 gi|122501251|sp|Q2A5E6|RS4_FRATH RecName: Full=30S ribosomal protein S4
 gi|123359595|sp|Q14J96|RS4_FRAT1 RecName: Full=30S ribosomal protein S4
 gi|152060948|sp|A0Q4K7|RS4_FRATN RecName: Full=30S ribosomal protein S4
 gi|171769925|sp|A7N9U8|RS4_FRATF RecName: Full=30S ribosomal protein S4
 gi|54113157|gb|AAV29212.1| NT02FT0049 [synthetic construct]
 gi|56603994|emb|CAG44982.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|89143525|emb|CAJ78701.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           LVS]
 gi|110320306|emb|CAL08365.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|118422782|gb|ABK89172.1| 30S ribosomal protein S4 [Francisella novicida U112]
 gi|134252900|gb|EBA51994.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           257]
 gi|151569052|gb|EDN34706.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           FSC033]
 gi|151569962|gb|EDN35616.1| 30S ribosomal protein S4 [Francisella novicida GA99-3549]
 gi|151571436|gb|EDN37090.1| 30S ribosomal protein S4 [Francisella novicida GA99-3548]
 gi|156252245|gb|ABU60751.1| ribosomal protein S4 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157121553|gb|EDO65738.1| 30S ribosomal protein S4 [Francisella tularensis subsp. holarctica
           FSC022]
 gi|194321545|gb|EDX19029.1| ribosomal protein S4 [Francisella tularensis subsp. novicida FTE]
 gi|208743692|gb|EDZ89995.1| ribosomal protein S4 [Francisella novicida FTG]
 gi|254840321|gb|EET18757.1| 30S ribosomal protein S4 rpsD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158646|gb|ADA78037.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           NE061598]
 gi|328675431|gb|AEB28106.1| SSU ribosomal protein S4p (S9e) [Francisella cf. novicida 3523]
 gi|328676345|gb|AEB27215.1| SSU ribosomal protein S4p (S9e) [Francisella cf. novicida Fx1]
          Length = 206

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     N      +  PG HG  R+++ S +GLQLR KQ
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E +F+  + EA R +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H+ ++VNG + N+ S + K GDV+ V++K+K+   +  A +LA+ R    +I VN D++
Sbjct: 119 VHKGIMVNGHTCNVPSAQVKAGDVVAVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T    P   +       +   L++E YS+
Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206


>gi|134302562|ref|YP_001122532.1| 30S ribosomal protein S4 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|152060949|sp|A4IZR0|RS4_FRATW RecName: Full=30S ribosomal protein S4
 gi|134050339|gb|ABO47410.1| ribosomal protein S4 [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 206

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     N      +  PG HG  R+++ S +GLQLR KQ
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E +F+  + EA R +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H+ ++VNG + N+ S + K GDV+ V++K+K+   +  A +LA+ R    +I VN D++
Sbjct: 119 VHKGIMVNGHTCNVPSAQVKAGDVVTVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T    P   +       +   L++E YS+
Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206


>gi|331268441|ref|YP_004394933.1| 30S ribosomal protein S4 [Clostridium botulinum BKT015925]
 gi|329124991|gb|AEB74936.1| ribosomal protein S4 [Clostridium botulinum BKT015925]
          Length = 206

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HGQ RK   +Y G+QLR 
Sbjct: 1   MARYIGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGQGRKKLSNY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR  +++A+  RG T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKARRIYG-ILEAQFRKYYEKAETMRGITGENLLRLLEMRLDNVVYRLGFGSSRSEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I S++   GDVI V++KS+        ++   + +P ++  N +N
Sbjct: 119 LVTHGHFLVNGKKVDIASFKVSAGDVITVREKSRGTEKFKTFAENP-KTLPAWLQGNVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  P+        V +   L+VE YS+
Sbjct: 178 FEGKVIAEPTRTD---IDVPVNETLIVELYSK 206


>gi|94995345|ref|YP_603443.1| 30S ribosomal protein S4 [Streptococcus pyogenes MGAS10750]
 gi|152112267|sp|Q1J462|RS4_STRPF RecName: Full=30S ribosomal protein S4
 gi|94548853|gb|ABF38899.1| SSU ribosomal protein S4P [Streptococcus pyogenes MGAS10750]
          Length = 203

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +    
Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGAL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|302877826|ref|YP_003846390.1| 30S ribosomal protein S4 [Gallionella capsiferriformans ES-2]
 gi|302580615|gb|ADL54626.1| ribosomal protein S4 [Gallionella capsiferriformans ES-2]
          Length = 209

 Score =  207 bits (528), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K +  RR GE L+ +       K  V  R+Y PG HGQRR ++ S +G QLR 
Sbjct: 1   MARNLDAKCRKCRREGEKLFLKGEKCFTDKCAVERRAYPPGQHGQRRNTRLSEYGGQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++FR  +K+A+ SRG T  +L+  LESRLD + YR  F  +   ARQ
Sbjct: 61  KQKVRRIYGVL-ERQFRLTYKKAEASRGITGESLLQLLESRLDNVSYRMGFGASRAEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  +LVNG+ VNI SY+ + GDV+EV +KSK    +  A   AE R  PE+I ++  
Sbjct: 120 VVRHNALLVNGKRVNIPSYQVRPGDVVEVAEKSKAQLRIKAAIAAAETRGFPEWIEMDTK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF   P   +    P  +  +LVVE YS+
Sbjct: 180 AFKGTFKANPQRAE---LPATINEHLVVELYSK 209


>gi|119358165|ref|YP_912809.1| 30S ribosomal protein S4 [Chlorobium phaeobacteroides DSM 266]
 gi|152060943|sp|A1BJ08|RS4_CHLPD RecName: Full=30S ribosomal protein S4
 gi|119355514|gb|ABL66385.1| SSU ribosomal protein S4P [Chlorobium phaeobacteroides DSM 266]
          Length = 203

 Score =  207 bits (528), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R + PG HGQ RK K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGIALSPKAEKYLERRPFAPGQHGQSRKGKISEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E +FRS +++A   RG T  NL+  LE R D +V+R+ F  +  AARQ V H H
Sbjct: 61  LYGVL-ENQFRSYYRKAVSQRGVTGDNLVKLLERRFDNVVFRSGFAASRSAARQLVTHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           + +NG+ VNI SY    G++IE +QKSK + +V ++   A +  +P +I V+  N  A F
Sbjct: 120 LTINGKKVNIPSYLLTPGELIEFRQKSKNMGAVTDSLNKAPDARIPSWIQVDKANQKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P   +           LVVE YS+
Sbjct: 180 LSVPEREE---VQEPFNEQLVVELYSK 203


>gi|46911985|emb|CAG18783.1| putative ribosomal protein S4 [Photobacterium profundum SS9]
          Length = 202

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 124/207 (59%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  R+ + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGA-RRGRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V+H+ 
Sbjct: 60  TYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGSTRAESRQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNG  VN+ S++    DV+ +++K+K  A +  A ++A +R++P ++ V++  +  TF
Sbjct: 119 ILVNGTVVNVPSFKVAANDVVSIREKAKNQARIKAALEVATQRELPTWVEVDNSKLEGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P           +  +L+VE YS+
Sbjct: 179 KRLPERSD---LSADINEHLIVELYSK 202


>gi|323144988|ref|ZP_08079548.1| ribosomal protein S4 [Succinatimonas hippei YIT 12066]
 gi|322415267|gb|EFY06041.1| ribosomal protein S4 [Succinatimonas hippei YIT 12066]
          Length = 207

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K      K+ RR G +L+ +     + T+      PG HG   K + S +G+QLR KQ
Sbjct: 1   MAKYTGPALKLSRREGVDLFLKSGVRAIETKCKLDTAPGQHGAN-KPRLSDYGMQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +K+A +  G+T  NL+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKKAAKMSGNTGENLLQLLESRLDNVVYRMGFGSTRMEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDN 174
           +H+ + VN   VNI SY+ +  DVI V++K+K+   +  A  L+ +    P +I V+H+ 
Sbjct: 119 SHKAITVNDHVVNIPSYQVQPSDVIAVREKAKKQLRIKAAIDLSGQRALKPTWIDVDHNA 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           M  T+   P   +    P  ++  L+VE YS+
Sbjct: 179 MKGTYKNKPERSE---LPSDIKEQLIVELYSK 207


>gi|51473540|ref|YP_067297.1| 30S ribosomal protein S4 [Rickettsia typhi str. Wilmington]
 gi|61215500|sp|Q68X27|RS4_RICTY RecName: Full=30S ribosomal protein S4
 gi|51459852|gb|AAU03815.1| 30S ribosomal protein S4 [Rickettsia typhi str. Wilmington]
          Length = 205

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 96/206 (46%), Positives = 137/206 (66%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG ++EK+FR+ F  A R +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H
Sbjct: 61  YYGRVTEKQFRNTFALAQRMQGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+  +I S R KEGD+IE+K+  +Q+  + E+     +  P+Y+S +  ++   ++
Sbjct: 121 IKLNGKKADIASIRLKEGDIIEIKESIQQIPLIQESIAKQGQTTPKYLSFDVSSLTGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYP   + +LV+E YSR
Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205


>gi|124268602|ref|YP_001022606.1| 30S ribosomal protein S4 [Methylibium petroleiphilum PM1]
 gi|152112230|sp|A2SLD2|RS4_METPP RecName: Full=30S ribosomal protein S4
 gi|124261377|gb|ABM96371.1| SSU ribosomal protein S4P [Methylibium petroleiphilum PM1]
          Length = 207

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        KS   T+   PG HG+   S+ S FGLQLR
Sbjct: 1   MARYLGPKAKLARREGTDLFLKSARRAIGDKSKFETK---PGQHGRTSGSRTSDFGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EA+R +G+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-ERQFRRYFAEAERRKGNTGANLLLLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q V+H+ + VNG  VNI SY  K GDV+ V++K+K+   V E+ +LAE   +P ++ V+ 
Sbjct: 117 QLVSHKGITVNGEVVNIASYLVKTGDVVAVREKAKKQLRVTESLKLAESMGLPAWVQVDA 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   F + P   +   +   +  +L+VE YSR
Sbjct: 177 TKLEGVFKKSPDRDE---FGSDINESLIVELYSR 207


>gi|325104842|ref|YP_004274496.1| SSU ribosomal protein S4P [Pedobacter saltans DSM 12145]
 gi|324973690|gb|ADY52674.1| SSU ribosomal protein S4P [Pedobacter saltans DSM 12145]
          Length = 202

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+  E ++G  K  +  ++Y PG HG  +R+ K S + +QL  KQK+K
Sbjct: 1   MARYTGPKSKIARKFREPIFGPDK-ALERKNYPPGQHGPSKRRGKQSEYSIQLTEKQKVK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+F ++FK+A    G    NL+  LE+RLD +VYR     T  AARQ V+HR
Sbjct: 60  YTYGVL-EKQFSNLFKKASAKGGIAGTNLLQLLEARLDNVVYRLGIATTRSAARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LVNG  VNI S+  + GDVIEV++KSK L ++  +      +   ++  +  N+   F
Sbjct: 119 HILVNGELVNIPSFSVRPGDVIEVREKSKSLEAITNSVAGRTINKYSWLEWDSKNLTGKF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ P        P  ++ NL+VE YS+
Sbjct: 179 IQFPDR---ESIPENIKENLIVELYSK 202


>gi|227510162|ref|ZP_03940211.1| 30S ribosomal protein S4 [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190367|gb|EEI70434.1| 30S ribosomal protein S4 [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 231

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G +L G  K  ++ R Y PG HGQ R+ K S +GLQL+ KQK++ 
Sbjct: 29  MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRQKLSEYGLQLKEKQKLRY 87

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + R      N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 88  MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLERRLDNIVYRLGLATTRRQARQLVNHG 146

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G V+ V++KSK L  V +A + A    P+Y+S + D +  + 
Sbjct: 147 HITVDGKRVDIPSYEVKPGQVVSVREKSKDLQVVKDAVE-AVVGRPQYVSFDADKLEGSL 205

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +  +L+VE+Y++
Sbjct: 206 VRLPQREE---LDADIDESLIVEYYNK 229


>gi|187734944|ref|YP_001877056.1| ribosomal protein S4 [Akkermansia muciniphila ATCC BAA-835]
 gi|226697794|sp|B2UNG3|RS4_AKKM8 RecName: Full=30S ribosomal protein S4
 gi|187424996|gb|ACD04275.1| ribosomal protein S4 [Akkermansia muciniphila ATCC BAA-835]
          Length = 203

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 7/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           M++    + K+ RR G  L+G  K  +  R + PG HG R  + K S +G+ L  KQK++
Sbjct: 1   MARYTGPRDKVSRRFGVALFGSTK-ALEKRPFPPGQHGMRAGRKKKSDYGVMLAEKQKLR 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E +FR  + EA R RG T   L+  LE RLD +VYR  F  T   ARQ V+H 
Sbjct: 60  FQYGVL-EGQFRKYYAEAARRRGITGDILLQLLELRLDNVVYRLGFSNTRAGARQLVSHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVAT 178
           H+ VNG+  NI SY C+ GDVI V  K+     V     L +   VP+++  + D +   
Sbjct: 119 HITVNGKKTNIASYSCRPGDVIAVGGKASSQQLVTRFLDLTQATVVPDWLECDRDKLTGK 178

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R+PS  +  P    +   L+VEFYSR
Sbjct: 179 IARVPSKEEIAPI---VNEQLIVEFYSR 203


>gi|119478108|ref|ZP_01618187.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2143]
 gi|119448814|gb|EAW30057.1| ribosomal protein S4 [marine gamma proteobacterium HTCC2143]
          Length = 206

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +    P++++      PG+HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPTCKLSRREGTDLFLKSGVRPLDSKCKAEAPPGVHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G T  NL+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
            H+ +L+N + VNI SY+ K GD + V++K+K    V +A +L A+R   E+I VN  NM
Sbjct: 119 AHKSILINDKVVNIASYQVKAGDKVSVREKAKSQLRVKQAIELAAQRGDAEWIEVNVSNM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+   P           +  +L+VE YS+
Sbjct: 179 EGTYKAKPDRAD---LSSEINESLIVELYSK 206


>gi|224373704|ref|YP_002608076.1| 30S ribosomal protein S4 [Nautilia profundicola AmH]
 gi|254764602|sp|B9L6T8|RS4_NAUPA RecName: Full=30S ribosomal protein S4
 gi|223590010|gb|ACM93746.1| ribosomal protein S4 [Nautilia profundicola AmH]
          Length = 208

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR+G +L  +       KS ++ R Y PG HGQ R++K S +GLQLR 
Sbjct: 1   MARYTGPVEKIERRLGVSLELKGERRLAGKSALDKRPYAPGQHGQ-RRTKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K YYG + EK+FR  F+EA+R  G+T  NLI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKIKFYYGVL-EKQFRKFFREANRQEGNTGENLIKLLERRLDNVVYRMGFASTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V H H+LVNG+ VNI SY  KEGD IE+++KSK    +  A +L+++  +  ++ V+ +
Sbjct: 119 LVTHGHILVNGKKVNIPSYLVKEGDRIEIREKSKNNVQIQRALELSQQTGIAPWVDVDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +V  F R+P   +     + ++  LVVE YS+
Sbjct: 179 KLVGVFQRVPEREE---VNIPVEERLVVELYSK 208


>gi|300857220|ref|YP_003782204.1| 30S ribosomal protein S4 [Clostridium ljungdahlii DSM 13528]
 gi|300437335|gb|ADK17102.1| 30S ribosomal protein S4 [Clostridium ljungdahlii DSM 13528]
          Length = 206

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR G  L+ +       K   + R Y PG HGQRRK K S +GLQLR 
Sbjct: 1   MARYTGSVCRLCRREGLKLFLKGDRCYTDKCAFSRRGYAPGQHGQRRK-KVSNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR  ++ ADR +G T  NL+  LE+RLD ++YR  +  +   ARQ
Sbjct: 60  KQKAKRIYG-LLEGQFRKYYETADRKKGITGENLLVLLETRLDNVIYRLGYGQSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNGR V+I S++    D I V  KSK        ++   + +P ++  N +N
Sbjct: 119 LVTHGHFLVNGRKVDIPSFKVSVNDNITVSDKSKSSEKFKTFAENP-KTLPSWLEGNVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A  +R P+  +D+  PV     L+VE YS+
Sbjct: 178 FQAKVLRQPTR-EDIDVPV--NETLIVELYSK 206


>gi|328953131|ref|YP_004370465.1| ribosomal protein S4 [Desulfobacca acetoxidans DSM 11109]
 gi|328453455|gb|AEB09284.1| ribosomal protein S4 [Desulfobacca acetoxidans DSM 11109]
          Length = 208

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR    L+ +       K      SY PG HGQ R +K S FG+QLR 
Sbjct: 1   MARYRESVCRLCRRERMKLFLKGDRCYTDKCAFERHSYPPGQHGQGR-AKFSDFGIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+FRS F  ADR +G T  NL++ LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVRRMYG-LLEKQFRSYFAAADRQKGITGANLLTLLERRLDNVVYRLGFANSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173
            V H H LVNG+ +NI SY    GD IE+K+KS+++  + EA   +A R +P+++ V+ +
Sbjct: 119 LVRHNHFLVNGKKINIPSYLVNVGDTIELKEKSRKILQIAEALGAVARRGIPQWLEVDTE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N       +PS  +DV  P  +Q +L+VE YS+
Sbjct: 179 NFRGIIRLMPSR-EDVTMP--IQEHLIVELYSK 208


>gi|302876506|ref|YP_003845139.1| 30S ribosomal protein S4 [Clostridium cellulovorans 743B]
 gi|307687178|ref|ZP_07629624.1| 30S ribosomal protein S4 [Clostridium cellulovorans 743B]
 gi|302579363|gb|ADL53375.1| ribosomal protein S4 [Clostridium cellulovorans 743B]
          Length = 206

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR GE L  +       K   + R Y PG HGQ +K   +Y G+QLR 
Sbjct: 1   MARYTGPVCRLCRREGEKLNLKGDRCFTDKCAFDRRGYAPGQHGQSKKKLSNY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR  + +AD+ RG T  NL+  LE RLD ++YR  +  +   ARQ
Sbjct: 60  KQKAKRIYGVL-ENQFRRTYDKADKMRGITGENLVKLLEMRLDNVIYRLGYGNSRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY  K GDVI V++KS+   +    ++   R +P ++S +   
Sbjct: 119 LVTHGHFLVNGKKVDIPSYVVKAGDVITVREKSRATETFKTFAENP-RVLPAWLSGDIAT 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  PS  +D+  P+     L+VE YS+
Sbjct: 178 FEGKVVTAPSR-EDIDVPL--NETLIVELYSK 206


>gi|15604213|ref|NP_220728.1| 30S ribosomal protein S4 [Rickettsia prowazekii str. Madrid E]
 gi|6226104|sp|Q9ZDI3|RS4_RICPR RecName: Full=30S ribosomal protein S4
 gi|3860905|emb|CAA14805.1| 30S RIBOSOMAL PROTEIN S4 (rpsD) [Rickettsia prowazekii]
 gi|292571953|gb|ADE29868.1| 30S ribosomal protein S4 [Rickettsia prowazekii Rp22]
          Length = 205

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 97/206 (47%), Positives = 137/206 (66%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG ++EK+FR+IF  A R +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H
Sbjct: 61  YYGRVTEKQFRNIFALAQRMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+  +I S R KEGD+IE+K+  +Q+  + E+     +  P Y+S +  ++   ++
Sbjct: 121 IKLNGKKADIASIRLKEGDIIEIKESIQQIPLIQESISKQGQTTPGYLSFDIPSLTGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYP   + +LV+E YSR
Sbjct: 181 RVPA-LSDVPYPFEAEVHLVIELYSR 205


>gi|301021164|ref|ZP_07185202.1| ribosomal protein S4 [Escherichia coli MS 196-1]
 gi|312972443|ref|ZP_07786617.1| ribosomal protein S4 [Escherichia coli 1827-70]
 gi|30043665|gb|AAP19385.1| 30S ribosomal subunit protein S4 [Shigella flexneri 2a str. 2457T]
 gi|299881640|gb|EFI89851.1| ribosomal protein S4 [Escherichia coli MS 196-1]
 gi|310334820|gb|EFQ01025.1| ribosomal protein S4 [Escherichia coli 1827-70]
 gi|315617098|gb|EFU97708.1| ribosomal protein S4 [Escherichia coli 3431]
 gi|320187017|gb|EFW61729.1| SSU ribosomal protein S4p (S9e) [Shigella flexneri CDC 796-83]
 gi|320191670|gb|EFW66320.1| SSU ribosomal protein S4p (S9e) [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195388|gb|EFW70015.1| SSU ribosomal protein S4p (S9e) [Escherichia coli WV_060327]
 gi|320199483|gb|EFW74073.1| SSU ribosomal protein S4p (S9e) [Escherichia coli EC4100B]
 gi|323154134|gb|EFZ40337.1| ribosomal protein S4 [Escherichia coli EPECa14]
 gi|323179168|gb|EFZ64742.1| ribosomal protein S4 [Escherichia coli 1180]
 gi|323182774|gb|EFZ68175.1| ribosomal protein S4 [Escherichia coli 1357]
 gi|325498865|gb|EGC96724.1| ribosomal protein S4 [Escherichia fergusonii ECD227]
 gi|326342544|gb|EGD66318.1| SSU ribosomal protein S4p (S9e) [Escherichia coli O157:H7 str.
           1044]
 gi|326344531|gb|EGD68280.1| SSU ribosomal protein S4p (S9e) [Escherichia coli O157:H7 str.
           1125]
 gi|330909340|gb|EGH37854.1| SSU ribosomal protein S4p (S9e) [Escherichia coli AA86]
 gi|332085445|gb|EGI90611.1| ribosomal protein S4 [Shigella boydii 5216-82]
          Length = 202

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 124/207 (59%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M  TF
Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P           +  +L+VE YS+
Sbjct: 179 KRKPERSD---LSADINEHLIVELYSK 202


>gi|329117696|ref|ZP_08246413.1| ribosomal protein S4 [Streptococcus parauberis NCFD 2020]
 gi|326908101|gb|EGE55015.1| ribosomal protein S4 [Streptococcus parauberis NCFD 2020]
          Length = 203

 Score =  207 bits (527), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQAIKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDTEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|262197163|ref|YP_003268372.1| ribosomal protein S4 [Haliangium ochraceum DSM 14365]
 gi|262080510|gb|ACY16479.1| ribosomal protein S4 [Haliangium ochraceum DSM 14365]
          Length = 209

 Score =  207 bits (527), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 116/213 (54%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K   + RSY PG HGQ R+ K S +G QLR 
Sbjct: 1   MARYTGPVCRLCRREEMKLFLKGERCYTEKCGYDRRSYPPGQHGQSRRRKRSDYGEQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG I+E++FR  +  A R +G T  NLI  LE RLD +VYR  F      ARQ
Sbjct: 61  KQKVKRIYG-IAERQFRGYYHRASRMKGVTGENLIQLLERRLDNVVYRMGFACDHAEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H L++GR VNI SY  + G  ++VK+KS+ +  ++E+    E R VP +I +  D
Sbjct: 120 LVLHGHFLIDGRRVNIPSYLIRSGQTVQVKEKSRTVTRIVESLGAVERRGVPVWIDLEKD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +   +PS        + ++  L+VE YS+
Sbjct: 180 AFKGSVKALPSRSD---VSLDIREQLIVELYSK 209


>gi|228478099|ref|ZP_04062710.1| ribosomal protein S4 [Streptococcus salivarius SK126]
 gi|312864106|ref|ZP_07724341.1| ribosomal protein S4 [Streptococcus vestibularis F0396]
 gi|322374008|ref|ZP_08048542.1| ribosomal protein S4 [Streptococcus sp. C150]
 gi|322515823|ref|ZP_08068767.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124]
 gi|228250279|gb|EEK09532.1| ribosomal protein S4 [Streptococcus salivarius SK126]
 gi|311100338|gb|EFQ58546.1| ribosomal protein S4 [Streptococcus vestibularis F0396]
 gi|321276974|gb|EFX54045.1| ribosomal protein S4 [Streptococcus sp. C150]
 gi|322125709|gb|EFX97031.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124]
          Length = 203

 Score =  207 bits (527), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGFSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVE-ATIGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|239618238|ref|YP_002941560.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1]
 gi|259495284|sp|C5CGH5|RS4_KOSOT RecName: Full=30S ribosomal protein S4
 gi|239507069|gb|ACR80556.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1]
          Length = 208

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +      PK  V  R + PG HG   +    Y G+QLR+
Sbjct: 1   MARYTGPVCKLCRREGFKLYLKGERCFTPKCAVVKRPFAPGQHGSATRKLTQY-GMQLRS 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ +K+ YG + EK+FR  F+ A R   +T   LI  LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQALKRMYGVL-EKQFRRYFEIASRKSEETGTALIKVLESRLDNVVYRMGFASSRKQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V+H HVLVNGR VN  SY  + GD+IE+K+KSK    V EA + +  R  P ++ ++ D
Sbjct: 119 LVSHGHVLVNGRKVNKASYSVRPGDIIEIKEKSKAKVPVKEAIEASRNRTTPPWLEIDFD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TFVR P   ++V  PV +Q   ++E YS+
Sbjct: 179 AARGTFVRFPER-EEVDIPVDLQS--IIELYSK 208


>gi|293400755|ref|ZP_06644900.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305781|gb|EFE47025.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 200

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 124/206 (60%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+ +    K  RR+G ++       +  R+Y PG HG  ++ K + +GLQLR KQK++ 
Sbjct: 1   MSRVKGPVWKTSRRLGFSI-LETGEELQKRAYAPGQHGPTKRVKLTNYGLQLREKQKIRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F ++F +A + +G T  N ++ LESRLD +VYR  F  T  AARQ VNH H
Sbjct: 60  MYG-LNERQFHNLFVKASKMKGVTGENFLNLLESRLDNLVYRLGFARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I S+  K G  IEVK+KSK LA++ EA +     V  ++ V+ D    T++
Sbjct: 119 ILVNGKKVDIPSFIVKPGTTIEVKEKSKNLAAINEALEACLNTV-AFVDVDKDAKKGTYL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   LVVEFY+R
Sbjct: 178 RLPERSE---LNQEVNELLVVEFYNR 200


>gi|89891131|ref|ZP_01202639.1| 30S ribosomal protein S4 [Flavobacteria bacterium BBFL7]
 gi|89516775|gb|EAS19434.1| 30S ribosomal protein S4 [Flavobacteria bacterium BBFL7]
          Length = 201

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 86/207 (41%), Positives = 126/207 (60%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI RR  E ++G  K  +  ++Y PG+HG  RR+ K S + +QL+ KQK K
Sbjct: 1   MARYRGPKAKIARRFREPIFGPSK-ALEKKNYPPGMHGNARRRGKESEYAVQLKEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+FR +F++A RS G T   L+   ESRLD +VYR     T   ARQ V+HR
Sbjct: 60  YTYGVL-EKQFRLMFEKAVRSTGITGEVLLQLCESRLDNVVYRMGIAKTRRGARQLVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY+ K GDV+ V++KSK L+++ ++    E  V ++I+ N  +M  TF
Sbjct: 119 HMTVNGELVNIPSYQLKPGDVVAVREKSKSLSAIDQSLSSNEH-VYDFITFNKASMSGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P  L+    P  ++  L+VE YS+
Sbjct: 178 VSVPERLQ---IPENIKEQLIVELYSK 201


>gi|124003687|ref|ZP_01688535.1| ribosomal protein S4 [Microscilla marina ATCC 23134]
 gi|123990742|gb|EAY30209.1| ribosomal protein S4 [Microscilla marina ATCC 23134]
          Length = 200

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE + G  K  +  ++Y PG HG+ R+ K S + +QL+AKQK+K 
Sbjct: 1   MARYRGPKSKISRKFGEPIMGPSK-ALQKKAYPPGQHGKGRRKKQSEYAIQLQAKQKVKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++F ++F +A   +G T  NL+ FLE+RLD  VYR    PT  AARQ V H+H
Sbjct: 60  IYGVL-ERQFANLFDKAAGKQGITGENLLKFLEARLDNTVYRLGIAPTRRAARQLVIHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG   N+ SY  K GD++ V++KSK L  V E+     +    ++  +   M   F+
Sbjct: 119 ITVNGEVANVPSYSLKPGDIVGVREKSKSLEVVTESLMSNSKRF-NWLEWDSTMMAGKFL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P   +    P  +Q  L+VE YS+
Sbjct: 178 SYPERDQ---IPEKVQEQLIVELYSK 200


>gi|157803917|ref|YP_001492466.1| 30S ribosomal protein S4 [Rickettsia canadensis str. McKiel]
 gi|172045657|sp|A8EZ98|RS4_RICCK RecName: Full=30S ribosomal protein S4
 gi|157785180|gb|ABV73681.1| 30S ribosomal protein S4 [Rickettsia canadensis str. McKiel]
          Length = 205

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 97/206 (47%), Positives = 138/206 (66%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   N R+Y PG HGQ    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDSKDAFNIRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+FR+IF+ A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H
Sbjct: 61  HYGRVTEKQFRNIFELAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+  +I S R KEGDV+EVK+  KQ+A + E+     +  P Y+S +  ++   ++
Sbjct: 121 IKLNGKKADIASIRLKEGDVVEVKESIKQIALIQESILKQGQTTPNYLSFDVPSLTGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ L DVPYP   + +LV+E YSR
Sbjct: 181 RVPN-LSDVPYPFEAEVHLVIELYSR 205


>gi|78484663|ref|YP_390588.1| ribosomal protein S4 [Thiomicrospira crunogena XCL-2]
 gi|90101733|sp|Q31IV9|RS4_THICR RecName: Full=30S ribosomal protein S4
 gi|78362949|gb|ABB40914.1| SSU ribosomal protein S4P [Thiomicrospira crunogena XCL-2]
          Length = 206

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     + ++      PG HG  RK    Y GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRSIESKCKIDQLPGQHGAGRKRVTEY-GLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EKKFR  +KEADR +G T  NL+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKKFRLYYKEADRRKGSTGVNLLQLLESRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+ + VNG+SVNI SY    GDVI +++KS+  + +  A +L A+     ++ V+    
Sbjct: 119 SHKSIQVNGQSVNIPSYEVSAGDVISIREKSRNQSRIAAALELSAQAGNVGWVEVDSSKF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P           +  NL+VE YS+
Sbjct: 179 EGVFKTVPDRSD---LSADISENLIVELYSK 206


>gi|241895757|ref|ZP_04783053.1| ribosomal protein S4 [Weissella paramesenteroides ATCC 33313]
 gi|241870800|gb|EER74551.1| ribosomal protein S4 [Weissella paramesenteroides ATCC 33313]
          Length = 203

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K+++ RR+G +L G  K  +  R+Y PG HG  R+SKPS +G+QL  KQK++ 
Sbjct: 1   MSRYTGPKYRLSRRLGVSLSGTGKE-LARRNYAPGDHGAGRRSKPSDYGIQLAEKQKVRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F +A + R  T   N +S LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  TYG-MTERQFHNLFLKAGKIRKGTHGDNFMSLLERRLDNIVYRLGLASTRQQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY    G  I V++KS++   +  A +     +P ++  + D +  T 
Sbjct: 119 HILVDGKRVDIPSYEVSVGQEISVREKSQKNVYIQAAVEAQAGTLP-FVEFDKDTLKGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +           L+VE+Y+R
Sbjct: 178 VREPERAE---LDHEYNEALIVEYYNR 201


>gi|152998247|ref|YP_001343082.1| 30S ribosomal protein S4 [Marinomonas sp. MWYL1]
 gi|189045385|sp|A6W368|RS4_MARMS RecName: Full=30S ribosomal protein S4
 gi|150839171|gb|ABR73147.1| ribosomal protein S4 [Marinomonas sp. MWYL1]
          Length = 206

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS-PVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L  +  S  + ++      PG+HG RR     Y GLQLR KQ
Sbjct: 1   MARYIGPTCKLSRREGTDLQLKSGSRALESKCKVETVPGVHGARRGRLSEY-GLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I EK+FR+ +K A R +G T  NL+  LESRLD +VYRA F  T   ARQ V
Sbjct: 60  KVRRMYG-ILEKQFRNYYKSAARLKGATGENLLQLLESRLDNVVYRAGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
            H+ +LVNG +VNI SY+ K GDV+ +++K+K+   V  A +L++   P  +I V+   +
Sbjct: 119 GHKGILVNGATVNIPSYQVKAGDVVSIREKAKKQLRVQSALELSKGRAPIHWIEVDSTKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            AT+  +P           +  NL+VE YS+
Sbjct: 179 EATYKALPERAD---LSAEINENLIVELYSK 206


>gi|291613261|ref|YP_003523418.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1]
 gi|291583373|gb|ADE11031.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1]
          Length = 209

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K +  RR GE L+ +       K  V  R+Y PG HGQ++  + S +G QLR 
Sbjct: 1   MARNLDAKCRQCRREGEKLFLKAEKCFTDKCSVERRAYAPGQHGQKKNQRQSEYGGQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR  +K A++SRG T  +L+  LESRLD + YR  F  +   ARQ
Sbjct: 61  KQKLRRIYGMM-EGQFRLTYKRAEQSRGITGESLLQMLESRLDNVSYRMGFGASRSEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  +LVNG+ VNI SY+ + GDV+EV +KS+    V  A Q AE R  PE++ V+  
Sbjct: 120 VVRHNSILVNGKRVNIPSYQVRPGDVVEVAEKSRNQLRVKAALQAAEQRGFPEWLEVDAK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF  +P   +    P  +  +LVVE YS+
Sbjct: 180 AFKGTFKAVPQRSE---LPATINEHLVVELYSK 209


>gi|189501185|ref|YP_001960655.1| 30S ribosomal protein S4 [Chlorobium phaeobacteroides BS1]
 gi|226697822|sp|B3EP35|RS4_CHLPB RecName: Full=30S ribosomal protein S4
 gi|189496626|gb|ACE05174.1| ribosomal protein S4 [Chlorobium phaeobacteroides BS1]
          Length = 203

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 120/207 (57%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R Y PG HGQ R+ K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGVALSPKAEKYLEKRPYAPGEHGQSRRGKVSEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+ +K+A   RG T  NL+  LE R D +V+RA F P+   ARQ V H H
Sbjct: 61  LYGVL-EKQFRNYYKKAVSQRGITGDNLVKLLERRFDNVVFRAGFSPSRAGARQLVTHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +L+NG+ V+I SY  K GD +E +QKS+ L +V ++   A +  +P +I V+  +  A F
Sbjct: 120 LLINGKKVDIPSYLLKPGDAMEFRQKSQNLDAVADSMNRAPDSRIPSWIQVDKAHKKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P   +           LVVE YS+
Sbjct: 180 LAVPEREE---VQEPFNEQLVVELYSK 203


>gi|33594506|ref|NP_882150.1| 30S ribosomal protein S4 [Bordetella pertussis Tohama I]
 gi|33594777|ref|NP_882420.1| 30S ribosomal protein S4 [Bordetella parapertussis 12822]
 gi|33599049|ref|NP_886609.1| 30S ribosomal protein S4 [Bordetella bronchiseptica RB50]
 gi|61236218|sp|P0A4C5|RS4_BORPE RecName: Full=30S ribosomal protein S4
 gi|61236221|sp|P0A4C6|RS4_BORBR RecName: Full=30S ribosomal protein S4
 gi|61236225|sp|P0A4C7|RS4_BORPA RecName: Full=30S ribosomal protein S4
 gi|33564582|emb|CAE43898.1| 30S ribosomal protein S4 [Bordetella pertussis Tohama I]
 gi|33564853|emb|CAE39797.1| 30S ribosomal protein S4 [Bordetella parapertussis]
 gi|33575095|emb|CAE30558.1| 30S ribosomal protein S4 [Bordetella bronchiseptica RB50]
          Length = 207

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++++      PG HG+   ++ S +GLQLR KQ
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KLKRMYGVL-EKQFRKYFVEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           +HR + +NG + +I S   K GDVI +++K+K+   + E+  LA    +P+++ V+   M
Sbjct: 120 SHRAIELNGHTADIASMLVKAGDVISIREKAKKQGRIRESLDLAASIGLPQWVEVDASKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P           +  ++VVE YSR
Sbjct: 180 TGTFKSAPDRAD---VARDVNESMVVELYSR 207


>gi|209560256|ref|YP_002286728.1| 30S ribosomal protein S4 [Streptococcus pyogenes NZ131]
 gi|226695085|sp|B5XJ99|RS4_STRPZ RecName: Full=30S ribosomal protein S4
 gi|209541457|gb|ACI62033.1| SSU ribosomal protein S4p (S9e) [Streptococcus pyogenes NZ131]
          Length = 203

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++  +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLVVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVDPGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLKGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|152112239|sp|Q04E66|RS4_OENOB RecName: Full=30S ribosomal protein S4
          Length = 204

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    K ++ RR+G +L G  K  +  R Y PG HG   R+ K S +  QLR KQK++
Sbjct: 1   MSRYTGPKWRLSRRLGISLSGSGKE-LARRPYAPGDHGNTGRRPKLSEYATQLREKQKLR 59

Query: 60  KYYGDISEKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
             YG +SE++F ++F +A +  +G    N    LE+RLD++V+R     T   ARQ VNH
Sbjct: 60  FTYG-LSERQFHNLFLKAGKIRKGLHGTNFFILLETRLDSVVFRLGLASTRPQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+LV+G+ V I SY  K G +I V+++SK++  +L + + +  + P ++  + D +   
Sbjct: 119 GHILVDGKRVTIPSYEVKPGQIISVRERSKKIVPILNSVEASLNNTP-FVEFDADKLEGK 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R P   +       +  +L+VE+Y+R
Sbjct: 178 LTRYPEREE---LGADINESLIVEYYNR 202


>gi|253575746|ref|ZP_04853081.1| 30S ribosomal protein S4 [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844789|gb|EES72802.1| 30S ribosomal protein S4 [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 199

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR+G +L G  K     R + PG HG  ++ K S +G QL  KQK++ 
Sbjct: 1   MARYTGPKFKLSRRLGISLSGTGKDL--KRPFPPGQHGPNQRRKVSNYGAQLLEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A    G      +  LESRLD +VYR  F  +   ARQ V+H H
Sbjct: 59  MYG-LGEKQFRTLFEKAQHMPGIAGETFMILLESRLDNLVYRLGFANSRAGARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SYR   GDVI ++++S+ L+SV EA +     VP Y+  N   +   ++
Sbjct: 118 VTVNGKKVDIASYRVNVGDVIGLRERSRGLSSVKEALE-NRTHVPAYLEFNDTTLEGKYI 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFY+R
Sbjct: 177 RLPERSE---LSQDIDEKQIVEFYNR 199


>gi|254421878|ref|ZP_05035596.1| ribosomal protein S4 [Synechococcus sp. PCC 7335]
 gi|196189367|gb|EDX84331.1| ribosomal protein S4 [Synechococcus sp. PCC 7335]
          Length = 202

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+G+      KS    ++Y PG HGQ RK K  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVVRRLGDLPGLTRKSA--RKAYPPGQHGQARKKKSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++     K+A R+ G T   ++  LE RLD  ++R    PTI AARQ VNH H
Sbjct: 58  NYG-VTERQLLRYVKKARRAGGSTGQVILQQLEMRLDNTIFRLGMGPTIPAARQVVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNGR V+I SY+C+ GDVI V+ K      V    +     ++P ++  +   + A  
Sbjct: 117 ITVNGRVVSIPSYQCRPGDVIGVRGKEASKKLVTANLEFPGLANIPTHLDFDKGKLEAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 TGVIER---EWIALNINELLVVEYYSR 200


>gi|315221587|ref|ZP_07863507.1| ribosomal protein S4 [Streptococcus anginosus F0211]
 gi|315189421|gb|EFU23116.1| ribosomal protein S4 [Streptococcus anginosus F0211]
          Length = 227

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 25  MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 83

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G     N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 84  TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 142

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 143 HILVDGKRVDIPSYRVSVGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 201

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVE+Y++
Sbjct: 202 TRLPERDE---INPEINEALVVEYYNK 225


>gi|310765574|gb|ADP10524.1| 30S ribosomal protein S4 [Erwinia sp. Ejp617]
          Length = 202

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 124/207 (59%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKS 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           ++VNGR V+I SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M   F
Sbjct: 119 IMVNGRVVSIASYQVTPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDATKMEGVF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP           +  +L+VE YS+
Sbjct: 179 KRIPERTD---LSADINEHLIVELYSK 202


>gi|114319643|ref|YP_741326.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312435|sp|Q0ABF1|RS4_ALHEH RecName: Full=30S ribosomal protein S4
 gi|114226037|gb|ABI55836.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 206

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +    P++++      PG   Q R+++ S +GLQLR KQ
Sbjct: 1   MARYIGPTCKLARREGTDLFLKSGVRPLDSKCKLDQPPGPKLQ-RRTRMSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-ERQFRNYYKEAARQKGATGTVLLQLLESRLDNVVYRMGFATTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175
           +HR V VNGR VN+ S +   GD++ +K+K+++   V  A ++A+++  P ++ V+    
Sbjct: 119 SHRGVQVNGRVVNVPSMQVSPGDLVGLKEKAQKQLRVQAALEMAQQNGWPAWVEVDPKKF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T+   P           +  +L+VE YS+
Sbjct: 179 EGTYKARPDRAD---LSAEINESLIVELYSK 206


>gi|308069706|ref|YP_003871311.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681]
 gi|305858985|gb|ADM70773.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681]
          Length = 199

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR+G +L G  K     R + PG HG  ++ K S +G+QL+ KQK++ 
Sbjct: 1   MARYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGANQRRKISNYGMQLQEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F +A    G    N +  LESRLD +V+R  F  +   ARQ V H H
Sbjct: 59  MYG-LGEKQFRTLFNKAQHMHGIAGENFMFLLESRLDNLVFRLGFANSRAGARQLVAHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SY+   GDVI ++++S+ L+S+ EA +     +  Y+  N   +   F+
Sbjct: 118 VTVNGKKVDIASYQVSPGDVIGLRERSRSLSSIKEALE-NRNHLVAYLEYNDAALEGKFI 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFY+R
Sbjct: 177 RLPERGE---LSQDIDEKQIVEFYNR 199


>gi|148381393|ref|YP_001255934.1| ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502]
 gi|153933367|ref|YP_001385768.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397]
 gi|153935510|ref|YP_001389175.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall]
 gi|153940320|ref|YP_001392806.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland]
 gi|168178860|ref|ZP_02613524.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916]
 gi|168181892|ref|ZP_02616556.1| 30S ribosomal protein S4 [Clostridium botulinum Bf]
 gi|170755638|ref|YP_001783093.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra]
 gi|226950905|ref|YP_002805996.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto]
 gi|237796914|ref|YP_002864466.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657]
 gi|171769230|sp|A7FZ45|RS4A_CLOB1 RecName: Full=30S ribosomal protein S4 A
 gi|171769265|sp|A7GJ46|RS4A_CLOBL RecName: Full=30S ribosomal protein S4 A
 gi|172047868|sp|A5I7H8|RS4A_CLOBH RecName: Full=30S ribosomal protein S4 A
 gi|148290877|emb|CAL85013.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502]
 gi|152929411|gb|ABS34911.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397]
 gi|152931424|gb|ABS36923.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall]
 gi|152936216|gb|ABS41714.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland]
 gi|169120850|gb|ACA44686.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra]
 gi|182669924|gb|EDT81900.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916]
 gi|182674921|gb|EDT86882.1| 30S ribosomal protein S4 [Clostridium botulinum Bf]
 gi|226841883|gb|ACO84549.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto]
 gi|229261759|gb|ACQ52792.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657]
 gi|295320786|gb|ADG01164.1| 30S ribosomal protein S4 [Clostridium botulinum F str. 230613]
 gi|322807778|emb|CBZ05353.1| SSU ribosomal protein S4p (S9e) [Clostridium botulinum H04402 065]
          Length = 206

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 115/212 (54%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     R Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MARYTGATCRLCRREGLKLFLKGDRCYTDKCAFARRGYAPGQHGQSRK-KVSNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG I E++FR  ++EADR RG T  NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKAKRIYG-ILERQFRGYYEEADRRRGITGENLLRLLEMRLDNVVYRLGYGNSRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY+    DVI V  KSK        ++   + +P ++S N + 
Sbjct: 119 LVTHGHFLVNGKKVDIPSYQVSANDVITVCDKSKATEKFKTFAENP-KTLPAWLSGNVEG 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 R P+  +D+  PV     L+VE YS+
Sbjct: 178 FEGKVERQPAR-EDIDVPV--NETLIVELYSK 206


>gi|322412877|gb|EFY03785.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
 gi|323128282|gb|ADX25579.1| 30S ribosomal protein S4 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 203

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEAGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|332185474|ref|ZP_08387222.1| ribosomal protein S4 [Sphingomonas sp. S17]
 gi|332014452|gb|EGI56509.1| ribosomal protein S4 [Sphingomonas sp. S17]
          Length = 190

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 121/192 (63%), Positives = 149/192 (77%), Gaps = 2/192 (1%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +GEN+WGRPKSPVN R YGPG HGQRRK K S FGLQLRAKQK+K YYGD++EK+F++ +
Sbjct: 1   MGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDFGLQLRAKQKLKGYYGDVTEKQFKACY 60

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +EA R +GDTS NLI  LE RLD IVYRAKF PTIFAARQ V+H H+ VNG   N+ S R
Sbjct: 61  QEAARMKGDTSQNLIGLLEQRLDMIVYRAKFAPTIFAARQLVSHGHIRVNGVKCNVASRR 120

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           C  GD I +  K+ ++A VLEA QLAER+VP+Y++ + +  VA   R+P+ L +VPYPV 
Sbjct: 121 CFVGDEISLGSKAAEMALVLEAQQLAEREVPDYVTADGNTKVA-LTRVPT-LDEVPYPVK 178

Query: 195 MQPNLVVEFYSR 206
           M+PNLVVEFYSR
Sbjct: 179 MEPNLVVEFYSR 190


>gi|322391286|ref|ZP_08064757.1| 30S ribosomal protein S4 [Streptococcus peroris ATCC 700780]
 gi|321145890|gb|EFX41280.1| 30S ribosomal protein S4 [Streptococcus peroris ATCC 700780]
          Length = 203

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F EA + +G     N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVEATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + D +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDADKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VEFY++
Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201


>gi|325955022|ref|YP_004238682.1| ribosomal protein S4 [Weeksella virosa DSM 16922]
 gi|323437640|gb|ADX68104.1| ribosomal protein S4 [Weeksella virosa DSM 16922]
          Length = 200

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 123/207 (59%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+ G+ ++G  KS    + Y PG HG  +R+SK S + +QL  KQK K
Sbjct: 1   MARYTGPKTKIARKFGQTIFGDDKS-FEKKKYPPGQHGPNKRRSKKSEYAIQLAEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++F +++K+A+ S+G T   L+   ESRLD +VYR    PT  AARQ V+H+
Sbjct: 60  YTYG-ILERQFENMYKKANASKGITGEVLLQLCESRLDNVVYRLGIAPTRSAARQLVSHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY+ KEGDV+ V++KSK L ++ ++     R   E++  N +    TF
Sbjct: 119 HITVNGNIVNIPSYQLKEGDVVAVREKSKSLQTIKDSLHA--RREYEWLVWNDEQTSGTF 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + P     V  P  ++  L+VE YS+
Sbjct: 177 TKAPER---VQIPEDIKELLIVELYSK 200


>gi|238788888|ref|ZP_04632678.1| 30S ribosomal protein S4 [Yersinia frederiksenii ATCC 33641]
 gi|238792959|ref|ZP_04636589.1| 30S ribosomal protein S4 [Yersinia intermedia ATCC 29909]
 gi|238722915|gb|EEQ14565.1| 30S ribosomal protein S4 [Yersinia frederiksenii ATCC 33641]
 gi|238727813|gb|EEQ19337.1| 30S ribosomal protein S4 [Yersinia intermedia ATCC 29909]
          Length = 202

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGA-RKPRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V+H+ 
Sbjct: 60  IYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M   F
Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKMEGVF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP           +  +L+VE YS+
Sbjct: 179 KRIPERTD---LSADINEHLIVELYSK 202


>gi|242278683|ref|YP_002990812.1| ribosomal protein S4 [Desulfovibrio salexigens DSM 2638]
 gi|259495273|sp|C6C1B0|RS4_DESAD RecName: Full=30S ribosomal protein S4
 gi|242121577|gb|ACS79273.1| ribosomal protein S4 [Desulfovibrio salexigens DSM 2638]
          Length = 208

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K ++ RR GE L+ +       K     R Y PG+ G+ RK K S + +QLR 
Sbjct: 1   MARYTKAKCRLCRREGEKLFIKGDRCFTDKCSYERRPYAPGIAGRMRK-KMSDYAIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FRS FK AD  +G T  NL+  LE+RLD  VYR  F  +   ARQ
Sbjct: 60  KQKVRRMYGVL-EGQFRSYFKRADGMKGVTGANLLMLLETRLDNTVYRLGFANSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H     NGR VN+ S   K GDVIEV+++S+++  + EA + +A R  PE++  +  
Sbjct: 119 LVKHGIFTKNGRRVNVPSMHVKPGDVIEVREESRKIPVIAEAQEVIARRGCPEWLEADGA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N       +P+  +D+ +P  +   L+VE YS+
Sbjct: 179 NFKGEVKAMPTR-EDIQFP--INEQLIVELYSK 208


>gi|288942048|ref|YP_003444288.1| 30S ribosomal protein S4 [Allochromatium vinosum DSM 180]
 gi|288897420|gb|ADC63256.1| ribosomal protein S4 [Allochromatium vinosum DSM 180]
          Length = 206

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 121/210 (57%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQK 57
           M++      K+ RR G +L  + +   ++T+       GQ   R+ + S +G+QLR KQK
Sbjct: 1   MARYIGPTCKLARREGVDLSLKSRARSLDTKCKLEKQPGQTTDRRRRLSDYGVQLREKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +++ YG + E++FR+ +K+A +S+G T  NL+  LE RLD +VYR  F  T   ARQ V+
Sbjct: 61  VRRIYGVL-ERQFRNYYKKAAQSKGATGENLLQILERRLDNVVYRMGFGATRAEARQLVS 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176
           H+ +LVNGR VNI SY+    D +EV++ +K+   V  A  LAE+   P+++ V+   + 
Sbjct: 120 HKGILVNGRIVNIASYQVNADDHVEVREAAKKQVRVQNAMALAEQYGFPDWVEVDSKGLK 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             F RIP        P  +  +L+VE YS+
Sbjct: 180 GVFKRIPDRSD---LPADINESLIVELYSK 206


>gi|149195169|ref|ZP_01872260.1| 30S ribosomal protein S4 [Caminibacter mediatlanticus TB-2]
 gi|149134721|gb|EDM23206.1| 30S ribosomal protein S4 [Caminibacter mediatlanticus TB-2]
          Length = 208

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      +I+RR+G +L  +       KS ++ R Y PG HGQ R++K S +G QLR 
Sbjct: 1   MARYTGPVERIERRLGVSLELKGERRLAGKSALDRRPYAPGQHGQ-RRAKISEYGQQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K YYG + EK+FR  FKEA+R  G+T  NLI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKIKYYYGVL-EKQFRRFFKEANRQEGNTGENLIKLLERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ VNI SY  KEGD IE+++KSK    +  A +L A+  +  ++ V+ +
Sbjct: 119 LVTHGHILVNGKRVNIPSYIVKEGDRIEIREKSKNNPQIQRALELTAQTGIAPWVDVDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            MV  F R+P   +     + +   LVVE YS+
Sbjct: 179 KMVGVFQRVPEREE---VNIPVDERLVVELYSK 208


>gi|237653971|ref|YP_002890285.1| 30S ribosomal protein S4 [Thauera sp. MZ1T]
 gi|237625218|gb|ACR01908.1| ribosomal protein S4 [Thauera sp. MZ1T]
          Length = 209

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R+Y PG HGQR   + S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCSIERRAYAPGQHGQRSGQRLSGYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++FR ++ EADR RG T  NL+  LE RLD + YR  F  +   ARQ
Sbjct: 61  KQKIRRIYGVL-ERQFRKVYAEADRRRGQTGENLLQLLEGRLDAVAYRMGFGASRAEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  VLVNG+ VNI SY  + GDV+E+ ++++    V  A + AE R  PE++ V+  
Sbjct: 120 VVRHNGVLVNGKRVNIPSYVVRPGDVVELTERARGHLRVKAALEAAESRGFPEWLEVDAK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF   P   +    P  +   LVVE YSR
Sbjct: 180 AGKGTFKAYPVRSE---LPPTINEGLVVELYSR 209


>gi|150025382|ref|YP_001296208.1| 30S ribosomal protein S4 [Flavobacterium psychrophilum JIP02/86]
 gi|172048611|sp|A6GZ74|RS4_FLAPJ RecName: Full=30S ribosomal protein S4
 gi|149771923|emb|CAL43397.1| 30S ribosomal protein S4 [Flavobacterium psychrophilum JIP02/86]
          Length = 201

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++      +I R+ GE ++G  KS    R+Y PG HG  +++ K S F +QL  KQK K
Sbjct: 1   MARYTGPSTRIARKFGEAIFGDDKS-FEKRNYPPGQHGMAKKRGKKSEFAIQLMEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I EK+FR +FK+A  S+G T   L+   E+RLD +VYR    PT  AARQ V+HR
Sbjct: 60  YSYG-ILEKQFRGLFKKAAASKGVTGEILLQLCEARLDNVVYRMGIAPTRRAARQIVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV VNG  VN+ SY  K GD + V++KSK L ++  +   +   V E+I+ N   M  TF
Sbjct: 119 HVTVNGELVNVPSYHLKPGDKVAVREKSKSLEAIDRSLSNSSH-VYEWITWNTAQMEGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P+ L+    P  ++  L+VE Y++
Sbjct: 178 VSVPARLQ---IPENIKEQLIVELYNK 201


>gi|317050554|ref|YP_004111670.1| 30S ribosomal protein S4 [Desulfurispirillum indicum S5]
 gi|316945638|gb|ADU65114.1| ribosomal protein S4 [Desulfurispirillum indicum S5]
          Length = 208

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR  + L+ +       K     R+Y PG HGQ R+ KPS + +QLR 
Sbjct: 1   MARYTGPVCRMCRRENQKLYLKGLRCETSKCAFERRAYAPGSHGQ-RRGKPSDYAIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR  F +A R +G T  NL++ LE R D +VYR     +   +RQ
Sbjct: 60  KQKVRRTYG-LLETQFRRTFDKAVRMKGVTGSNLLTLLELRFDNVVYRLGLGVSRSQSRQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            + H H L+NG+  NI S + + GDVI +++KS  L  V  + +    R VP+++  + +
Sbjct: 119 LITHGHFLLNGKKANIPSIQLRAGDVISLREKSANLDVVRGSVEAGPSRTVPQWLEFDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +     ++P   +DV  PV    NL+VE YSR
Sbjct: 179 KLTGKVKQLPVR-EDVTEPVT--ENLIVELYSR 208


>gi|218961407|ref|YP_001741182.1| 30S ribosomal subunit protein S4 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730064|emb|CAO80976.1| 30S ribosomal subunit protein S4 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 205

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 123/209 (58%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K    K KI R+ GEN++G  K    ++ R Y  G HG+  + K S +GL L+ KQKM
Sbjct: 1   MAKYTGPKAKICRKFGENIYGNAKYDKILSKRKYPAGQHGRNLRRKLSDYGLHLKEKQKM 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y  + EK+F + FK+A ++ G T  NL+  LE RLD +VYR  F  T   ARQF+NH
Sbjct: 61  RHTYC-LMEKQFSNYFKKAAKAPGVTGDNLLQLLERRLDNVVYRMGFAVTRMQARQFINH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNMVA 177
            H LVNGR V+I SY  K GD+IEV+ KSK +  +LEA    E   P  ++SV+ +N   
Sbjct: 120 GHFLVNGRKVDIPSYLVKAGDIIEVRPKSKGMKPLLEAMDKTEVTSPYSWMSVDKENFRG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            F  IP+  +    PV     L+VEFYS+
Sbjct: 180 QFNSIPAVSE---IPVTCDLRLIVEFYSK 205


>gi|149279638|ref|ZP_01885767.1| 30S ribosomal protein S4 [Pedobacter sp. BAL39]
 gi|149229674|gb|EDM35064.1| 30S ribosomal protein S4 [Pedobacter sp. BAL39]
          Length = 202

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+  E ++G  K  ++ ++Y PG HG  +R+ K S + +QL  KQK+K
Sbjct: 1   MARYTGPKSKIARKFREPIFGPDK-VLDRKNYPPGQHGASKRRGKQSEYAVQLMEKQKVK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR++F +A   +G T  NL+  LE+RLD  VYR     T  AARQ V+H+
Sbjct: 60  YTYGVL-ERQFRNLFTKASSRQGITGDNLLQLLEARLDNTVYRLGIATTRSAARQLVSHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV VNG  VNI SY+ K GDVI V++KSK L ++  +      +   ++  N   +   F
Sbjct: 119 HVTVNGEVVNIPSYQLKAGDVIAVREKSKTLEAITNSVAGRVINKFNWLDWNASELTGKF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P+  +    P  ++ NL+VE YS+
Sbjct: 179 LSYPNRDE---IPENIKENLIVELYSK 202


>gi|119512953|ref|ZP_01632015.1| 30S ribosomal protein S4 [Nodularia spumigena CCY9414]
 gi|119462406|gb|EAW43381.1| 30S ribosomal protein S4 [Nodularia spumigena CCY9414]
          Length = 202

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+GE      K+    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGELPGLSRKTA--RRAYPPGQHGQNRKKRSEY-AVRLEEKQKIRM 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     ++A R  G T   L+  LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-LTEKQLLRYVRKARRVTGSTGQVLLQMLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+ V+I SY+C+ G+V+ ++ +      V    Q     ++P ++  +   +    
Sbjct: 117 VTVNGKRVDIASYQCRPGEVVAIRDREASRKLVEANLQYPGLANLPSHLEFDKAKLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200


>gi|152989997|ref|YP_001355719.1| 30S ribosomal protein S4 [Nitratiruptor sp. SB155-2]
 gi|172048726|sp|A6Q1K3|RS4_NITSB RecName: Full=30S ribosomal protein S4
 gi|151421858|dbj|BAF69362.1| 30S ribosomal protein S4 [Nitratiruptor sp. SB155-2]
          Length = 208

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 125/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR+G +L  +       KS +  R Y PG HGQRR     Y GLQLR 
Sbjct: 1   MARYRGPVEKIERRLGVSLALKGERRLAGKSALEKRPYPPGQHGQRRSKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ++EK+FR++FKEA+R  G+T  NLI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VAEKQFRNLFKEANRMEGNTGENLIKLLERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            VNH HVLV+G+ VNI S+R K G  IE+++KSK    +  + +L  +  +  ++ V+ +
Sbjct: 119 LVNHGHVLVDGKRVNIPSFRVKPGQKIEIREKSKNNPQIQRSLELTNQTGIVPWVDVDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F RIP   +     + ++  L+VE YS+
Sbjct: 179 KVFGIFTRIPEREE---IDIPVEERLIVELYSK 208


>gi|218885212|ref|YP_002434533.1| 30S ribosomal protein S4 [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226732177|sp|B8DNK8|RS4_DESVM RecName: Full=30S ribosomal protein S4
 gi|218756166|gb|ACL07065.1| ribosomal protein S4 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 208

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +K ++ RR G  L+ +       K   + R Y PG HG+ RK K S + +QLR 
Sbjct: 1   MAKYNDAKCRMCRREGTKLFLKGDRCYTDKCAYDRRPYAPGQHGRARK-KVSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++FR  F +AD ++G T  NL++ LE RLD ++YR  F  +   ARQ
Sbjct: 60  KQKVRRVYGVL-ERQFRGYFHKADMAKGVTGANLLAILERRLDNVIYRLGFANSRQQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NGR  NI S + + GD+IEV + S+++  + EA + +A R  P ++ V+  
Sbjct: 119 LVRHGIFTLNGRKANIPSMQVRVGDIIEVPEASRKIPVIAEAQEVIARRGCPSWLEVDGP 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   T   +P   +D+ +P  +  +L+VE YS+
Sbjct: 179 SFKGTVKALPQR-EDIQFP--INEHLIVELYSK 208


>gi|257054497|ref|YP_003132329.1| 30S ribosomal protein S4 [Saccharomonospora viridis DSM 43017]
 gi|256584369|gb|ACU95502.1| SSU ribosomal protein S4P [Saccharomonospora viridis DSM 43017]
          Length = 202

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +I RR+  +L G  K     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRISRRLKVDLVGNDK-AFERRPYPPGQHGRGRVKESEYL-LQLQEKQKARH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I E++FR  ++EA R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-ILERQFRRYYEEAARRPGKTGDNLLQLLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKS-KQLASVLEASQLAERDVPEYISVNHDNMVATF 179
            LVNG  VNI SYR  + D+I+V+ KS K L  V     L ER +P ++ V   N+    
Sbjct: 118 FLVNGEKVNIPSYRVSKFDIIDVRPKSLKTLPFVAAKESLGERPIPAWLQVVPSNLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IEVPVQEQLIVEFYSK 201


>gi|156743922|ref|YP_001434051.1| 30S ribosomal protein S4 [Roseiflexus castenholzii DSM 13941]
 gi|189045395|sp|A7NR37|RS4_ROSCS RecName: Full=30S ribosomal protein S4
 gi|156235250|gb|ABU60033.1| ribosomal protein S4 [Roseiflexus castenholzii DSM 13941]
          Length = 206

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           M++      KI RR+G  +  + +  +  R + PG HG   R+ + S +GLQL  KQK +
Sbjct: 1   MARYIGPVGKISRRLGIGITEKGQRILAKRPFPPGQHGPSARRRQVSDYGLQLLEKQKAR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR IF++A R  G+T   L+  LE RLD +VYR  F  T   ARQ V H 
Sbjct: 61  YIYGVL-ERQFRRIFEKAQRFPGETGAYLLILLERRLDNVVYRLGFATTRAQARQLVTHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMV 176
           H+ VNGR  NI SY  + G+ I V+ +S++        E+  LA+   P+++ +N  ++ 
Sbjct: 120 HITVNGRKTNIPSYTVRVGETIAVRPESRRRMYFKNLVESGALAKHKAPDWLRLNPADLS 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              V +P      P    +   L+VEFYSR
Sbjct: 180 GEVVAMPRREDAEP---GINEQLIVEFYSR 206


>gi|269792766|ref|YP_003317670.1| 30S ribosomal protein S4 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100401|gb|ACZ19388.1| ribosomal protein S4 [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 208

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS+      ++ R  G  L+ +       K  +  R+  PG HG  RK K S +G++LR 
Sbjct: 1   MSRYTGPVCRLCRAEGTKLFLKGDRCYTEKCAIARRNTRPGQHGA-RKGKTSEYGIRLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++++YG ++E +F  +++ A +  G T H+ +  LE RLD +VYR  F  +   AR+
Sbjct: 60  KQKLRRFYG-LNESQFAKMYEMATKMPGQTGHDFLQLLERRLDNVVYRLGFAVSRRQARE 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H H LVNGR +++ S   + GDV+ V++KS+ +  + + +++A +R VP ++ VN +
Sbjct: 119 LVRHGHFLVNGRKLDVPSALLRAGDVVTVREKSRDVEVLKQNAEVASQRSVPGWLEVNPE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M    V +P+  +     V +   LVVEFY+R
Sbjct: 179 TMSGRVVSLPTRDQ---IEVPVNEQLVVEFYAR 208


>gi|326793582|ref|YP_004311402.1| ribosomal protein S4 [Marinomonas mediterranea MMB-1]
 gi|326544346|gb|ADZ89566.1| ribosomal protein S4 [Marinomonas mediterranea MMB-1]
          Length = 206

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L  +     + ++      PG+HG  R+ + S +GLQLR KQ
Sbjct: 1   MARYLGPTCKLSRREGTDLLLKSGARALESKCKAETVPGVHGA-RRGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K A R +G T  NL+  LESRLD +VYRA F  T   ARQ V
Sbjct: 60  KVRRTYGVL-EKQFRNYYKHAARIKGATGENLLQLLESRLDNVVYRAGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
            H+ +LVNG +VN+ SY+ K GDV+ +++K+K+   +  A +L+  R    +I V+   +
Sbjct: 119 GHKGILVNGETVNVASYQVKAGDVVSIREKAKKQLRIQNALELSKNRTSIHWIEVDATKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ATF   P           +  NL+VE YS+
Sbjct: 179 EATFKAAPERAD---LSAEINENLIVELYSK 206


>gi|30248442|ref|NP_840512.1| 30S ribosomal protein S4 [Nitrosomonas europaea ATCC 19718]
 gi|41017978|sp|Q82X70|RS4A_NITEU RecName: Full=30S ribosomal protein S4 A
 gi|30138328|emb|CAD84336.1| Ribosomal protein S4:S4 domain [Nitrosomonas europaea ATCC 19718]
          Length = 208

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++  + K +  RR GE L+ +       K P+  R+Y PG HGQ +K + S + +QLR 
Sbjct: 1   MARNINPKCRQCRREGEKLFLKGDKCFSDKCPIERRNYPPGQHGQ-KKVRLSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR+++K AD+ +G T  NL+  LESRLD + Y   F  +   ARQ
Sbjct: 60  KQKIRRIYG-LLENQFRNVYKRADKQKGVTGDNLLQLLESRLDNVAYNMGFGSSRSEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  VL+NG+  NI S+  + GD+IE+ + +K    +  + + A+ R +P ++ V+ D
Sbjct: 119 IVRHNCVLLNGKRANIPSHLVEPGDLIEIAEHAKSYLRIKASIEAAKRRSIPSWLEVDFD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+   +   P           +  +LVVE YS+
Sbjct: 179 NLKGLYKSKPERSD---LSSTINESLVVELYSK 208


>gi|77918341|ref|YP_356156.1| 30S ribosomal protein S4 [Pelobacter carbinolicus DSM 2380]
 gi|90101701|sp|Q3A6M1|RS4_PELCD RecName: Full=30S ribosomal protein S4
 gi|77544424|gb|ABA87986.1| SSU ribosomal protein S4P [Pelobacter carbinolicus DSM 2380]
          Length = 209

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K  +  R+Y PG HGQ R +K S +G QLR 
Sbjct: 1   MARYTGPVCRLCRRETMKLFLKGDRCYTDKCALERRNYAPGQHGQGR-TKVSDYGTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ+MK+ YG + EK+FR+ F +AD  +G T  NL+  LE RLD+ VYR  F  +    R 
Sbjct: 60  KQRMKRTYG-LLEKQFRAYFDKADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRA 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V   H LVNGR VNI SY  +  DVIE+++KS+++  + +A      R +P ++ ++ +
Sbjct: 119 LVRQGHFLVNGRKVNIPSYVMRPNDVIELREKSRKITRINDALDGVMRRGLPSWVELDRE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF  +P   +        Q  L+VE YS+
Sbjct: 179 AFKGTFKTLPVREEMTT--PAFQEQLIVELYSK 209


>gi|26399543|sp|Q9S0Q9|RS4_SHEVI RecName: Full=30S ribosomal protein S4
 gi|5913931|dbj|BAA84524.1| ribosomal protein S4 [Shewanella violacea]
          Length = 206

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK++ S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETPPGRHGA-RKTRLSEYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G+T  NL++ LE+RLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARQKGNTGENLLTLLETRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVNG  VNI S++    DVI +++KSK+ A +  + ++A +R+ P ++ V++  M
Sbjct: 119 SHKSILVNGSVVNIPSFKVSASDVISIREKSKKQARISASLEVASQREKPTWVEVDNTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE  S+
Sbjct: 179 EGAFKRLPERSD---LSAEINEQLIVELCSK 206


>gi|227550803|ref|ZP_03980852.1| 30S ribosomal protein S4 [Enterococcus faecium TX1330]
 gi|257878795|ref|ZP_05658448.1| ribosomal protein S4 [Enterococcus faecium 1,230,933]
 gi|257881433|ref|ZP_05661086.1| ribosomal protein S4 [Enterococcus faecium 1,231,502]
 gi|257885703|ref|ZP_05665356.1| ribosomal protein S4 [Enterococcus faecium 1,231,501]
 gi|257887941|ref|ZP_05667594.1| ribosomal protein S4 [Enterococcus faecium 1,141,733]
 gi|257890654|ref|ZP_05670307.1| ribosomal protein S4 [Enterococcus faecium 1,231,410]
 gi|257893257|ref|ZP_05672910.1| ribosomal protein S4 [Enterococcus faecium 1,231,408]
 gi|257896441|ref|ZP_05676094.1| ribosomal protein S4 [Enterococcus faecium Com12]
 gi|257899415|ref|ZP_05679068.1| ribosomal protein S4 [Enterococcus faecium Com15]
 gi|258615136|ref|ZP_05712906.1| 30S ribosomal protein S4 [Enterococcus faecium DO]
 gi|260558361|ref|ZP_05830557.1| ribosomal protein S4 [Enterococcus faecium C68]
 gi|261207068|ref|ZP_05921757.1| ribosomal protein S4 [Enterococcus faecium TC 6]
 gi|289565930|ref|ZP_06446370.1| 30S ribosomal protein S4 [Enterococcus faecium D344SRF]
 gi|293379587|ref|ZP_06625726.1| ribosomal protein S4 [Enterococcus faecium PC4.1]
 gi|293556844|ref|ZP_06675405.1| ribosomal protein S4 [Enterococcus faecium E1039]
 gi|293563783|ref|ZP_06678222.1| ribosomal protein S4 [Enterococcus faecium E1162]
 gi|293567853|ref|ZP_06679194.1| ribosomal protein S4 [Enterococcus faecium E1071]
 gi|294614629|ref|ZP_06694533.1| ribosomal protein S4 [Enterococcus faecium E1636]
 gi|294618566|ref|ZP_06698125.1| ribosomal protein S4 [Enterococcus faecium E1679]
 gi|294622064|ref|ZP_06701197.1| ribosomal protein S4 [Enterococcus faecium U0317]
 gi|314938819|ref|ZP_07846090.1| ribosomal protein S4 [Enterococcus faecium TX0133a04]
 gi|314943624|ref|ZP_07850378.1| ribosomal protein S4 [Enterococcus faecium TX0133C]
 gi|314948703|ref|ZP_07852076.1| ribosomal protein S4 [Enterococcus faecium TX0082]
 gi|314952153|ref|ZP_07855171.1| ribosomal protein S4 [Enterococcus faecium TX0133A]
 gi|314991873|ref|ZP_07857330.1| ribosomal protein S4 [Enterococcus faecium TX0133B]
 gi|314996586|ref|ZP_07861621.1| ribosomal protein S4 [Enterococcus faecium TX0133a01]
 gi|227180040|gb|EEI61012.1| 30S ribosomal protein S4 [Enterococcus faecium TX1330]
 gi|257813023|gb|EEV41781.1| ribosomal protein S4 [Enterococcus faecium 1,230,933]
 gi|257817091|gb|EEV44419.1| ribosomal protein S4 [Enterococcus faecium 1,231,502]
 gi|257821559|gb|EEV48689.1| ribosomal protein S4 [Enterococcus faecium 1,231,501]
 gi|257823995|gb|EEV50927.1| ribosomal protein S4 [Enterococcus faecium 1,141,733]
 gi|257827014|gb|EEV53640.1| ribosomal protein S4 [Enterococcus faecium 1,231,410]
 gi|257829636|gb|EEV56243.1| ribosomal protein S4 [Enterococcus faecium 1,231,408]
 gi|257833006|gb|EEV59427.1| ribosomal protein S4 [Enterococcus faecium Com12]
 gi|257837327|gb|EEV62401.1| ribosomal protein S4 [Enterococcus faecium Com15]
 gi|260075535|gb|EEW63841.1| ribosomal protein S4 [Enterococcus faecium C68]
 gi|260078696|gb|EEW66398.1| ribosomal protein S4 [Enterococcus faecium TC 6]
 gi|289162303|gb|EFD10163.1| 30S ribosomal protein S4 [Enterococcus faecium D344SRF]
 gi|291589438|gb|EFF21245.1| ribosomal protein S4 [Enterococcus faecium E1071]
 gi|291592531|gb|EFF24136.1| ribosomal protein S4 [Enterococcus faecium E1636]
 gi|291595179|gb|EFF26513.1| ribosomal protein S4 [Enterococcus faecium E1679]
 gi|291598362|gb|EFF29446.1| ribosomal protein S4 [Enterococcus faecium U0317]
 gi|291600928|gb|EFF31219.1| ribosomal protein S4 [Enterococcus faecium E1039]
 gi|291604264|gb|EFF33759.1| ribosomal protein S4 [Enterococcus faecium E1162]
 gi|292641803|gb|EFF59974.1| ribosomal protein S4 [Enterococcus faecium PC4.1]
 gi|313589275|gb|EFR68120.1| ribosomal protein S4 [Enterococcus faecium TX0133a01]
 gi|313593578|gb|EFR72423.1| ribosomal protein S4 [Enterococcus faecium TX0133B]
 gi|313595685|gb|EFR74530.1| ribosomal protein S4 [Enterococcus faecium TX0133A]
 gi|313597661|gb|EFR76506.1| ribosomal protein S4 [Enterococcus faecium TX0133C]
 gi|313641830|gb|EFS06410.1| ribosomal protein S4 [Enterococcus faecium TX0133a04]
 gi|313644875|gb|EFS09455.1| ribosomal protein S4 [Enterococcus faecium TX0082]
          Length = 203

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      KI RR+G +L G  K  +  R Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKISRRLGISLSGTGKE-LARRPYAPGQHGPNSRGKQSEYGMQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFRNLFVKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  + G VI V++KS+ + +V EA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYHVEVGQVISVREKSQNIVTVKEAVE-ATVGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +  P    +   LVVE+Y
Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199


>gi|15837777|ref|NP_298465.1| 30S ribosomal protein S4 [Xylella fastidiosa 9a5c]
 gi|26399518|sp|Q9PE53|RS4_XYLFA RecName: Full=30S ribosomal protein S4
 gi|9106141|gb|AAF83985.1|AE003951_10 30S ribosomal protein S4 [Xylella fastidiosa 9a5c]
          Length = 208

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 16/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G +L  +        K  +  R   PG HG  RKSK S +  QLR
Sbjct: 1   MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQR---PGQHGAVRKSKLSDYASQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR+ +K A   +G+T  NL+  LE+RLD ++YR  F  T  AAR
Sbjct: 58  EKQKVKRIYGVL-ERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAAR 116

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVN 171
           Q V+HR VLVNG+ VN+ SY  K GDV+ + Q++++   V E+  + ++      ++ V+
Sbjct: 117 QLVSHRRVLVNGKLVNLPSYHVKPGDVVALSQRAQKYLCVQESLTIKDQHGSAFSWVEVD 176

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +     F   P        P  +   L+VE YS+
Sbjct: 177 SEKFSGVFKAFPDRAD---LPSDINEALIVELYSK 208


>gi|310642769|ref|YP_003947527.1| 30S ribosomal protein s4 [Paenibacillus polymyxa SC2]
 gi|309247719|gb|ADO57286.1| 30S ribosomal protein S4 [Paenibacillus polymyxa SC2]
          Length = 199

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K+ RR+G +L G  K     R + PG HG  ++ K S +G+QL+ KQK++ 
Sbjct: 1   MARYTGPKFKLSRRLGISLSGTGKEL--KRPFPPGQHGANQRRKISNYGMQLQEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F +A    G    N +  LESRLD +V+R  F  +   ARQ V H H
Sbjct: 59  MYG-LGEKQFRTLFNKAQHMHGIAGENFMFLLESRLDNLVFRLGFANSRAGARQLVAHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V+I SY+   GDVI ++++S+ L+S+ EA +     +  Y+  N   +   ++
Sbjct: 118 VTVNGKKVDIASYQVSPGDVIGLRERSRSLSSIKEALE-NRNHLVAYLEYNDAALEGKYI 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFY+R
Sbjct: 177 RLPERAE---LSQDIDEKQIVEFYNR 199


>gi|116624175|ref|YP_826331.1| 30S ribosomal protein S4P [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122253109|sp|Q01WB9|RS4_SOLUE RecName: Full=30S ribosomal protein S4
 gi|116227337|gb|ABJ86046.1| SSU ribosomal protein S4P [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 210

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 10/213 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      +  RR G  L+ +       K  +  R++ PG HG+ R  K   +GLQLR 
Sbjct: 1   MARYIGPVCRQCRREGMKLYLKGERCHSEKCAIEKRNFIPGQHGKDRAKKIVGYGLQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++FR+ F++A   +G T  NL+  LE RLD+++YR  F  +   ARQ
Sbjct: 61  KQKVRRVYGVL-ERQFRNAFEKAALQKGITGENLMQNLERRLDSVIYRMGFGTSRAQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+ VNGR  NI S     GD I V++ SK  A++L A    A    P +I V+ +
Sbjct: 120 VVRHGHINVNGRKCNIPSALINVGDEITVRETSKNNATILSARDATAHAPAPNWIEVDRE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P     V   + +   L+VE YS+
Sbjct: 180 GLKGRVQSLPKREDLVQ--IQLNEQLIVELYSK 210


>gi|257792535|ref|YP_003183141.1| 30S ribosomal protein S4 [Eggerthella lenta DSM 2243]
 gi|257476432|gb|ACV56752.1| ribosomal protein S4 [Eggerthella lenta DSM 2243]
          Length = 208

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K  +  R+Y PG  G++R  +  Y   QLR 
Sbjct: 1   MARYTGADCRLCRREGAKLFLKGDRCYTEKCAIERRNYAPGEAGKKRIKESEYRN-QLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + EK+FR  +  A+R +G T  NL+  LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQKTKRIYGVL-EKQFRHYYDMANRQKGVTGENLLRILESRLDNVVYRLGFAKSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V H H+ VNGR V+I S+R K GD++ V  K+  L  +  A    ER  VP ++ V+ +
Sbjct: 119 QVRHGHITVNGRRVDIPSFRVKPGDLVAVAPKAADLLVIKSALISNERVQVPSWLEVDIE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  + + +P   +     + ++  L+VE YS+
Sbjct: 179 KLQGSVLALPQRDQ---IDLDIREQLIVELYSK 208


>gi|255530540|ref|YP_003090912.1| 30S ribosomal protein S4 [Pedobacter heparinus DSM 2366]
 gi|255343524|gb|ACU02850.1| ribosomal protein S4 [Pedobacter heparinus DSM 2366]
          Length = 202

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R+  E ++G  K  ++ ++Y PG HG  +R+ K S + +QL  KQK+K
Sbjct: 1   MARYTGPKSKIARKFREPIFGPDK-VLDRKNYPPGQHGASKRRGKQSEYAVQLMEKQKVK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR++F +A    G T  NL+  LE+RLD  VYR     T  AARQ V+H+
Sbjct: 60  YTYGVL-ERQFRNLFTKASSRGGITGDNLLQLLEARLDNTVYRLGIATTRSAARQLVSHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV VNG  VNI SY+ K GDVI V+QKSK L ++  +      +   ++  N   +   F
Sbjct: 119 HVTVNGEVVNIPSYQLKAGDVIAVRQKSKTLEAITNSVAGRVINKFNWLDWNASELSGKF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P+  +    P  ++ NL+VE YS+
Sbjct: 179 LAYPNRDE---IPENIKENLIVELYSK 202


>gi|37912969|gb|AAR05301.1| ribosomal protein S4 [uncultured marine gamma proteobacterium
           EB000-45B06]
 gi|40063200|gb|AAR38037.1| ribosomal protein S4 [uncultured marine bacterium 562]
          Length = 207

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      ++ RR G +L+ +     + ++      PG+    R+ + S +GLQLR KQ
Sbjct: 1   MARYTGPTLRLSRREGTDLYLKSGVRAIESKCNMDSPPGVAAGARRGRLSDYGLQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A  ++G+T  NL+S LE R+D +VYR  F  T   ARQ V
Sbjct: 61  KVRRMYGVL-EKQFRNYYKKAASTKGNTGENLLSLLEKRMDNVVYRMGFGSTRAEARQMV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H+   VNG  VNI SY+ K GD ++V+   K    +  A ++ A R+  +++ V+  N+
Sbjct: 120 SHKAFKVNGEVVNIPSYQMKAGDEVQVRDNKKGHLRIAAALKIAATREDCDWLEVDEANL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  +P           +  NL++E YS+
Sbjct: 180 KGVFKSVPDRTD---LSTEINENLIIELYSK 207


>gi|187932119|ref|YP_001892104.1| 30S ribosomal protein S4 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|226699067|sp|B2SDW1|RS4_FRATM RecName: Full=30S ribosomal protein S4
 gi|187713028|gb|ACD31325.1| 30S ribosomal protein S4 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 206

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     N      +  PG HG  R+++ S +GLQLR +Q
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLRERQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E +F+  + EA R +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYG-ILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H+ ++VNG + N+ S + K GDV+ V++K+K+   +  A +LA+ R    +I VN D++
Sbjct: 119 VHKGIMVNGHTCNVPSAQVKAGDVVAVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T    P   +       +   L++E YS+
Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206


>gi|55821964|ref|YP_140406.1| 30S ribosomal protein S4 [Streptococcus thermophilus LMG 18311]
 gi|55823881|ref|YP_142322.1| 30S ribosomal protein S4 [Streptococcus thermophilus CNRZ1066]
 gi|55737949|gb|AAV61591.1| 30S ribosomal protein S4 [Streptococcus thermophilus LMG 18311]
 gi|55739866|gb|AAV63507.1| 30S ribosomal protein S4 [Streptococcus thermophilus CNRZ1066]
          Length = 217

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 15  MSRYTGPSWKQSRRLGFSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 73

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG +SEK+FR++F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 74  SYG-LSEKQFRNLFVQATKVKGGTLGFNFMILLERRLDNVVYRLGLATTRRQARQFVNHG 132

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 133 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVE-ATIGRPAFVSFDAEKLEGSL 191

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 192 TRLPERDE---INPEINEALVVEFYNK 215


>gi|37523141|ref|NP_926518.1| 30S ribosomal protein S4 [Gloeobacter violaceus PCC 7421]
 gi|41017822|sp|Q7NFF4|RS4_GLOVI RecName: Full=30S ribosomal protein S4
 gi|35214144|dbj|BAC91513.1| 30S ribosomal protein S4 [Gloeobacter violaceus PCC 7421]
          Length = 206

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ R +G  L+ +      PK  +  R++ PG+HGQ R+    Y  ++L+ 
Sbjct: 1   MARYTGPVCKLCRAVGMKLYLKGIRCSSPKCAIERRNFRPGVHGQARQKLSEY-AIRLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK +  YG + EK+FR  F +A R+ G+T    +  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKARWSYGVL-EKQFRRTFSDASRATGNTGAKFLELLERRLDNVVYRLGFATSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173
           +VNH H  VNGR V+I SYR + GD I V       A V EA + A     P+++  N +
Sbjct: 119 WVNHGHFAVNGRRVSIPSYRVRPGDAITVMP--NSAAFVKEALEAASLPQAPKWLEANRE 176

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + AT   +P   +D+  PV  Q  L+VEFYSR
Sbjct: 177 TLAATVKALPER-EDIDTPV--QELLIVEFYSR 206


>gi|317490401|ref|ZP_07948885.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA]
 gi|325833388|ref|ZP_08165837.1| ribosomal protein S4 [Eggerthella sp. HGA1]
 gi|316910536|gb|EFV32161.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA]
 gi|325485312|gb|EGC87781.1| ribosomal protein S4 [Eggerthella sp. HGA1]
          Length = 208

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K  +  R+Y PG  G++R  +  Y   QLR 
Sbjct: 1   MARYTGADCRLCRREGAKLFLKGDRCYTEKCAIERRNYAPGEAGKKRIKESEYRN-QLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + EK+FR  +  A+R +G T  NL+  LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQKTKRIYGVL-EKQFRHYYDMANRQKGVTGENLLRILESRLDNVVYRLGFAKSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V H H+ VNGR V+I S+R K GD++ V  K+  L  +  A    ER  VP ++ V+ +
Sbjct: 119 QVRHGHITVNGRRVDIPSFRVKPGDLVAVAPKAADLLVIKSALISNERVQVPAWLEVDIE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  + + +P   +     + ++  L+VE YS+
Sbjct: 179 KLQGSVLALPQRDQ---IDLDIREQLIVELYSK 208


>gi|161616441|ref|YP_001590406.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|224585211|ref|YP_002639010.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|161365805|gb|ABX69573.1| hypothetical protein SPAB_04256 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|224469739|gb|ACN47569.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|321226467|gb|EFX51517.1| SSU ribosomal protein S4p (S9e) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 202

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 124/207 (59%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M  T+
Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTY 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P           +  +L+VE YS+
Sbjct: 179 KRKPERSD---LSADINEHLIVELYSK 202


>gi|193211877|ref|YP_001997830.1| 30S ribosomal protein S4 [Chlorobaculum parvum NCIB 8327]
 gi|226697821|sp|B3QR97|RS4_CHLP8 RecName: Full=30S ribosomal protein S4
 gi|193085354|gb|ACF10630.1| ribosomal protein S4 [Chlorobaculum parvum NCIB 8327]
          Length = 203

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 117/207 (56%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R Y PG HGQ R+ K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGIALSPKAEKYLERRPYAPGEHGQSRRGKVSEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +K+A   RG T  NL+  LE R D +VYR  F P+   ARQ V H H
Sbjct: 61  LYGVL-EKQFRIYYKKAVAQRGVTGDNLVKMLERRFDNVVYRCGFSPSRAGARQLVTHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI S+    GD IE +QKS+ L +V ++    AE  +PE+I V+  N  A F
Sbjct: 120 MLVNGKKVNIPSFLVSPGDQIEFRQKSRNLDAVADSLNKAAESRIPEWIQVDKANRKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + IP               LVVE YS+
Sbjct: 180 LAIPER---EAVQEPFNEQLVVELYSK 203


>gi|187776603|ref|ZP_02993076.1| hypothetical protein CLOSPO_00117 [Clostridium sporogenes ATCC
           15579]
 gi|187775262|gb|EDU39064.1| hypothetical protein CLOSPO_00117 [Clostridium sporogenes ATCC
           15579]
          Length = 206

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     R Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MARYTGATCRLCRREGLKLFLKGDRCYTDKCAFARRGYAPGQHGQSRK-KVSNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG I E++FR  ++EADR RG T  NL+  LE RLD +V+R  +  +   ARQ
Sbjct: 60  KQKAKRIYG-ILERQFRGYYEEADRRRGITGENLLRLLEMRLDNVVFRLGYGNSRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H L+NG+ V+I SY+    DVI V  KSK        ++   + +P ++S N + 
Sbjct: 119 LVTHGHFLINGKKVDIPSYQVSANDVITVCDKSKATEKFKTFAENP-KTLPAWLSGNVEG 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 R P+  +D+  PV     L+VE YS+
Sbjct: 178 FEGKVERQPAR-EDIDVPV--NETLIVELYSK 206


>gi|212704608|ref|ZP_03312736.1| hypothetical protein DESPIG_02670 [Desulfovibrio piger ATCC 29098]
 gi|212672007|gb|EEB32490.1| hypothetical protein DESPIG_02670 [Desulfovibrio piger ATCC 29098]
          Length = 208

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +K +I RR G  L+ +       K   + R Y PG HG+ RK    Y  +QLR 
Sbjct: 1   MAKYTEAKCRICRREGCKLFLKGDRCFTDKCAYDRRPYAPGQHGRARKKVSEY-AVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I EK+FR  F++A+  +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKTRRSYG-ILEKQFRGYFEKAEMQKGVTGTNLLVILERRLDNVVYRLGFANSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NG  V I S + + GD IEV +K++++  + EA + +A R  P ++  +  
Sbjct: 119 LVRHGIFTLNGHKVTIPSLQVRVGDTIEVPEKNRKIPVLAEAQEVIARRGCPAWLEADGA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P    D+ +PV     L+VE YS+
Sbjct: 179 AFKGTVKALPQR-DDIQFPV--NEQLIVELYSK 208


>gi|298492220|ref|YP_003722397.1| 30S ribosomal protein S4 ['Nostoc azollae' 0708]
 gi|298234138|gb|ADI65274.1| ribosomal protein S4 ['Nostoc azollae' 0708]
          Length = 202

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+GE      KS    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGELPGLTRKSA--RRAYAPGQHGQNRKKRSEY-AIRLEEKQKLRL 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     ++A R  G T   L+  LE RLD  V+R    PTI  ARQ VNH H
Sbjct: 58  NYG-LTEKQMLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRMGMAPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR VNI SY+C+ G+ I V+        V    Q     ++P ++  + + +    
Sbjct: 117 VTVNGRVVNIASYQCRPGEEIAVRDNEASKKLVESNLQYPGLANLPNHLEFDKNKLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200


>gi|153871948|ref|ZP_02000981.1| 30S ribosomal protein S4 [Beggiatoa sp. PS]
 gi|152071584|gb|EDN69017.1| 30S ribosomal protein S4 [Beggiatoa sp. PS]
          Length = 206

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS----PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ + ++            PG HG +R  + S + LQLR KQ
Sbjct: 1   MARYLGPKCKLSRREGVDLFLKSRARGLESKCKLEKLPGQHGDKRP-RLSDYALQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F + + +A R +G T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KLRRLYGVL-ERQFHNYYLKASRKKGSTGENLLMLLEGRLDNVVYRMGFAVTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVN +SVNI SY+ K GDVI ++ KS+    +  A   A E ++PE++ V+ + M
Sbjct: 119 SHKAILVNEKSVNIPSYQVKAGDVIAIRGKSRTQLRIKAALSQAVEFELPEWVEVDVEKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F   P+  +    P  M   LVVE YS+
Sbjct: 179 SGVFKAQPTIGE---LPGDMNVQLVVELYSK 206


>gi|114330597|ref|YP_746819.1| 30S ribosomal protein S4 [Nitrosomonas eutropha C91]
 gi|122314409|sp|Q0AIH2|RS4_NITEC RecName: Full=30S ribosomal protein S4
 gi|114307611|gb|ABI58854.1| SSU ribosomal protein S4P [Nitrosomonas eutropha C91]
          Length = 208

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++  + K +  RR GE L+ +       K P+  R+Y PG HGQ RK++ S + +QLR 
Sbjct: 1   MARNINPKCRQCRREGEKLFLKGDKCFSDKCPIERRNYPPGQHGQ-RKTRLSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR+++K ADR +G T  NL+  LESRLD + Y   F  +   ARQ
Sbjct: 60  KQKIRRIYG-LLENQFRNVYKRADRQKGITGENLLKLLESRLDNVAYNMGFGASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            + H  +L+NG+  NI S     GD IEV + +K    +  + +LA+ R +P ++ V+ D
Sbjct: 119 IIRHDCILLNGKKANIPSQLIGPGDQIEVAEHAKSYLRIKSSIELAKRRSIPSWLEVDFD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+   +   P           +  +LVVE YS+
Sbjct: 179 NLKGLYKNKPDRSD---LSSTINESLVVELYSK 208


>gi|116618921|ref|YP_819292.1| SSU ribosomal protein S4P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270879|sp|Q03V53|RS4_LEUMM RecName: Full=30S ribosomal protein S4
 gi|116097768|gb|ABJ62919.1| SSU ribosomal protein S4P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 203

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 74/205 (36%), Positives = 123/205 (60%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K +I RR+G +L G  K  ++ R+Y PG HG  R++K S +G+QLR KQK++ 
Sbjct: 1   MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGMQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F +A + R  T   N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 60  TYG-LTERQFKALFNKAGKIRKGTHGTNFMISLEQRLDSVVYRLGLATTRQQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  + G V+ V++KSK +  +  A +      P+++S++ + +  + 
Sbjct: 119 HILVDGKRVDIPSYSVQPGQVVSVREKSKNILPIQAAIESVVAR-PQFVSLDTEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +       +   L+VE+Y
Sbjct: 178 VRLPEREE---LDADINEALIVEYY 199


>gi|158337110|ref|YP_001518285.1| 30S ribosomal protein S4 [Acaryochloris marina MBIC11017]
 gi|189045361|sp|B0C9F5|RS4_ACAM1 RecName: Full=30S ribosomal protein S4
 gi|158307351|gb|ABW28968.1| 30S ribosomal protein S4 [Acaryochloris marina MBIC11017]
          Length = 202

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+P   R+Y PG HGQ RK +  Y   QL  KQK++ 
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQARKKRSEYAA-QLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     ++A R+ G T   L+  LE RLD  ++R    PTI AARQ VNH H
Sbjct: 58  NYG-LSERQLLRYVRKARRAGGSTGQTLLQLLEMRLDNTIFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNGR V+I SY+C+ GDVI+ + +      +    Q     ++P ++  + + +    
Sbjct: 117 VLVNGRVVSIASYQCRPGDVIQSRDRDASRKLIETHMQFPGLANIPTHLDFDKNTLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIER---EWIALEINELLVVEYYSR 200


>gi|227513091|ref|ZP_03943140.1| 30S ribosomal protein S4 [Lactobacillus buchneri ATCC 11577]
 gi|227083666|gb|EEI18978.1| 30S ribosomal protein S4 [Lactobacillus buchneri ATCC 11577]
          Length = 231

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G +L G  K  ++ R Y PG HGQ R+ K S +GLQL+ KQK++ 
Sbjct: 29  MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRQKLSEYGLQLKEKQKLRY 87

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + R      N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 88  MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLERRLDNIVYRLGLATTRRQARQLVNHG 146

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G V+ V++KSK L  V  A + A    P+Y+S + D +  + 
Sbjct: 147 HITVDGKRVDIPSYEVKTGQVVSVREKSKDLQVVKNAVE-AVVGRPQYVSFDADKLEGSL 205

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +  +L+VE+Y++
Sbjct: 206 VRLPQREE---LDADIDESLIVEYYNK 229


>gi|28378911|ref|NP_785803.1| 30S ribosomal protein S4 [Lactobacillus plantarum WCFS1]
 gi|254557116|ref|YP_003063533.1| 30S ribosomal protein S4 [Lactobacillus plantarum JDM1]
 gi|300769694|ref|ZP_07079577.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308181113|ref|YP_003925241.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258326|sp|Q88UX0|RS4_LACPL RecName: Full=30S ribosomal protein S4
 gi|28271748|emb|CAD64654.1| ribosomal protein S4 [Lactobacillus plantarum WCFS1]
 gi|254046043|gb|ACT62836.1| 30S ribosomal protein S4 [Lactobacillus plantarum JDM1]
 gi|300492737|gb|EFK27922.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046604|gb|ADN99147.1| 30S ribosomal protein S4 [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 202

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      KI RR+G +L G  K  +  R Y PG HGQ R+ K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWKISRRLGMSLSGTGKE-LARRPYAPGDHGQGRRGKLSEYGTQLREKQKLRM 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F +A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-LTERQFANLFIKAGKIREGKHGVNFMILLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G V+ V++KSK+LA +  A + A    P ++  + D +  + 
Sbjct: 119 HITVDGKRVDIPSYEVSVGQVVSVREKSKKLAVITGAVE-AVVARPNFVQFDADKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +  +L+VE+Y++
Sbjct: 178 TRLPEREE---LEADIDESLIVEYYNK 201


>gi|283853178|ref|ZP_06370431.1| ribosomal protein S4 [Desulfovibrio sp. FW1012B]
 gi|283571436|gb|EFC19443.1| ribosomal protein S4 [Desulfovibrio sp. FW1012B]
          Length = 208

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K +I RR G  L+ +       K     R Y PG HG+ RK K S + + LR 
Sbjct: 1   MARYTEAKCRICRREGGKLFLKGDRCYTDKCAYERRPYAPGQHGRIRK-KMSDYAVMLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR+ F+ AD  +G T  NL+SFLE R+D +VYR  F  +   ARQ
Sbjct: 60  KQKTRRMYG-ILEGQFRAYFQRADMKKGVTGENLLSFLERRMDNVVYRLGFANSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H   ++NG  V I S + K GDVIEV++K++Q   +LEA Q +A R  P ++ V+ +
Sbjct: 119 LVRHGLFVLNGHRVTIPSLQVKVGDVIEVREKNRQSPIILEAQQVIARRGCPAWLEVDGE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P+  +DV +P  +   L+VE YS+
Sbjct: 179 KLKGKVNALPTR-EDVQFP--INEQLIVELYSK 208


>gi|325288604|ref|YP_004264785.1| SSU ribosomal protein S4P [Syntrophobotulus glycolicus DSM 8271]
 gi|324964005|gb|ADY54784.1| SSU ribosomal protein S4P [Syntrophobotulus glycolicus DSM 8271]
          Length = 209

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   S  ++ RR G  L+ +       K  ++ R Y PG+HGQ R  KPS FG+QLR 
Sbjct: 1   MAKYTDSVCRLCRREGIKLFLKGDRCYTNKCSIDRRPYAPGVHGQSRGRKPSDFGIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I EK+FR  F+ A R +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 61  KQKARRIYG-IMEKQFRRYFEMASRQKGMTGENLLRLLERRLDNVVYRIGFASSRAEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
           FV H H+ VNG+ V+I SY  K G+VI V +KS+  + + E    +A+R VP ++S + +
Sbjct: 120 FVTHGHITVNGKRVDIASYLIKVGEVIAVNEKSRSSSRIKELIDTMADRSVPGWLSADSN 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   T + +PS  +D+  P  ++ + +VE YSR
Sbjct: 180 SASGTVLALPSR-EDIQIP--IEEHFIVEKYSR 209


>gi|119899681|ref|YP_934894.1| 30S ribosomal protein S4 [Azoarcus sp. BH72]
 gi|152060933|sp|A1KB02|RS4_AZOSB RecName: Full=30S ribosomal protein S4
 gi|119672094|emb|CAL96008.1| 30S ribosomal protein S4 [Azoarcus sp. BH72]
          Length = 209

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R+Y PG HGQR   + S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQRSGQRLSGYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++FR ++ EADR RG T  NL+  LE RLD++ YR  F  +   ARQ
Sbjct: 61  KQKIRRLYGVL-ERQFRKVYAEADRRRGQTGENLLQLLEGRLDSVAYRMGFGASRAEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  VLVNG+ VNI SY  + GDVIE+ + +K    V  A + AE R  PE+I V+  
Sbjct: 120 VVRHNGVLVNGKRVNIPSYTVRPGDVIELAEGTKGHLRVKAALEAAESRGFPEWIEVDAK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F   P   +       +   LVVE YSR
Sbjct: 180 AGKGVFKAYPQRSE---LSATINEGLVVELYSR 209


>gi|255526606|ref|ZP_05393513.1| ribosomal protein S4 [Clostridium carboxidivorans P7]
 gi|296187295|ref|ZP_06855691.1| ribosomal protein S4 [Clostridium carboxidivorans P7]
 gi|255509714|gb|EET86047.1| ribosomal protein S4 [Clostridium carboxidivorans P7]
 gi|296048166|gb|EFG87604.1| ribosomal protein S4 [Clostridium carboxidivorans P7]
          Length = 206

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K  V+ R Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MARYTGAVCRLCRREGLKLFLKGDRCFTDKCAVSRRGYAPGQHGQSRK-KVSNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + E +FR+ +++A+R RG +  NL+  LE RLD + Y+  +  +   ARQ
Sbjct: 60  KQKARRIYGVL-EGQFRTYYEKAERKRGISGENLLKLLEMRLDNVAYKFGYGNSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H L+NG+ V+I SY+   GDVI V +KS+        ++   + +P ++  N +N
Sbjct: 119 LVTHGHFLINGKKVDIASYQVSAGDVITVSEKSRSTERFKTFAENP-KALPAWLEGNPEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VR PS  +D+  PV     L+VE YS+
Sbjct: 178 FEGKIVREPSR-EDIDVPV--NETLIVELYSK 206


>gi|227529662|ref|ZP_03959711.1| 30S ribosomal protein S4 [Lactobacillus vaginalis ATCC 49540]
 gi|227350452|gb|EEJ40743.1| 30S ribosomal protein S4 [Lactobacillus vaginalis ATCC 49540]
          Length = 220

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      ++ RR+G +L G  K  +  R+Y PG HG+ R  K S +G QLR KQK++ 
Sbjct: 20  MSRYTGPSWRLSRRLGVSLSGTGKE-LARRAYAPGDHGRDRHGKLSEYGTQLREKQKLRF 78

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + +  T   N ++ LE RLD +VYR     T   ARQ VNH 
Sbjct: 79  MYG-MTERQFSNLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 137

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G VI V+ KSK L  +  A   A    P Y+  + D +    
Sbjct: 138 HITVDGKRVDIPSYEVSVGQVIAVRDKSKNLDVIKNAVD-AVVSRPSYVDFDADKLEGKL 196

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP+          +  +L+VEFY++
Sbjct: 197 NRIPAR---EDMDADIDESLIVEFYNK 220


>gi|56752482|ref|YP_173183.1| 30S ribosomal protein S4 [Synechococcus elongatus PCC 6301]
 gi|81300296|ref|YP_400504.1| 30S ribosomal protein S4 [Synechococcus elongatus PCC 7942]
 gi|61215367|sp|Q5MZ57|RS4_SYNP6 RecName: Full=30S ribosomal protein S4
 gi|123556802|sp|Q31N52|RS4_SYNE7 RecName: Full=30S ribosomal protein S4
 gi|56687441|dbj|BAD80663.1| 30S ribosomal protein S4 [Synechococcus elongatus PCC 6301]
 gi|81169177|gb|ABB57517.1| SSU ribosomal protein S4P [Synechococcus elongatus PCC 7942]
          Length = 202

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRKAA--RRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A R +G T  NL+  LE RLD +V+R  F PTI  ARQ VNH H
Sbjct: 58  NYG-LSERQLVRYVKKARRMQGSTGTNLLQLLEMRLDNLVFRLGFAPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR V+I SY C+ G+VI V+Q+      V    +     +VP ++  + + + A  
Sbjct: 117 VTVNGRVVDIASYNCRPGEVIGVRQREASRKLVTANLEYPGLANVPVHLDFDKNKLEAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 TGACER---EWVALQINELLVVEYYSR 200


>gi|312868744|ref|ZP_07728936.1| ribosomal protein S4 [Lactobacillus oris PB013-T2-3]
 gi|311095730|gb|EFQ53982.1| ribosomal protein S4 [Lactobacillus oris PB013-T2-3]
          Length = 201

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      ++ RR+G +L G  K  +  R Y PG HG+ R  K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWRVSRRLGVSLSGTGKE-LARRPYAPGDHGRDRHGKLSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + +  T   N ++ LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MTERQFANLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY      VI V++KSK L  +  A   A    P Y+  + D +    
Sbjct: 119 HITVDGKRVDIPSYEVDVNQVIGVREKSKNLDIIKNAVD-AVVSRPSYVDFDADKLEGKL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP+          +   L+VEFY++
Sbjct: 178 NRIPAR---EDMDADIDEALIVEFYNK 201


>gi|317485797|ref|ZP_07944661.1| ribosomal protein S4 [Bilophila wadsworthia 3_1_6]
 gi|316922903|gb|EFV44125.1| ribosomal protein S4 [Bilophila wadsworthia 3_1_6]
          Length = 208

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +K ++ RR G  L  +       K   + R Y PG HG+ RK K S + +QLR 
Sbjct: 1   MAKYNDAKCRLCRREGTKLLLKGDRCFTDKCAFDRRPYAPGQHGRARK-KLSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+F   F  AD ++G T  NL++FLE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVRRVYGVL-EKQFHGYFVHADMAKGVTGANLLAFLERRLDNVVYRLGFANSRTQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H    +NG  V I S + K GD +EV +KS+ +  + EA +  A R  P ++ V+  
Sbjct: 119 LVRHGVFTLNGHKVTIPSLQVKVGDSVEVPEKSRTIPVLAEAQEAVARRGCPSWLEVDAP 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N       +P    D+ +P  +  +L+VE YS+
Sbjct: 179 NFKGIVKALPQR-DDIQFP--INEHLIVELYSK 208


>gi|157964424|ref|YP_001499248.1| 30S ribosomal protein S4 [Rickettsia massiliae MTU5]
 gi|157844200|gb|ABV84701.1| 30S ribosomal protein S4 [Rickettsia massiliae MTU5]
          Length = 227

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 1/200 (0%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K +YG ++
Sbjct: 29  SKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 88

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+FR+IF  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H+ +NG+
Sbjct: 89  EKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 148

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
             +I S R K GDVIEVK+  KQ+  + E+     +  P Y+S +  ++   ++R+P+ L
Sbjct: 149 KADIASIRLKAGDVIEVKESVKQIPLIQESVSKQGQTTPGYLSFDVPSLTGKYLRVPA-L 207

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
            DVPYP   + +LV+E YSR
Sbjct: 208 SDVPYPFEAEVHLVIELYSR 227


>gi|293570759|ref|ZP_06681809.1| ribosomal protein S4 [Enterococcus faecium E980]
 gi|291609231|gb|EFF38503.1| ribosomal protein S4 [Enterococcus faecium E980]
          Length = 203

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      KI RR+G +L G  K  +  R Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKISRRLGISLSGTGKE-LARRPYAPGQHGPNSRGKQSEYGMQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFRNLFVKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  + G VI V++KS+   +V EA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYHVEVGQVISVREKSQNNVTVKEAVE-ATVGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +  P    +   LVVE+Y
Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199


>gi|223984454|ref|ZP_03634588.1| hypothetical protein HOLDEFILI_01882 [Holdemania filiformis DSM
           12042]
 gi|223963578|gb|EEF67956.1| hypothetical protein HOLDEFILI_01882 [Holdemania filiformis DSM
           12042]
          Length = 211

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G ++       +  R+Y PG HG  ++ K S +G QLR KQ+++ 
Sbjct: 12  MARNTGPVWKISRRLGFSI-LETGEELQRRTYAPGQHGPTKRIKLSNYGTQLREKQRIRN 70

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F + + +A++  G   HN +  LESRLD IVYR  F  T  AARQ VNH H
Sbjct: 71  MYG-VNERQFANTYIKAEKMAGVKGHNFLCLLESRLDNIVYRMGFARTRRAARQLVNHGH 129

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I S+  K G  +EVK+KSK +A + +A +     V  +++V+ +N   T+V
Sbjct: 130 ILVNGKKVDIPSFTVKPGSTVEVKEKSKSMACIADALEATLNTV-AFVTVDKENKKGTYV 188

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   LVVE+Y+R
Sbjct: 189 RMPERNE---LNQEINELLVVEYYNR 211


>gi|167626783|ref|YP_001677283.1| 30S ribosomal protein S4 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667363|ref|ZP_04754941.1| 30S ribosomal protein S4 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875913|ref|ZP_05248623.1| 30S ribosomal protein S4 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189045381|sp|B0U0W6|RS4_FRAP2 RecName: Full=30S ribosomal protein S4
 gi|158523431|gb|ABW70829.1| 30s ribosomal protein S4 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167596784|gb|ABZ86782.1| 30S ribosomal protein S4 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254841934|gb|EET20348.1| 30S ribosomal protein S4 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 206

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     N      +  PG HG  R+++ S +GLQLR KQ
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGA-RRARLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E +F+  + EA+R +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRMYGVL-EGQFKKYYVEANRRKGNTGATLLEILESRLDNVVYRMGFAATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H+ +++NG + N+ S + K GDV+ V++KSK+   +  A +LA+ R    +I VN D++
Sbjct: 119 VHKGIMLNGHTCNVPSAQVKAGDVVAVREKSKKQLRIQNAIELAKHRKELSWIDVNTDSL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             T    P   +       +   L++E YS+
Sbjct: 179 EGTMKSSPDRSE---LSADINEQLIIELYSK 206


>gi|45644720|gb|AAS73108.1| predicted ribosomal protein S4 [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 211

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 15/216 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS--------YGPGLHGQRRKSKPSYFGLQ 51
           M++      ++ RR G +L  +     + T+           PG+HG  R  + S +GLQ
Sbjct: 1   MARYRGPSLRLSRREGTDLLLKSGVRAIETKCRTDGNGGLKSPGVHGAMR-GRLSDYGLQ 59

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           LR KQK+++ YG + EK+FR+ +K+A  S+G+T  NL+S LE RLD +VYR  F  T   
Sbjct: 60  LREKQKVRRMYGVL-EKQFRNYYKKAASSKGNTGENLLSLLEKRLDNVVYRMGFGCTRAE 118

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISV 170
           ARQ V+H+  +VNG +VNI SY+ + GD IEV++  K    +  A ++ A R+  +++ V
Sbjct: 119 ARQMVSHKAFMVNGSTVNIPSYQVQPGDEIEVRESKKGHLRIAAALKIAATREECDWLEV 178

Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  N+   F  +P           +  NL+VE YS+
Sbjct: 179 DDKNLKGVFKSVPDRTD---LSAEINENLIVELYSK 211


>gi|323700831|ref|ZP_08112743.1| ribosomal protein S4 [Desulfovibrio sp. ND132]
 gi|323460763|gb|EGB16628.1| ribosomal protein S4 [Desulfovibrio desulfuricans ND132]
          Length = 208

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K K+ RR GE L+ +       K     R Y PG  G+ R  K S + +QLR 
Sbjct: 1   MARYTEAKCKLCRREGEKLFLKGDRCYTDKCAYEKRPYPPGQAGRLR-HKMSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR+ +K A+  +G   HNL+  LE RLD ++YR  F  +   ARQ
Sbjct: 60  KQKVRRMYG-ILEGQFRTYYKRAEGMKGVAGHNLLFLLERRLDNVIYRLGFANSRDQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NGR V+I S + K  DVIEV+++++++  + EA + +A R  PE++  +  
Sbjct: 119 LVLHGIFKLNGRRVSIPSMQVKAEDVIEVREEARKIPVINEAQEVIARRGCPEWLESDGA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N   T   +PS  +D+ +P  +   L+VE YS+
Sbjct: 179 NFKGTVKAMPSR-EDIQFP--INEQLIVELYSK 208


>gi|291296964|ref|YP_003508362.1| 30S ribosomal protein S4 [Meiothermus ruber DSM 1279]
 gi|290471923|gb|ADD29342.1| ribosomal protein S4 [Meiothermus ruber DSM 1279]
          Length = 205

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +      K+ R +G N+    K    ++ R Y PG HGQ+RK +PS F ++LR KQK+
Sbjct: 1   MGRYRGPIVKVARHLGVNIAETEKVQKYLDRRPYAPGQHGQKRKGRPSDFAVRLREKQKL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y  +SE +FR++F+EA R +G T    +  LESRLD +V+R     T   ARQFV H
Sbjct: 61  RFIYD-VSETQFRNLFEEASRKKGVTGTVFLQLLESRLDNVVFRMGIASTRRQARQFVRH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVA 177
            H+LVNG+ VNI  YR + GD I+V +K+K++  +++  +    R    ++  N D M  
Sbjct: 120 GHILVNGKRVNIPGYRVRPGDEIKVSEKAKKIDFIVQNVERFKNRKSFPWLEFNADTMTG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            F+R+P         + +   LV+EFYSR
Sbjct: 180 RFLRLPER---EMLSLPVNEQLVIEFYSR 205


>gi|169350323|ref|ZP_02867261.1| hypothetical protein CLOSPI_01084 [Clostridium spiroforme DSM 1552]
 gi|169293106|gb|EDS75239.1| hypothetical protein CLOSPI_01084 [Clostridium spiroforme DSM 1552]
          Length = 201

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/206 (41%), Positives = 119/206 (57%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G +     K  +N R Y PG HGQ+RK KP+ +GLQL  KQK++ 
Sbjct: 1   MSRYTGPQWKISRRLGFSTLENGKE-LNRRPYAPGQHGQKRK-KPTEYGLQLAEKQKVRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+F + FK A +  G   +N    LE RLD +VYR  F PT  AARQ VNH H
Sbjct: 59  MYG-VNEKQFHNTFKRAGKMSGIHGYNFFCLLEQRLDNVVYRLGFAPTRRAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
            LVNG   +I SY  K GDV+EVK+KSK LA +  + +      P ++ V+   M   F 
Sbjct: 118 FLVNGVKTDIPSYTVKVGDVVEVKEKSKNLAIIKASLE-NRVHTPAFVEVDETKMSGKFT 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +  +L+VE+Y+R
Sbjct: 177 RLPERSE---LNQEINESLIVEYYNR 199


>gi|307248854|ref|ZP_07530867.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307262278|ref|ZP_07543927.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306854781|gb|EFM86971.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306868041|gb|EFM99868.1| 30S ribosomal protein S4 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 204

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 12/209 (5%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY-----GPGLHGQRRKSKPSYFGLQLRAKQKM 58
              K K+ RR G +L+ +     + ++        PG HG  RK + S +G QLR KQK+
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHGA-RKPRLSDYGSQLREKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           ++ YG I E++FR+ + EA+R +G+T  NL+  LE RLD +VYR  F  T   ARQ V+H
Sbjct: 60  RRIYG-ILERQFRNYYTEANRLKGNTGENLLVLLEGRLDNVVYRMGFAATRAEARQLVSH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVA 177
           + ++VNGR VNI SY+    DV+ V++KSK+ A +  + +LA +R+ P ++ V+   M  
Sbjct: 119 KSIVVNGRVVNIPSYQVSVDDVVAVREKSKKQARIKASLELATQREKPTWLEVDATKMEG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            F R P           +  +L+VE YS+
Sbjct: 179 VFKRTPERSD---LSADINEHLIVELYSK 204


>gi|146319810|ref|YP_001199522.1| 30S ribosomal protein S4 [Streptococcus suis 05ZYH33]
 gi|146322003|ref|YP_001201714.1| 30S ribosomal protein S4 [Streptococcus suis 98HAH33]
 gi|223933695|ref|ZP_03625671.1| ribosomal protein S4 [Streptococcus suis 89/1591]
 gi|253752788|ref|YP_003025929.1| 30S ribosomal protein S4 [Streptococcus suis SC84]
 gi|253754613|ref|YP_003027754.1| 30S ribosomal protein S4 [Streptococcus suis P1/7]
 gi|253756546|ref|YP_003029686.1| 30S ribosomal protein S4 [Streptococcus suis BM407]
 gi|172045576|sp|A4W4M5|RS4_STRS2 RecName: Full=30S ribosomal protein S4
 gi|172045584|sp|A4VYD3|RS4_STRSY RecName: Full=30S ribosomal protein S4
 gi|145690616|gb|ABP91122.1| 30S ribosomal protein S4 [Streptococcus suis 05ZYH33]
 gi|145692809|gb|ABP93314.1| 30S ribosomal protein S4 [Streptococcus suis 98HAH33]
 gi|223897648|gb|EEF64033.1| ribosomal protein S4 [Streptococcus suis 89/1591]
 gi|251817077|emb|CAZ52729.1| 30S ribosomal protein S4 [Streptococcus suis SC84]
 gi|251819010|emb|CAZ56857.1| 30S ribosomal protein S4 [Streptococcus suis BM407]
 gi|251820859|emb|CAR47625.1| 30S ribosomal protein S4 [Streptococcus suis P1/7]
 gi|319759206|gb|ADV71148.1| 30S ribosomal protein S4 [Streptococcus suis JS14]
          Length = 203

 Score =  205 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSIKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|325843404|ref|ZP_08167962.1| ribosomal protein S4 [Turicibacter sp. HGF1]
 gi|325489326|gb|EGC91700.1| ribosomal protein S4 [Turicibacter sp. HGF1]
          Length = 199

 Score =  205 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      KI RR+G ++    K  +  R Y PG HGQ RK    Y GLQL+ KQK++ 
Sbjct: 1   MARYTGPSWKISRRLGYSILENGKE-LQKRPYAPGQHGQSRKKISEY-GLQLQEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  + +A +  G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 59  AYG-MTERQFRRTYDKAGKLAGKHGENFLYMLESRLDNLVYRLGLAATRRQARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY  K G  I +++KS  LA V  + + A    P++++ +   M  T+V
Sbjct: 118 ITVDGKRVDIPSYSVKPGQTISLREKSANLAVVKASLE-ATIHRPDFVTFDEATMTGTYV 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +  NL+VEFYSR
Sbjct: 177 RLPERSE---VFADIHENLIVEFYSR 199


>gi|91205656|ref|YP_538011.1| 30S ribosomal protein S4 [Rickettsia bellii RML369-C]
 gi|157826887|ref|YP_001495951.1| 30S ribosomal protein S4 [Rickettsia bellii OSU 85-389]
 gi|122425523|sp|Q1RI92|RS4_RICBR RecName: Full=30S ribosomal protein S4
 gi|172047819|sp|A8GVN7|RS4_RICB8 RecName: Full=30S ribosomal protein S4
 gi|91069200|gb|ABE04922.1| 30S ribosomal protein S4 [Rickettsia bellii RML369-C]
 gi|157802191|gb|ABV78914.1| 30S ribosomal protein S4 [Rickettsia bellii OSU 85-389]
          Length = 205

 Score =  205 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 95/206 (46%), Positives = 139/206 (67%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K   SK+K  RR+G +LWG  K   NTR+Y PG HG+    K S +GL L+AKQ++K 
Sbjct: 1   MTKIVRSKYKASRRLGVSLWGDGKDAFNTRNYRPGQHGRNTMVKTSDYGLHLKAKQRIKC 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+EK+FR+IF  A + +G+T  N I  LESRLD+IVYR    PTIF++RQ ++H H
Sbjct: 61  HYGRITEKQFRNIFGFAQKMKGNTGENFIGLLESRLDSIVYRMNIAPTIFSSRQLISHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+  +I S R KEGDVIE+K+ S+Q+  + E+     +  P+Y+S + D++   ++
Sbjct: 121 IKVNGKKADIASMRLKEGDVIEIKEASRQMGIIQESVSKQGQTTPDYVSFDVDSLSGKYL 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+ + DV YP   + +LVVE YSR
Sbjct: 181 RVPT-ISDVRYPFTPEVHLVVELYSR 205


>gi|184154963|ref|YP_001843303.1| 30S ribosomal protein S4 [Lactobacillus fermentum IFO 3956]
 gi|227514502|ref|ZP_03944551.1| ribosomal protein S4 [Lactobacillus fermentum ATCC 14931]
 gi|226699079|sp|B2GAZ1|RS4_LACF3 RecName: Full=30S ribosomal protein S4
 gi|183226307|dbj|BAG26823.1| 30S ribosomal protein S4 [Lactobacillus fermentum IFO 3956]
 gi|227087129|gb|EEI22441.1| ribosomal protein S4 [Lactobacillus fermentum ATCC 14931]
          Length = 201

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      ++ RR+G +L G  K  +  R Y PG HG  R+ K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWRLSRRLGVSLSGTGKE-LARRPYAPGDHGNDRRGKLSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + +  T   N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MTERQFSNLFVRAGKIKEGTHGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G VI V++KSK L  +  A + A    P Y+  + D +    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQVIAVREKSKNLDVIKGAVE-AVVARPAYVEFDADKLEGKL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P           +   L+VEFY++
Sbjct: 178 TRLPQR---EDMNADIDEALIVEFYNK 201


>gi|241068491|ref|XP_002408449.1| 30S ribosomal protein S4, putative [Ixodes scapularis]
 gi|215492437|gb|EEC02078.1| 30S ribosomal protein S4, putative [Ixodes scapularis]
          Length = 205

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 96/200 (48%), Positives = 135/200 (67%), Gaps = 1/200 (0%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K +YG ++
Sbjct: 7   SKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 66

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+FR+IF  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H+ +NG+
Sbjct: 67  EKQFRNIFVLAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 126

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
             +I S R KEGDVIEVK+  KQ++ + E+     +  P Y+S +  ++   ++R+P+ L
Sbjct: 127 KADIASIRLKEGDVIEVKESVKQISLIQESVSKQGQTTPGYLSFDVPSLTGKYLRVPA-L 185

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
            DVPYP   + +LV+E YSR
Sbjct: 186 SDVPYPFEAEVHLVIELYSR 205


>gi|195979012|ref|YP_002124256.1| 30S ribosomal protein S4 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225869452|ref|YP_002745400.1| 30S ribosomal protein S4 [Streptococcus equi subsp. zooepidemicus]
 gi|225871455|ref|YP_002747402.1| 30S ribosomal protein S4 [Streptococcus equi subsp. equi 4047]
 gi|226695078|sp|B4U0N4|RS4_STREM RecName: Full=30S ribosomal protein S4
 gi|254764611|sp|C0MB46|RS4_STRE4 RecName: Full=30S ribosomal protein S4
 gi|259495292|sp|C0MGP5|RS4_STRS7 RecName: Full=30S ribosomal protein S4
 gi|195975717|gb|ACG63243.1| 30S ribosomal protein S4 RpsD [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225700859|emb|CAW95600.1| 30S ribosomal protein S4 [Streptococcus equi subsp. equi 4047]
 gi|225702728|emb|CAX00869.1| 30S ribosomal protein S4 [Streptococcus equi subsp. zooepidemicus]
          Length = 203

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-MGEKQFRNLFVQATKIKEGTLGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I S+R + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSFRVEIGQVISVREKSMKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|289548515|ref|YP_003473503.1| ribosomal protein S4 [Thermocrinis albus DSM 14484]
 gi|289182132|gb|ADC89376.1| ribosomal protein S4 [Thermocrinis albus DSM 14484]
          Length = 209

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 8/211 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQ 56
           M +      +IDRR G  + GR  +   +  R++ PG HG+   R+ K + +G++L  KQ
Sbjct: 1   MGRYIGPWSRIDRRFGVVVSGRKSAARILAKRNFPPGQHGRVKGRRRKLTEYGIRLMEKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K  YG I EK+F+  F  A +S+G+T   L+  LE RLD +VYR     T   ARQFV
Sbjct: 61  KLKFLYGGIREKQFKKYFDMASKSKGNTGQVLLQLLERRLDNVVYRLGIACTRRQARQFV 120

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H H+LVNG+ VNI SY  + GDVIEVK  S+ +  ++E  +  + R VP ++ ++ +N 
Sbjct: 121 AHGHILVNGKKVNIPSYLVEPGDVIEVKPSSRDIPQIIENLENMDPRSVPPWLELDKENF 180

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +  P   KD+   + +    V+EFYSR
Sbjct: 181 RGKVLDYP---KDIQLEIPINLQYVIEFYSR 208


>gi|227892659|ref|ZP_04010464.1| ribosomal protein S4 [Lactobacillus ultunensis DSM 16047]
 gi|227865530|gb|EEJ72951.1| ribosomal protein S4 [Lactobacillus ultunensis DSM 16047]
          Length = 203

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  MYG-LNERQFRTLFARAGKIREGQHGVNFMILLERRLDNIVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G V+ +K+ SK L  V +A   A    P ++S + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVSVGQVVGLKENSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDESLVVEYYNK 201


>gi|17230229|ref|NP_486777.1| 30S ribosomal protein S4 [Nostoc sp. PCC 7120]
 gi|26399434|sp|Q8YTI0|RS4_ANASP RecName: Full=30S ribosomal protein S4
 gi|17131830|dbj|BAB74436.1| 30S ribosomal protein S4 [Nostoc sp. PCC 7120]
          Length = 202

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KS    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRKKRSEY-AIRLEEKQKLRL 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     + A R  G T   L+  LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-LTEKQLLRYVRRARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR VNI SY+C+ G+ I V+ K+     V    Q     ++P ++  + + +V   
Sbjct: 117 VTVNGRVVNIASYQCRPGEEIAVRDKAPSRKLVENNLQYPGLANLPSHLEFDKNKLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NSVIER---EWVALQVNELLVVEYYSR 200


>gi|322387048|ref|ZP_08060660.1| 30S ribosomal protein S4 [Streptococcus infantis ATCC 700779]
 gi|321142132|gb|EFX37625.1| 30S ribosomal protein S4 [Streptococcus infantis ATCC 700779]
          Length = 203

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G     N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VEFY++
Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201


>gi|15900029|ref|NP_344633.1| 30S ribosomal protein S4 [Streptococcus pneumoniae TIGR4]
 gi|15902122|ref|NP_357672.1| 30S ribosomal protein S4 [Streptococcus pneumoniae R6]
 gi|111656925|ref|ZP_01407747.1| hypothetical protein SpneT_02001834 [Streptococcus pneumoniae
           TIGR4]
 gi|116516581|ref|YP_815552.1| 30S ribosomal protein S4 [Streptococcus pneumoniae D39]
 gi|148985431|ref|ZP_01818636.1| ribosomal protein S4 [Streptococcus pneumoniae SP3-BS71]
 gi|148987815|ref|ZP_01819278.1| ribosomal protein S4 [Streptococcus pneumoniae SP6-BS73]
 gi|148993925|ref|ZP_01823308.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP9-BS68]
 gi|148996492|ref|ZP_01824210.1| ribosomal protein S4 [Streptococcus pneumoniae SP11-BS70]
 gi|149001831|ref|ZP_01826804.1| ribosomal protein S4 [Streptococcus pneumoniae SP14-BS69]
 gi|149007938|ref|ZP_01831516.1| ribosomal protein S4 [Streptococcus pneumoniae SP18-BS74]
 gi|149010947|ref|ZP_01832252.1| ribosomal protein S4 [Streptococcus pneumoniae SP19-BS75]
 gi|149017758|ref|ZP_01834217.1| ribosomal protein S4 [Streptococcus pneumoniae SP23-BS72]
 gi|168483611|ref|ZP_02708563.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1873-00]
 gi|168486664|ref|ZP_02711172.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1087-00]
 gi|168489443|ref|ZP_02713642.1| ribosomal protein S4 [Streptococcus pneumoniae SP195]
 gi|168492605|ref|ZP_02716748.1| ribosomal protein S4 [Streptococcus pneumoniae CDC0288-04]
 gi|168493783|ref|ZP_02717926.1| ribosomal protein S4 [Streptococcus pneumoniae CDC3059-06]
 gi|168577080|ref|ZP_02722909.1| ribosomal protein S4 [Streptococcus pneumoniae MLV-016]
 gi|169832653|ref|YP_001693607.1| 30S ribosomal protein S4 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683053|ref|YP_001834800.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CGSP14]
 gi|194398306|ref|YP_002036801.1| 30S ribosomal protein S4 [Streptococcus pneumoniae G54]
 gi|221231025|ref|YP_002510177.1| 30S ribosomal protein S4 [Streptococcus pneumoniae ATCC 700669]
 gi|225853713|ref|YP_002735225.1| 30S ribosomal protein S4 [Streptococcus pneumoniae JJA]
 gi|225855868|ref|YP_002737379.1| 30S ribosomal protein S4 [Streptococcus pneumoniae P1031]
 gi|225857950|ref|YP_002739460.1| 30S ribosomal protein S4 [Streptococcus pneumoniae 70585]
 gi|225860120|ref|YP_002741629.1| 30S ribosomal protein S4 [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649598|ref|ZP_04523850.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CCRI 1974]
 gi|237821538|ref|ZP_04597383.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CCRI 1974M2]
 gi|270291733|ref|ZP_06197949.1| ribosomal protein S4 [Streptococcus sp. M143]
 gi|289166998|ref|YP_003445265.1| 30S ribosomal protein S4 [Streptococcus mitis B6]
 gi|293364636|ref|ZP_06611357.1| 30S ribosomal protein S4 [Streptococcus oralis ATCC 35037]
 gi|298230010|ref|ZP_06963691.1| 30S ribosomal protein S4 [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254521|ref|ZP_06978107.1| 30S ribosomal protein S4 [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501873|ref|YP_003723813.1| 30S ribosomal protein S4 [Streptococcus pneumoniae TCH8431/19A]
 gi|303254819|ref|ZP_07340919.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS455]
 gi|303259128|ref|ZP_07345106.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP-BS293]
 gi|303260885|ref|ZP_07346834.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP14-BS292]
 gi|303263212|ref|ZP_07349135.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS397]
 gi|303267315|ref|ZP_07353176.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS457]
 gi|303269590|ref|ZP_07355351.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS458]
 gi|306826273|ref|ZP_07459607.1| 30S ribosomal protein S4 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306828536|ref|ZP_07461731.1| 30S ribosomal protein S4 [Streptococcus mitis ATCC 6249]
 gi|307066759|ref|YP_003875725.1| hypothetical protein SPAP_0129 [Streptococcus pneumoniae AP200]
 gi|307126310|ref|YP_003878341.1| 30S ribosomal protein S4 [Streptococcus pneumoniae 670-6B]
 gi|307702893|ref|ZP_07639841.1| ribosomal protein S4 [Streptococcus oralis ATCC 35037]
 gi|307705409|ref|ZP_07642267.1| ribosomal protein S4 [Streptococcus mitis SK597]
 gi|307707985|ref|ZP_07644460.1| ribosomal protein S4 [Streptococcus mitis NCTC 12261]
 gi|307710135|ref|ZP_07646579.1| ribosomal protein S4 [Streptococcus mitis SK564]
 gi|307711286|ref|ZP_07647707.1| ribosomal protein S4 [Streptococcus mitis SK321]
 gi|315612070|ref|ZP_07886987.1| 30S ribosomal protein S4 [Streptococcus sanguinis ATCC 49296]
 gi|322376030|ref|ZP_08050540.1| ribosomal protein S4 [Streptococcus sp. C300]
 gi|322378050|ref|ZP_08052537.1| ribosomal protein S4 [Streptococcus sp. M334]
 gi|322386473|ref|ZP_08060100.1| 30S ribosomal protein S4 [Streptococcus cristatus ATCC 51100]
 gi|331265518|ref|YP_004325148.1| 30S ribosomal protein S4 [Streptococcus oralis Uo5]
 gi|54039512|sp|P66566|RS4_STRR6 RecName: Full=30S ribosomal protein S4
 gi|54041964|sp|P66565|RS4_STRPN RecName: Full=30S ribosomal protein S4
 gi|122279509|sp|Q04MZ3|RS4_STRP2 RecName: Full=30S ribosomal protein S4
 gi|226695082|sp|B5E5W8|RS4_STRP4 RecName: Full=30S ribosomal protein S4
 gi|226695083|sp|B1I7Y6|RS4_STRPI RecName: Full=30S ribosomal protein S4
 gi|226695084|sp|B2IRG4|RS4_STRPS RecName: Full=30S ribosomal protein S4
 gi|254764612|sp|C1C9Y5|RS4_STRP7 RecName: Full=30S ribosomal protein S4
 gi|254764613|sp|B8ZJX3|RS4_STRPJ RecName: Full=30S ribosomal protein S4
 gi|254764615|sp|C1CBQ4|RS4_STRZJ RecName: Full=30S ribosomal protein S4
 gi|254764616|sp|C1CHZ1|RS4_STRZP RecName: Full=30S ribosomal protein S4
 gi|254764617|sp|C1CNV7|RS4_STRZT RecName: Full=30S ribosomal protein S4
 gi|14971552|gb|AAK74273.1| ribosomal protein S4 [Streptococcus pneumoniae TIGR4]
 gi|15457613|gb|AAK98882.1| 30S Ribosomal protein S4 [Streptococcus pneumoniae R6]
 gi|116077157|gb|ABJ54877.1| ribosomal protein S4 [Streptococcus pneumoniae D39]
 gi|147757067|gb|EDK64106.1| ribosomal protein S4 [Streptococcus pneumoniae SP11-BS70]
 gi|147760289|gb|EDK67278.1| ribosomal protein S4 [Streptococcus pneumoniae SP14-BS69]
 gi|147760561|gb|EDK67536.1| ribosomal protein S4 [Streptococcus pneumoniae SP18-BS74]
 gi|147764583|gb|EDK71513.1| ribosomal protein S4 [Streptococcus pneumoniae SP19-BS75]
 gi|147922389|gb|EDK73509.1| ribosomal protein S4 [Streptococcus pneumoniae SP3-BS71]
 gi|147926279|gb|EDK77352.1| ribosomal protein S4 [Streptococcus pneumoniae SP6-BS73]
 gi|147927632|gb|EDK78658.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP9-BS68]
 gi|147931322|gb|EDK82300.1| ribosomal protein S4 [Streptococcus pneumoniae SP23-BS72]
 gi|168995155|gb|ACA35767.1| ribosomal protein S4 [Streptococcus pneumoniae Hungary19A-6]
 gi|172043018|gb|EDT51064.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1873-00]
 gi|182628387|gb|ACB89335.1| 30S ribosomal protein S4 [Streptococcus pneumoniae CGSP14]
 gi|183570308|gb|EDT90836.1| ribosomal protein S4 [Streptococcus pneumoniae CDC1087-00]
 gi|183572140|gb|EDT92668.1| ribosomal protein S4 [Streptococcus pneumoniae SP195]
 gi|183573248|gb|EDT93776.1| ribosomal protein S4 [Streptococcus pneumoniae CDC0288-04]
 gi|183576019|gb|EDT96547.1| ribosomal protein S4 [Streptococcus pneumoniae CDC3059-06]
 gi|183577316|gb|EDT97844.1| ribosomal protein S4 [Streptococcus pneumoniae MLV-016]
 gi|194357973|gb|ACF56421.1| 30S ribosomal protein S4 [Streptococcus pneumoniae G54]
 gi|220673485|emb|CAR67956.1| 30S ribosomal protein S4 [Streptococcus pneumoniae ATCC 700669]
 gi|225720035|gb|ACO15889.1| ribosomal protein S4 [Streptococcus pneumoniae 70585]
 gi|225723223|gb|ACO19076.1| ribosomal protein S4 [Streptococcus pneumoniae JJA]
 gi|225724355|gb|ACO20207.1| ribosomal protein S4 [Streptococcus pneumoniae P1031]
 gi|225727282|gb|ACO23133.1| ribosomal protein S4 [Streptococcus pneumoniae Taiwan19F-14]
 gi|270279818|gb|EFA25659.1| ribosomal protein S4 [Streptococcus sp. M143]
 gi|288906563|emb|CBJ21396.1| 30S ribosomal protein S4 [Streptococcus mitis B6]
 gi|291316894|gb|EFE57326.1| 30S ribosomal protein S4 [Streptococcus oralis ATCC 35037]
 gi|298237468|gb|ADI68599.1| 30S ribosomal protein S4 [Streptococcus pneumoniae TCH8431/19A]
 gi|301793388|emb|CBW35753.1| 30S ribosomal protein S4 [Streptococcus pneumoniae INV104]
 gi|301799257|emb|CBW31777.1| 30S ribosomal protein S4 [Streptococcus pneumoniae OXC141]
 gi|301801046|emb|CBW33713.1| 30S ribosomal protein S4 [Streptococcus pneumoniae INV200]
 gi|302598256|gb|EFL65302.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS455]
 gi|302637722|gb|EFL68208.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP14-BS292]
 gi|302639546|gb|EFL70003.1| 30S ribosomal protein S4 [Streptococcus pneumoniae SP-BS293]
 gi|302640864|gb|EFL71250.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS458]
 gi|302643166|gb|EFL73452.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS457]
 gi|302646985|gb|EFL77209.1| 30S ribosomal protein S4 [Streptococcus pneumoniae BS397]
 gi|304429335|gb|EFM32420.1| 30S ribosomal protein S4 [Streptococcus mitis ATCC 6249]
 gi|304431549|gb|EFM34531.1| 30S ribosomal protein S4 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306408296|gb|ADM83723.1| hypothetical protein SPAP_0129 [Streptococcus pneumoniae AP200]
 gi|306483372|gb|ADM90241.1| ribosomal protein S4 [Streptococcus pneumoniae 670-6B]
 gi|307616050|gb|EFN95248.1| ribosomal protein S4 [Streptococcus mitis NCTC 12261]
 gi|307616937|gb|EFN96116.1| ribosomal protein S4 [Streptococcus mitis SK321]
 gi|307619115|gb|EFN98247.1| ribosomal protein S4 [Streptococcus mitis SK564]
 gi|307621040|gb|EFO00119.1| ribosomal protein S4 [Streptococcus mitis SK597]
 gi|307623573|gb|EFO02562.1| ribosomal protein S4 [Streptococcus oralis ATCC 35037]
 gi|315315872|gb|EFU63907.1| 30S ribosomal protein S4 [Streptococcus sanguinis ATCC 49296]
 gi|321269392|gb|EFX52325.1| 30S ribosomal protein S4 [Streptococcus cristatus ATCC 51100]
 gi|321278980|gb|EFX56023.1| ribosomal protein S4 [Streptococcus sp. C300]
 gi|321281032|gb|EFX58045.1| ribosomal protein S4 [Streptococcus sp. M334]
 gi|326682190|emb|CBY99806.1| 30S ribosomal protein S4 [Streptococcus oralis Uo5]
 gi|327390493|gb|EGE88833.1| ribosomal protein S4 [Streptococcus pneumoniae GA04375]
 gi|332075747|gb|EGI86214.1| ribosomal protein S4 [Streptococcus pneumoniae GA17570]
 gi|332076539|gb|EGI87001.1| ribosomal protein S4 [Streptococcus pneumoniae GA17545]
 gi|332077392|gb|EGI87853.1| ribosomal protein S4 [Streptococcus pneumoniae GA41301]
          Length = 203

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G     N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|170758349|ref|YP_001788793.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree]
 gi|169405338|gb|ACA53749.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree]
          Length = 206

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 112/212 (52%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     R Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MARYTGATCRLCRREGLKLFLKGDRCYTDKCAFARRGYAPGQHGQSRK-KVSNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG I E++FR  ++EADR RG T  NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKAKRIYG-ILERQFRGYYEEADRRRGITGENLLRLLEMRLDNVVYRLGYGNSRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY+    DVI V  KSK        ++   + +P ++S N + 
Sbjct: 119 LVTHGHFLVNGKKVDIPSYQVSANDVITVCDKSKATEKFKTFAENP-KTLPAWLSGNVEG 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 R P+        V +   L+VE YS+
Sbjct: 178 FEGKVERQPAR---EDMDVPVNETLIVELYSK 206


>gi|171462904|ref|YP_001797017.1| ribosomal protein S4 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226699102|sp|B1XSS6|RS4_POLNS RecName: Full=30S ribosomal protein S4
 gi|171192442|gb|ACB43403.1| ribosomal protein S4 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 207

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +  +  ++ +      PG  G+   S+ S +G QLR KQ
Sbjct: 1   MARYLGPKAKLARREGTDLFLKSARRALSDKCRLDNKPGQDGRTSGSRTSDYGNQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + E++FR  F EA+R +G+T   L+  LESRLD +VYR  F  T   ARQ V
Sbjct: 61  KVKRIYGVL-ERQFRRYFAEAERRKGNTGETLLQLLESRLDNVVYRMGFGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +H  +L+NG  VNI S + K GDV+ +++K+K+ A + E+  L  +     ++SV+   +
Sbjct: 120 SHCAILLNGNPVNIPSIQVKPGDVVAIREKAKKQARITESLNLVGQMAAVTWVSVDVAKL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF ++P           +  +L+VE YSR
Sbjct: 180 EGTFKQVPDR---EDISGEINESLIVELYSR 207


>gi|67004474|gb|AAY61400.1| 30S ribosomal protein S4 [Rickettsia felis URRWXCal2]
          Length = 221

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 96/200 (48%), Positives = 134/200 (67%), Gaps = 1/200 (0%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K +YG ++
Sbjct: 23  SKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 82

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+FR+IF  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H+ +NG+
Sbjct: 83  EKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 142

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
             +I S R KEGDVIEVK+  KQ+  + E+     +  P Y+S +  ++   ++R+P+ L
Sbjct: 143 KADIASIRLKEGDVIEVKESVKQIPLIQESVSKQAQTTPGYLSFDVPSLTGKYLRVPA-L 201

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
            DVPYP   + +LV+E YSR
Sbjct: 202 SDVPYPFEAEVHLVIELYSR 221


>gi|157150371|ref|YP_001451346.1| 30S ribosomal protein S4 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262283690|ref|ZP_06061455.1| ribosomal protein S4 [Streptococcus sp. 2_1_36FAA]
 gi|172045598|sp|A8AZY6|RS4_STRGC RecName: Full=30S ribosomal protein S4
 gi|157075165|gb|ABV09848.1| ribosomal protein S4 [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|262260747|gb|EEY79448.1| ribosomal protein S4 [Streptococcus sp. 2_1_36FAA]
          Length = 203

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +      N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|312865798|ref|ZP_07726020.1| ribosomal protein S4 [Streptococcus downei F0415]
 gi|311098673|gb|EFQ56895.1| ribosomal protein S4 [Streptococcus downei F0415]
          Length = 203

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRLGLSLTGTGKE-LARRNYVPGQHGPNHRGKLSEYGMQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T  +N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-LGEKQFRNLFVQATKIKEGTLGYNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A      ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVE-ATVGRSAFVSFDEEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VEFY++
Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201


>gi|193214825|ref|YP_001996024.1| 30S ribosomal protein S4 [Chloroherpeton thalassium ATCC 35110]
 gi|226697824|sp|B3QYE9|RS4_CHLT3 RecName: Full=30S ribosomal protein S4
 gi|193088302|gb|ACF13577.1| ribosomal protein S4 [Chloroherpeton thalassium ATCC 35110]
          Length = 203

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  K+ RR+G  L  + +  +  R+Y PG HGQ RK K S + LQLR KQKMK 
Sbjct: 1   MARFRGSITKVSRRLGVALAPKAEKYLGRRAYAPGQHGQSRKGKISEYALQLREKQKMKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +K+A   RG T  NL+  LE R D +V+RA F P+   ARQ V+H H
Sbjct: 61  IYGVL-ERQFRNYYKKAVSQRGVTGENLVKLLECRFDNVVFRAGFSPSRAGARQLVSHCH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           + +NG  VNI SY+ K GDVI+ ++KS+ + +V  +     +  +P++I V+  NM A F
Sbjct: 120 LRINGNKVNIPSYQVKPGDVIDFREKSRNMDAVRNSLNKTPDSRIPQWIQVDKANMKAVF 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P               LVVE YS+
Sbjct: 180 LNVPERAD---IQEPYNEQLVVELYSK 203


>gi|85858172|ref|YP_460374.1| 30S ribosomal protein S4P [Syntrophus aciditrophicus SB]
 gi|123515693|sp|Q2LQD0|RS4_SYNAS RecName: Full=30S ribosomal protein S4
 gi|85721263|gb|ABC76206.1| SSU ribosomal protein S4P [Syntrophus aciditrophicus SB]
          Length = 209

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++ + S  ++ RR G  L+ +       K     R Y PG HGQ R+ +PS +G+QLR 
Sbjct: 1   MARYKESACRLCRREGLKLFLKGDRCYGEKCAFERRGYAPGEHGQLRRKQPSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR  F++AD+ +G T  NL+ +LE RLD +VYR  F  +   ARQ
Sbjct: 61  KQKLKRMYG-LLEKQFRGYFEKADKKKGITGTNLLLYLERRLDNMVYRLGFANSRNEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H LVNGR VNI S+    GD IEV ++ ++   ++EA + +  R +P+++ +  +
Sbjct: 120 LVRHNHFLVNGRKVNIPSFLVNIGDFIEVTEEGRKNNKIIEAMETIVRRGIPQWLELEQE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N       +P+  +     + +Q  LVVE YS+
Sbjct: 180 NFKGKVKMLPTREE---LTMPIQEQLVVELYSK 209


>gi|269469225|gb|EEZ80756.1| ribosomal protein S4 [uncultured SUP05 cluster bacterium]
          Length = 208

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 124/212 (58%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQR-RKSKPSYFGLQLRAK 55
           M++      K+ RR G +L+ +     ++++      PG+HG   R+ K + +GLQLR K
Sbjct: 1   MARYTGPTCKLARREGTDLFLKSGIRSLDSKCKITQLPGMHGANARRQKGTEYGLQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG I EK+FR  +K+A + +G T  NL+S LE RLD +VYR  F  T   ARQ 
Sbjct: 61  QKVRRIYG-ILEKQFRLYYKKASQKKGSTGDNLLSLLECRLDNVVYRMGFGATRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN 174
           V+H+ +LVNG  VNI SY+    D I V++KSK+ + +  A +LAE+    E++ V++  
Sbjct: 120 VSHKSILVNGSIVNIPSYQVSANDEISVREKSKKQSRIQLAVELAEQSGQVEWVDVDNKA 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F  +P+          ++ +L+VE YS+
Sbjct: 180 LKGVFKNVPARDD---LSSDIEEHLIVELYSK 208


>gi|227535269|ref|ZP_03965318.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187153|gb|EEI67220.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 239

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G +L G  K  +  R Y PG HG   + K S +G QLR KQK++ 
Sbjct: 37  MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 95

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F  A + +  T   N +  LE+RLD +V+R     +   ARQ VNH 
Sbjct: 96  MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 154

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI ++++S+ LA V EA +      P Y++ +      + 
Sbjct: 155 HITVDGKRVDIPSYEVEPGQVIALRERSQNLAIVNEAIE-NTVSRPAYVTFDDTKKTGSL 213

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +  P    +  +LVVE+Y
Sbjct: 214 VRLPERGELEP---EVDESLVVEYY 235


>gi|229916421|ref|YP_002885067.1| ribosomal protein S4 [Exiguobacterium sp. AT1b]
 gi|259495280|sp|C4L4A0|RS4_EXISA RecName: Full=30S ribosomal protein S4
 gi|229467850|gb|ACQ69622.1| ribosomal protein S4 [Exiguobacterium sp. AT1b]
          Length = 199

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L    K  +  R Y PG HG  RK    Y  LQL+AKQ ++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSETGKE-LAKRPYAPGQHGNGRKKISEYD-LQLQAKQALRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+FR IF +A +  G    N +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 59  MYG-VNEKQFRRIFNDAGKMPGIHGENFMFLLESRLDNLVYRFGLARTRRGARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V+I SYR K G VI V++KSK + ++ EA ++A     +++S + + +  TFV
Sbjct: 118 ITVDGSRVDIASYRVKPGQVIAVREKSKNVKAIAEALEVAPATK-DFVSFDAEKLEGTFV 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       ++  L+VE+YSR
Sbjct: 177 RLPERAE---LNDQIKEQLIVEYYSR 199


>gi|327325138|gb|EGE66944.1| ribosomal protein S4 [Propionibacterium acnes HL096PA3]
          Length = 201

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  KS    R Y PG+HG+ R     Y  LQLR KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRSRTKDSEY-SLQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EADR++G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR    D+I+V++KSK L  ++ A +  E RDVP ++ V  +      
Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + V   + +    +VE YS+
Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201


>gi|227431364|ref|ZP_03913416.1| ribosomal protein S4 [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352874|gb|EEJ43048.1| ribosomal protein S4 [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 203

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 74/205 (36%), Positives = 123/205 (60%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K +I RR+G +L G  K  ++ R+Y PG HG  R++K S +G+QLR KQK++ 
Sbjct: 1   MSRYTGPKWRISRRLGVSLSGTGKE-LSRRAYAPGDHGAGRRAKISEYGMQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F +A + R  T   N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 60  TYG-LTERQFKALFNKAGKIRKGTHGTNFMISLEQRLDSVVYRLGLATTRQQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  + G V+ V++KSK +  +  A +      P+++S++ + +  + 
Sbjct: 119 HILVDGKRVDIPSYSVQPGQVVSVREKSKNILPIQTAIESVVAR-PQFVSLDTEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +       +   L+VE+Y
Sbjct: 178 VRLPEREE---LDADINEALIVEYY 199


>gi|152112269|sp|A3CRA2|RS4_STRSV RecName: Full=30S ribosomal protein S4
 gi|324991900|gb|EGC23823.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK405]
 gi|324996210|gb|EGC28120.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK678]
 gi|327458525|gb|EGF04875.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1]
 gi|327490386|gb|EGF22172.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1058]
          Length = 203

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +      N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVTPGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   L+VEFY++
Sbjct: 178 TRLPERDE---INPEINEALIVEFYNK 201


>gi|126697668|ref|YP_001086565.1| 30S ribosomal protein S4 [Clostridium difficile 630]
 gi|254973759|ref|ZP_05270231.1| 30S ribosomal protein S4 [Clostridium difficile QCD-66c26]
 gi|255091149|ref|ZP_05320627.1| 30S ribosomal protein S4 [Clostridium difficile CIP 107932]
 gi|255099260|ref|ZP_05328237.1| 30S ribosomal protein S4 [Clostridium difficile QCD-63q42]
 gi|255305043|ref|ZP_05349215.1| 30S ribosomal protein S4 [Clostridium difficile ATCC 43255]
 gi|255312803|ref|ZP_05354386.1| 30S ribosomal protein S4 [Clostridium difficile QCD-76w55]
 gi|255515562|ref|ZP_05383238.1| 30S ribosomal protein S4 [Clostridium difficile QCD-97b34]
 gi|255648657|ref|ZP_05395559.1| 30S ribosomal protein S4 [Clostridium difficile QCD-37x79]
 gi|255654190|ref|ZP_05399599.1| 30S ribosomal protein S4 [Clostridium difficile QCD-23m63]
 gi|260681874|ref|YP_003213159.1| 30S ribosomal protein S4 [Clostridium difficile CD196]
 gi|260685472|ref|YP_003216605.1| 30S ribosomal protein S4 [Clostridium difficile R20291]
 gi|296449771|ref|ZP_06891540.1| 30S ribosomal protein S4 [Clostridium difficile NAP08]
 gi|296877835|ref|ZP_06901857.1| 30S ribosomal protein S4 [Clostridium difficile NAP07]
 gi|122974220|sp|Q18CI6|RS4_CLOD6 RecName: Full=30S ribosomal protein S4
 gi|115249105|emb|CAJ66916.1| 30S ribosomal protein S4 [Clostridium difficile]
 gi|260208037|emb|CBA60237.1| 30S ribosomal protein S4 [Clostridium difficile CD196]
 gi|260211488|emb|CBE01627.1| 30S ribosomal protein S4 [Clostridium difficile R20291]
 gi|296261369|gb|EFH08195.1| 30S ribosomal protein S4 [Clostridium difficile NAP08]
 gi|296431135|gb|EFH16960.1| 30S ribosomal protein S4 [Clostridium difficile NAP07]
          Length = 207

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR G  L+ +       K  +  R+Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRK-KVSNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR++++ A+   G    NL+S LE RLD +VYR     +   ARQ
Sbjct: 60  KQKVKRIYGVL-ETQFRNLYERAENMPGKAGENLLSLLERRLDNVVYRMGLASSRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  +NG  V+I S   K GDVIEVK+KS+  A      ++  R  P+++  N + 
Sbjct: 119 LVTHGHFTLNGNKVDIPSLIVKVGDVIEVKEKSRSSAKFKNLVEVNSRIAPKWLEANVEG 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           M A  V +P+        + +  +L++E YS+
Sbjct: 179 MTAKVVGVPTR---EDIDLEIAEHLIIELYSK 207


>gi|258622736|ref|ZP_05717754.1| 30S ribosomal protein S4 [Vibrio mimicus VM573]
 gi|262166593|ref|ZP_06034330.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus VM223]
 gi|258584924|gb|EEW09655.1| 30S ribosomal protein S4 [Vibrio mimicus VM573]
 gi|262026309|gb|EEY44977.1| SSU ribosomal protein S4p (S9e) [Vibrio mimicus VM223]
          Length = 202

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 122/207 (58%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  IYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNG+ VN+ S+     DV+ +++K+K+ + +  A ++AE R+ P +I V+ + M  TF
Sbjct: 119 ILVNGKVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDVNTMEGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P           +   L+VE YS+
Sbjct: 179 KRLPERSD---LSADINEQLIVELYSK 202


>gi|71905986|ref|YP_283573.1| 30S ribosomal protein S4 [Dechloromonas aromatica RCB]
 gi|90101686|sp|Q47J78|RS4_DECAR RecName: Full=30S ribosomal protein S4
 gi|71845607|gb|AAZ45103.1| SSU ribosomal protein S4P [Dechloromonas aromatica RCB]
          Length = 209

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  RSY PG HGQ+  ++ S +G+ LRA
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRSYAPGQHGQKSGARLSDYGVHLRA 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR  F EADR +G T  NL+  LE+RLD++ YR  F  +   +RQ
Sbjct: 61  KQKIRRVYGVL-EGQFRKTFAEADRRKGQTGENLLQLLEARLDSVAYRMGFGASRSESRQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  +LVNG+ VNI S+  K GDV+++  +++       A + AE R  PE+ISV+  
Sbjct: 120 VVRHNGILVNGKRVNIPSFIVKPGDVVQLTDRARASLRCKAALEAAESRGFPEWISVDVK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               TF  +P   +    P  +   LV+E YS+
Sbjct: 180 EGKGTFKAMPQRSE---LPATLNEGLVIELYSK 209


>gi|24380465|ref|NP_722420.1| 30S ribosomal protein S4 [Streptococcus mutans UA159]
 gi|290581395|ref|YP_003485787.1| 30S ribosomal protein S4 [Streptococcus mutans NN2025]
 gi|26399366|sp|P59133|RS4_STRMU RecName: Full=30S ribosomal protein S4
 gi|24378494|gb|AAN59726.1|AE015034_7 30S ribosomal protein S4 [Streptococcus mutans UA159]
 gi|254998294|dbj|BAH88895.1| 30S ribosomal protein S4 [Streptococcus mutans NN2025]
          Length = 203

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKKSRRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G    +N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKGGILGYNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA +      P ++S + D +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVESV-VGRPAFVSFDADKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|296105004|ref|YP_003615150.1| 30S ribosomal protein S4 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059463|gb|ADF64201.1| 30S ribosomal protein S4 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 202

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 125/207 (60%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   +RQ V+H+ 
Sbjct: 60  IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           ++VNGR VNI SY+ K  DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M  TF
Sbjct: 119 IMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P           +  +L+VE YS+
Sbjct: 179 KRQPERSD---LSADINEHLIVELYSK 202


>gi|317153933|ref|YP_004121981.1| 30S ribosomal protein S4 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944184|gb|ADU63235.1| ribosomal protein S4 [Desulfovibrio aespoeensis Aspo-2]
          Length = 208

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K K+ RR G  L+ +       K     R Y PG H  R + K S + +QLR 
Sbjct: 1   MARYTEAKCKLCRREGTKLFLKGDRCYTDKCAYEKRPYPPG-HAGRMRHKMSDYAVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I E +FR+ ++ AD  +G T HNL+  LE RLD +++R  F  +   ARQ
Sbjct: 60  KQKVRRMYG-ILEGQFRAYYERADGMKGVTGHNLLMLLERRLDNVIFRLGFANSRDQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NGR VN+ S + K  DVI+V+++++++  + EA + +A R  P+++  +  
Sbjct: 119 LVRHGIFQLNGRRVNVPSMQVKAEDVIQVREEARKIPVINEAQEVIARRGCPDWLESDGA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N   T   +PS          +   L+VE YS+
Sbjct: 179 NFKGTVKAMPSRDN---IQFPINEQLIVELYSK 208


>gi|146329810|ref|YP_001210128.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A]
 gi|172047329|sp|A5EX95|RS4_DICNV RecName: Full=30S ribosomal protein S4
 gi|146233280|gb|ABQ14258.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A]
          Length = 206

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K ++ RR G +L  +    P  ++      PG HG  R+ + S +G QLR KQ
Sbjct: 1   MARYIGPKCRLARREGVDLELKSGVRPSESKCNMNAAPGQHG-GRRGRLSDYGGQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + E++FR+ +K+A + +G T  NL+  LE RLD +VYR  +  T   ARQ V
Sbjct: 60  KLKRTYGVL-ERQFRNYYKKAVQQKGSTGENLLILLEQRLDNVVYRMGYGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H  + VNG+ V I SY+ +  D++ V+++S++   +  A ++A +R   ++I V+   M
Sbjct: 119 SHGAIEVNGQRVTIASYQVQAEDIVSVREQSRKQIRIQSALEIAKQRGFVDWIEVDAAKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P     +     +  +LVVE YS+
Sbjct: 179 SGQFKRVPER---IDLSADINESLVVELYSK 206


>gi|254416392|ref|ZP_05030145.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420]
 gi|196176830|gb|EDX71841.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420]
          Length = 202

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+G+      KSP   RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVVRRLGDLPGLTRKSP--RRSYPPGQHGQARRKRSEY-AIRLEEKQKLRY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     ++A R+ G T   L+  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VTEKQLLRYVRKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V+VNGR VNI SY+C+ GDVI VK   +    V +  +     ++P ++  +        
Sbjct: 117 VMVNGREVNIASYQCRPGDVIMVKDNERSRRLVEKNLEYPGLANLPSHLEFDKKTFTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVEFYSR
Sbjct: 177 NGMIER---EWVALQINELLVVEFYSR 200


>gi|82701924|ref|YP_411490.1| 30S ribosomal protein S4 [Nitrosospira multiformis ATCC 25196]
 gi|90101698|sp|Q2YAX3|RS4_NITMU RecName: Full=30S ribosomal protein S4
 gi|82409989|gb|ABB74098.1| SSU ribosomal protein S4P [Nitrosospira multiformis ATCC 25196]
          Length = 208

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  R+Y PG HGQ +  + S +G+QLR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRNYAPGQHGQ-KSGRLSDYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++FR+ ++ A+R RG T  NL+  LE RLDT+ YR  F  +   ARQ
Sbjct: 60  KQKLRRIYGVL-ERQFRNGYELAERQRGVTGENLLQLLECRLDTVSYRMGFGASRSEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H  +LVNGR +NI SY+ K GDVIEV +K+K    +  + + AE R  PE++ V+  
Sbjct: 119 IVRHNGILVNGRRINIPSYQVKPGDVIEVAEKAKNHLRIKASVEAAEQRHFPEWLEVDTK 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M  TF   P        P  +  +LV+E YS+
Sbjct: 179 AMKGTFKNKPERSD---LPSSINESLVIELYSK 208


>gi|302871525|ref|YP_003840161.1| ribosomal protein S4 [Caldicellulosiruptor obsidiansis OB47]
 gi|312127253|ref|YP_003992127.1| 30S ribosomal protein S4 [Caldicellulosiruptor hydrothermalis 108]
 gi|302574384|gb|ADL42175.1| ribosomal protein S4 [Caldicellulosiruptor obsidiansis OB47]
 gi|311777272|gb|ADQ06758.1| ribosomal protein S4 [Caldicellulosiruptor hydrothermalis 108]
          Length = 208

 Score =  204 bits (520), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MSK      ++ RR G  L+ +       K     R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H H  VNGR+VNI SY  K GDVIEV ++SK     +E  +  A++  P+++  + +
Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLEKDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   + +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208


>gi|116494737|ref|YP_806471.1| ribosomal protein S4 [Lactobacillus casei ATCC 334]
 gi|191638248|ref|YP_001987414.1| 30S ribosomal protein S4 [Lactobacillus casei BL23]
 gi|239631669|ref|ZP_04674700.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066295|ref|YP_003788318.1| 30S ribosomal protein L4 [Lactobacillus casei str. Zhang]
 gi|122263845|sp|Q039U3|RS4_LACC3 RecName: Full=30S ribosomal protein S4
 gi|226699078|sp|B3WDV5|RS4_LACCB RecName: Full=30S ribosomal protein S4
 gi|116104887|gb|ABJ70029.1| SSU ribosomal protein S4P [Lactobacillus casei ATCC 334]
 gi|190712550|emb|CAQ66556.1| 30S ribosomal protein S4 [Lactobacillus casei BL23]
 gi|239526134|gb|EEQ65135.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438702|gb|ADK18468.1| Ribosomal protein S4 [Lactobacillus casei str. Zhang]
 gi|327382278|gb|AEA53754.1| 30S ribosomal protein S4 [Lactobacillus casei LC2W]
 gi|327385474|gb|AEA56948.1| 30S ribosomal protein S4 [Lactobacillus casei BD-II]
          Length = 203

 Score =  204 bits (520), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G +L G  K  +  R Y PG HG   + K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F  A + +  T   N +  LE+RLD +V+R     +   ARQ VNH 
Sbjct: 60  MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI ++++S+ LA V EA +      P Y++ +      + 
Sbjct: 119 HITVDGKRVDIPSYEVEPGQVIALRERSQNLAIVNEAIE-NTVSRPAYVTFDDTKKTGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +  P    +  +LVVE+Y
Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199


>gi|148543735|ref|YP_001271105.1| 30S ribosomal protein S4 [Lactobacillus reuteri DSM 20016]
 gi|194468296|ref|ZP_03074282.1| ribosomal protein S4 [Lactobacillus reuteri 100-23]
 gi|227363285|ref|ZP_03847417.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM2-3]
 gi|227544238|ref|ZP_03974287.1| 30S ribosomal protein S4 [Lactobacillus reuteri CF48-3A]
 gi|300908234|ref|ZP_07125700.1| 30S ribosomal protein S4 [Lactobacillus reuteri SD2112]
 gi|325682107|ref|ZP_08161625.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM4-1A]
 gi|172048234|sp|A5VIU4|RS4_LACRD RecName: Full=30S ribosomal protein S4
 gi|148530769|gb|ABQ82768.1| SSU ribosomal protein S4P [Lactobacillus reuteri DSM 20016]
 gi|194453149|gb|EDX42047.1| ribosomal protein S4 [Lactobacillus reuteri 100-23]
 gi|227071741|gb|EEI10032.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM2-3]
 gi|227185791|gb|EEI65862.1| 30S ribosomal protein S4 [Lactobacillus reuteri CF48-3A]
 gi|300894661|gb|EFK88017.1| 30S ribosomal protein S4 [Lactobacillus reuteri SD2112]
 gi|324978751|gb|EGC15700.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM4-1A]
          Length = 201

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      ++ RR+G +L G  K  +  R+Y PG HG+ R+ K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWRVSRRLGVSLSGTGKE-LARRAYAPGDHGRDRRGKLSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + +  T   N ++ LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MTERQFSNLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G +I V+ KSK L  +  A + A    P Y+  + D +    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQIIAVRDKSKNLDIIKNAVE-AVVSRPSYVDFDADKLEGKL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP+          +   L+VEFY++
Sbjct: 178 NRIPAR---EDMNADIDEALIVEFYNK 201


>gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202]
 gi|282855171|ref|ZP_06264503.1| ribosomal protein S4 [Propionibacterium acnes J139]
 gi|289424812|ref|ZP_06426594.1| ribosomal protein S4 [Propionibacterium acnes SK187]
 gi|289427659|ref|ZP_06429371.1| ribosomal protein S4 [Propionibacterium acnes J165]
 gi|295131353|ref|YP_003582016.1| ribosomal protein S4 [Propionibacterium acnes SK137]
 gi|61215507|sp|Q6A6R0|RS4_PROAC RecName: Full=30S ribosomal protein S4
 gi|50840886|gb|AAT83553.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202]
 gi|282581759|gb|EFB87144.1| ribosomal protein S4 [Propionibacterium acnes J139]
 gi|289154775|gb|EFD03458.1| ribosomal protein S4 [Propionibacterium acnes SK187]
 gi|289159150|gb|EFD07342.1| ribosomal protein S4 [Propionibacterium acnes J165]
 gi|291375309|gb|ADD99163.1| ribosomal protein S4 [Propionibacterium acnes SK137]
 gi|313763204|gb|EFS34568.1| ribosomal protein S4 [Propionibacterium acnes HL013PA1]
 gi|313773119|gb|EFS39085.1| ribosomal protein S4 [Propionibacterium acnes HL074PA1]
 gi|313793291|gb|EFS41349.1| ribosomal protein S4 [Propionibacterium acnes HL110PA1]
 gi|313801065|gb|EFS42333.1| ribosomal protein S4 [Propionibacterium acnes HL110PA2]
 gi|313808806|gb|EFS47260.1| ribosomal protein S4 [Propionibacterium acnes HL087PA2]
 gi|313810400|gb|EFS48114.1| ribosomal protein S4 [Propionibacterium acnes HL083PA1]
 gi|313812264|gb|EFS49978.1| ribosomal protein S4 [Propionibacterium acnes HL025PA1]
 gi|313816541|gb|EFS54255.1| ribosomal protein S4 [Propionibacterium acnes HL059PA1]
 gi|313817985|gb|EFS55699.1| ribosomal protein S4 [Propionibacterium acnes HL046PA2]
 gi|313819898|gb|EFS57612.1| ribosomal protein S4 [Propionibacterium acnes HL036PA1]
 gi|313823389|gb|EFS61103.1| ribosomal protein S4 [Propionibacterium acnes HL036PA2]
 gi|313824860|gb|EFS62574.1| ribosomal protein S4 [Propionibacterium acnes HL063PA1]
 gi|313828398|gb|EFS66112.1| ribosomal protein S4 [Propionibacterium acnes HL063PA2]
 gi|313830102|gb|EFS67816.1| ribosomal protein S4 [Propionibacterium acnes HL007PA1]
 gi|313832626|gb|EFS70340.1| ribosomal protein S4 [Propionibacterium acnes HL056PA1]
 gi|313837982|gb|EFS75696.1| ribosomal protein S4 [Propionibacterium acnes HL086PA1]
 gi|314914365|gb|EFS78196.1| ribosomal protein S4 [Propionibacterium acnes HL005PA4]
 gi|314917685|gb|EFS81516.1| ribosomal protein S4 [Propionibacterium acnes HL050PA1]
 gi|314919583|gb|EFS83414.1| ribosomal protein S4 [Propionibacterium acnes HL050PA3]
 gi|314925755|gb|EFS89586.1| ribosomal protein S4 [Propionibacterium acnes HL036PA3]
 gi|314930173|gb|EFS94004.1| ribosomal protein S4 [Propionibacterium acnes HL067PA1]
 gi|314957154|gb|EFT01258.1| ribosomal protein S4 [Propionibacterium acnes HL027PA1]
 gi|314957795|gb|EFT01898.1| ribosomal protein S4 [Propionibacterium acnes HL002PA1]
 gi|314960835|gb|EFT04936.1| ribosomal protein S4 [Propionibacterium acnes HL002PA2]
 gi|314963509|gb|EFT07609.1| ribosomal protein S4 [Propionibacterium acnes HL082PA1]
 gi|314964877|gb|EFT08976.1| ribosomal protein S4 [Propionibacterium acnes HL082PA2]
 gi|314969908|gb|EFT14006.1| ribosomal protein S4 [Propionibacterium acnes HL037PA1]
 gi|314973049|gb|EFT17145.1| ribosomal protein S4 [Propionibacterium acnes HL053PA1]
 gi|314975545|gb|EFT19640.1| ribosomal protein S4 [Propionibacterium acnes HL045PA1]
 gi|314979766|gb|EFT23860.1| ribosomal protein S4 [Propionibacterium acnes HL072PA2]
 gi|314984828|gb|EFT28920.1| ribosomal protein S4 [Propionibacterium acnes HL005PA1]
 gi|314986087|gb|EFT30179.1| ribosomal protein S4 [Propionibacterium acnes HL005PA2]
 gi|314988702|gb|EFT32793.1| ribosomal protein S4 [Propionibacterium acnes HL005PA3]
 gi|315077130|gb|EFT49197.1| ribosomal protein S4 [Propionibacterium acnes HL053PA2]
 gi|315079817|gb|EFT51793.1| ribosomal protein S4 [Propionibacterium acnes HL078PA1]
 gi|315083184|gb|EFT55160.1| ribosomal protein S4 [Propionibacterium acnes HL027PA2]
 gi|315086862|gb|EFT58838.1| ribosomal protein S4 [Propionibacterium acnes HL002PA3]
 gi|315089954|gb|EFT61930.1| ribosomal protein S4 [Propionibacterium acnes HL072PA1]
 gi|315090476|gb|EFT62452.1| ribosomal protein S4 [Propionibacterium acnes HL110PA4]
 gi|315093709|gb|EFT65685.1| ribosomal protein S4 [Propionibacterium acnes HL060PA1]
 gi|315096724|gb|EFT68700.1| ribosomal protein S4 [Propionibacterium acnes HL038PA1]
 gi|315097952|gb|EFT69928.1| ribosomal protein S4 [Propionibacterium acnes HL059PA2]
 gi|315100595|gb|EFT72571.1| ribosomal protein S4 [Propionibacterium acnes HL046PA1]
 gi|315104001|gb|EFT75977.1| ribosomal protein S4 [Propionibacterium acnes HL050PA2]
 gi|315106038|gb|EFT78014.1| ribosomal protein S4 [Propionibacterium acnes HL030PA1]
 gi|315109198|gb|EFT81174.1| ribosomal protein S4 [Propionibacterium acnes HL030PA2]
 gi|327325233|gb|EGE67038.1| ribosomal protein S4 [Propionibacterium acnes HL096PA2]
 gi|327325529|gb|EGE67328.1| ribosomal protein S4 [Propionibacterium acnes HL103PA1]
 gi|327332742|gb|EGE74476.1| ribosomal protein S4 [Propionibacterium acnes HL097PA1]
 gi|327451455|gb|EGE98109.1| ribosomal protein S4 [Propionibacterium acnes HL087PA3]
 gi|327451570|gb|EGE98224.1| ribosomal protein S4 [Propionibacterium acnes HL092PA1]
 gi|327451857|gb|EGE98511.1| ribosomal protein S4 [Propionibacterium acnes HL083PA2]
 gi|328752071|gb|EGF65687.1| ribosomal protein S4 [Propionibacterium acnes HL087PA1]
 gi|328755531|gb|EGF69147.1| ribosomal protein S4 [Propionibacterium acnes HL025PA2]
 gi|328756316|gb|EGF69932.1| ribosomal protein S4 [Propionibacterium acnes HL020PA1]
 gi|328761350|gb|EGF74877.1| ribosomal protein S4 [Propionibacterium acnes HL099PA1]
          Length = 201

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  KS    R Y PG+HG+ R     Y  LQLR KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EADR++G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR    D+I+V++KSK L  ++ A +  E RDVP ++ V  +      
Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + V   + +    +VE YS+
Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201


>gi|258648133|ref|ZP_05735602.1| ribosomal protein S4 [Prevotella tannerae ATCC 51259]
 gi|260852014|gb|EEX71883.1| ribosomal protein S4 [Prevotella tannerae ATCC 51259]
          Length = 202

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K +I RR GE ++G  K  ++ R++ PG HG  R+ K S +G+ L  KQK K 
Sbjct: 1   MARYIGPKSRIARRFGEAIFGADK-VLSRRNFPPGQHGNGRRRKTSEYGVMLAEKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A  S G T   L+  LE RLD +VYR    PT  AARQ VNHRH
Sbjct: 60  TYGVL-EKQFRNMFEKASASNGITGEILLQNLECRLDNVVYRLGIAPTRAAARQLVNHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+   I SY  K G ++ V++KSK L  + ++          ++  +        +
Sbjct: 119 ITVDGKVTGIASYSVKPGQIVAVREKSKSLEVIADSLAGFNHSKYPWMEWDESAKAGKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P        P  ++  L+VE YS+
Sbjct: 179 HKPERAD---IPENIKEQLIVELYSK 201


>gi|119484418|ref|ZP_01619035.1| 30S ribosomal protein S4 [Lyngbya sp. PCC 8106]
 gi|119457892|gb|EAW39015.1| 30S ribosomal protein S4 [Lyngbya sp. PCC 8106]
          Length = 202

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K  V  R+Y PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRK--VARRAYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     K+A R+ G T   L+  LE RLD  ++R    PTI  ARQ VNH H
Sbjct: 58  NYG-LSEKQLLRYVKKARRATGSTGQVLLQMLEMRLDNTIFRLGMAPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VN R V++ SY+C+ GDV+ ++ K K    V    Q     +VP ++ ++ + ++A  
Sbjct: 117 VTVNDRVVDVASYQCRPGDVVGIRNKEKSREMVKANLQYPGLANVPSHLELDKEKLLAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NSVIDR---EWVALQVNELLVVEYYSR 200


>gi|327449339|gb|EGE95993.1| ribosomal protein S4 [Propionibacterium acnes HL013PA2]
          Length = 201

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  KS    R Y PG+HG+ R     Y  LQLR KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EADR++  T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFRRYYEEADRAQSKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR    D+I+V++KSK L  ++ A +  E RDVP ++ V  +      
Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + V   + +    +VE YS+
Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201


>gi|323339475|ref|ZP_08079754.1| 30S ribosomal protein S4 [Lactobacillus ruminis ATCC 25644]
 gi|323093089|gb|EFZ35682.1| 30S ribosomal protein S4 [Lactobacillus ruminis ATCC 25644]
          Length = 202

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HGQ  + K S +GLQLR KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYAPGQHGQNNRRKLSEYGLQLREKQKLRM 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG +SE++F ++F +A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  TYG-LSERQFANLFVKAGKIREGKHGDNFMILLERRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G VI ++++SK L  V +A +      P ++S + + M  + 
Sbjct: 119 HITVDGKRVDIPSYEVKPGQVISLRERSKNLQVVKDALEAVVGRAP-FVSFDENKMEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   LVVE+Y++
Sbjct: 178 VRLPEREE---LDANIDEALVVEYYNK 201


>gi|227524306|ref|ZP_03954355.1| 30S ribosomal protein S4 [Lactobacillus hilgardii ATCC 8290]
 gi|227088537|gb|EEI23849.1| 30S ribosomal protein S4 [Lactobacillus hilgardii ATCC 8290]
          Length = 231

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G +L G  K  ++ R Y PG HGQ R+ K S +GLQL+ KQK++ 
Sbjct: 29  MSRYTGPSWRISRRLGISLSGTGKE-LSRRPYAPGDHGQGRRQKLSEYGLQLKEKQKLRY 87

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + R      N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 88  MYG-LTERQFSNLFVRAGKIREGKHGVNFMILLERRLDNIVYRLGLATTRRQARQLVNHG 146

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G V+ V++KSK L  V  A + A    P+Y++ + D +  + 
Sbjct: 147 HITVDGKRVDIPSYEVKTGQVVSVREKSKDLQVVKNAVE-AVVGRPQYVNFDADKLEGSL 205

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +  +L+VE+Y++
Sbjct: 206 VRLPQREE---LDADIDESLIVEYYNK 229


>gi|330833751|ref|YP_004402576.1| 30S ribosomal protein S4 [Streptococcus suis ST3]
 gi|329307974|gb|AEB82390.1| 30S ribosomal protein S4 [Streptococcus suis ST3]
          Length = 203

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRLGLATTHRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR + G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVEVGQVISVREKSIKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVEFY++
Sbjct: 178 TRLPERDE---INPEINEALVVEFYNK 201


>gi|75910501|ref|YP_324797.1| 30S ribosomal protein S4 [Anabaena variabilis ATCC 29413]
 gi|90101675|sp|Q3M534|RS4_ANAVT RecName: Full=30S ribosomal protein S4
 gi|75704226|gb|ABA23902.1| SSU ribosomal protein S4P [Anabaena variabilis ATCC 29413]
          Length = 202

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KS    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRKKRSEY-AIRLEEKQKLRL 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     + A R  G T   L+  LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-LTEKQLLRYVRRARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR VNI SY+C+ G+ I V+ K+     V    Q     ++P ++  + + +V   
Sbjct: 117 VTVNGRVVNIASYQCRPGEEIAVRDKAPSRKLVENNLQYPGLANLPSHLEFDKNKLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIER---EWVALQVNELLVVEYYSR 200


>gi|34580606|ref|ZP_00142086.1| 30S ribosomal protein S4 [Rickettsia sibirica 246]
 gi|28261991|gb|EAA25495.1| 30S ribosomal protein S4 [Rickettsia sibirica 246]
          Length = 224

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 1/200 (0%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           SK+K  RR+G +LWG  K   NTR+Y PG HGQ    K S +GL L+AKQ++K +YG ++
Sbjct: 26  SKYKASRRLGVSLWGDGKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCHYGRVT 85

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+FR+IF  A + +G+T  N I  LESRLDT+VYR    PTIFAARQ V+H H+ +NG+
Sbjct: 86  EKQFRNIFALAQKMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGK 145

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
             +I S R K GDVIEVK+  KQ+  + E+     +  P Y+S +  ++   ++R+P+ L
Sbjct: 146 KADIASIRLKAGDVIEVKESVKQIPLIQESVSKQGQTTPGYLSFDVPSLTGKYLRVPA-L 204

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
            DVPYP   + +LV+E YSR
Sbjct: 205 SDVPYPFEAEVHLVIELYSR 224


>gi|309778473|ref|ZP_07673375.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 3_1_53]
 gi|308913769|gb|EFP59607.1| ribosomal protein S4 [Erysipelotrichaceae bacterium 3_1_53]
          Length = 200

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G ++       +  R+Y PG HG  ++ K + +G QLR KQK++ 
Sbjct: 1   MSRINGPVWKTSRRLGFSI-LETGEELQKRAYAPGQHGPTKRVKLTNYGQQLREKQKIRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F + F +A + +G T  N +  LESRLD ++YR  F  T  AARQ VNH H
Sbjct: 60  MYG-LNERQFYNTFMKASKMKGVTGDNFLGLLESRLDNLIYRMGFARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I S+  K G V+EVK+KSK + ++ EA +     V  ++ V+ D    T++
Sbjct: 119 ILVNGKKVDIPSFIAKPGMVVEVKEKSKSMKAINEAQEATLNTV-AFVDVDKDAKKGTYL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +           LVVEFY+R
Sbjct: 178 RLPERSE---LNAEFNELLVVEFYNR 200


>gi|222529703|ref|YP_002573585.1| 30S ribosomal protein S4 [Caldicellulosiruptor bescii DSM 6725]
 gi|254764564|sp|B9MKF4|RS4_ANATD RecName: Full=30S ribosomal protein S4
 gi|222456550|gb|ACM60812.1| ribosomal protein S4 [Caldicellulosiruptor bescii DSM 6725]
          Length = 208

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MSK      ++ RR G  L+ +       K     R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARL 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H H  VNGR+VNI SY  K GDVIEV ++SK     +E  +  A++  P+++  + +
Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLEKDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   + +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208


>gi|319940172|ref|ZP_08014525.1| 30S ribosomal protein S4 [Streptococcus anginosus 1_2_62CV]
 gi|319810643|gb|EFW06973.1| 30S ribosomal protein S4 [Streptococcus anginosus 1_2_62CV]
          Length = 203

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G     N +  LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-VGEKQFRNLFVQATKIKGGILGFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SYR   G VI V++KS ++ ++LEA + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYRVSVGQVISVREKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVE+Y++
Sbjct: 178 TRLPERDE---INPEINEALVVEYYNK 201


>gi|303328069|ref|ZP_07358508.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3]
 gi|302861895|gb|EFL84830.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3]
          Length = 208

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +K +I RR G  L+ +       K   + R Y PG HG+ RK    Y  +QLR 
Sbjct: 1   MAKYTEAKCRICRREGCKLFLKGDRCFTDKCAYDRRPYAPGQHGRARKKVSEY-AVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + E++F   F++A+  +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKTRRAYGVL-ERQFHGYFEKAEMQKGVTGTNLLVILERRLDNVVYRLGFANSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NG  V I S + K GD +EV +K++++  + EA + +A R  P ++  +  
Sbjct: 119 LVRHGIFTLNGHKVTIPSLQVKVGDSVEVPEKNRKIPVLAEAQEVIARRGCPGWLEADGA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P    D+ +PV     L+VE YS+
Sbjct: 179 AFKGTVKALPQR-DDIQFPV--NEQLIVELYSK 208


>gi|113474211|ref|YP_720272.1| 30S ribosomal protein S4 [Trichodesmium erythraeum IMS101]
 gi|123352777|sp|Q119M5|RS4_TRIEI RecName: Full=30S ribosomal protein S4
 gi|110165259|gb|ABG49799.1| SSU ribosomal protein S4P [Trichodesmium erythraeum IMS101]
          Length = 202

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KS    R+Y PG HGQ R+ +  Y  ++L  KQK+  
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRKSA--RRAYPPGQHGQNRRKRSEY-AIRLEEKQKLLY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++     K+A R+ G T   L+  LE RLD  V+R    PTI +ARQ VNH H
Sbjct: 58  NYG-VCERQLLRYVKKARRAGGSTGKVLLELLEMRLDNTVFRLGMAPTIPSARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+ V+I SY+CK G+VI VK+K K    V    Q     ++P ++  + + +V   
Sbjct: 117 VTVNGKVVSIASYQCKPGEVISVKEKEKSKEMVKTNLQYPGLANIPSHLEFDKNKLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   L+VE+YSR
Sbjct: 177 NGIVER---EWVALQINELLIVEYYSR 200


>gi|254517498|ref|ZP_05129554.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA]
 gi|226911247|gb|EEH96448.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA]
          Length = 206

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     RSY PG HG  +K   +Y G+QLR 
Sbjct: 1   MARYTGATCRLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGAAKKKLSNY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + E +FR+ +++AD  +G T  NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKARRIYGVL-ESQFRAYYEKADHMKGITGENLLKLLEMRLDNVVYRLGYGASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            VNH H LVN + V+I SYR    D I V +KS+         +   + +P+++  N +N
Sbjct: 119 LVNHGHFLVNDKKVDIPSYRVSVNDEITVTEKSRGTEKFKTFIENP-KTLPKWLEANVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  PS  +D+  PV     L+VE YS+
Sbjct: 178 YSGKIVAEPSR-EDIDVPV--NETLIVELYSK 206


>gi|218439509|ref|YP_002377838.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 7424]
 gi|226697832|sp|B7KK85|RS4_CYAP7 RecName: Full=30S ribosomal protein S4
 gi|218172237|gb|ACK70970.1| ribosomal protein S4 [Cyanothece sp. PCC 7424]
          Length = 202

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + ++ RR+GE      K+    R+Y PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MARYRGPRLRVVRRLGELPGLTRKNA--RRAYPPGQHGQNRRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     + A R+ G T   L+  LE RLD  V+R     TI AARQ VNH H
Sbjct: 58  NYG-VSEKQLIRYVRRARRATGSTGQTLLQLLEMRLDNTVFRLGMAGTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN R V+I SY+C+ GDVI+V+ + K    V    +     ++P ++  + + ++   
Sbjct: 117 ILVNDRVVDIASYQCRPGDVIKVRDQDKSRKLVQANMEYPGLANLPSHLEFDKNTLIGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIER---EWIALNINELLVVEYYSR 200


>gi|223936404|ref|ZP_03628316.1| ribosomal protein S4 [bacterium Ellin514]
 gi|223894922|gb|EEF61371.1| ribosomal protein S4 [bacterium Ellin514]
          Length = 202

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I RR G  ++G  K  +  R+YGPG+HG + + K + +GL L  KQK++ 
Sbjct: 1   MARYTGPRVRISRRFGIPIFGPTKY-LERRNYGPGVHGPKSRRKHTDYGLGLIEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + E++FR +++ A + RG T   ++  LE+RLD +V+   F  T  AARQ V+H H
Sbjct: 60  YYG-LMERQFRGVYERALKRRGVTGEQMLQILETRLDNVVFHLGFANTRAAARQLVSHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           V VNGR VNI S+  K  DVIE K  +       +  + +  R VP+++S+N + +    
Sbjct: 119 VRVNGRKVNIPSFALKVNDVIEAKDSNVSRQLATKNLETSTNRSVPDWLSLNKEALKGVV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +RIPS  +  P         VVEFYSR
Sbjct: 179 MRIPSRDEIQPIA---NEQAVVEFYSR 202


>gi|148655311|ref|YP_001275516.1| 30S ribosomal protein S4 [Roseiflexus sp. RS-1]
 gi|172048078|sp|A5USG3|RS4_ROSS1 RecName: Full=30S ribosomal protein S4
 gi|148567421|gb|ABQ89566.1| SSU ribosomal protein S4P [Roseiflexus sp. RS-1]
          Length = 206

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           M++      K+ RR+G  +  + +  +  R + PG HG   R+ + S +GLQL  KQK +
Sbjct: 1   MARYRGPVGKVSRRLGIGITDKGQRILAKRPFPPGQHGPSARRRQVSDYGLQLLEKQKAR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR IF++A R  G+T   L   LE RLD +VYR  F  T   ARQ V+H 
Sbjct: 61  YVYGVL-ERQFRRIFEKAQRFPGETGAYLFILLERRLDNVVYRLGFATTRAQARQLVSHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMV 176
           H+ VNGR  NI SY  + G+ I V+ +S++            LA    P+++ +N  ++ 
Sbjct: 120 HITVNGRKTNIPSYTVRVGETIAVRPESRRRTYFKNLIDSGALARHKTPDWLRLNPADLS 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              V +P      P    +   L+VEFYSR
Sbjct: 180 GEVVAMPRREDAEP---GINEQLIVEFYSR 206


>gi|119718096|ref|YP_925061.1| 30S ribosomal protein S4 [Nocardioides sp. JS614]
 gi|152112238|sp|A1SNI9|RS4_NOCSJ RecName: Full=30S ribosomal protein S4
 gi|119538757|gb|ABL83374.1| SSU ribosomal protein S4P [Nocardioides sp. JS614]
          Length = 202

 Score =  204 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G   S    R Y PG HG+ R  +  Y  LQLR KQK + 
Sbjct: 1   MARYTGPMTKKSRRLGVDLVG-GDSAYERRPYPPGQHGRGRIKESEYL-LQLREKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F + + EA R  G T  NL+  LE RLD +VYRA F  T   ARQ V H H
Sbjct: 59  TYGVL-EKQFHNYYTEASRRAGKTGDNLLQLLECRLDNVVYRAGFARTRRHARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
             VNG+ V+I S++    DVI+V++KS ++   + A +   ER VP ++      M    
Sbjct: 118 FKVNGKKVDIPSFQVTAHDVIDVREKSLEMTPFIVARETHGERVVPAWLEAIPSRMRVLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VE+YS+
Sbjct: 178 HQLPVRAQ---IDIPVQEQLIVEYYSK 201


>gi|312793912|ref|YP_004026835.1| 30S ribosomal protein S4 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181052|gb|ADQ41222.1| ribosomal protein S4 [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 208

 Score =  204 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MSK      ++ RR G  L+ +       K     R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H H  VNGR+VNI SY  K GDVIEV ++SK     +E  +  A++  P+++  + +
Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLDKDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   + +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208


>gi|313836059|gb|EFS73773.1| ribosomal protein S4 [Propionibacterium acnes HL037PA2]
 gi|314929595|gb|EFS93426.1| ribosomal protein S4 [Propionibacterium acnes HL044PA1]
 gi|314970518|gb|EFT14616.1| ribosomal protein S4 [Propionibacterium acnes HL037PA3]
 gi|328906196|gb|EGG25971.1| 30S ribosomal protein S4 [Propionibacterium sp. P08]
          Length = 201

 Score =  204 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  KS    R Y PG+HG+ R     Y  LQLR KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EADR++G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR    D+I+V++KSK L  ++ A +  E RD+P ++ V  +      
Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLHPIVVARETFETRDIPAWLEVRPNKGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + +   + +    +VE YS+
Sbjct: 178 HQLPTRDQII---IDVNEQAIVELYSK 201


>gi|269959712|ref|ZP_06174092.1| 30S ribosomal protein S4 [Vibrio harveyi 1DA3]
 gi|269835635|gb|EEZ89714.1| 30S ribosomal protein S4 [Vibrio harveyi 1DA3]
          Length = 202

 Score =  204 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  MYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNG+ VN+ S++    DV+ +++K+KQ A +  A ++AE R+ P +I V+   M  TF
Sbjct: 119 ILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVAEQREKPTWIEVDGGKMEGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P           +   L+VE YS+
Sbjct: 179 KRMPERSD---LSADINEQLIVELYSK 202


>gi|148270449|ref|YP_001244909.1| 30S ribosomal protein S4 [Thermotoga petrophila RKU-1]
 gi|170289156|ref|YP_001739394.1| RNA-binding S4 domain-containing protein [Thermotoga sp. RQ2]
 gi|281412756|ref|YP_003346835.1| ribosomal protein S4 [Thermotoga naphthophila RKU-10]
 gi|172047881|sp|A5IMB0|RS4_THEP1 RecName: Full=30S ribosomal protein S4
 gi|226695093|sp|B1LBL3|RS4_THESQ RecName: Full=30S ribosomal protein S4
 gi|147735993|gb|ABQ47333.1| SSU ribosomal protein S4P [Thermotoga petrophila RKU-1]
 gi|170176659|gb|ACB09711.1| RNA-binding S4 domain protein [Thermotoga sp. RQ2]
 gi|281373859|gb|ADA67421.1| ribosomal protein S4 [Thermotoga naphthophila RKU-10]
          Length = 209

 Score =  204 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +       K   + R Y PG HGQ R++K + +G+QLRA
Sbjct: 1   MARYTGPLCKLCRREGMKLYLKGERCYTDKCAFDRRPYAPGQHGQ-RRAKLTQYGIQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ +K+ YG I E++F    ++A +  GDT  NLI  LE+RLD +VYR  F      ARQ
Sbjct: 60  KQTVKRIYG-ILERQFERYVEKAMQKAGDTRENLIQILEARLDNVVYRMGFAINRRQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            VNH H LVNG+ VNI SY  K  DV+E+++KS+ L  + +A +   ER V  +I V++D
Sbjct: 119 LVNHGHFLVNGKKVNIPSYLLKPNDVVELREKSRDLEVIKKAVEANKERSVVPWIEVDYD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N   TF+R PS  +    PV +Q   V+EFYSR
Sbjct: 179 NYRGTFLRYPSLEEVTDLPVDLQT--VIEFYSR 209


>gi|225165488|ref|ZP_03727314.1| ribosomal protein S4 [Opitutaceae bacterium TAV2]
 gi|224800265|gb|EEG18669.1| ribosomal protein S4 [Opitutaceae bacterium TAV2]
          Length = 202

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      ++ RR  + L+G  K     R Y PG HG + + K S +   L  KQK++ 
Sbjct: 1   MARYTGPTTRLSRRFNQPLFGATK-AYEKRPYPPGQHGPKLRRKVSEYAAGLNEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  F+ A R RG T    +  LE+RLD+I+Y   F  +  AARQ V H H
Sbjct: 60  VYG-LLERQFRRTFEAAKRERGVTGERFLQLLETRLDSIIYLLGFARSRAAARQLVGHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG  V+I SY  + GD +E+K  +          +    R+VP ++++N +   A  
Sbjct: 119 VRVNGHKVDIASYAVQVGDELEIKNAAGSRQLAQRNLEETRARNVPGWLTLNAEAFKAVV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P+  +  P    +   L+VEFYSR
Sbjct: 179 NRLPTREEMAP---DINEQLIVEFYSR 202


>gi|326203868|ref|ZP_08193730.1| ribosomal protein S4 [Clostridium papyrosolvens DSM 2782]
 gi|325985966|gb|EGD46800.1| ribosomal protein S4 [Clostridium papyrosolvens DSM 2782]
          Length = 208

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR GE L+ +       K  V  R Y PG HGQ +K    Y G+QLR 
Sbjct: 1   MARYTDASCRLCRREGEKLFLKGERCYTDKCSVARRPYAPGQHGQAKKKMSEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           K K++++YG + E +F   F+ A R +G T  NL+  LE+RLD +VYR     +   +RQ
Sbjct: 60  KAKVRRFYGVL-EGQFSQYFEMASRRKGITGENLLQILETRLDNVVYRLGLGTSRPESRQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173
            V H H  +NG+ VNI SY  K GDVI V  KSK    V    ++A    VP+++  N +
Sbjct: 119 LVTHGHFTINGKRVNIPSYLIKVGDVIAVADKSKSSPKVKSIREIAGGKVVPKWLEFNEE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   V +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGKVVALPAR-EDIDLP--IREHLIVELYSK 208


>gi|314924148|gb|EFS87979.1| ribosomal protein S4 [Propionibacterium acnes HL001PA1]
          Length = 201

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  KS    R Y PG+HG+ R     Y  LQLR KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EADR++G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR    D+I+V++KSK    ++ A +  E RDVP ++ V  +      
Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDHPPIVIARETFETRDVPAWLEVRPNKGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + V   + +    +VE YS+
Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201


>gi|313901168|ref|ZP_07834656.1| ribosomal protein S4 [Clostridium sp. HGF2]
 gi|312954126|gb|EFR35806.1| ribosomal protein S4 [Clostridium sp. HGF2]
          Length = 200

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G ++       +  R+Y PG HG  ++ K + +G QLR KQK++ 
Sbjct: 1   MSRINGPVWKTSRRLGFSI-LETGEELQKRAYAPGQHGPTKRVKLTNYGQQLREKQKIRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F + F +A + +G T  N +  LESRLD +VYR  F  T  AARQ VNH H
Sbjct: 60  MYG-LNERQFYNTFIKASKMKGVTGDNFLGLLESRLDNLVYRMGFARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I S+  K G V+E+K+KS+ + ++ EA +     V  +I V+ D    T++
Sbjct: 119 ILVNGKKVDIPSFIAKPGMVVEIKEKSRDMKAINEALEATLNTV-AFIDVDKDAKKGTYL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +           LVVEFY+R
Sbjct: 178 RLPERSE---LNSEFNELLVVEFYNR 200


>gi|282896815|ref|ZP_06304821.1| Ribosomal protein S4 [Raphidiopsis brookii D9]
 gi|281198224|gb|EFA73114.1| Ribosomal protein S4 [Raphidiopsis brookii D9]
          Length = 202

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+GE      KS    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGELPGLTRKSA--RRAYAPGQHGQNRKKRSEY-AIRLEEKQKLRL 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     ++A R  G T   L+  LE RLD  V+R    PTI AARQ V+H H
Sbjct: 58  NYG-LTEKQMLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTISAARQLVSHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V +NGR VNI SY+C+ G+ I VK K      V    Q     ++P ++  + + +    
Sbjct: 117 VTINGRVVNIASYQCRPGEEIGVKDKEASRKLVENNLQYPGLANLPNHLEFDKNKLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIER---EWVALQVNELLVVEYYSR 200


>gi|297567257|ref|YP_003686229.1| 30S ribosomal protein S4 [Meiothermus silvanus DSM 9946]
 gi|296851706|gb|ADH64721.1| ribosomal protein S4 [Meiothermus silvanus DSM 9946]
          Length = 205

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 119/209 (56%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +      KI RR+G N+    K    ++ R Y PG HGQ+R  +PS + ++LR KQK+
Sbjct: 1   MGRYRGPIVKIARRLGVNIAETEKVQKYLDRRPYAPGQHGQKRARRPSDYAVRLREKQKL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y  + E+ FR++F+EA + +G T    +  LESRLD +V+R     T   ARQFV H
Sbjct: 61  RFIYD-MGERSFRNLFEEASKKKGVTGTVFLQLLESRLDNVVFRLGIASTRRQARQFVRH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVA 177
            H+LVNG+ VNI  YR K+GD I V +K++ +  + E  +    R    ++  +   M  
Sbjct: 120 GHILVNGKRVNIAGYRVKQGDTIAVSKKAQDIPFIKENIERFKNRKTFRWLEFDPTTMSG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            F+R+P   +D+  PV    NLV+EFYSR
Sbjct: 180 KFLRLPDR-EDLALPV--NENLVIEFYSR 205


>gi|15644222|ref|NP_229273.1| 30S ribosomal protein S4 [Thermotoga maritima MSB8]
 gi|7388196|sp|Q9X1I3|RS4_THEMA RecName: Full=30S ribosomal protein S4
 gi|4982039|gb|AAD36541.1|AE001798_6 ribosomal protein S4 [Thermotoga maritima MSB8]
          Length = 209

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +       K   + R Y PG HGQ R++K + +G+QLRA
Sbjct: 1   MARYTGPLCKLCRREGMKLYLKGERCYTDKCAFDRRPYAPGQHGQ-RRTKLTQYGIQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ +K+ YG I E++F    ++A +  GDT  NLI  LE+RLD +VYR  F      ARQ
Sbjct: 60  KQTVKRIYG-ILERQFERYVEKAMQKAGDTRENLIQILEARLDNVVYRMGFAINRRQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            VNH H LVNG+ VNI SY  +  DV+EV++KS+ L  + +A +   ER +  +I V++D
Sbjct: 119 LVNHGHFLVNGKKVNIPSYLLRPNDVVEVREKSRDLEVIKKAIEANKERSIVPWIEVDYD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N   TF+R PS  +    PV +Q   V+EFYSR
Sbjct: 179 NYRGTFLRYPSLEEVTDLPVDLQT--VIEFYSR 209


>gi|312622072|ref|YP_004023685.1| 30S ribosomal protein S4 [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202539|gb|ADQ45866.1| ribosomal protein S4 [Caldicellulosiruptor kronotskyensis 2002]
          Length = 208

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MSK      ++ RR G  L+ +       K     R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARL 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H H  VNGR+VNI SY  K GDVIEV ++SK     +E  +  A++  P+++  + +
Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLDKDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   + +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGKVIALPTR-EDIDMP--IREHLIVELYSK 208


>gi|312135469|ref|YP_004002807.1| 30S ribosomal protein S4 [Caldicellulosiruptor owensensis OL]
 gi|311775520|gb|ADQ05007.1| ribosomal protein S4 [Caldicellulosiruptor owensensis OL]
          Length = 208

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MSK      ++ RR G  L+ +       K     R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V+H H  VNGR+VNI SY  K GDVIEV ++SK     +E  +  A++  P+++  + +
Sbjct: 119 LVSHAHFKVNGRTVNIPSYLVKVGDVIEVDERSKSKTRFVEIKEKYAKKPSPKWLEKDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N++   + +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLIGKVIALPTR-EDIDMP--IREHLIVELYSK 208


>gi|160915194|ref|ZP_02077407.1| hypothetical protein EUBDOL_01202 [Eubacterium dolichum DSM 3991]
 gi|158432993|gb|EDP11282.1| hypothetical protein EUBDOL_01202 [Eubacterium dolichum DSM 3991]
          Length = 200

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G ++       +  R+Y PG HG  ++ K + +GLQLR KQK++ 
Sbjct: 1   MSRINGPVWKTSRRLGFSI-LETGEELQRRAYAPGQHGPTKRVKLTQYGLQLREKQKIRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F ++F +A + +G    N ++ LESRLD +VYR  F  T  AARQ VNH H
Sbjct: 60  MYG-LNERQFYNLFTKASKMKGVKGDNFLALLESRLDNLVYRMGFARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I SY  K G VIEVK+KSK L  + EA + +   V  ++ VN D    T++
Sbjct: 119 ILVNGKKVDIPSYIAKPGAVIEVKEKSKNLQVINEALEASLNTV-AFVDVNKDAKKGTYL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   LVVEFY+R
Sbjct: 178 RLPERNE---LNSEINELLVVEFYNR 200


>gi|115376109|ref|ZP_01463354.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
 gi|310821021|ref|YP_003953379.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
 gi|115366924|gb|EAU65914.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
 gi|309394093|gb|ADO71552.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
          Length = 208

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++  +S  +I RR    ++ +       K  +  R Y PG HGQ R     Y G+QLR 
Sbjct: 1   MARYTASACRICRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGRVKFSGY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  +  A  ++G T  NL+  LE RLD +V+R  F  T   ARQ
Sbjct: 60  KQKVKRMYG-LLESQFRGYYHRASAAKGKTGENLLQQLELRLDNVVFRMGFADTRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNG+ VNI S+  K G  +EV +KS+++  + EA +  + R VP++I ++  
Sbjct: 119 LVRHGHFSVNGKKVNIPSFAVKPGSSVEVVEKSRKVLRISEALETVDRRGVPQWIDLDKK 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   T   +P+  +D+  P  +Q  L+VE YS+
Sbjct: 179 SFKGTVKTVPNR-EDLTMP--IQEQLIVELYSK 208


>gi|310829557|ref|YP_003961914.1| ribosomal protein S4 [Eubacterium limosum KIST612]
 gi|308741291|gb|ADO38951.1| ribosomal protein S4 [Eubacterium limosum KIST612]
          Length = 209

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 115/214 (53%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++   +  +  RR G  L+ +        K     R   PG HG +R++K S +GLQLR
Sbjct: 1   MARYTEASCRQCRREGMKLYLKGERCYSTNKCAFERRPTPPGQHG-KRRTKLSEYGLQLR 59

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+F   F  A++ +G T  NL+  LE+RLD +VYR     +   AR
Sbjct: 60  EKQKVKRIYGVL-EKQFAHYFDLAEKQKGITGSNLLEILETRLDNVVYRLGLATSRKEAR 118

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNH 172
           Q V H H LVNG+ VN+ SY  KEGD IEVK KSK+     E  +  E R V  ++S + 
Sbjct: 119 QLVQHAHFLVNGKKVNVPSYLVKEGDTIEVKAKSKKSPKFKEILEATENRAVAPWLSADL 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D +    +  P+        V +  +L+VE YS+
Sbjct: 179 DTLSGKVIGRPTR---EDIDVEIAEHLIVELYSK 209


>gi|296272961|ref|YP_003655592.1| 30S ribosomal protein S4 [Arcobacter nitrofigilis DSM 7299]
 gi|296097135|gb|ADG93085.1| ribosomal protein S4 [Arcobacter nitrofigilis DSM 7299]
          Length = 208

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR+  +L  +       KS +  R + PG HGQRR     Y GLQLR 
Sbjct: 1   MARYRGPVEKIERRLDADLGLKGERRLNGKSALEKRPFAPGQHGQRRTKLSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR  FKEA R  G+T  NLI+ +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRKYFKEAARREGNTGSNLITLIEQRLDNVVYRMGFATTRANARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
           F  H H+LV+G+ V+I S+  K G  IE+K+KSK    ++ A +L  +  + E++ V+ D
Sbjct: 119 FTTHGHILVDGQKVDIPSFVVKPGQKIEIKEKSKTNPQIVRALELTNQTGMVEWVDVDKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F RIP+  + V   + ++  L+VE YS+
Sbjct: 179 KAFGIFTRIPTREEVV---IPVEERLIVELYSK 208


>gi|152993918|ref|YP_001359639.1| 30S ribosomal protein S4 [Sulfurovum sp. NBC37-1]
 gi|172048747|sp|A6QCS3|RS4_SULNB RecName: Full=30S ribosomal protein S4
 gi|151425779|dbj|BAF73282.1| 30S ribosomal protein S4 [Sulfurovum sp. NBC37-1]
          Length = 208

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 131/213 (61%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      +++RR+G +L  +       KS +  R Y PG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGPVERLERRLGVDLGLKGERRLAGKSALEKRPYAPGQHGQ-RRTKISEYGLQLQE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG  SEK+FR+++KEA+R  G+T   LI  LE RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKFMYGT-SEKQFRALYKEANRKEGNTGSILIQLLEQRLDNVVYRMGFATTRASARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
           FVNH HVLV+G+ V+I SYR K G  IE+++KSK  + +L A +L  +  + E++ V+ +
Sbjct: 119 FVNHGHVLVDGKRVDIPSYRVKAGQKIEIREKSKTNSQILRAIELTNQTGMVEWVDVDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F R+P   +     + ++  L+VE YS+
Sbjct: 179 KLFGIFSRVPEREE---IAIPVEERLIVELYSK 208


>gi|312889341|ref|ZP_07748895.1| SSU ribosomal protein S4P [Mucilaginibacter paludis DSM 18603]
 gi|311298218|gb|EFQ75333.1| SSU ribosomal protein S4P [Mucilaginibacter paludis DSM 18603]
          Length = 202

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI RR  E ++G  K  +  ++Y PG+HG  +R+ K S +  QL  KQK+K
Sbjct: 1   MARYTGPKSKIARRFREPIFGPDK-ALERKNYPPGMHGASKRRGKQSEYSTQLMEKQKVK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK+F ++F  A    G T  NL+ FLE+RLD  VYR    PT   ARQ V H+
Sbjct: 60  YTYGVL-EKQFENLFHRASSKEGITGENLLKFLEARLDNAVYRLGIAPTRSGARQLVGHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG  VNI SY  K GDVI V++KSK + S+  +      +   ++  +  N+   F
Sbjct: 119 HITVNGEVVNIASYALKAGDVIAVREKSKTMESITTSVAGRRINKHSWLEWDPSNLTGKF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P+  +    P  ++ NL+VE YS+
Sbjct: 179 LNYPNRDE---IPENIKENLIVELYSK 202


>gi|222099994|ref|YP_002534562.1| 30S ribosomal protein S4 [Thermotoga neapolitana DSM 4359]
 gi|254764618|sp|B9K8B3|RS4_THENN RecName: Full=30S ribosomal protein S4
 gi|221572384|gb|ACM23196.1| 30S ribosomal protein S4 [Thermotoga neapolitana DSM 4359]
          Length = 209

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K   + R Y PG HGQ R+SK + +G+QLRA
Sbjct: 1   MARYTGPVCRLCRREGMKLYLKGERCYTDKCAFDRRPYAPGQHGQ-RRSKLTQYGIQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ +K+ YG I E++F    ++A +  GDT  NLI  LE+RLD +VYR  F      ARQ
Sbjct: 60  KQTVKRIYG-ILERQFERYVEKAMKRAGDTRENLIQLLEARLDNVVYRMGFAINRRQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            VNH H LVNG+ V+I SY  +  DV+EV++KS+ +  + +A +   ER+   +I V+ D
Sbjct: 119 LVNHGHFLVNGKKVDIPSYLLRPNDVVEVREKSRDIEVIKKAIEFNRERNTVPWIEVDFD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N   TF+R P   +    PV +Q   V+EFYSR
Sbjct: 179 NYKGTFLRYPRLEEVTDLPVDLQT--VIEFYSR 209


>gi|159027856|emb|CAO87069.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 202

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLTRKNA--RRAYAPGQHGQARKKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     ++A R+ G T   L+  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VSEKQLVRYVRKARRATGSTGQVLLQLLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR V+I SY+C+ GDVI V+ + +    V    +     ++P ++  + + +V   
Sbjct: 117 VTVNGRVVDIASYQCRPGDVIGVRNQERSQDLVKRNMEYPGLANLPSHLEFDKNTLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVVER---EWIALSINELLVVEYYSR 200


>gi|153952888|ref|YP_001393653.1| 30S ribosomal protein S4 [Clostridium kluyveri DSM 555]
 gi|219853553|ref|YP_002470675.1| hypothetical protein CKR_0210 [Clostridium kluyveri NBRC 12016]
 gi|146345769|gb|EDK32305.1| RpsD1 [Clostridium kluyveri DSM 555]
 gi|219567277|dbj|BAH05261.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 206

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +  ++ RR G  L+ +       K   + R Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MAKYTGAVCRLCRREGLKLFLKGDRCYTDKCGFSRRGYAPGQHGQGRK-KVSNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + EK+FR  + +ADR +G T  NL+  LE+RLD +VY+  +  +   ARQ
Sbjct: 60  KQKSKRIYG-LLEKQFRKYYDKADRKKGITGENLLVLLETRLDNVVYKLGYGQSRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  VNGR VNI S++    D I VK  SK        ++   + +P ++  N +N
Sbjct: 119 LVTHGHFKVNGRKVNIPSFKVSVNDTISVKDGSKSSEKFKTFAENP-KTLPTWLEGNIEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +R P   +     V +   L+VE YS+
Sbjct: 178 FEGRVIREPMREE---IDVPVNETLIVELYSK 206


>gi|299138173|ref|ZP_07031353.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8]
 gi|298600103|gb|EFI56261.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8]
          Length = 210

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 12/214 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLR 53
           M++      ++ RR G  L+ +       K PV  R++ PG HGQ +K K    +GLQLR
Sbjct: 1   MARYTGPVCRLCRRDGTKLFLKGPKCFTDKCPVEKRNFPPGQHGQSKKQKKVVGYGLQLR 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK K+ Y  + E +FR+ +++A    G T   L+  LE+RLD + YR  F  +   AR
Sbjct: 61  EKQKAKRIYFTL-ETQFRAYYEKAANRPGVTGELLLQQLETRLDNVCYRLGFALSRRQAR 119

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNH 172
           Q V H HV VNGR VNI S++CK GD I +++ SK+L  +  +   L+ ++   +I  N 
Sbjct: 120 QVVRHGHVQVNGRKVNIPSFQCKIGDEIAIREGSKKLVLLEASQDFLSGQNRVGWIDANR 179

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +N+    + +P   +DV  PV     L+VE YS+
Sbjct: 180 ENLSGKIIALPKR-EDVNLPV--NEQLIVELYSK 210


>gi|189501628|ref|YP_001957345.1| RNA-binding S4 domain-containing protein [Candidatus Amoebophilus
           asiaticus 5a2]
 gi|226697797|sp|B3EUJ7|RS4_AMOA5 RecName: Full=30S ribosomal protein S4
 gi|189497069|gb|ACE05616.1| RNA-binding S4 domain protein [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 200

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI RR  E ++G  K  +  ++Y PG HG+ RK K  Y  +QL  K K K 
Sbjct: 1   MARYIGPKAKISRRFNEPIFGPSK-ALQKKNYPPGQHGKIRKKKSEY-AIQLMEKGKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F ++F +A + +G T   L+ +LE+RLD +VYR    PT  +ARQ V+H+H
Sbjct: 59  IYG-LLEKQFANLFYKAAKKKGVTGELLLQYLETRLDNVVYRLGITPTRRSARQLVSHKH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SY  K GD+I + +K+K   ++ E       +   ++  +   M+   +
Sbjct: 118 ITVNGKIVNIPSYALKVGDIIGLTEKTKSSNAITERISSHSHNKNNWLEWDSKQMIGKVM 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P   +    P  +    +VE YS+
Sbjct: 178 SLPHREE---IPEKINEQSIVELYSK 200


>gi|255970731|ref|ZP_05421317.1| 30S ribosomal protein S4 [Enterococcus faecalis T1]
 gi|255974305|ref|ZP_05424891.1| 30S ribosomal protein S4 [Enterococcus faecalis T2]
 gi|256761099|ref|ZP_05501679.1| 30S ribosomal protein S4 [Enterococcus faecalis T3]
 gi|255961749|gb|EET94225.1| 30S ribosomal protein S4 [Enterococcus faecalis T1]
 gi|255967177|gb|EET97799.1| 30S ribosomal protein S4 [Enterococcus faecalis T2]
 gi|256682350|gb|EEU22045.1| 30S ribosomal protein S4 [Enterococcus faecalis T3]
          Length = 208

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 6   MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYKPGQHGPNSRGKVSEYGMQLTEKQKLRH 64

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 65  MYG-MNERQFRTLFIKASKIKEGKHGVNFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 123

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI V++KS+ ++++ EA + A    P ++S + + +  +F
Sbjct: 124 HITVDGKRVDIPSYHVEVGQVIGVREKSQNISTIKEAVE-ATVGRPAFVSFDTEKLEGSF 182

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +  P    +   LVVE+Y
Sbjct: 183 TRLPERDELYP---EIDEALVVEYY 204


>gi|51245003|ref|YP_064887.1| 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54]
 gi|61215518|sp|Q6AP44|RS4_DESPS RecName: Full=30S ribosomal protein S4
 gi|50876040|emb|CAG35880.1| probable 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54]
          Length = 210

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +       K     R++ PG HGQ R  K S + +QLR 
Sbjct: 1   MARNIGAVCRRCRRENLKLFLKGDRCYSDKCSFERRAFAPGQHGQARFKKVSDYAVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K  YG + E +FR  F++A+  +G    NL+  LE RLD  V+RA F  +   ARQ
Sbjct: 61  KQKVKSMYGVL-EAQFRLTFEKAEAQKGVAGENLLILLERRLDNAVFRAGFASSRTQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H+H+L+NG+ V+I SY+  EGDVI +++KS+  A V++  +    R VP ++ ++ D
Sbjct: 120 IVRHKHILINGKRVDIPSYQVSEGDVISLREKSRANAGVVDNLEAVVRRGVPTWLELDKD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N  A+   +P+  +     + +Q  L+VE YS+
Sbjct: 180 NFKASVKALPNREE---ITMPIQERLIVELYSK 209


>gi|229552047|ref|ZP_04440772.1| ribosomal protein S4 [Lactobacillus rhamnosus LMS2-1]
 gi|229314624|gb|EEN80597.1| ribosomal protein S4 [Lactobacillus rhamnosus LMS2-1]
          Length = 239

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G +L G  K  +  R Y PG HG   + K S +G QLR KQK++ 
Sbjct: 37  MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 95

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F  A + +  T   N +  LE+RLD +V+R     +   ARQ VNH 
Sbjct: 96  MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 154

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ ++I SY  + G VI ++++S+ LA V EA +      P Y++ + +    + 
Sbjct: 155 HITVDGKRLDIPSYEVQPGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 213

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +  P    +  +LVVE+Y
Sbjct: 214 VRLPERGELEP---EVDESLVVEYY 235


>gi|323466846|gb|ADX70533.1| 30S ribosomal protein S4 [Lactobacillus helveticus H10]
          Length = 203

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R  +   N +  LE RLD+IVYR     T   ARQ V+H 
Sbjct: 60  MYG-LNERQFRTLFTRAGKIREGEHGTNFMILLERRLDSIVYRLGLATTREQARQLVSHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G  I +K+KSK L  V +A   A    P ++S + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201


>gi|58337098|ref|YP_193683.1| 30S ribosomal protein S4 [Lactobacillus acidophilus NCFM]
 gi|75507617|sp|Q5FKX2|RS4_LACAC RecName: Full=30S ribosomal protein S4
 gi|58254415|gb|AAV42652.1| 30s ribosomal protein S4 [Lactobacillus acidophilus NCFM]
          Length = 203

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD+IVYR     T   ARQ VNH 
Sbjct: 60  MYG-LNERQFRTLFIRAGKIREGQHGINFMILLERRLDSIVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G  I +K KSK L  + +A + A    P ++S + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKDKSKNLQQIRDALE-ATTARPSFVSFDENKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201


>gi|166365984|ref|YP_001658257.1| 30S ribosomal protein S4 [Microcystis aeruginosa NIES-843]
 gi|189045386|sp|B0JLP1|RS4_MICAN RecName: Full=30S ribosomal protein S4
 gi|166088357|dbj|BAG03065.1| 30S ribosomal protein S4 [Microcystis aeruginosa NIES-843]
          Length = 202

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLTRKNA--RRAYAPGQHGQARKKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     ++A R+ G T   L+  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VSEKQLIRYVRKARRATGSTGQVLLQLLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR V+I SY+C+ GDVI V+ + +    V    +     ++P ++  + + +V   
Sbjct: 117 VTVNGRVVDIASYQCRPGDVIGVRNQERSQDLVKRNMEYPGLANLPSHLEFDKNTLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVVER---EWIALSINELLVVEYYSR 200


>gi|159901450|ref|YP_001547697.1| 30S ribosomal protein S4 [Herpetosiphon aurantiacus ATCC 23779]
 gi|226699075|sp|A9B436|RS4_HERA2 RecName: Full=30S ribosomal protein S4
 gi|159894489|gb|ABX07569.1| ribosomal protein S4 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 211

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 13/215 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP----KSPVNTR-SYGPGLHGQR-RKSKPSYFGLQLRA 54
           M++      K+ RR G +L  +     +  +  R S  PG HG   R+ + S +G+QLR 
Sbjct: 1   MARYTGPVCKLSRREGVDLMLKSGNSGRKVLERRGSQPPGQHGASVRRRQLSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++FR  +  A R+ G T   L+  LE RLD +V+R  +  T   ARQ
Sbjct: 61  KQKVRRIYGVL-ERQFRRYYGIATRTTGQTGAVLLQILERRLDNVVFRLGYAVTRAQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV---PEYISVN 171
            VNH H+ VNGR  +I S   + GDVI V+ +S++     +  +  + +    P ++S++
Sbjct: 120 LVNHGHITVNGRKTDIPSALVEVGDVIGVRAESRKRDYFKDLEETKQLNRVSPPSWLSLD 179

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              M       PS  +     + +   L+VEFYSR
Sbjct: 180 AGKMEGVVQTFPSREE---LDMSINEQLIVEFYSR 211


>gi|15672266|ref|NP_266440.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. lactis Il1403]
 gi|281490826|ref|YP_003352806.1| 50S ribosomal protein S4P [Lactococcus lactis subsp. lactis KF147]
 gi|26399484|sp|Q9CIS2|RS4_LACLA RecName: Full=30S ribosomal protein S4
 gi|12723147|gb|AAK04382.1|AE006266_1 30S ribosomal protein S4 [Lactococcus lactis subsp. lactis Il1403]
 gi|281374584|gb|ADA64104.1| SSU ribosomal protein S4P [Lactococcus lactis subsp. lactis KF147]
 gi|326405863|gb|ADZ62934.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. lactis CV56]
          Length = 203

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 122/207 (58%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRYGISLSGSGKE-IARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG +SE++FR+++  A + +  T   N ++ LE RLD +V+R     T   ARQFVNH 
Sbjct: 60  SYG-LSERQFRNLYIAATKVKEGTVGFNFMTLLEQRLDNVVFRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I S+R + G VI V++KS ++ ++LEA + A +    ++S + D +  T 
Sbjct: 119 HILVDGKRVDIPSFRVQPGQVISVREKSMKVPAILEAVE-ATKGRANFVSFDADKLEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   L+VEFY++
Sbjct: 178 VRLPERDE---INPEINEALIVEFYNK 201


>gi|303240945|ref|ZP_07327456.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2]
 gi|302591531|gb|EFL61268.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2]
          Length = 208

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR GE L+ +       K  V+ R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MARYTDASCRLCRREGEKLFLKGERCYTNKCSVSRRGYAPGQHGQGRKKLSEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++YYG + E +FR  F+ A   +G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKARRYYGVL-EGQFRKYFEMAVSKKGVTGDNLLQLLELRLDNVVYRLGLATSRPEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  VNG+ VNI SY  K GD I V +KSK    +   + + + + VP+++ ++ +
Sbjct: 119 LVRHGHFTVNGKKVNIPSYLTKLGDAIAVVEKSKSSPKIKAIADITSGKAVPKWLELDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+ +  V +PS  +DV  P+    NL+VE YS+
Sbjct: 179 NLTSKIVALPSR-EDVDLPLK--ENLIVELYSK 208


>gi|29377528|ref|NP_816682.1| 30S ribosomal protein S4 [Enterococcus faecalis V583]
 gi|227517321|ref|ZP_03947370.1| 30S ribosomal protein S4 [Enterococcus faecalis TX0104]
 gi|227554493|ref|ZP_03984540.1| 30S ribosomal protein S4 [Enterococcus faecalis HH22]
 gi|229547500|ref|ZP_04436225.1| 30S ribosomal protein S4 [Enterococcus faecalis TX1322]
 gi|229548076|ref|ZP_04436801.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 29200]
 gi|256618170|ref|ZP_05475016.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 4200]
 gi|256854748|ref|ZP_05560112.1| ribosomal protein S4 [Enterococcus faecalis T8]
 gi|256958352|ref|ZP_05562523.1| 30S ribosomal protein S4 [Enterococcus faecalis DS5]
 gi|256960421|ref|ZP_05564592.1| 30S ribosomal protein S4 [Enterococcus faecalis Merz96]
 gi|256962912|ref|ZP_05567083.1| 30S ribosomal protein S4 [Enterococcus faecalis HIP11704]
 gi|257078338|ref|ZP_05572699.1| 30S ribosomal protein S4 [Enterococcus faecalis JH1]
 gi|257080522|ref|ZP_05574883.1| 30S ribosomal protein S4 [Enterococcus faecalis E1Sol]
 gi|257083258|ref|ZP_05577619.1| 30S ribosomal protein S4 [Enterococcus faecalis Fly1]
 gi|257088187|ref|ZP_05582548.1| 30S ribosomal protein S4 [Enterococcus faecalis D6]
 gi|257091313|ref|ZP_05585674.1| 30S ribosomal protein S4 [Enterococcus faecalis CH188]
 gi|257417921|ref|ZP_05594915.1| 30S ribosomal protein S4 [Enterococcus faecalis T11]
 gi|257420473|ref|ZP_05597463.1| 30S ribosomal protein S4 [Enterococcus faecalis X98]
 gi|293383922|ref|ZP_06629824.1| ribosomal protein S4 [Enterococcus faecalis R712]
 gi|293388316|ref|ZP_06632830.1| ribosomal protein S4 [Enterococcus faecalis S613]
 gi|294780202|ref|ZP_06745574.1| ribosomal protein S4 [Enterococcus faecalis PC1.1]
 gi|300861437|ref|ZP_07107521.1| ribosomal protein S4 [Enterococcus faecalis TUSoD Ef11]
 gi|307270423|ref|ZP_07551724.1| ribosomal protein S4 [Enterococcus faecalis TX4248]
 gi|307273936|ref|ZP_07555148.1| ribosomal protein S4 [Enterococcus faecalis TX0855]
 gi|307276703|ref|ZP_07557820.1| ribosomal protein S4 [Enterococcus faecalis TX2134]
 gi|307278207|ref|ZP_07559289.1| ribosomal protein S4 [Enterococcus faecalis TX0860]
 gi|307286409|ref|ZP_07566515.1| ribosomal protein S4 [Enterococcus faecalis TX0109]
 gi|307292091|ref|ZP_07571958.1| ribosomal protein S4 [Enterococcus faecalis TX0411]
 gi|312901910|ref|ZP_07761173.1| ribosomal protein S4 [Enterococcus faecalis TX0470]
 gi|312905372|ref|ZP_07764487.1| ribosomal protein S4 [Enterococcus faecalis TX0635]
 gi|312906737|ref|ZP_07765737.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 512]
 gi|312910725|ref|ZP_07769564.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 516]
 gi|312953171|ref|ZP_07772018.1| ribosomal protein S4 [Enterococcus faecalis TX0102]
 gi|41017833|sp|Q82ZI6|RS4_ENTFA RecName: Full=30S ribosomal protein S4
 gi|29344995|gb|AAO82752.1| ribosomal protein S4 [Enterococcus faecalis V583]
 gi|227075191|gb|EEI13154.1| 30S ribosomal protein S4 [Enterococcus faecalis TX0104]
 gi|227176403|gb|EEI57375.1| 30S ribosomal protein S4 [Enterococcus faecalis HH22]
 gi|229306762|gb|EEN72758.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 29200]
 gi|229307342|gb|EEN73329.1| 30S ribosomal protein S4 [Enterococcus faecalis TX1322]
 gi|256597697|gb|EEU16873.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 4200]
 gi|256710308|gb|EEU25352.1| ribosomal protein S4 [Enterococcus faecalis T8]
 gi|256948848|gb|EEU65480.1| 30S ribosomal protein S4 [Enterococcus faecalis DS5]
 gi|256950917|gb|EEU67549.1| 30S ribosomal protein S4 [Enterococcus faecalis Merz96]
 gi|256953408|gb|EEU70040.1| 30S ribosomal protein S4 [Enterococcus faecalis HIP11704]
 gi|256986368|gb|EEU73670.1| 30S ribosomal protein S4 [Enterococcus faecalis JH1]
 gi|256988552|gb|EEU75854.1| 30S ribosomal protein S4 [Enterococcus faecalis E1Sol]
 gi|256991288|gb|EEU78590.1| 30S ribosomal protein S4 [Enterococcus faecalis Fly1]
 gi|256996217|gb|EEU83519.1| 30S ribosomal protein S4 [Enterococcus faecalis D6]
 gi|257000125|gb|EEU86645.1| 30S ribosomal protein S4 [Enterococcus faecalis CH188]
 gi|257159749|gb|EEU89709.1| 30S ribosomal protein S4 [Enterococcus faecalis T11]
 gi|257162297|gb|EEU92257.1| 30S ribosomal protein S4 [Enterococcus faecalis X98]
 gi|291078749|gb|EFE16113.1| ribosomal protein S4 [Enterococcus faecalis R712]
 gi|291082326|gb|EFE19289.1| ribosomal protein S4 [Enterococcus faecalis S613]
 gi|294452745|gb|EFG21175.1| ribosomal protein S4 [Enterococcus faecalis PC1.1]
 gi|295114399|emb|CBL33036.1| SSU ribosomal protein S4P [Enterococcus sp. 7L76]
 gi|300848898|gb|EFK76651.1| ribosomal protein S4 [Enterococcus faecalis TUSoD Ef11]
 gi|306496873|gb|EFM66423.1| ribosomal protein S4 [Enterococcus faecalis TX0411]
 gi|306502422|gb|EFM71695.1| ribosomal protein S4 [Enterococcus faecalis TX0109]
 gi|306505196|gb|EFM74384.1| ribosomal protein S4 [Enterococcus faecalis TX0860]
 gi|306506602|gb|EFM75755.1| ribosomal protein S4 [Enterococcus faecalis TX2134]
 gi|306509415|gb|EFM78473.1| ribosomal protein S4 [Enterococcus faecalis TX0855]
 gi|306513201|gb|EFM81832.1| ribosomal protein S4 [Enterococcus faecalis TX4248]
 gi|310627385|gb|EFQ10668.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 512]
 gi|310628914|gb|EFQ12197.1| ribosomal protein S4 [Enterococcus faecalis TX0102]
 gi|310631396|gb|EFQ14679.1| ribosomal protein S4 [Enterococcus faecalis TX0635]
 gi|311288988|gb|EFQ67544.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 516]
 gi|311290977|gb|EFQ69533.1| ribosomal protein S4 [Enterococcus faecalis TX0470]
 gi|315027687|gb|EFT39619.1| ribosomal protein S4 [Enterococcus faecalis TX2137]
 gi|315028229|gb|EFT40161.1| ribosomal protein S4 [Enterococcus faecalis TX4000]
 gi|315031243|gb|EFT43175.1| ribosomal protein S4 [Enterococcus faecalis TX0017]
 gi|315036538|gb|EFT48470.1| ribosomal protein S4 [Enterococcus faecalis TX0027]
 gi|315143294|gb|EFT87310.1| ribosomal protein S4 [Enterococcus faecalis TX2141]
 gi|315148889|gb|EFT92905.1| ribosomal protein S4 [Enterococcus faecalis TX4244]
 gi|315149065|gb|EFT93081.1| ribosomal protein S4 [Enterococcus faecalis TX0012]
 gi|315152920|gb|EFT96936.1| ribosomal protein S4 [Enterococcus faecalis TX0031]
 gi|315154776|gb|EFT98792.1| ribosomal protein S4 [Enterococcus faecalis TX0043]
 gi|315157493|gb|EFU01510.1| ribosomal protein S4 [Enterococcus faecalis TX0312]
 gi|315162550|gb|EFU06567.1| ribosomal protein S4 [Enterococcus faecalis TX0645]
 gi|315164504|gb|EFU08521.1| ribosomal protein S4 [Enterococcus faecalis TX1302]
 gi|315167181|gb|EFU11198.1| ribosomal protein S4 [Enterococcus faecalis TX1341]
 gi|315171025|gb|EFU15042.1| ribosomal protein S4 [Enterococcus faecalis TX1342]
 gi|315173453|gb|EFU17470.1| ribosomal protein S4 [Enterococcus faecalis TX1346]
 gi|315573361|gb|EFU85552.1| ribosomal protein S4 [Enterococcus faecalis TX0309B]
 gi|315578558|gb|EFU90749.1| ribosomal protein S4 [Enterococcus faecalis TX0630]
 gi|315581207|gb|EFU93398.1| ribosomal protein S4 [Enterococcus faecalis TX0309A]
 gi|323479004|gb|ADX78443.1| ribosomal protein S4 [Enterococcus faecalis 62]
 gi|327536193|gb|AEA95027.1| 30S ribosomal protein S4 [Enterococcus faecalis OG1RF]
 gi|329571122|gb|EGG52828.1| ribosomal protein S4 [Enterococcus faecalis TX1467]
          Length = 203

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYKPGQHGPNSRGKVSEYGMQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFRTLFIKASKIKEGKHGVNFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI V++KS+ ++++ EA + A    P ++S + + +  +F
Sbjct: 119 HITVDGKRVDIPSYHVEVGQVIGVREKSQNISTIKEAVE-ATVGRPAFVSFDTEKLEGSF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +  P    +   LVVE+Y
Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199


>gi|318040406|ref|ZP_07972362.1| 30S ribosomal protein S4 [Synechococcus sp. CB0101]
          Length = 202

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KS    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKSA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR V+I SY+CK GDV+ ++++ +         +     ++P ++ ++ + + A  
Sbjct: 117 VTVNGRVVDIPSYQCKAGDVVAIRERKQSKKLAEGNLEFPGLANIPPHLELDKNKLTAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      +     + +   LVVEFYSR
Sbjct: 177 IS---KCEREWVALEINELLVVEFYSR 200


>gi|270157887|ref|ZP_06186544.1| ribosomal protein S4 [Legionella longbeachae D-4968]
 gi|289163854|ref|YP_003453992.1| 30S ribosomal subunit protein S4 [Legionella longbeachae NSW150]
 gi|269989912|gb|EEZ96166.1| ribosomal protein S4 [Legionella longbeachae D-4968]
 gi|288857027|emb|CBJ10841.1| 30S ribosomal subunit protein S4 [Legionella longbeachae NSW150]
          Length = 206

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +               PG HG  +K + + +GLQLR KQ
Sbjct: 1   MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHG-DKKPRLNNYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K++++YG + EK+FR  +K A R +G T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRFYGVL-EKQFRGYYKMAARMKGATGENLMTLLERRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
            H+ +LVN + VN+ SY  K GDVI V+Q++K    +  A  L+E+ VP ++++V+  + 
Sbjct: 119 THKAILVNDKIVNVPSYLIKPGDVISVRQRAKNQGRIQAALALSEQRVPCDWLTVDTSSF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P+             NLVVE YS+
Sbjct: 179 KGTFSTAPT---LTDLSSDYNVNLVVELYSK 206


>gi|315038024|ref|YP_004031592.1| 30S ribosomal protein S4 [Lactobacillus amylovorus GRL 1112]
 gi|325956476|ref|YP_004291888.1| 30S ribosomal protein S4 [Lactobacillus acidophilus 30SC]
 gi|312276157|gb|ADQ58797.1| 30S ribosomal protein S4 [Lactobacillus amylovorus GRL 1112]
 gi|325333041|gb|ADZ06949.1| 30S ribosomal protein S4 [Lactobacillus acidophilus 30SC]
 gi|327183304|gb|AEA31751.1| 30S ribosomal protein S4 [Lactobacillus amylovorus GRL 1118]
          Length = 203

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  MYG-LNERQFRTLFARAGKIREGQHGVNFMILLERRLDNIVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G  I +K+KSK L  V +A   A    P ++S + + M  + 
Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDESLVVEYYNK 201


>gi|237734477|ref|ZP_04564958.1| 30S ribosomal protein S4 [Mollicutes bacterium D7]
 gi|229382297|gb|EEO32388.1| 30S ribosomal protein S4 [Coprobacillus sp. D7]
          Length = 201

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+G +     K  +N R+Y PG HGQ+RK +  Y GLQL  KQK++ 
Sbjct: 1   MSRYTGPQWKLSRRLGFSTLENGKE-LNKRAYAPGQHGQKRKKQTEY-GLQLAEKQKVRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+F + FK+A +  G   +N    LE RLD +VYR  F PT  AARQ VNH H
Sbjct: 59  MYG-VNEKQFHNTFKQAGKMEGIHGYNFFCLLERRLDNVVYRLGFAPTRRAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
            LVNG   +I S+R K GDVIEVK+KSK LA +  + + A    P ++ V+   +     
Sbjct: 118 FLVNGIKTDIPSFRVKVGDVIEVKEKSKNLAIIKASLE-ARVHTPAFVEVDDTKLTGKLA 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +  +L+VE+Y+R
Sbjct: 177 RLPERSE---LNQEINESLIVEYYNR 199


>gi|161507287|ref|YP_001577241.1| 30S ribosomal protein S4 [Lactobacillus helveticus DPC 4571]
 gi|172048222|sp|A8YUL2|RS4_LACH4 RecName: Full=30S ribosomal protein S4
 gi|160348276|gb|ABX26950.1| 30S ribosomal protein S4 [Lactobacillus helveticus DPC 4571]
 gi|328468696|gb|EGF39681.1| 30S ribosomal protein S4 [Lactobacillus helveticus MTCC 5463]
          Length = 203

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R  +   N +  LE RLD+IVYR     T   ARQ VNH 
Sbjct: 60  MYG-LNERQFRTLFTRAGKIREGEHGTNFMILLERRLDSIVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G  I +K+KSK L  V +A   A    P ++S + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201


>gi|154174170|ref|YP_001409132.1| 30S ribosomal protein S4 [Campylobacter curvus 525.92]
 gi|171769259|sp|A7H0Z0|RS4_CAMC5 RecName: Full=30S ribosomal protein S4
 gi|112802255|gb|EAT99599.1| ribosomal protein S4 [Campylobacter curvus 525.92]
          Length = 208

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR+G +L  +       KS ++ R Y PG HGQRR     Y GLQLR 
Sbjct: 1   MARYTGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQRRAKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FR +F+EA R  G+T   L+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-ISEKQFRRLFQEAARREGNTGALLVQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I SYR + G  +EV +KSK    ++ A  L A+  +  ++ V  D
Sbjct: 119 LVTHGHILVNGKRVDIPSYRVEPGSKVEVIEKSKNNPQIVRAIDLTAQTGIVGWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + +   + ++   +VE YS+
Sbjct: 179 KKFGIFTRNPEREEVI---IPIEERFIVELYSK 208


>gi|167756759|ref|ZP_02428886.1| hypothetical protein CLORAM_02306 [Clostridium ramosum DSM 1402]
 gi|167702934|gb|EDS17513.1| hypothetical protein CLORAM_02306 [Clostridium ramosum DSM 1402]
          Length = 216

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+G +     K  +N R+Y PG HGQ+RK +  Y GLQL  KQK++ 
Sbjct: 16  MSRYTGPQWKLSRRLGFSTLENGKE-LNKRAYAPGQHGQKRKKQTEY-GLQLAEKQKVRH 73

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+F + FK+A +  G   +N    LE RLD +VYR  F PT  AARQ VNH H
Sbjct: 74  MYG-VNEKQFHNTFKQAGKMEGIHGYNFFCLLERRLDNVVYRLGFAPTRRAARQLVNHGH 132

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
            LVNG   +I S+R K GDVIEVK+KSK LA +  + + A    P ++ V+   +     
Sbjct: 133 FLVNGIKTDIPSFRVKVGDVIEVKEKSKNLAIIKASLE-ARVHTPAFVEVDDTKLTGKLA 191

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +  +L+VE+Y+R
Sbjct: 192 RLPERSE---LNQEINESLIVEYYNR 214


>gi|78212331|ref|YP_381110.1| 30S ribosomal protein S4 [Synechococcus sp. CC9605]
 gi|123578565|sp|Q3ALH7|RS4_SYNSC RecName: Full=30S ribosomal protein S4
 gi|78196790|gb|ABB34555.1| ribosomal protein S4 [Synechococcus sp. CC9605]
          Length = 202

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++++           +     +VP ++ ++   + A  
Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKKLAEANLEFPGLANVPSHLELDKSKLSAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +     + +   LVVE+YSR
Sbjct: 177 TA---RCEREWVALEINELLVVEYYSR 200


>gi|227903670|ref|ZP_04021475.1| 30S ribosomal protein S4 [Lactobacillus acidophilus ATCC 4796]
 gi|227868557|gb|EEJ75978.1| 30S ribosomal protein S4 [Lactobacillus acidophilus ATCC 4796]
          Length = 235

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 33  MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 91

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD+IVYR     T   ARQ VNH 
Sbjct: 92  MYG-LNERQFRTLFIRAGKIREGQHGINFMILLERRLDSIVYRLGLATTREQARQLVNHG 150

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G  I +K KSK L  + +A + A    P ++S + + M  T 
Sbjct: 151 HITVDGKRVDIPSYEVSVGQTIGLKDKSKNLQQIRDALE-ATTARPSFVSFDENKMEGTL 209

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 210 VRLPERDEMEP---EIDESLVVEWYNK 233


>gi|297205789|ref|ZP_06923184.1| 30S ribosomal protein S4 [Lactobacillus jensenii JV-V16]
 gi|297148915|gb|EFH29213.1| 30S ribosomal protein S4 [Lactobacillus jensenii JV-V16]
          Length = 235

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G+QL  KQK++ 
Sbjct: 33  MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGEHGPNNRGRLSEYGMQLHEKQKLRW 91

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++FR++F  A + R  +   N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 92  MFG-LNERQFRNLFNRAGKIRQGEHGTNFMVLLERRLDNIVYRLGLATTREQARQLVNHG 150

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + + +  + 
Sbjct: 151 HILVDGKRVDIPSYEVKVGQEISLKEKSKNLQQVKDALE-AVVSRPSFVSFDENKLTGSL 209

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   LVVE+Y++
Sbjct: 210 VRLPERDEMEP---EINEALVVEYYNK 233


>gi|56480311|ref|NP_709084.2| 30S ribosomal protein S4 [Shigella flexneri 2a str. 301]
 gi|56383862|gb|AAN44791.2| 30S ribosomal subunit protein S4 [Shigella flexneri 2a str. 301]
          Length = 202

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           ++V GR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M  TF
Sbjct: 119 IMVPGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P           +  +L+VE YS+
Sbjct: 179 KRKPERSD---LSADINEHLIVELYSK 202


>gi|326332226|ref|ZP_08198506.1| ribosomal protein S4 [Nocardioidaceae bacterium Broad-1]
 gi|325949932|gb|EGD41992.1| ribosomal protein S4 [Nocardioidaceae bacterium Broad-1]
          Length = 202

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G   +    R Y PG HG+ R  +  Y  LQLR KQK + 
Sbjct: 1   MARYTGPMTRKSRRLGVDLVGND-AAFEKRPYPPGQHGRGRIKESEYL-LQLREKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F S + EA R  G T  NL+  LE RLD +VYRA F  T   ARQ V H H
Sbjct: 59  TYG-VMEKQFASYYAEAHRRDGKTGDNLLQLLEGRLDNVVYRAGFARTRRQARQLVVHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
            LVNG+ VN+ S++    DVI+V++KS ++   + A +   ER VP ++      M    
Sbjct: 118 FLVNGKKVNVPSFQVSAHDVIDVREKSLEMTPFIVARETHGERVVPAWLEAVPSRMRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE+YS+
Sbjct: 178 HQLPVRAQ---IDVPVQEQLIVEYYSK 201


>gi|32266901|ref|NP_860933.1| 30S ribosomal protein S4 [Helicobacter hepaticus ATCC 51449]
 gi|41017829|sp|Q7VGC0|RS4_HELHP RecName: Full=30S ribosomal protein S4
 gi|32262953|gb|AAP77999.1| ribosomal protein S4 [Helicobacter hepaticus ATCC 51449]
          Length = 208

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       K  ++ R YGPG HGQ+R     Y GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGISLALKGERRLAGKCALDKRPYGPGQHGQKRGKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR++FKEA+R  G+T  NL+  +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKIMYG-VSEKQFRALFKEANRQEGNTGENLVRIIEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I SY  K G  IEVK+KSK    V+ A  L ++  +  ++ V+ +
Sbjct: 119 LVTHGHILVNGKRVDIPSYMVKPGQKIEVKEKSKNNPQVIRAIDLTSQTGIVPWVDVDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++  L+VE YS+
Sbjct: 179 KKFGIFTRFPQREEVV---IPIEERLIVELYSK 208


>gi|282901762|ref|ZP_06309677.1| Ribosomal protein S4 [Cylindrospermopsis raciborskii CS-505]
 gi|281193379|gb|EFA68361.1| Ribosomal protein S4 [Cylindrospermopsis raciborskii CS-505]
          Length = 202

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+GE      KS    R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGELPGLTRKSA--RRAYAPGQHGQNRKKRSEY-AIRLEEKQKLRL 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     ++A R  G T   L+  LE RLD  V+R    PTI AARQ V+H H
Sbjct: 58  NYG-LTEKQMLRYVRKARRVTGSTGQVLLQLLEMRLDNTVFRLGMAPTISAARQLVSHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V +NGR VNI SY+C+ G+ I VK K      V    Q     ++P ++  + + +    
Sbjct: 117 VTINGRVVNIASYQCRPGEEIGVKDKEASRKLVENNLQYPGLANLPNHLEFDKNKLAGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIER---EWVALQVNELLVVEYYSR 200


>gi|268680562|ref|YP_003304993.1| ribosomal protein S4 [Sulfurospirillum deleyianum DSM 6946]
 gi|268618593|gb|ACZ12958.1| ribosomal protein S4 [Sulfurospirillum deleyianum DSM 6946]
          Length = 208

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR+G +L  +       KS ++ R Y PG HGQRR     Y GLQLR 
Sbjct: 1   MARYRGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQRRTKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR IF EA R  G+T  NL+  +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRIFDEAARREGNTGINLVLLIERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173
            V H H+LVNG  V+I SY  + GD +EV +KSK    +  A +L ++  +  ++ V  +
Sbjct: 119 LVTHGHILVNGNKVDIPSYIVRAGDKVEVCEKSKNNPQIKRALELTQQTGIAPWVDVERE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  F RIP   + V   + ++  L+VE YS+
Sbjct: 179 KAMGIFTRIPEREEVV---IPVEERLIVELYSK 208


>gi|327444033|gb|EGE90687.1| ribosomal protein S4 [Propionibacterium acnes HL043PA1]
 gi|327449433|gb|EGE96087.1| ribosomal protein S4 [Propionibacterium acnes HL043PA2]
          Length = 201

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  KS    R Y PG+HG+ R     Y  LQLR KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EADR++G T   L+  LESRLD +VY A    T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYLAGLAATRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR    D+I+V++KSK L  ++ A +  E RDVP ++ V  +      
Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + V   + +    +VE YS+
Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201


>gi|27904918|ref|NP_778044.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29611835|sp|P59491|RS4_BUCBP RecName: Full=30S ribosomal protein S4
 gi|27904316|gb|AAO27149.1| ribosomal protein S4 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 206

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR   +L+ +     ++++      PG HG +R  + S +G+QLR KQ
Sbjct: 1   MAKYLGPKLKLCRRENTDLFFKSGIRAIDSKCKFDQFPGQHGSKR-QRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E +FR+ +K A R +G+T  NL+  LE+RLD + YR  F  T   ARQ V
Sbjct: 60  KVRRLYG-ILEAQFRNYYKHASRLKGNTGENLLFLLENRLDNVTYRIGFGSTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +LVN  +VNI SY+   GDVI + + SK  + +  A +L+E R+ P +I V+ + M
Sbjct: 119 SHKSILVNNCTVNIPSYQVSPGDVISIHKNSKLQSRIKAALELSEQRETPIWIEVDFNKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + R+P           +   L++E YS+
Sbjct: 179 QGIYKRVPERSD---LSAEINEYLIIELYSK 206


>gi|302036692|ref|YP_003797014.1| 30S ribosomal protein S4 [Candidatus Nitrospira defluvii]
 gi|300604756|emb|CBK41088.1| 30S ribosomal protein S4 [Candidatus Nitrospira defluvii]
          Length = 208

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K      ++ RR GE L+ +       K  +  RSY PG HGQ R  + S + LQLR 
Sbjct: 1   MAKYSGPVCRLCRREGEKLFLKGSRCMTEKCAIERRSYPPGQHGQAR-QRTSDYSLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR IF+ A+R  G T   L+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKLKRIYG-LQECQFRGIFERAERQAGVTGDTLLRLLECRLDNVVYRLGFGASRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            VNH H+++NGR V       K GD +EV+QKS++L  +  A    + R +PE++ ++  
Sbjct: 119 LVNHGHMMINGRKVKAPGALVKAGDSVEVRQKSRELLPIQGALAAVDGRGIPEWLELDRT 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P+  + +  PV     +VVE YSR
Sbjct: 179 ACKGTIRSLPTK-EHIVLPV--NEQMVVELYSR 208


>gi|184153141|ref|YP_001841482.1| 30S ribosomal protein S4 [Lactobacillus reuteri JCM 1112]
 gi|226699080|sp|B2G6C0|RS4_LACRJ RecName: Full=30S ribosomal protein S4
 gi|183224485|dbj|BAG25002.1| 30S ribosomal protein S4 [Lactobacillus reuteri JCM 1112]
          Length = 201

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      ++ RR+G +L G  K  +  R+Y PG HG+ R+ K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWRVSRRLGVSLSGTVKE-LARRAYAPGDHGRDRRGKLSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + +  T   N ++ LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MTERQFSNLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G +I V+ KSK L  +  A + A    P Y+  + D +    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQIIAVRDKSKNLDIIKNAVE-AVVSRPSYVDFDADKLEGKL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP+          +   L+VEFY++
Sbjct: 178 NRIPAR---EDMNADIDEALIVEFYNK 201


>gi|168205206|ref|ZP_02631211.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987]
 gi|169347013|ref|ZP_02865955.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495]
 gi|169296696|gb|EDS78825.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495]
 gi|170663240|gb|EDT15923.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987]
          Length = 206

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR G  L+ +       K     RSY PG HG  RK   +Y G QLR 
Sbjct: 1   MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR+ ++ A++ RG    NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            VNH H LVNG+ V+I S++    DV+ V +KS+        ++   + +P+++  N +N
Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDVVTVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  P+  +D+  PV     L+VE YS+
Sbjct: 178 FEGKVVAEPAR-EDIDVPV--NETLIVELYSK 206


>gi|18311359|ref|NP_563293.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13]
 gi|110801306|ref|YP_697066.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124]
 gi|168215204|ref|ZP_02640829.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969]
 gi|168216659|ref|ZP_02642284.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239]
 gi|182626935|ref|ZP_02954668.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721]
 gi|26399584|sp|Q8XHV0|RS4A_CLOPE RecName: Full=30S ribosomal protein S4 A
 gi|123049591|sp|Q0TMS4|RS4A_CLOP1 RecName: Full=30S ribosomal protein S4 A
 gi|18146043|dbj|BAB82083.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13]
 gi|110675953|gb|ABG84940.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124]
 gi|170713408|gb|EDT25590.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969]
 gi|177907725|gb|EDT70340.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721]
 gi|182381248|gb|EDT78727.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239]
          Length = 206

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR G  L+ +       K     RSY PG HG  RK   +Y G QLR 
Sbjct: 1   MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR+ ++ A++ RG    NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            VNH H LVNG+ V+I S++    DVI V +KS+        ++   + +P+++  N +N
Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  P+  +D+  PV     L+VE YS+
Sbjct: 178 FEGKVVAEPAR-EDIDVPV--NETLIVELYSK 206


>gi|312877392|ref|ZP_07737357.1| ribosomal protein S4 [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795866|gb|EFR12230.1| ribosomal protein S4 [Caldicellulosiruptor lactoaceticus 6A]
          Length = 208

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MSK      ++ RR G  L+ +       K     R Y PG HGQ RK    Y G+QLR 
Sbjct: 1   MSKYIGPDCRLCRREGMKLFLKGDRCYTEKCAFARRPYPPGQHGQERKKLSEY-GMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL+S LE RLD +VYR  F  +   AR 
Sbjct: 60  KQKVKRIYGVL-ETQFRRYFEMAEKMKGIAGENLLSLLERRLDNVVYRLGFASSRGEARV 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  VNGR+VNI SY  K GD IEV ++SK     +E  +  A++  P+++  + +
Sbjct: 119 LVTHAHFKVNGRTVNIPSYLVKVGDEIEVDERSKSKTRFVEIKEKYAKKPSPKWLDKDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V   + +P+  +D+  P  ++ +L+VE YS+
Sbjct: 179 NLVGRVIALPTR-EDIDMP--IREHLIVELYSK 208


>gi|260102591|ref|ZP_05752828.1| 30S ribosomal protein S4 [Lactobacillus helveticus DSM 20075]
 gi|260083618|gb|EEW67738.1| 30S ribosomal protein S4 [Lactobacillus helveticus DSM 20075]
          Length = 203

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-IARRNYAPGQHGPNSRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R  +   N +  LE RLD+IVYR     T   ARQ VNH 
Sbjct: 60  MYG-LNERQFRTLFIRAGKIREGEHGTNFMILLERRLDSIVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G  I +K+KSK L  V +A   A    P ++S + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVSVGQTIGLKEKSKNLQQVKDALD-AVTARPSFVSFDDNKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201


>gi|167771240|ref|ZP_02443293.1| hypothetical protein ANACOL_02598 [Anaerotruncus colihominis DSM
           17241]
 gi|167666491|gb|EDS10621.1| hypothetical protein ANACOL_02598 [Anaerotruncus colihominis DSM
           17241]
          Length = 206

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR  + L+ +       K  V  R+  PG HG+ R  K S +G+QLRA
Sbjct: 1   MARYTGAVCRLCRRENKKLFLKGERCYTDKCAVTRRATVPGQHGKARTRKASEYGVQLRA 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ+ ++YYG I E +F   F+ A    G T  NL+   ESRLD +VYR  F  +   ARQ
Sbjct: 61  KQQARRYYG-ILESQFSKYFEMAAAKSGVTGENLLRICESRLDNVVYRLGFAASRKEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  VNG+  NI S   K GDV+ V  KS ++  V+EA     R V  ++  N  N
Sbjct: 120 LVRHGHFTVNGKKANIPSILLKAGDVVAVASKSDKIKGVVEA--FGSRPVARWLECNKTN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           M    + +P+        + ++ +L+VE YS+
Sbjct: 178 MTGRVIELPNR---EDIDLDVEEHLIVELYSK 206


>gi|260772120|ref|ZP_05881037.1| SSU ribosomal protein S4p (S9e) [Vibrio metschnikovii CIP 69.14]
 gi|260612987|gb|EEX38189.1| SSU ribosomal protein S4p (S9e) [Vibrio metschnikovii CIP 69.14]
          Length = 202

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 10/207 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  IYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNG  VN+ S+     DV+ +++K+K+ + +  A ++AE R+ P +I V+   M  TF
Sbjct: 119 ILVNGSVVNVPSFNVAANDVVAIREKAKKQSRIKAALEVAEQREKPTWIEVDASQMEGTF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P           +   L+VE YS+
Sbjct: 179 KRKPERSD---LSADINEQLIVELYSK 202


>gi|163847949|ref|YP_001635993.1| 30S ribosomal protein S4 [Chloroflexus aurantiacus J-10-fl]
 gi|222525829|ref|YP_002570300.1| 30S ribosomal protein S4 [Chloroflexus sp. Y-400-fl]
 gi|189045369|sp|A9WH92|RS4_CHLAA RecName: Full=30S ribosomal protein S4
 gi|254764579|sp|B9LJF8|RS4_CHLSY RecName: Full=30S ribosomal protein S4
 gi|163669238|gb|ABY35604.1| ribosomal protein S4 [Chloroflexus aurantiacus J-10-fl]
 gi|222449708|gb|ACM53974.1| ribosomal protein S4 [Chloroflexus sp. Y-400-fl]
          Length = 206

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++      K+ RR+G  +  +    +N RS  PG HG   R+ + S +G+QLR KQK K
Sbjct: 1   MARYIGPVGKVSRRLGIGITEKGLRILNKRSDPPGQHGAAARRRQLSDYGMQLREKQKAK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR +F++A R  G T   L+S LE RLD +VYR  F  T   ARQ VNH 
Sbjct: 61  FLYGVL-ERQFRRLFEQASRRSGVTGEYLLSLLERRLDNVVYRLGFATTRAQARQLVNHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMV 176
           H++V+GR  NI SY  K G VI V+ +S+             L +   PE++ +N   + 
Sbjct: 120 HIVVDGRKTNIPSYTVKVGQVIAVRPQSRSRTYFKNLVDSGVLNKHRAPEWLRLNAAELS 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T V +P           +   L+VEFYSR
Sbjct: 180 GTVVALPRR---EDAEAGINEQLIVEFYSR 206


>gi|163783136|ref|ZP_02178130.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881470|gb|EDP74980.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 211

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 6/211 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQ 56
           M +      K+DR+ G  + G+  +P  +  R++ PG HG+   R+ K S +G++L  KQ
Sbjct: 1   MGRYIGPWVKLDRKFGVVVSGKKSAPRIMQRRNFPPGQHGRTKGRRRKLSEYGIRLMEKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K  YG + EK+F+  F  A +S+ +T+  L+  LE RLD +VYR  F  T   ARQ V
Sbjct: 61  KLKYLYGGLREKQFKRYFDLAAKSKENTADVLLQLLERRLDNVVYRLGFATTRRQARQLV 120

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H H+LVNGR V+I  Y  + GD+IEVK  S+ +  + E  +  + R VPE++ ++ DN 
Sbjct: 121 AHGHILVNGRKVDIPHYEVEPGDIIEVKSSSRDIPFLKENLENIDPRSVPEWLELDKDNF 180

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++ P  + +    + +    ++EFYS+
Sbjct: 181 RGKVLKNPEGVAEY-LEIPINVQYIIEFYSK 210


>gi|11465685|ref|NP_053829.1| ribosomal protein S4 [Porphyra purpurea]
 gi|1710705|sp|P51219|RR4_PORPU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|1276685|gb|AAC08105.1| 30S ribosomal protein S4 [Porphyra purpurea]
          Length = 201

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G +L G  +  +  R Y PG HGQ+ + KPS + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRISRRLG-DLPGLSRKAI-KRPYPPGEHGQKPR-KPSEYAVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     K A + +G T   L+  LE RLD  ++R    PTI AARQ VNH H
Sbjct: 58  NYG-LSEKQLFKYVKAAKKLQGSTGQILLQLLEMRLDNTIFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + +NG+ V+I SY+CK G++I VK +      V          ++P ++ +N  N+    
Sbjct: 117 ICINGKVVSICSYQCKPGELITVKPQESSKQLVESYLAFPGLANIPSHLELNKSNLSGKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NGVIDR---EWVALQLNELLVVEYYSR 200


>gi|270291002|ref|ZP_06197225.1| 30S ribosomal protein S4 [Pediococcus acidilactici 7_4]
 gi|304385274|ref|ZP_07367619.1| 30S ribosomal protein S4 [Pediococcus acidilactici DSM 20284]
 gi|270280398|gb|EFA26233.1| 30S ribosomal protein S4 [Pediococcus acidilactici 7_4]
 gi|304328481|gb|EFL95702.1| 30S ribosomal protein S4 [Pediococcus acidilactici DSM 20284]
          Length = 202

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HGQ  + K S +G+QLR KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYAPGDHGQNNRRKISEYGMQLREKQKLRM 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-LTERQFANLFDRASKMREGVPGTNFMILLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI V++KSK L  + EA + A    P+++  + D +  + 
Sbjct: 119 HITVDGKRVDIPSYEVEIGQVIGVREKSKDLKIINEAVE-AVVGRPQFVQFDADKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +  +L+VE+Y++
Sbjct: 178 VRLPERDE---LEAEIDDSLIVEYYNK 201


>gi|300811296|ref|ZP_07091793.1| ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497660|gb|EFK32685.1| ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 203

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  RSY PG HG   + + S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYVPGQHGPNHRGRLSEYGMQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G +SE++FR++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MFG-LSERQFRTLFARAGKIREGQHGTNFMILLERRLDNVVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + D M    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +  P    +   LVVE+Y++
Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201


>gi|297625817|ref|YP_003687580.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921582|emb|CBL56136.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 201

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR G +L G  K     R Y PG+HG+ R     Y  LQL+ KQK + 
Sbjct: 1   MARYTGPMTKKSRRFGTDLVGNDK-AFERRPYAPGVHGRGRTKDSEY-SLQLKEKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   ++EA R  G T   L+  LESRLD +VYRA F  T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFHRYYEEASRRPGRTGDLLLQILESRLDNVVYRAGFASTRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI S+R    D+I+V+ KS+++   + A +   ERDVP +++V  + M    
Sbjct: 118 ILVNGKKVNIPSFRVAPLDIIDVRAKSQEMTPFVIARETFGERDVPGWLTVKPNKMRVLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + V   + +    +VE YSR
Sbjct: 178 HQLPTREQIV---LDVNEQEIVELYSR 201


>gi|257417204|ref|ZP_05594198.1| 30S ribosomal protein S4 [Enterococcus faecalis AR01/DG]
 gi|257159032|gb|EEU88992.1| 30S ribosomal protein S4 [Enterococcus faecalis ARO1/DG]
          Length = 203

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 72/205 (35%), Positives = 117/205 (57%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYKPGQHGPNSRGKVSEYGMQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFRTLFIKASKIKEGKHGVNFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI V++KS+ ++++ EA + +    P ++S + + +  +F
Sbjct: 119 HITVDGKRVDIPSYHVEVGQVIGVREKSQNISTIKEAVE-STVGRPAFVSFDTEKLEGSF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +  P    +   LVVE+Y
Sbjct: 178 TRLPERDELYP---EIDEALVVEYY 199


>gi|154249790|ref|YP_001410615.1| 30S ribosomal protein S4 [Fervidobacterium nodosum Rt17-B1]
 gi|171769361|sp|A7HM25|RS4_FERNB RecName: Full=30S ribosomal protein S4
 gi|154153726|gb|ABS60958.1| RNA-binding S4 domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 209

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +       K P + R + PG HG+ +K    Y  LQLRA
Sbjct: 1   MARNTGPLCKLCRREGMKLYLKGERCFSEKCPFDKRPFAPGQHGREKKKLTQY-ALQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ MK+ YG + EK+FR  ++ A +  GDT  NL++ +E RLD +VYR  F     AARQ
Sbjct: 60  KQTMKRIYGVL-EKQFRIYYERAVKQSGDTRENLVAQVERRLDNVVYRLGFAINRRAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V+H HVLVNG+ V+I SY+ + GDVI +K+ S+ +  + +A +L + R +  ++ V++D
Sbjct: 119 LVSHGHVLVNGKKVDIPSYQVRPGDVISIKEGSRTIEPIKQAIELNKGRAISNWLEVDYD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +VR P   + +  PV      +VEFYSR
Sbjct: 179 QFKGVYVRNPKLEEIIDLPV--NVQAIVEFYSR 209


>gi|300114712|ref|YP_003761287.1| 30S ribosomal protein S4 [Nitrosococcus watsonii C-113]
 gi|299540649|gb|ADJ28966.1| ribosomal protein S4 [Nitrosococcus watsonii C-113]
          Length = 208

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 127/212 (59%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQ-RRKSKPSYFGLQLRAK 55
           M+K    K K  RR G +L+ +    P++++      PG HG   R+++ S + LQLR K
Sbjct: 1   MAKYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGTRRARMSDYALQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++FR  +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKLRRMYGVL-ERQFRRYYKEAARRKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDN 174
           +NH+ +LVNG+ +NI SY+ +  DV+ V++K+K+   +  A +LA+ R   E++ +N   
Sbjct: 120 INHKGILVNGQGINIPSYQVRAEDVVAVREKAKKQDRIKFALELAQARTEAEWMEINAGK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F R+P   +  P    +Q NLVVE YS+
Sbjct: 180 LEGVFKRVPERSELAP---DIQENLVVELYSK 208


>gi|269837093|ref|YP_003319321.1| 30S ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745]
 gi|269786356|gb|ACZ38499.1| ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745]
          Length = 214

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/217 (38%), Positives = 122/217 (56%), Gaps = 14/217 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTR----SYGPGLHGQRRKSKPSYFGL 50
           M++      +I RR G  L+ +      PK P+  R    ++ PG HGQ+R  +PS +GL
Sbjct: 1   MARYTGPVCRICRREGMKLFLKGERCFGPKCPIVQRQPAKNFPPGQHGQKRTRRPSEYGL 60

Query: 51  QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
           QLR KQK+++ YG I E++FR  F+EA+R  G T  NL+  LE RLD +VYR  F  +  
Sbjct: 61  QLREKQKIRRMYG-IMERQFRRHFEEAERRGGVTGENLLQILEMRLDNVVYRLGFADSRN 119

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYIS 169
            ARQ V H H  VNGR  NI S+  K GDV+ V+ +S++       ++ A  + VPE+IS
Sbjct: 120 QARQLVRHGHFTVNGRKTNIPSFIVKPGDVVAVRPQSREREYFKIVAETAGSKQVPEWIS 179

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + +++    +  P+  +    P      LVVEFYSR
Sbjct: 180 RDMESLSGRIINAPTPDQIERPP--FNEQLVVEFYSR 214


>gi|116511114|ref|YP_808330.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris SK11]
 gi|125623168|ref|YP_001031651.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|122940375|sp|Q032G4|RS4_LACLS RecName: Full=30S ribosomal protein S4
 gi|152060956|sp|A2RI10|RS4_LACLM RecName: Full=30S ribosomal protein S4
 gi|116106768|gb|ABJ71908.1| SSU ribosomal protein S4P [Lactococcus lactis subsp. cremoris SK11]
 gi|124491976|emb|CAL96903.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300069915|gb|ADJ59315.1| 30S ribosomal protein S4 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 203

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQSRRYGISLTGSGKE-IARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG +SE++FR+++  A + +  T  +N ++ LE RLD +VYR     T   ARQFVNH 
Sbjct: 60  TYG-LSERQFRNLYVAATKVKEGTVGYNFMTLLEQRLDNVVYRLGLATTRRQARQFVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I S+R + G VI V++KS ++ ++LEA + A +    ++S + D +  T 
Sbjct: 119 HILVDGKRVDIPSFRVQPGQVISVREKSMKVPAILEAVE-ATKGRANFVSFDADKLEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +   L+VEFY++
Sbjct: 178 VRLPERDE---INPEINDALIVEFYNK 201


>gi|254495736|ref|ZP_05108651.1| 30S ribosomal protein S4 [Legionella drancourtii LLAP12]
 gi|254355049|gb|EET13669.1| 30S ribosomal protein S4 [Legionella drancourtii LLAP12]
          Length = 206

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +               PG HG ++     Y G+QLR KQ
Sbjct: 1   MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNGY-GIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR  +K A R +G T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRLYGVL-EKQFRGYYKMAARMKGSTGENLMTLLEKRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
            H+ +LVN + VN+ S+    GDV+ V+QK+K    +  A  L+E+  P ++I+V+  + 
Sbjct: 119 THKAILVNDKVVNVPSFLVSPGDVVTVRQKAKSQGRIQAALALSEQRAPCDWITVDSSSF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P+             NLVVE YS+
Sbjct: 179 KGTFSTAPT---LTDLSSDYNVNLVVELYSK 206


>gi|309789644|ref|ZP_07684225.1| ribosomal protein S4 [Oscillochloris trichoides DG6]
 gi|308228380|gb|EFO82027.1| ribosomal protein S4 [Oscillochloris trichoides DG6]
          Length = 238

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           M++      K+ RR+G  +  + +  +N RSY PG HG   R+ + S +GLQL  KQK K
Sbjct: 33  MARYNGPVGKVSRRLGIGITEKGQRILNKRSYPPGQHGPNARRRQVSDYGLQLLEKQKAK 92

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR IF++A R  G T   L+S LE RLD +VYR     T   ARQ V H 
Sbjct: 93  FIYGVL-ERQFRRIFEQAARRSGVTGEYLLSLLERRLDNVVYRLGMATTRAQARQLVTHG 151

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV---PEYISVNHDNMV 176
           H++V+GR  NI S+  K G VI V+ +S++ A         + +    P+++ ++  ++ 
Sbjct: 152 HIMVDGRKTNIPSFTLKVGQVISVRPESRRRAYFKNLVDSGDLNKYRAPDWLRLDAADLS 211

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T + +P           +   L+VEFYSR
Sbjct: 212 GTVIALPRR---EDAEAGINEQLIVEFYSR 238


>gi|104773806|ref|YP_618786.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|122983978|sp|Q1GAV4|RS4_LACDA RecName: Full=30S ribosomal protein S4
 gi|152060954|sp|Q04B92|RS4_LACDB RecName: Full=30S ribosomal protein S4
 gi|103422887|emb|CAI97549.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125470|gb|ADY84800.1| 30s ribosomal protein S4 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 203

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  RSY PG HG   + + S +G+QL+ KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYIPGQHGPNHRGRLSEYGMQLQEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++FR++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MFG-LNERQFRTLFARAGKIREGQHGTNFMILLERRLDNVVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + D M    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +  P    +   LVVE+Y++
Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201


>gi|319789265|ref|YP_004150898.1| ribosomal protein S4 [Thermovibrio ammonificans HB-1]
 gi|317113767|gb|ADU96257.1| ribosomal protein S4 [Thermovibrio ammonificans HB-1]
          Length = 208

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLW------GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +    K +I RR+G N++       + KS ++ R Y PG HG+ R+ K SY+G QL  
Sbjct: 1   MGRYTGPKWRIARRLGVNIYVGEEKSQKGKSILDRRPYPPGQHGRSRR-KISYYGRQLME 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K YYG + E++FR  ++ A+R RG T  NL+  LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQKVKYYYG-VREEQFRRFYEMAERMRGQTGENLLKLLESRLDNVVYRLGFGKSHRHARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+LVNG+ V+  SY  K GDVIEVK+KS+ +  + E  +LA+ R +P ++ ++ +
Sbjct: 119 LVVHGHILVNGKKVDRPSYLVKPGDVIEVKEKSRDIPQIKEGMELAQRRGIPSWLELDPE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N        P+  +          +L+VE YS+
Sbjct: 179 NFKGVVKAEPTREEIEIPIEE---HLIVELYSK 208


>gi|256420685|ref|YP_003121338.1| ribosomal protein S4 [Chitinophaga pinensis DSM 2588]
 gi|256035593|gb|ACU59137.1| ribosomal protein S4 [Chitinophaga pinensis DSM 2588]
          Length = 201

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++    K KI R  GE + G  K  +   S  PG HG  R++ +   + LQLR KQK K
Sbjct: 1   MARYTGPKTKISRIFGEPILGNGKY-LGKNSNPPGQHGVSRKRKQLGEYALQLREKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++F ++F EA+R +G T   LI  LE+RLD  V+R    P+  AARQ V+H+
Sbjct: 60  YTYGVL-ERQFANLFVEANRRKGVTGEVLIKLLEARLDNAVFRLGIAPSRPAARQLVSHK 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ +N+ SY+ K GD+I +K  +    ++    +        ++  N   +  TF
Sbjct: 119 HITVNGQVMNVPSYQLKPGDIIGLKASATTNTAITSNIRGKNPKF-SWLDWNEKELKGTF 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P        P  ++  L+VE YS+
Sbjct: 178 IAYPER---ESVPENIKEQLIVELYSK 201


>gi|307154043|ref|YP_003889427.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 7822]
 gi|306984271|gb|ADN16152.1| ribosomal protein S4 [Cyanothece sp. PCC 7822]
          Length = 202

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLTRKNA--RRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     ++A R+ G T   L+  LE RLD  ++R     TI AARQ VNH H
Sbjct: 58  NYG-VSEKQLIRYVRKARRATGSTGQVLLQLLEMRLDNTIFRLGMAGTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN + V+I SY+C+ GDVI+VK + +    V    +     ++P ++  + +  +   
Sbjct: 117 ILVNDQVVDIASYQCRPGDVIKVKNQERSRKLVEANMEYPGLANLPSHLEFDKNTFIGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVEFYSR
Sbjct: 177 NGVIER---EWIALNINELLVVEFYSR 200


>gi|116075050|ref|ZP_01472310.1| 30S ribosomal protein S4 [Synechococcus sp. RS9916]
 gi|116067247|gb|EAU73001.1| 30S ribosomal protein S4 [Synechococcus sp. RS9916]
          Length = 202

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQDGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++++           +     +VP ++ ++   + A  
Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKKLAEANLEFPGLANVPPHLELDKSKLSAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      +     + +   LVVE+YSR
Sbjct: 177 I---GRSEREWVALEINELLVVEYYSR 200


>gi|108758664|ref|YP_631524.1| 30S ribosomal protein S4 [Myxococcus xanthus DK 1622]
 gi|122981072|sp|Q1D749|RS4A_MYXXD RecName: Full=30S ribosomal protein S4 A
 gi|108462544|gb|ABF87729.1| ribosomal protein S4 [Myxococcus xanthus DK 1622]
          Length = 208

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++  +S  +I RR    ++ +       K  +  R Y PG HGQ R     Y G+QLR 
Sbjct: 1   MARYTASACRICRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGRVKFSGY-GVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  +  A  ++G T  NL+  LE RLD +V+R  F  T   ARQ
Sbjct: 60  KQKVKRMYG-LLENQFRGYYHRASAAKGKTGDNLLQQLELRLDNVVFRMGFADTRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNGR VNI S+  K G  +EV +KS+++  + EA +  + R +P++IS++  
Sbjct: 119 LVRHGHFQVNGRKVNIPSFAVKPGTAVEVVEKSRKVLRISEALETVDRRGIPQWISLDKK 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P+  +D+  P+     L+VE YS+
Sbjct: 179 AFKGTVTTVPNR-EDLTMPIS--EQLIVELYSK 208


>gi|258508250|ref|YP_003171001.1| 30S ribosomal protein S4P [Lactobacillus rhamnosus GG]
 gi|258539461|ref|YP_003173960.1| 30S ribosomal protein S4P [Lactobacillus rhamnosus Lc 705]
 gi|257148177|emb|CAR87150.1| SSU/30S ribosomal protein S4P [Lactobacillus rhamnosus GG]
 gi|257151137|emb|CAR90109.1| SSU/30S ribosomal protein S4P [Lactobacillus rhamnosus Lc 705]
 gi|259649567|dbj|BAI41729.1| 30S ribosomal protein S4 [Lactobacillus rhamnosus GG]
          Length = 203

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G +L G  K  +  R Y PG HG   + K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F  A + +  T   N +  LE+RLD +V+R     +   ARQ VNH 
Sbjct: 60  MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ ++I SY  + G VI ++++S+ LA V EA +      P Y++ + +    + 
Sbjct: 119 HITVDGKRLDIPSYEVQPGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +  P    +  +LVVE+Y
Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199


>gi|33866226|ref|NP_897785.1| 30S ribosomal protein S4 [Synechococcus sp. WH 8102]
 gi|41017824|sp|Q7U5K9|RS4_SYNPX RecName: Full=30S ribosomal protein S4
 gi|33639201|emb|CAE08209.1| 30S ribosomal protein S4 [Synechococcus sp. WH 8102]
          Length = 202

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MARYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDV+ ++++           +     +VP ++ ++   + A  
Sbjct: 117 VTVNGRVTDIASYQCKPGDVVAIRERKCSKQLAEGNLEFPGLANVPTHLELDKAKLSAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +     + +   LVVE+YSR
Sbjct: 177 T---GRCEREWVALEINELLVVEYYSR 200


>gi|90994410|ref|YP_536900.1| ribosomal protein S4 [Porphyra yezoensis]
 gi|122194732|sp|Q1XDR8|RR4_PORYE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|90818974|dbj|BAE92343.1| 30S ribosomal protein S4 [Porphyra yezoensis]
          Length = 201

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G +L G  +  +  RSY PG HGQ+ + KPS + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRISRRLG-DLPGLSRKAI-KRSYPPGEHGQKSR-KPSEYAVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     K A + +G T   L+  LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-LSEKQLFKYVKAAKKLQGSTGQILLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + +NG+ V+I SY+CK G+ I VK +      V          ++P ++ +N  N+    
Sbjct: 117 ICINGQVVSICSYQCKPGESISVKNQEASRKLVENYLAFPGLANIPSHLELNKSNLSGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LV+E+YSR
Sbjct: 177 NGVIDR---EWVALQLNELLVIEYYSR 200


>gi|157164972|ref|YP_001467696.1| 30S ribosomal protein S4 [Campylobacter concisus 13826]
 gi|171855075|sp|A7ZFY8|RS4_CAMC1 RecName: Full=30S ribosomal protein S4
 gi|112800789|gb|EAT98133.1| ribosomal protein S4 [Campylobacter concisus 13826]
          Length = 208

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR+G +L  +       KS +  R Y PG HGQRR     Y GLQLR 
Sbjct: 1   MARYTGPVEKLERRLGVSLALKGERRLAGKSALEKRPYAPGQHGQRRAKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F+EA R  G+T   L+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFQEAARREGNTGALLVQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I SYR + G  +EV +KSK    ++ A  L A+  +  ++ V  +
Sbjct: 119 LVTHGHILVNGKRVDIPSYRVEPGSKVEVAEKSKNNPQIVRAIDLTAQTGIVAWVDVEKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + +   + ++   +VE YS+
Sbjct: 179 KKFGIFTRNPEREEVI---IPVEERFIVELYSK 208


>gi|157737265|ref|YP_001489948.1| 30S ribosomal protein S4 [Arcobacter butzleri RM4018]
 gi|315636982|ref|ZP_07892206.1| 30S ribosomal protein S4 [Arcobacter butzleri JV22]
 gi|172045648|sp|A8ETK5|RS4_ARCB4 RecName: Full=30S ribosomal protein S4
 gi|157699119|gb|ABV67279.1| 30S ribosomal protein S4 [Arcobacter butzleri RM4018]
 gi|315478812|gb|EFU69521.1| 30S ribosomal protein S4 [Arcobacter butzleri JV22]
          Length = 208

 Score =  202 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR+  +L  +       KS +  R + PG HGQRR     Y GLQLR 
Sbjct: 1   MARYRGPVEKIERRLDADLGLKGERRLSGKSALEKRPFAPGQHGQRRAKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K  YG ISEK+FR+ FKEA R  G+T   LIS +E RLD +V+R  F  T   ARQ
Sbjct: 60  KQKVKFMYG-ISEKQFRNYFKEAVRREGNTGAILISLIEQRLDNVVFRMGFATTRANARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
           F  H HVLV+G+ V+I SY  K G  IE+K+KSK    V+ A +L  +  + ++++V+ D
Sbjct: 119 FTTHGHVLVDGKKVDIPSYLVKPGQKIEIKEKSKSNPQVVRALELTNQTGMVDWVNVDKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F RIP+  + V   + ++  L+VE YS+
Sbjct: 179 KVFGIFTRIPAREEVV---IPVEERLIVELYSK 208


>gi|147676683|ref|YP_001210898.1| 30S ribosomal protein S4 [Pelotomaculum thermopropionicum SI]
 gi|189045389|sp|A5D5E8|RS4_PELTS RecName: Full=30S ribosomal protein S4
 gi|146272780|dbj|BAF58529.1| ribosomal protein S4 and related proteins [Pelotomaculum
           thermopropionicum SI]
          Length = 208

 Score =  202 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR G  L+ +      PK  ++ RSY PG HGQ RK    Y GLQLR 
Sbjct: 1   MARYTGSVCRLCRREGLKLYLKGDRCYTPKCAIDRRSYAPGQHGQGRKKVSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E +FR  F++A+R  G T  NL+  LE RLD ++YR     +   ARQ
Sbjct: 60  KQKARRIYG-ILESQFRRYFEKAERQPGITGENLLRLLERRLDNVIYRLGLGASRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  VNGR VNI SY  K GDVI V+ +SK+   + E  +  A+R  P ++    D
Sbjct: 119 LVRHGHFTVNGRRVNIPSYLVKPGDVIAVRDQSKESPRIKELLERAADRTPPAWLEYEAD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              A    +P+  +       +Q +L+VE YSR
Sbjct: 179 QARARVAALPARDQ---IDAPVQEHLIVELYSR 208


>gi|110801849|ref|YP_699635.1| 30S ribosomal protein S4 [Clostridium perfringens SM101]
 gi|122956505|sp|Q0SQH2|RS4A_CLOPS RecName: Full=30S ribosomal protein S4 A
 gi|110682350|gb|ABG85720.1| 30S ribosomal protein S4 [Clostridium perfringens SM101]
          Length = 206

 Score =  202 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR G  L+ +       K     RSY PG HG  RK   +Y G QLR 
Sbjct: 1   MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR+ ++ A++ RG    NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            VNH H LVNG+ V+I S++    DVI V +KS+        ++   + +P+++  N +N
Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  P+  +D+  PV     L+VE YS+
Sbjct: 178 FEGKVIAEPAR-EDIDVPV--NETLIVELYSK 206


>gi|314982287|gb|EFT26380.1| ribosomal protein S4 [Propionibacterium acnes HL110PA3]
          Length = 201

 Score =  202 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  KS    R Y PG+HG+ R     Y  LQLR KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGTDLVGNDKS-FERRPYPPGVHGRGRTKDSEY-SLQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EADR++G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  AYGVL-EKQFRRYYEEADRAQGKTGDVLLQILESRLDNVVYRAGLAATRRQARQKVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR    D+I+V++KSK L  ++ A +  E RDVP ++ V  +      
Sbjct: 118 FLVNGKKVNIPSYRVSTHDIIDVREKSKDLPPIVIARETFETRDVPAWLEVRPNKGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  + V   + +    +VE YS+
Sbjct: 178 HQLPTRDQIV---IDVNEQAIVELYSK 201


>gi|22297691|ref|NP_680938.1| 30S ribosomal protein S4 [Thermosynechococcus elongatus BP-1]
 gi|26399368|sp|P59134|RS4_THEEB RecName: Full=30S ribosomal protein S4
 gi|22293868|dbj|BAC07700.1| 30S ribosomal protein S4 [Thermosynechococcus elongatus BP-1]
          Length = 202

 Score =  202 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I RR+GE      K P   RSY PG HGQ RK +  Y  L+L  KQK++ 
Sbjct: 1   MARYRGPRLRIVRRLGELAGLTRKVP--KRSYPPGQHGQARKKRSEY-ALRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     ++A R  G T   L+  LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVRKARRVSGSTGQTLLQLLEMRLDNTVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR+V+I SY+C+ GDVI V+   +    V    Q     ++P ++ ++   +    
Sbjct: 117 ILVNGRNVSIPSYQCRPGDVITVRDNERSRRLVETNLQNPGLANLPSHLELDKSTLTGRV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   LVVE+YSR
Sbjct: 177 TGIVERQ---WVALEVNELLVVEYYSR 200


>gi|116333868|ref|YP_795395.1| 30S ribosomal protein S4 [Lactobacillus brevis ATCC 367]
 gi|122269445|sp|Q03R08|RS4_LACBA RecName: Full=30S ribosomal protein S4
 gi|116099215|gb|ABJ64364.1| SSU ribosomal protein S4P [Lactobacillus brevis ATCC 367]
          Length = 201

 Score =  202 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G +L G  K  +N R Y PG HGQ R+ K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWRISRRLGVSLSGTGKE-LNRRPYAPGDHGQGRRQKLSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++FK A + +  T   N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  TYG-MTERQFYNLFKRAGKIKEGTHGTNFMILLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G VI V++KSK +A +  A + A    P+Y+  + D +  + 
Sbjct: 119 HITVDGQRVDIPSYEVKIGQVISVREKSKDMAIIKGAVE-AVVGRPQYVEFDADKLAGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +       +  +L+VE+Y+R
Sbjct: 178 TRFPQREE---LDAELDDSLIVEYYNR 201


>gi|320160440|ref|YP_004173664.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1]
 gi|319994293|dbj|BAJ63064.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1]
          Length = 212

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 76/216 (35%), Positives = 109/216 (50%), Gaps = 14/216 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHG---QRRKSKPSYFGLQ 51
           M K      K+ RR GE L+ +      PK     R + PG HG   Q R  + S +  Q
Sbjct: 1   MGKYLGPVCKLCRREGEKLFLKGERCYSPKCSFEKRGFAPGQHGRTQQGRSERESDYARQ 60

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           LRAKQK ++ YG I E++FR  F  A R +G T  NL+  LE RLD +V+R  F  +   
Sbjct: 61  LRAKQKARRVYG-IFERQFRRYFGLALRKKGLTGLNLLQTLEMRLDNVVFRMGFASSRAQ 119

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISV 170
           ARQ VNH H+ VN    +I S   K GD+I VK+ ++ L    +   + +R   P +I  
Sbjct: 120 ARQLVNHGHIQVNNHRADIPSMLVKPGDIISVKESARSLTYWKDLLDVVDRRTCPMWIDR 179

Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  N+    +R+P   +       +   L+VE+YSR
Sbjct: 180 DTKNLSGRILRLPERSE---IDGNLNEQLIVEYYSR 212


>gi|94985941|ref|YP_605305.1| 30S ribosomal protein S4 [Deinococcus geothermalis DSM 11300]
 gi|152060945|sp|Q1IX98|RS4_DEIGD RecName: Full=30S ribosomal protein S4
 gi|94556222|gb|ABF46136.1| ribosomal protein S4 [Deinococcus geothermalis DSM 11300]
          Length = 206

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 120/210 (57%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           M +   S  K+ RR G NL    K    ++ R Y PG HGQRR + +PS + ++LR KQK
Sbjct: 1   MGRFRGSITKLSRREGINLAETEKVQKYLDRRPYAPGQHGQRRGRGRPSDYSVRLREKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           + + YG ++EK+FR++F+EA    G T    +  LE RLD +V+R  F  T   ARQFV 
Sbjct: 61  LARLYG-VNEKQFRNLFEEAANVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVG 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMV 176
           H H+LVNG+ V+I SYR + GD I V + S+ +  + E  +    R V  +I +N D   
Sbjct: 120 HGHILVNGKRVDIPSYRVRIGDEISVAEGSRSMGFIQENMEAQKRRRVSPWIELNPDTFT 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            TFVR+P+        + +  N ++E+YSR
Sbjct: 180 GTFVRLPAR---EDLALPINENFIIEYYSR 206


>gi|288818043|ref|YP_003432390.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
 gi|288787442|dbj|BAI69189.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
 gi|308751644|gb|ADO45127.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
          Length = 209

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 8/211 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP--KSPVNTRSYGPGLHGQ--RRKSKPSYFGLQLRAKQ 56
           MS+      K+DRR G  L  R      ++ R++ PG HG+   RK K + FGL+L  KQ
Sbjct: 1   MSRYIGPWSKVDRRFGAVLSNRKSAGKVLSRRNFPPGQHGRVKGRKRKLTEFGLRLMEKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K  YG + EK+FR  F+EA +++G+T   L+  LE RLD +VYR     T   ARQ +
Sbjct: 61  KLKFLYGGLREKQFRRYFEEASKAKGNTGQVLLQLLERRLDNVVYRLGMAVTRRQARQMI 120

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H H+LVNG+ V+I SYR + GD+IE+K  S+ +   +E  Q  + R +P ++ ++ +N 
Sbjct: 121 AHGHILVNGKKVDIPSYRVQVGDIIELKPASRDVPQFIENIQSIDPRSIPPWLELDKENF 180

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + +P   K+V   V +    V+EFYSR
Sbjct: 181 RGKVIDLP---KEVELEVPVNVQYVIEFYSR 208


>gi|227877293|ref|ZP_03995366.1| ribosomal protein S4 [Lactobacillus crispatus JV-V01]
 gi|227863149|gb|EEJ70595.1| ribosomal protein S4 [Lactobacillus crispatus JV-V01]
          Length = 221

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 19  MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 77

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 78  MYG-LNERQFRTLFTRAGKIREGQHGVNFMILLERRLDSLVYRLGLATTREQARQLVNHG 136

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + + M  T 
Sbjct: 137 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALE-AVTARPSFVSFDENKMEGTL 195

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   LVVE+Y++
Sbjct: 196 VRLPERDEMEP---EIDEALVVEWYNK 219


>gi|300864160|ref|ZP_07109054.1| 30S ribosomal protein S4 [Oscillatoria sp. PCC 6506]
 gi|300337850|emb|CBN54200.1| 30S ribosomal protein S4 [Oscillatoria sp. PCC 6506]
          Length = 202

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KSP   R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRKSP--RRAYPPGQHGQNRKKRSEY-AVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     ++A R  G T   L+  LE RLD  V+R    PTI AARQ VNH H
Sbjct: 58  NYG-ISERQLLRYVRKARRVTGSTGQVLLQMLEMRLDNTVFRMGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VN R+V+I S++CK GDV+ VK   +    V    +      +P ++  +   +V   
Sbjct: 117 VTVNDRTVDIASFQCKPGDVVAVKNTERSRLLVEANLKYPGLAHLPSHLEFDKQKLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 NGTVER---EWIALQVNELLVVEYYSR 200


>gi|168211877|ref|ZP_02637502.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626]
 gi|170710184|gb|EDT22366.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626]
          Length = 206

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR G  L+ +       K     RSY PG HG  RK   +Y G QLR 
Sbjct: 1   MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNY-GTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR+ ++ A++ RG    NL+  LE RLD +VYR  +  +   ARQ
Sbjct: 60  KQKAKRIYGVL-EGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            VNH H LVNG+ V+I S++    D I V +KS+        ++   + +P+++  N +N
Sbjct: 119 LVNHGHFLVNGKKVDIASFKVSVNDFITVCEKSRGSERFKMFAENP-KALPKWLEANVEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  P+  +D+  PV     L+VE YS+
Sbjct: 178 FEGKVVAEPAR-EDIDVPV--NETLIVELYSK 206


>gi|86158343|ref|YP_465128.1| 30S ribosomal protein S4 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|197122365|ref|YP_002134316.1| 30S ribosomal protein S4 [Anaeromyxobacter sp. K]
 gi|220917147|ref|YP_002492451.1| RNA-binding S4 domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|123497980|sp|Q2IJ65|RS4_ANADE RecName: Full=30S ribosomal protein S4
 gi|226697798|sp|B4UBC5|RS4_ANASK RecName: Full=30S ribosomal protein S4
 gi|254764563|sp|B8J886|RS4_ANAD2 RecName: Full=30S ribosomal protein S4
 gi|85774854|gb|ABC81691.1| SSU ribosomal protein S4P [Anaeromyxobacter dehalogenans 2CP-C]
 gi|196172214|gb|ACG73187.1| RNA-binding S4 domain protein [Anaeromyxobacter sp. K]
 gi|219955001|gb|ACL65385.1| RNA-binding S4 domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 208

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR    ++ +       K  +  R Y PG HGQ R +K S +G+QLR 
Sbjct: 1   MARYSESVCRLCRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGR-TKFSEYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E  FR  ++ A  ++G T  NL+  LE RLD +V+R  F  T   ARQ
Sbjct: 60  KQKVKRMYG-LLEAGFRHAYQNAAAAKGKTGENLLQTLELRLDNVVFRLGFADTRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNGR VNI SY C+ GD +E+K +SK++  + EA +  + R VP ++ ++  
Sbjct: 119 LVRHGHFKVNGRKVNIPSYLCRPGDKVELKDRSKKVVRITEALEAVDRRGVPAWLDLDKG 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T    P+  +D+  P  +Q  L+VE YS+
Sbjct: 179 GFKGTVKTSPAR-EDITMP--IQEQLIVELYSK 208


>gi|326803755|ref|YP_004321573.1| ribosomal protein S4 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650742|gb|AEA00925.1| ribosomal protein S4 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 203

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+      K  RR G +L G  K  +  R Y PG HG   R+   S +GLQL+ KQK++
Sbjct: 1   MSRYTGPSWKKSRRYGISLSGTGKE-LARRPYAPGQHGPNQRRKSLSEYGLQLQEKQKLR 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
             YG ++EK+F +++  A++ +  T   N ++ LE RLD +VYR     T   ARQ V+H
Sbjct: 60  FIYG-LTEKQFHNLYNRAEKIKEGTVGTNFMTLLEQRLDNMVYRLGLASTRRQARQLVSH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+ V+G+ V+I SY  + G VI V++KSK L  + ++ +     VP Y+  + D +  +
Sbjct: 119 GHITVDGKRVDIPSYIVEVGQVIGVREKSKNLQVIKDSVEGLYGHVP-YVEFDADKLEGS 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFY 204
             R+P   +       +  +LVVE+Y
Sbjct: 178 LSRLPERDE---MNQEIDESLVVEYY 200


>gi|219849861|ref|YP_002464294.1| 30S ribosomal protein S4 [Chloroflexus aggregans DSM 9485]
 gi|254764578|sp|B8G6P9|RS4_CHLAD RecName: Full=30S ribosomal protein S4
 gi|219544120|gb|ACL25858.1| ribosomal protein S4 [Chloroflexus aggregans DSM 9485]
          Length = 206

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMK 59
           M++      K+ RR+G  +  + +  +N R   PG HG   R+   S +G QLR KQK K
Sbjct: 1   MARFRGPVGKVSRRLGIGITEKGQRILNKRPDPPGQHGAAARRRALSDYGAQLREKQKAK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E++FR +F++A R  G T   L+S LE RLD +VYR  F  T   ARQ VNH 
Sbjct: 61  FIYGVL-ERQFRRLFEQAARRSGVTGEYLLSLLERRLDNVVYRLGFATTRAQARQLVNHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMV 176
           H++V+GR  NI SY  K G VI V+ +S+             L +   PE++ +N   + 
Sbjct: 120 HIVVDGRKTNIPSYTVKVGQVIAVRPQSRSRTYFKNLVDSGVLNKHRAPEWLRLNPAELS 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T V +P           +   L+VEFYSR
Sbjct: 180 GTVVALPRR---EDAEAGINEQLIVEFYSR 206


>gi|224437308|ref|ZP_03658280.1| 30S ribosomal protein S4 [Helicobacter cinaedi CCUG 18818]
 gi|313143763|ref|ZP_07805956.1| 30S ribosomal protein S4 [Helicobacter cinaedi CCUG 18818]
 gi|313128794|gb|EFR46411.1| 30S ribosomal protein S4 [Helicobacter cinaedi CCUG 18818]
          Length = 208

 Score =  201 bits (512), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R YGPG HGQ+R     Y GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQKRGKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR++F+EA+R  G+T  NL+  +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKIMYG-VSEKQFRALFREANRQEGNTGENLVRIIEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I SY  K G  IEVK+KSK    V+ A  L A+  +  ++ V+ +
Sbjct: 119 LVTHGHILVNGKHVDIPSYMVKPGQKIEVKEKSKNNPQVVRAIDLTAQTGIVPWVDVDKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++  L+VE YS+
Sbjct: 179 KKFGIFTRFPQREEVV---IPIEERLIVELYSK 208


>gi|292492445|ref|YP_003527884.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4]
 gi|291581040|gb|ADE15497.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4]
          Length = 208

 Score =  201 bits (512), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 128/212 (60%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQ-RRKSKPSYFGLQLRAK 55
           M+K    K K  RR G +L+ +    P++++      PG HG   R+++ S + LQLR K
Sbjct: 1   MAKYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGARRARMSDYALQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + EK+FR  +KEA R RG T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKLRRMYGVL-EKQFRRYYKEAARRRGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDN 174
           ++H+ +LVNG+ +N+ SY+ +  DV+ V++K+K+   +  A +LA+ R   ++I +N   
Sbjct: 120 ISHKGILVNGKVINVPSYQIRAEDVVSVREKAKKQDRIKFALELAQARPELDWIEINMGK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  TF R+P   +  P    +Q NLVVE YS+
Sbjct: 180 LEGTFKRVPERSELAP---DIQENLVVELYSK 208


>gi|87122791|ref|ZP_01078664.1| 30S ribosomal protein S4 [Marinomonas sp. MED121]
 gi|86161956|gb|EAQ63248.1| 30S ribosomal protein S4 [Marinomonas sp. MED121]
          Length = 206

 Score =  201 bits (512), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS-PVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L  +  S  + ++      PG+HG  R+ + S +GLQLR KQ
Sbjct: 1   MARYIGPTCKLSRREGTDLQLKSGSRALESKCKAETVPGVHGA-RRGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +K+A R +G T  NL+  LESRLD +VYRA F  T   +RQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKDAARGKGATGENLLQLLESRLDNVVYRAGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
            H+ + VNG +VNI SY+ K GDV+ V++K+K+   +  A +L+  R    ++  +   +
Sbjct: 119 AHKGIQVNGATVNIASYQVKAGDVVSVREKAKKQLRIQNAIELSKNRTSTHWVETDATKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            A F   P           +  NL+VE YS+
Sbjct: 179 EAVFKAAPERSD---LSAEINENLIVELYSK 206


>gi|325684425|gb|EGD26593.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 203

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  RSY PG HG   + + S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYVPGQHGPNHRGRLSEYGLQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G +SE++FR++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MFG-LSERQFRTLFVRAGKIREGQHGINFMILLERRLDNVVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + D M    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +  P    +   LVVE+Y++
Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201


>gi|124025174|ref|YP_001014290.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. NATL1A]
 gi|152112245|sp|A2C0L5|RS4_PROM1 RecName: Full=30S ribosomal protein S4
 gi|123960242|gb|ABM75025.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. NATL1A]
          Length = 202

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RS+ PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSHPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE+RLD + +R  F PTI  +RQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+  +I SY+CK GDVI ++             +     +VP ++ ++   + A  
Sbjct: 117 VTVNGKITDIASYQCKAGDVIAIRDNKASKQLAQANLEFPGLANVPPHLELDKTKLSAKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 TA---KTDREWVAIEINELLVVEYYSR 200


>gi|256842855|ref|ZP_05548343.1| 30S ribosomal protein S4 [Lactobacillus crispatus 125-2-CHN]
 gi|256848781|ref|ZP_05554215.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-1A-US]
 gi|262045821|ref|ZP_06018785.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-3A-US]
 gi|293381690|ref|ZP_06627671.1| 30S ribosomal protein S4 [Lactobacillus crispatus 214-1]
 gi|295692644|ref|YP_003601254.1| 30S ribosomal protein s4 [Lactobacillus crispatus ST1]
 gi|256614275|gb|EEU19476.1| 30S ribosomal protein S4 [Lactobacillus crispatus 125-2-CHN]
 gi|256714320|gb|EEU29307.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-1A-US]
 gi|260573780|gb|EEX30336.1| 30S ribosomal protein S4 [Lactobacillus crispatus MV-3A-US]
 gi|290921737|gb|EFD98758.1| 30S ribosomal protein S4 [Lactobacillus crispatus 214-1]
 gi|295030750|emb|CBL50229.1| 30S ribosomal protein S4 [Lactobacillus crispatus ST1]
          Length = 203

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 60  MYG-LNERQFRTLFTRAGKIREGQHGVNFMILLERRLDSLVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALE-AVTARPSFVSFDENKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDEALVVEWYNK 201


>gi|199597503|ref|ZP_03210932.1| Ribosomal protein S4 [Lactobacillus rhamnosus HN001]
 gi|199591526|gb|EDY99603.1| Ribosomal protein S4 [Lactobacillus rhamnosus HN001]
          Length = 203

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G +L G  K  +  R Y PG HG   + K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGNHGANNRRKISEYGQQLREKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F  A + +  T   N +  LE+RLD +V+R     +   ARQ VNH 
Sbjct: 60  MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ ++I SY  + G VI ++++S+ LA V EA +      P Y++ + +    + 
Sbjct: 119 HITVDGKRLDIPSYEVQPGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +  P    +  +LVVE+Y
Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199


>gi|313123420|ref|YP_004033679.1| 30S ribosomal protein s4 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279983|gb|ADQ60702.1| 30S ribosomal protein S4 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 203

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  RSY PG HG   + + S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-LARRSYVPGQHGPNHRGRLSEYGMQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G +SE++FR++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MFG-LSERQFRTLFVRAGKIREGQHGINFMILLERRLDNVVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + D M    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQTISLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +  P    +   LVVE+Y++
Sbjct: 178 VRFPERDEMEP---EIDEALVVEYYNK 201


>gi|118474712|ref|YP_891268.1| 30S ribosomal protein S4 [Campylobacter fetus subsp. fetus 82-40]
 gi|152060940|sp|A0RM35|RS4_CAMFF RecName: Full=30S ribosomal protein S4
 gi|118413938|gb|ABK82358.1| ribosomal protein S4 [Campylobacter fetus subsp. fetus 82-40]
          Length = 208

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR+G +L  +       KS ++ R Y PG HGQ RK+K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQ-RKTKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFSEAARREGNTGALLIGLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I SYR   G+ IEV +KSK    ++ A +L  +  +  ++ V  D
Sbjct: 119 LVTHGHILVNGKKVDIPSYRVTAGEKIEVAEKSKTNPQIVRAIELTNQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F RIP   + V   + ++   +VE YS+
Sbjct: 179 KKYGIFTRIPEREEVV---IPVEERYIVELYSK 208


>gi|319942197|ref|ZP_08016513.1| 30S ribosomal protein S4 [Sutterella wadsworthensis 3_1_45B]
 gi|319804250|gb|EFW01142.1| 30S ribosomal protein S4 [Sutterella wadsworthensis 3_1_45B]
          Length = 208

 Score =  201 bits (511), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY----GPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +  +    ++       PG HG+   ++ S +G Q+R  
Sbjct: 1   MARYLGPKLKLSRREGIDLNLKSARRSFESKVKDVGSKPGQHGKISGARTSDYGNQMRET 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK K+ YG + E++FR  F EA R RG+T   L+  LESRLD +VYR  F  T   +RQ 
Sbjct: 61  QKAKRMYGVL-ERQFRRYFAEASRLRGNTGEKLLQLLESRLDNVVYRMGFGSTRAESRQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDN 174
           V+H  + VNGR VNI SY  + GDVI +++K+++   + EA +LA+++  P ++ V+   
Sbjct: 120 VSHGAIEVNGRKVNIPSYSVRAGDVITIREKAQKQVRIAEALELAQQNGFPAWVEVDAKK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              TF   P+  +  P    +   L++E YSR
Sbjct: 180 FTGTFKNAPARDEIAP---EINEALIIERYSR 208


>gi|158520749|ref|YP_001528619.1| RNA-binding S4 domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|226732176|sp|A8ZV81|RS4_DESOH RecName: Full=30S ribosomal protein S4
 gi|158509575|gb|ABW66542.1| RNA-binding S4 domain protein [Desulfococcus oleovorans Hxd3]
          Length = 208

 Score =  201 bits (511), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +   S  ++ RR    L+ +       K   + R Y PG HGQ R     Y G+QLR 
Sbjct: 1   MGRYRESVCRLCRRENLKLFLKGDRCFSDKCAFDRRGYPPGEHGQLRPKFSGY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG +SE +FR +F EADR +G T   L+  LESRLD  VYR  FV +    RQ
Sbjct: 60  KQKVKRMYG-LSEGQFRRVFAEADRRKGITGSTLLVLLESRLDNAVYRLGFVNSRTQGRQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            + H H LVNG++V+I SY    GDVIEV++KS+ +  + E+    E R VP+++S+  +
Sbjct: 119 LIRHNHFLVNGKNVDIPSYVLSPGDVIEVREKSRNMQVIDESLAAVERRGVPQWLSLEKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N       +P   +D+  P  +Q  L+VE YS+
Sbjct: 179 NKRGVVKNLPVR-EDITIP--IQEQLIVELYSK 208


>gi|320352938|ref|YP_004194277.1| 30S ribosomal protein S4P [Desulfobulbus propionicus DSM 2032]
 gi|320121440|gb|ADW16986.1| SSU ribosomal protein S4P [Desulfobulbus propionicus DSM 2032]
          Length = 209

 Score =  200 bits (510), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR    ++ +       K     RS+ PG HGQ R  K S + +QLR 
Sbjct: 1   MARYTGASCRLCRRENLKMFLKGDRCYSDKCAFERRSFAPGQHGQNRFRKVSDYAVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A+R++G T   L+  LE RLD ++YR+ F  +   ARQ
Sbjct: 61  KQKVKQMYGML-EAQFRRYFERAERAKGVTGETLLIMLERRLDNVLYRSGFASSRDQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H    +NG+ VNI S++   GD+I +K+K ++   V++  + A  R +P ++ ++  
Sbjct: 120 MVRHNLFTLNGKKVNIPSHQVNAGDIIALKEKYQKSEQVIDNLEGAVRRGLPSWLELDQA 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P+  +     + +Q  L+VE YS+
Sbjct: 180 KFHCAVKALPNREE---ITMPIQEQLIVELYSK 209


>gi|223038545|ref|ZP_03608839.1| ribosomal protein S4 [Campylobacter rectus RM3267]
 gi|255321747|ref|ZP_05362902.1| ribosomal protein S4 [Campylobacter showae RM3277]
 gi|222880402|gb|EEF15489.1| ribosomal protein S4 [Campylobacter rectus RM3267]
 gi|255301227|gb|EET80489.1| ribosomal protein S4 [Campylobacter showae RM3277]
          Length = 208

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR+G +L  +       KS ++ R Y PG HGQRR     Y GLQLR 
Sbjct: 1   MARYRGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHGQRRSKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FR +F+EA R  G+T   L+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-ISEKQFRRLFQEAARREGNTGALLVQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I SYR + G  +EV +KSK    ++ A  L A+  +  ++ V  D
Sbjct: 119 LVTHGHILVNGKRVDIPSYRVQAGAKVEVIEKSKNNPQIVRAIDLTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KKFGIFTRTPEREEVV---IPVEERFIVELYSK 208


>gi|220903959|ref|YP_002479271.1| ribosomal protein S4 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254764584|sp|B8IYL6|RS4_DESDA RecName: Full=30S ribosomal protein S4
 gi|219868258|gb|ACL48593.1| ribosomal protein S4 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 208

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +K ++ RR G  L+ +       K   + R Y PG HG+ RK    Y  +QLR 
Sbjct: 1   MAKYTEAKCRMCRREGCKLFLKGDRCFTDKCAYDRRPYAPGQHGRARKKVSEY-AVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I E++F   F +AD  +G T  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKTRRIYG-ILERQFHGYFVKADMQKGVTGTNLLVILERRLDNVVYRLGFANSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    +NGR VNI S + + GD IEV +K++++  + EA + +A R  P ++  +  
Sbjct: 119 LVRHGVFTLNGRKVNIPSLQVRLGDTIEVPEKNRKIPVLAEAQEVIARRGCPAWLEADGA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P    D+ +PV     L+VE YS+
Sbjct: 179 AFKGTVKAMPQR-DDIQFPV--NEQLIVELYSK 208


>gi|52840598|ref|YP_094397.1| 30S ribosomal protein S4 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54293345|ref|YP_125760.1| 30S ribosomal protein S4 [Legionella pneumophila str. Lens]
 gi|148361031|ref|YP_001252238.1| 30S ribosomal protein S4 [Legionella pneumophila str. Corby]
 gi|296105901|ref|YP_003617601.1| small subunit ribosomal protein S4 [Legionella pneumophila 2300/99
           Alcoy]
 gi|61215402|sp|Q5WZI8|RS4_LEGPL RecName: Full=30S ribosomal protein S4
 gi|61215429|sp|Q5ZYL9|RS4_LEGPH RecName: Full=30S ribosomal protein S4
 gi|172047874|sp|A5IHP2|RS4_LEGPC RecName: Full=30S ribosomal protein S4
 gi|52627709|gb|AAU26450.1| 30S ribosomal protein S4 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53753177|emb|CAH14624.1| 30S ribosomal subunit protein S4 [Legionella pneumophila str. Lens]
 gi|148282804|gb|ABQ56892.1| 30S ribosomal protein S4 [Legionella pneumophila str. Corby]
 gi|295647802|gb|ADG23649.1| small subunit ribosomal protein S4 [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609161|emb|CBW98617.1| 30S ribosomal subunit protein S4 [Legionella pneumophila 130b]
          Length = 206

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +               PG HG ++    SY G+QLR KQ
Sbjct: 1   MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSY-GIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I EK+FR+ +K+A R +G T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRLYG-ILEKQFRNYYKKAARQKGSTGENLMALLERRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
            H+ +LVN + VN+ S+    GD + V+QK+K    +  A  L+E+  P ++I+V+  + 
Sbjct: 119 AHKAILVNDKVVNVPSFLVNPGDTVSVRQKAKNQGRIQAALALSEQRAPCDWITVDTGSF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P+    +        NLVVE YS+
Sbjct: 179 KGTFSTAPT---LMDLSSDYNVNLVVELYSK 206


>gi|54296389|ref|YP_122758.1| 30S ribosomal protein S4 [Legionella pneumophila str. Paris]
 gi|61215409|sp|Q5X835|RS4_LEGPA RecName: Full=30S ribosomal protein S4
 gi|53750174|emb|CAH11566.1| 30S ribosomal subunit protein S4 [Legionella pneumophila str.
           Paris]
          Length = 206

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L  +               PG HG ++    SY G+QLR KQ
Sbjct: 1   MARYLGPKCKLSRREGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSY-GIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I EK+FR+ +K+A R +G T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KIRRLYG-ILEKQFRNYYKKAARQKGSTGENLMALLERRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
            H+ +LVN + VN+ S+    GD I V+QK+K    +  A  L+E+  P ++I+V+  + 
Sbjct: 119 AHKAILVNDKVVNVPSFLVNPGDTISVRQKAKNQGRIQAALALSEQRAPCDWITVDTGSF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P+    +        NLVVE YS+
Sbjct: 179 KGTFSTAPT---LMDLSSDYNVNLVVELYSK 206


>gi|308272954|emb|CBX29558.1| 30S ribosomal protein S4 [uncultured Desulfobacterium sp.]
          Length = 209

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR    ++ +       K   + RSY PG HGQRR  K S +G+QLR 
Sbjct: 1   MARYIGAVCRLCRRENLKMFLKGDRCYSDKCAFDRRSYSPGQHGQRRGRKFSDYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG +SEK+FR  F+ A+R +  T  NL+  LE RLD +VYR  FV +    R 
Sbjct: 61  KQKTKRLYG-LSEKQFRLFFERAERQKNITGTNLLVMLERRLDNVVYRLGFVASRTQGRH 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
           FV H H  +NG+ +NI SY  K GD++E+ + S+ + ++ ++    A R VP+++ +  D
Sbjct: 120 FVRHNHFKINGKKINIPSYLIKVGDILELNETSRNIKAISDSLDAVARRGVPQWLELEKD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N        P   +D+  P  +Q  L+VE YS+
Sbjct: 180 NFKGRIKSFPVR-EDITMP--IQEQLIVELYSK 209


>gi|15807121|ref|NP_295850.1| 30S ribosomal protein S4 [Deinococcus radiodurans R1]
 gi|26399534|sp|Q9RSJ7|RS4_DEIRA RecName: Full=30S ribosomal protein S4
 gi|6459925|gb|AAF11677.1|AE002047_10 ribosomal protein S4 [Deinococcus radiodurans R1]
          Length = 205

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 119/209 (56%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +   S  K  RR G NL    K    ++ R YGPG HGQRRK +PS + ++LR KQK+
Sbjct: 1   MGRFRGSITKQSRREGINLAETEKVQKYLDRRPYGPGQHGQRRKGRPSDYSVRLREKQKL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
            + YG ++EK+FR++F+EA    G T    +  LE RLD +V+R  F  T   ARQFV H
Sbjct: 61  ARLYG-MNEKQFRNLFEEASNVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVGH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVA 177
            H+LVNG+ V+I SYR K GD I V + S+ +  + E       R V  +I ++ DN   
Sbjct: 120 GHILVNGKKVDIASYRVKIGDEISVAEGSRSMGFIQENMDAQKRRRVSPWIEMDQDNFKG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           TF R+P+        + +  N ++E+YSR
Sbjct: 180 TFSRLPAR---EDLALPINENFIIEYYSR 205


>gi|94987423|ref|YP_595356.1| 30S ribosomal protein S4 [Lawsonia intracellularis PHE/MN1-00]
 gi|152060957|sp|Q1MPP2|RS4_LAWIP RecName: Full=30S ribosomal protein S4
 gi|94731672|emb|CAJ55035.1| ribosomal protein S4 [Lawsonia intracellularis PHE/MN1-00]
          Length = 208

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   +K ++ RR G  L+ +       K   + R Y PG HG+ RK K S + +QLR 
Sbjct: 1   MAKYNDAKCRLCRREGTKLFLKGDRCFTDKCAYDRRPYAPGQHGRVRK-KMSDYAIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+FR  F  AD ++G T  NL+S+LE RLD +VYR     +   ARQ
Sbjct: 60  KQKVRRVYGVL-EKQFREYFVHADMAKGITGVNLLSYLERRLDNVVYRLGLANSRVQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            + H    +NG  V I S +   GD IEV +K+++++ V +A  +   R  P ++ ++  
Sbjct: 119 LIRHGIFTLNGHKVTIPSLQVNVGDSIEVPEKNRKISVVADAQSIVGRRGCPSWLELDAS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P   +D+ +P  +  +L+VE YS+
Sbjct: 179 TFKGVVKALPQR-EDIQFP--INEHLIVELYSK 208


>gi|194477170|ref|YP_002049349.1| 30S ribosomal protein S4 [Paulinella chromatophora]
 gi|171192177|gb|ACB43139.1| 30S ribosomal protein S4 [Paulinella chromatophora]
          Length = 203

 Score =  200 bits (510), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I RR+G+      KS    R+Y PG HGQ  + K S + ++L  KQK++ 
Sbjct: 1   MARYRGPRLRITRRLGDLPGLTRKSA--KRAYPPGQHGQVARRKRSEYAIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LESRLD I +R  F PT+  ARQ VNH H
Sbjct: 59  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLESRLDNICFRLGFGPTVPGARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNGR ++I SY+CK GD+I +++  +         +     +VP ++  +   +    
Sbjct: 118 VLVNGRVLDIPSYQCKTGDIISIRESKQSRRLAETNLEFPGLANVPPHLEFDKTKLRG-- 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI S ++     + +   LVVE+YSR
Sbjct: 176 -RISSRIEREWVALEINELLVVEYYSR 201


>gi|225016258|ref|ZP_03705450.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum
           DSM 5476]
 gi|224950933|gb|EEG32142.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum
           DSM 5476]
          Length = 208

 Score =  200 bits (510), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G+ L+ +       K  V+ RSY PG HGQ RK    Y GLQLR 
Sbjct: 1   MARYTGAVCRLCRREGKKLFLKGERCFSDKCSVSLRSYAPGQHGQSRKKVSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ  K+YY ++SE +F   F+ A+R  G T  NL+  LESRLD IVYRA F  +   ARQ
Sbjct: 60  KQMAKRYY-NVSENQFYKYFEMAERKPGMTGENLLKILESRLDNIVYRAGFASSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NG+ VNI S   K GDVIEV + S+    +    +  + R VP ++ VN D
Sbjct: 119 LVLHNHFRLNGKKVNICSLLVKPGDVIEVTEASRSNDKMKAVVETWSARPVPMWMDVNKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M     R P+  +     + +  +L+VE YS+
Sbjct: 179 GMTVKMDRYPNRDE---IDLEVAEHLIVELYSK 208


>gi|313683416|ref|YP_004061154.1| SSU ribosomal protein s4p [Sulfuricurvum kujiense DSM 16994]
 gi|313156276|gb|ADR34954.1| SSU ribosomal protein S4P [Sulfuricurvum kujiense DSM 16994]
          Length = 208

 Score =  200 bits (510), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS ++ R YGPG HGQ R++K S +G QLR 
Sbjct: 1   MARYRGPVEKIERRFGVSLGLKGERRLAGKSALDKRPYGPGQHGQ-RRTKISEYGTQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+ RS+F EA R  G+T  NL+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-LSEKQMRSLFGEAKRRTGNTGTNLVMLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            VNH HVLV+G+ V+I SYR K G  +E+ +KSK+   ++ A +L  +  +  ++ ++ D
Sbjct: 119 LVNHGHVLVDGKRVDIPSYRVKPGQKVEIHEKSKKNNQIVRAIELTNQTGLAAWVDIDQD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KAFGIFTRLPEREEVV---IPVEERLIVELYSK 208


>gi|150020872|ref|YP_001306226.1| 30S ribosomal protein S4 [Thermosipho melanesiensis BI429]
 gi|172048669|sp|A6LLP0|RS4_THEM4 RecName: Full=30S ribosomal protein S4
 gi|149793393|gb|ABR30841.1| RNA-binding S4 domain protein [Thermosipho melanesiensis BI429]
          Length = 209

 Score =  200 bits (510), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    + K+ RR G  L+ +       K   + R + PG HG+ +K    Y G+QLRA
Sbjct: 1   MARYTGPQCKLCRREGMKLYLKGERCFTDKCAFDRRPFAPGDHGREKKKLTQY-GIQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ MK+ YG + E +FR  +++A +  GDT  NL+  +E RLD +VYR  F      ARQ
Sbjct: 60  KQTMKRIYGVL-EAQFRRYYEKAAKKSGDTRENLVVQVERRLDNVVYRLGFAVNRTTARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V+H H LVNG+ VNI SY+ + GDVIEV++KSK +  +  A +L  +++   ++SV+ +
Sbjct: 119 LVSHGHFLVNGKKVNIPSYQVRPGDVIEVREKSKDILPIKNAIELNKDKNRMPWLSVDFE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N    + R P   + +  PV +    ++E YSR
Sbjct: 179 NYKGVYERHPKLEEVIDLPVDV--QAIIELYSR 209


>gi|305679764|ref|ZP_07402574.1| ribosomal protein S4 [Corynebacterium matruchotii ATCC 14266]
 gi|305660384|gb|EFM49881.1| ribosomal protein S4 [Corynebacterium matruchotii ATCC 14266]
          Length = 203

 Score =  200 bits (510), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 9/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  K   + R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPVTRKSRRLRVDLVGGSK-AYDKRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LE+RLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-EKQFRRYYAEANRMPGKTGENLVILLEARLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---AERDVPEYISVNHDNMVA 177
            LVNG+ VN+ SYR  + D+I+V+ KS  +    EA++    A++ +P ++ V    +  
Sbjct: 118 FLVNGKKVNVPSYRVSQYDIIDVRDKSHTMLWFEEATENLVDADKVIPAWLQVVPSTLRI 177

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P   +     V +Q  L+VE YS+
Sbjct: 178 LVHQLPERAQ---IDVPLQEQLIVELYSK 203


>gi|225020483|ref|ZP_03709675.1| hypothetical protein CORMATOL_00490 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946872|gb|EEG28081.1| hypothetical protein CORMATOL_00490 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 203

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 9/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  K   + R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPVTRKSRRLRVDLVGGSK-AYDKRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LE+RLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-EKQFRRYYAEANRMPGKTGENLVILLEARLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---AERDVPEYISVNHDNMVA 177
            LVNG+ VN+ SYR  + D+I+V+ KS+ +    EA++    A++ +P ++ V    +  
Sbjct: 118 FLVNGKKVNVPSYRVSQYDIIDVRDKSRTMLWFEEATENLVDADKVIPAWLQVVPSTLRI 177

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P   +     V +Q  L+VE YS+
Sbjct: 178 LVHQLPERAQ---IDVPLQEQLIVELYSK 203


>gi|217077309|ref|YP_002335027.1| 30S ribosomal protein S4 [Thermosipho africanus TCF52B]
 gi|226695088|sp|B7IHX2|RS4_THEAB RecName: Full=30S ribosomal protein S4
 gi|217037164|gb|ACJ75686.1| ribosomal protein S4 [Thermosipho africanus TCF52B]
          Length = 209

 Score =  200 bits (509), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    + K+ RR G  L+ +       K   + R + PG HG+ +K    Y G+QLRA
Sbjct: 1   MARYTGPQCKLCRREGMKLYLKGERCFTDKCAFDRRPFAPGDHGRDKKKLTQY-GIQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ MK+ YG + E +FR  ++ A R  GDT  NL+  +E RLD +VYR  F      ARQ
Sbjct: 60  KQTMKRIYGVL-ETQFRRYYETASRKSGDTRENLVVQVERRLDNVVYRLGFAVNRTTARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            VNH HVLVNGR V I SY+ + GDVIE+++KS+ +  V  A +L  +++   +++V+++
Sbjct: 119 LVNHGHVLVNGRKVTIPSYQVRPGDVIEIREKSRDILPVKNAIELNKDKNTMPWLTVDYE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N   T+ R P   + +  PV +    ++E YSR
Sbjct: 179 NYKGTYERNPKLEEVIDLPVDV--QAIIELYSR 209


>gi|284040595|ref|YP_003390525.1| ribosomal protein S4 [Spirosoma linguale DSM 74]
 gi|283819888|gb|ADB41726.1| ribosomal protein S4 [Spirosoma linguale DSM 74]
          Length = 201

 Score =  200 bits (509), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 112/206 (54%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE + G  K  +  ++YGPG+HG+ RK K S + LQL  KQK+K 
Sbjct: 1   MARYTGPKAKISRKFGEPIMGPSK-ALQKKNYGPGMHGRGRKRKQSEYALQLLEKQKVKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I E++FR++F  A    G T  NL+   E+RLD  VYR     +  AARQ V+H+H
Sbjct: 60  TYG-ILERQFRALFHRAQVREGITGENLLKLCEARLDNTVYRLGIASSRRAARQLVSHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  VNI SY  K G +I V++KSK L +V  +          ++  +   +V  F+
Sbjct: 119 IIVDGEVVNIPSYSLKPGQLIGVREKSKSLEAVSSSLSARNTKRYNWVEWDGQQLVGKFI 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P   +    P       +VE YS+
Sbjct: 179 SYPERDQ---IPENFNEQAIVELYSK 201


>gi|238855293|ref|ZP_04645612.1| ribosomal protein S4 [Lactobacillus jensenii 269-3]
 gi|256850911|ref|ZP_05556300.1| ribosomal protein S4 [Lactobacillus jensenii 27-2-CHN]
 gi|260661125|ref|ZP_05862039.1| ribosomal protein S4 [Lactobacillus jensenii 115-3-CHN]
 gi|260664651|ref|ZP_05865503.1| ribosomal protein S4 [Lactobacillus jensenii SJ-7A-US]
 gi|282932414|ref|ZP_06337839.1| ribosomal protein S4 [Lactobacillus jensenii 208-1]
 gi|282934177|ref|ZP_06339455.1| ribosomal protein S4 [Lactobacillus jensenii 208-1]
 gi|313471896|ref|ZP_07812388.1| ribosomal protein S4 [Lactobacillus jensenii 1153]
 gi|238832185|gb|EEQ24503.1| ribosomal protein S4 [Lactobacillus jensenii 269-3]
 gi|239529185|gb|EEQ68186.1| ribosomal protein S4 [Lactobacillus jensenii 1153]
 gi|256615973|gb|EEU21161.1| ribosomal protein S4 [Lactobacillus jensenii 27-2-CHN]
 gi|260548062|gb|EEX24038.1| ribosomal protein S4 [Lactobacillus jensenii 115-3-CHN]
 gi|260561716|gb|EEX27688.1| ribosomal protein S4 [Lactobacillus jensenii SJ-7A-US]
 gi|281301791|gb|EFA94057.1| ribosomal protein S4 [Lactobacillus jensenii 208-1]
 gi|281303363|gb|EFA95540.1| ribosomal protein S4 [Lactobacillus jensenii 208-1]
          Length = 203

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-LARRNYAPGEHGPNNRGRLSEYGMQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++FR++F  A + R  +   N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  MFG-LNERQFRNLFNRAGKIRQGEHGTNFMVLLERRLDNIVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYEVKVGQEISLKEKSKNLQQVKDALE-AVVSRPSFVSFDENKLTGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EINEALVVEYYNK 201


>gi|87125591|ref|ZP_01081436.1| 30S ribosomal protein S4 [Synechococcus sp. RS9917]
 gi|86166891|gb|EAQ68153.1| 30S ribosomal protein S4 [Synechococcus sp. RS9917]
          Length = 202

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++++           +     +VP ++ ++   + A  
Sbjct: 117 VAVNGRVTDIASYQCKAGDVITIRERKGSKKLAEGNLEFPGLANVPPHLELDKTKLSAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      +     + +   LVVE+YSR
Sbjct: 177 I---GRCEREWVALEINELLVVEYYSR 200


>gi|77165764|ref|YP_344289.1| ribosomal protein S4 [Nitrosococcus oceani ATCC 19707]
 gi|254433943|ref|ZP_05047451.1| ribosomal protein S4 [Nitrosococcus oceani AFC27]
 gi|90101699|sp|Q3J8T7|RS4_NITOC RecName: Full=30S ribosomal protein S4
 gi|76884078|gb|ABA58759.1| SSU ribosomal protein S4P [Nitrosococcus oceani ATCC 19707]
 gi|207090276|gb|EDZ67547.1| ribosomal protein S4 [Nitrosococcus oceani AFC27]
          Length = 208

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQ-RRKSKPSYFGLQLRAK 55
           M+K    K K  RR G +L+ +    P++++      PG HG   R+++ S + LQLR K
Sbjct: 1   MAKYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGARRARMSDYALQLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+++ YG + E++FR  +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ 
Sbjct: 61  QKLRRMYGVL-ERQFRRYYKEAARRKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQL 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDN 174
           +NH+ VLVNG+ +NI SY+ +  DV+ V++K+K+   +  A +LA+ R   E+I +N   
Sbjct: 120 INHKGVLVNGQGINIPSYQVRAEDVVAVREKAKRQDRIKFALELAQARAEAEWIEINAGK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F R+P   +  P    +Q NLVVE YS+
Sbjct: 180 LEGVFKRVPERSELAP---DIQENLVVELYSK 208


>gi|260893345|ref|YP_003239442.1| ribosomal protein S4 [Ammonifex degensii KC4]
 gi|260865486|gb|ACX52592.1| ribosomal protein S4 [Ammonifex degensii KC4]
          Length = 208

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    + ++ RR G  L+ +       K  +  R+Y PG HG+ R+    Y  +QLR 
Sbjct: 1   MARYTGPRCRLCRREGIKLYLKGDRCYTSKCALERRNYPPGQHGRVRRKMTEY-AMQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E +FR+ F +A+R +G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKAKRIYGVL-EAQFRNYFAQAERQKGLTGENLLRLLERRLDNVVYRLGMAASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+LVNGR V+I SY  + GD I    +SK+   + E  +  A+ + P ++  + +
Sbjct: 119 LVRHGHILVNGRRVDIPSYLVEVGDKISFDPRSKESPRIQELLERAAQNNPPPWLRYDPN 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   +  P+  +     V ++ +L+VE YSR
Sbjct: 179 EAIGEVLAFPTRDQ---IDVPVKEHLIVELYSR 208


>gi|229823967|ref|ZP_04450036.1| hypothetical protein GCWU000282_01271 [Catonella morbi ATCC 51271]
 gi|229786321|gb|EEP22435.1| hypothetical protein GCWU000282_01271 [Catonella morbi ATCC 51271]
          Length = 202

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L    K  +  R+Y PG HG +RK    Y GLQL+ KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGISLSETGKE-LARRNYAPGQHGNQRKKISEY-GLQLQEKQKLRH 58

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F++A + +      N ++ LE+RLD +VYR  F  T   ARQ VNH 
Sbjct: 59  TYG-MNERQFATLFRKAGKIKTGKHGENFMALLETRLDNLVYRLGFATTRRQARQLVNHG 117

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV V+G+ V+I SY    G VI +++ S+ LA + EA +     + +++S +      T 
Sbjct: 118 HVTVDGKRVDIPSYLVTPGQVIGLRESSRDLAIIKEALENTVSRL-DFVSYDAAAFEGTL 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   LVVE+Y++
Sbjct: 177 TRLPERSE---LNAEIDEALVVEYYNK 200


>gi|28212155|ref|NP_783099.1| 30S ribosomal protein S4 [Clostridium tetani E88]
 gi|41017837|sp|Q890Q9|RS4_CLOTE RecName: Full=30S ribosomal protein S4
 gi|28204599|gb|AAO37036.1| SSU ribosomal protein S4P [Clostridium tetani E88]
          Length = 206

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K   + R Y PG HGQ RK K S +GLQLR 
Sbjct: 1   MARYTEANCRLCRREGLKLYLKGDRCYTDKCAFSRRGYAPGQHGQSRK-KISNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + EK+FR+ +K AD++RG T  NL+  LE RLD +VYR  +  +   +RQ
Sbjct: 60  KQKAKRIYGVL-EKQFRTYYKRADKARGITGENLLVLLEMRLDNVVYRLGYGDSRKESRQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ VNI S+     DVI V +KS+         +   R +P ++  N +N
Sbjct: 119 LVTHGHFLVNGKKVNIPSFNVSVNDVITVSEKSRATEKFKTFIENP-RTLPNWLEGNLEN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                V  PS  +D+  PV     L+VE YS+
Sbjct: 178 FEGKVVSQPSR-EDIDVPV--NETLIVELYSK 206


>gi|315640101|ref|ZP_07895224.1| 30S ribosomal protein S4 [Enterococcus italicus DSM 15952]
 gi|315484148|gb|EFU74621.1| 30S ribosomal protein S4 [Enterococcus italicus DSM 15952]
          Length = 203

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   +   S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLSGTGKE-LARRPYAPGQHGPNSRGSRSEYGQQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFRTLFVKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY    G VI V++KS+ L  V EA + +    P ++S + + +  + 
Sbjct: 119 HITVDGKRVDIPSYHVDLGQVIGVREKSQNLTIVKEAVE-STVGRPAFVSFDDEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +  P    +   L+VEFY
Sbjct: 178 SRLPERDELYP---DIDEALIVEFY 199


>gi|294055197|ref|YP_003548855.1| ribosomal protein S4 [Coraliomargarita akajimensis DSM 45221]
 gi|293614530|gb|ADE54685.1| ribosomal protein S4 [Coraliomargarita akajimensis DSM 45221]
          Length = 202

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 120/207 (57%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +I+RR G+ ++   K     + + PG HG R + K S + + L  KQK++ 
Sbjct: 1   MARYTGPTTRINRRFGQAIFAPTK-AFERKPHPPGQHGPRLRRKLSDYAIGLNEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+FR  F++A   RG T    +  LE RLD++VYR  F  +  AARQFV+H H
Sbjct: 60  MYG-MTEKQFRLTFEKAKNQRGVTGEIFLQMLECRLDSVVYRLGFAKSRSAARQFVSHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+  +I S+  KEGD IEV++++          + +  R VPE++++N D++ AT 
Sbjct: 119 VCVNGKKTDIASFMVKEGDEIEVRERTSSRQLATRGMEESTARTVPEWVTLNSDSLKATV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+PS+ +       +   L+VE+YSR
Sbjct: 179 NRLPSNEETE---AGINVQLIVEYYSR 202


>gi|328463108|gb|EGF34871.1| 30S ribosomal protein S4 [Lactobacillus rhamnosus MTCC 5462]
          Length = 203

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G +L G  K  +  R Y PG HG   + K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPRWKQSRRLGLSLSGTGKE-LARRPYAPGDHGANNRRKISEYGQQLREKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F+++F  A + +  T   N +  LE+RLD +V+R     +   ARQ VNH 
Sbjct: 60  MYG-LNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ ++I SY  + G VI ++++S+ LA V EA +      P Y++ + +    + 
Sbjct: 119 HITVDGKRLDIPSYEVQLGQVIGLRERSQNLAVVNEAIE-NTVSRPAYVTFDDNKKEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +  P    +  +LVVE+Y
Sbjct: 178 VRLPERGELEP---EVDESLVVEYY 199


>gi|307720212|ref|YP_003891352.1| 30S ribosomal protein S4P [Sulfurimonas autotrophica DSM 16294]
 gi|306978305|gb|ADN08340.1| SSU ribosomal protein S4P [Sulfurimonas autotrophica DSM 16294]
          Length = 208

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS +  R YGPG HGQRRK    Y GLQL  
Sbjct: 1   MARYRGPVEKIERRFGVSLNLKGERRLAGKSALEKRPYGPGQHGQRRKKVSEY-GLQLNE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FR++F EA R  G+T  NLI+ +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-ISEKQFRALFVEAKRRDGNTGTNLITLIEQRLDNVVYRMGFASTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G+ ++I SYR K G  IEVK+ SK    V+ A +L  +  +  ++ ++ +
Sbjct: 119 LVTHGHILVDGKKLDIPSYRVKPGQKIEVKEASKANNQVVRAIELTNQTGLAPWVDIDAE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KVYGIFTRLPEREEVV---IPVEERLIVELYSK 208


>gi|312144221|ref|YP_003995667.1| ribosomal protein S4 [Halanaerobium sp. 'sapolanicus']
 gi|311904872|gb|ADQ15313.1| ribosomal protein S4 [Halanaerobium sp. 'sapolanicus']
          Length = 208

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  K+ RR GE L+ +       K   + R Y PG HGQ R  K S +GLQLR 
Sbjct: 1   MARYTGSVCKLCRREGEKLYLKGARCYSKKCSFDRRPYVPGEHGQGR-HKVSEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I EK+F + FK A+ + G T  N +  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVRRIYG-IMEKQFSNYFKSAENTAGVTGENFLQLLERRLDNVVYRMGFASSRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
           FV H H+ VNGR V+I SY+    DV+ VK  S++     E  +  ++    E+I+ + +
Sbjct: 119 FVLHGHIKVNGRKVDIPSYQVDVDDVVSVKDSSRKSKRFKEVFEYNSDFATQEWINSDLE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T V +P   +D+ YPV  + +L+VE+YSR
Sbjct: 179 KAEGTVVALPER-EDIDYPV--EEHLIVEYYSR 208


>gi|291334081|gb|ADD93754.1| ribosomal protein S4 [uncultured marine bacterium
           MedDCM-OCT-S05-C114]
          Length = 202

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I+RR G  ++   K     R+Y PG HG   + K S +G  L  KQK++ 
Sbjct: 1   MSRYTGPTTRINRRFGMAIFPANK-AFERRTYPPGQHGPTYRRKVSDYGEGLLEKQKLRM 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ++EK+FR++F++A R +G T  N ++FLE+RLD +VYR  F  T  AARQ+VNH H
Sbjct: 60  LYC-LTEKQFRNLFEKAKRKQGVTGENFLTFLETRLDNVVYRLGFAKTRKAARQYVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNG+ V+I S+    GD I V++K+          +  +    P ++ VN D++  T 
Sbjct: 119 ILVNGKKVDIPSFAVSVGDEIGVREKTSSRQLATRNLEGTQYHPSPPWVDVNADSLQGTV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P + +       +   LVVEFYSR
Sbjct: 179 SRFPQNDE---LEQSINVQLVVEFYSR 202


>gi|182412027|ref|YP_001817093.1| ribosomal protein S4 [Opitutus terrae PB90-1]
 gi|226699097|sp|B1ZNC4|RS4_OPITP RecName: Full=30S ribosomal protein S4
 gi|177839241|gb|ACB73493.1| ribosomal protein S4 [Opitutus terrae PB90-1]
          Length = 203

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      ++ RR G+ + G  K     RSY PG HG + + K S + + L  KQK++ 
Sbjct: 1   MARYTGPTTRVSRRFGQQILGSGK-AFERRSYPPGQHGPKLRRKVSEYAVGLNEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR +F+ A + RG T    +  LE+RLD++VY      +  AARQFVNH H
Sbjct: 60  IYG-LLERQFRRVFEIAKKERGVTGERFLQLLETRLDSVVYLLGLAKSRAAARQFVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNG  V+I SY  K GD IEVK             +    R+VP ++S+N +   AT 
Sbjct: 119 IRVNGHKVDIASYNVKAGDEIEVKNSPASRQLATRCLEENRIRNVPGWLSMNAETFKATV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P+  +       +   L+VEFYSR
Sbjct: 179 NRLPTRDEMEQ---GINEQLIVEFYSR 202


>gi|325981829|ref|YP_004294231.1| 30S ribosomal protein S4 [Nitrosomonas sp. AL212]
 gi|325531348|gb|ADZ26069.1| ribosomal protein S4 [Nitrosomonas sp. AL212]
          Length = 208

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K    K K  RR GE L+ +       K  +  R+Y PG HGQ +K + S +G QLR 
Sbjct: 1   MAKNLEPKCKQCRREGEKLFLKGGKCFTDKCAIERRNYPPGQHGQ-KKGRTSDYGGQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG I EK+FR+I+K AD+ RG T  NL+  LE RLD + +   F  +   ARQ
Sbjct: 60  KQKIRRIYG-ILEKQFRNIYKVADKQRGITGDNLLQLLEGRLDNVAFHMGFGASRSEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H  +L+NG  VNI SYR K GD +EV +K+K+   +  A ++A  R+   +I V+  
Sbjct: 119 IVRHNGILINGSRVNIPSYRVKAGDTVEVAEKAKEQLRIKNALEMANNRNFATWIEVDTK 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M   F   P        P  +  +L+VE YS+
Sbjct: 179 AMKGIFKTKPERSD---LPATINESLIVELYSK 208


>gi|116493045|ref|YP_804780.1| 30S ribosomal protein S4 [Pediococcus pentosaceus ATCC 25745]
 gi|122265491|sp|Q03EN4|RS4_PEDPA RecName: Full=30S ribosomal protein S4
 gi|116103195|gb|ABJ68338.1| SSU ribosomal protein S4P [Pediococcus pentosaceus ATCC 25745]
          Length = 202

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HGQ  + K S +G+QLR KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLTGTGKE-LARRPYAPGDHGQNNRRKISEYGMQLREKQKLRM 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-LTERQFSNLFVRAGKIREGLPGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  + G VI V++KSK L  + EA + A    P+++  + D +  + 
Sbjct: 119 HITVDGKRVDIPSYEVEIGQVIGVREKSKDLKIISEAVE-AVVGRPQFVQFDADKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +       +  +L+VE+Y++
Sbjct: 178 VRLPQRDE---LEADIDDSLIVEYYNK 201


>gi|95930497|ref|ZP_01313233.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
 gi|95133537|gb|EAT15200.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
          Length = 206

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K  ++K KI RR+G N++G PK    +  R   PG HG  R+ KPS +  QL  KQK+
Sbjct: 1   MAKNFTAKGKIVRRLGVNIYGNPKYDRLLERRPTPPGEHGAGRRGKPSDYSRQLTEKQKV 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG +SEK+FR +F +A   +G T HN++  LE RLD +V+R     T   AR FV H
Sbjct: 61  RFCYG-LSEKQFRRVFDKAKAMKGVTGHNMLVLLERRLDNMVFRLGLASTRSEARLFVRH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVA 177
            H LVNGR V+I SY  + GDVIEV++KS+++  + EA      R +P ++ +  D    
Sbjct: 120 GHFLVNGRKVDIPSYLVRAGDVIEVREKSRKIGKISEALDSVMRRGIPSWLELERDAFKG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T   +P+  +++  PV  +  L+VE YS+
Sbjct: 180 TVKSLPAR-EELTTPV-FEEQLIVELYSK 206


>gi|302390984|ref|YP_003826804.1| 30S ribosomal protein S4P [Acetohalobium arabaticum DSM 5501]
 gi|302203061|gb|ADL11739.1| SSU ribosomal protein S4P [Acetohalobium arabaticum DSM 5501]
          Length = 208

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR GE L+ +       K  +  R Y PG  G +R  K S FG+QLR 
Sbjct: 1   MARDTKAVCRKCRREGEKLFLKGERCFSDKCAIERRPYAPGEQGNKR-QKLSEFGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG +SE +F+  F+ AD   G T  N +  LESRLD IVYR  F  +   ARQ
Sbjct: 60  KQKVRQIYG-VSESQFKKYFEMADNKPGITGENFLKILESRLDNIVYRLGFAASRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H LVNG  V+I SY  +EGD +EVK  SK +  + E  +   ++++P ++  N +
Sbjct: 119 LVRHGHFLVNGERVDIPSYLVEEGDEVEVKDSSKDMKRMQEIVEFTGQQNIPAWVEANLE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N     ++ P   +D+  PV     L+VEFYSR
Sbjct: 179 NKTGKVLKEPER-EDIDLPVR--EQLIVEFYSR 208


>gi|328957152|ref|YP_004374538.1| 30S ribosomal protein S4 [Carnobacterium sp. 17-4]
 gi|328673476|gb|AEB29522.1| 30S ribosomal protein S4 [Carnobacterium sp. 17-4]
          Length = 201

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   + K + +GLQL+ KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLSGTGKE-IERRPYAPGPHGPNSRKKLTEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++F ++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MFG-MNERQFSNLFLKAGKIKEGKHGENFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY    G VI V++KSK +  +  A++ A    P+Y++ + + +  ++
Sbjct: 119 HILVDGKRVDIPSYSVSVGQVITVREKSKNMDIIKSAAE-ALFGRPDYVTFDVEKLEGSY 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   ++VE+YSR
Sbjct: 178 NRLPLRDE---LSAEIDETIIVEYYSR 201


>gi|72383580|ref|YP_292935.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. NATL2A]
 gi|90101705|sp|Q46LZ9|RS4_PROMT RecName: Full=30S ribosomal protein S4
 gi|72003430|gb|AAZ59232.1| SSU ribosomal protein S4P [Prochlorococcus marinus str. NATL2A]
          Length = 202

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RS+ PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSHPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE+RLD + +R  F PTI  +RQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++             +     +VP ++ ++   + A  
Sbjct: 117 VTVNGRITDIASYQCKAGDVIAIRDNKASKQLAQANLEFPGLANVPPHLELDKTKLSAKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 SA---KTDREWVAIEINELLVVEYYSR 200


>gi|330470145|ref|YP_004407888.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032]
 gi|328813116|gb|AEB47288.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032]
          Length = 208

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +      PK P  +R + PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR  ++EA   +  T   L+  LESRLD +VYRA +  +   ARQ
Sbjct: 60  KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H  VNG+ V+I SYR    D+IEV+ KSK+L   + A ++   + VP ++     
Sbjct: 119 LVKHGHFTVNGKKVDIPSYRVSAHDIIEVRAKSKELTPFIVAQAEAGSKTVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +P+          +Q  L+VE YS+
Sbjct: 179 QMKVLVHSLPARQ---VIDTQVQEQLIVELYSK 208


>gi|148238927|ref|YP_001224314.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7803]
 gi|172047783|sp|A5GJA2|RS4_SYNPW RecName: Full=30S ribosomal protein S4
 gi|147847466|emb|CAK23017.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7803]
          Length = 202

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++++           +     +VP ++ ++   + A  
Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKQLAEGNLEFPGLANVPPHLELDKPKLNAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V      +     + +   LVVE+YSR
Sbjct: 177 V---GRCEREWVALEINELLVVEYYSR 200


>gi|254458831|ref|ZP_05072255.1| ribosomal protein S4 [Campylobacterales bacterium GD 1]
 gi|207084597|gb|EDZ61885.1| ribosomal protein S4 [Campylobacterales bacterium GD 1]
          Length = 208

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS +  R YGPG HGQRRK    Y GLQL  
Sbjct: 1   MARYRGPVEKIERRFGVSLNLKGERRLAGKSALEKRPYGPGQHGQRRKKVSEY-GLQLNE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR++F EA R  G+T  NLI+ +ESRLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRALFVEAKRREGNTGTNLITLIESRLDNVVYRMGFASTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G+ ++I SYR K G  IEV++ SK+   ++ A +L  +  +  ++ ++ D
Sbjct: 119 LVTHGHLLVDGKKLDIPSYRVKPGQKIEVRESSKKNNQIVRAMELTNQTGLAPWVDIDAD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KVFGIFTRLPEREEVV---IPVEERLIVELYSK 208


>gi|237786335|ref|YP_002907040.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385]
 gi|259495271|sp|C4LKZ2|RS4_CORK4 RecName: Full=30S ribosomal protein S4
 gi|237759247|gb|ACR18497.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385]
          Length = 201

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G   +    R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVG-GDANFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR  + EA R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-IMEKQFRRYYAEAHRRPGKTGDNLMVLLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ VN+ S++  + D+I+V++KS+++    EA + LA+  VP ++ V    +    
Sbjct: 118 FTVNGKKVNVPSFQVSQYDIIDVREKSRKMVWFDEAQEALADAVVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IEVPIQEQLIVEFYSK 201


>gi|71065083|ref|YP_263810.1| 30S ribosomal protein S4 [Psychrobacter arcticus 273-4]
 gi|90101710|sp|Q4FUD2|RS4_PSYA2 RecName: Full=30S ribosomal protein S4
 gi|71038068|gb|AAZ18376.1| SSU ribosomal protein S4P [Psychrobacter arcticus 273-4]
          Length = 213

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 17/218 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPV-----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +             +  PG HG  R     Y  LQLR K
Sbjct: 1   MARYIGPKLKLSRREGTDLGLKSGVKPYDVKTKKSARPPGQHGVSRNKSSEY-SLQLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K+ YG + E++F + +KEA R RG T  NL++ LESRLD +VYR  F  T   ARQ 
Sbjct: 60  QKVKRIYGVL-ERQFANYYKEAARKRGATGENLLAMLESRLDNVVYRMGFGSTRAEARQL 118

Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168
           V+HR V+V          VNI S + ++GDVI +++KS++   +  A +LA +R +PE++
Sbjct: 119 VSHRTVMVKKAGRDEFVRVNIPSIQLQDGDVIAIQEKSREQLRIKNAIELATQRGIPEWL 178

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+H  +  TF + P     +  P  +  +L+VE YS+
Sbjct: 179 DVDHSKLQGTFKKAPDR---IDLPAEINESLIVELYSK 213


>gi|226227380|ref|YP_002761486.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27]
 gi|226090571|dbj|BAH39016.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27]
          Length = 211

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 13/215 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQR--RKSKPSYFGLQL 52
           M++      +  RR G  L+ +       K  ++ R Y PG HGQ   R+ K S +  QL
Sbjct: 1   MARYTGPSCRQCRREGAKLFLKGTKCFTEKCAIDRRPYAPGQHGQATARRKKMSEYAKQL 60

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
           R KQK+K+ YG +SEK+FR+ F +     G T HNL++ LE+RLD +V+R  F P+  AA
Sbjct: 61  REKQKIKRIYG-VSEKQFRNTFDKVATQAGITGHNLVAALETRLDNVVFRMGFAPSRKAA 119

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVN 171
           RQ + HRH+ V GR ++I SY  + G+ + VKQ S++L  V  A + A R     +I+V+
Sbjct: 120 RQLIRHRHIEVKGRQLDIPSYAVRPGEEVRVKQSSRELVLVQGAMEQASRGASLSWIAVD 179

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++     +  P        P+  Q  LVVE YS+
Sbjct: 180 KESFSGRVLEKPQRQA---VPLAAQEQLVVELYSK 211


>gi|15617094|ref|NP_240307.1| 30S ribosomal protein S4 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681846|ref|YP_002468232.1| 30S ribosomal protein S4 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682401|ref|YP_002468785.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471551|ref|ZP_05635550.1| 30S ribosomal protein S4 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11387058|sp|P57567|RS4_BUCAI RecName: Full=30S ribosomal protein S4
 gi|254764574|sp|B8D9S3|RS4_BUCA5 RecName: Full=30S ribosomal protein S4
 gi|254764575|sp|B8D825|RS4_BUCAT RecName: Full=30S ribosomal protein S4
 gi|25294492|pir||A84988 30S ribosomal protein S4 [imported] - Buchnera sp. (strain APS)
 gi|10039159|dbj|BAB13193.1| 30S ribosomal protein S4 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219622134|gb|ACL30290.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624689|gb|ACL30844.1| 30S ribosomal protein S4 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086222|gb|ADP66304.1| 30S ribosomal protein S4 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086799|gb|ADP66880.1| 30S ribosomal protein S4 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087386|gb|ADP67466.1| 30S ribosomal protein S4 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087883|gb|ADP67962.1| 30S ribosomal protein S4 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 206

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR G +L+ +     + ++      PG HG  RK + S + +QLR KQ
Sbjct: 1   MAKYLGPKLKLSRREGTDLFLKSGLRSIESKCKLEQPPGQHG-IRKPRLSDYAIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F+  +K A   +G+T  NL+  LESRLD +VYR  F  T   +RQ +
Sbjct: 60  KVRRLYGVL-ERQFKIYYKLAASLKGNTGANLLQLLESRLDNVVYRMGFGCTRSESRQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           NH+ ++VN + VNI SY+    D I ++ KSK  + +  A +L E R+ P ++ VN   M
Sbjct: 119 NHKSIMVNNKVVNIASYQVSPNDQISIRNKSKNQSRIKAALELVEQREKPIWLEVNSTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +   L+VE YS+
Sbjct: 179 EGIFKRFPERSD---LSAEINEYLIVELYSK 206


>gi|256390172|ref|YP_003111736.1| 30S ribosomal protein S4 [Catenulispora acidiphila DSM 44928]
 gi|256356398|gb|ACU69895.1| ribosomal protein S4 [Catenulispora acidiphila DSM 44928]
          Length = 208

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 112/213 (52%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K  RR    L+ +      PK P+  R Y PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGPDCKRCRREKTKLFLKGSKCDGPKCPIEIRPYPPGEHGRGRTKENEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  ++EA+R  G T  NL+  LESRLD +VYRA F  +   ARQ
Sbjct: 60  KQKTARIYGVL-EKQFRGYYEEANRKGGKTGENLLRILESRLDNVVYRAGFAKSRDHARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H+L+NG   NI S R    D++EV+++S +L   + A ++  ER VP +I V   
Sbjct: 119 LVRHGHILINGHKANIPSMRVTPSDIVEVRKESLELTPFVVARAEAGERAVPAWIEVIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +P           +Q  L+VE YS+
Sbjct: 179 KMRILVHSLPERA---VIDTQVQEQLIVELYSK 208


>gi|317970558|ref|ZP_07971948.1| 30S ribosomal protein S4 [Synechococcus sp. CB0205]
          Length = 202

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KS    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKSA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR V+I SY+CK GDV+ ++++ +         +     ++P ++ ++ +  VA  
Sbjct: 117 VTVNGRVVDIASYQCKAGDVVAIRERKQSKKLAEANLEFPGLANIPPHLELDKNKQVAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      +     + +   LVVE+YSR
Sbjct: 177 IS---KCEREWVALEINELLVVEYYSR 200


>gi|238061095|ref|ZP_04605804.1| 30S ribosomal protein S4 [Micromonospora sp. ATCC 39149]
 gi|237882906|gb|EEP71734.1| 30S ribosomal protein S4 [Micromonospora sp. ATCC 39149]
          Length = 208

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +      PK P  +R + PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR  ++EA   +  T   L+  LESRLD +VYRA +  +   ARQ
Sbjct: 60  KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H  VNG+ V+I SYR KE D+IEV+ KSK+L   + A ++   R VP ++     
Sbjct: 119 LVKHGHFTVNGKKVDIPSYRVKEHDIIEVRGKSKELTPFIVAQAEAGSRTVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +P+          +Q  L+VE YS+
Sbjct: 179 QMKVLVHSLPARQ---VIDTQVQEQLIVELYSK 208


>gi|78357275|ref|YP_388724.1| 30S ribosomal protein S4 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|90101689|sp|Q30Z67|RS4_DESDG RecName: Full=30S ribosomal protein S4
 gi|78219680|gb|ABB39029.1| SSU ribosomal protein S4P [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 208

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K   SK +I RR G  L+ +       K   + R Y PG HG+ RK    Y  +QLR 
Sbjct: 1   MAKYNDSKCRICRREGGKLFLKGDRCYTDKCAFDRRPYAPGQHGRARKKNSDY-AVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+F S F +AD S+G T  NL+S LE RLD ++YR  F  +   ARQ
Sbjct: 60  KQKVRRMYG-LLEKQFHSYFVKADMSKGVTGSNLLSILERRLDNVIYRLGFANSRSQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H    VNGR   I S + K GDVIEV++K++++  + EA + +A R  P ++  +  
Sbjct: 119 MVRHGIFTVNGRKATIPSIQVKVGDVIEVREKNRKMPVIAEAQEVIARRGCPSWLEADGP 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N       +P   +D+ +P  M   L+VE YS+
Sbjct: 179 NFRGVVKALPQR-EDIQFP--MSEQLIVELYSK 208


>gi|237752998|ref|ZP_04583478.1| 30s ribosomal protein s4 [Helicobacter winghamensis ATCC BAA-430]
 gi|229375265|gb|EEO25356.1| 30s ribosomal protein s4 [Helicobacter winghamensis ATCC BAA-430]
          Length = 208

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS ++ R YGPG HGQRR     Y G+QLR 
Sbjct: 1   MARYRGPVEKIERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQRRGKISEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK +  YG +SEK+FR+IF EA+R  G+T  NL+  +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKARMMYG-VSEKQFRAIFVEANRLEGNTGENLVKLIERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G+ ++I S     G  +E+ +K+K+   V  A +L  +  +  ++ V+ D
Sbjct: 119 LVVHGHILVDGKKLDIPSALVGVGQKVEICEKTKKNPQVQRAIELTKQTGIAPWVDVDQD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KVFGIFTRLPEREEVV---IPIEEKLIVELYSK 208


>gi|117927542|ref|YP_872093.1| SSU ribosomal protein S4P [Acidothermus cellulolyticus 11B]
 gi|152060925|sp|A0LRP7|RS4_ACIC1 RecName: Full=30S ribosomal protein S4
 gi|117648005|gb|ABK52107.1| SSU ribosomal protein S4P [Acidothermus cellulolyticus 11B]
          Length = 208

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR    L+ +      PK P+  R Y PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYLGADCKLCRREKMKLFLKGSKCESPKCPIEERPYPPGEHGRTRAKESEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  ++EA R  G T  NL+  LESRLD +VYRA F  +   ARQ
Sbjct: 60  KQKCARIYGVL-EKQFRRYYEEASRKTGRTGENLLRILESRLDNVVYRAGFAASRDQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H H LVNGR V+I SYR  E DVIEV +KS++L   + A  +A ER VP ++ V  +
Sbjct: 119 LVRHGHFLVNGRRVDIPSYRVSENDVIEVAEKSRELTPFVIARAVAGERTVPPWLEVIPN 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +PS          +Q  L+VEFYS+
Sbjct: 179 RLRILVHSLPSRQ---VIDTPVQEQLIVEFYSK 208


>gi|320528307|ref|ZP_08029469.1| ribosomal protein S4 [Solobacterium moorei F0204]
 gi|320131221|gb|EFW23789.1| ribosomal protein S4 [Solobacterium moorei F0204]
          Length = 200

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  ++       +  R+Y PG HG  ++ K   +G QLR KQ+++ 
Sbjct: 1   MARYTGPVWKKARRLSFSI-LETGEELKKRTYAPGQHGPTKRIKLGGYGTQLREKQRIRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F ++F +A +  G    N +  LESRLD IVYR     T  AARQ VNH H
Sbjct: 60  MYG-LNERQFSNLFNKASKMEGMAGVNFLILLESRLDNIVYRMGLARTRKAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ ++I S   K    I V++ ++ + ++ E+ + A   +P ++ V+ +N   TFV
Sbjct: 119 IEVNGKKLDIPSALIKPESTIAVRENARNIKAIAESLESA-ITIPAFVEVDKENKKGTFV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +  +LVVEFY+R
Sbjct: 178 RLPERSE---LNQEINESLVVEFYNR 200


>gi|93005338|ref|YP_579775.1| 30S ribosomal protein S4 [Psychrobacter cryohalolentis K5]
 gi|122415887|sp|Q1QDG2|RS4_PSYCK RecName: Full=30S ribosomal protein S4
 gi|92393016|gb|ABE74291.1| SSU ribosomal protein S4P [Psychrobacter cryohalolentis K5]
          Length = 213

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 17/218 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPV-----NTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +             +  PG HG  R     Y  LQLR K
Sbjct: 1   MARYIGPKLKLSRREGTDLGLKSGVKPYDVKTKKSARPPGQHGVSRNKSSEY-SLQLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K+ YG + E++F + +KEA R RG T  NL++ LESRLD +VYR  F  T   ARQ 
Sbjct: 60  QKVKRIYGVL-ERQFANYYKEAARKRGATGENLLAMLESRLDNVVYRMGFGSTRAEARQL 118

Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168
           V+HR V+V          VNI S + ++GDVI +++KS++   +  A +LA +R +PE++
Sbjct: 119 VSHRTVMVKKAGRDEFIRVNIPSIQLQDGDVIAIQEKSREQLRIKNAIELATQRGIPEWL 178

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+H  +  TF + P     +  P  +  +L+VE YS+
Sbjct: 179 DVDHSKLQGTFKKAPDR---IDLPAEINESLIVELYSK 213


>gi|332178480|gb|AEE14169.1| ribosomal protein S4 [Thermodesulfobium narugense DSM 14796]
          Length = 208

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 114/212 (53%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS+      ++ RR G  L+ +       K   + R   PG+H   R     Y GL+LR 
Sbjct: 1   MSRYTGPVCRLCRREGMKLFLKGDRCLSEKCSFDKRPTPPGMHINTRTKTSEY-GLRLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQKMK++YG I E++FR   + A++  G T  NL   LE RLD ++YR+ F  +   ARQ
Sbjct: 60  KQKMKRFYGLIGERQFRRYVELAEKMGGVTGDNLYFLLERRLDNVLYRSGFASSRQEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            ++H H  VN R V+I SY  K GDVI V++ SK L S      + ER    +I V++D 
Sbjct: 120 MISHGHFNVNSRRVSIPSYSVKPGDVISVRENSKGLFSPEYVEVIKERTPAPWIYVDYDK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F R+P   +     V ++ NL++EFYSR
Sbjct: 180 LEIKFDRLPQREE---LDVPIRENLIIEFYSR 208


>gi|260663356|ref|ZP_05864247.1| 30S ribosomal protein S4 [Lactobacillus fermentum 28-3-CHN]
 gi|260552208|gb|EEX25260.1| 30S ribosomal protein S4 [Lactobacillus fermentum 28-3-CHN]
          Length = 197

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 7/203 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      ++ RR+G +L G  K  +  R Y PG HG  R+ K S +G QLR KQK++ 
Sbjct: 1   MSRYTGPSWRLSRRLGVSLSGTGKE-LARRPYAPGDHGNDRRGKLSEYGTQLREKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + +  T   N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MTERQFSNLFVRAGKIKEGTHGTNFMVLLERRLDNMVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G VI V++KSK L  +  A + A    P Y+  + D +    
Sbjct: 119 HITVDGKRVDIPSYEVKVGQVIAVREKSKNLDVIKGAVE-AVVARPAYVEFDADKLEGKL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVE 202
            R+P           +   L+VE
Sbjct: 178 TRLPQR---EDMNADIDEALIVE 197


>gi|297623301|ref|YP_003704735.1| 30S ribosomal protein S4 [Truepera radiovictrix DSM 17093]
 gi|297164481|gb|ADI14192.1| ribosomal protein S4 [Truepera radiovictrix DSM 17093]
          Length = 205

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M ++     K+ RR G NL   PK    +  R Y PG HGQRR  K S +G++LR KQK+
Sbjct: 1   MGRQRDPIVKLSRREGVNLAETPKVQKYMERRPYPPGQHGQRRSRKLSDYGVRLREKQKL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           ++ Y ++SEK+F ++F EA R +G T    +  LESRLD +V+R     T   ARQFV H
Sbjct: 61  RRLY-NLSEKQFSNLFAEAVRQQGATGGVFLQLLESRLDNVVFRLGIAHTRRQARQFVTH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVA 177
           RH+LVNG+ V++ SYR + GD I V  +S+    +    +  +R  +  ++  + +++  
Sbjct: 120 RHILVNGKVVDVPSYRVRPGDEIAVAPRSRSNEVIKSNVEARKRGRLSPWLEFDSESLKG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            F R+PS  +D+  PV      V+E+YSR
Sbjct: 180 KFQRLPSR-EDITVPV--NELQVIEYYSR 205


>gi|302869943|ref|YP_003838580.1| 30S ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
 gi|315501404|ref|YP_004080291.1| ribosomal protein s4 [Micromonospora sp. L5]
 gi|302572802|gb|ADL49004.1| ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
 gi|315408023|gb|ADU06140.1| ribosomal protein S4 [Micromonospora sp. L5]
          Length = 208

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +      PK P  +R + PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR  ++EA      T   L+  LESRLD +VYRA +  +   ARQ
Sbjct: 60  KQKARRVYGVL-EKQFRGYYEEAVSKEAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173
            V H H  VNG+ V+I SYR KE D+IEV+ KSK+L   L A  +   R VP ++     
Sbjct: 119 LVKHGHFTVNGKKVDIPSYRVKEHDIIEVRAKSKELTPFLVAQGEAGSRTVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +P+          +Q  L+VE YS+
Sbjct: 179 QMKILVHSLPARQ---VIDTQVQEQLIVELYSK 208


>gi|108773320|ref|YP_635875.1| ribosomal protein S4 [Oltmannsiellopsis viridis]
 gi|122195135|sp|Q20EX0|RR4_OLTVI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|82541902|gb|ABB81943.1| ribosomal protein S4 [Oltmannsiellopsis viridis]
          Length = 200

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+GE       S   TR+  PG HG    +K S +G++L+ KQK++ 
Sbjct: 1   MSRYRGPRLRIIRRLGELPGFT--SKTTTRTSSPGQHGGSNFAKSSAYGIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E++  S  K+A R +G T   L+  LE RLD +V+R    PT+ AARQ ++H H
Sbjct: 59  NYG-ITERQLLSYVKKAKRMKGSTGEVLLQLLEMRLDNVVFRLGMAPTVVAARQLISHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VN + V I SY C+  DVI V+ K+     V EA+  A  +VP ++S N +++V    
Sbjct: 118 IVVNDQKVTIPSYACQVKDVISVRAKNNSRKMVTEANSTATANVPSHLSWNKESLVGVVN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++          + +   LVVE+YSR
Sbjct: 178 KVIDRKD---VGLQLNELLVVEYYSR 200


>gi|295425094|ref|ZP_06817799.1| 30S ribosomal protein S4 [Lactobacillus amylolyticus DSM 11664]
 gi|295065153|gb|EFG56056.1| 30S ribosomal protein S4 [Lactobacillus amylolyticus DSM 11664]
          Length = 203

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGVSLSGTGKE-IARRNYAPGQHGTNSRGRLSEYGEQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  AYG-LNERQFRALFARAGKIREGQHGTNFMILLERRLDNIVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A   A    P Y++ + + M  + 
Sbjct: 119 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALD-AVTARPSYVAFDDNKMEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   LVVE+Y++
Sbjct: 178 VRLPERDEMDP---NVNEALVVEWYNK 201


>gi|87302988|ref|ZP_01085792.1| 30S ribosomal protein S4 [Synechococcus sp. WH 5701]
 gi|87282484|gb|EAQ74443.1| 30S ribosomal protein S4 [Synechococcus sp. WH 5701]
          Length = 202

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      KS    R+Y PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKSA--KRAYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE+RLD I +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARAQEGSTGTNLLKLLENRLDNICFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNGR V++ SY+C+ GDVI V+++           +     ++P  + ++ +   A  
Sbjct: 117 ITVNGRVVDVPSYQCRAGDVIVVRERKASRQLAEGNLEFPGLANIPPNLELDKNKFTAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 ++     + +   LVVEFYSR
Sbjct: 177 N---GRIEREWVALEINELLVVEFYSR 200


>gi|88809256|ref|ZP_01124765.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7805]
 gi|88787198|gb|EAR18356.1| 30S ribosomal protein S4 [Synechococcus sp. WH 7805]
          Length = 202

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++++           Q     +VP ++ ++   + A  
Sbjct: 117 VTVNGRVTDIASYQCKPGDVIAIRERKCSKLLAEGNLQFPGLANVPPHLELDKPKLNAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V      +     + +   LVVE+YSR
Sbjct: 177 V---GRCEREWVALEINELLVVEYYSR 200


>gi|160871805|ref|ZP_02061937.1| ribosomal protein S4 [Rickettsiella grylli]
 gi|159120604|gb|EDP45942.1| ribosomal protein S4 [Rickettsiella grylli]
          Length = 206

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR+G +L  +     ++++      PG+    ++ + S +G+ LR KQ
Sbjct: 1   MARYRGPTCKLARRLGTDLQLKSGIRALDSKCKLATPPGM-QPAKRGRLSEYGVLLRQKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
            ++  YG I E++FR  + +A + +G T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  LIRHTYG-ILERQFRLYYTKASKRKGITGENLLKLLECRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
           +HR V VN   VNI SY+ K GDVIE+K+KSK    +  A +L  ++  P +I V+   +
Sbjct: 119 SHRAVKVNSTIVNIPSYQVKVGDVIEIKEKSKSQTRIQAAIELTKQKPQPAWIDVDSTQL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F  IP   +    P+    NLVVE+YS+
Sbjct: 179 QGVFKLIPERSE---LPLEFNENLVVEYYSK 206


>gi|134298120|ref|YP_001111616.1| 30S ribosomal protein S4 [Desulfotomaculum reducens MI-1]
 gi|172044238|sp|A4J138|RS4_DESRM RecName: Full=30S ribosomal protein S4
 gi|134050820|gb|ABO48791.1| SSU ribosomal protein S4P [Desulfotomaculum reducens MI-1]
          Length = 208

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      +  RR G  L+ +       K  ++ RSY PG HGQ RK    Y G+QLRA
Sbjct: 1   MARYTGPHCRQCRREGLKLYLKGDRCYTGKCAIDRRSYAPGQHGQGRKKVSEY-GIQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK FR+ F+ A+R  G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKARRIYGVL-EKPFRNYFEHAERQPGITGENLLRLLERRLDNVVYRLGLGASRVEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  VNG+ VNI S++ + GD I V++KSK    + E  +  A+R  P ++  +  
Sbjct: 119 LVRHGHFTVNGKKVNIPSFQVRVGDEIAVREKSKASPRIKELVERAADRTTPAWLEYDGQ 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 + +PS  +       ++ +L+VE YSR
Sbjct: 179 EAKGRVIALPSRDQ---IDAPVEEHLIVELYSR 208


>gi|221632952|ref|YP_002522175.1| 30S ribosomal protein S4 [Thermomicrobium roseum DSM 5159]
 gi|254764619|sp|B9KZW1|RS4_THERP RecName: Full=30S ribosomal protein S4
 gi|221156886|gb|ACM06013.1| ribosomal protein S4 [Thermomicrobium roseum DSM 5159]
          Length = 217

 Score =  198 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 16/219 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTR----SYGPGLHGQRRK--SKPSYF 48
           M +      ++ RR G  L+ +      PK P+  R    +Y PG HG  ++   +PS F
Sbjct: 1   MGRYIGPVCRLCRREGVKLYLKGERCFGPKCPIVKRHPNKNYPPGQHGPTQRAARRPSEF 60

Query: 49  GLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108
            LQLR KQK+K+ YG I E++FR  F EA+R  G T  NL+  LESRLD +VYR  F  +
Sbjct: 61  ALQLREKQKLKRVYG-ILERQFRRHFDEAERRPGLTGDNLLQILESRLDNVVYRLGFADS 119

Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEY 167
              ARQ V H H LVNGR  +I SY+ + GD+I V+ +S++        + A+   VP +
Sbjct: 120 RRQARQLVRHGHFLVNGRKTDIPSYQVRPGDIIAVRPESRRREYFKVLEETAKNKAVPAW 179

Query: 168 ISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +S + + M    +R+P+  + +  P  +   LVVE+YSR
Sbjct: 180 LSRDLETMSGRVLRLPTRDE-IDIP-PVNTQLVVEYYSR 216


>gi|114778798|ref|ZP_01453605.1| 30S ribosomal protein S4 [Mariprofundus ferrooxydans PV-1]
 gi|114550929|gb|EAU53493.1| 30S ribosomal protein S4 [Mariprofundus ferrooxydans PV-1]
          Length = 209

 Score =  198 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +K ++ RR GE L+ +       K P+  R Y PG+HGQ R++K S +GLQLR 
Sbjct: 1   MARYLEAKCRLCRREGEKLFLKGGKCYSDKCPIERRPYAPGMHGQNRRTKVSDYGLQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR  F +ADR  G T  NL+  LESRLD +VYR     +   ARQ
Sbjct: 61  KQKVKRIYG-LQEKQFRGYFDDADRMPGITGLNLLQILESRLDNVVYRMGLASSRTEARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H+ + VNG  VNI SYR   G  +E+   +K+   V  A++ A  R   E++ V+  
Sbjct: 120 IVRHKLLKVNGGIVNIPSYRVAVGSRLELVDGAKEQLRVNAATEAAGSRGAAEWLDVDLP 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +  +P   +       ++  L+VE YS+
Sbjct: 180 SRQGVYREMPVRDQ---LDSNIREQLIVELYSK 209


>gi|291298741|ref|YP_003510019.1| 30S ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728]
 gi|290567961|gb|ADD40926.1| ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728]
          Length = 208

 Score =  198 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      +  RR    L+ +       K P+ +R + PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGPDCRRCRREKMKLFLKGAKCESAKCPLESRPFPPGQHGRGRPKETEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + EK+F + +KEA+R  G T   L+  LESRLD +VYRA F  +   ARQ
Sbjct: 60  KQKAKRTYGVL-EKQFSNYYKEANRRSGKTGEELLKILESRLDNVVYRAGFAKSRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H +VNGR VNI SYR    D++EV+ KS ++   + A ++  E+  P ++     
Sbjct: 119 LVLHGHFIVNGRKVNIPSYRVTAKDIVEVRPKSVEMTPFVVARAEAGEKKTPAWLESIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +P           +Q  L+VE YS+
Sbjct: 179 KMKILVHNLPERQ---SIDTQVQEQLIVELYSK 208


>gi|237751463|ref|ZP_04581943.1| 30S ribosomal protein S4 [Helicobacter bilis ATCC 43879]
 gi|229372829|gb|EEO23220.1| 30S ribosomal protein S4 [Helicobacter bilis ATCC 43879]
          Length = 208

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR+G +L  +       KS    R YGPG HG  R+ K S +GLQLR 
Sbjct: 1   MARYRGPVEKIERRLGVSLALKGERRLAGKSAREKRDYGPGQHG-MRRGKISDYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIFKEA+R  G+T  NLI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-ISEKQFRSIFKEANRQEGNTGENLIRLLELRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V H H+LV+G+ V+I S++ K+G  +EV++KSK    ++ +  L ++  +  ++ ++ D
Sbjct: 119 LVTHGHILVDGKRVDIPSFQIKQGQKVEVREKSKNNVQIVRSLDLTDQIGIVPWVDIDKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   +     + ++  L+VE YS+
Sbjct: 179 KKFGIFTRNPERSE---VEIPIEERLIVELYSK 208


>gi|78185157|ref|YP_377592.1| 30S ribosomal protein S4 [Synechococcus sp. CC9902]
 gi|116072265|ref|ZP_01469532.1| 30S ribosomal protein S4 [Synechococcus sp. BL107]
 gi|123581244|sp|Q3AWW5|RS4_SYNS9 RecName: Full=30S ribosomal protein S4
 gi|78169451|gb|ABB26548.1| SSU ribosomal protein S4P [Synechococcus sp. CC9902]
 gi|116064787|gb|EAU70546.1| 30S ribosomal protein S4 [Synechococcus sp. BL107]
          Length = 202

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LESRLD I +R  F PT+  +RQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLESRLDNICFRLGFGPTVPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+ K GDV+ +++K                 ++P ++ ++   + A  
Sbjct: 117 VTVNGRVTDIASYQVKPGDVLAIREKKGSKQLAEGNLAFPGLSNIPPHLELDKAKLSAKC 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +     + +   LVVE+YSR
Sbjct: 177 T---GRCEREWVALEINELLVVEYYSR 200


>gi|154148523|ref|YP_001405813.1| 30S ribosomal protein S4 [Campylobacter hominis ATCC BAA-381]
 gi|171769700|sp|A7HZX2|RS4_CAMHC RecName: Full=30S ribosomal protein S4
 gi|153804532|gb|ABS51539.1| ribosomal protein S4 [Campylobacter hominis ATCC BAA-381]
          Length = 208

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS+      K++RR+G +L+ +       KS +  R Y PG HGQ R++K S +G QLR 
Sbjct: 1   MSRYTGPVEKLERRLGVDLFMKGERRLAGKSALLKRPYAPGQHGQ-RRAKVSEYGSQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +FKEA R  G+T   L+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-LSEKQFRRLFKEAARREGNTGEILVQLLEQRLDNLVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G+ V+I SY  K G  IE+ +KSK    +L A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHILVDGKRVDIPSYSVKVGQKIEIAEKSKNNPQILRAVELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KKFGIFTRKPERDEIV---IPIEERFIVELYSK 208


>gi|259501666|ref|ZP_05744568.1| 30S ribosomal protein S4 [Lactobacillus iners DSM 13335]
 gi|259166951|gb|EEW51446.1| 30S ribosomal protein S4 [Lactobacillus iners DSM 13335]
          Length = 208

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   ++K S +G QL+ KQK++ 
Sbjct: 6   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPGNRTKVSEYGEQLKEKQKLRW 64

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++FR++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 65  MFG-LNERQFRNLFVLAGKIREGKHGVNFMIMLEKRLDNVVYRLGLATTREQARQLVNHG 123

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I S++ K G  I +K+KSK L  V +A + A    P +++ +   M  + 
Sbjct: 124 HILVDGKRVDIPSFQVKVGQEISLKEKSKNLQQVKDALE-ATVSRPAFVTFDESKMTGSL 182

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 183 VRLPERDEMEP---EIDESLVVEWYNK 206


>gi|113952789|ref|YP_729847.1| 30S ribosomal protein S4 [Synechococcus sp. CC9311]
 gi|123327937|sp|Q0ICH5|RS4_SYNS3 RecName: Full=30S ribosomal protein S4
 gi|113880140|gb|ABI45098.1| ribosomal protein S4 [Synechococcus sp. CC9311]
          Length = 202

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRIGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR  +I SY+CK GDVI ++++           Q     +VP ++ ++   + A  
Sbjct: 117 VTVNGRVTDIASYQCKAGDVIAIRERKCSKLLAEANLQFPGLANVPPHLELDKPKLSAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      +     + +   LVVE+YSR
Sbjct: 177 I---GRAEREWVALEINELLVVEYYSR 200


>gi|257870579|ref|ZP_05650232.1| ribosomal protein S4 [Enterococcus gallinarum EG2]
 gi|257804743|gb|EEV33565.1| ribosomal protein S4 [Enterococcus gallinarum EG2]
          Length = 203

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      KI RR+G +L    K  +  R Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKISRRLGISLSETGKE-LARRPYAPGQHGPNSRGKKSEYGMQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFRTLFIKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  + G VI V++KS+ ++++ EA +        ++S + + +  + 
Sbjct: 119 HILVDGKRVDIPSYHVEVGQVISVREKSQNISTIKEAIEATTGRT-AFVSFDDEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +       +   LVVEFY
Sbjct: 178 TRLPERDE---LTAEVDEALVVEFY 199


>gi|108804948|ref|YP_644885.1| 30S ribosomal protein S4P [Rubrobacter xylanophilus DSM 9941]
 gi|123068978|sp|Q1AU55|RS4_RUBXD RecName: Full=30S ribosomal protein S4
 gi|108766191|gb|ABG05073.1| SSU ribosomal protein S4P [Rubrobacter xylanophilus DSM 9941]
          Length = 200

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + + DRR G  L    K+P+  + Y PG HG+ R+ +  Y GL+L  KQK + 
Sbjct: 1   MARYTGPRGRRDRRAGVMLSSMRKNPLEKKPYPPGEHGRDRQRQTEY-GLRLMEKQKARW 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG +SE++FR  ++EA R  G +  NL+  +E R+D +VYR  F  +   ARQ V H H
Sbjct: 60  YYG-VSERQFRRAYEEAIRQPGVSGENLLRLMELRMDNVVYRMGFATSRPQARQLVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
            L+NGR  NI S   K GDVI V+ KS++L  + EA +     VP ++  +H+N     +
Sbjct: 119 FLLNGRKHNIPSATLKPGDVITVRDKSRRLQPIQEAVEQV-VAVPAWLEADHENFTGRVL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             PS  +       ++  L++EFYSR
Sbjct: 178 HTPSRDE---IDAPVEEQLIIEFYSR 200


>gi|149197866|ref|ZP_01874915.1| 30S ribosomal protein S4 [Lentisphaera araneosa HTCC2155]
 gi|149139087|gb|EDM27491.1| 30S ribosomal protein S4 [Lentisphaera araneosa HTCC2155]
          Length = 205

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           M K   +K KI RR G NL+G  K    +  R   PG+HG    + K S +G QL  KQK
Sbjct: 1   MGKYSGNKGKICRRFGVNLFGNMKYDKVLAKRPNPPGVHGANAARKKLSEYGKQLVEKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +K  YG + EK+FR  F  A +  G T +NL+  LE+RLD +VYR  F PT  AARQ V 
Sbjct: 61  LKITYG-LREKQFRITFDRAAKLSGVTGNNLMVLLEARLDNVVYRLGFAPTRSAARQLVG 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H H+ +NGR  NI SY  + GDV+ +K  S+  A V      A  + PE++S+  D +  
Sbjct: 120 HGHIRINGRRCNIPSYSVRPGDVVSLKDSSRSKALVQRFLDGARGETPEWVSLIKDELKG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             VR+P   +    P +    +VVE YS+
Sbjct: 180 EIVRLPEREE---IPSVADELMVVELYSK 205


>gi|240047378|ref|YP_002960766.1| 30S ribosomal protein S4 [Mycoplasma conjunctivae HRC/581]
 gi|239984950|emb|CAT04943.1| 30S ribosomal protein S4 [Mycoplasma conjunctivae]
          Length = 206

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+      K  RR+G ++    K       R Y PG HG  R+ K S +G+ L+ KQK+
Sbjct: 1   MSRYTGPVFKKSRRLGFSILESGKEFVKGKQRKYAPGQHGPTRRYKLSDYGIHLQEKQKV 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG +SEK+FR+ F +A +  G    N +  LESR D +VYR+ F  T   ARQ VNH
Sbjct: 61  RFMYG-VSEKQFRNTFNKAIKKPGIAGTNFLQALESRFDNVVYRSGFAETRKQARQLVNH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGD--VIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
            H L+NG+ VNI S + K GD   +  K++ K   +V   S L ++ +  ++ V+  N  
Sbjct: 120 GHFLLNGKKVNIPSIQLKPGDSFELTSKKEGKIRKNVQILSALEKKTIASWVEVDVKNFK 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A  +R+P   +       ++ +L+VEFYS+
Sbjct: 180 AKLIRLPERSE---LNQEIKESLIVEFYSK 206


>gi|296141063|ref|YP_003648306.1| ribosomal protein S4 [Tsukamurella paurometabola DSM 20162]
 gi|296029197|gb|ADG79967.1| ribosomal protein S4 [Tsukamurella paurometabola DSM 20162]
          Length = 201

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G        R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLGVDLVGGS-EAFERRPYPPGQHGRARVKESEYL-LQLKEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   ++EA  + G T   L+  LE+RLD +VYRA    T   ARQ V H H
Sbjct: 59  LYG-VMEKQFSRYYQEAKTASGKTGDALLQILETRLDNVVYRAGLARTRRQARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
             VNG  V++ SYR  + D+I+V+ KS        A +   ER    ++ V    +    
Sbjct: 118 FTVNGVRVDVPSYRVSQYDIIDVRPKSLGTTPFQIARETVGERTPAAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +     V  Q  L+VE+YS+
Sbjct: 178 HRVPEREQ---IDVPFQEQLIVEYYSK 201


>gi|226968687|ref|YP_002808647.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299]
 gi|226431165|gb|ACO55571.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299]
          Length = 198

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M++    + KI RR+GE      K P   R+YGPG HGQ     K + F ++L+ KQK++
Sbjct: 1   MARYRGPRVKIVRRLGELPGLTTKVP--NRTYGPGQHGQATSTGKLTQFRVRLQEKQKLR 58

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG ISEK+  +  + A R++G T   L+  LE RLD+IVYR  F PTI AARQ+V+H 
Sbjct: 59  YNYG-ISEKQLLTYVRRARRAKGPTGEVLLQMLEMRLDSIVYRLGFAPTIRAARQYVSHG 117

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
            + VNG++VNI SY C  G+ I     +     V+E  +     VP +++V+        
Sbjct: 118 LITVNGQTVNIPSYNCLPGETI-----ASTSNPVVENCKTFGGAVPSHLTVDTAKTTGKI 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+ +  +     + +   L++EFYSR
Sbjct: 173 QRVITRSQ---IALTVNELLIIEFYSR 196


>gi|302524021|ref|ZP_07276363.1| ribosomal protein S4 [Streptomyces sp. AA4]
 gi|302432916|gb|EFL04732.1| ribosomal protein S4 [Streptomyces sp. AA4]
          Length = 201

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +I RR+  +L G  +     R Y PG HG+ R  +  Y  LQ + KQK + 
Sbjct: 1   MARYTGPATRISRRLKVDLIGGDQ-AFERRPYPPGQHGRGRIKESEYL-LQSQEKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++F   +KEA R  G T  NL+  LESRLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFVRYYKEAVRRPGKTGENLLQILESRLDNVIYRAGIARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG  VN+ SY+  + D+I+V+ KS  +   + A +   ER VP ++ V   N+    
Sbjct: 118 FLVNGVKVNVPSYQVTKWDIIDVRPKSMGMLPFVAAKEAFGERPVPAWLQVVPSNLRVLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPVQEQLIVELYSK 201


>gi|145596407|ref|YP_001160704.1| ribosomal protein S4 [Salinispora tropica CNB-440]
 gi|145305744|gb|ABP56326.1| SSU ribosomal protein S4P [Salinispora tropica CNB-440]
          Length = 208

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +      PK P  +R + PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR  ++EA   +  T   L+  LESRLD +VYRA +  +   ARQ
Sbjct: 60  KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H +VNG+ V+I SYR KE D++EV+ KSK+L   L A ++   + VP ++     
Sbjct: 119 LVKHGHFVVNGKKVDIPSYRVKEHDIVEVRGKSKELTPFLVAQAESGSKSVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +PS          +Q  L+VE YS+
Sbjct: 179 QMKVLVHSLPSRQ---VIDTQVQEQLIVELYSK 208


>gi|126656084|ref|ZP_01727468.1| 30S ribosomal protein S4 [Cyanothece sp. CCY0110]
 gi|126622364|gb|EAZ93070.1| 30S ribosomal protein S4 [Cyanothece sp. CCY0110]
          Length = 202

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+P   R+Y PG HGQ R+ +  Y  ++L  KQK+  
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQGRRKRSEY-AIRLEEKQKLLY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     K+A RS   T   L+  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VTEKQLVRYMKKARRSTDSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V+VNGR VNI SY+C+ GDVI V+ K      V    Q     ++PE++  + + +    
Sbjct: 117 VMVNGRVVNIASYQCRPGDVISVRNKDNSRRMVETNMQYPGLANLPEHLEFDKNTLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NNVIKR---EWVALQINELLVVEYYSR 200


>gi|257866598|ref|ZP_05646251.1| ribosomal protein S4 [Enterococcus casseliflavus EC30]
 gi|257872886|ref|ZP_05652539.1| ribosomal protein S4 [Enterococcus casseliflavus EC10]
 gi|257876202|ref|ZP_05655855.1| ribosomal protein S4 [Enterococcus casseliflavus EC20]
 gi|325567299|ref|ZP_08143966.1| 30S ribosomal protein S4 [Enterococcus casseliflavus ATCC 12755]
 gi|257800556|gb|EEV29584.1| ribosomal protein S4 [Enterococcus casseliflavus EC30]
 gi|257807050|gb|EEV35872.1| ribosomal protein S4 [Enterococcus casseliflavus EC10]
 gi|257810368|gb|EEV39188.1| ribosomal protein S4 [Enterococcus casseliflavus EC20]
 gi|325158732|gb|EGC70878.1| 30S ribosomal protein S4 [Enterococcus casseliflavus ATCC 12755]
          Length = 203

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 7/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      KI RR+G +L    K  +  R Y PG HG   + K S +G+QL  KQK++ 
Sbjct: 1   MSRYTGPSWKISRRLGISLSETGKE-LARRPYAPGQHGPNSRGKKSEYGMQLTEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFRTLFIKASKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HVLV+G+ V+I SY  + G VI V++KS+ ++++ EA + A      ++S + + +  + 
Sbjct: 119 HVLVDGKRVDIPSYHVEVGQVISVREKSQNISTIKEAVE-ATAGRASFVSFDSEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            R+P   +       +   LVVEFY
Sbjct: 178 TRLPERDE---LSAEVDEALVVEFY 199


>gi|224417910|ref|ZP_03655916.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491]
 gi|253827249|ref|ZP_04870134.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491]
 gi|313141451|ref|ZP_07803644.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491]
 gi|253510655|gb|EES89314.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491]
 gi|313130482|gb|EFR48099.1| 30S ribosomal protein S4 [Helicobacter canadensis MIT 98-5491]
          Length = 208

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS ++ R YGPG HGQRR     Y G+QLR 
Sbjct: 1   MARYRGPVEKIERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQRRGKISEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK +  YG +SEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKARLMYG-VSEKQFRSIFVEANRLEGNTGENLIKLIERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G+ +NI S     G  IE+ +K+K+   +  A +L  +  +  ++ V+ +
Sbjct: 119 LVVHGHILVDGKRLNIPSAFVSAGQKIEICEKTKKNPQIQRAIELTKQTGIVPWVDVDQE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KVFGIFTRLPEREEVV---IPIEERLIVELYSK 208


>gi|148284289|ref|YP_001248379.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Boryong]
 gi|172047212|sp|A5CCV1|RS4_ORITB RecName: Full=30S ribosomal protein S4
 gi|146739728|emb|CAM79558.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Boryong]
          Length = 207

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 94/206 (45%), Positives = 135/206 (65%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAKQKMK 59
           M+K   SK+K+ RR+G ++WG  K  +N ++Y PG  G          +   L AKQ++K
Sbjct: 1   MTKVIKSKYKVSRRLGTSVWGHEKDAINNKNYKPGQQGNSSSISKPSDYSKHLIAKQRLK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +YG ISEK+FR+ FK A +  G+T+ NL+  LE RLD +VYR    PTIFAARQ V+H+
Sbjct: 61  SHYGRISEKQFRNTFKIARKKSGNTAENLVGLLERRLDAVVYRLNIAPTIFAARQLVSHK 120

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ +NI SYR K GD IE+ +++KQ+  V+ A     R +PEY++ + +  +  F
Sbjct: 121 HIKVNGKKINIASYRVKAGDSIELSEQAKQIPIVIGAISKKARRIPEYLAFDDEKFIGNF 180

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205
           +R+PSS+ +VPYP   Q NLVVEFYS
Sbjct: 181 IRMPSSISEVPYPFDPQINLVVEFYS 206


>gi|296137040|ref|YP_003644282.1| ribosomal protein S4 [Thiomonas intermedia K12]
 gi|294341217|emb|CAZ89618.1| 30S ribosomal subunit protein S4 [Thiomonas sp. 3As]
 gi|295797162|gb|ADG31952.1| ribosomal protein S4 [Thiomonas intermedia K12]
          Length = 207

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS----PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++   +K K+ RR G +L+ +               PG HG+   ++ S +G QLR KQ
Sbjct: 1   MARFIGAKGKLTRREGADLFLKSARRGIDSKVKLETKPGQHGRTSGARTSDYGKQLREKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + E++FR  ++EA R  G+T  NL+  LESRLD +VYR  +  T   ARQ V
Sbjct: 61  KVKRMYGVL-ERQFRRYYEEAQRRSGNTGTNLLMLLESRLDNVVYRMGYGSTRAEARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNM 175
           +HR + VNG+ +NI S   K GDV+ V++KS+  A + E+ +LAE +  P ++ V+   M
Sbjct: 120 SHRSITVNGKVLNIPSALVKTGDVVAVREKSRNQARIQESVKLAESNGFPAWVQVDGAKM 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F + P   +   +   +  +L++E YSR
Sbjct: 180 EGVFKKAPDRDE---FGNDINESLIIELYSR 207


>gi|11467355|ref|NP_043212.1| ribosomal protein S4 [Cyanophora paradoxa]
 gi|1350893|sp|P48133|RR4_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S4
 gi|1016156|gb|AAA81243.1| ribosomal protein S4 [Cyanophora paradoxa]
          Length = 201

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+ +    +I RR+GE L G  +  V  R Y PG HGQ+ + +  Y  ++L  KQK++ 
Sbjct: 1   MSRYKGPSLRIIRRLGE-LPGLTRKVVKKRKYPPGQHGQKSRKRSEY-AIRLEEKQKLRY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++     + A + +G T   L+  LE RLD IV+R    PTI A+RQ VNH H
Sbjct: 59  NYG-LTERQLVQCVRRAKQMKGSTGQILLQLLEMRLDNIVFRLGMAPTIPASRQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VN + V+I SY+CK GD+I VK+++     V          ++P ++  +   +    
Sbjct: 118 ICVNNKVVSIPSYQCKPGDIITVKERNASKKIVETNLLFPGLANLPSHLEFDKSKLQGKV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   L+VEFYSR
Sbjct: 178 NDIIQR---EWVALEVNELLIVEFYSR 201


>gi|78776527|ref|YP_392842.1| 30S ribosomal protein S4 [Sulfurimonas denitrificans DSM 1251]
 gi|90101735|sp|Q30TS4|RS4_SULDN RecName: Full=30S ribosomal protein S4
 gi|78497067|gb|ABB43607.1| SSU ribosomal protein S4P [Sulfurimonas denitrificans DSM 1251]
          Length = 208

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS +  R Y PG HGQRRK    Y GLQL  
Sbjct: 1   MARYRGPVEKIERRFGVSLNLKGERRLAGKSALEKRPYAPGQHGQRRKKVSEY-GLQLNE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR++F EA R  G+T  NL++ +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRALFVEAKRREGNTGTNLVTLIEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G  ++I SYR + G  IE+++ SK  + ++ A +L  +  +  ++ ++ D
Sbjct: 119 LVTHGHLLVDGAKLDIPSYRVRPGQKIEIRESSKNNSQIVRALELTNQTGLAPWVDIDAD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KKFGIFTRLPEREEVV---IPVEERLIVELYSK 208


>gi|172035133|ref|YP_001801634.1| 30S ribosomal protein S4 [Cyanothece sp. ATCC 51142]
 gi|254764582|sp|B1X067|RS4_CYAA5 RecName: Full=30S ribosomal protein S4
 gi|171696587|gb|ACB49568.1| 30S ribosomal protein S4 [Cyanothece sp. ATCC 51142]
          Length = 202

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+P   R+Y PG HGQ R+ +  Y  ++L  KQK+  
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQGRRKRSEY-AIRLEEKQKLLY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     K+A RS   T   L+  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VTEKQLVRYMKKARRSTDSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V+VNGR VNI SY+C+ GDVI V+ K      V    Q     ++P+++  + + +    
Sbjct: 117 VIVNGRVVNIASYQCRPGDVISVRNKDNSRRMVETNMQYPGLANLPDHLEFDKNTLTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NDVIKR---EWVALQINELLVVEYYSR 200


>gi|29653614|ref|NP_819306.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 493]
 gi|154706831|ref|YP_001425158.1| 30S ribosomal protein S4 [Coxiella burnetii Dugway 5J108-111]
 gi|161831288|ref|YP_001596209.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 331]
 gi|212213226|ref|YP_002304162.1| 30S ribosomal protein S4 [Coxiella burnetii CbuG_Q212]
 gi|41017834|sp|Q83EQ3|RS4_COXBU RecName: Full=30S ribosomal protein S4
 gi|189045376|sp|A9KD07|RS4_COXBN RecName: Full=30S ribosomal protein S4
 gi|189045377|sp|A9NAZ4|RS4_COXBR RecName: Full=30S ribosomal protein S4
 gi|226697830|sp|B6J239|RS4_COXB2 RecName: Full=30S ribosomal protein S4
 gi|29540876|gb|AAO89820.1| SSU ribosomal protein S4P [Coxiella burnetii RSA 493]
 gi|154356117|gb|ABS77579.1| SSU ribosomal protein S4P [Coxiella burnetii Dugway 5J108-111]
 gi|161763155|gb|ABX78797.1| ribosomal protein S4 [Coxiella burnetii RSA 331]
 gi|212011636|gb|ACJ19017.1| SSU ribosomal protein S4P [Coxiella burnetii CbuG_Q212]
          Length = 206

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K ++ RR   +L  +     ++++      PG+H Q R+ + + +G+QLR KQ
Sbjct: 1   MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQ-RRGRTTDYGVQLRMKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
            +K+YY  + EK+F + +K+ADR +G T  NL+  LESRLD +VYR  F  T   ARQ +
Sbjct: 60  MIKRYYDVL-EKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFAATRAEARQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
           +H+ +LVNG  VNI SY+ K GD+IEV+ ++K    +  A +LA++  P  +I V+   M
Sbjct: 119 SHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLRIKGALELAQQRAPISWIEVDTKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P   +    P   + NLVVE YS+
Sbjct: 179 TGTFKEQPDVAE---LPAEFKVNLVVELYSK 206


>gi|289608314|emb|CBI60616.1| unnamed protein product [Sordaria macrospora]
          Length = 190

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 118/192 (61%), Positives = 144/192 (75%), Gaps = 3/192 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MSKR S+K+K+DRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG QLRAKQK+K 
Sbjct: 1   MSKRSSAKYKLDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYGD++EK+F+  ++EA R +GDT  NLI  LE RLD IVYRAKF PT++AARQ V+H H
Sbjct: 61  YYGDVTEKQFKRTYEEASRMKGDTGQNLIGLLEQRLDMIVYRAKFAPTVWAARQLVSHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG   NI S RC  GD I +  K++++A VLEA  LAERD+PEYI  +      TF 
Sbjct: 121 VRVNGVKCNIASRRCYVGDEISLGTKAQEMALVLEAQTLAERDIPEYIGADGTK--VTFN 178

Query: 181 RIPSSLKDVPYP 192
           R+P+ L +VPYP
Sbjct: 179 RVPT-LDEVPYP 189


>gi|312880344|ref|ZP_07740144.1| SSU ribosomal protein S4P [Aminomonas paucivorans DSM 12260]
 gi|310783635|gb|EFQ24033.1| SSU ribosomal protein S4P [Aminomonas paucivorans DSM 12260]
          Length = 208

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS+      ++ R  G  L+ +       +  +  R+  PG HG  R++K S +GL+LR 
Sbjct: 1   MSRYTGPVCRLCRAEGTKLFLKGDRCYTERCAMAKRNSKPGQHG-TRRTKTSEYGLRLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++++YG ++E +F  I+++A    G T H+ +  LE RLD +VYR     +   AR+
Sbjct: 60  KQKLRRFYG-LNESQFAQIYEKAAAMPGQTGHDFLQLLERRLDNVVYRLGLAVSRRQARE 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H LVNGR ++I S   + GDV+ V++KS+ +A +   ++  A R VP ++ +N +
Sbjct: 119 LVRHGHFLVNGRKLDIPSAVLRAGDVVSVREKSRDVAVLKGNAEVAASRAVPAWLEINGE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M    V +P   +     V +   LVVEFY+R
Sbjct: 179 AMSGRVVTLPVREQ---IEVPVNEQLVVEFYAR 208


>gi|317131397|ref|YP_004090711.1| ribosomal protein S4 [Ethanoligenens harbinense YUAN-3]
 gi|315469376|gb|ADU25980.1| ribosomal protein S4 [Ethanoligenens harbinense YUAN-3]
          Length = 208

 Score =  197 bits (502), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  K+ RR G+ L+ +       K  V  RSY PG HGQ RK    Y G+QLRA
Sbjct: 1   MARYTDSVCKLCRREGQKLFLKGERCYSDKCSVGRRSYAPGQHGQDRKKVSEY-GIQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++YYG + E++FR  F+ A+   G T  NL+  LE RLD +VYR  F  +   +RQ
Sbjct: 60  KQKARRYYGVL-ERQFRHYFEIAESKPGITGENLLRLLELRLDNVVYRLGFASSHAQSRQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H  +NG+  NI S R + GDV+ VK+ S+    +    +  A R +P+++ +N +
Sbjct: 119 MVRHGHFTINGKKANIPSMRVRVGDVVAVKEGSRTNEFIKSVVEANASRPIPKWLEINRE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  T   +P+        + ++ +L+VE YS+
Sbjct: 179 ALSGTVAVLPNR---EDIDLSVEEHLIVELYSK 208


>gi|319948696|ref|ZP_08022817.1| 30S ribosomal protein S4 [Dietzia cinnamea P4]
 gi|319437598|gb|EFV92597.1| 30S ribosomal protein S4 [Dietzia cinnamea P4]
          Length = 201

 Score =  197 bits (502), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G   +    R + PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLGVDLVG-GDTAFERRPFPPGHHGRARIKESEYR-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V H H
Sbjct: 59  TYG-VMEKQFRRYYEEANRRAGKTGENLLQILESRLDNVVYRAGLARTRRQARQLVAHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVN + V I SYR  + D+I+V+ KS ++     A + L ER VP ++ V    +    
Sbjct: 118 FLVNDQKVTIPSYRVSQYDIIDVRPKSTKMDWFEIAQETLGERPVPAWLQVVPTTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IEVPLQEQLIVELYSK 201


>gi|257095016|ref|YP_003168657.1| 30S ribosomal protein S4 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047540|gb|ACV36728.1| ribosomal protein S4 [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 209

 Score =  197 bits (502), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    K +  RR GE L+ +       K  +  RSY PG HGQ+   + S +G+ LR 
Sbjct: 1   MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRSYAPGQHGQKSGQRLSDYGVHLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR ++KEADR RG T   L+  LESRLD++ YR  F  +   +RQ
Sbjct: 61  KQKIRRIYGVL-EGQFRKVYKEADRRRGVTGEVLLQLLESRLDSVAYRMGFAASRSESRQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHD 173
            V H  VLVNGR VNI SY+ + GDV+EV +K+K    V    +    R  PE++ V+  
Sbjct: 120 VVRHNGVLVNGRRVNIPSYQVRPGDVVEVCEKAKAHLRVKAALAAAEARGFPEWVEVDAK 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +   P   +    P  +  +LV+E YS+
Sbjct: 180 AAKGVYKAHPERSE---LPPTINESLVIELYSK 209


>gi|238898903|ref|YP_002924585.1| 30S ribosomal subunit protein S4 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259495283|sp|C4K794|RS4_HAMD5 RecName: Full=30S ribosomal protein S4
 gi|229466663|gb|ACQ68437.1| 30S ribosomal subunit protein S4 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 206

 Score =  197 bits (502), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      K+ RR G +L+ +     + T+      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPNLKLSRREGTDLFLKSGVRAIETKCKIDQPPGQHG-TRKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++F   +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRVYGVL-ERQFHGYYKEAARLKGNTGENLLQLLERRLDNVVYRIGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNM 175
            H+ +LVN R VNI S+     D + V++K+++ + + E+ QL A+R+   ++ ++   M
Sbjct: 119 THKAILVNDRVVNIPSFLVSPNDRVSVRRKAQKQSRIKESLQLSAQREELSWLEIDSSEM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + TF  IP           +  +L+VE YS+
Sbjct: 179 IGTFKFIPERA---VISGGIDEHLIVELYSK 206


>gi|226356866|ref|YP_002786606.1| 30S ribosomal protein S4 [Deinococcus deserti VCD115]
 gi|259495272|sp|C1CXD5|RS4_DEIDV RecName: Full=30S ribosomal protein S4
 gi|226318856|gb|ACO46852.1| putative 30S ribosomal protein S4 [Deinococcus deserti VCD115]
          Length = 206

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 120/210 (57%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           M +   S  K+ RR G NL    K    ++ R Y PG HGQRR + +PS + ++LR KQK
Sbjct: 1   MGRFRGSITKLSRREGINLAETEKVQKYLDKRPYAPGQHGQRRGRGRPSDYSVRLREKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           + + YG + EK+FR++F+EA    G T    +  LE RLD +V+R  F  T   ARQFV 
Sbjct: 61  LARLYG-MGEKQFRNLFEEAASVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVG 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMV 176
           H H+LVNG+ V+I SYR K GD I V + S+Q+  V E  +    R V  ++ ++ +N  
Sbjct: 120 HGHILVNGKKVDIPSYRVKIGDEISVFEGSRQMGFVQENMEAQKRRRVSPWVELDVENFK 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            TF R+P+        + +  N ++E+YSR
Sbjct: 180 GTFSRLPAR---EDLALPINENFIIEYYSR 206


>gi|163791292|ref|ZP_02185706.1| 30S ribosomal protein S4 [Carnobacterium sp. AT7]
 gi|159873433|gb|EDP67523.1| 30S ribosomal protein S4 [Carnobacterium sp. AT7]
          Length = 201

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   + K + +GLQL+ KQK++ 
Sbjct: 1   MSRYTGPSWKVSRRLGISLSGTGKE-IERRPYAPGPHGPNSRKKLTEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++F ++F +A + +      N +  LE RLD +VYR     T   +RQ VNH 
Sbjct: 60  MFG-MNERQFSNLFLKAGKIKEGKHGENFMILLEQRLDNVVYRLGLATTRRQSRQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY    G VI V++KSK +  +  A++      P+Y++ + + +  ++
Sbjct: 119 HILVDGKRVDIPSYSVSVGQVISVREKSKNMEIIKSAAESL-FGRPDYVTFDVEKLEGSY 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +   ++VE+YSR
Sbjct: 178 NRLPLRDE---LSAEIDETIIVEYYSR 201


>gi|313885082|ref|ZP_07818834.1| ribosomal protein S4 [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619773|gb|EFR31210.1| ribosomal protein S4 [Eremococcus coleocola ACS-139-V-Col8]
          Length = 201

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L    K  ++ R Y PG HG  R  K + +G QL  KQK++ 
Sbjct: 1   MARYTGPAWKKSRRLGISLTETGKE-LSRRPYAPGQHGNAR-HKVTEYGAQLNEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR++F +A +  G    N +  LE+RLD +VYR  +  T   ARQ V H H
Sbjct: 59  MYG-LNERQFRTLFTKAAKMEGKHGENFMVILETRLDNLVYRLGYASTRRQARQLVAHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G+ V+I SY  K   VI ++++S+ LA + E  +     + +++S + +N      
Sbjct: 118 ITVDGQRVDIPSYLVKPEQVIGLRERSQDLAIIKENLEAVVSRL-DFVSFDENNKEGKMT 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   LVVE+Y++
Sbjct: 177 RLPERGE---LSAEIDEALVVEYYNK 199


>gi|302191126|ref|ZP_07267380.1| 30S ribosomal protein S4 [Lactobacillus iners AB-1]
 gi|309803253|ref|ZP_07697350.1| ribosomal protein S4 [Lactobacillus iners LactinV 11V1-d]
 gi|309804768|ref|ZP_07698832.1| ribosomal protein S4 [Lactobacillus iners LactinV 09V1-c]
 gi|309806291|ref|ZP_07700304.1| ribosomal protein S4 [Lactobacillus iners LactinV 03V1-b]
 gi|309808534|ref|ZP_07702432.1| ribosomal protein S4 [Lactobacillus iners LactinV 01V1-a]
 gi|309809939|ref|ZP_07703787.1| ribosomal protein S4 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871661|ref|ZP_07731753.1| ribosomal protein S4 [Lactobacillus iners LEAF 3008A-a]
 gi|312871931|ref|ZP_07732013.1| ribosomal protein S4 [Lactobacillus iners LEAF 2062A-h1]
 gi|312873253|ref|ZP_07733309.1| ribosomal protein S4 [Lactobacillus iners LEAF 2052A-d]
 gi|312874615|ref|ZP_07734639.1| ribosomal protein S4 [Lactobacillus iners LEAF 2053A-b]
 gi|325911708|ref|ZP_08174115.1| ribosomal protein S4 [Lactobacillus iners UPII 143-D]
 gi|325913026|ref|ZP_08175399.1| ribosomal protein S4 [Lactobacillus iners UPII 60-B]
 gi|329921128|ref|ZP_08277651.1| ribosomal protein S4 [Lactobacillus iners SPIN 1401G]
 gi|308164761|gb|EFO67011.1| ribosomal protein S4 [Lactobacillus iners LactinV 11V1-d]
 gi|308165878|gb|EFO68097.1| ribosomal protein S4 [Lactobacillus iners LactinV 09V1-c]
 gi|308167275|gb|EFO69441.1| ribosomal protein S4 [Lactobacillus iners LactinV 03V1-b]
 gi|308168211|gb|EFO70331.1| ribosomal protein S4 [Lactobacillus iners LactinV 01V1-a]
 gi|308169727|gb|EFO71772.1| ribosomal protein S4 [Lactobacillus iners SPIN 2503V10-D]
 gi|311089845|gb|EFQ48265.1| ribosomal protein S4 [Lactobacillus iners LEAF 2053A-b]
 gi|311091264|gb|EFQ49652.1| ribosomal protein S4 [Lactobacillus iners LEAF 2052A-d]
 gi|311092508|gb|EFQ50870.1| ribosomal protein S4 [Lactobacillus iners LEAF 2062A-h1]
 gi|311092886|gb|EFQ51238.1| ribosomal protein S4 [Lactobacillus iners LEAF 3008A-a]
 gi|325476474|gb|EGC79633.1| ribosomal protein S4 [Lactobacillus iners UPII 143-D]
 gi|325477706|gb|EGC80845.1| ribosomal protein S4 [Lactobacillus iners UPII 60-B]
 gi|328935035|gb|EGG31524.1| ribosomal protein S4 [Lactobacillus iners SPIN 1401G]
          Length = 203

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   ++K S +G QL+ KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPGNRTKVSEYGEQLKEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++FR++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MFG-LNERQFRNLFVLAGKIREGKHGVNFMIMLEKRLDNVVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I S++ K G  I +K+KSK L  V +A + A    P +++ +   M  + 
Sbjct: 119 HILVDGKRVDIPSFQVKVGQEISLKEKSKNLQQVKDALE-ATVSRPAFVTFDESKMTGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 178 VRLPERDEMEP---EIDESLVVEWYNK 201


>gi|172040040|ref|YP_001799754.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109]
 gi|226697828|sp|B1VEY1|RS4_CORU7 RecName: Full=30S ribosomal protein S4
 gi|171851344|emb|CAQ04320.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109]
          Length = 201

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +S    R Y PG  G+ R  +  Y  +QL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLRVDLVGGDRS-FERRPYPPGQAGRARIKESEYL-IQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+   G T  NL+  LE+RLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYAEANAMPGKTGDNLVILLEARLDNVIYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ +N+ S+R  + D+I+V+ +S+ +    EA   L + +VP ++ V    +    
Sbjct: 118 FTVNGKKINVPSFRVSQYDIIDVRDRSRSMLWFDEAQDNLVDANVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VE+YS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEYYSK 201


>gi|124514417|gb|EAY55930.1| ribosomal protein S4 [Leptospirillum rubarum]
 gi|206602702|gb|EDZ39183.1| Ribosomal protein S4 [Leptospirillum sp. Group II '5-way CG']
          Length = 209

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 119/214 (55%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  +  RR G  L+ +       K  ++ RSY PG HGQ R +K S +GLQLR 
Sbjct: 1   MARYRGSVCRFCRREGVKLFLKGVRCLSTKCAIDRRSYPPGQHGQSR-AKISDYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ +G + EK+FR+ F+ A R +G T  +L+S LE RLD++VYR     +   AR 
Sbjct: 60  KQKVKRIFGVL-EKQFRNAFERASRKKGVTGESLLSGLELRLDSVVYRMGLGTSRNEARM 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNH 172
            V H H+ VNGR VNI S++CK  DVI ++ KS+      E  + AE    +P ++ V  
Sbjct: 119 LVTHGHLEVNGRKVNIPSFQCKVSDVISLRTKSRSNERFKENLRDAETRGVIPSWLDVQK 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   A     P   +     +++  NL+VE YSR
Sbjct: 179 EQFSAVVREQPKREE---INILISENLIVELYSR 209


>gi|242309344|ref|ZP_04808499.1| 30S ribosomal protein S4 [Helicobacter pullorum MIT 98-5489]
 gi|239523915|gb|EEQ63781.1| 30S ribosomal protein S4 [Helicobacter pullorum MIT 98-5489]
          Length = 208

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS ++ R YGPG HGQRR     Y G+QLR 
Sbjct: 1   MARYRGPVEKIERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQRRGKISEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK +  YG +SEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKARMMYG-VSEKQFRSIFVEANRLEGNTGENLIKLIERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G+ +NI S     G  IE+ +K+K+   +  A +L  +  +  ++ V+ +
Sbjct: 119 LVVHGHILVDGKRLNIPSAFVNAGQKIEICEKTKKNPQIQRAIELTKQTGIVPWVDVDQE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KVFGIFTRLPEREEVV---IPIEERLIVELYSK 208


>gi|33862500|ref|NP_894060.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9313]
 gi|124023809|ref|YP_001018116.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9303]
 gi|41017827|sp|Q7V8U9|RS4_PROMM RecName: Full=30S ribosomal protein S4
 gi|152112246|sp|A2CBJ1|RS4_PROM3 RecName: Full=30S ribosomal protein S4
 gi|33640613|emb|CAE20402.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9313]
 gi|123964095|gb|ABM78851.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9303]
          Length = 202

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RS+ PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSHPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARAQDGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR ++I SY+CK GDV+ ++++           +     +VP +I ++   M A  
Sbjct: 117 VTVNGRVLDIASYQCKAGDVVAIRERKGSKKLAEANLEFPGLANVPPHIELDKAKMSAK- 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I S  +     + +   LVVE+YSR
Sbjct: 176 --IISKCEREWVALEINELLVVEYYSR 200


>gi|189184338|ref|YP_001938123.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Ikeda]
 gi|226699098|sp|B3CU42|RS4_ORITI RecName: Full=30S ribosomal protein S4
 gi|189181109|dbj|BAG40889.1| 30S ribosomal protein S4 [Orientia tsutsugamushi str. Ikeda]
          Length = 207

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 93/206 (45%), Positives = 134/206 (65%), Gaps = 1/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAKQKMK 59
           M+K   SK+K+ RR+G ++WG  K  +N ++Y PG  G          +   L AKQ++K
Sbjct: 1   MTKVIKSKYKVSRRLGTSVWGHEKDAINNKNYKPGQQGNSSSVSKPSDYSKHLVAKQRLK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +YG I EK+FR+ FK A +  G+T+ NL+  LE RLD +VYR    PTIFAARQ V+H+
Sbjct: 61  SHYGRIPEKQFRNTFKIARKKSGNTAENLVGLLERRLDAVVYRLNIAPTIFAARQLVSHK 120

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ +NI SYR K GD IE+ +++KQ+  V+ A     R +PEY++ + +  +  F
Sbjct: 121 HIKVNGKKINIASYRVKAGDSIELSEQAKQIPIVIGAISKKARRIPEYLAFDDEKFIGNF 180

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205
           +R+PSS+ +VPYP   Q NLVVEFYS
Sbjct: 181 IRMPSSISEVPYPFDPQINLVVEFYS 206


>gi|312199993|ref|YP_004020054.1| ribosomal protein S4 [Frankia sp. EuI1c]
 gi|311231329|gb|ADP84184.1| ribosomal protein S4 [Frankia sp. EuI1c]
          Length = 208

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 112/213 (52%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K  RR    L+ +      PK P+  R Y PG HG+ R     Y  LQ R 
Sbjct: 1   MARYVGPDCKRCRREKTKLFLKGSKCESPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  + EA+R  G T   L+  LESRLD +VYRA F P+  AARQ
Sbjct: 60  KQKCARIYGVL-EKQFRGYYDEANRRSGKTGDELLKILESRLDNVVYRAGFAPSRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H HV VNG  V+I SYR  + D++E+  KS++L   + A + A +R VP ++ V   
Sbjct: 119 AVRHGHVQVNGGKVDIPSYRVSDNDIVEIAPKSRELTPFIVARETAGQRTVPAWLEVISS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +P+          +Q  L+VE YS+
Sbjct: 179 QMRILVHSLPARGA---IDTQVQEQLIVELYSK 208


>gi|159039806|ref|YP_001539059.1| RNA-binding S4 domain-containing protein [Salinispora arenicola
           CNS-205]
 gi|157918641|gb|ABW00069.1| RNA-binding S4 domain protein [Salinispora arenicola CNS-205]
          Length = 208

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR    L+ +      PK P  +R + PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGADCRRCRREKMKLFLKGSKCDGPKCPFESRPFPPGQHGRGRTKETEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR  ++EA   +  T   L+  LESRLD +VYRA +  +   ARQ
Sbjct: 60  KQKARRVYGVL-EKQFRGYYEEAVAKQAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H  VNGR V+I SYR KE D++EV+ KSK+L   L A ++   + VP ++     
Sbjct: 119 LVKHGHFTVNGRKVDIPSYRVKEHDIVEVRGKSKELTPFLVAQAESGSKSVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +PS          +Q  L+VE YS+
Sbjct: 179 QMKVLVHSLPSRQ---VIDTQVQEQLIVELYSK 208


>gi|116629861|ref|YP_815033.1| 30S ribosomal protein S4 [Lactobacillus gasseri ATCC 33323]
 gi|116095443|gb|ABJ60595.1| SSU ribosomal protein S4P [Lactobacillus gasseri ATCC 33323]
          Length = 224

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   ++K S +G QL+ KQK++ 
Sbjct: 22  MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 80

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++F+++F  A + R      N ++ LE RLD IVYR     T   ARQ VNH 
Sbjct: 81  MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 139

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  K G  I ++ KSK L  V +A   A    P ++S +   M  T 
Sbjct: 140 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALD-AVVSRPPFVSFDDSKMTGTL 198

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   L+VE+Y++
Sbjct: 199 VRLPERDEMEP---EVDEALIVEWYNK 222


>gi|149071984|ref|YP_001293516.1| ribosomal protein S4 [Rhodomonas salina]
 gi|172048713|sp|A6MVT7|RR4_RHDSA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134302935|gb|ABO70739.1| ribosomal protein S4 [Rhodomonas salina]
          Length = 202

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   +  +I RR+GE      K+    R+  PG HG + + KPS + ++L  KQK++ 
Sbjct: 1   MSRYRGAVVRIIRRLGELPGLTRKTT--RRNSRPGQHGDQPR-KPSEYAIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     K+A R +G T   L+  LE RLD IV+R    PTI AARQ VNH H
Sbjct: 58  NYG-LTEKQLLRYVKDAKRIKGSTGEALLQLLEMRLDNIVFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VN + V+I SY+C+  DVI V+  ++    V          ++P ++ ++ + +V   
Sbjct: 117 ICVNAKRVSIPSYQCQTTDVISVRNNARSKQLVENYLSFPGLANIPSHLEIDKEKLVGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   L+VE+YSR
Sbjct: 177 NGIIERD---WVALQLNELLIVEYYSR 200


>gi|34558005|ref|NP_907820.1| 30S ribosomal protein S4 [Wolinella succinogenes DSM 1740]
 gi|41017817|sp|Q7M8F6|RS4_WOLSU RecName: Full=30S ribosomal protein S4
 gi|34483723|emb|CAE10720.1| 30S RIBOSOMAL PROTEIN S4 [Wolinella succinogenes]
          Length = 208

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      KI+RR G +L  +       KS +  R Y PG HGQRR     Y GLQLR 
Sbjct: 1   MARYRGPVEKIERRFGVSLNLKGERRLAGKSSLEKRPYAPGQHGQRRSKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF+EA+R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-ISEKQFRSIFQEANRLEGNTGELLIKLLERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V+H HVLV+G+ VNI SY    G  +E+++KSK    V  + +L  +  +  ++ V+  
Sbjct: 119 MVSHGHVLVDGKRVNIPSYMVLPGQKVEIREKSKNNPQVQRSIELTKQTGIAPWVDVDQA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   F R+P   + V   + ++  L+VE YS+
Sbjct: 179 KVFGIFTRLPEREEVV---IPVEERLIVELYSK 208


>gi|159902949|ref|YP_001550293.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9211]
 gi|226699105|sp|A9BE29|RS4_PROM4 RecName: Full=30S ribosomal protein S4
 gi|159888125|gb|ABX08339.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9211]
          Length = 202

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RS  PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE+RLD + +R  F PTI  +RQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARSLEGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+ ++I SY+CK GDVI +++K           +     +VP ++      M A  
Sbjct: 117 VTVNGKVLDIASYQCKPGDVISIREKKGSKKLAEGNLEFPGLANVPPHLEFEKSKMSAKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +     + +   LVVE+YSR
Sbjct: 177 T---GKCEREWVAIEINELLVVEYYSR 200


>gi|307297368|ref|ZP_07577174.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916628|gb|EFN47010.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 208

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +      P+     R   PG HG   +    Y G+QLR+
Sbjct: 1   MARYTGPVCKLCRREGFKLYLKGERCFSPRCSQVKRPVAPGQHGASTRKLTQY-GMQLRS 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ +K+ YG + E++FR  F+ A +   +T   L+  LESRLD IV+R  F  +   ARQ
Sbjct: 60  KQVVKRIYGVL-ERQFRRYFEAALKKNEETGTALMKILESRLDNIVFRMGFASSRRQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            VNH HVLVNGR VN  S+  + GD++E+K+KS+ +  + EA++ A ER    ++ V+++
Sbjct: 119 LVNHGHVLVNGRRVNKPSFNLRVGDIVEIKEKSRSVLPIKEAAEAAKERTAYPWVEVDYE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T++R P   ++V  PV +Q   ++E YS+
Sbjct: 179 TFRGTYLRYPV-TEEVEIPVDLQS--IIELYSK 208


>gi|256380568|ref|YP_003104228.1| 30S ribosomal protein S4 [Actinosynnema mirum DSM 43827]
 gi|255924871|gb|ACU40382.1| ribosomal protein S4 [Actinosynnema mirum DSM 43827]
          Length = 201

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +I RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRISRRLKVDLIGGDQ-AFERRPYPPGQHGRGRIKESEYL-LQLQEKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+F   +KEA R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-ILEKQFVRYYKEAVRRTGKTGENLLQILESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
            LVNG  VNI SY+  + D+I+VK KS  L     A +   +R VP ++ V   N+    
Sbjct: 118 FLVNGHKVNIPSYQVSKFDIIDVKPKSLPLLPFEAARASFGDRPVPAWLQVVPSNLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +       +   L+VE YS+
Sbjct: 178 HQLPERAQ---IDTPVTEQLIVELYSK 201


>gi|94676532|ref|YP_588800.1| ribosomal protein S4 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|152060936|sp|Q1LTB4|RS4_BAUCH RecName: Full=30S ribosomal protein S4
 gi|94219682|gb|ABF13841.1| ribosomal protein S4 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 206

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR   +L+ +     ++++      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKMSRRENIDLFLKSGVRAIDSKCKIEQPPGQHGA-RKPRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR+ ++EA R +G+T  +L+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVRRIYG-ILERQFRNYYQEAARLKGNTGESLLQLLESRLDNVVYRMGFGATRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VN   VNI SY+    D I ++ K+K+ + +  + +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNNHIVNIASYQVAINDKISIRDKAKKQSRIRASLELAEQREKPTWLEVDIVKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F +IP     +     +  +++VE YS+
Sbjct: 179 EGIFKKIPER---IHLSAHINEHMIVELYSK 206


>gi|220906440|ref|YP_002481751.1| 30S ribosomal protein S4 [Cyanothece sp. PCC 7425]
 gi|254764583|sp|B8HXV1|RS4_CYAP4 RecName: Full=30S ribosomal protein S4
 gi|219863051|gb|ACL43390.1| ribosomal protein S4 [Cyanothece sp. PCC 7425]
          Length = 204

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + ++ RR+G+      K+  + R+Y PG HGQ RK +  Y  ++L  KQK++ 
Sbjct: 1   MARYRGPRLRVIRRLGDLPGLTRKAVPSRRAYPPGQHGQARKKRSEY-AMRLEEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++     + A R  G T   L+  LE RLD I++R    PTI AARQ VNH H
Sbjct: 60  NYG-LTERQLVRYVRRARRVSGSTGLALLQLLEMRLDNIIFRLGMAPTIPAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR V+I SY+C+ G+ I ++ K        E  +     ++P ++ ++ + ++A  
Sbjct: 119 VTVNGRVVSIPSYQCRPGNEIGIRNKENSRRLAEENLKFPGLANLPTHLELDKNKLMAKV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 179 NSVVER---EWVALQVNELLVVEYYSR 202


>gi|67924299|ref|ZP_00517734.1| Ribosomal protein S4, bacterial and organelle form [Crocosphaera
           watsonii WH 8501]
 gi|67853848|gb|EAM49172.1| Ribosomal protein S4, bacterial and organelle form [Crocosphaera
           watsonii WH 8501]
          Length = 202

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+P   R+Y PG HGQ R+ +  Y  ++L  KQK+  
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLSRKTP--RRAYPPGQHGQGRRKRSEY-AIRLEEKQKLLY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     K+A R+ G T   L+  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VTEKQLVRYMKKARRATGSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V+VNGR VNI SY+C+ GDVI V+ K      V    Q     +VPE++  + + ++   
Sbjct: 117 VMVNGRIVNIASYQCRPGDVISVRNKDHSRRLVEANMQYPGLANVPEHLEFDKNTLIGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   LVVE+YSR
Sbjct: 177 NDVIKR---EWVALQINELLVVEYYSR 200


>gi|157363469|ref|YP_001470236.1| 30S ribosomal protein S4 [Thermotoga lettingae TMO]
 gi|172045985|sp|A8F4T8|RS4_THELT RecName: Full=30S ribosomal protein S4
 gi|157314073|gb|ABV33172.1| RNA-binding S4 domain protein [Thermotoga lettingae TMO]
          Length = 209

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +           + R Y PG HG++R  K S +G QLRA
Sbjct: 1   MARYTGPICRLCRREGMKLYLKGERCFTEHCAFDKRPYAPGDHGRQR-GKLSQYGTQLRA 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ M+  YG I E++F   F++A    GDT  NL+  +ESR+D IVYR  F  +   ARQ
Sbjct: 60  KQVMRVIYG-IPERQFEHYFEKALGMSGDTRENLVRLVESRVDNIVYRLGFAISRRQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNG  ++I SY+ + GD++EV++KS+ LA++  A + ++ R    ++ V+ D
Sbjct: 119 LVTHGHFSVNGVKIDIPSYKLRPGDIVEVREKSRSLAAIKHAVESSKDRTQVPWVEVDFD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   TF+R+P+  +    PV +    +VEFYSR
Sbjct: 179 SYRGTFLRLPNLEEVTDLPVDV--QAIVEFYSR 209


>gi|291277243|ref|YP_003517015.1| 30S ribosomal protein S4 [Helicobacter mustelae 12198]
 gi|290964437|emb|CBG40287.1| 30S ribosomal protein S4 [Helicobacter mustelae 12198]
          Length = 208

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R YGPG HGQ+R     Y GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYGPGQHGQKRGKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR+IF EA+R  G+T  NL+  +E RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKVMYG-VSEKQFRAIFTEANRLDGNTGENLVRLIERRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V+H H+LV+G+ VNI S+  K+G  IEV +KSK    +  A +L ++  +  ++ V+ D
Sbjct: 119 LVSHGHILVDGKRVNIPSFFVKQGQKIEVIEKSKNNPQITRAIELTSQTGISPWVDVDKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++  L+VE YS+
Sbjct: 179 KRFGIFTRYPEREEVV---IPIEERLIVELYSK 208


>gi|283769109|ref|ZP_06342014.1| ribosomal protein S4 [Bulleidia extructa W1219]
 gi|283104295|gb|EFC05673.1| ribosomal protein S4 [Bulleidia extructa W1219]
          Length = 200

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  ++       +  R+Y PG HG  ++ K S +G QLR KQ+++ 
Sbjct: 1   MARYTGPVWKKARRLSFSI-LETGEELKKRTYAPGQHGPTKRIKLSGYGTQLREKQRIRN 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++F ++F +A +  G    N +  LESRLD IVYR  F  T  AARQ VNH H
Sbjct: 60  MYG-LNERQFHNLFVKASKMDGMAGVNFLVLLESRLDNIVYRMGFARTRKAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ VNI S   K G  I +K+KS  LA V E+ + ++     ++ V+ DN    F+
Sbjct: 119 ILVDGKKVNIPSALIKPGQEISLKEKSLNLAIVKESLE-SQISTAAFVEVDKDNKKGKFI 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   LVVE+Y+R
Sbjct: 178 RLPDRNE---LNQEINEALVVEYYNR 200


>gi|42518876|ref|NP_964806.1| 30S ribosomal protein S4 [Lactobacillus johnsonii NCC 533]
 gi|227889735|ref|ZP_04007540.1| 30S ribosomal protein S4 [Lactobacillus johnsonii ATCC 33200]
 gi|238853696|ref|ZP_04644064.1| ribosomal protein S4 [Lactobacillus gasseri 202-4]
 gi|268319727|ref|YP_003293383.1| ribosomal protein S4 [Lactobacillus johnsonii FI9785]
 gi|282851624|ref|ZP_06260989.1| ribosomal protein S4 [Lactobacillus gasseri 224-1]
 gi|311110502|ref|ZP_07711899.1| ribosomal protein S4 [Lactobacillus gasseri MV-22]
 gi|61215653|sp|Q74K05|RS4_LACJO RecName: Full=30S ribosomal protein S4
 gi|152060955|sp|Q042M7|RS4_LACGA RecName: Full=30S ribosomal protein S4
 gi|41583162|gb|AAS08772.1| 30S ribosomal protein S4 [Lactobacillus johnsonii NCC 533]
 gi|227849599|gb|EEJ59685.1| 30S ribosomal protein S4 [Lactobacillus johnsonii ATCC 33200]
 gi|238833734|gb|EEQ26003.1| ribosomal protein S4 [Lactobacillus gasseri 202-4]
 gi|262398102|emb|CAX67116.1| ribosomal protein S4 [Lactobacillus johnsonii FI9785]
 gi|282557592|gb|EFB63189.1| ribosomal protein S4 [Lactobacillus gasseri 224-1]
 gi|311065656|gb|EFQ45996.1| ribosomal protein S4 [Lactobacillus gasseri MV-22]
          Length = 203

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   ++K S +G QL+ KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++F+++F  A + R      N ++ LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  K G  I ++ KSK L  V +A   A    P ++S +   M  T 
Sbjct: 119 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALD-AVVSRPPFVSFDDSKMTGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   L+VE+Y++
Sbjct: 178 VRLPERDEMEP---EVDEALIVEWYNK 201


>gi|161349358|ref|ZP_02096742.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177']
 gi|164601574|gb|EDQ95165.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177']
          Length = 206

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K ++ RR   +L  +     ++++      PG+H Q R+ + + +G+QLR KQ
Sbjct: 1   MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQ-RRGRTTDYGVQLRMKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
            +K+YY  + EK+F + +K+ADR +G T  NL+  LESRLD +VYR  F  T   ARQ +
Sbjct: 60  MIKRYYDVL-EKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFSATRAEARQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
           +H+ +LVNG  VNI SY+ K GD+IEV+ ++K    +  A +LA++  P  +I V+   M
Sbjct: 119 SHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLQIKGALELAQQRAPISWIEVDTKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P   +    P   + NLVVE YS+
Sbjct: 179 TGTFKEQPDVAE---LPAEFKVNLVVELYSK 206


>gi|315453711|ref|YP_004073981.1| 30S ribosomal protein S4 [Helicobacter felis ATCC 49179]
 gi|315132763|emb|CBY83391.1| 30S ribosomal protein S4 [Helicobacter felis ATCC 49179]
          Length = 208

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K++RR G +L+ +       KS ++ R+YGPG HGQ R+ K S +GLQLR 
Sbjct: 1   MARYRGAVEKLERRFGISLFLKGERRLSGKSALDKRAYGPGQHGQ-RRGKISDYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF+EA+R  G+T  NL+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKAMYG-ISEKQFRSIFREANRMEGNTGENLVRLLERRLDNVVYRMGFATTRSFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            V H H+LV+G+ ++I S   K G  IE+K+KSK+   +  A +L  +  +  +I V+ D
Sbjct: 119 LVTHGHILVDGKRMDIPSAFIKSGQKIEIKEKSKENPQITRAVELTNQVGIVPWIDVDKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   +     + ++  L+VE YS+
Sbjct: 179 KKFGIFTRYPERDE---VSLPLEERLIVELYSK 208


>gi|295398656|ref|ZP_06808680.1| 30S ribosomal protein S4 [Aerococcus viridans ATCC 11563]
 gi|294973091|gb|EFG48894.1| 30S ribosomal protein S4 [Aerococcus viridans ATCC 11563]
          Length = 203

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  K+ RR+G ++ G  K  +  R Y PG HG  R++K S +GLQL+ KQK++ 
Sbjct: 1   MSRFTGSNWKVSRRLGISISGTGKE-IARRPYAPGEHGNGRRAKLSEYGLQLQEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++EK+F ++F +A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  IYG-MNEKQFANLFVQAGKIKEGKHGVNFMILLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I S+R + G VI V++KSK +  + EA +     VP Y+  + + +  + 
Sbjct: 119 HITVDGKRVDIPSFRVQPGQVISVREKSKDVKVIKEAVEGLYGHVP-YVQFDAEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +R+P   +       +  +LVVE+Y++
Sbjct: 178 IRLPQRDE---MNQEIDESLVVEYYNK 201


>gi|284033972|ref|YP_003383903.1| 30S ribosomal protein S4 [Kribbella flavida DSM 17836]
 gi|283813265|gb|ADB35104.1| ribosomal protein S4 [Kribbella flavida DSM 17836]
          Length = 202

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G  K     R Y PG+HG+ R  +  Y  LQLR KQK + 
Sbjct: 1   MARYTGPMTKKSRRLGVDLVGGDK-AFERRPYPPGMHGRGRPKESEYL-LQLREKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   +KEA R  G T  NL+  LESRLD +VYRA    T   ARQ V H H
Sbjct: 59  AYGVL-EKQFSLYYKEASRRPGKTGDNLLIILESRLDNVVYRAGLARTRRQARQLVVHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
             VNG  VNI SYR    DVI+V+ KS ++   + A +  +ER VP ++    + +    
Sbjct: 118 FTVNGIKVNIPSYRVAAHDVIDVRPKSAEMTPFIIARETHSERVVPAWLEALPERLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  +       +  +L+VE YS+
Sbjct: 178 HQLPTRAQ---IDTQVAEHLIVELYSK 201


>gi|206895668|ref|YP_002247308.1| ribosomal protein S4 [Coprothermobacter proteolyticus DSM 5265]
 gi|206738285|gb|ACI17363.1| ribosomal protein S4 [Coprothermobacter proteolyticus DSM 5265]
          Length = 210

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 13/213 (6%)

Query: 3   KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAK 55
           K      +I RR G  L+ +      PK P+  R++ PG HG  R+ K    +GL+L+ K
Sbjct: 2   KYTGPSCRICRRSGVKLFLKGEKCLSPKCPMERRAFPPGQHGPTRRGKRDTEYGLRLKEK 61

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGD-TSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           QK++  Y  I+E + R  F  A   +G  T   L+  LE RLD +V R  F  +I  AR 
Sbjct: 62  QKLRHSY-MITETQLRRYFSTAMSQKGVATGTALLQLLERRLDAVVQRMGFASSIKMARN 120

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
           +V H HV+VNG+ V+I SY  K GD I + +  K    V ++  + E R   E+++V+ +
Sbjct: 121 WVRHGHVMVNGKRVDIPSYLVKPGDRITLDKDLKDNPDVQKSIAMNEGRPNLEWLNVDVE 180

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+  T++R+PS  +    PV +   L+VE+YSR
Sbjct: 181 NLEGTYLRVPSREE---IPVAVNEQLIVEYYSR 210


>gi|57504894|ref|ZP_00370869.1| ribosomal protein S4 [Campylobacter coli RM2228]
 gi|305432399|ref|ZP_07401561.1| 30S ribosomal protein S4 [Campylobacter coli JV20]
 gi|57019322|gb|EAL56024.1| ribosomal protein S4 [Campylobacter coli RM2228]
 gi|304444438|gb|EFM37089.1| 30S ribosomal protein S4 [Campylobacter coli JV20]
          Length = 208

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R Y PG HG  RK K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARRDGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I S+R + G  IEV +KSK    +  A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHILVNGKRVDIPSFRVEAGAKIEVIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + +   + ++   +VE YS+
Sbjct: 179 KRFGIFTRKPEREEVI---IPVEERFIVELYSK 208


>gi|300782638|ref|YP_003762929.1| 30S ribosomal protein S4 [Amycolatopsis mediterranei U32]
 gi|299792152|gb|ADJ42527.1| small subunit ribosomal protein S4 [Amycolatopsis mediterranei U32]
          Length = 201

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +I RR+  +L G  +     R Y PG HG+ R  +  Y  LQ + KQK + 
Sbjct: 1   MARYTGPATRISRRLKVDLIGGDQ-AFERRPYPPGQHGRGRIKESEYL-LQSQEKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++F   +KEA R  G T  NL+  LESRLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFVRYYKEAVRRPGKTGENLLQILESRLDNVIYRAGIARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG  VN+ SY+  + D+I+V+ KS  +   + A +   +R +P ++ V   N+    
Sbjct: 118 FLVNGVKVNVPSYQVTKWDIIDVRPKSFSMLPFVVAKESFGDRPIPAWLQVVQSNLRVLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPVQEQLIVELYSK 201


>gi|300361435|ref|ZP_07057612.1| 30S ribosomal protein S4 [Lactobacillus gasseri JV-V03]
 gi|300354054|gb|EFJ69925.1| 30S ribosomal protein S4 [Lactobacillus gasseri JV-V03]
          Length = 208

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   ++K S +G QL+ KQK++ 
Sbjct: 6   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 64

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++F+++F  A + R      N ++ LE RLD IVYR     T   ARQ VNH 
Sbjct: 65  MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 123

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  K G  I ++ KSK L  V +A   A    P ++S +   M  T 
Sbjct: 124 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALD-AVVSRPPFVSFDDSKMTGTL 182

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   L+VE+Y++
Sbjct: 183 VRLPGRDEMEP---EVDEALIVEWYNK 206


>gi|134103232|ref|YP_001108893.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338]
 gi|291007976|ref|ZP_06565949.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338]
 gi|152112258|sp|A4FPJ3|RS4_SACEN RecName: Full=30S ribosomal protein S4
 gi|133915855|emb|CAM05968.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338]
          Length = 201

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPATRKSRRLKVDLVGGDQ-AFERRPYPPGQHGRARIKETEYL-LQLQEKQKAKF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FRS ++EA+R  G T  NL+  LE RLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFRSYYEEANRRPGKTGDNLLQVLECRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKS-KQLASVLEASQLAERDVPEYISVNHDNMVATF 179
             VNG+ VNI SY+  + D+I+VKQKS      ++    + ER VP ++ V   N+    
Sbjct: 118 FTVNGKKVNIPSYQVSKWDIIDVKQKSLGTTPFIIAKETIGERPVPAWLQVVPSNLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + P   +       +   L+VE YS+
Sbjct: 178 HQRPERAQ---IDTPVTEQLIVELYSK 201


>gi|68536849|ref|YP_251554.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411]
 gi|260579207|ref|ZP_05847097.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734]
 gi|90101685|sp|Q4JTC1|RS4_CORJK RecName: Full=30S ribosomal protein S4
 gi|68264448|emb|CAI37936.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411]
 gi|258602693|gb|EEW15980.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734]
          Length = 201

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G   S    R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPVTRKSRRLRVDLVGGDNS-FERRPYPPGQAGRARIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-EKQFRRYYAEANRRPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ VN+ S++  + D+I+V++KS+ +    EA + L +  VP ++ V    +    
Sbjct: 118 FTVNGKKVNVPSFKVSQYDIIDVREKSRSMLWFEEAQEALVDTIVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVELYSK 201


>gi|325282667|ref|YP_004255208.1| ribosomal protein S4 [Deinococcus proteolyticus MRP]
 gi|324314476|gb|ADY25591.1| ribosomal protein S4 [Deinococcus proteolyticus MRP]
          Length = 206

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           M +   S  K  RR G NL    K    ++ R Y PG HGQRR + +PS + ++LR KQK
Sbjct: 1   MGRFSGSIVKQSRREGINLAETEKVQKYLDRRPYAPGQHGQRRGRGRPSDYSVRLREKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           + + YG ++EK+FR++F+EA R  G      +  LE RLD +V+R  F  T   ARQFV 
Sbjct: 61  LSRLYG-MNEKQFRNLFEEATRQPGVLGTVFLQLLERRLDNVVFRMGFASTRRQARQFVG 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE-YISVNHDNMV 176
           H H+LVNG+ V+I SYR K GD I V +KS+ +  V E  +  +R  P  ++ VN +   
Sbjct: 120 HGHILVNGKKVDIASYRVKIGDEITVAEKSRSMGFVQENMEAMKRRRPSPWLEVNAETFT 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            TF R+P+        + +  N ++E+YSR
Sbjct: 180 GTFNRLPAR---EDLALPINENFIIEYYSR 206


>gi|71277977|ref|YP_267375.1| 30S ribosomal protein S4 [Colwellia psychrerythraea 34H]
 gi|90101683|sp|Q488Y9|RS4_COLP3 RecName: Full=30S ribosomal protein S4
 gi|71143717|gb|AAZ24190.1| ribosomal protein S4 [Colwellia psychrerythraea 34H]
          Length = 206

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  R+ + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIETIPGQHGA-RRGRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ +G + EK+F + +KEA R +G+T  NL+  LE+RLD +VYR  +  T   ARQ V
Sbjct: 60  KVRRIFGVL-EKQFSNYYKEAARQKGNTGENLLQLLETRLDNVVYRMGYASTRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ ++VNG  VNI S+  K  D + V++KSK  A ++ A +LA +R+ P ++ V+   +
Sbjct: 119 SHKAIVVNGVVVNIPSFTVKAEDTVSVREKSKTQARIIAALELADQREKPLWVEVDTKKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R+P           +   L+VE YS+
Sbjct: 179 EGVFKRVPDRAD---LSAEINEQLIVELYSK 206


>gi|222823138|ref|YP_002574711.1| 30S ribosomal protein S4 [Campylobacter lari RM2100]
 gi|254764576|sp|B9KEH5|RS4_CAMLR RecName: Full=30S ribosomal protein S4
 gi|222538359|gb|ACM63460.1| 30S ribosomal protein S4 [Campylobacter lari RM2100]
          Length = 208

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR+G +L  +       KS ++ R Y PG HGQ RK+K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRLGVSLAMKGERRLAGKSALDKRPYAPGQHGQ-RKAKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARKDGNTGALLIQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I SYR + G  IEV +KSK    +  A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHILVNGKRVDIPSYRVEAGQKIEVIEKSKNNPQISRAIELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + +   + ++   +VE YS+
Sbjct: 179 KRFGIFTRKPEREEVI---IPVEERYIVELYSK 208


>gi|212218098|ref|YP_002304885.1| 30S ribosomal protein S4 [Coxiella burnetii CbuK_Q154]
 gi|226697829|sp|B6J5F6|RS4_COXB1 RecName: Full=30S ribosomal protein S4
 gi|212012360|gb|ACJ19740.1| SSU ribosomal protein S4P [Coxiella burnetii CbuK_Q154]
          Length = 206

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K ++ RR   +L  +     ++++      PG+H Q R+ + + +G+QLR KQ
Sbjct: 1   MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQ-RRGRTTDYGVQLRMKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
            +K+YY  + EK+F + +K+ADR +G T  NL+  LESRLD +VYR  F  T   ARQ +
Sbjct: 60  MIKRYYDVL-EKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFSATRAEARQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHDNM 175
           +H+ +LVNG  VNI SY+ K GD+IEV+ ++K    +  A +LA++  P  +I V+   M
Sbjct: 119 SHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLRIKGALELAQQRAPISWIEVDTKKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             TF   P   +    P   + NLVVE YS+
Sbjct: 179 TGTFKEQPDVAE---LPAEFKVNLVVELYSK 206


>gi|297159624|gb|ADI09336.1| 30S ribosomal protein S4 [Streptomyces bingchenggensis BCW-1]
          Length = 208

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 108/213 (50%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR  + L+ +       K P+  R Y PG HG+ R     Y  LQLR 
Sbjct: 1   MARYTGADCKRCRREKQKLFLKGSKCESAKCPIEIRPYPPGEHGRGRTKDSEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  + EA++  G T  NL+  LESRLD +VYRA F  +   ARQ
Sbjct: 60  KQKATRIYGVL-EKQFRGYYAEANKKTGKTGENLLRILESRLDNVVYRAGFAKSRDHARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H+ VNGR  +I S R    D+IEV+ KS+ L     A ++  ER VP ++     
Sbjct: 119 LVRHGHINVNGRKTDIPSARVAVNDIIEVRPKSRTLTPFQVAQAEAGERTVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P           +Q  L+VE YS+
Sbjct: 179 QLRILVHSLPERQ---VIDTQVQEQLIVELYSK 208


>gi|307328057|ref|ZP_07607238.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113]
 gi|306886362|gb|EFN17367.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113]
          Length = 208

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR  + L+ +       K P+  R Y PG HG+ R     Y  LQLR 
Sbjct: 1   MARYTGADCKRCRREKQKLFLKGSKCESAKCPIEIRPYPPGEHGRGRTKDSEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  + EA++  G T  NL+  LE+RLD +VYRA F  +   ARQ
Sbjct: 60  KQKATRIYGVL-EKQFRGYYAEANKKSGKTGENLLRILETRLDNVVYRAGFAKSRDHARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H+ VNGR  +I S R    D+IEV+ KS+ L     A ++  ER VP ++     
Sbjct: 119 LVRHGHITVNGRKTDIPSARVTVNDIIEVRTKSRTLTPFQVAQAEAGERTVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P           +Q  L+VE YS+
Sbjct: 179 QLRILVHSMPERQ---VIDTQVQEQLIVELYSK 208


>gi|269836359|ref|YP_003318587.1| 30S ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745]
 gi|269785622|gb|ACZ37765.1| ribosomal protein S4 [Sphaerobacter thermophilus DSM 20745]
          Length = 203

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTR-SYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M++    KHKI RR G NL G     +  R    PG H   R  + + +G QLR KQK+K
Sbjct: 1   MARYTGPKHKISRREGINLTGTRSRSLERRLKTPPGAHAHARPRRMTEYGRQLREKQKLK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
           +++G + EK+FR  F++A RS+  T   L+  LESRLD +VYR  F PT   ARQ VNH 
Sbjct: 61  RHFGML-EKQFRRTFQDARRSKEPTGTALVKLLESRLDNVVYRLGFTPTRPMARQLVNHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HVLVNGR V+I SYR   GD I + +K+ ++  V EA Q A   +P ++S      V   
Sbjct: 120 HVLVNGRRVDIPSYRVSPGDTIALTEKAAEIPDVQEALQDAGHQIPSWLSREGTQPVGRV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  P+  +++  PV ++  L++ FY+R
Sbjct: 180 ISEPN-PEELDIPVDIE--LIIAFYAR 203


>gi|57238607|ref|YP_179738.1| 30S ribosomal protein S4 [Campylobacter jejuni RM1221]
 gi|148925738|ref|ZP_01809426.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205355608|ref|ZP_03222378.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|81675536|sp|Q5HSJ7|RS4_CAMJR RecName: Full=30S ribosomal protein S4
 gi|57167411|gb|AAW36190.1| ribosomal protein S4 [Campylobacter jejuni RM1221]
 gi|145845748|gb|EDK22839.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205346385|gb|EDZ33018.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|315059045|gb|ADT73374.1| SSU ribosomal protein S4p [Campylobacter jejuni subsp. jejuni S3]
          Length = 208

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R Y PG HG  RK K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNG+ V+I S+R + G  IE+ +KSK    +  A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHILVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208


>gi|108798084|ref|YP_638281.1| 30S ribosomal protein S4 [Mycobacterium sp. MCS]
 gi|119867180|ref|YP_937132.1| 30S ribosomal protein S4 [Mycobacterium sp. KMS]
 gi|126433744|ref|YP_001069435.1| 30S ribosomal protein S4 [Mycobacterium sp. JLS]
 gi|123070558|sp|Q1BD09|RS4_MYCSS RecName: Full=30S ribosomal protein S4
 gi|152112233|sp|A3PVL7|RS4_MYCSJ RecName: Full=30S ribosomal protein S4
 gi|152112234|sp|A1UBY4|RS4_MYCSK RecName: Full=30S ribosomal protein S4
 gi|108768503|gb|ABG07225.1| SSU ribosomal protein S4P [Mycobacterium sp. MCS]
 gi|119693269|gb|ABL90342.1| SSU ribosomal protein S4P [Mycobacterium sp. KMS]
 gi|126233544|gb|ABN96944.1| SSU ribosomal protein S4P [Mycobacterium sp. JLS]
          Length = 201

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G  +S    R Y PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLGVDLVGGDQS-FEKRPYPPGQHGRARIKESEYR-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-EKQFRRYYDEANRQPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  V+I SYR  + D+I+V++KS      + A + A +R +P ++ V  +      
Sbjct: 118 FTVNGVKVDIPSYRVSQYDIIDVREKSLNTDPFVIARETAGDRPIPSWLQVVGERQRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVELYSK 201


>gi|301057497|ref|ZP_07198593.1| ribosomal protein S4 [delta proteobacterium NaphS2]
 gi|300448425|gb|EFK12094.1| ribosomal protein S4 [delta proteobacterium NaphS2]
          Length = 209

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR    L+ +       K     R+Y PG HGQRR  K S +  QLR 
Sbjct: 1   MARYRDSSCRLCRRENLKLFLKGDRCYGDKCAFERRAYAPGQHGQRRGGKLSDYSQQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG I EK+F+  +  A+R +G T  NL+  LESRLD +VY+  F  +   ARQ
Sbjct: 61  KQKVKRIYG-ILEKQFKGYYYRAERQKGITGTNLLLLLESRLDNVVYKMGFAASRTQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            + H H LVN + VNI SY+ K GDV+E K+KS++++ ++EA +    R VP ++ V  +
Sbjct: 120 LIRHNHFLVNQKKVNIPSYQVKVGDVVEAKEKSREVSQIIEAMETVVRRGVPGWMEVEKE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +P+  +D+  P  +Q  L+VE YS+
Sbjct: 180 AFKGMMKGLPNR-EDLTMP--IQEQLIVELYSK 209


>gi|255324778|ref|ZP_05365892.1| ribosomal protein S4 [Corynebacterium tuberculostearicum SK141]
 gi|311740031|ref|ZP_07713865.1| 30S ribosomal protein S4 [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255298253|gb|EET77556.1| ribosomal protein S4 [Corynebacterium tuberculostearicum SK141]
 gi|311305104|gb|EFQ81173.1| 30S ribosomal protein S4 [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 201

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      ++ RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFRRYYAEANRLPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+++N+ SY+  + D+I+V+ +SK++    +A   L + +VP ++ V  D +    
Sbjct: 118 FTVNGKNINVPSYKVTQYDIIDVRDRSKKMEWFEDAQDALIDANVPAWLQVVPDTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVELYSK 201


>gi|329667577|gb|AEB93525.1| 30S ribosomal protein S4 [Lactobacillus johnsonii DPC 6026]
          Length = 203

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   ++K S +G QL+ KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E++F+++F  A + R      N ++ LE RLD IVYR     T   ARQ VNH 
Sbjct: 60  MFG-LNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I SY  K G  I ++ KSK L  V +A   A    P ++S +   M  T 
Sbjct: 119 HILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALN-AVVSRPPFVSFDDSKMTGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +   L+VE+Y++
Sbjct: 178 VRLPERDEMEP---EVDEALIVEWYNK 201


>gi|257454070|ref|ZP_05619344.1| ribosomal protein S4 [Enhydrobacter aerosaccus SK60]
 gi|257448548|gb|EEV23517.1| ribosomal protein S4 [Enhydrobacter aerosaccus SK60]
          Length = 213

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 17/218 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-----SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +                PG HG  R     Y   QLR K
Sbjct: 1   MARYLGPKLKLSRREGTDLQLKSGVKAYEEKTKKADRAPGQHGNPRSKTSEYSA-QLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K+ YG + E++F + +KEA R +G T  NL+  LE RLD +VYR  F  T   ARQ 
Sbjct: 60  QKVKRIYGVL-ERQFSNYYKEAARMKGATGENLLQMLERRLDNVVYRMGFGATRAEARQL 118

Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168
           V+HR +LV          VNI S + ++GDVI V +K+K+   +  A +LA +R  P ++
Sbjct: 119 VSHRAILVKKAGRDEFVRVNIPSIQLQDGDVIAVHEKAKEQLRIKNAIELAGQRGTPVWL 178

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+H  +  TF + P        P  +  +L+VE YS+
Sbjct: 179 EVDHSKLQGTFKQAPERAD---LPTEINESLIVELYSK 213


>gi|269959011|ref|YP_003328800.1| 30S ribosomal protein S4 [Anaplasma centrale str. Israel]
 gi|269848842|gb|ACZ49486.1| 30S ribosomal protein S4 [Anaplasma centrale str. Israel]
          Length = 222

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 2/198 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G NLWGR K P NTR+Y PG HG     K S FG Q  A QK K YY  +S 
Sbjct: 26  KYRASRRLGVNLWGRSKDPFNTRNYPPGQHGSMGYKKLSSFGKQFAAHQKFKCYYA-MSS 84

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++ R+ F  A   +GDT  NL+  LESRL  +VY A FVPTIF+ARQ V+H+HV VNG+ 
Sbjct: 85  RQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTIFSARQLVSHKHVTVNGKV 144

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI S+  K GDV+++++++ +L  VL A Q  ER VP+++ V+ +   A ++R+P   +
Sbjct: 145 VNIPSFSVKPGDVVQIRERASELPMVLAAIQSQERRVPDHLEVDTEQRSARYLRVPKYCE 204

Query: 188 DVPYPVIMQPNLVVEFYS 205
            VPYP  M+ NLVVEFYS
Sbjct: 205 -VPYPANMEVNLVVEFYS 221


>gi|86608572|ref|YP_477334.1| 30S ribosomal protein S4 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123502848|sp|Q2JMH0|RS4_SYNJB RecName: Full=30S ribosomal protein S4
 gi|86557114|gb|ABD02071.1| ribosomal protein S4 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 203

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 9/208 (4%)

Query: 1   MSKRESSKHKIDRRIG--ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+    + KI RR G  +      K P NT    PG+HG  RK K  Y  ++L  KQK+
Sbjct: 1   MSRYTGPRLKIIRRFGGLDLPGLTRKRPKNT--NPPGMHGAERKKKSEY-AIRLEEKQKV 57

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG +SE++     ++A RS+G T   L+  LE RLD IV+R    PTI AARQ V+H
Sbjct: 58  RFNYG-LSERQMIRYMRKARRSKGSTGLALLQMLEMRLDCIVFRLGMAPTIPAARQLVSH 116

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+ VNG+ V I SY CK GDVI VK K      V   ++     +P+Y+  + + +   
Sbjct: 117 GHIEVNGQKVTIPSYGCKVGDVITVKNKESSRKLVAAYAEYPGLFLPDYLEFDKEKLRGR 176

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +P   +       +   LVVEFYSR
Sbjct: 177 IKELPPREQ---ICAPVNELLVVEFYSR 201


>gi|144143|gb|AAC05398.1| ribosomal protein S4 [Buchnera aphidicola]
 gi|448400|prf||1917188A ribosomal protein S4
          Length = 206

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +  QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGFRSIDSKCKLEHPPGQHG-VRKPRLSDYAYQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  +K+A RS+G+T  NL+  LE RLD +VYR  F  T   +RQ +
Sbjct: 60  KVRRLYGVL-ERQFRIYYKKASRSKGNTGENLLQLLERRLDNVVYRMGFGCTRSESRQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ + VN   VNI SY+    D I V+ KSK  + +  A +L E R+   +I V+   M
Sbjct: 119 SHKSIKVNNNIVNIASYQISPNDRISVRDKSKNQSRIKAALELTEQREKLMWIEVDVTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +  +L+VE YS+
Sbjct: 179 EGIFKRFPERSD---LSAEINEHLIVELYSK 206


>gi|320335497|ref|YP_004172208.1| 30S ribosomal protein S4 [Deinococcus maricopensis DSM 21211]
 gi|319756786|gb|ADV68543.1| ribosomal protein S4 [Deinococcus maricopensis DSM 21211]
          Length = 205

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 123/209 (58%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +   S  K  RR G NL    K    ++ R Y PG HGQRRK +PS + ++LR KQK+
Sbjct: 1   MGRFRGSITKQSRREGINLAETEKVQKYLDRRPYAPGQHGQRRKGRPSDYSVRLREKQKL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
            + YG +SEK+FR++F+EA    G T    + FLE RLD +++R     T   ARQFV H
Sbjct: 61  ARLYG-VSEKQFRNLFEEAANIPGVTGTVFLQFLERRLDNVIFRLGIASTRRQARQFVAH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
            H+LVNG+ +++ SYR K GDVI V ++S+Q   +LE  + A+ R V  ++  N +    
Sbjct: 120 GHILVNGKLLDVPSYRVKIGDVITVAERSRQNGFILENMEAAKRRRVSPWLEFNTETFTG 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +FVR+P+        + +  N ++EFYSR
Sbjct: 180 SFVRLPAR---EDLALPINENFIIEFYSR 205


>gi|33519682|ref|NP_878514.1| 30S ribosomal protein S4 [Candidatus Blochmannia floridanus]
 gi|41017831|sp|Q7VQC4|RS4_BLOFL RecName: Full=30S ribosomal protein S4
 gi|33517345|emb|CAD83730.1| 30S ribosomal subunit protein S4 [Candidatus Blochmannia
           floridanus]
          Length = 207

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR   +L+ +     ++++    + PG H   RKS+ S +G+QLR KQ
Sbjct: 1   MAKYVGPKLKLSRRENTDLFLKSGIRSIDSKCQFDHAPGQH-SIRKSRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG I E +F + ++++   +G+T   L+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVKRMYG-ILENQFANYYRKSASMKGNTGEILLQLLESRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174
           +H+ ++VN   VNI SY+     VI+V +KS   + +  A ++AE  R+   +I V+   
Sbjct: 119 SHKSIIVNDCIVNIASYQVVPNTVIQVYKKSHNQSRIYAALEIAEQQRESVPWIEVDSAK 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F R P   +       +  +L+VE YS+
Sbjct: 179 LKGIFKRRPERSE---LSANINEHLIVELYSK 207


>gi|21672746|ref|NP_660813.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654271|sp|P41186|RS4_BUCAP RecName: Full=30S ribosomal protein S4
 gi|21623392|gb|AAM68024.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 206

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S + +QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGFRSIDSKCKLEHPPGQHG-VRKPRLSDYAIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR  +K+A RS+G+T  NL+  LE RLD +VYR  F  T   +RQ +
Sbjct: 60  KVRRLYGVL-ERQFRIYYKKASRSKGNTGENLLQLLERRLDNVVYRMGFGCTRSESRQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ + VN   VNI SY+    D I V+ KSK  + +  A +L E R+   +I VN   M
Sbjct: 119 SHKSIKVNNNIVNIASYQISPNDRISVRDKSKNQSRIKAALELTEQREKLMWIEVNVTKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F R P           +  +L+VE YS+
Sbjct: 179 EGIFKRFPERSD---LSAEINEHLIVELYSK 206


>gi|153004799|ref|YP_001379124.1| 30S ribosomal protein S4 [Anaeromyxobacter sp. Fw109-5]
 gi|171769305|sp|A7HBP4|RS4_ANADF RecName: Full=30S ribosomal protein S4
 gi|152028372|gb|ABS26140.1| RNA-binding S4 domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 208

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR    ++ +       K  +  R Y PG HGQ R  K S +G+QLR 
Sbjct: 1   MARYNESVCRLCRRENLKMYLKGDRCYTDKCAIERRPYPPGQHGQGR-VKFSEYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E  FR  ++ A  ++G T  NL+  LE RLD +V+R  F  T   ARQ
Sbjct: 60  KQKVKRMYG-LLEAGFRHAYQNAAAAKGKTGENLLQTLELRLDNVVFRLGFADTRNEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H  VNGR VNI SY C+ GD +E++ +S+++  + EA +  + R VP ++ ++  
Sbjct: 119 LVRHGHFKVNGRKVNIPSYLCRAGDKVELRDRSRKVVRISEALEAVDRRGVPGWLELDKG 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T    PS  +D+  P  +Q  L+VE YS+
Sbjct: 179 GFKGTVRTQPSR-EDITMP--IQEQLIVELYSK 208


>gi|227832272|ref|YP_002833979.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
 gi|262183872|ref|ZP_06043293.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
 gi|254764581|sp|C3PL37|RS4_CORA7 RecName: Full=30S ribosomal protein S4
 gi|227453288|gb|ACP32041.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
          Length = 201

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      ++ RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  + EA+R  G T  NL+  LESRLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFRRYYAEANRLPGKTGDNLVVLLESRLDNVIYRAGLANTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ +N+ S+R  + D+I+V+++S+++    EA   L + +VP ++ V  D +    
Sbjct: 118 FTVNGKKINVPSFRVTQYDIIDVRERSQKMEWFEEAQDRLVDANVPAWLQVVPDTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201


>gi|227505245|ref|ZP_03935294.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940]
 gi|227198144|gb|EEI78192.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940]
          Length = 201

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      ++ RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFRRYYAEANRRPGKTGDNLVVLLESRLDNVVYRAGLANTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ +N+ S++  + D+I+V+++S+++    +A   L + +VP ++ V  D +    
Sbjct: 118 FTVNGKKINVPSFQVSQYDIIDVRERSQKMEWFEDAQDRLVDANVPAWLQVVPDTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201


>gi|90655388|gb|ABD96229.1| 30S ribosomal protein S4 [uncultured marine type-A Synechococcus
           GOM 3M9]
          Length = 202

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V+VNGR  +I SY+CK GDVI ++++           +     ++P ++ ++   + A  
Sbjct: 117 VMVNGRVTDIASYQCKTGDVIAIRERKGSKKLAEGNLEFPGLANIPPHMELDKTKLTAKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V      +     + +   LVVE+YSR
Sbjct: 177 V---GKCEREWVALEINELLVVEYYSR 200


>gi|259046817|ref|ZP_05737218.1| 30S ribosomal protein S4 [Granulicatella adiacens ATCC 49175]
 gi|259036440|gb|EEW37695.1| 30S ribosomal protein S4 [Granulicatella adiacens ATCC 49175]
          Length = 203

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   + K S +G QL+ KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGISLSGTGKE-IARRPYAPGQHGPNSRKKLSEYGQQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++FK+A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFATLFKKAGKIKEGKHGENFMVLLEQRLDNVVYRLGLATTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VNG+ V+I S++ + GDV+ V++KS+ L  + EA + A    PE+++ + + +  + 
Sbjct: 119 HITVNGKRVDIPSFQVQVGDVVGVREKSRNLTIIKEALE-ALYGRPEFVTFDEEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +  +LVVE+Y++
Sbjct: 178 NRLPLRDELTS---EVDESLVVEYYNK 201


>gi|162456220|ref|YP_001618587.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
 gi|161166802|emb|CAN98107.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
          Length = 209

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G  L+ +       K     R Y PG HGQ R     Y  ++LR 
Sbjct: 1   MARYIGPVCKLCRREGMKLYLKGERCYSEKCAYTRRPYPPGQHGQGRIKLSEY-AVRLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E++F   F+EA+R +G T   ++  LE RLD +V+R  F  +   ARQ
Sbjct: 60  KQKVRRIYGVL-ERQFSGYFQEANRRKGRTGEEMLGLLERRLDNVVHRMGFGSSRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H HV VNG+ ++I SY  + GD +E+ + +++  SVL +   A +R V  +I V+  
Sbjct: 119 LVRHGHVHVNGKRLDIPSYVVRAGDRVELTEGARKFKSVLASIGGADKRPVASWIDVDRA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    P   +D+  P  ++  LVVE+YSR
Sbjct: 179 AFTGAIKGAPIR-EDLNEP-EIREQLVVEYYSR 209


>gi|269128486|ref|YP_003301856.1| 30S ribosomal protein S4 [Thermomonospora curvata DSM 43183]
 gi|268313444|gb|ACY99818.1| ribosomal protein S4 [Thermomonospora curvata DSM 43183]
          Length = 209

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR    L+ +      PK P+  R Y PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGADCKLCRREKMKLFLKGSKCEGPKCPIEIRPYPPGEHGRGRPKETEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+F + ++ A+R  G T   L+  LE RLD +VYRA F  +   ARQ
Sbjct: 60  KQKARRIYGVL-EKQFHNYYEIANRKSGKTGDVLLQLLERRLDNVVYRAGFAKSRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYIS-VNH 172
            + H H  VNGR V+I S+   E DVIEVK KS +L   + A ++  ER  P ++  +  
Sbjct: 119 LIRHGHFKVNGRKVDIPSFLVSENDVIEVKPKSHELTPFVVARAEAGERQTPAWLEAITE 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M      +P+  +       +Q  L+VE YS+
Sbjct: 179 PTMRILIHSLPTRQQ---IDTPVQEQLIVELYSK 209


>gi|54022803|ref|YP_117045.1| 30S ribosomal protein S4 [Nocardia farcinica IFM 10152]
 gi|61215422|sp|Q5Z1L0|RS4_NOCFA RecName: Full=30S ribosomal protein S4
 gi|54014311|dbj|BAD55681.1| putative ribosomal protein S4 [Nocardia farcinica IFM 10152]
          Length = 201

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R +G T  NL+  LE+RLD +VYRA    T   ARQ V+H H
Sbjct: 59  SYG-VMEKQFRRYYEEANRQKGKTGDNLLRLLETRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG  V++ SYR  + D+I+VK+KS        A + L ER VP ++ V    +    
Sbjct: 118 FLVNGVKVDVPSYRVSQYDIIDVKEKSLSTLPFQVARETLGERPVPGWLQVLPGRLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + P   +     V +Q  L+VE+YS+
Sbjct: 178 HQEPERAQ---IDVPLQEQLIVEYYSK 201


>gi|86152218|ref|ZP_01070429.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153129|ref|ZP_01071334.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121612243|ref|YP_001001237.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|153952009|ref|YP_001398874.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|157415814|ref|YP_001483070.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81116]
 gi|167006130|ref|ZP_02271888.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|283956978|ref|ZP_06374450.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 1336]
 gi|152060941|sp|A1W1J6|RS4_CAMJJ RecName: Full=30S ribosomal protein S4
 gi|171769457|sp|A7H5U4|RS4_CAMJD RecName: Full=30S ribosomal protein S4
 gi|172047193|sp|A8FNQ6|RS4_CAMJ8 RecName: Full=30S ribosomal protein S4
 gi|85840707|gb|EAQ57958.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85844014|gb|EAQ61224.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249805|gb|EAQ72764.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81-176]
 gi|152939455|gb|ABS44196.1| ribosomal protein S4 [Campylobacter jejuni subsp. doylei 269.97]
 gi|157386778|gb|ABV53093.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 81116]
 gi|283791479|gb|EFC30276.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 1336]
 gi|307748451|gb|ADN91721.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni M1]
 gi|315931273|gb|EFV10243.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 327]
          Length = 208

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R Y PG HG  RK K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLVNG+ V+I S+R + G  IE+ +KSK    +  A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208


>gi|118626141|emb|CAL39368.1| small ribosomal protein 4 [Lophozia ventricosa var. silvicola]
          Length = 202

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKMKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|57242510|ref|ZP_00370448.1| ribosomal protein S4 [Campylobacter upsaliensis RM3195]
 gi|315639080|ref|ZP_07894248.1| 30S ribosomal protein S4 [Campylobacter upsaliensis JV21]
 gi|57016795|gb|EAL53578.1| ribosomal protein S4 [Campylobacter upsaliensis RM3195]
 gi|315480856|gb|EFU71492.1| 30S ribosomal protein S4 [Campylobacter upsaliensis JV21]
          Length = 208

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 115/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R Y PG HG RR     Y GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGARRGKISEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARKEGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LVNGR V+I S+R + G  IEV +KSK    +  A  L A+  +  ++ V  D
Sbjct: 119 LVTHGHILVNGRRVDIPSFRVEAGAKIEVAEKSKNNPQISRAIDLTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KRYGIFTRKPEREEVV---IPVEERFIVELYSK 208


>gi|86149496|ref|ZP_01067727.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596172|ref|ZP_01099409.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218563183|ref|YP_002344963.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|26399526|sp|Q9PM81|RS4_CAMJE RecName: Full=30S ribosomal protein S4
 gi|85840278|gb|EAQ57536.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191013|gb|EAQ94985.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360890|emb|CAL35691.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926789|gb|ADC29141.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927660|gb|EFV06991.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929465|gb|EFV08662.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 305]
          Length = 208

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R Y PG HG  RK K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD IVYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNIVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLVNG+ V+I S+R + G  IE+ +KSK    +  A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208


>gi|315125002|ref|YP_004067006.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018724|gb|ADT66817.1| ribosomal protein S4 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 208

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R Y PG HG  RK K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARREGNTGILLIQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLVNG+ V+I S+R + G  IE+ +KSK    +  A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208


>gi|296113774|ref|YP_003627712.1| 30S ribosomal protein S4 [Moraxella catarrhalis RH4]
 gi|295921468|gb|ADG61819.1| 30S ribosomal protein S4 [Moraxella catarrhalis RH4]
 gi|326562119|gb|EGE12447.1| 30S ribosomal protein S4 [Moraxella catarrhalis 7169]
 gi|326564516|gb|EGE14742.1| 30S ribosomal protein S4 [Moraxella catarrhalis 46P47B1]
 gi|326566268|gb|EGE16420.1| 30S ribosomal protein S4 [Moraxella catarrhalis 103P14B1]
 gi|326567080|gb|EGE17202.1| 30S ribosomal protein S4 [Moraxella catarrhalis BC1]
 gi|326568344|gb|EGE18424.1| 30S ribosomal protein S4 [Moraxella catarrhalis BC7]
 gi|326572245|gb|EGE22240.1| 30S ribosomal protein S4 [Moraxella catarrhalis BC8]
 gi|326574587|gb|EGE24527.1| 30S ribosomal protein S4 [Moraxella catarrhalis O35E]
 gi|326574843|gb|EGE24773.1| 30S ribosomal protein S4 [Moraxella catarrhalis 101P30B1]
 gi|326576167|gb|EGE26082.1| 30S ribosomal protein S4 [Moraxella catarrhalis CO72]
          Length = 213

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 17/218 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P + ++      PG HG  +     Y   QLR K
Sbjct: 1   MARYIGPKLKLSRREGTDLQLKSGVKPYDVKTKKAGRVPGQHGNSQNKTSEYAS-QLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K+ YG + E++F + +KEA R RG T  NL+  LE RLD +VYR  F  T   ARQ 
Sbjct: 60  QKVKRMYGVL-ERQFSNYYKEAARERGATGENLLVTLERRLDNVVYRMGFGATRAEARQL 118

Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168
           V+HR +++          VNI S + ++GDVI V +KSK+   +  A +LA +R +P ++
Sbjct: 119 VSHRAIMLKKAGRDEFVRVNIPSIQVQDGDVIAVHEKSKEQLRIKNAVELATQRGIPAWL 178

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+H  +  TF   P   +    P  +  NL+VE YS+
Sbjct: 179 EVDHSKLQGTFKSAPERSE---LPAEINENLIVELYSK 213


>gi|300932967|ref|ZP_07148223.1| 30S ribosomal protein S4 [Corynebacterium resistens DSM 45100]
          Length = 201

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G   S    R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPVTRKSRRLRVDLVG-GDSSFERRPYPPGQAGRARIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFRRYYAEANRRPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+  N+ S+R  + D+I+V++KS+ +    EA + L +  VP ++ V    +    
Sbjct: 118 FTVNGKKTNVPSFRVTQYDIIDVREKSRSMLWFEEAQERLVDAVVPAWLQVVPATLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVELYSK 201


>gi|295099742|emb|CBK88831.1| SSU ribosomal protein S4P [Eubacterium cylindroides T2-87]
          Length = 202

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 4/206 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  K  RR+G ++       +  R+Y PG HG  R++K + +GLQL+ KQ+++ 
Sbjct: 1   MSRNTGSTWKKSRRLGFSI-LETGEELTRRNYVPGQHGNARRAKLTNYGLQLQEKQRIRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SEK+F + + +A +  G +  NL+  LESRLD +VYR  F  T   ARQ VNH H
Sbjct: 60  TY-QLSEKQFYNTYIKASKRPGPSGENLLVMLESRLDNLVYRMGFARTRRGARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I SY+ K G VIEV+++ K ++ V EA + A   V  ++ V+ +N   T+V
Sbjct: 119 ILVNGKKVDIPSYQVKPGTVIEVRERDKNMSVVAEALEAATTRV-AFVEVDAENKKGTYV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +       +   LVVEFY+R
Sbjct: 178 RYPERNELFTAQ-PINELLVVEFYNR 202


>gi|26399200|sp|Q9SMG1|RR4_FUNHY RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|6015522|emb|CAB57798.1| small ribosomal protein 4 [Funaria hygrometrica]
          Length = 201

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S       Q    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGVLPGLTNKTPQLKSSSP----NQSAAKKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           VLVN   V+I SYRCK  D I VK + K  A + +    +++  VP +++ +        
Sbjct: 116 VLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKAKVPNHLTFDSTQKKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 176 NQI---LDRESIGLKINELLVVEYYSR 199


>gi|311744779|ref|ZP_07718575.1| 30S ribosomal protein S4 [Aeromicrobium marinum DSM 15272]
 gi|311311896|gb|EFQ81817.1| 30S ribosomal protein S4 [Aeromicrobium marinum DSM 15272]
          Length = 202

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+G +L G   +    R Y PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPLTKKSRRLGVDLVG-GDAAFERRPYPPGQHGRTRIKESEYR-TQLQEKQKARY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++ A R  G T  NL++ LESRLD +VYR+    T   ARQ V H H
Sbjct: 59  TYGVL-EKQFRRYYELASRRPGKTGDNLLTMLESRLDNVVYRSGLARTRRHARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
            LVNG   NI S++  + D+I+VK KS +    + A +  + D VP ++ V+        
Sbjct: 118 FLVNGVKTNIPSFQVSKFDIIDVKPKSLETTPFIIARETHDSDTVPAWLDVSPTRGRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + P   +     V +Q  L+VE+YS+
Sbjct: 178 HQQPVREQ---ITVPIQEQLIVEYYSK 201


>gi|38233157|ref|NP_938924.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae NCTC 13129]
 gi|61215596|sp|Q6NJ64|RS4_CORDI RecName: Full=30S ribosomal protein S4
 gi|38199416|emb|CAE49059.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae]
          Length = 201

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-EKQFRRYYAEANRLPGKTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ +N+ SYR  + D+I+V++KS+++    EA + L +  VP ++ V    +    
Sbjct: 118 FTVNGKKINVPSYRVSQYDIIDVREKSQKMIWFEEAQENLLDAVVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201


>gi|332181992|gb|AEE17680.1| ribosomal protein S4 [Treponema brennaborense DSM 12168]
          Length = 211

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 9/213 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ R   + L  +       K P+N +   PG   + R  K S +G+QLR 
Sbjct: 1   MARYTGPVCRLCRTEQKKLCLKGDRCKSDKCPINKKRGAPGKDPKARTGKKSEYGVQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQKMK+ YG + EK+F   F+ A R  G T  NLI  LESRLD +V+R  F  +   ARQ
Sbjct: 61  KQKMKRIYGML-EKQFHLTFEHAQRMPGVTGDNLICLLESRLDNVVFRMHFASSRTQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173
            V H H+LVNG+SVNI SY  + GDV+EVK+ SK+L  +L+A  ++++  V  +I+++ D
Sbjct: 120 LVLHGHILVNGKSVNIPSYEVRPGDVVEVKENSKKLTVILDALKEVSKSGVMPWINLDVD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +   P  ++ +     ++  LVVE YS+
Sbjct: 180 AQKGVYTAKPRRVEVIDL-ADIKEQLVVELYSK 211


>gi|325126867|ref|YP_004286104.1| ribosomal protein S4 [Fragaria vesca subsp. vesca]
 gi|324022779|gb|ADY15353.1| ribosomal protein S4 [Fragaria vesca subsp. vesca]
          Length = 201

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKP----RAGSDLRTQSRPGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I V+ + K  A +          ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVRDEQKSKALIQNYLGSSPPEELPKHLTLDPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|315653729|ref|ZP_07906649.1| 30S ribosomal protein S4 [Lactobacillus iners ATCC 55195]
 gi|315489091|gb|EFU78733.1| 30S ribosomal protein S4 [Lactobacillus iners ATCC 55195]
          Length = 208

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   ++K S +G QL+ KQK++ 
Sbjct: 6   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGDHGPGNRTKVSEYGEQLKEKQKLRW 64

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +G ++E+++R++F  A + R      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 65  MFG-LNERQYRNLFVLAGKIREGKHGVNFMIMLEKRLDNVVYRLGLATTREQARQLVNHG 123

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ V+I S++ K G  I +K+KSK L  V +A + A    P +++ +   M  + 
Sbjct: 124 HILVDGKRVDIPSFQVKVGQEISLKEKSKNLQQVKDALE-ATVSRPAFVTFDESKMTGSL 182

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +  P    +  +LVVE+Y++
Sbjct: 183 VRLPERDEMEP---EIDESLVVEWYNK 206


>gi|33239861|ref|NP_874803.1| 30S ribosomal protein S4 [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|41017828|sp|Q7VDG7|RS4_PROMA RecName: Full=30S ribosomal protein S4
 gi|33237387|gb|AAP99455.1| Ribosomal protein S4 [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 202

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K+    RS  PG HG  R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLTRKAA--KRSNPPGQHGNARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE++     K+A    G T  NL+  LE RLD + +R  F PTI  +RQ VNH H
Sbjct: 58  NYG-ISERQLVRYVKKARAMEGSTGTNLLKLLEGRLDNVCFRLGFGPTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG++++I SY+CK GD I ++++           +     +VP ++ +    M A  
Sbjct: 117 VTVNGKTLDIASYQCKSGDTIAIRERKGSKKLAEGNLEFPGLANVPPHLELEKSKMTAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 T---GKCDREWVAIEINELLVVEYYSR 200


>gi|302543334|ref|ZP_07295676.1| ribosomal protein S4 [Streptomyces hygroscopicus ATCC 53653]
 gi|302460952|gb|EFL24045.1| ribosomal protein S4 [Streptomyces himastatinicus ATCC 53653]
          Length = 208

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR  + L+ +       K P+  R Y PG HG+ R     Y  LQLR 
Sbjct: 1   MARYTGADCKRCRREKQKLFLKGSKCESAKCPIEIRPYPPGEHGRGRTKDSEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  + EA++  G T  NL+  LE+RLD +VYRA F  +   ARQ
Sbjct: 60  KQKATRIYGVL-EKQFRGYYAEANKKTGKTGENLLRILETRLDNVVYRAGFAKSRDHARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H  VNG   +I S R    D+IEV+QKS+ +     A ++  +R VP ++     
Sbjct: 119 LVRHGHFTVNGVKTDIPSARVAVNDIIEVRQKSRTMTPFQVAVAEAGDRTVPAWLEAIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P           +Q  L+VE YS+
Sbjct: 179 QLRILVHSMPERQ---VIDTQVQEQLIVELYSK 208


>gi|148241720|ref|YP_001226877.1| 30S ribosomal protein S4 [Synechococcus sp. RCC307]
 gi|172047802|sp|A5GRL5|RS4_SYNR3 RecName: Full=30S ribosomal protein S4
 gi|147850030|emb|CAK27524.1| 30S ribosomal protein S4 [Synechococcus sp. RCC307]
          Length = 202

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   ++ ++ RR+G+      K+    RSY PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGARLRVTRRLGDLPGLTRKAA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PTI  +RQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQGGSTGTNLLKLLENRLDNVCFRLGFGPTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNGR V+I SY+CK GDVI +++K           +     ++P ++ +    + A  
Sbjct: 117 VTVNGRVVDIASYQCKAGDVIAIREKKPSKKLAETNLEFPGLANIPPHLELEKSKLTAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V      +     + +   LVVE+YSR
Sbjct: 177 V---GKCEREWVALEINELLVVEYYSR 200


>gi|118625943|emb|CAL39293.1| small ribosomal protein 4 [Anastrophyllum tubulosum]
 gi|118625945|emb|CAL39294.1| small ribosomal protein 4 [Anastrophyllum auritum]
 gi|118625951|emb|CAL39297.1| small ribosomal protein 4 [Anastrophyllum auritum]
 gi|118625953|emb|CAL39298.1| small ribosomal protein 4 [Anastrophyllum tubulosum]
 gi|118625955|emb|CAL39299.1| small ribosomal protein 4 [Anastrophyllum auritum]
 gi|118625977|emb|CAL39310.1| small ribosomal protein 4 [Anastrophyllum tubulosum]
 gi|118625979|emb|CAL39311.1| small ribosomal protein 4 [Anastrophyllum auritum]
 gi|118625983|emb|CAL39313.1| small ribosomal protein 4 [Anastrophyllum tubulosum]
 gi|118626001|emb|CAL41738.1| small ribosomal protein 4 [Anastrophyllum tubulosum]
          Length = 202

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200


>gi|284992847|ref|YP_003411401.1| 30S ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
 gi|284066092|gb|ADB77030.1| ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
          Length = 208

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR    L+ +      PK P+  R Y PG HG+ R     Y  LQLR 
Sbjct: 1   MARYTGADCRMCRREKMKLFLKGSKCESPKCPIEIRPYPPGEHGRGRSKDSEYL-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+FR  ++EA++  G T   L+  LESRLD +VYRA F  +   ARQ
Sbjct: 60  KQKARRIYGVL-EKQFRGYYEEANKKSGKTGEVLLQILESRLDNVVYRAGFAESRDMARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H+ VNGR V+I SYR    D+IEV +KS+++     A ++  ER VP ++ V   
Sbjct: 119 LVRHGHIRVNGRKVDIPSYRVASNDIIEVAEKSRRMLPFEIAQARAGERPVPPWLEVISS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P+          +Q  L+VE YS+
Sbjct: 179 QLRVLVHSVPARQ---VIDTPVQEQLIVELYSK 208


>gi|260583938|ref|ZP_05851686.1| 30S ribosomal protein S4 [Granulicatella elegans ATCC 700633]
 gi|260158564|gb|EEW93632.1| 30S ribosomal protein S4 [Granulicatella elegans ATCC 700633]
          Length = 203

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K+ RR+G +L G  K  +  R Y PG HG   +SK S +G QL+ KQK++ 
Sbjct: 1   MSRYTGPSWKLSRRLGISLSGTGKE-IARRPYAPGQHGPNNRSKLSEYGQQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++FK+A + +      N +  LE RLD +VYR     T   ARQ VNH 
Sbjct: 60  MYG-MNERQFATLFKKAGKIKEGKHGENFMILLEQRLDNVVYRLGLASTRRQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV VNG+ V+I S++ + GDV+ V++KS+ L  + E+ +      PE+++ + + +  + 
Sbjct: 119 HVTVNGKRVDIPSFQVQVGDVVGVREKSRNLTIIKESLESL-YGRPEFVTFDEEKLEGSL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +       +  +L+VE+Y++
Sbjct: 178 NRLPLRDELTS---DVDESLIVEYYNK 201


>gi|198282663|ref|YP_002218984.1| 30S ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667358|ref|YP_002424856.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226697790|sp|B7J4A3|RS4_ACIF2 RecName: Full=30S ribosomal protein S4
 gi|226697791|sp|B5EM98|RS4_ACIF5 RecName: Full=30S ribosomal protein S4
 gi|198247184|gb|ACH82777.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519571|gb|ACK80157.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 208

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+K      ++ RR G  L+ +       K PV+ R+Y PG HGQRR     Y G QLR 
Sbjct: 1   MAKYTGPSCRLCRREGGKLFLKGEKCFSDKCPVSIRAYAPGQHGQRRGRVSEYGG-QLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR  F+ A ++RG T   L+ FLE RLD + YR  F  +   ARQ
Sbjct: 60  KQKIRRIYGVL-EGQFRRYFQRASQARGVTGELLLRFLELRLDNVAYRLGFGASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H+LVNGR V+I SY+ + GDV+ V + ++    +  + +  A R  PE++S++  
Sbjct: 119 VVRHGHILVNGRRVDIPSYQVRAGDVVSVAEAARTHIRIAASVEATAGRGFPEWVSMDTT 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + AT   +P      P    +   +VVE YS+
Sbjct: 179 ELKATIKAVPVREDMAP---DLNEQVVVELYSK 208


>gi|323703521|ref|ZP_08115167.1| ribosomal protein S4 [Desulfotomaculum nigrificans DSM 574]
 gi|323531512|gb|EGB21405.1| ribosomal protein S4 [Desulfotomaculum nigrificans DSM 574]
          Length = 208

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR G  L+ +       K  V+ RSY PG HGQ RK    Y G+QLR 
Sbjct: 1   MARYTGPHCRLCRREGLKLYLKGDRCYTGKCAVDRRSYAPGQHGQGRKKISEY-GIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK FR+ F+ A+R  G T  NL+  LE RLD ++YR     +   ARQ
Sbjct: 60  KQKARRIYGVL-EKPFRNYFERAERQPGITGENLLRLLERRLDNVIYRLGLGASRVEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  VNGR VNI SY+ + GD I V++KSK+   + E  +  AER    ++  + +
Sbjct: 119 LVRHGHFTVNGRKVNIPSYQVRVGDEIAVREKSKESPRIKELMERAAERTPVAWLEYDAN 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              A  V +P+  +     V +Q +L+VE YSR
Sbjct: 179 EAKARVVALPTRDQ---IDVPVQDHLIVELYSR 208


>gi|284928899|ref|YP_003421421.1| 30S ribosomal protein S4P [cyanobacterium UCYN-A]
 gi|284809358|gb|ADB95063.1| SSU ribosomal protein S4P [cyanobacterium UCYN-A]
          Length = 202

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+P   R+Y PG HGQ R+ +  Y  ++L  KQK+  
Sbjct: 1   MSRYRGPRLRVVRRLGELPGLSRKNP--RRTYPPGQHGQGRRKRSEY-AVRLEEKQKLLY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     K+A R+ G T   L+  LE RLD  V+R     TI  ARQ VNH H
Sbjct: 58  NYG-VTEKQLIRYMKKARRATGSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVNHCH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNGR+VNI SY+C+ GD+I V+        V    Q     ++PE++  + +      
Sbjct: 117 VLVNGRTVNIASYQCRAGDIISVRNNDNSRRMVEANMQYPGLANLPEHLEFDKNTFTGKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +          + +   L+VE+YSR
Sbjct: 177 NDVIKR---EWVALQINELLIVEYYSR 200


>gi|149922188|ref|ZP_01910626.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1]
 gi|149816928|gb|EDM76413.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1]
          Length = 202

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 11/205 (5%)

Query: 9   HKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
            ++ RR  + L+ +       K   + R Y PG HGQ R+ +PS +G QLR KQK+K+ Y
Sbjct: 2   CRLCRREDQKLFLKGDRCFSEKCAYDRRQYPPGQHGQGRRRRPSDYGHQLREKQKVKRMY 61

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G + EK+FR  + +A R +G T  NL+S LE RLD +  R  F  +   ARQ V H H  
Sbjct: 62  G-LLEKQFRGYYFKAARMKGITGENLLSLLERRLDNVAVRCGFAASHAEARQLVRHGHFT 120

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +NG+ VNI SY+ +EG+ I V++KS+++  +++A    +R  +P ++ ++ DN  A    
Sbjct: 121 INGKKVNIPSYQVREGEEIVVREKSRKIQKIVDALAKLDRSPLPTWLEIDRDNFKAKIKN 180

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P           +   L+VE YS+
Sbjct: 181 VPQRSD---ISADIDEQLIVELYSK 202


>gi|153012223|ref|YP_001381738.1| ribosomal protein S4 [Medicago truncatula]
          Length = 201

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    + G  L  Q R SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKGP----TVGSELKNQSRSSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  K + K    +  + + A R+ +P +++++        
Sbjct: 116 VLVNGRIVDIPSYRCKPEDIITAKDEQKSRTLIQNSLESAPREKLPIHLTLDPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|86739322|ref|YP_479722.1| 30S ribosomal protein S4 [Frankia sp. CcI3]
 gi|123751487|sp|Q2JFE9|RS4_FRASC RecName: Full=30S ribosomal protein S4
 gi|86566184|gb|ABD09993.1| SSU ribosomal protein S4P [Frankia sp. CcI3]
          Length = 209

 Score =  194 bits (494), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 112/214 (52%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR    L+ +      PK P+  R Y PG HG+ R     Y  LQ R 
Sbjct: 1   MARYTGADCKRCRREKTKLFLKGSKCDTPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  + EA+R  G T   L+  LESRLD +VYR  F P+  AARQ
Sbjct: 60  KQKCARIYGVL-EKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172
            V H HV VNGR V+I SYR  E D++E+  K+++L   + A + A   R VP ++ V  
Sbjct: 119 AVRHGHVQVNGRKVDIPSYRISENDIVEIAPKARELTPFIVARETAGQGRAVPAWLEVIP 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +      +P+          +Q  L+VE YS+
Sbjct: 179 SQLRILVHSLPARQ---VIDTQVQEQLIVELYSK 209


>gi|297180260|gb|ADI16479.1| hypothetical protein [uncultured bacterium HF4000_05M23]
          Length = 208

 Score =  194 bits (493), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 9/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP--KSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQK 57
           M++    K K  RR G  L  RP  K     R   PG    Q+R+ + S +G QLR KQK
Sbjct: 1   MARYTGPKCKNCRRFGMKLCSRPAGKCAWERRKSSPGDKSTQQRRRRISEYGTQLREKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
            +  YG + E++FR+ +K+A R  G T   L+  LESRLD +VYR  F  +   ARQ V 
Sbjct: 61  ARAIYGVL-ERQFRNYYKKASRLEGVTGDRLLQLLESRLDNVVYRLGFADSRPQARQIVG 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS--VLEASQLAERDVPEYISVNHDNM 175
           H H+ VNG+ VNI SY+   GD I  ++KSK+     ++ A   +   +P +++V+ D  
Sbjct: 120 HGHIRVNGKKVNIPSYQVSPGDRISWREKSKETGLFDIVSAGMGSNSIIPSWLNVDSDKA 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   V +P   K     + +    +VE+YSR
Sbjct: 180 LGEVVTLP---KPSDVELAIDTRQIVEYYSR 207


>gi|118627522|emb|CAL39395.1| small ribosomal protein 4 [Lophozia ciliata]
          Length = 202

 Score =  194 bits (493), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKIKIPSHLTFDLPQLKGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|90101684|sp|Q3S664|RS4_CORAM RecName: Full=30S ribosomal protein S4
 gi|73913590|gb|AAZ91711.1| 30S Ribosomal protein S4 [Corynebacterium stationis]
          Length = 201

 Score =  194 bits (493), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      ++ RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK K 
Sbjct: 1   MARYTGPATRVSRRLRVDLVG-GDMAFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  + EA+R  G T  NL+  LE+RLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-ERQFRRYYVEANRQPGKTGDNLVVLLETRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+  N+ SYR  + D+I+++++S+++    EA   L E  VP ++ V  +++    
Sbjct: 118 FTVNGKKTNVPSYRVSQYDIIDIRERSRKMEWFEEAQDRLGEAVVPAWLQVVPESLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201


>gi|162448043|ref|YP_001621175.1| 30S ribosomal protein S4 [Acholeplasma laidlawii PG-8A]
 gi|189045362|sp|A9NHG9|RS4_ACHLI RecName: Full=30S ribosomal protein S4
 gi|161986150|gb|ABX81799.1| small subunit ribosomal protein S4 [Acholeplasma laidlawii PG-8A]
          Length = 198

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 125/206 (60%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  K+ RR+G ++    K  +  R Y PG HGQ R+SK S +G+QL+ KQK++ 
Sbjct: 1   MSRFTGSTWKVSRRLGYSISETGKE-LKKRPYAPGQHGQ-RRSKLSNYGIQLQEKQKVRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+F+  F E+ + +G    N +  LESRLD +VYR  F  T   ARQ VNH H
Sbjct: 59  VYG-VSEKQFKKTFLESAKMQGKQGENFLKLLESRLDNVVYRLGFTKTRAQARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SYR   G  +++K+KSK L  V EA + A+    +Y++++ +  V TF 
Sbjct: 118 ILVDGKKVDIPSYRLAPGQTVQLKEKSKNLTIVKEALE-AQFAHVDYVALDANG-VGTFS 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   + +     +   L+VEFY+R
Sbjct: 176 RLPERNEFL---FDINEQLIVEFYNR 198


>gi|86606184|ref|YP_474947.1| 30S ribosomal protein S4 [Synechococcus sp. JA-3-3Ab]
 gi|123506364|sp|Q2JUD6|RS4_SYNJA RecName: Full=30S ribosomal protein S4
 gi|86554726|gb|ABC99684.1| ribosomal protein S4 [Synechococcus sp. JA-3-3Ab]
          Length = 203

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 9/208 (4%)

Query: 1   MSKRESSKHKIDRRIG--ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+    + KI RR G  +      K P NT    PG+HG  RK K  Y  ++L  KQK+
Sbjct: 1   MSRYTGPRLKIIRRFGGLDLPGLTRKRPKNT--NPPGMHGAERKKKSEY-AIRLEEKQKV 57

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG +SE++     ++A RS+G T   L+  LE RLD IV+R    PTI AARQ V+H
Sbjct: 58  RLNYG-VSERQMLRYMRKARRSKGSTGLALLQMLEMRLDCIVFRLGMAPTIPAARQLVSH 116

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+ VNGR V I SY CK GDVI V+ K      V   ++     +P+Y+  + + +   
Sbjct: 117 GHIEVNGRKVTIPSYGCKVGDVITVRNKESSRKLVAAYAEYPGLFLPDYLEFDKEKLRGR 176

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +P   +       +   LVVEFYSR
Sbjct: 177 IKELPPREQ---ICAPVNELLVVEFYSR 201


>gi|251772517|gb|EES53083.1| ribosomal protein S4 [Leptospirillum ferrodiazotrophum]
          Length = 209

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 112/214 (52%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      +  RR G  L+ +       K  ++ R+Y PG HGQ R     Y GLQLR 
Sbjct: 1   MARYNGPVCRFCRREGVKLFLKGARCLSAKCAIDRRAYPPGEHGQSRAKASEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG I E++FR  FK A R +G+T  +L+S LE RLD++VY   +  +   +R 
Sbjct: 60  KQKVKRIYG-ILERQFRKTFKVASRKKGNTGQSLLSALEMRLDSVVYHIGWGASRNESRM 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNH 172
            V H HVLVNG+ VNI S+ C+  D I +    +Q   V    + AE    V  ++ V+ 
Sbjct: 119 LVTHGHVLVNGKKVNIPSFSCRVNDTITLSSSMQQNEKVSANFRDAEIRGVVSPWLEVDK 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++  A    IP         + +  NLVVE YSR
Sbjct: 179 NSFKAIVKDIPQRDA---INIHIAENLVVELYSR 209


>gi|312130523|ref|YP_003997863.1| ssu ribosomal protein s4p [Leadbetterella byssophila DSM 17132]
 gi|311907069|gb|ADQ17510.1| SSU ribosomal protein S4P [Leadbetterella byssophila DSM 17132]
          Length = 201

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 108/206 (52%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE + G  K  +  ++Y PG HG+ R+ K S + LQL  KQK+K 
Sbjct: 1   MARYTGPKSKISRKFGEAVLGPSK-ALAKKAYPPGQHGRGRRGKKSDYALQLLEKQKIKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++F  IF  A    G T  NLI   ESRLD IVYR    PT  AARQ V H+H
Sbjct: 60  TYGVL-ERQFARIFHLAGVKEGQTGENLIKLCESRLDNIVYRLGIAPTRRAARQLVTHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L++G   NI S   K G  + V++KSK L ++  A+ L       ++  ++  +   F+
Sbjct: 119 ILLDGEVSNIPSILVKPGQKVAVREKSKALDTITTATSLNAAKKYGWLEFDNAELTGLFI 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P   +    P       VVE Y++
Sbjct: 179 NYPDLEQ---IPEQFNVQAVVELYNK 201


>gi|300779797|ref|ZP_07089653.1| 30S ribosomal protein S4 [Corynebacterium genitalium ATCC 33030]
 gi|300533907|gb|EFK54966.1| 30S ribosomal protein S4 [Corynebacterium genitalium ATCC 33030]
          Length = 201

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G   S    R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVGGDMS-FERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEANRLPGKTGDNLLVLLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG   N+ SY+  + D+I+V++KS+ +    +A   L +  VP ++ V  + +    
Sbjct: 118 FTVNGVKTNVPSYQVTQYDIIDVREKSRNMLWFEDAQDNLVDSVVPAWLQVVPETLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVELYSK 201


>gi|289641139|ref|ZP_06473307.1| ribosomal protein S4 [Frankia symbiont of Datisca glomerata]
 gi|289509080|gb|EFD30011.1| ribosomal protein S4 [Frankia symbiont of Datisca glomerata]
          Length = 208

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 113/213 (53%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR    L+ +      PK P+  R Y PG HG+ R     Y  LQ R 
Sbjct: 1   MARYTGADCKRCRREKTKLFLKGSKCESPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG I EK+FR  + EA+R  G T   L+  LESRLD +VYRA F P+  AARQ
Sbjct: 60  KQKCARIYG-ILEKQFRGYYDEANRRTGKTGDELLKILESRLDNVVYRAGFAPSRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H HV+VNG  V+I SYR  E D++E+  K+++L   + A + A +R  P ++ V   
Sbjct: 119 AVRHGHVVVNGGKVDIPSYRVSENDIVEIAPKARELTPFIIARETAGQRTPPPWLEVIPS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +P+          +Q  L+VE YS+
Sbjct: 179 QLRVLVHSLPARQ---VIDTQVQEQLIVELYSK 208


>gi|118625957|emb|CAL39300.1| small ribosomal protein 4 [Lethocolea glossophylla]
 gi|118625959|emb|CAL39301.1| small ribosomal protein 4 [Lethocolea glossophylla]
          Length = 202

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKAKSTY---IDHSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+   E RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-VTERQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GDVI VK K K  + +++   L ++  VP +++ +   +    
Sbjct: 117 ISINNDIVDIPSYNCEPGDVITVKDKQKSQSIIIKNIDLFQKSKVPSHLTFDPTELRGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINRD---LINLKINELLVVEYYSR 200


>gi|118626107|emb|CAL41756.1| small ribosomal protein 4 [Anastrophyllum donnianum]
          Length = 202

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVELKINELLVVEYYSR 200


>gi|118626149|emb|CAL39372.1| small ribosomal protein 4 [Lophozia longidens]
          Length = 202

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSMITKNLNLFQKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|227487075|ref|ZP_03917391.1| ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227093149|gb|EEI28461.1| ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 201

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G        R Y PG  G+ R  +  Y  +QL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRTDLVG-GDMAFERRPYPPGQAGRARIKESEYL-IQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+F   ++EA R +G T  NL+  LESRLD ++YRA    T   ARQ V H H
Sbjct: 59  TYG-IMEKQFHRYYEEAARRKGKTGDNLVILLESRLDNVIYRAGLARTRRQARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG   NI S++  + D+I+VK+KS+++    EA   L +  VP ++ V    +    
Sbjct: 118 FLVNGVKTNIPSFQVSQYDIIDVKEKSRKMLWFEEAQDGLVDAVVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201


>gi|298243942|ref|ZP_06967749.1| ribosomal protein S4 [Ktedonobacter racemifer DSM 44963]
 gi|297556996|gb|EFH90860.1| ribosomal protein S4 [Ktedonobacter racemifer DSM 44963]
          Length = 210

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 72/214 (33%), Positives = 109/214 (50%), Gaps = 12/214 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-----KSPVNT--RSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G  L+ +      K  +    R+  PG HG  R  K S +  QLR
Sbjct: 1   MARYTGPVCKLCRREGVKLFLKGDKCIQKCTLERHGRNTRPGQHGTSRARKESGYAKQLR 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQ++++ YG + E++F   F  A R  G TS NL+  LE RLD +VYR  F  +   AR
Sbjct: 61  EKQRVRRTYGVL-ERQFSKHFVAAARRPGKTSENLLQILEMRLDNLVYRLGFADSRAQAR 119

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNH 172
           Q VNH H +VNGR  +I S+  K  DVI V+  +K L      A  L+++ +P ++ ++ 
Sbjct: 120 QLVNHGHFVVNGRKTDIPSFIAKPNDVIAVRDSNKSLEYFKSRALLLSQKGIPTWLRLDV 179

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + M    + +PS        +     +VVE+Y R
Sbjct: 180 NAMSGRVLTLPSRTD---LELPFDEQMVVEYYQR 210


>gi|225849518|ref|YP_002729683.1| 30S ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644198|gb|ACN99248.1| ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 204

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           M +      K+ RR+G  + G        R++ PG HG+ + + K S +G++L+ KQK+K
Sbjct: 1   MGRYIGPLTKVSRRLGVFIGG-DLESFQKRNFPPGQHGRTQGRKKLSDYGVRLQEKQKLK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E +FR  F+EA +  G+T   L+  LE RLD +VYR  F  T   ARQ V H 
Sbjct: 60  FLYGGLRESQFRRYFEEASKKAGNTGVVLLQLLERRLDNVVYRLGFAKTRQQARQLVKHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178
           H  VNG+ V+I SYR   GD+IEV++KSK+LA   E  +  + R +P+++ ++ +NM   
Sbjct: 120 HFTVNGKKVDIPSYRVDAGDIIEVREKSKKLAIFKENLENRDPRSIPKWLELDKENMRGK 179

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYS 205
            V      +++   + +    ++EFYS
Sbjct: 180 VV---EIPEEIELEIPVNVQYIIEFYS 203


>gi|91775227|ref|YP_544983.1| 30S ribosomal protein S4 [Methylobacillus flagellatus KT]
 gi|91775371|ref|YP_545127.1| 30S ribosomal protein S4 [Methylobacillus flagellatus KT]
 gi|123451995|sp|Q1H2K1|RS4_METFK RecName: Full=30S ribosomal protein S4
 gi|91709214|gb|ABE49142.1| SSU ribosomal protein S4P [Methylobacillus flagellatus KT]
 gi|91709358|gb|ABE49286.1| SSU ribosomal protein S4P [Methylobacillus flagellatus KT]
          Length = 205

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 5/205 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           MS+    + K+ R +G +L G  +  +  R   PG HG +  + K S FG++L+ KQK++
Sbjct: 1   MSRFTGPRLKVMRALGIDLPGLSRKTIEARPTPPGQHGAKNTRRKKSDFGVKLQEKQKLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SEK+ R +  +A + +  T   L+  LE RLD +V+RA F PTI AARQ V HR
Sbjct: 61  FNYG-LSEKQLRRLMVDARKGKSPTGETLLQLLERRLDNVVFRAGFAPTIAAARQLVTHR 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV++NG+SVNI S R + GD I +K  S +L  V+E         PE+IS    +  A  
Sbjct: 120 HVMLNGKSVNIPSIRVRVGDEISLKASSTKLPIVVETLANPPLTRPEWISWAEQSQQAKV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
             +P+  +DVP+PV +    VVE+Y
Sbjct: 180 AHLPA-AEDVPFPVDV--QQVVEYY 201


>gi|262341037|ref|YP_003283892.1| 30S ribosomal protein S4 [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272374|gb|ACY40282.1| 30S ribosomal protein S4 [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 208

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 86/207 (41%), Positives = 120/207 (57%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M+K    K KI RR GE ++G  K   + R Y  G HG  RR+ K S + +QL  KQK K
Sbjct: 7   MAKYIGPKTKISRRFGECIYGEDKY-FDRRKYPSGQHGNNRRRGKRSEYFIQLIEKQKAK 65

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++F  +F EA R +G T   L+   ESRLD IV+R KF P+  +ARQ V+HR
Sbjct: 66  YTYG-ILERQFEKLFFEAARKKGITGELLLQACESRLDNIVFRLKFAPSRSSARQIVSHR 124

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VN R VNI S+R K GD I V++KSK+   +L++ Q     + E++  +  NMV  F
Sbjct: 125 HIFVNDRIVNIPSFRLKPGDKIGVREKSKKHPIILDSIQKKTGTLVEWLIFDEKNMVGIF 184

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +    P  ++  L+VE YS+
Sbjct: 185 RVMPKRTQ---IPENIKEQLIVELYSK 208


>gi|118625949|emb|CAL39296.1| small ribosomal protein 4 [Anastrophyllum auritum]
          Length = 202

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRXKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200


>gi|315925228|ref|ZP_07921442.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621462|gb|EFV01429.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 209

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR-------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++   +  +  RR G  L+ +        K     R   PG    +R++K S +GLQLR
Sbjct: 1   MARYTEAACRQCRREGTKLYLKGERCYAKDKCAFGKRPTPPGG-APKRRAKLSEYGLQLR 59

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F  A++ +G T  NL++ LE+RLD  VYR     +   AR
Sbjct: 60  EKQKVKRIYGVL-EKQFRHYFDVAEKQQGITGENLLALLETRLDNAVYRMGMGQSRKEAR 118

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNH 172
           Q V H H LVNG  VN+ SY+ K GDVI V  KSK+ A   E  +  E R +  ++  + 
Sbjct: 119 QLVLHGHFLVNGAKVNVASYQLKAGDVISVADKSKKSAKFKEVVESTENRAIVPWLEADL 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +    +  PS        + +  +L+VE YS+
Sbjct: 179 EKLSGKVIGKPSR---EDIDIEIAEHLIVELYSK 209


>gi|307128728|ref|YP_003880758.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri CARI]
 gi|306483190|gb|ADM90060.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri CARI]
          Length = 204

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 78/208 (37%), Positives = 114/208 (54%), Gaps = 6/208 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY--FGLQLRAKQKM 58
           M+K    K KI R+ GE ++G        + Y PG HG  R+       + +QL  KQK+
Sbjct: 1   MAKYIGPKTKISRKFGELIYGNYNKSFEKKKYPPGQHGNNRRRNIKKSFYSIQLLEKQKV 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I E++FR +F +A + +G     L+   ESRLD IVYR K   +   ARQ V+H
Sbjct: 61  KYTYG-ILERQFRKMFYKASKKKGIKGEILLQLCESRLDNIVYRLKLSHSRPEARQLVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
           RH+ VNG+ VNI SY  K GD I +K+KSK+  +++  S      + +++S +H  M+  
Sbjct: 120 RHITVNGKIVNIPSYNLKPGDKISLKEKSKKHKAIIYDSNRLLGSIKKWLSWDHHKMIGI 179

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F  IP   +    P  +  NL+VE YS+
Sbjct: 180 FKSIPKRKQ---IPEKINENLIVELYSK 204


>gi|118626115|emb|CAL39357.1| small ribosomal protein 4 [Mesoptychia sahlbergii]
 gi|118626159|emb|CAL39377.1| small ribosomal protein 4 [Leiocolea rutheana]
 gi|118627550|emb|CAL39408.1| small ribosomal protein 4 [Leiocolea collaris]
          Length = 202

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200


>gi|257459219|ref|ZP_05624338.1| ribosomal protein S4 [Campylobacter gracilis RM3268]
 gi|257443604|gb|EEV18728.1| ribosomal protein S4 [Campylobacter gracilis RM3268]
          Length = 208

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR+G +L+ +       KS +  R Y PG HGQRR     Y G QLR 
Sbjct: 1   MARYTGPVEKLERRLGVDLFMKGERRLAGKSALLKRPYAPGQHGQRRAKLSEY-GSQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   L+  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARREGNTGAILVQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H+LV+G+ V+I SY  + G  IEV +KSK    +  A  L A+  +  ++ V  +
Sbjct: 119 LVTHGHILVDGKRVDIPSYSVRAGQKIEVIEKSKNNPQISRALDLTAQTGIVAWVDVEKE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R+P   + V   + ++   +VE YS+
Sbjct: 179 KRYGIFSRVPEREEVV---IPVEERFIVELYSK 208


>gi|19551798|ref|NP_599800.1| 30S ribosomal protein S4 [Corynebacterium glutamicum ATCC 13032]
 gi|62389453|ref|YP_224855.1| 30S ribosomal protein S4 [Corynebacterium glutamicum ATCC 13032]
 gi|26399381|sp|Q8NSV4|RS4_CORGL RecName: Full=30S ribosomal protein S4
 gi|21323328|dbj|BAB97956.1| Ribosomal protein S4 and related proteins [Corynebacterium
           glutamicum ATCC 13032]
 gi|41324787|emb|CAF19269.1| RIBOSOMAL PROTEIN S4 [Corynebacterium glutamicum ATCC 13032]
          Length = 201

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  IYG-VMEKQFRRYYAEANRRAGKTGENLVVLLESRLDNVVYRAGLANTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+++++ S+R  + D+I V++KS+++    EA   LA+  VP ++ V  +N+    
Sbjct: 118 FTVNGKAIDVPSFRVSQYDIINVREKSQKMNWFEEAQDNLADAVVPAWLQVVPENLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201


>gi|313183995|ref|YP_004021152.1| ribosomal protein S4 [Castanea mollissima]
 gi|309321522|gb|ADO65062.1| ribosomal protein S4 [Castanea mollissima]
          Length = 202

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVAT 178
           +LVNGR V+I SYRCK  D+I  + + K  A +      + RD  +P++++ +       
Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITARDEQKSRALIQNCLDSSPRDEELPKHLTFHPFQYKGL 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  S       + +   LVVE+YSR
Sbjct: 176 VNQIIDSK---WVGLKINELLVVEYYSR 200


>gi|294101656|ref|YP_003553514.1| ribosomal protein S4 [Aminobacterium colombiense DSM 12261]
 gi|293616636|gb|ADE56790.1| ribosomal protein S4 [Aminobacterium colombiense DSM 12261]
          Length = 209

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS+      ++ +  G  L+ +       K  +            R ++K S +GL+LR 
Sbjct: 1   MSRYTGPVCRLCKAEGVKLFLKGDRCFTEKCAITRGETKNKQRRGRPRAKMSEYGLRLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++++YG ++E +FR +F EA R  G T HN +  LE RLD IVYR     +   ARQ
Sbjct: 61  KQKLRRFYG-MNEGQFRRMFGEASRMSGVTGHNFLQLLERRLDNIVYRMGLATSRSQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H H  V+GR V++ SY  + G V+ V + SK++A + E ++  A R +PE++ VN +
Sbjct: 120 LVLHGHFTVDGRKVDVPSYLIRAGAVVAVAENSKEVAIIRENAEVAASRMIPEWLEVNSE 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M A  + IP   +     V +   LVVEFY+R
Sbjct: 180 RMEAKVLSIPMREQ---IDVPVNEQLVVEFYAR 209


>gi|148652261|ref|YP_001279354.1| 30S ribosomal protein S4 [Psychrobacter sp. PRwf-1]
 gi|172048490|sp|A5WCL3|RS4_PSYWF RecName: Full=30S ribosomal protein S4
 gi|148571345|gb|ABQ93404.1| SSU ribosomal protein S4P [Psychrobacter sp. PRwf-1]
          Length = 213

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 17/218 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P + ++      PG HG  R     Y  LQLR K
Sbjct: 1   MARYIGPKLKLSRREGTDLQLKSGVKPYDVKTKKAGRVPGQHGNTRNKASEY-SLQLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K+ YG + E++F + +KE+ R+RG T  +L+  LE RLD +VYR  F  T   ARQ 
Sbjct: 60  QKVKRMYGVL-ERQFANYYKESARARGATGEHLLQMLERRLDNVVYRMGFGSTRAEARQL 118

Query: 116 VNHRHVLVNG------RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYI 168
           V+HR V++          VNI S + ++GDVI + +K+K+   +  A +LA +R +PE++
Sbjct: 119 VSHRAVMIKKAGRDEFVRVNIPSIQVQDGDVIAIHEKAKEQLRIKNAIELATQRGIPEWL 178

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+H  M  TF + P     +  P  +  +L+VE YS+
Sbjct: 179 EVDHSKMQGTFKQAPDR---IDLPAEITESLIVELYSK 213


>gi|164688743|ref|ZP_02212771.1| hypothetical protein CLOBAR_02390 [Clostridium bartlettii DSM
           16795]
 gi|164602219|gb|EDQ95684.1| hypothetical protein CLOBAR_02390 [Clostridium bartlettii DSM
           16795]
          Length = 197

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K  RR+G N+ G PK+         G    R   K S +GLQL  KQ+++ 
Sbjct: 1   MAKMMGPRFKQCRRLGLNVCGHPKAMDRA-----GRGTSRADKKLSPYGLQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+FR+  K+A++S+  T   LI  LE RLD +VYR  F  +I  ARQ V H H
Sbjct: 56  YYGVL-EKQFRNYVKKAEKSKESTGVALIQMLECRLDNVVYRLGFANSIRQARQMVVHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I S+  + GD + +++KS+      E  +    +   Y+S + D       
Sbjct: 115 ILVNGKKVDIPSFAVQVGDEVSLREKSRTNVMFKENFESGALNEYPYLSKDMDKFSGVLT 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ +   L+VEFYS+
Sbjct: 175 RLPERQE---VPIEIDEILIVEFYSK 197


>gi|118627504|emb|CAL39386.1| small ribosomal protein 4 [Diplophyllum taxifolium]
          Length = 202

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITVRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200


>gi|169830463|ref|YP_001716445.1| RNA-binding S4 domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|226732175|sp|B1I1B2|RS4_DESAP RecName: Full=30S ribosomal protein S4
 gi|169637307|gb|ACA58813.1| RNA-binding S4 domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 208

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   ++ ++ RR G  L+ +      P+  V+ R   PG H   R+ K + FG+QLR 
Sbjct: 1   MARYTDARCRLCRREGTKLYLKGDRCYSPRCAVDRRPAPPGQHTPSRR-KVTEFGIQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + E +FR+ F +A+R  G T  NL+  LE RLD ++YR     +   ARQ
Sbjct: 60  KQKVRRIYGVL-ESQFRNYFHKAERQPGVTGENLLRLLELRLDNVIYRLGLGASRAEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173
            V H H  VNGR V+I SY+ + GDVI V+++SK L  + E    A E + P ++  + +
Sbjct: 119 LVRHGHFKVNGRKVDIPSYQVRVGDVIAVRERSKGLTRIQELLDRASENNPPAWLEYDGE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             VA  V +P+  +++  PV     LVVE YSR
Sbjct: 179 RAVARVVALPTR-ENIDIPVR--EQLVVELYSR 208


>gi|118626103|emb|CAL39353.1| small ribosomal protein 4 [Lophozia setosa]
          Length = 202

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMALTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSVITKNLNLFQKLKIPSHLTFDFTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200


>gi|118627544|emb|CAL39405.1| small ribosomal protein 4 [Lophozia perssonii]
          Length = 202

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCELGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|120402446|ref|YP_952275.1| 30S ribosomal protein S4 [Mycobacterium vanbaalenii PYR-1]
 gi|145225547|ref|YP_001136225.1| 30S ribosomal protein S4 [Mycobacterium gilvum PYR-GCK]
 gi|315445899|ref|YP_004078778.1| 30S ribosomal protein S4P [Mycobacterium sp. Spyr1]
 gi|152112236|sp|A1T519|RS4_MYCVP RecName: Full=30S ribosomal protein S4
 gi|189045387|sp|A4TEJ4|RS4_MYCGI RecName: Full=30S ribosomal protein S4
 gi|119955264|gb|ABM12269.1| SSU ribosomal protein S4P [Mycobacterium vanbaalenii PYR-1]
 gi|145218033|gb|ABP47437.1| SSU ribosomal protein S4P [Mycobacterium gilvum PYR-GCK]
 gi|315264202|gb|ADU00944.1| SSU ribosomal protein S4P [Mycobacterium sp. Spyr1]
          Length = 201

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G  +S    R Y PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLGVDLVGGDQS-FEKRPYPPGQHGRARIKESEYR-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEANRLPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  V++ SYR  + D+I+VK KS        A Q A ER +P ++ V  +      
Sbjct: 118 FTVNGVKVDVPSYRVSQYDIIDVKDKSINTLPFEVARQTAGERPIPGWLQVVGERQRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVELYSK 201


>gi|118626163|emb|CAL39379.1| small ribosomal protein 4 [Tritomaria scitula]
          Length = 202

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNNTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200


>gi|42524353|ref|NP_969733.1| 30S ribosomal protein S4 [Bdellovibrio bacteriovorus HD100]
 gi|61215581|sp|Q6MJ35|RS4A_BDEBA RecName: Full=30S ribosomal protein S4 A
 gi|39576562|emb|CAE80726.1| 30S ribosomal protein S4 [Bdellovibrio bacteriovorus HD100]
          Length = 208

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS    S  K+ RR    L+ +       K     R Y PG HGQ R  K S F LQLR 
Sbjct: 1   MSCINESVCKLCRRENVKLFLKGDRCYTDKCSFERRPYPPGQHGQSR-LKFSEFALQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+YYG +SEK+F     EA+R++  T H L+ FLE+RLD +VY   +  +   ARQ
Sbjct: 60  KQKAKRYYG-VSEKQFVKYVGEANRAKELTGHALLKFLETRLDNVVYTLGYANSRREARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H L+NG+  NI S    +GDVI+V + S+++A +  A Q  A R VP ++  +H 
Sbjct: 119 LVKHNHFLLNGKRANIPSILVNKGDVIQVAESSREMAKIQSAIQAVARRSVPAWLEADHA 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               T   +P+        V ++ N++VE+YSR
Sbjct: 179 KFTGTVKDLPNR---EDVAVAVEENMIVEYYSR 208


>gi|30250077|ref|NP_842147.1| 30S ribosomal protein S4 [Nitrosomonas europaea ATCC 19718]
 gi|41017976|sp|Q82T00|RS4B_NITEU RecName: Full=30S ribosomal protein S4 B
 gi|30139184|emb|CAD86054.1| Ribosomal protein S4:S4 domain [Nitrosomonas europaea ATCC 19718]
          Length = 205

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 5/205 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    + KI R +G +L G  +  + +R   PG HG +  + + S FG++L+ KQK++
Sbjct: 1   MSRFTGPRLKIMRALGVDLPGLSRKTIASRPTPPGQHGAKLVRRRKSDFGIKLQEKQKLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SE++ R +   A +S   T   L+  LE RLD +V+RA F PT+ AARQ V+HR
Sbjct: 61  FNYG-LSERQLRHLMLNARKSTEPTGETLLQLLERRLDNVVFRAGFAPTVIAARQLVSHR 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV +NG+ VNI S R   GD I +K +S  L  VL   Q      PE++  +  +     
Sbjct: 120 HVRLNGKPVNIPSIRLNVGDEITIKPESLNLPIVLGTLQDLPLSRPEWLLWDEKDKTGKI 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
             +P+  +DVP+P+ +    VVE+Y
Sbjct: 180 THLPT-AEDVPFPIDV--QQVVEYY 201


>gi|325972637|ref|YP_004248828.1| ribosomal protein S4 [Spirochaeta sp. Buddy]
 gi|324027875|gb|ADY14634.1| ribosomal protein S4 [Spirochaeta sp. Buddy]
          Length = 213

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 11/215 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVN--TRSYGPGLHGQRRKSKPSYFGLQL 52
           M++    K +  R     L+ +       K P+N    +  PG   + R  KP+ +GLQL
Sbjct: 1   MARYTGPKCRYCRAERTKLFLKGERCHSGKCPMNDTKSTGLPGKDPRARSKKPTDYGLQL 60

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
           R KQK+K+ Y  + EK+F+  F EA R  G T  NLI  LE RLD +V+R  F  +   A
Sbjct: 61  REKQKLKRTYCML-EKQFKLTFDEAARIPGKTGENLIMLLEQRLDNVVFRLHFAASRNQA 119

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVN 171
            QFVNH H+ VNG+ V+I SYR + GDV+ V  K +++  + E   +  +  V +++S++
Sbjct: 120 AQFVNHGHIFVNGKRVSIPSYRLRPGDVVSVGVKGQKMLMIKENLKEYTKSGVCQWLSLD 179

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            D M  TFV +P   +       +   LVVE YSR
Sbjct: 180 VDAMKGTFVAVPRRSEVTELE-KINEQLVVELYSR 213


>gi|118468301|ref|YP_885905.1| 30S ribosomal protein S4 [Mycobacterium smegmatis str. MC2 155]
 gi|171472975|sp|A0QSL7|RS4_MYCS2 RecName: Full=30S ribosomal protein S4
 gi|118169588|gb|ABK70484.1| ribosomal protein S4 [Mycobacterium smegmatis str. MC2 155]
          Length = 201

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G  +S    R Y PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLGVDLVGGDQS-FEKRPYPPGQHGRARIKESEYR-QQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  SYG-VMEKQFRRYYEEANRQPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
            LVNG  V+I SYR  + D+I+VK+KS        A + A ER +P ++ V  +      
Sbjct: 118 FLVNGVKVDIPSYRVSQYDIIDVKEKSLNTLPFQIARETAGERPIPSWLQVVGERQRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE YS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVELYSK 201


>gi|118626105|emb|CAL39354.1| small ribosomal protein 4 [Barbilophozia floerkei]
          Length = 202

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + V     L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRSKQKSQSIVTRNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200


>gi|34501413|ref|NP_904200.1| ribosomal protein S4 protein [Physcomitrella patens subsp. patens]
 gi|52783338|sp|Q6YXP3|RR4_PHYPA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|34494783|dbj|BAC85050.1| ribosomal protein S4 protein [Physcomitrella patens subsp. patens]
          Length = 201

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S       Q    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           VLVN   V+I SYRCK  D I VK + K  A + +    +++  VP +++ +        
Sbjct: 116 VLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 176 NQI---LDRESIGLKINELLVVEYYSR 199


>gi|13518426|ref|NP_084786.1| ribosomal protein S4 [Lotus japonicus]
 gi|26399164|sp|Q9BBT5|RR4_LOTJA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|13358967|dbj|BAB33184.1| ribosomal protein S4 [Lotus japonicus]
          Length = 201

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    + G  L  Q R +K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----TVGSELRNQSRSTKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           V VNG  V+I SYRCK  D+I  K   K    +  + + A R ++P ++++         
Sbjct: 116 VFVNGHIVDIPSYRCKPQDIITAKDNKKSKTLIQNSLESAPREELPTHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|319442996|ref|ZP_07992152.1| 30S ribosomal protein S4 [Corynebacterium variabile DSM 44702]
          Length = 201

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S  +  RR+  +L G  +S    R Y PG  G+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGSATRKSRRLRVDLVGGDRS-FERRPYPPGQAGRGRIKESEYL-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LE+RLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYAEANRRPGKTGANLVILLETRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ +N+ S++  + D+I+V+ +S+ +    EA + L +  VP ++ V    +    
Sbjct: 118 FTVNGKKINVPSFQVSQYDIIDVRDRSRSMLWFEEAQENLLDSVVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVEFYSK 201


>gi|118626117|emb|CAL39358.1| small ribosomal protein 4 [Barbilophozia quadriloba var. glareosa]
 gi|118627546|emb|CAL39406.1| small ribosomal protein 4 [Barbilophozia quadriloba var.
           quadriloba]
          Length = 202

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNNTVDIPSYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|326383231|ref|ZP_08204919.1| 30S ribosomal protein S4 [Gordonia neofelifaecis NRRL B-59395]
 gi|326197981|gb|EGD55167.1| 30S ribosomal protein S4 [Gordonia neofelifaecis NRRL B-59395]
          Length = 201

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATKKSRRLRVDLIGGDQ-AYERRPYPPGQHGRARIKETEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R  G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEANRRSGKTGDVLLQILESRLDNVVYRAGLARTRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           + VNG  V++ SYR  + D+I+V+ KS Q      A + L +R  P ++ V    +    
Sbjct: 118 LTVNGVRVDVPSYRVSQYDIIDVRPKSLQTTPFQIAKETLGDRPTPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +     V +   L+VE+YS+
Sbjct: 178 HSLPERAQ---IEVPLTEQLIVEYYSK 201


>gi|219673972|ref|YP_002456457.1| ribosomal protein S4 [Trifolium subterraneum]
 gi|193788941|gb|ACF20537.1| ribosomal protein S4 [Trifolium subterraneum]
          Length = 201

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +    G  L  Q   ++ S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRPTD----GSKLRNQSPPTQKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  K + K    +  + + + R  +P +++++        
Sbjct: 116 VLVNGRIVDIPSYRCKPQDIITAKGEQKSRTLIQNSLESSPRGALPTHLTLHPLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + M   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLEMNELLVVEYYSR 199


>gi|118625941|emb|CAL39292.1| small ribosomal protein 4 [Lophozia jamesonii]
 gi|118626113|emb|CAL39356.1| small ribosomal protein 4 [Lophozia stolonifera]
          Length = 202

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNRKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKSKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|118626019|emb|CAL39327.1| small ribosomal protein 4 [Cryptochila paludosa]
          Length = 202

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD I +K K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIKNKQKSQSIITKNTNLFQKVKIPSHLTFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|183981109|ref|YP_001849400.1| 30S ribosomal protein S4, RpsD [Mycobacterium marinum M]
 gi|226699093|sp|B2HCX3|RS4_MYCMM RecName: Full=30S ribosomal protein S4
 gi|183174435|gb|ACC39545.1| 30S ribosomal protein S4, RpsD [Mycobacterium marinum M]
          Length = 201

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G  +S    R Y PG HG+ R     Y   QL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLGTDLVGGDQS-FEKRPYPPGQHGRARIKDSEYR-QQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRHSGKTGEELLKILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+I+V+  S        A + A +R +P ++ V  +      
Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDNSLNTVPFQIARETAGDRPIPSWLQVVGERQRILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE+YS+
Sbjct: 178 HQLPERAQ---IEVPLTEQLIVEYYSK 201


>gi|271962663|ref|YP_003336859.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
 gi|270505838|gb|ACZ84116.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
          Length = 208

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K+ RR    L+ + K       P+  R Y PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGADCKLCRREKTKLFLKGKKCESAKCPIEIRPYPPGEHGRGRPKESEYQ-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG I EK+FR+ ++EA+R  G T  NL+  LESRLD +VYRA F  +  AARQ
Sbjct: 60  KQKTRRIYG-ILEKQFRNYYEEANRKGGKTGENLLQILESRLDNVVYRAGFAESRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHD 173
            V H H+LVNG+ V+I SYR +E D++EV+++S+ L     A +   ++  P ++ V  +
Sbjct: 119 QVRHGHILVNGKKVDIPSYRVREHDIVEVRERSRNLLPYEVARATSGDKTFPAWLGVAPE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M     ++P   +       +Q  L+VE YS+
Sbjct: 179 AMRVLIHQLPVRQQ---IDTQVQEQLIVELYSK 208


>gi|300857808|ref|YP_003782791.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41]
 gi|300685262|gb|ADK28184.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41]
 gi|302205543|gb|ADL09885.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis C231]
 gi|302330098|gb|ADL20292.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis 1002]
 gi|308275779|gb|ADO25678.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis I19]
          Length = 201

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LE+RLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYAEANRLPGKTGDNLVILLEARLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ +N+ SY+  + D+I+V++KS+++    EA + L +  VP ++ V    +    
Sbjct: 118 FTVNGKKINVPSYKVSQYDIIDVREKSRKMIWFEEAQENLLDAVVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVEFYSK 201


>gi|166092841|gb|ABY82372.1| ribosomal protein S4 [Silene uniflora]
          Length = 201

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K +A +      +   +VP++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSIALIQNFIDSSPPEEVPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118627526|emb|CAL39397.1| small ribosomal protein 4 [Lophozia longiflora]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L  +  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|48527411|gb|AAT45838.1| small ribosomal protein 4 [Plagiochila retrospectans]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|331699146|ref|YP_004335385.1| 30S ribosomal protein S4 [Pseudonocardia dioxanivorans CB1190]
 gi|326953835|gb|AEA27532.1| ribosomal protein S4 [Pseudonocardia dioxanivorans CB1190]
          Length = 201

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQ++ KQK + 
Sbjct: 1   MARYTGPMTRKSRRLKVDLVGGDQ-AFERRPYPPGQHGRIRIKETEYL-LQMQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R  G T  NL+  LESRLD +VYRA    T   ARQ VNH H
Sbjct: 59  AYGVL-EKQFRRYYEEANRRPGKTGDNLLQILESRLDNVVYRAGLARTRRMARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG+ VNI SYR  + D+I+VK KS      + A + L +R +P ++ V   N+    
Sbjct: 118 FLVNGQKVNIPSYRVGQYDIIDVKPKSLGTDPFIIAKELLGDRPIPAWLQVVPSNLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +       +   L+VE YS+
Sbjct: 178 HQLPERAQ---IDTQVTEQLIVELYSK 201


>gi|118626013|emb|CAL39324.1| small ribosomal protein 4 [Diplophyllum albicans]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNNTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPNHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200


>gi|15612279|ref|NP_223932.1| 30S ribosomal protein S4 [Helicobacter pylori J99]
 gi|7388210|sp|Q9ZJT4|RS4_HELPJ RecName: Full=30S ribosomal protein S4
 gi|4155842|gb|AAD06816.1| 30S RIBOSOMAL PROTEIN S4 [Helicobacter pylori J99]
 gi|261840009|gb|ACX99774.1| 30S ribosomal protein S4 [Helicobacter pylori 52]
 gi|297380476|gb|ADI35363.1| ribosomal protein S4 [Helicobacter pylori v225d]
          Length = 208

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRTKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ ++I SY  + G  IE+K+K+K    V+ A +L A+  +  +I V  D
Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRAMELTAQTGIVPWIDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   V ++  L+VE YS+
Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208


>gi|118627524|emb|CAL39396.1| small ribosomal protein 4 [Crossocalyx hellerianus]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I V+ K +  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITVRNKQESQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|11497530|ref|NP_054938.1| ribosomal protein S4 [Spinacia oleracea]
 gi|133959|sp|P13788|RR4_SPIOL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|188036205|pdb|3BBN|D Chain D, Homology Model For The Spinach Chloroplast 30s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
 gi|7636111|emb|CAB88731.1| ribosomal protein S4 [Spinacia oleracea]
 gi|225464|prf||1303355A ribosomal protein S4
          Length = 201

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  + + K +A +  +  L+ R ++P+++++N        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIMARDEQKSIALIQNSLDLSPREELPKHLTLNPFPYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118626111|emb|CAL39355.1| small ribosomal protein 4 [Gymnocolea inflata]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G +     K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGASPGLTSKTLKLKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++   K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNGQKSQSIITKNINLFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 DQMVNR---EWVNLKINELLVVEYYSR 200


>gi|118626047|emb|CAL41748.1| small ribosomal protein 4 [Scapania obcordata]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN  +V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ILVNNDTVDIPSYNCEPGDIITIKNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWINLKINELLVVEYYSR 200


>gi|109946782|ref|YP_664010.1| 30S ribosomal protein S4 [Helicobacter acinonychis str. Sheeba]
 gi|188528082|ref|YP_001910769.1| 30S ribosomal protein S4 [Helicobacter pylori Shi470]
 gi|207092545|ref|ZP_03240332.1| 30S ribosomal protein S4 [Helicobacter pylori HPKX_438_AG0C1]
 gi|208435192|ref|YP_002266858.1| ribosomal protein S4 [Helicobacter pylori G27]
 gi|210135453|ref|YP_002301892.1| 30S ribosomal protein S4 [Helicobacter pylori P12]
 gi|217033613|ref|ZP_03439041.1| hypothetical protein HP9810_899g49 [Helicobacter pylori 98-10]
 gi|254779836|ref|YP_003057942.1| 30S ribosomal protein S4 [Helicobacter pylori B38]
 gi|308183404|ref|YP_003927531.1| 30S ribosomal protein S4 [Helicobacter pylori PeCan4]
 gi|308185046|ref|YP_003929179.1| 30S ribosomal protein S4 [Helicobacter pylori SJM180]
 gi|123362789|sp|Q17ZB5|RS4_HELAH RecName: Full=30S ribosomal protein S4
 gi|226699072|sp|B6JND4|RS4_HELP2 RecName: Full=30S ribosomal protein S4
 gi|226699073|sp|B5Z8U3|RS4_HELPG RecName: Full=30S ribosomal protein S4
 gi|226699074|sp|B2UV57|RS4_HELPS RecName: Full=30S ribosomal protein S4
 gi|109714003|emb|CAJ99011.1| 30S ribosomal protein S4 [Helicobacter acinonychis str. Sheeba]
 gi|188144322|gb|ACD48739.1| 30S ribosomal protein S4 [Helicobacter pylori Shi470]
 gi|208433121|gb|ACI27992.1| ribosomal protein S4 [Helicobacter pylori G27]
 gi|210133421|gb|ACJ08412.1| 30S ribosomal protein S4 [Helicobacter pylori P12]
 gi|216943959|gb|EEC23393.1| hypothetical protein HP9810_899g49 [Helicobacter pylori 98-10]
 gi|254001748|emb|CAX29979.1| 30S ribosomal subunit protein S4 [Helicobacter pylori B38]
 gi|308060966|gb|ADO02862.1| 30S ribosomal protein S4 [Helicobacter pylori SJM180]
 gi|308062579|gb|ADO04467.1| 30S ribosomal protein S4 [Helicobacter pylori Cuz20]
 gi|308064071|gb|ADO05958.1| 30S ribosomal protein S4 [Helicobacter pylori Sat464]
 gi|308065589|gb|ADO07481.1| 30S ribosomal protein S4 [Helicobacter pylori PeCan4]
 gi|317009977|gb|ADU80557.1| 30S ribosomal protein S4 [Helicobacter pylori India7]
 gi|317011494|gb|ADU85241.1| 30S ribosomal protein S4 [Helicobacter pylori SouthAfrica7]
 gi|317013081|gb|ADU83689.1| 30S ribosomal protein S4 [Helicobacter pylori Lithuania75]
 gi|317014685|gb|ADU82121.1| 30S ribosomal protein S4 [Helicobacter pylori Gambia94/24]
 gi|317178033|dbj|BAJ55822.1| 30S ribosomal protein S4 [Helicobacter pylori F16]
 gi|317178415|dbj|BAJ56203.1| 30S ribosomal protein S4 [Helicobacter pylori F30]
 gi|317182540|dbj|BAJ60324.1| 30S ribosomal protein S4 [Helicobacter pylori F57]
          Length = 208

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ ++I SY  + G  IE+K+K+K    V+ A +L A+  +  +I V  D
Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRAMELTAQTGIVPWIDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   V ++  L+VE YS+
Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208


>gi|108563664|ref|YP_627980.1| 30S ribosomal protein S4 [Helicobacter pylori HPAG1]
 gi|122980453|sp|Q1CRW6|RS4_HELPH RecName: Full=30S ribosomal protein S4
 gi|107837437|gb|ABF85306.1| ribosomal protein S4 [Helicobacter pylori HPAG1]
          Length = 208

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ ++I SY  + G  IE+K+K+K    V+ A++L A+  +  +I V  D
Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRATELTAQTGIVPWIDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   V ++  L+VE YS+
Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208


>gi|118626011|emb|CAL39323.1| small ribosomal protein 4 [Gymnocolea inflata]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKLKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++   K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNGQKSQSIITKNINLFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 DQMVNR---EWVNLKINELLVVEYYSR 200


>gi|283953794|ref|ZP_06371325.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 414]
 gi|283794835|gb|EFC33573.1| 30S ribosomal protein S4 [Campylobacter jejuni subsp. jejuni 414]
          Length = 208

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K++RR G +L  +       KS ++ R Y PG HG  RK K S +GLQLR 
Sbjct: 1   MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGA-RKGKISEYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FR +F EA R  G+T   LI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKFMYG-VSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDNVVYRMGFATTRRFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ V+I S+R K G  IE+ +KSK    +  A +L A+  +  ++ V  D
Sbjct: 119 LVTHGHVLVDGKRVDIPSFRVKAGAKIEIIEKSKNNPQITRAIELTAQTGIVAWVDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++   +VE YS+
Sbjct: 179 KRFGIFTRKPEREEVV---IPVEERFIVELYSK 208


>gi|116515235|ref|YP_802864.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285369|sp|Q057C8|RS4_BUCCC RecName: Full=30S ribosomal protein S4
 gi|58384668|gb|AAW72683.1| ribosomal protein S4 [Buchnera aphidicola (Cinara cedri)]
 gi|116257089|gb|ABJ90771.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 206

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR   +L+ +     + ++      PG HG  RK + S +  QLR KQ
Sbjct: 1   MAKYLGPKLKLCRRENSDLFLKSGVRTIESKCNIDQAPGQHG-SRKLRLSEYAKQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I EK+F + +K+A + +G+T  NL+  LESRLD IVYR  F  T   ARQ +
Sbjct: 60  KLRRLYG-ILEKQFHNYYKKASKLKGNTGQNLLFLLESRLDNIVYRLGFGTTRLEARQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           NH+ + VN + V+  S++    D I V +KSK    +  + + + +++ P ++S+++ NM
Sbjct: 119 NHKSICVNNKIVSFPSFQVSIDDKISVVKKSKNQLRIKASLEIMKQKEKPSWLSIDYPNM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F+R             +  +L++E YS+
Sbjct: 179 EGVFLRSIERDD---LSSDINEHLIIELYSK 206


>gi|262203541|ref|YP_003274749.1| 30S ribosomal protein S4 [Gordonia bronchialis DSM 43247]
 gi|262086888|gb|ACY22856.1| ribosomal protein S4 [Gordonia bronchialis DSM 43247]
          Length = 201

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G  +     R Y PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPATKKSRRLRVDLIGGDQ-AFERRPYPPGQHGRSRIKESEYL-QQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA+R  G T   L+  LE+RLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYGVL-EKQFRRYYEEANRRNGKTGDELLRILETRLDNVVYRAGLARTRRQARQMVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
             VNG  V++ SYR  + D+I+V+ KS Q      A ++  +R VP ++ V    +    
Sbjct: 118 FTVNGVKVDVPSYRVGQYDIIDVRPKSLQTVPFQIAKEIQGDRPVPGWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +     V +   L+VEFYS+
Sbjct: 178 HNVPERAQ---IDVPLTEQLIVEFYSK 201


>gi|118627506|emb|CAL39387.1| small ribosomal protein 4 [Isopaches bicrenatus]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIKNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|166092852|gb|ABY82379.1| ribosomal protein S4 [Silene conica]
          Length = 201

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      A   +VP++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSAPPEEVPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118626041|emb|CAL39332.1| small ribosomal protein 4 [Scapania undulata]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I +  K K  + + +   L ++  +P +++ +   +    
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIGNKQKSQSIITKNLNLFQKLKIPSHLTFDLAQLQGYV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWINLKINELLVVEYYSR 200


>gi|118627536|emb|CAL39401.1| small ribosomal protein 4 [Tetralophozia setiformis]
          Length = 202

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L  +  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFXKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|297621787|ref|YP_003709924.1| 30S ribosomal protein S4 [Waddlia chondrophila WSU 86-1044]
 gi|297377088|gb|ADI38918.1| 30S ribosomal protein S4 [Waddlia chondrophila WSU 86-1044]
          Length = 206

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 79/196 (40%), Positives = 131/196 (66%), Gaps = 2/196 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   ++++I RR G N++GR ++P+  +   PG+HG RR+ K S +GLQL  KQK+K 
Sbjct: 1   MARYTGNRNRIARRFGVNIFGRARNPLIHKPNPPGVHGARRR-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+  + +K+A + +G+T  +L   LE RLD +VYR K   TIFAA Q V+H H
Sbjct: 60  VYGMISEKQLVNYYKKALKLKGNTPLHLAEMLECRLDNVVYRLKLASTIFAAHQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I S++ K G V+ VK++S+++ +V EA   + +DVPEY S++ +      +
Sbjct: 120 ILVDGKKVDIRSFQVKPGMVVSVKERSQKMKAVNEALDNSMKDVPEYFSLDRNKFSGQLL 179

Query: 181 RIPSSLKDVPYPVIMQ 196
            +P+ L+ +P+P+ + 
Sbjct: 180 SMPT-LEQIPWPLEIN 194


>gi|296268580|ref|YP_003651212.1| 30S ribosomal protein S4 [Thermobispora bispora DSM 43833]
 gi|296091367|gb|ADG87319.1| ribosomal protein S4 [Thermobispora bispora DSM 43833]
          Length = 208

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR    L+ + K       P+  R Y PG HG+ R  +  Y  LQLR 
Sbjct: 1   MARYTGPDCKLCRREKTKLFLKGKKCESAKCPIEIRPYPPGEHGRGRPKESEYQ-LQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK ++ YG + EK+F   ++EA R  G T  NL+  LESRLD +VYRA F  +  AARQ
Sbjct: 60  KQKTRRIYGVL-EKQFHRYYEEASRRPGKTGENLLQILESRLDNVVYRAGFAESRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H H LVNGR VNI SYR +E DVIEV++  + L     A    +E+ +P ++ V+ +
Sbjct: 119 QVRHGHFLVNGRKVNIPSYRVREHDVIEVRENKRHLMPYEVARATHSEKKIPAWLGVSTE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +M     ++P+  +      ++Q  L+VE YS+
Sbjct: 179 HMRILVHQLPTRQQ---IDTLVQEQLIVELYSK 208


>gi|118626095|emb|CAL39349.1| small ribosomal protein 4 [Barbilophozia barbata]
          Length = 202

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I V+ + K  + + +   L ++  +P +++     +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITVRGRQKSQSIITQNINLFQKLKIPSHLTFELAQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200


>gi|118626157|emb|CAL39376.1| small ribosomal protein 4 [Barbilophozia attenuata]
          Length = 202

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+ FLE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + V +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRSKQKSQSIVTKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|108802645|ref|YP_636301.1| ribosomal protein S4 [Eucalyptus globulus subsp. globulus]
 gi|309322451|ref|YP_003933964.1| ribosomal protein S4 [Eucalyptus grandis]
 gi|90101659|sp|Q49KZ6|RR4_EUCGG RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|60460811|gb|AAX21031.1| ribosomal protein S4 [Eucalyptus globulus subsp. globulus]
 gi|308223285|gb|ADO23593.1| ribosomal protein S4 [Eucalyptus grandis]
          Length = 201

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  +   K  A +      +   +VP++++++        
Sbjct: 116 ILVNGCIVDIPSYRCKPRDIITARDDQKSRAMIQNYFDSSPHEEVPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|118626043|emb|CAL41746.1| small ribosomal protein 4 [Lophozia ventricosa var. confertifolia]
 gi|118627540|emb|CAL39403.1| small ribosomal protein 4 [Lophozia ventricosa var. ventricosa]
          Length = 202

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L  +  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|111220573|ref|YP_711367.1| 30S ribosomal protein S4 [Frankia alni ACN14a]
 gi|123339013|sp|Q0RRP4|RS4_FRAAA RecName: Full=30S ribosomal protein S4
 gi|111148105|emb|CAJ59773.1| 30S ribosomal subunit protein S4 [Frankia alni ACN14a]
          Length = 209

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR    L+ +      PK P+  R Y PG HG+ R     Y  LQ R 
Sbjct: 1   MARYTGADCKRCRREKTKLFLKGSKCDTPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG I EK+FR  + EA+R  G T   L+  LESRLD +VYR  F P+  AARQ
Sbjct: 60  KQKCARIYG-ILEKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172
            V H HV VNGR V+I SYR  E D++E+  K+++L   + A + A   R VP ++    
Sbjct: 119 AVRHGHVQVNGRKVDIPSYRISENDIVEIAPKARELTPFIVARETAGQGRAVPAWLESIP 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M      +P+          +Q  L+VE YS+
Sbjct: 179 SQMRILVHSLPARQ---VIDTQVQEQLIVELYSK 209


>gi|289065091|ref|YP_003433977.1| ribosomal protein S4 [Typha latifolia]
 gi|69216110|gb|AAZ03893.1| ribosomal protein S4 [Typha latifolia]
 gi|281371774|gb|ADA63701.1| ribosomal protein S4 [Typha latifolia]
          Length = 201

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K   K    +  +    A  ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDNQKSKGLIQNSIASAAHEELPKHLTIDSFQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|122893992|ref|YP_001004188.1| ribosomal protein S4 [Ranunculus macranthus]
 gi|69216108|gb|AAZ03892.1| ribosomal protein S4 [Ranunculus macranthus]
 gi|85540806|gb|ABC70758.1| ribosomal protein S4 [Ranunculus macranthus]
          Length = 201

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    + G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRPGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P++++++      + 
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNFMDSSPHEELPKHLTLHPSQYKGSV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118627532|emb|CAL39399.1| small ribosomal protein 4 [Lophozia ventricosa var. confusa]
          Length = 202

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L  +  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLXINELLVVEYYSR 200


>gi|118627514|emb|CAL39391.1| small ribosomal protein 4 [Lophozia obtusa]
          Length = 202

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKXIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|161784194|ref|YP_001595510.1| ribosomal protein S4 [Lemna minor]
 gi|88696772|gb|ABD48497.1| ribosomal protein S4 [Lemna minor]
          Length = 201

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K   +  A +          +VP++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDIISTKDNQRSKALIQNNMTSSPPEEVPKHLTLDSIQSKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|326792579|ref|YP_004310400.1| ribosomal protein S4 [Clostridium lentocellum DSM 5427]
 gi|326543343|gb|ADZ85202.1| ribosomal protein S4 [Clostridium lentocellum DSM 5427]
          Length = 208

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 116/213 (54%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   SK K  RR G+ L+ + +        V  R Y PG HGQ +K    Y GLQLR 
Sbjct: 1   MARYIGSKCKQCRREGKKLFLKGERCFSAACSVEKRPYAPGQHGQAKKKLSEY-GLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + E KFR+ F+EADR +G T  NL+  LE RLD + YR     +   ARQ
Sbjct: 60  KQKAKRIYGVL-EGKFRTYFEEADRKQGITGENLLRLLELRLDNVCYRIGLGRSRTEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            V H  + VNG+ VNI SY+ K GDVIEVK+ +K        ++    R VPE++  + +
Sbjct: 119 VVRHNLITVNGKRVNIPSYQVKVGDVIEVKEDAKSFERFKLTAEVTGSRIVPEWLEGDIE 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+  T   +P+  +       +   L+VE YS+
Sbjct: 179 NLRGTVKALPTREQ---IDTDIAETLIVELYSK 208


>gi|304316319|ref|YP_003851464.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777821|gb|ADL68380.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 198

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 86/204 (42%), Positives = 125/204 (61%), Gaps = 6/204 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    KH++ R +G  L G PK P   R Y PG HG  R  K S +G +L  KQK+K 
Sbjct: 1   MARTIVPKHRMCRIVGHPLCGSPKCPSLKRPYAPGQHGLARGKKLSEYGRRLLEKQKLKS 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ E+++R  F++A +S+  TS  L+S LE RLD IVYR  F PTI++ARQ V+H H
Sbjct: 61  IY-NVKERQYRRYFEKALKSKEPTSEKLLSLLERRLDNIVYRMGFAPTIYSARQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ VNI SY    GDV+ VK+KSK +  + ++      D+P YI+V+ D M    +
Sbjct: 120 ILVNGKKVNIPSYEVNVGDVVSVKEKSKNMPLIKQSI--GTNDIPPYINVDVDKMEGKLI 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           ++P   +    PV +  +L+VEFY
Sbjct: 178 KLPRRSE---IPVEIDDHLLVEFY 198


>gi|145294734|ref|YP_001137555.1| 30S ribosomal protein S4 [Corynebacterium glutamicum R]
 gi|172044394|sp|A4QBQ6|RS4_CORGB RecName: Full=30S ribosomal protein S4
 gi|140844654|dbj|BAF53653.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 201

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  IYG-VMEKQFRRYYAEANRRAGKTGENLVVLLESRLDNVVYRAGLANTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+++++ S+R  + D+I V++KS+++    EA   L +  VP ++ V  +N+    
Sbjct: 118 FTVNGKAIDVPSFRVSQYDIINVREKSQKMNWFEEAQDNLVDAVVPAWLQVVPENLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201


>gi|118626097|emb|CAL39350.1| small ribosomal protein 4 [Jamesoniella colorata]
          Length = 202

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  YYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD I ++ K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISINNGIVDIPSYNCEPGDTITIRNKQKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200


>gi|15645907|ref|NP_208086.1| 30S ribosomal protein S4 [Helicobacter pylori 26695]
 gi|217032048|ref|ZP_03437548.1| hypothetical protein HPB128_16g8 [Helicobacter pylori B128]
 gi|298735681|ref|YP_003728206.1| 30S ribosomal protein S4 [Helicobacter pylori B8]
 gi|2500400|sp|P56011|RS4_HELPY RecName: Full=30S ribosomal protein S4
 gi|2314460|gb|AAD08337.1| ribosomal protein S4 (rps4) [Helicobacter pylori 26695]
 gi|216946196|gb|EEC24804.1| hypothetical protein HPB128_16g8 [Helicobacter pylori B128]
 gi|298354870|emb|CBI65742.1| small subunit ribosomal protein S4 [Helicobacter pylori B8]
 gi|307637965|gb|ADN80415.1| SSU ribosomal protein S4p:S9e [Helicobacter pylori 908]
 gi|325996570|gb|ADZ51975.1| 30S ribosomal protein S4 [Helicobacter pylori 2018]
 gi|325998160|gb|ADZ50368.1| 30S ribosomal protein S4 [Helicobacter pylori 2017]
          Length = 208

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ ++I SY  + G  IE+K+K+K  + V+ A +L A+  +  +I V  D
Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNSQVVRAMELTAQTGIVPWIDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   V ++  L+VE YS+
Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208


>gi|118626137|emb|CAL39366.1| small ribosomal protein 4 [Leiocolea heterocolpos]
 gi|118626143|emb|CAL39369.1| small ribosomal protein 4 [Leiocolea heterocolpos]
 gi|118626155|emb|CAL39375.1| small ribosomal protein 4 [Leiocolea heterocolpos]
          Length = 202

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCESGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200


>gi|315587183|gb|ADU41564.1| 30S ribosomal protein S4 [Helicobacter pylori 35A]
          Length = 208

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ ++I SY  + G  IE+K+K+K    V+ A +L A+  +  +I V  D
Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKNNPQVVRAMELTAQTGIAPWIDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   V ++  L+VE YS+
Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208


>gi|313183824|ref|YP_004021667.1| ribosomal protein S4 [Prunus persica]
 gi|309321436|gb|ADO64977.1| ribosomal protein S4 [Prunus persica]
          Length = 201

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I V+ + K  A +        R ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKTRDIITVRDEQKSRALIQNYLDSPPREELPKHLTLHPFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|323148908|ref|YP_004222463.1| ribosomal protein S4 [Smilax china]
 gi|308742599|gb|ADO33450.1| ribosomal protein S4 [Smilax china]
          Length = 201

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KSGSDLKNQLRSRKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + +  A +      + R ++P++++++        
Sbjct: 116 ILVNGRVVDIPSYRCKPQDIITPKDEQRSKALIQNYIASSPREELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|169630850|ref|YP_001704499.1| 30S ribosomal protein S4 [Mycobacterium abscessus ATCC 19977]
 gi|226699092|sp|B1MGA0|RS4_MYCA9 RecName: Full=30S ribosomal protein S4
 gi|169242817|emb|CAM63845.1| 30S ribosomal protein S4 [Mycobacterium abscessus]
          Length = 201

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G   S    R Y PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLGVDLVG-GSSAYEKRPYPPGQHGRARIKESEYR-QQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA RS G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYAEAVRSSGKTGEQLLQILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VN   V++ SYR  + D+I++K KS        A + A ER +P ++ V  +      
Sbjct: 118 FTVNNVKVDVPSYRVSQYDIIDIKPKSLNTLPFEVARETAGERPIPGWLQVVGERQRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VEFYS+
Sbjct: 178 HQLPERAQ---IDVPLAEQLIVEFYSK 201


>gi|283794970|ref|YP_003359361.1| ribosomal protein S4 [Olea europaea]
 gi|330850745|ref|YP_004376423.1| ribosomal protein S4 [Olea europaea subsp. europaea]
 gi|281428689|gb|ADA69928.1| ribosomal protein S4 [Olea europaea]
 gi|291059255|gb|ADD72091.1| ribosomal protein S4 [Olea europaea]
 gi|328795435|emb|CBR30317.1| ribosomal protein S4 [Olea europaea subsp. europaea]
          Length = 201

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K    +  +   +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|110456606|gb|ABG74733.1| ribosomal protein S4 [Forsythia europaea]
          Length = 201

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K    +  +   +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIIMAKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118616624|ref|YP_904956.1| 30S ribosomal protein S4 [Mycobacterium ulcerans Agy99]
 gi|152112235|sp|A0PMB6|RS4_MYCUA RecName: Full=30S ribosomal protein S4
 gi|118568734|gb|ABL03485.1| 30S ribosomal protein S4, RpsD [Mycobacterium ulcerans Agy99]
          Length = 201

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+G +L G  +S    R Y PG HG+ R     Y   QL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLGTDLVGGDQS-FEKRPYPPGQHGRARIKDSEYR-QQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRHSGKTGEELLKILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+I+V+  S        A + A +R +P ++ V         
Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDNSLNTVPFQIARETAGDRPIPSWLQVVGGRQRILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE+YS+
Sbjct: 178 HQLPERAQ---IEVPLTEQLIVEYYSK 201


>gi|261838613|gb|ACX98379.1| ribosomal protein S4 [Helicobacter pylori 51]
          Length = 208

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ ++I SY  + G  IE+K+K+K    V+ A +L A+  +  +I V  D
Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKNNPQVVRAMELTAQTGIVPWIDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   V ++  L+VE YS+
Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208


>gi|118625993|emb|CAL39318.1| small ribosomal protein 4 [Lophocolea concreta]
          Length = 202

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI AARQ VNH H
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNYIVDIPSYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|226305369|ref|YP_002765327.1| 30S ribosomal protein S4 [Rhodococcus erythropolis PR4]
 gi|229489412|ref|ZP_04383275.1| ribosomal protein S4 [Rhodococcus erythropolis SK121]
 gi|259495289|sp|C0ZW53|RS4_RHOE4 RecName: Full=30S ribosomal protein S4
 gi|226184484|dbj|BAH32588.1| 30S ribosomal protein S4 [Rhodococcus erythropolis PR4]
 gi|229323509|gb|EEN89267.1| ribosomal protein S4 [Rhodococcus erythropolis SK121]
          Length = 201

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +KEA+   G T  NL+  LESRLD +VYRA    T   ARQ V H H
Sbjct: 59  TYG-VMEKQFRLYYKEANNRPGKTGENLLRILESRLDNVVYRAGLARTRRQARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           +LVN + V+I SYR  + D+I+VK+KS        A +   +R VP ++ V    +    
Sbjct: 118 LLVNNKKVDIPSYRVSQYDIIDVKEKSLSTLPFQVARETVGDRPVPGWLQVVGSRLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VE+YS+
Sbjct: 178 HQLPERAQ---IDIALQEQLIVEYYSK 201


>gi|118626145|emb|CAL39370.1| small ribosomal protein 4 [Barbilophozia hatcheri]
          Length = 202

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++     +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRSKQKSQSIITQNINLFQKLKIPSHLTFELAQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|169335656|ref|ZP_02862849.1| hypothetical protein ANASTE_02076 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258394|gb|EDS72360.1| hypothetical protein ANASTE_02076 [Anaerofustis stercorihominis DSM
           17244]
          Length = 208

 Score =  192 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR  E L+ +       K   N R   PG HG  + SK S +G+QLR 
Sbjct: 1   MARYTEASCRLCRRENEKLFLKGSRCYSDKCAFNRRPTAPGQHG-SKGSKMSEYGVQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR  F +A+R  G    NLIS LESRLD +VYR  F  +   ARQ
Sbjct: 60  KQKVKRIYGVL-EKQFRLYFDKAERKPGAAGENLISLLESRLDNVVYRMGFASSRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP-EYISVNHD 173
            V H H LV+G+ VNI S+  KEG VI+VK  S++ +   E +++ E  VP  Y  V+ +
Sbjct: 119 LVRHNHFLVDGKKVNIPSFSVKEGQVIKVKDDSRKSSKFKEIAEMNETKVPAAYTQVDME 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M    +  P+        + ++ +L+VE YS+
Sbjct: 179 KMEGKMIAAPTKAD---IEIPIEDHLIVELYSK 208


>gi|25027127|ref|NP_737181.1| 30S ribosomal protein S4 [Corynebacterium efficiens YS-314]
 gi|41017843|sp|Q8FS34|RS4_COREF RecName: Full=30S ribosomal protein S4
 gi|23492407|dbj|BAC17381.1| putative 30S ribosomal protein S4 [Corynebacterium efficiens
           YS-314]
          Length = 201

 Score =  192 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVG-GDMAFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA+R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  IYG-VMEKQFRRYYAEANRRPGKTGENLVVMLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            +VNG++V++ S+R  + D+I+V++KS+++    EA   L +  VP ++ V    +    
Sbjct: 118 FVVNGKAVDVPSFRVSQYDIIDVREKSQKMNWFEEAQDNLVDAIVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     + +Q  L+VEFYS+
Sbjct: 178 HQLPERAQ---IDIPLQEQLIVEFYSK 201


>gi|118626071|emb|CAL39339.1| small ribosomal protein 4 [Anastrophyllum cavifolium]
 gi|118626167|emb|CAL39381.1| small ribosomal protein 4 [Barbilophozia atlantica]
 gi|118626169|emb|CAL39382.1| small ribosomal protein 4 [Barbilophozia atlantica]
          Length = 202

 Score =  192 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ + K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNRHKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|166092835|gb|ABY82368.1| ribosomal protein S4 [Silene samia]
 gi|166092855|gb|ABY82381.1| ribosomal protein S4 [Silene latifolia]
          Length = 201

 Score =  192 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   +VP++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEEVPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|296936673|gb|ADH94345.1| ribosomal protein S4 [Syzygium cumini]
          Length = 201

 Score =  192 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  +   K    +      +   +VP++++++        
Sbjct: 116 ILVNGCIVDIPSYRCKPRDIITARDDQKSRTMIQNYFDSSPHEEVPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|118626153|emb|CAL39374.1| small ribosomal protein 4 [Saccobasis polita]
 gi|118627548|emb|CAL39407.1| small ribosomal protein 4 [Saccobasis polita]
          Length = 202

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIKNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|157689454|gb|ABV65283.1| ribosomal protein S4 [Cornus florida]
          Length = 201

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +  + + +   ++P++++V+        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITARDEQKSRALIQNSLESSPHEELPKHLTVHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|156598368|gb|ABU85444.1| ribosomal protein S4 [Musa acuminata]
          Length = 201

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +     L+   ++P++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIALSPPEELPKHLTFDSFQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIDLKINELLVVEYYSR 199


>gi|166092872|gb|ABY82392.1| ribosomal protein S4 [Silene schafta]
          Length = 201

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +  D +P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFLDSSPPDELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118625981|emb|CAL39312.1| small ribosomal protein 4 [Syzygiella setulosa]
          Length = 202

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY CK GD I ++ K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISINNGIVDIPSYNCKPGDAITIRNKEKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200


>gi|114329970|ref|YP_740652.1| ribosomal protein S4 [Nandina domestica]
 gi|122165959|sp|Q09FV9|RR4_NANDO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|114054472|gb|ABI49865.1| ribosomal protein S4 [Nandina domestica]
          Length = 201

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    + G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|290487060|gb|ADD29914.1| ribosomal protein S4 [Antirrhinum majus]
          Length = 201

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K    +  +   +   +VP Y++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRTLIQNSLNSSPHEEVPNYLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118626139|emb|CAL39367.1| small ribosomal protein 4 [Tritomaria quinquedentata subsp.
           quinquedentata]
 gi|118626151|emb|CAL39373.1| small ribosomal protein 4 [Tritomaria quinquedentata subsp.
           turgida]
          Length = 202

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|118625963|emb|CAL39303.1| small ribosomal protein 4 [Syzygiella rubricaulis]
          Length = 202

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  +YR    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIYRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY CK GD I +K K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISINNSIVDIPSYNCKPGDTITIKNKEKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200


>gi|118625975|emb|CAL39309.1| small ribosomal protein 4 [Anastrophyllum minutum]
 gi|118626005|emb|CAL39320.1| small ribosomal protein 4 [Anastrophyllum minutum]
 gi|118626121|emb|CAL39360.1| small ribosomal protein 4 [Anastrophyllum minutum]
          Length = 202

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|213964948|ref|ZP_03393147.1| ribosomal protein S4 [Corynebacterium amycolatum SK46]
 gi|213952484|gb|EEB63867.1| ribosomal protein S4 [Corynebacterium amycolatum SK46]
          Length = 201

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G        R Y PG  G+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPATRKSRRLRVDLVG-GDMNFERRPYPPGQAGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA R  G T  NL+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYAEAHRRPGKTGDNLVVLLESRLDNVVYRAGLARTRRQARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ +N+ S++  + D+I+V+ KS+++    EA + L +  VP ++ V  +++    
Sbjct: 118 FTVNGKKINVPSFQVSQYDIIDVRPKSQKMIWFEEAQENLVDAVVPAWLQVVPESLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + P   +     + +Q  L+VEFYS+
Sbjct: 178 HQTPERAQ---IDIPLQEQLIVEFYSK 201


>gi|118627534|emb|CAL39400.1| small ribosomal protein 4 [Jungermannia exsertifolia]
          Length = 202

 Score =  191 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I VK K K  + + +   L  E  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCELGDIITVKNKQKSQSIITKNINLFQESKIPSHLTFDSTKLQGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKVNELLVVEYYSR 200


>gi|48527359|gb|AAT45812.1| small ribosomal protein 4 [Plagiochila bantamensis]
          Length = 202

 Score =  191 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  + R    PT+  ARQ VNH H
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ + K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNEQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +   LVVE+YSR
Sbjct: 177 NQMIDR---EWINLQINELLVVEYYSR 200


>gi|183217743|ref|YP_001837362.1| ribosomal protein S4 [Guizotia abyssinica]
 gi|179366258|gb|ACB86529.1| ribosomal protein S4 [Guizotia abyssinica]
          Length = 201

 Score =  191 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  + + K  A +  +   +   ++P ++++         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|7525035|ref|NP_051061.1| ribosomal protein S4 [Arabidopsis thaliana]
 gi|6685914|sp|P56799|RR4_ARATH RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|5881696|dbj|BAA84387.1| ribosomal protein S4 [Arabidopsis thaliana]
          Length = 201

 Score =  191 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTEHQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|41323125|gb|AAR99792.1| small ribosomal protein 4 [Plagiochila subplana]
          Length = 202

 Score =  191 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  + R    PTI  ARQ VNH H
Sbjct: 58  HYG-LTEQQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GDVI V  K K  + V +     ++  +P +++ N   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDVITVGNKQKSQSIVTKNINSFQKLKIPSHLTFNLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200


>gi|48527351|gb|AAT45808.1| small ribosomal protein 4 [Plagiochila alternans]
          Length = 202

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  +++ +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200


>gi|158317765|ref|YP_001510273.1| RNA-binding S4 domain-containing protein [Frankia sp. EAN1pec]
 gi|158113170|gb|ABW15367.1| RNA-binding S4 domain protein [Frankia sp. EAN1pec]
          Length = 209

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 111/214 (51%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR    L+ +      PK P+  R Y PG HG+ R     Y  LQ R 
Sbjct: 1   MARYTGADCKRCRREKTKLFLKGSKCETPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG I EK+FR  + EA+R  G T   L+  LESRLD +VYR  F P+  AARQ
Sbjct: 60  KQKCARIYG-ILEKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172
            V H HV VNGR V+I SYR  E D++E+  KS++L   + A + A   R VP +I    
Sbjct: 119 AVRHGHVQVNGRKVDIPSYRVTENDIVEIAPKSRELTPFIVARETAGTGRTVPPWIEAIP 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M      +P+          +Q  L+VE YS+
Sbjct: 179 SQMRLLVHSLPARQ---VIDTQVQEQLIVELYSK 209


>gi|164597809|ref|NP_084669.2| ribosomal protein S4 [Oenothera elata subsp. hookeri]
 gi|169142699|ref|YP_001687126.1| ribosomal protein S4 [Oenothera argillicola]
 gi|169142849|ref|YP_001687272.1| ribosomal protein S4 [Oenothera glazioviana]
 gi|169142934|ref|YP_001687356.1| ribosomal protein S4 [Oenothera biennis]
 gi|169143020|ref|YP_001687440.1| ribosomal protein S4 [Oenothera parviflora]
 gi|172045788|sp|Q9MTP1|RR4_OENEH RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|159792937|gb|ABW98693.1| ribosomal protein S4 [Oenothera argillicola]
 gi|159793107|gb|ABW98861.1| ribosomal protein S4 [Oenothera biennis]
 gi|159895461|gb|ABX10026.1| ribosomal protein S4 [Oenothera glazioviana]
 gi|159895546|gb|ABX10110.1| ribosomal protein S4 [Oenothera parviflora]
 gi|162423676|emb|CAB67134.2| ribosomal protein S4 [Oenothera elata subsp. hookeri]
          Length = 203

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q      S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDPRNQELSGNKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K   K  A +  + +     +VP++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDDQKSKAMIQNSLESPPHEEVPKHLTFHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDS---EWVGLKINELLVVEYYSR 199


>gi|28261719|ref|NP_783234.1| ribosomal protein S4 [Atropa belladonna]
 gi|26399142|sp|Q8S8X2|RR4_ATRBE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|20068333|emb|CAC88046.1| ribosomal protein S4 [Atropa belladonna]
          Length = 201

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K  A +  +   +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQISLDSSPHEELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|114329748|ref|YP_740567.1| ribosomal protein S4 [Platanus occidentalis]
 gi|122166033|sp|Q09G44|RR4_PLAOC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|114054386|gb|ABI49780.1| ribosomal protein S4 [Platanus occidentalis]
          Length = 201

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KSP      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKSP----KAGSDLRNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSSHEELPKHLTLHSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLQINELLVVEYYSR 199


>gi|89280637|ref|YP_514854.1| ribosomal protein S4 [Solanum lycopersicum]
 gi|91208990|ref|YP_538850.1| ribosomal protein S4 [Solanum bulbocastanum]
 gi|108773132|ref|YP_635641.1| ribosomal protein S4 [Solanum tuberosum]
 gi|90101662|sp|Q2MI98|RR4_SOLLC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|90101667|sp|Q2MII5|RR4_SOLBU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|90101668|sp|Q2VEH5|RR4_SOLTU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|82754629|gb|ABB90043.1| ribosomal protein S4 [Solanum tuberosum]
 gi|84371897|gb|ABC56215.1| ribosomal protein S4 [Solanum bulbocastanum]
 gi|84371985|gb|ABC56302.1| ribosomal protein S4 [Solanum lycopersicum]
 gi|88656806|gb|ABD47059.1| ribosomal protein S4 [Solanum tuberosum]
 gi|89241673|emb|CAJ32395.1| ribosomal protein S4 [Solanum lycopersicum]
          Length = 201

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K + K  A +  +   +   ++P ++++         
Sbjct: 116 ILVNGHIVDIPSYRCKPRDIITAKDEQKSRALIQISLDSSPHEELPNHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|94502493|ref|YP_588119.1| ribosomal protein S4 [Helianthus annuus]
 gi|122179576|sp|Q1KXV7|RR4_HELAN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|88656897|gb|ABD47148.1| ribosomal protein S4 [Helianthus annuus]
          Length = 201

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  + + K  A +  +   +   ++P ++++         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSRALIQNSLDSSPPEELPNHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|81301567|ref|YP_398864.1| ribosomal protein S4 [Nicotiana tomentosiformis]
 gi|90101664|sp|Q33C33|RR4_NICTO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|80750926|dbj|BAE48002.1| ribosomal protein S4 [Nicotiana tomentosiformis]
          Length = 201

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K  A +  +   +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSKALIQISLDSSPHEELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|254819220|ref|ZP_05224221.1| 30S ribosomal protein S4 [Mycobacterium intracellulare ATCC 13950]
          Length = 201

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+I+V+  S        A + A +R +P ++ V  +      
Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDSSLNTVPFQIARETAGDRPIPSWLQVVGERQRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VEFYS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEFYSK 201


>gi|118627516|emb|CAL39392.1| small ribosomal protein 4 [Anastrophyllum saxicola]
          Length = 202

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNNTVDISSYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|312977626|ref|ZP_07789373.1| LOW QUALITY PROTEIN: ribosomal protein S4 [Lactobacillus crispatus
           CTV-05]
 gi|310895365|gb|EFQ44432.1| LOW QUALITY PROTEIN: ribosomal protein S4 [Lactobacillus crispatus
           CTV-05]
          Length = 203

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 7/201 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  ++ R+Y PG HG   + + S +G QL  KQK++ 
Sbjct: 1   MSRYTGPSWKRSRRLGISLSGTGKE-ISRRNYAPGQHGPNNRGRLSEYGQQLHEKQKLRW 59

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++FR++F  A + R      N +  LE RLD++VYR     T   ARQ VNH 
Sbjct: 60  MYG-LNERQFRTLFTRAGKIREGQHGVNFMILLERRLDSLVYRLGLATTREQARQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY  K G  I +K+KSK L  V +A + A    P ++S + + M  T 
Sbjct: 119 HITVDGKRVDIPSYEVKVGQTIGLKEKSKNLQQVKDALE-AVTARPSFVSFDENKMEGTL 177

Query: 180 VRIPSSLKDVPYPVIMQPNLV 200
           VR+P   +  P    +   LV
Sbjct: 178 VRLPERDEMEP---EIDEALV 195


>gi|282890085|ref|ZP_06298617.1| hypothetical protein pah_c012o009 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500013|gb|EFB42300.1| hypothetical protein pah_c012o009 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 229

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 76/196 (38%), Positives = 126/196 (64%), Gaps = 2/196 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  +   PG+HG RR+ K S +G+QL  KQK+K 
Sbjct: 24  MARYTGKKNRIARRFGANVFGRLRNPLLHKPNPPGMHGARRR-KKSDYGVQLEEKQKLKA 82

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE +  + +K+A R   +T+  L   LE RLD +V+R KF  TIFAA+Q V+H H
Sbjct: 83  IYGMLSEGQLINYYKKAARLEANTAQVLAQMLECRLDIVVHRLKFGSTIFAAQQLVSHGH 142

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+  S++ + G VI V++KS+ + ++ EA   + R VPEY+S++ +N     +
Sbjct: 143 ILVDGKKVDRRSFQVRPGMVISVREKSRGIKAIQEAQDSSMRSVPEYLSIDKENFSGQLL 202

Query: 181 RIPSSLKDVPYPVIMQ 196
             PS  + +P+P+ + 
Sbjct: 203 EYPS-YELMPWPIPIN 217


>gi|288919689|ref|ZP_06414016.1| ribosomal protein S4 [Frankia sp. EUN1f]
 gi|288348878|gb|EFC83128.1| ribosomal protein S4 [Frankia sp. EUN1f]
          Length = 209

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 82/214 (38%), Positives = 111/214 (51%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  K  RR    L+ +      PK P+  R Y PG HG+ R     Y  LQ R 
Sbjct: 1   MARYTGADCKRCRREKTKLFLKGSKCETPKCPIEIRPYPPGEHGRGRTKDSEYL-LQKRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK  + YG + EK+FR  + EA+R  G T   L+  LESRLD +VYR  F P+  AARQ
Sbjct: 60  KQKCARIYGVL-EKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNH 172
            V H HV VNGR V+I SYR  E D++E+  KS++L   + A + A   R VP +I    
Sbjct: 119 AVRHGHVQVNGRKVDIPSYRVTENDIVEIAPKSRELTPFIVARETAGTGRTVPPWIEAIP 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             M      +P+          +Q  L+VE YS+
Sbjct: 179 SQMRLLVHSLPARQ---VIDTQVQEQLIVELYSK 209


>gi|188996212|ref|YP_001930463.1| ribosomal protein S4 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226695086|sp|B2V7I6|RS4_SULSY RecName: Full=30S ribosomal protein S4
 gi|188931279|gb|ACD65909.1| ribosomal protein S4 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 204

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           M +      K+ RR+G  + G        R++ PG HG+ + + K S +G++L+ KQK++
Sbjct: 1   MGRYIGPLTKVSRRLGVFVGG-DIESFQKRNFPPGQHGRTQGRKKLSDYGVRLQEKQKLR 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E +F+  F+ A ++ G+T   L+  LE RLD +VYR  F  T   ARQ V H 
Sbjct: 60  FLYGGIREGQFKRYFERASKAAGNTGTVLLQLLERRLDNVVYRLGFAKTRLQARQLVKHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178
           H LVNG+ V+I SY   +GD+IEV++KSK+L    E  +  + R VP ++ ++ DN    
Sbjct: 120 HFLVNGKKVDIPSYELDKGDIIEVREKSKKLEVFKENLESRDPRSVPRWLEIDKDNFRGK 179

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYS 205
            V      +++   + +    ++E+YS
Sbjct: 180 VV---EIPEEIELEIPVNVQYIIEYYS 203


>gi|11465958|ref|NP_054500.1| ribosomal protein S4 [Nicotiana tabacum]
 gi|78102536|ref|YP_358677.1| ribosomal protein S4 [Nicotiana sylvestris]
 gi|133960|sp|P06359|RR4_TOBAC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|90101663|sp|Q3C1H5|RR4_NICSY RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|11834|emb|CAA77354.1| ribosomal protein S4 [Nicotiana tabacum]
 gi|77799563|dbj|BAE46652.1| ribosomal protein S4 [Nicotiana sylvestris]
 gi|225202|prf||1211235AG ribosomal protein S4
          Length = 201

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P N    G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPRN----GSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K  A +  +   +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQISLDSSPHEELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|202958458|dbj|BAG71117.1| ribosomal protein S4 [Petunia integrifolia]
 gi|202958473|dbj|BAG71118.1| ribosomal protein S4 [Petunia integrifolia subsp. inflata]
 gi|202958481|dbj|BAG71119.1| ribosomal protein S4 [Petunia integrifolia subsp. inflata]
          Length = 201

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K  A +  +   +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDEQKSRALIQISLDSSPHEELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|229577756|ref|YP_002836092.1| ribosomal protein S4 [Megaleranthis saniculifolia]
 gi|226933884|gb|ACO92017.1| ribosomal protein S4 [Megaleranthis saniculifolia]
          Length = 201

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    + G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + +  A +      +   ++P++++++      + 
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYLDSSPHEELPKHLTLHSSQYKGSV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|254798683|ref|YP_003058268.1| ribosomal protein S4 [Parachlorella kessleri]
 gi|229915631|gb|ACQ90974.1| ribosomal protein S4 [Parachlorella kessleri]
          Length = 207

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 115/212 (54%), Gaps = 13/212 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54
           MS+    K +I RR+GE      K  V  R++ PG HG ++K      +K S + ++L+ 
Sbjct: 1   MSRYRGPKLRIVRRLGELPGLTQK--VCVRNFPPGQHGPKKKLTGSQKAKESQYAIRLKE 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++  YG I+E++     +EA R +G T   L+  LE+RLD +++R  F PTI AARQ
Sbjct: 59  KQKLRFNYG-INERQLLKYIREARRRKGSTGEVLLQLLETRLDNVIFRLGFAPTIAAARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H+LVN   +NI SY CK  DVI V + S+ L +    + L    VP ++ ++ + 
Sbjct: 118 LVAHGHILVNQHKINIPSYICKINDVIGVCETSRPLIT-KSLNSLGLPQVPSFLDLDQEK 176

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A      S        + +   LVVE+YSR
Sbjct: 177 LSAVVTNSISRD---MVGLNINELLVVEYYSR 205


>gi|218281549|ref|ZP_03487978.1| hypothetical protein EUBIFOR_00543 [Eubacterium biforme DSM 3989]
 gi|218217338|gb|EEC90876.1| hypothetical protein EUBIFOR_00543 [Eubacterium biforme DSM 3989]
          Length = 202

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 4/206 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  K  RR+G ++       +  R   PG HG  R+ K + +G+QL+ KQ+++ 
Sbjct: 1   MSRNTGSIWKKSRRLGFSV-LETGEELTRRDTIPGQHGSPRRPKLTNYGIQLQEKQRIRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SEK+F + + +A +  G    N +  LESRLD IVYR  F  T  A+RQ VNH H
Sbjct: 60  TY-QLSEKQFYNTYLKASKKAGSAGENFLVMLESRLDNIVYRMGFARTRRASRQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV+G+ V+I S++ K G VIE+++++K L+ + EA + A   V +++ VN D    T+V
Sbjct: 119 VLVDGKKVDIPSFQVKPGQVIEIRERAKNLSVINEALEAATATV-DFVEVNKDAKKGTYV 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +       +   LVVEFY+R
Sbjct: 178 RYPERKELFTAQ-EINELLVVEFYNR 202


>gi|317181016|dbj|BAJ58802.1| 30S ribosomal protein S4 [Helicobacter pylori F32]
          Length = 208

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 129/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG +SEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-VSEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ +++ SY  + G  IE+K+K+K    V+ A +L A+  +  +I V  D
Sbjct: 119 LVTHGHVLVDGKRLDVPSYFVRSGQKIEIKEKTKNNPQVVRAMELTAQTGIVPWIDVEKD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   V ++  L+VE YS+
Sbjct: 179 KKYGIFTRYPEREEVV---VPIEERLIVELYSK 208


>gi|118627520|emb|CAL39394.1| small ribosomal protein 4 [Lophozia ascendens]
          Length = 202

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQXLLQLLEMRLDNTIFRLGMAXTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L  +  +P +++ +   +    
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFXKMKIPSHLTFDLTQLQGXV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|118625965|emb|CAL39304.1| small ribosomal protein 4 [Leptoscyphus ovatus]
          Length = 202

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLEPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD++ ++ + K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LVVE+YSR
Sbjct: 177 TQIINR---EWINLKINELLVVEYYSR 200


>gi|157689546|gb|ABV65329.1| ribosomal protein S4 [Quercus nigra]
          Length = 202

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 10/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVAT 178
           +LVNGR V+I SYRCK  D+I  + + K  A +      + RD  +P++++ +       
Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITARDEQKYRALIKNCLDSSPRDEELPKHLTFHPFQYKGL 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  S       + +   LVVE+YSR
Sbjct: 176 VNQIIDSK---WVGLKINELLVVEYYSR 200


>gi|118625947|emb|CAL39295.1| small ribosomal protein 4 [Gymnocoleopsis multiflora]
          Length = 202

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVSIARKAKGSTGQVLLQLLEMRLDNTIFRLGIAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SY C+ GD+I +K K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ILVNSNLVDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +      + +   LVVE+YSR
Sbjct: 177 NQ---RVNREWVNLKINELLVVEYYSR 200


>gi|118626015|emb|CAL39325.1| small ribosomal protein 4 [Nardia scalaris]
          Length = 202

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200


>gi|116617110|ref|YP_817484.1| ribosomal protein S4 [Coffea arabica]
 gi|122153623|sp|A0A337|RR4_COFAR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|116242166|gb|ABJ89681.1| ribosomal protein S4 [Coffea arabica]
          Length = 201

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----RAGNDLRNQLRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K  A + ++   + + ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITGKDEQKSRALIQKSLDSSPQEELPSHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|322378755|ref|ZP_08053184.1| 30S ribosomal protein S4 [Helicobacter suis HS1]
 gi|322380604|ref|ZP_08054756.1| 30S ribosomal protein S4 [Helicobacter suis HS5]
 gi|321146926|gb|EFX41674.1| 30S ribosomal protein S4 [Helicobacter suis HS5]
 gi|321148785|gb|EFX43256.1| 30S ribosomal protein S4 [Helicobacter suis HS1]
          Length = 208

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++  S+  K++RR G +L  +       KS ++ RSYGPG HGQ R+ K S +GLQLR 
Sbjct: 1   MARYRSAVEKLERRFGVSLALKGERRLSGKSALDKRSYGPGQHGQ-RRGKISDYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIFKEA+R  G+T  NLI  LE RLD +VYR  F  T   ARQ
Sbjct: 60  KQKAKAMYG-ISEKQFRSIFKEANRMEGNTGENLICLLERRLDNVVYRMGFASTRSFARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173
            V H H+LV+G+ ++I S   + G  IE+ +KSK+   +  + +L+++  +  +I V+ D
Sbjct: 119 LVTHGHILVDGKRLDIPSAFIRHGQKIELIEKSKENPQIARSIELSKQTGMVAWIDVDQD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                F R P   + V   + ++  L+VE YS+
Sbjct: 179 KRFGIFTRYPQREEVV---IPIEERLIVELYSK 208


>gi|118625933|emb|CAL39288.1| small ribosomal protein 4 [Jamesoniella purpurascens]
          Length = 202

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD I ++ K K  + + + + L ++  +P ++  +   +    
Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKVKIPSHLIFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200


>gi|32480845|ref|NP_862756.1| ribosomal protein S4 [Calycanthus floridus var. glaucus]
 gi|52783277|sp|Q7YJX0|RR4_CALFG RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|32399381|emb|CAD28723.1| ribosomal protein S4'' [Calycanthus floridus var. glaucus]
          Length = 201

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + +  A +          ++P++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYLDSPSHEELPKHLTFHPSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|313199704|ref|YP_004021318.1| ribosomal protein S4 [Theobroma cacao]
 gi|309321268|gb|ADO64811.1| ribosomal protein S4 [Theobroma cacao]
 gi|328924785|gb|ADO64892.2| ribosomal protein S4 [Theobroma cacao]
          Length = 201

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RTGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVCIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR+V+I SYRCK  D+I  + + K    +      +   ++P++++++        
Sbjct: 116 ILVNGRTVDIPSYRCKPRDIISARDEQKSRTLIQNYLDSSTHEELPKHLTLHTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199


>gi|166092850|gb|ABY82378.1| ribosomal protein S4 [Silene integripetala]
          Length = 201

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|261414617|ref|YP_003248300.1| ribosomal protein S4 [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371073|gb|ACX73818.1| ribosomal protein S4 [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327627|gb|ADL26828.1| ribosomal protein S4 [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 201

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 116/206 (56%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     K K+ R +G  +  + +  ++ R++ PG HGQ RK   S +  QL  KQ+++ 
Sbjct: 1   MSSFRGPKGKVARSLGVAVSQKTQKALDRRNFAPGQHGQTRKKSASVYKQQLVEKQRLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y +ISE +    +KEA+R  G    NL+  LE+RLD +VYR  F  TIFAARQ+V H H
Sbjct: 61  TY-NISEAQLAKAYKEANRREGSAGDNLMILLETRLDAVVYRMGFARTIFAARQYVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             VNG      S   K GDVI V+++SK+   + EA   A    PEY+SV+   M  T V
Sbjct: 120 FTVNGVRSFSPSRLIKAGDVIAVREQSKEHVQIKEAIASAAAA-PEYLSVDLGKMQGTLV 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P   +    PV ++  LVVE+YSR
Sbjct: 179 KLPLRDQ---IPVKLEEQLVVEYYSR 201


>gi|118627508|emb|CAL39388.1| small ribosomal protein 4 [Lophozia ventricosa var. ventricosa]
          Length = 202

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L  +  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCETGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|166092844|gb|ABY82374.1| ribosomal protein S4 [Silene zawadskii]
          Length = 201

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++  S     + + +   LVVE+YSR
Sbjct: 176 NQLIDSK---WFGLKINELLVVEYYSR 199


>gi|166092881|gb|ABY82398.1| ribosomal protein S4 [Heliosperma alpestre]
          Length = 201

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +     L+   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFLDLSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118626029|emb|CAL39330.1| small ribosomal protein 4 [Scapania lingulata]
          Length = 202

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLRQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWINLKINELLVVEYYSR 200


>gi|118626009|emb|CAL39322.1| small ribosomal protein 4 [Mylia taylorii]
          Length = 203

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 61/208 (29%), Positives = 108/208 (51%), Gaps = 9/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVAT 178
           + +N   V+I SY C+ GD++ ++ K K  + + +   L  ++  +P ++S +  N+  +
Sbjct: 117 ISINNDIVDIPSYNCEPGDILTIRNKQKSQSIITKNINLLNQNLKIPSHLSFDSTNLRGS 176

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  +        + +   LVVE+YSR
Sbjct: 177 INQTINR---EWVNLKINELLVVEYYSR 201


>gi|111023124|ref|YP_706096.1| 30S ribosomal protein S4 [Rhodococcus jostii RHA1]
 gi|226365623|ref|YP_002783406.1| 30S ribosomal protein S4 [Rhodococcus opacus B4]
 gi|122955187|sp|Q0S3E8|RS4_RHOSR RecName: Full=30S ribosomal protein S4
 gi|254764607|sp|C1B040|RS4_RHOOB RecName: Full=30S ribosomal protein S4
 gi|110822654|gb|ABG97938.1| 30S ribosomal protein S4 [Rhodococcus jostii RHA1]
 gi|226244113|dbj|BAH54461.1| 30S ribosomal protein S4 [Rhodococcus opacus B4]
          Length = 201

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +KEA+   G T  NL+  LESRLD +VYRA    T   ARQ V H H
Sbjct: 59  TYG-VMEKQFRLYYKEANNRPGKTGENLLRILESRLDNVVYRAGLARTRRQARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           +LVN + V+I SYR  + D+I+VK+KS        A +   +R +P ++ V    +    
Sbjct: 118 LLVNNKKVDIPSYRVSQYDIIDVKEKSLSTLPFQVARETQGDRPIPGWLQVVGGRLRVLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE+YS+
Sbjct: 178 HQLPERAQ---IDVPLQEQLIVEYYSK 201


>gi|290487074|gb|ADD29921.1| ribosomal protein S4 [Nelumbo nucifera]
          Length = 201

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----KAGSDLRNQARSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVCIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|312140890|ref|YP_004008226.1| 30S ribosomal protein s4 rpsd [Rhodococcus equi 103S]
 gi|325675472|ref|ZP_08155156.1| 30S ribosomal protein S4 [Rhodococcus equi ATCC 33707]
 gi|311890229|emb|CBH49547.1| 30S ribosomal protein S4 RpsD [Rhodococcus equi 103S]
 gi|325553443|gb|EGD23121.1| 30S ribosomal protein S4 [Rhodococcus equi ATCC 33707]
          Length = 201

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPITRKSRRLRVDLVGGDQ-AFERRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA    G T  NL+  LESRLD +VYRA    T   ARQ V H H
Sbjct: 59  TYG-VMEKQFRRYYQEAVNRPGKTGENLLQILESRLDNVVYRAGLARTRRQARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           +LVN + V+I SYR  + D+I+V++KS        A +   +R +P ++ V    +    
Sbjct: 118 LLVNNKKVDIPSYRVSQYDIIDVREKSLATLPFQVARETQGDRPIPGWLQVVGGRLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +Q  L+VE+YS+
Sbjct: 178 HQLPERAQ---IEVPLQEQLIVEYYSK 201


>gi|118625969|emb|CAL39306.1| small ribosomal protein 4 [Syzygiella rubricaulis]
          Length = 202

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY CK GD I ++ K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISINNGIVDIPSYNCKPGDTITIRNKEKSQSIITQNTNLLQKVKIPSHLTFDLTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWVNLKINELLVVEYYSR 200


>gi|81176252|ref|YP_398331.1| ribosomal protein S4 [Lactuca sativa]
 gi|90101661|sp|Q332X6|RR4_LACSA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|78675170|dbj|BAE47596.1| chloroplast 30S ribosomal protein S4 [Lactuca sativa]
 gi|88656985|gb|ABD47235.1| ribosomal protein S4 [Lactuca sativa]
          Length = 201

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  + + K    +  +   +   ++P ++++         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSKVLIQNSLDSSPHEELPNHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|290487062|gb|ADD29915.1| ribosomal protein S4 [Aucuba japonica]
          Length = 201

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +  +   + R ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNSLDSSTREELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|317505828|ref|ZP_07963673.1| ribosomal protein S4 [Segniliparus rugosus ATCC BAA-974]
 gi|316255910|gb|EFV15135.1| ribosomal protein S4 [Segniliparus rugosus ATCC BAA-974]
          Length = 201

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  K     RSY PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPITRRSRRLRVDLVGGDK-AFERRSYPPGQHGRSRVKESEYL-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ ++EA R  G T  NL+  LE+RLD ++YRA    T   ARQ V H H
Sbjct: 59  TYG-VMERQFRNYYEEAHRRTGKTGENLLRILETRLDNVIYRAGLARTRRHARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
            LVN + V++ SYR  + D+I+V+++S        A +L  +R VP ++ V  D +    
Sbjct: 118 FLVNQKRVDVPSYRVSQYDIIDVREQSTHADPFEIARELFGDRPVPGWLQVVPDTLRIFV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              P   +     V +Q  L+VEFYS+
Sbjct: 178 HAEPVREQ---IDVPLQEQLIVEFYSK 201


>gi|118627500|emb|CAL39384.1| small ribosomal protein 4 [Lophocolea difformis]
          Length = 202

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|118627528|emb|CAL39398.1| small ribosomal protein 4 [Schistochilopsis incisa]
          Length = 202

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNTIFRLGMALTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSVITKNLNLFQKLKIPNHLTFDFTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|73666827|ref|YP_302843.1| 30S ribosomal protein S4 [Ehrlichia canis str. Jake]
 gi|123615083|sp|Q3YSR0|RS4_EHRCJ RecName: Full=30S ribosomal protein S4
 gi|72393968|gb|AAZ68245.1| SSU ribosomal protein S4P [Ehrlichia canis str. Jake]
          Length = 202

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 99/206 (48%), Positives = 137/206 (66%), Gaps = 4/206 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K++  RR+G +LWGR K P NTR+Y PG HG     KPS FG Q  A +K K 
Sbjct: 1   MAVQR--KYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFAAHKKFKF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY  IS K+ R++F +A + RGDT  N +  LESRL +I+Y +  VPTIF+ARQ ++H+H
Sbjct: 59  YYA-ISSKQMRNVFLKAYKKRGDTGDNFVGLLESRLSSILYNSGLVPTIFSARQLISHKH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVNG++VNI SY  K GDV+ +K+K+K L +V+ A Q  E  VP+Y+ V+       ++
Sbjct: 118 VLVNGKTVNISSYIVKVGDVVTLKEKAKNLPAVIAAIQSQEHKVPDYLEVDTQEKSVRYL 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   + VPYP  M+ NLV+EFYSR
Sbjct: 178 RVPKYCE-VPYPATMEVNLVIEFYSR 202


>gi|118626077|emb|CAL39342.1| small ribosomal protein 4 [Plicanthus hirtellus]
          Length = 202

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYSCESGDIITIRNKQKSQSIITKNINLFQKSKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|166092861|gb|ABY82385.1| ribosomal protein S4 [Silene sordida]
          Length = 201

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIMAKDEQKSRALIKNFLDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|139389420|ref|YP_001123117.1| ribosomal protein S4 [Olimarabidopsis pumila]
 gi|152060556|sp|A4QJT5|RR4_OLIPU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286314|dbj|BAF49941.1| ribosomal protein S4 [Olimarabidopsis pumila]
          Length = 201

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK        V       A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDDQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|118627538|emb|CAL39402.1| small ribosomal protein 4 [Lophozia excisa]
          Length = 202

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I +K K K  + + +   L ++  +P ++  +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCQPGDIITIKNKPKSQSIITKNLNLFQKLKIPSHLIFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200


>gi|48527361|gb|AAT45813.1| small ribosomal protein 4 [Plagiochila bicuspidata]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRXKIIRRLGTLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +K K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|253999473|ref|YP_003051536.1| 30S ribosomal protein S4 [Methylovorus sp. SIP3-4]
 gi|253986152|gb|ACT51009.1| ribosomal protein S4 [Methylovorus sp. SIP3-4]
          Length = 205

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 5/205 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           MS+    + K+ R +G +L G  +  +  R   PG HG +  + K S FG++L  KQK++
Sbjct: 1   MSRFTGPRLKVMRALGVDLPGLSRKSIEQRPTPPGQHGAKAVRRKKSDFGIKLMEKQKLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SE++ R +  +A R +  T   L+  LE RLD +V+RA F PTI AARQ V+HR
Sbjct: 61  FNYG-LSERQLRRLMVDARRGKAPTGETLLQLLERRLDNVVFRAGFAPTIAAARQLVSHR 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ +NG+ V+I S R + GD I +K  S Q+  V E  +      PE++S +    VA  
Sbjct: 120 HLQLNGKVVSIPSIRLRVGDEISLKPASAQIPIVNETLKDMPLIRPEWLSWDDTQRVARI 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
             +P+  +DVP+PV +    VVE+Y
Sbjct: 180 SHLPA-AEDVPFPVDV--QQVVEYY 201


>gi|41410330|ref|NP_963166.1| 30S ribosomal protein S4 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118464319|ref|YP_883534.1| 30S ribosomal protein S4 [Mycobacterium avium 104]
 gi|254776831|ref|ZP_05218347.1| 30S ribosomal protein S4 [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|61215639|sp|Q73S44|RS4_MYCPA RecName: Full=30S ribosomal protein S4
 gi|152112231|sp|A0QKU6|RS4_MYCA1 RecName: Full=30S ribosomal protein S4
 gi|41399164|gb|AAS06782.1| RpsD [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118165606|gb|ABK66503.1| ribosomal protein S4 [Mycobacterium avium 104]
          Length = 201

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD +VYRA    T   ARQ V H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  V++ SYR  + D+I+V+++S        A + A +R VP ++ V  +      
Sbjct: 118 FTVNGVRVDVPSYRVSQYDIIDVREQSLNSVPFQIARETAGDRPVPSWLQVVGERQRILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VEFYS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEFYSK 201


>gi|86438886|emb|CAJ55411.1| small ribosomal protein 4 [Plagiochila dusenii]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCQPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|240167782|ref|ZP_04746441.1| 30S ribosomal protein S4 [Mycobacterium kansasii ATCC 12478]
          Length = 201

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+I+V+  S        A + A +R +P ++ V  +      
Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDTSLNTVPFQIARETAGDRPIPSWLQVVGERQRILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VEFYS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEFYSK 201


>gi|118626161|emb|CAL39378.1| small ribosomal protein 4 [Lophozia wenzelii]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQXLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L  +  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEXGDIITIRNKQKSQSIITKNLNLFRKMKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|118626079|emb|CAL39343.1| small ribosomal protein 4 [Delavayella serrata]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K      SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I VK K K  + + +   L ++  +P ++  +  N+  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKSKIPSHLIFDSTNLSGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---ESINLKINELLVVEYYSR 200


>gi|313201502|ref|YP_004040160.1| 30S ribosomal protein S4 [Methylovorus sp. MP688]
 gi|312440818|gb|ADQ84924.1| ribosomal protein S4 [Methylovorus sp. MP688]
          Length = 205

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 5/205 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           MS+    + K+ R +G +L G  +  +  R   PG HG +  + K S FG++L  KQK++
Sbjct: 1   MSRFTGPRLKVMRALGVDLPGLSRKSIEQRPTPPGQHGAKAVRRKKSDFGIKLMEKQKLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SE++ R +  +A R +  T   L+  LE RLD +V+RA F PTI AARQ V+HR
Sbjct: 61  FNYG-LSERQLRRLMVDARRGKAPTGETLLQLLERRLDNVVFRAGFAPTIAAARQLVSHR 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ +NG+ V+I S R + GD I +K  S Q+  V E  +      PE++S +    VA  
Sbjct: 120 HLQLNGKVVSIPSIRLRVGDEISLKPASAQIPIVNETLKDMPLIRPEWLSWDDTQRVARI 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
             +P+  +DVP+PV +    VVE+Y
Sbjct: 180 AHLPA-AEDVPFPVDV--QQVVEYY 201


>gi|118626017|emb|CAL39326.1| small ribosomal protein 4 [Marsupella lacerata]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  +YR     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIYRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPGHLTFDSIELRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200


>gi|71891998|ref|YP_277728.1| 30S ribosomal protein S4 [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|90101676|sp|Q493I5|RS4_BLOPB RecName: Full=30S ribosomal protein S4
 gi|71796104|gb|AAZ40855.1| 30S ribosomal subunit protein S4 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 207

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR G +L+ +     ++++      PG H   RKS+ S +G+QLR KQ
Sbjct: 1   MAKYLGPKLKLSRREGTDLFLKSGIRAIDSKCKLDQPPGQH-NMRKSRFSDYGIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++F + +K A R +G+T  NL+  LESRLD  VYR  F  T   ARQ V
Sbjct: 60  KVRRIYG-ILERQFSNYYKRAARIKGNTGENLLKLLESRLDNTVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174
           +H+ ++V  R VNI SY+     VI++ +KS + + +  + +L+E  R+   +I V+   
Sbjct: 119 SHKSIMVENRIVNIASYQVVPNTVIKIHKKSHKQSRIRASLELSEQQREKLAWIEVDPIK 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F R P   +       +  +L++E YS+
Sbjct: 179 LQGLFKRYPERSE---LSANIDEHLIIELYSK 207


>gi|118625961|emb|CAL39302.1| small ribosomal protein 4 [Chiloscyphus vermicularis]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNEIVDIPSYNCEPGDIIAIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|88607037|ref|YP_505552.1| 30S ribosomal protein S4 [Anaplasma phagocytophilum HZ]
 gi|123494635|sp|Q2GJ99|RS4_ANAPZ RecName: Full=30S ribosomal protein S4
 gi|88598100|gb|ABD43570.1| ribosomal protein S4 [Anaplasma phagocytophilum HZ]
          Length = 204

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 2/198 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G NLWGR K P NTR+Y PG HG     K S FG Q  A QK K YY  +S 
Sbjct: 8   KYRASRRLGVNLWGRSKDPFNTRNYPPGQHGAMGYKKLSSFGRQFVAHQKFKCYY-VVSS 66

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++ R++F +A R +GDT  NL+  LESRL ++VY A  VPT+F+ARQ V+H+HV VNGR 
Sbjct: 67  RQLRNVFLKAYRKKGDTGDNLVGALESRLASVVYSAGLVPTMFSARQLVSHKHVTVNGRV 126

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI S+  K GD++EV++++ QL  VL A Q  ER VP+++ VN + +   ++ +P    
Sbjct: 127 VNIPSFSVKPGDIVEVRKRASQLPMVLAAIQSQERRVPDHLDVNTEKLSVKYLAVP-KYS 185

Query: 188 DVPYPVIMQPNLVVEFYS 205
           DVPYP  M+ NLVVEFYS
Sbjct: 186 DVPYPANMEVNLVVEFYS 203


>gi|166092869|gb|ABY82390.1| ribosomal protein S4 [Silene pseudoatocion]
          Length = 201

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +          ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFLYSSPPDELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|91208904|ref|YP_538937.1| ribosomal protein S4 [Gossypium hirsutum]
 gi|119368501|ref|YP_913189.1| ribosomal protein S4 [Gossypium barbadense]
 gi|325210932|ref|YP_004286006.1| ribosomal protein S4 [Gossypium thurberi]
 gi|90101660|sp|Q2L908|RR4_GOSHI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|125987751|sp|A0ZZ37|RR4_GOSBA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|85687418|gb|ABC73630.1| ribosomal protein S4 [Gossypium hirsutum]
 gi|119224863|dbj|BAF41249.1| Ribosomal protein S4 [Gossypium barbadense]
 gi|290775794|gb|ADD62290.1| ribosomal protein S4 [Gossypium thurberi]
          Length = 201

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR+V+I SYRCK  D+I  + + K    +      +   ++P++++ +        
Sbjct: 116 ILVNGRTVDIPSYRCKPRDIISARDEQKSRTLIQNYLDSSTNEELPKHLTFHTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199


>gi|197294102|ref|YP_002149723.1| ribosomal protein S4 [Cicer arietinum]
 gi|197089790|gb|ACH41060.1| ribosomal protein S4 [Cicer arietinum]
          Length = 201

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G+      K P    + G  L  Q   SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGDLPGLTSKRP----TVGSELRNQSSSSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           V VNGR V+I SYRCK  D+I  K   K +  +  + + + R ++P +++++        
Sbjct: 116 VFVNGRIVDIPSYRCKPQDIITAKDDQKSITLIQNSLESSPREELPNHLTLHPSEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|139388096|ref|YP_001123288.1| ribosomal protein S4 [Barbarea verna]
 gi|139388912|ref|YP_001123639.1| ribosomal protein S4 [Lepidium virginicum]
 gi|139389098|ref|YP_001123816.1| ribosomal protein S4 [Nasturtium officinale]
 gi|152060546|sp|A4QKA7|RR4_BARVE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|152060553|sp|A4QLA8|RR4_LEPVR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|152060555|sp|A4QLT5|RR4_NASOF RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286487|dbj|BAF50112.1| ribosomal protein S4 [Barbarea verna]
 gi|134286842|dbj|BAF50463.1| ribosomal protein S4 [Lepidium virginicum]
 gi|134287021|dbj|BAF50640.1| ribosomal protein S4 [Nasturtium officinale]
          Length = 201

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|48527367|gb|AAT45816.1| small ribosomal protein 4 [Plagiochila deltoidea]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPNHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|118627498|emb|CAL39383.1| small ribosomal protein 4 [Lophozia sudetica]
 gi|118627542|emb|CAL39404.1| small ribosomal protein 4 [Protolophozia debiliformis]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++     +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKRKSQSIITQNINLFQKLKIPSHLTFELAQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|324999251|ref|ZP_08120363.1| 30S ribosomal protein S4 [Pseudonocardia sp. P1]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPMTRKSRRLKTDLVGGDQ-AFERRPYPPGQHGRIRIKETEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+ R+ ++EA R  G T   L+  LESRLD +VYRA    T   ARQ VNH H
Sbjct: 59  GYG-LQEKQLRAYYEEAHRREGKTGDELLQILESRLDNVVYRAGLARTRRMARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
            LVNG+ V+I S++  + D+I+V++KS+     + A +   +R VP ++ V    +    
Sbjct: 118 FLVNGKKVDIPSFKVSKYDIIDVREKSRNTDPFVIAKETQGDRPVPAWLQVVPSTLRILV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +       +   L+VE+YS+
Sbjct: 178 HQLPERAQ---IDTQVTEQLIVEYYSK 201


>gi|295698627|ref|YP_003603282.1| ribosomal protein S4 [Candidatus Riesia pediculicola USDA]
 gi|291157482|gb|ADD79927.1| ribosomal protein S4 [Candidatus Riesia pediculicola USDA]
          Length = 206

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M +   +K K+ RR G +L+ +     + ++      PG HG  +KS+ S +G+Q R KQ
Sbjct: 1   MGRYLGAKLKLSRREGTDLFLKSNIRQIESKCKIDRFPGQHGA-KKSRLSDYGIQFREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG I E++FR  + ++ + +G+T  NL+  LE RLD +VYR     T   ARQ V
Sbjct: 60  KLRRIYG-ILERQFRRYYMKSSKLKGNTGENLLVLLERRLDNVVYRIGLGSTRSEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNM 175
           +H+ +LVN + VNI SY+    D+IE  + S     +  + +L+ +R+   ++ ++ + M
Sbjct: 119 SHKSILVNKKIVNIPSYQVNIDDIIETSEFSSSQNRIKSSIELSQQREQVSWLEISSEKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +R+P        P  +  +L+VE YS+
Sbjct: 179 RGRVLRLPVRDD---LPTDINEHLIVELYSK 206


>gi|290487068|gb|ADD29918.1| ribosomal protein S4 [Ilex cornuta]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K +  V  +   +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSIVLVQNSLDSSPHEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|166092858|gb|ABY82383.1| ribosomal protein S4 [Silene cryptoneura]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIKNLIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|166092847|gb|ABY82376.1| ribosomal protein S4 [Silene sorensenis]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K    +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRTLIQNLIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118626035|emb|CAL41744.1| small ribosomal protein 4 [Scapania hyperborea]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---ECINLKINELLVVEYYSR 200


>gi|118626123|emb|CAL41758.1| small ribosomal protein 4 [Anastrophyllum minutum]
 gi|118626127|emb|CAL39361.1| small ribosomal protein 4 [Anastrophyllum minutum]
 gi|118626129|emb|CAL39362.1| small ribosomal protein 4 [Anastrophyllum minutum]
 gi|118626131|emb|CAL39363.1| small ribosomal protein 4 [Anastrophyllum minutum]
 gi|118626133|emb|CAL39364.1| small ribosomal protein 4 [Anastrophyllum minutum var. weberi]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|57238927|ref|YP_180063.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden]
 gi|58578860|ref|YP_197072.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden]
 gi|81557345|sp|Q5HBY1|RS4_EHRRW RecName: Full=30S ribosomal protein S4
 gi|57161006|emb|CAH57912.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden]
 gi|58417486|emb|CAI26690.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Welgevonden]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 93/199 (46%), Positives = 130/199 (65%), Gaps = 2/199 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G +LWGR K P NTR+Y PG HG     KPS FG Q  A +K K YY  IS 
Sbjct: 6   KYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFGAHKKFKFYYA-ISS 64

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+ R++F +A + +GDT  N +  LES L +++Y +  VPTIF+ARQ ++H+HVLVNG+ 
Sbjct: 65  KQMRNMFLKAYKKKGDTGDNFVGLLESMLSSVLYNSGLVPTIFSARQLISHKHVLVNGKV 124

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI SY  K GD I++++K+  L  VL A    E+ VP+Y+ V+       ++R+P   +
Sbjct: 125 VNISSYSVKPGDTIKLREKAVNLPPVLAAIDAQEQKVPDYLEVDVKERSVKYLRVPKYYE 184

Query: 188 DVPYPVIMQPNLVVEFYSR 206
            VPYP  M+ NLV+EFYSR
Sbjct: 185 -VPYPANMEVNLVIEFYSR 202


>gi|118626135|emb|CAL39365.1| small ribosomal protein 4 [Barbilophozia lycopodioides]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I +K K K  + V +   L ++  +P +++     +    
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIKSKQKSQSIVTQNINLFQKLKIPSHLTFELAQLRGYV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|281190726|ref|YP_003330963.1| ribosomal protein S4 [Parthenium argentatum]
 gi|269924839|gb|ACZ52712.1| ribosomal protein S4 [Parthenium argentatum]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  + + K  A +      +   ++P ++++         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDTIAARDEQKSRALIQNYLDSSPPEELPNHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118627512|emb|CAL39390.1| small ribosomal protein 4 [Lophozia sudetica]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + + + L ++  +P +++     +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKRKSQSIITQNTNLFQKLKIPSHLTFELAQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|118625937|emb|CAL39290.1| small ribosomal protein 4 [Schistochilopsis incisa]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAVTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P ++  +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNCEPGDIITIRNKQKSQSVITKNLNLFQKLKIPSHLIFDFTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|71842275|ref|YP_277363.1| ribosomal protein S4 [Emiliania huxleyi]
 gi|90101658|sp|Q4G3A4|RR4_EMIHU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|60101518|gb|AAX13862.1| ribosomal protein S4 [Emiliania huxleyi]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   +K +I RR+G+      K  +  R+  PG HG  +K KP+ +G++L  KQK++ 
Sbjct: 1   MARYRGAKLRITRRLGDLPGLTSK--IAKRTSRPGQHGAVQK-KPTQYGIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+  +  ++A   +G T   L+  LE RLD +++R    PTI AARQ V+H+H
Sbjct: 58  NYG-ISEKQLMNYIRQAKGIKGTTGTILLQLLEMRLDNLIFRLGLAPTIAAARQLVSHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VN   V+I SY+C+ GDV+ V+  +   + V    +       P+++  +  N+ A  
Sbjct: 117 IQVNNTRVSIPSYQCQPGDVLSVRDNAASKSLVNTYLESPSLSQSPQHLDFDKKNLTAKV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + I          + +    V+E+YSR
Sbjct: 177 LGIVDR---EWVALKLNELFVIEYYSR 200


>gi|166092838|gb|ABY82370.1| ribosomal protein S4 [Silene littorea]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199


>gi|139387254|ref|YP_001123375.1| ribosomal protein S4 [Capsella bursa-pastoris]
 gi|297837951|ref|XP_002886857.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
 gi|152060547|sp|A4QKJ4|RR4_CAPBU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286575|dbj|BAF50199.1| ribosomal protein S4 [Capsella bursa-pastoris]
 gi|297332698|gb|EFH63116.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|118625967|emb|CAL39305.1| small ribosomal protein 4 [Jamesoniella undata]
          Length = 202

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY CK  D I ++ K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISINNGIVDIPSYNCKPDDTITIRNKEKSQSIITQNTNLFQKVKIPSHLTFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWVNLKINELLVVEYYSR 200


>gi|323341678|ref|ZP_08081911.1| 30S ribosomal protein S4 [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464103|gb|EFY09296.1| 30S ribosomal protein S4 [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 200

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++ +    K  RR+  ++       +  R Y PG HG+ R+ K S +GLQLR KQ+++ 
Sbjct: 1   MARIKGPVWKKARRLSFSI-LETGEELQRRDYAPGQHGKARRPKLSNYGLQLREKQRIRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+F + FK+A +  G   HN +  LESRLD +VYR     T   ARQ VNH H
Sbjct: 60  TYG-VTEKQFYNTFKKASKLEGVAGHNFLFMLESRLDNVVYRMNLSRTRRGARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  K G  IEVK+ S+ +A++ ++ + A   + +Y++ + D     + 
Sbjct: 119 ILVDGKKVDIPSYIVKPGQTIEVKESSRSMAAIKDSLE-ANVSMVDYVTFDKDKFKGEYK 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +   LVVEFY+R
Sbjct: 178 RLPERSE---LNQEINEALVVEFYNR 200


>gi|239582581|dbj|BAH70342.1| ribosomal protein S4 [Cercidiphyllum japonicum]
 gi|239582602|dbj|BAH70347.1| ribosomal protein S4 [Cercidiphyllum japonicum]
 gi|239582623|dbj|BAH70352.1| ribosomal protein S4 [Cercidiphyllum japonicum]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH+H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHKH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  VNI SYRCK  D+I  + + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGGIVNIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|156598174|gb|ABU85351.1| ribosomal protein S4 [Elaeis oleifera]
          Length = 201

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K K +  A +          ++P++++++        
Sbjct: 116 ILVNGHIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|157689560|gb|ABV65336.1| ribosomal protein S4 [Staphylea colchica]
          Length = 201

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRPVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  + + K    +      +   ++P++++++        
Sbjct: 116 ILVNGCIVDIPSYRCKPQDIITARNEKKSRTLIQNYLDSSPHEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|89257421|gb|ABD64913.1| Chloroplast 30S ribosomal protein S4 [Brassica oleracea]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      +    +  A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLIQNLLESSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|110227081|ref|YP_665560.1| ribosomal protein S4 [Populus alba]
 gi|134093201|ref|YP_001109503.1| ribosomal protein S4 [Populus trichocarpa]
 gi|122224628|sp|Q14FF5|RR4_POPAL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|152060558|sp|A4GYR2|RR4_POPTR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|109945519|dbj|BAE97207.1| ribosomal protein S4 [Populus alba]
 gi|133712063|gb|ABO36706.1| ribosomal protein S4 [Populus trichocarpa]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRAGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K    +  +     + ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRVMIQNSLDSFPQEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I  S       + +   LVVE+YSR
Sbjct: 176 NHIIDSK---WIGLKINELLVVEYYSR 199


>gi|139389803|ref|YP_001123464.1| ribosomal protein S4 [Crucihimalaya wallichii]
 gi|152060549|sp|A4QKT3|RR4_CRUWA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286665|dbj|BAF50288.1| ribosomal protein S4 [Crucihimalaya wallichii]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLIDSSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|41323093|gb|AAR99776.1| small ribosomal protein 4 [Plagiochila buchtiniana]
          Length = 202

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNYIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|69216112|gb|AAZ03894.1| ribosomal protein S4 [Yucca schidigera]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L    R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----RSGSDLKNPLRSVKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +          ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|306486207|gb|ADM92745.1| ribosomal protein S4 [Davidia involucrata]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +  +   +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNSLDSSPHEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|91983994|ref|YP_567078.1| ribosomal protein S4 [Vitis vinifera]
 gi|122242803|sp|Q0ZJ18|RR4_VITVI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|91701652|gb|ABE47536.1| ribosomal protein S4 [Vitis vinifera]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLNYVRIAGKAKGATGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I    + K  A +       +  ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAGNEQKSRALIQNVFDSSSHEELPKHLTLHPFQFKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSN---WVGLKINELLVVEYYSR 199


>gi|159161162|ref|YP_001542449.1| ribosomal protein S4 [Ceratophyllum demersum]
 gi|172048121|sp|A8SEA5|RR4_CERDE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|148508445|gb|ABQ81452.1| ribosomal protein S4 [Ceratophyllum demersum]
 gi|227481121|emb|CAP62500.1| ribosomal protein S4 [Ceratophyllum demersum]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----SPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + +  A + ++   +   +VP+++++      A  
Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITTRDEQRSRALIQKSIDSSPHEEVPKHLTLYPFQYKALV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NKIIDSQ---WIGLKINELLVVEYYSR 199


>gi|149390542|ref|YP_001294186.1| ribosomal protein S4 [Buxus microphylla]
 gi|172048678|sp|A6MM38|RR4_BUXMI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|146762287|gb|ABQ45251.1| ribosomal protein S4 [Buxus microphylla]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|194132117|gb|ACF33371.1| ribosomal protein S4 [Gonystylus bancanus]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K        G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRA----RVGSDLRNQSRPGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYGLI-ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK + K +A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIISVKDEQKSIALIQNYLDSSTHEELPKHLTLHTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199


>gi|162451363|ref|YP_001613730.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
 gi|161161945|emb|CAN93250.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
          Length = 203

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 5/205 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ R +G  L G        R Y PG HGQ RK K S F L+LR KQK++ 
Sbjct: 1   MSRYTGPRVKVMRALGVELPGLSARKTERRPYPPGQHGQARK-KLSEFALRLREKQKVRL 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +++ + +++  EA RS       LI  LE RLD +++RA F  TI AARQ V H H
Sbjct: 60  NYG-LTDTQLKTLMLEARRSDLAAGTKLIELLERRLDNVIFRAGFARTIPAARQLVAHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VL+NG+ V+I SYR   G+ + V +K +   +V+E     + + P +++V+ D   A   
Sbjct: 119 VLINGKRVDIPSYRVTIGETVSVSEKRRDHRTVVEGLARTDMEAPTWLAVDKDARQARVA 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
            +P    +   P  +   L++E+YS
Sbjct: 179 ALPD---ETSIPFPIAVQLIIEYYS 200


>gi|118626073|emb|CAL39340.1| small ribosomal protein 4 [Gymnomitrion corallioides]
          Length = 202

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKSKQKSQSIITKNVNLFQKLKIPGHLTFDSIELRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200


>gi|58616917|ref|YP_196116.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Gardel]
 gi|75432767|sp|Q5FH70|RS4_EHRRG RecName: Full=30S ribosomal protein S4
 gi|58416529|emb|CAI27642.1| 30S ribosomal protein S4 [Ehrlichia ruminantium str. Gardel]
          Length = 202

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 94/199 (47%), Positives = 131/199 (65%), Gaps = 2/199 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G +LWGR K P NTR+Y PG HG     KPS FG Q  A +K K YY  IS 
Sbjct: 6   KYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFGAHKKFKFYYA-ISS 64

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+ R++F +A + +GDT  N +  LES L +++Y +  VPTIF+ARQ ++H+HVLVNG+ 
Sbjct: 65  KQMRNMFLKAYKKKGDTGDNFVGLLESMLSSVLYNSGLVPTIFSARQLISHKHVLVNGKV 124

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI SY  K GD I++++K+  L SVL A    E+ VP+Y+ V+       ++R+P   +
Sbjct: 125 VNISSYSVKPGDTIKLREKAVNLPSVLAAIDAQEQKVPDYLEVDVKERSVKYLRVPKYYE 184

Query: 188 DVPYPVIMQPNLVVEFYSR 206
            VPYP  M+ NLV+EFYSR
Sbjct: 185 -VPYPANMEVNLVIEFYSR 202


>gi|118626101|emb|CAL39352.1| small ribosomal protein 4 [Sphenolobopsis pearsonii]
          Length = 202

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD I ++ K +  + +     L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNNTVDIPSYNCESGDTITIRNKQRSQSMITNNINLFQKSKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|297537975|ref|YP_003673744.1| 30S ribosomal protein S4 [Methylotenera sp. 301]
 gi|297257322|gb|ADI29167.1| ribosomal protein S4 [Methylotenera sp. 301]
          Length = 205

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    + KI R +G +L G  +  +  R   PG HG +  + + S +G++L+ KQK++
Sbjct: 1   MSRLTGPRLKIMRSLGVDLPGLSRKTIEARPTPPGQHGMKAMRRRKSDYGVKLQEKQKLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG ++E++ R +  EA +    T  N +  LE RLD +V+RA F P+  +ARQ V H 
Sbjct: 61  FNYG-LTERQMRRLIIEARKGSEPTGDNFLQLLERRLDNVVFRAGFAPSAISARQLVTHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV++NGRSVNI S R K  D I +K  S ++  V+E       D P+++  +  +     
Sbjct: 120 HVILNGRSVNIPSIRVKLADEISLKVTSLKIPLVIETLAKPVLDRPDWLQWDETDKRIKV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205
             +P + +    P  +    VVE+YS
Sbjct: 180 AHLPDADQ---VPFPIDVQQVVEYYS 202


>gi|253997477|ref|YP_003049541.1| 30S ribosomal protein S4 [Methylotenera mobilis JLW8]
 gi|253984156|gb|ACT49014.1| ribosomal protein S4 [Methylotenera mobilis JLW8]
          Length = 205

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 119/205 (58%), Gaps = 5/205 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    + K+ R +G +L G  +  +  R   PG HG +  + + S FG++L  KQK++
Sbjct: 1   MSRFIGPRLKVMRALGIDLPGLSRKTIEARPTPPGQHGNKASRKRRSDFGVKLLEKQKIR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG ++E + R +  +A + +  T   L+  LE R+D +V+RA F PT+ AARQ V+H 
Sbjct: 61  FNYG-LTETQMRRLILDARKGKEPTGERLLQLLERRMDNVVFRAGFAPTVIAARQLVSHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+++NG+  NI S R   GD I +K KSK +  V+E  +    + PE+++   D  +A  
Sbjct: 120 HLMLNGKPANIPSIRLNVGDEISIKAKSKNIPMVVETIKQPALERPEWLAWEADKQLAKV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
             +P+ + DVP+PV +   LVVE+Y
Sbjct: 180 AHLPA-ITDVPFPVDV--QLVVEYY 201


>gi|118626021|emb|CAL41740.1| small ribosomal protein 4 [Syzygiella autumnalis]
          Length = 202

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  S+   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTFKSKSSF---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRFGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD I ++ K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKIKIPSHLTFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|118626083|emb|CAL39345.1| small ribosomal protein 4 [Pseudomarsupidium decipiens]
          Length = 202

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTEQQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ G++I +K K K    + +   L +   +P +++++   ++   
Sbjct: 117 ISVNNDMVDIPSYNCEPGNIITIKNKRKSQLIITKNINLFQNLKIPSHLTLDSIQLLGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|166092890|gb|ABY82404.1| ribosomal protein S4 [Viscaria vulgaris]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K    +     L+   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRTLIKNFIDLSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|75764761|ref|ZP_00744159.1| SSU ribosomal protein S4P [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487751|gb|EAO51569.1| SSU ribosomal protein S4P [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 212

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK++ 
Sbjct: 1   MARYTGPAWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPNQRKKLSEYGLQLQEKQKLRH 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++FR  F +A +  G    N +  LE+RLD +VYR     T  AARQ VNH H
Sbjct: 60  MYG-MTERQFRRTFDQAGKMPGKHGENFMILLEARLDNLVYRMGLARTRRAARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++V+G  V+I SYR K    I V++KS  L  V EA ++    VPEY++ + D + AT+ 
Sbjct: 119 IMVDGARVDIPSYRVKPNQTISVREKSNSLVVVKEAIEV-NNFVPEYLTFDADKLEATYT 177

Query: 181 RIPSSLK 187
           R     +
Sbjct: 178 RHAERAE 184


>gi|292559510|ref|YP_003540933.1| 30S ribosomal protein S4 [Phoenix dactylifera]
 gi|290790918|gb|ADD63173.1| 30S ribosomal protein S4 [Phoenix dactylifera]
 gi|294620579|gb|ADF28148.1| 30S ribosomal protein S4 [Phoenix dactylifera]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +          ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|290487066|gb|ADD29917.1| ribosomal protein S4 [Ehretia acuminata]
          Length = 201

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K    +  +   +  + +P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRTLIQNSLDSSPHEGLPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118625971|emb|CAL39307.1| small ribosomal protein 4 [Gymnocoleopsis multiflora]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSISNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVSIARKAKGSTGQVLLQLLEMRLDNTIFRLGIAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SY C+ GD+I +K K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ILVNSNLVDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +      + +   LVVE+YSR
Sbjct: 177 NQ---RVNREWVNLKINELLVVEYYSR 200


>gi|262400804|gb|ACY66293.1| ribosomal protein S4 [Brassica napus]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V    +  A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLESSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|296168684|ref|ZP_06850433.1| 30S ribosomal protein S4 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896593|gb|EFG76234.1| 30S ribosomal protein S4 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPITRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLRILESRLDNVVYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+I+V+  S        A + A +R +P ++ V  +      
Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDVRDGSLNTVPFQIARETAGDRPIPSWLQVVGERQRILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VEFYS+
Sbjct: 178 HQLPERAQ---IDVPLAEQLIVEFYSK 201


>gi|157689422|gb|ABV65267.1| ribosomal protein S4 [Berberidopsis corallina]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSKALIQNYLDSSPHEELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|110456717|gb|ABG74820.1| ribosomal protein S4 [Jasminum subhumile]
          Length = 203

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KSP      G  L  Q R  K S + ++L  KQK+  
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKSP----KAGSDLRKQSRSRKKSQYRIRLEEKQKLCF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG + E +     + A +++G T   L+  LE RLD I++R     TI AARQ V HRH
Sbjct: 57  HYG-LREYQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVTHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+  SYRCK  D+I  K   K    +  +   +  +++P +++++        
Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|41323115|gb|AAR99787.1| small ribosomal protein 4 [Plagiochila frondescens]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IERSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMCIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSVVTKNINSFQKLKIPSHLTFDSTQLPGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|323149221|ref|YP_004222050.1| ribosomal protein S4 [Coccomyxa sp. C-169]
 gi|317467277|gb|ADV29898.1| ribosomal protein S4 [Coccomyxa sp. C-169]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+GE     PK P   +   PG HG+  K    Y G++L+ KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRLGELPGLTPKLP--KKQAPPGQHGKTPKKLSQY-GIRLQEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E +     +EA R +G T   L+  LE RLD  V+R    PTI AARQ + H H
Sbjct: 58  NYG-ITESQLIRYVREARRVKGSTGEILLQLLEMRLDNTVFRLGIAPTIAAARQLIRHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           VLVN +   I SY+CK  D + ++Q+ +    V       ++  +P ++S   D +    
Sbjct: 117 VLVNNQKTTIPSYQCKGKDAVSIQQRKQSRELVARFMADASQSSLPPHLSFTKDTLTGVV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVEFYSR
Sbjct: 177 ATSIDRQ---SVGLKLNELLVVEFYSR 200


>gi|139389644|ref|YP_001123201.1| ribosomal protein S4 [Arabis hirsuta]
 gi|139390154|ref|YP_001123727.1| ribosomal protein S4 [Lobularia maritima]
 gi|152060545|sp|A4QK20|RR4_ARAHI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|152060554|sp|A4QLJ6|RR4_LOBMA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286399|dbj|BAF50025.1| ribosomal protein S4 [Arabis hirsuta]
 gi|134286931|dbj|BAF50551.1| ribosomal protein S4 [Lobularia maritima]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|86438902|emb|CAJ55413.1| small ribosomal protein 4 [Plagiochila nobilis]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ G++I ++ + K  +++ +     ++  VP +++ +   +  + 
Sbjct: 117 ISINDDIVDIPSYNCEPGEIITIRNRQKSQSAITKNINSFQKLKVPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + ++  LVVE+YSR
Sbjct: 177 NQMINR---EWINLKIKELLVVEYYSR 200


>gi|210624083|ref|ZP_03294183.1| hypothetical protein CLOHIR_02139 [Clostridium hiranonis DSM 13275]
 gi|210153216|gb|EEA84222.1| hypothetical protein CLOHIR_02139 [Clostridium hiranonis DSM 13275]
          Length = 198

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59
           M+K    + K  RR+G N+ G PK+            G  R  K  S +G QL  KQ++K
Sbjct: 1   MAKMMGPRFKQCRRLGLNVCGHPKAMDRA------ERGTSRADKKLSPYGTQLLEKQRLK 54

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG + EK+F +   +A++S+  T   LI  LE RLD IVYR     +I  ARQ V H 
Sbjct: 55  AYYGVL-EKQFANYVHKAEKSKESTGTVLIQLLECRLDNIVYRLGLASSIRQARQMVVHG 113

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LVNG+ V+  S+    GDV+ +++KS+  A   E  + +E +   YI  N +    T 
Sbjct: 114 HILVNGKKVDRPSFGLNVGDVVSLREKSQSNAMFKENFENSELNTLPYIEKNMEKFSGTL 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ P   +    P+ +   LVVE+YS+
Sbjct: 174 IKRPERNE---IPIEINEILVVEYYSK 197


>gi|15610594|ref|NP_217975.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Rv]
 gi|15843053|ref|NP_338090.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis CDC1551]
 gi|31794634|ref|NP_857127.1| 30S ribosomal protein S4 [Mycobacterium bovis AF2122/97]
 gi|121639378|ref|YP_979602.1| 30S ribosomal protein S4 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663323|ref|YP_001284846.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Ra]
 gi|148824668|ref|YP_001289422.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis F11]
 gi|167966775|ref|ZP_02549052.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Ra]
 gi|215405497|ref|ZP_03417678.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 02_1987]
 gi|215413372|ref|ZP_03422056.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 94_M4241A]
 gi|215428965|ref|ZP_03426884.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T92]
 gi|215432429|ref|ZP_03430348.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis EAS054]
 gi|215447795|ref|ZP_03434547.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T85]
 gi|218755236|ref|ZP_03534032.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis GM 1503]
 gi|219559526|ref|ZP_03538602.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T17]
 gi|224991874|ref|YP_002646563.1| 30S ribosomal protein S4 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800503|ref|YP_003033504.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 1435]
 gi|254366059|ref|ZP_04982104.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552561|ref|ZP_05143008.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188513|ref|ZP_05765987.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis CPHL_A]
 gi|260202641|ref|ZP_05770132.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T46]
 gi|260206829|ref|ZP_05774320.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis K85]
 gi|289445058|ref|ZP_06434802.1| SSU ribosomal protein S4 [Mycobacterium tuberculosis T46]
 gi|289449162|ref|ZP_06438906.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis CPHL_A]
 gi|289555729|ref|ZP_06444939.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 605]
 gi|289571692|ref|ZP_06451919.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T17]
 gi|289576194|ref|ZP_06456421.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis K85]
 gi|289747291|ref|ZP_06506669.1| ribosomal protein S4 [Mycobacterium tuberculosis 02_1987]
 gi|289752182|ref|ZP_06511560.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T92]
 gi|289755591|ref|ZP_06514969.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis EAS054]
 gi|289759621|ref|ZP_06518999.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T85]
 gi|289763640|ref|ZP_06523018.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis GM 1503]
 gi|297636117|ref|ZP_06953897.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis KZN 4207]
 gi|297733117|ref|ZP_06962235.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis KZN R506]
 gi|298526942|ref|ZP_07014351.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 94_M4241A]
 gi|306777805|ref|ZP_07416142.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu001]
 gi|306782524|ref|ZP_07420861.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu002]
 gi|306786343|ref|ZP_07424665.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu003]
 gi|306790712|ref|ZP_07429034.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu004]
 gi|306795240|ref|ZP_07433542.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu005]
 gi|306799430|ref|ZP_07437732.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu006]
 gi|306805276|ref|ZP_07441944.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu008]
 gi|306809462|ref|ZP_07446130.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu007]
 gi|306969570|ref|ZP_07482231.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu009]
 gi|306973924|ref|ZP_07486585.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu010]
 gi|307081633|ref|ZP_07490803.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu011]
 gi|307086239|ref|ZP_07495352.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu012]
 gi|313660448|ref|ZP_07817328.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis KZN V2475]
 gi|6094181|sp|O06325|RS4_MYCTU RecName: Full=30S ribosomal protein S4
 gi|32700063|sp|P45811|RS4_MYCBO RecName: Full=30S ribosomal protein S4
 gi|152112232|sp|A1KPE4|RS4_MYCBP RecName: Full=30S ribosomal protein S4
 gi|172047916|sp|A5U8D4|RS4_MYCTA RecName: Full=30S ribosomal protein S4
 gi|254764600|sp|C1AHR6|RS4_MYCBT RecName: Full=30S ribosomal protein S4
 gi|2104381|emb|CAB08724.1| PROBABLE 30S RIBOSOMAL PROTEIN S4 RPSD [Mycobacterium tuberculosis
           H37Rv]
 gi|13883397|gb|AAK47904.1| ribosomal protein S4 [Mycobacterium tuberculosis CDC1551]
 gi|31620231|emb|CAD95674.1| PROBABLE 30S RIBOSOMAL PROTEIN S4 RPSD [Mycobacterium bovis
           AF2122/97]
 gi|121495026|emb|CAL73512.1| Probable 30S ribosomal protein S4 rpsD [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|134151572|gb|EBA43617.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507475|gb|ABQ75284.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis H37Ra]
 gi|148723195|gb|ABR07820.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis F11]
 gi|224774989|dbj|BAH27795.1| 30S ribosomal protein S4 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322006|gb|ACT26609.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 1435]
 gi|289417977|gb|EFD15217.1| SSU ribosomal protein S4 [Mycobacterium tuberculosis T46]
 gi|289422120|gb|EFD19321.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis CPHL_A]
 gi|289440361|gb|EFD22854.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 605]
 gi|289540625|gb|EFD45203.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis K85]
 gi|289545446|gb|EFD49094.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T17]
 gi|289687819|gb|EFD55307.1| ribosomal protein S4 [Mycobacterium tuberculosis 02_1987]
 gi|289692769|gb|EFD60198.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis T92]
 gi|289696178|gb|EFD63607.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis EAS054]
 gi|289711146|gb|EFD75162.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis GM 1503]
 gi|289715185|gb|EFD79197.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis T85]
 gi|298496736|gb|EFI32030.1| 30S ribosomal protein S4 [Mycobacterium tuberculosis 94_M4241A]
 gi|308213890|gb|EFO73289.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu001]
 gi|308324841|gb|EFP13692.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu002]
 gi|308329095|gb|EFP17946.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu003]
 gi|308332903|gb|EFP21754.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu004]
 gi|308336563|gb|EFP25414.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu005]
 gi|308340438|gb|EFP29289.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu006]
 gi|308344302|gb|EFP33153.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu007]
 gi|308348193|gb|EFP37044.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu008]
 gi|308352917|gb|EFP41768.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu009]
 gi|308356760|gb|EFP45611.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu010]
 gi|308360705|gb|EFP49556.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu011]
 gi|308364320|gb|EFP53171.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis SUMu012]
 gi|323717942|gb|EGB27131.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis CDC1551A]
 gi|326905304|gb|EGE52237.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis W-148]
 gi|328460234|gb|AEB05657.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis KZN 4207]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+++V+ KS        A + A ER +P ++ V  +      
Sbjct: 118 FNVNGVHVNVPSYRVSQYDIVDVRDKSLNTVPFQIARETAGERPIPSWLQVVGERQRVLI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE+YS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEYYSK 201


>gi|41323107|gb|AAR99783.1| small ribosomal protein 4 [Plagiochila diversifolia]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNYIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|166092893|gb|ABY82406.1| ribosomal protein S4 [Petrocoptis pyrenaica]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199


>gi|302337501|ref|YP_003802707.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293]
 gi|301634686|gb|ADK80113.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293]
          Length = 211

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 9/213 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    + ++ R     L+ +       K P+  +   PG   + R  K S +G+QLR 
Sbjct: 1   MARYVGPQCRLCRAEKTKLFLKGERCHTGKCPIAKKKNPPGKGPRFRARKMSDYGIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+++ YG + EK+F+  F EA+R RG T  NLI  LE RLD +VYR +F  +   ARQ
Sbjct: 61  KQKLRRMYG-LLEKQFKLTFVEAERLRGKTGENLIILLERRLDNVVYRLRFANSRKQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173
            V+H H+LVNG+ V I SY  ++GD IE+++ SK++  + +A  +  +  V  +I ++ D
Sbjct: 120 LVSHGHILVNGKRVTIPSYVVRQGDEIEIREASKKMVVIKDALKEYTKSGVMPWIMLDPD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M  +   IP           +   L+VE YSR
Sbjct: 180 AMKGSLSAIPRRNDVTDLS-DVNEQLIVELYSR 211


>gi|309812264|ref|ZP_07706019.1| ribosomal protein S4 [Dermacoccus sp. Ellin185]
 gi|308433569|gb|EFP57446.1| ribosomal protein S4 [Dermacoccus sp. Ellin185]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G  K+    R + PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPITKKSRRLKTDLVGGDKN-FEMRPFPPGQHGRGRIQEKEYLH-QLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   +KEA R  G T  NL+  LESRLD ++YRA    T  AARQ V H H
Sbjct: 59  TYG-VMEKQFVRYYKEAARRPGKTGENLLIILESRLDNVIYRAGLARTRRAARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG  V++ SYR ++ D+I V++KS++   +  A +   ER VP ++ V    +    
Sbjct: 118 FEVNGVRVDVPSYRVEQYDIITVREKSREAFPIQLARETFGERPVPAWLHVVPGTLQVLI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+  +       +   L+VE YS+
Sbjct: 178 HQLPTREQ---IDSQLTEQLIVELYSK 201


>gi|307718230|ref|YP_003873762.1| 30S ribosomal protein S4 [Spirochaeta thermophila DSM 6192]
 gi|306531955|gb|ADN01489.1| 30S ribosomal protein S4 [Spirochaeta thermophila DSM 6192]
          Length = 211

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 114/213 (53%), Gaps = 9/213 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +    + ++ R  G  L+ +      PK  +      PG     R  KPS + +QLR 
Sbjct: 1   MGRYIGPQCRLCRAEGRKLFLKGERCYTPKCAMAKNRPKPGKAQYARMRKPSNYAIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ Y ++SE +FR  F  A++  G T  NLI  LE RLD IVYR  F  +   ARQ
Sbjct: 61  KQKLKRLY-NMSEAQFRRFFHMAEKMPGKTGDNLIILLERRLDNIVYRMHFASSRKQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173
            V H HVLVNGR VNI SY  +EGD +E+++KSK+L    E+  +     V  ++ V+ D
Sbjct: 120 IVGHGHVLVNGRKVNIPSYLVREGDRVEIREKSKKLLVFKESLKEYTRSGVMSWLEVDPD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V T   IP           ++ NL+VE YS+
Sbjct: 180 NLVGTVKMIPMRSDITDL-ADIKENLIVELYSK 211


>gi|48527409|gb|AAT45837.1| small ribosomal protein 4 [Plagiochila retrorsa]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|297840979|ref|XP_002888371.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
 gi|297334212|gb|EFH64630.1| ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTSKRP----KAGSDLRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|41323089|gb|AAR99774.1| small ribosomal protein 4 [Plagiochila bifaria]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYSCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|41323119|gb|AAR99789.1| small ribosomal protein 4 [Plagiochila magna]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  + K  ++V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNEQKSRSTVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|254234050|ref|ZP_04927375.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis C]
 gi|124599579|gb|EAY58683.1| 30S ribosomal protein S4 rpsD [Mycobacterium tuberculosis C]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+++V+ KS        A + A ER +P ++ V  +      
Sbjct: 118 FNVNGAHVNVPSYRVSQYDIVDVRDKSLNTVPFQIARETAGERPIPSWLQVVGERQRVLI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE+YS+
Sbjct: 178 HQLPERAQ---IDVPLTEQLIVEYYSK 201


>gi|167391807|ref|YP_001671685.1| ribosomal protein S4 [Carica papaya]
 gi|166344134|gb|ABY86784.1| ribosomal protein S4 [Carica papaya]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       + P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSQRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRMGMALTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I VK + K  A +      +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDTITVKDEQKSRALIQSFLDSSTHEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---WVGLKINELLVVEYYSR 199


>gi|41323123|gb|AAR99791.1| small ribosomal protein 4 [Plagiochila pulcherrima]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IERSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMCIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +      +  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKNINSFHKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|118626165|emb|CAL39380.1| small ribosomal protein 4 [Anastrophyllum minutum var. minutum]
          Length = 202

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY C+ GD+I ++ K K  +   +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIXSYNCEPGDIITIRXKQKSQSIXTKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|121720615|ref|YP_001001536.1| ribosomal protein S4 [Nuphar advena]
 gi|69216106|gb|AAZ03891.1| ribosomal protein S4 [Nuphar advena]
 gi|84682206|gb|ABC60460.1| ribosomal protein S4 [Nuphar advena]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P         L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKP----RSASDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A ++ G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLRYVRIAGKANGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +      +   ++P++++++        
Sbjct: 116 ILVNGRLVDIPSYRCKPRDIITTKDKQRSRALIQNHMDSSSNAELPKHLTLHSLQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   L+VE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLIVEYYSR 199


>gi|166092875|gb|ABY82394.1| ribosomal protein S4 [Silene aegyptiaca]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGLVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199


>gi|315186307|gb|EFU20068.1| SSU ribosomal protein S4P [Spirochaeta thermophila DSM 6578]
          Length = 211

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 115/213 (53%), Gaps = 9/213 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +    + ++ R  G  L+ +      PK  +      PG     R  KPS + +QLR 
Sbjct: 1   MGRYIGPQCRLCRAEGRKLFLKGERCYTPKCAMTKNRPKPGKAQYARMRKPSNYAIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ Y ++SE +FR  F  A++  G T  NLI  LE RLD IVYR  F  +   ARQ
Sbjct: 61  KQKLKRLY-NMSEAQFRRFFHMAEKMPGRTGDNLIILLERRLDNIVYRMHFASSRKQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHD 173
            V+H HVLVNGR VNI SY  +EGD +E+++KSK+L    E+  +     V  ++ V+ D
Sbjct: 120 IVDHGHVLVNGRKVNIPSYIVREGDRVEIREKSKKLLVFKESLKEYTRSGVMAWLEVDPD 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+V T   IP           ++ NL+VE YS+
Sbjct: 180 NLVGTVKMIPMRSDITDL-ADIKENLIVELYSK 211


>gi|48527413|gb|AAT45839.1| small ribosomal protein 4 [Plagiochila rutilans]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLNINELLVVEYYSR 200


>gi|118627510|emb|CAL39389.1| small ribosomal protein 4 [Harpanthus flotovianus]
 gi|118627530|emb|CAL41760.1| small ribosomal protein 4 [Geocalyx graveolens]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKVIRRLGALPGLTSKTLKPKSSY---VDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ N   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFNSIELRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200


>gi|118627518|emb|CAL39393.1| small ribosomal protein 4 [Calypogeia integristipula]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K      SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R +G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I V++K K  + + +   + ++  +P +++++   +    
Sbjct: 117 ISINNNIVDIPSYNCEPGDIITVREKQKSQSIITKNINVFQKLKIPSHLTIDSTELRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWIDLKINELLVVEYYSR 200


>gi|283794865|ref|YP_003359218.1| ribosomal protein S4 [Cryptomonas paramecium]
 gi|253981837|gb|ACT46754.1| ribosomal protein S4 [Cryptomonas paramecium]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   +  +I RR G       K+    R + PG HG + +    Y  ++L  KQK+K 
Sbjct: 1   MSRYRGAALRIVRRFGSLPGLTRKTT--NRKHRPGQHGSKHRRLSEY-AIRLDEKQKIKF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++  +  K+A R +G T   L+  LE RLD  V+R    PTI AARQ V H H
Sbjct: 58  NYG-LSERQLFNYVKKARRIQGSTGQALLQLLEMRLDNTVFRLGMAPTIPAARQLVTHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + +N + V+I SY+C  GD+I++K   K    V +        + P ++ ++        
Sbjct: 117 IYLNTKRVSIPSYQCSAGDIIKIKDSPKSKKLVTDYISFPGLANAPTHLELDKTTFTGVV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   LVVE YSR
Sbjct: 177 KGIVER---EWVGINLNELLVVEHYSR 200


>gi|139389266|ref|YP_001123032.1| ribosomal protein S4 [Aethionema grandiflorum]
 gi|152060543|sp|A4QJK1|RR4_AETGR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286228|dbj|BAF49856.1| ribosomal protein S4 [Aethionema grandiflorum]
          Length = 201

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPKHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|118627502|emb|CAL39385.1| small ribosomal protein 4 [Douinia ovata]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN  +V+I SY  + GD+I +  + K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDTVDIPSYNREPGDIITIGNRRKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|118626031|emb|CAL41742.1| small ribosomal protein 4 [Marsupella aquatica]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + V+   V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVDNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIELRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWINLKINELLVVEYYSR 200


>gi|166092878|gb|ABY82396.1| ribosomal protein S4 [Silene atocioides]
          Length = 201

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQARSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNFIDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199


>gi|157689514|gb|ABV65313.1| ribosomal protein S4 [Liquidambar styraciflua]
          Length = 201

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRHQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A V      + R ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALVQNYLASSPREELPNHLTLHLFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199


>gi|242624335|ref|YP_003002253.1| 30S ribosomal protein S4 [Aureoumbra lagunensis]
 gi|239997443|gb|ACS36965.1| 30S ribosomal protein S4 [Aureoumbra lagunensis]
          Length = 204

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/209 (36%), Positives = 113/209 (54%), Gaps = 9/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    K +I RR+GE      K  V TR   PG H Q R  ++  S + ++L+ KQK+
Sbjct: 1   MSRYRGPKIRIVRRLGELPGLTTK--VTTRETLPGQHRQSRLQRNNSSSYSIRLQEKQKL 58

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG ++EK+  +  KEA R RG T   L+  LE RLD IV+R     TI A+RQ +NH
Sbjct: 59  RYNYG-LTEKQLFAYVKEAKRLRGATGSVLMQLLEMRLDNIVFRLGLANTIPASRQIINH 117

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
            H+ VN R V+I S++C   D+IEVK K      V +  +  + + VP+Y+    D +  
Sbjct: 118 GHICVNDRKVDIPSFQCHPNDIIEVKNKQTSKQVVSKFLEKTDVKPVPDYLEFERDKIRG 177

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R+  S +     + +   LVVE+YSR
Sbjct: 178 KVKRVIESRE---ANIDINELLVVEYYSR 203


>gi|66990670|emb|CAI29113.1| small ribosomal protein 4 [Plagiochila streimannii]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIIAIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200


>gi|66990668|emb|CAI29112.1| small ribosomal protein 4 [Plagiochila teysmannii]
          Length = 202

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNITSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWIDLKINELLVVEYYSR 200


>gi|189162273|ref|YP_001936519.1| ribosomal protein S4 [Fagopyrum esculentum subsp. ancestrale]
 gi|166065359|gb|ABY79734.1| ribosomal protein S4 [Fagopyrum esculentum subsp. ancestrale]
          Length = 198

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P + R+         R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPRDLRN-------PSRSGKRSQYRIRLEEKQKLRF 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++    F+ A +++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 54  HYG-ITERQLLKYFRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D++  + K K  A V      +   ++P++++++        
Sbjct: 113 VLVNGRIVDIPSYRCKPNDIVMSRDKQKSKALVQNYLDSSHSEELPKHLTLHPFPYKGVV 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 173 NQIIDNK---WVGLKINELLVVEYYSR 196


>gi|74027103|gb|AAZ94653.1| ribosomal protein S4 [Cucumis sativus]
 gi|115432806|gb|ABI97419.1| ribosomal protein S4 [Cucumis sativus]
 gi|115498306|gb|ABI98748.1| ribosomal protein S4 [Cucumis sativus]
          Length = 201

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KTGNDLKNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K + K    +      +  +++P+++++         
Sbjct: 116 ILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199


>gi|84494745|ref|ZP_00993864.1| 30S ribosomal protein S4 [Janibacter sp. HTCC2649]
 gi|84384238|gb|EAQ00118.1| 30S ribosomal protein S4 [Janibacter sp. HTCC2649]
          Length = 202

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G  K+  + R + PG HG+RR  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPITKKSRRLRVDLVGGDKN-FDLRPFPPGQHGRRRMQEKEYL-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +KEA    G T  N+++ LESRLD ++YRA    T  AARQ V H H
Sbjct: 59  TYG-VMEKQFRRYYKEAANRPGKTGENILTILESRLDNVIYRAGLARTRRAARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ V++ SYR ++ D+I V+++S +   +  A +   +R  P ++ V   ++    
Sbjct: 118 FEVNGKRVDVPSYRVEQYDIITVRKQSVETFPLQLARETFGDRPTPAWLQVVPGSLQILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +      I+   L+VEFYS+
Sbjct: 178 HSLPIRAQ---IDSILTEQLIVEFYSK 201


>gi|169794075|ref|YP_001718439.1| ribosomal protein S4 [Manihot esculenta]
 gi|157695887|gb|ABV66156.1| ribosomal protein S4 [Manihot esculenta]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-VTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      + + ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRAMIQNDLDSSPQEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|52220812|ref|YP_086968.1| ribosomal protein S4 [Panax ginseng]
 gi|62287232|sp|Q68S04|RR4_PANGI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|51235315|gb|AAT98511.1| ribosomal protein S4 [Panax ginseng]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + +      +  +   +   ++P++++++        
Sbjct: 116 ILVNGRIVDIASYRCKPRDIITARDEENSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|326909395|ref|YP_004327664.1| ribosomal protein S4 [Hevea brasiliensis]
 gi|308523509|gb|ADO33559.1| ribosomal protein S4 [Hevea brasiliensis]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KVGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      + + ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARAEQKSRAMIKNYLDSSPQEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|326200283|gb|ADZ52322.1| ribosomal protein S4 [Asclepias syriaca]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTNKRP----RAGNDPRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI AARQFVNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQFVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK GD+I VK + K  A + ++    + +++P ++ +         
Sbjct: 116 ILVNGHIVDIPSYRCKPGDIITVKDEQKSKALIQKSLDSSSHQELPSHLILQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + ++  LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKIKELLVVEYYSR 199


>gi|48527371|gb|AAT45818.1| small ribosomal protein 4 [Plagiochila ensiformis]
          Length = 202

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + + +     +R  +P ++  +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIITKNINSFQRLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|139389952|ref|YP_001123552.1| ribosomal protein S4 [Draba nemorosa]
 gi|152060551|sp|A4QL21|RR4_DRANE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286754|dbj|BAF50376.1| ribosomal protein S4 [Draba nemorosa]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDPRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V      +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSTPEELPNHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|24213464|ref|NP_710945.1| 30S ribosomal protein S4 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658677|ref|YP_002763.1| 30S ribosomal protein S4 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|26454650|sp|Q9XD10|RS4_LEPIN RecName: Full=30S ribosomal protein S4
 gi|61215619|sp|Q72NI7|RS4_LEPIC RecName: Full=30S ribosomal protein S4
 gi|24194236|gb|AAN47963.1| 30S ribosomal protein S4 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601921|gb|AAS71400.1| 30S ribosomal protein S4 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 207

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT----RSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      KI RR G +L+ +     N     R   PG+   +RK K S +G QLR KQ
Sbjct: 1   MARYRGPVVKIMRREGVDLFLKSSYTFNKDKFHRKGPPGMP-TKRKGKVSEYGAQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  ++EA  + G T   L+  LE RLD +VYR  F  T   AR F+
Sbjct: 60  KLKRAYG-LLEKQFRRYYEEASHAHGVTGEILLQLLERRLDNVVYRLGFAITRRQARNFI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174
            HRH+LVNG  V+I SYR   GD +E+++K K  + + +  +L++  + +P ++S ++ N
Sbjct: 119 AHRHILVNGERVDIPSYRLNVGDKVEIREKFKTSSFIADNIKLSQSLQGIPSWLSADYTN 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +P         + ++  ++VE YS+
Sbjct: 179 FGGDVTALPERHH---IDLPVKEQVIVELYSK 207


>gi|75755661|ref|YP_319767.1| ribosomal protein S4 [Acorus calamus]
 gi|161622312|ref|YP_001586184.1| ribosomal protein S4 [Acorus americanus]
 gi|90101657|sp|Q3V532|RR4_ACOCL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|69216102|gb|AAZ03889.1| ribosomal protein S4 [Acorus americanus]
 gi|74381711|emb|CAI53796.1| ribosomal protein S4 [Acorus calamus]
 gi|160369855|gb|ABX38746.1| ribosomal protein S4 [Acorus americanus]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K        G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTSKGT----RPGSDLRNQFRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +    +      + R ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKVLIQNNMDSSTREELPKHLTLDSFQHKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|119713705|gb|ABL97755.1| ribosomal protein S4 [uncultured marine bacterium EB0_41B09]
          Length = 191

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 112/192 (58%), Positives = 145/192 (75%), Gaps = 1/192 (0%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +GEN+WGR   P NTR+YGPG HG +   + S +G+QLR KQK+K YYG+I EK+FR+IF
Sbjct: 1   MGENIWGRENCPTNTRTYGPGQHGPKGVRRRSDYGVQLREKQKLKGYYGNIGEKQFRNIF 60

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           KEA  S+GDTS NL+  LESRLD IVYR+ FVPT+FAARQF+NH+HV VNG  VNI SY+
Sbjct: 61  KEAAASKGDTSENLLVLLESRLDAIVYRSNFVPTVFAARQFINHKHVKVNGSVVNIASYK 120

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           CK GD I+V +KS+    V+++ Q  ERD+PEYI+++     AT++R PSS + +PYP +
Sbjct: 121 CKPGDEIQVNEKSRSFPFVIDSVQKLERDLPEYINLDVKEFKATYIRYPSSDE-IPYPTM 179

Query: 195 MQPNLVVEFYSR 206
           M P  VVEFYSR
Sbjct: 180 MSPGSVVEFYSR 191


>gi|118625935|emb|CAL39289.1| small ribosomal protein 4 [Jamesoniella oenops]
          Length = 202

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD I ++ K K  + + + + L ++  +P ++  +   +    
Sbjct: 117 ISVNKGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKVKIPSHLIFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|139390350|ref|YP_001122948.1| ribosomal protein S4 [Aethionema cordifolium]
 gi|152060542|sp|A4QJB7|RR4_AETCO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134286143|dbj|BAF49772.1| ribosomal protein S4 [Aethionema cordifolium]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK +      V       A  ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPKHLTLHTFQYEGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDRK---CVGLKINELLVVEYYSR 199


>gi|149390356|ref|YP_001294354.1| ribosomal protein S4 [Dioscorea elephantipes]
 gi|172048696|sp|A6MMK9|RR4_DIOEL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|148668048|gb|ABR01432.1| ribosomal protein S4 [Dioscorea elephantipes]
          Length = 201

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDFKNQSRFGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTEQQLLRYVHIAGKAKGSTDQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +    +  + + +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITSKDKQRSKVLIQNSIESSPHEELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---LIGLKINELLVVEYYSR 199


>gi|85057521|ref|YP_456437.1| 30S ribosomal protein S4 [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123518331|sp|Q2NJN5|RS4_AYWBP RecName: Full=30S ribosomal protein S4
 gi|84789626|gb|ABC65358.1| SSU ribosomal protein S4P [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 198

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  K+ RR+  ++    K  ++ R+YGPG HGQ +K K S +G QL+ KQK++ 
Sbjct: 1   MSRYTGSLWKVSRRLNYSVSETGKE-LHKRAYGPGQHGQ-KKVKLSDYGFQLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FR  F  A + +G      +  LESRLD +VYR  F  T   ARQ VNH H
Sbjct: 59  TYG-VSEKQFRKTFDNASKLKGIHGEMFLVLLESRLDNVVYRLGFAKTRAQARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SYR K G  + +++KSK L  V EA   ++    +Y+S++ + +V  +V
Sbjct: 118 ILVDGKKVDIASYRLKPGQTVTLREKSKNLNIVQEALN-SKFVRADYVSLDKE-LVGKYV 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   + +P    +   L+VE+Y+R
Sbjct: 176 RYPQRNEFLP---DINEQLIVEYYNR 198


>gi|48527393|gb|AAT45829.1| small ribosomal protein 4 [Plagiochila ovata]
          Length = 202

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A + +G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKVKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSTITKNINSFQKLKIPSHLNFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LVVE+YSR
Sbjct: 177 NQIINR---EWINLKINELLVVEYYSR 200


>gi|41323135|gb|AAR99797.1| small ribosomal protein 4 [Plagiochila stricta]
          Length = 202

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +K K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|118625995|emb|CAL39319.1| small ribosomal protein 4 [Mnioloma fuscum]
          Length = 202

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K      SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKILKTKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R +G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARRVKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I VK+K K    + +   L ++  +P +++ +   +    
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITVKKKQKSQFIIGKNLNLFQKLKIPSHLTFDPTELRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---EWIDLKINELLVVEYYSR 200


>gi|156573732|gb|ABU85198.1| ribosomal protein S4 [Anethum graveolens]
          Length = 201

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   LI  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLIQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + +    A +  +   + +D +P+++++         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|50346784|ref|YP_053157.1| ribosomal protein S4 [Nymphaea alba]
 gi|62287256|sp|Q6EW46|RR4_NYMAL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|50250329|emb|CAF28595.1| ribosomal protein S4 [Nymphaea alba]
          Length = 201

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P         L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKP----RSASDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A ++ G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLRYVRIAGKANGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K    A +      +   ++P++++++        
Sbjct: 116 ILVNGRLVDIPSYRCKPRDIITTKDKQGSRALIQNHMDSSSNAELPKHLTLHSFQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   L+VE+YSR
Sbjct: 176 NQIIDSK---WVGLKVNELLIVEYYSR 199


>gi|118626081|emb|CAL39344.1| small ribosomal protein 4 [Blepharidophyllum densifolium]
          Length = 202

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       ++     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSRTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +    
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITVKNKQKSQSIITKNIHLFQKLKIPSHLTFDSTELRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|157689576|gb|ABV65344.1| ribosomal protein S4 [Trochodendron aralioides]
          Length = 201

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNYFDSSPHEELPKHLTLHSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|157689486|gb|ABV65299.1| ribosomal protein S4 [Heuchera sanguinea]
          Length = 201

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K    +      +   ++P+Y++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRTLIQNYLDSSPHEELPKYLTLHPLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199


>gi|48527355|gb|AAT45810.1| small ribosomal protein 4 [Plagiochila asplenioides]
          Length = 202

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY           K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSYSD---RSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ITINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|48527391|gb|AAT45828.1| small ribosomal protein 4 [Plagiochila ovalifolia]
          Length = 202

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ITINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ S        + +   LVVE+YSR
Sbjct: 177 NQMISR---EWINLKINELLVVEYYSR 200


>gi|66990678|emb|CAI29117.1| small ribosomal protein 4 [Plagiochila rubescens]
          Length = 202

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNLNSFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|113170431|ref|YP_717223.1| Rps4 [Ostreococcus tauri]
 gi|122228948|sp|Q0P3N2|RR4_OSTTA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|112806838|emb|CAL36345.1| Rps4 [Ostreococcus tauri]
          Length = 197

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59
           M++    + KI RR+GE      K P   R+Y  G HG        S + ++L+ KQK++
Sbjct: 1   MARYRGPRVKIVRRLGELPGLTTKIP--NRNYPAGQHGPSSGMTKMSQYRVRLQEKQKLR 58

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SEK+  S  + A R +G T   L+  LE RLD +VYR  F PTI AARQ+V+H 
Sbjct: 59  YNYG-VSEKQLLSYVRRARRMKGPTGELLLQMLEMRLDAVVYRLGFAPTIRAARQYVSHG 117

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
            V VNG++V I SY+C  G+VI+        A ++E ++     VP ++SV+ +N     
Sbjct: 118 LVTVNGQAVTIPSYQCSVGEVIKS-----NSAPIVEHAKTFGGVVPSHLSVDKNNATGKV 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R  +  +     + +   L++EFYSR
Sbjct: 173 ERNVTRSQ---IGLTVNELLIIEFYSR 196


>gi|195952670|ref|YP_002120960.1| 30S ribosomal protein S4 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932282|gb|ACG56982.1| RNA-binding S4 domain protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 207

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGR--PKSPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQ 56
           M ++  +  K+DRR G  + G+      +  R++ PG HG+   R++K + FGL+L  KQ
Sbjct: 1   MGRKIQAWSKVDRRFGVVVSGKLSGNKILTRRNFPPGQHGRTKGRRAKSTEFGLRLNEKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K  YG + E +FR  F +A +++G+T+  +I  LE RLD +VYR     T   ARQFV
Sbjct: 61  KLKMLYGGLRESQFRKYFDKASKAKGNTASVMIELLERRLDNVVYRLGIACTRRQARQFV 120

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
            H H++VNG+ V+I SY+   GD+IEV   SK +  + +  + L  R VP ++ ++ DN 
Sbjct: 121 VHGHIMVNGKKVDIPSYQVNVGDIIEV--YSKDIPQIRQNLENLDPRSVPHWLEIDKDNF 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               V  P   KDV   V +    ++E+YSR
Sbjct: 179 RGKVVDKP---KDVVLEVPINMQYIIEYYSR 206


>gi|41323085|gb|AAR99772.1| small ribosomal protein 4 [Plagiochila adiantoides]
          Length = 202

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + + +   L ++  +P ++  +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIITKNINLFQKLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|118625989|emb|CAL39316.1| small ribosomal protein 4 [Plagiochila sp. de Roo s.n.]
          Length = 202

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|194099938|ref|YP_002003076.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae NCCP11945]
 gi|193935228|gb|ACF31052.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae NCCP11945]
 gi|316985689|gb|EFV64635.1| ribosomal protein S4 [Neisseria meningitidis H44/76]
 gi|317165390|gb|ADV08931.1| 30S ribosomal protein S4 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 196

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 78/200 (39%), Positives = 121/200 (60%), Gaps = 10/200 (5%)

Query: 12  DRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
            RR G +L+ +  +  ++++      PG HG  +K + S +GLQLR KQK+++ YG + E
Sbjct: 2   ARREGTDLFLKSARRSLDSKCKIDSAPGQHGA-KKPRLSDYGLQLREKQKIRRIYGVL-E 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++FR  F EADR +G T   L+  LESRLD +VYR  F  T   ARQ V+H+ ++VNG+ 
Sbjct: 60  RQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQV 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI S++ K GDV+ V++K+K+   + EA  LA +  +P ++SV+ D +   F  +P   
Sbjct: 120 VNIPSFQVKAGDVVSVREKAKKQVRIQEALGLATQIGLPGWVSVDADKLEGVFKNMPDRS 179

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           +       +   LVVEFYS+
Sbjct: 180 E---LTGDINEQLVVEFYSK 196


>gi|78103255|ref|YP_358580.1| ribosomal protein S4 [Phalaenopsis aphrodite subsp. formosana]
 gi|90101665|sp|Q3BAN8|RR4_PHAAO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|58802785|gb|AAW82505.1| ribosomal protein S4 [Phalaenopsis aphrodite subsp. formosana]
          Length = 201

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +       L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTSKRPRSR----SDLQTQLRFGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +      + R ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPLDIITTKDKERSKALIQNYLVSSPRGELPNHLTIDSLQYKGFV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|41323137|gb|AAR99798.1| small ribosomal protein 4 [Plagiochila superba]
          Length = 202

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K    + +     +R  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRVKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|166092896|gb|ABY82408.1| ribosomal protein S4 [Agrostemma githago]
          Length = 201

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLFKYVRIARKAKGSTGQVLXXLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDEQKSRALIQNYLDSSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118626147|emb|CAL39371.1| small ribosomal protein 4 [Anastrepta orcadensis]
          Length = 202

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGLRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNNTVDIPSYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVDLKINELLVVEYYSR 200


>gi|46447001|ref|YP_008366.1| 30S ribosomal protein S4 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|61215574|sp|Q6MBF8|RS4_PARUW RecName: Full=30S ribosomal protein S4
 gi|46400642|emb|CAF24091.1| probable 30S ribosomal protein S4 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 206

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 80/195 (41%), Positives = 125/195 (64%), Gaps = 2/195 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   SK++I RR G N++GR ++P+  +   PG+HG RR+ K S FGLQL  KQK+K 
Sbjct: 1   MARYTGSKNRIARRYGVNIFGRARNPLLHKPNPPGVHGARRR-KKSDFGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+  + +K+A R  G+T+ +    LE RLD +VYR KF  TIFAA+Q V H H
Sbjct: 60  IYGMLSEKQLVAYYKKALRLEGNTASHFAEMLECRLDNLVYRLKFGHTIFAAQQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+  S++ K G VI +K+KS+++  + EA     R VPEY+S + ++     +
Sbjct: 120 ILVDGKKVDRRSFQVKPGMVISIKEKSRKIKIIAEALDNPARSVPEYLSSDKEHFSGQLL 179

Query: 181 RIPSSLKDVPYPVIM 195
             P   + +P+P+ +
Sbjct: 180 AKPI-PEQMPWPIEI 193


>gi|77019135|emb|CAH60174.1| chloroplast 30S ribosomal protein S4 [Funaria hygrometrica]
          Length = 198

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 9/204 (4%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S       Q    K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGVLPGLTNKTPQLKSSSP----NQSAAKKISQYRIRLEEKQKLRFHYG 56

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLV
Sbjct: 57  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLV 115

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I VK + K  A + +    +++  VP +++ +         +I
Sbjct: 116 NDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKAKVPNHLTFDSTQKKGLVNQI 175

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 176 ---LDRESIGLKINELLVVEYYSR 196


>gi|299890916|gb|ADJ57415.1| 30S ribosomal protein S4 [uncultured prymnesiophyte C19847]
          Length = 209

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN-----TRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++   +K ++ RR+G+      K           +  PG HG   ++K + + ++L  K
Sbjct: 1   MARYTGAKLRVTRRLGDLPGFTSKKVNRPSDQGKSTQRPGQHGAT-QTKLTQYAIRLEEK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK++  YG +SEK+  +  K++ + +G T + L+  LE RLD IV+R    PTI AARQ 
Sbjct: 60  QKLRFNYG-LSEKQLMNYIKQSKKIKGATGNVLLQLLEMRLDNIVFRLGLAPTIAAARQL 118

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDN 174
           VNH+H+LVN    +I SY+C+ GD + +K        V++  +L A  ++P+++  N  +
Sbjct: 119 VNHKHILVNNSCTSIPSYQCQPGDTLSIKDNKASKQLVVKNLELPALSNIPQHLEFNKKD 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A  + I          + +    V+E+YSR
Sbjct: 179 LTAKVLGIIDR---EWVALKLNELFVIEYYSR 207


>gi|66990680|emb|CAI29118.1| small ribosomal protein 4 [Plagiochila boryana]
          Length = 200

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K    + +     +R  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|261749446|ref|YP_003257132.1| 30S ribosomal protein S4 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497539|gb|ACX83989.1| 30S ribosomal protein S4 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 202

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMK 59
           M+K    K KI R+ GE ++G  K     R Y  G HG  RR+ K S + +QL  KQK K
Sbjct: 1   MAKYIGPKTKISRKFGECIYGEDKY-FERRKYPSGQHGNNRRRGKRSEYFIQLTEKQKAK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E++F  +F EA R +G T   L+   ESRLD IV+R KF P+  +ARQ V+HR
Sbjct: 60  YTYG-ILERQFEKLFLEAARKKGVTGELLLQACESRLDNIVFRLKFSPSRSSARQIVSHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ VN R VN+ S+R + GD I +++KSK+   +LE+       + E++ ++  NM   F
Sbjct: 119 HITVNDRIVNVPSFRLRPGDKIGIREKSKKHPVILESISNKVGSLVEWLILDEKNMFGVF 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +    P  ++  L+VE YS+
Sbjct: 179 RIMPKRKQ---IPENIKEQLIVELYSK 202


>gi|47458904|ref|YP_015766.1| 30S ribosomal protein S4 [Mycoplasma mobile 163K]
 gi|61215559|sp|Q6KIM1|RS4_MYCMO RecName: Full=30S ribosomal protein S4
 gi|47458232|gb|AAT27555.1| 30s ribosomal protein s4 [Mycoplasma mobile 163K]
          Length = 199

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+      K  RR G ++    K       R Y PG HGQ R+ K S FG+    KQK+
Sbjct: 1   MSRYVGPVFKRSRRFGFSILETGKEFVKGKQRQYAPGQHGQ-RRGKLSDFGIHQLEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG I+E++FR+ F  A++++G T    +  LESRLD IVYR  F  T   ARQ VNH
Sbjct: 60  RFMYG-INERQFRNTFAIANKAKGVTGTAFLQLLESRLDNIVYRMGFAQTRRQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H L+NG+  +I S R   GD IE++ KS+ + ++L + +   R V  +I    D     
Sbjct: 119 GHFLLNGKKADIPSQRINVGDTIELRAKSQNVPTILASIET--RVVAPWIE--KDKFKGK 174

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +R+P   +       +   L+VEFY++
Sbjct: 175 LIRVPERKE---LNQEINEALIVEFYNK 199


>gi|290487072|gb|ADD29920.1| ribosomal protein S4 [Meliosma aff. cuneifolia Moore 333]
          Length = 201

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGKVLLQLLEMRLDNILFRLGMSSTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRC   D+I  K + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCNPRDLITAKDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|48527387|gb|AAT45826.1| small ribosomal protein 4 [Plagiochila longiramea]
          Length = 202

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + + +     ++  +P ++  +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIITKNINSFQKLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|48527395|gb|AAT45830.1| small ribosomal protein 4 [Plagiochila patentissima]
          Length = 202

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ILINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|91214131|ref|YP_538753.1| ribosomal protein S4 [Glycine max]
 gi|90101669|sp|Q2PMU5|RR4_SOYBN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|83595732|gb|ABC25113.1| ribosomal protein S4 [Glycine max]
          Length = 201

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P         L  Q R SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGSLPGLTSKRPTVKSE----LRNQSRSSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ +NHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPQARQLINHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNG  V+I SYRCK  D+I  K + K    +      A R+ +P +++++        
Sbjct: 116 VLVNGHIVDIPSYRCKPQDIITAKDEQKSKTLIQNYLDSAPREKLPNHLTLHPFQYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199


>gi|68171571|ref|ZP_00544946.1| Ribosomal protein S4, bacterial and organelle form [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88657888|ref|YP_507703.1| 30S ribosomal protein S4 [Ehrlichia chaffeensis str. Arkansas]
 gi|123492898|sp|Q2GFT0|RS4_EHRCR RecName: Full=30S ribosomal protein S4
 gi|67999012|gb|EAM85688.1| Ribosomal protein S4, bacterial and organelle form [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88599345|gb|ABD44814.1| ribosomal protein S4 [Ehrlichia chaffeensis str. Arkansas]
          Length = 202

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 98/199 (49%), Positives = 135/199 (67%), Gaps = 2/199 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G NLWGR K P NTR+Y PG HG     KPS FG Q  A +K K YY  I+ 
Sbjct: 6   KYRASRRLGVNLWGRSKDPFNTRNYPPGQHGGMGYKKPSDFGKQFAAHKKFKFYYA-INS 64

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+ R+IF +A + RGDT  N +  LESRL +++Y +  VPTIF+ARQ ++H+HVLVNG++
Sbjct: 65  KQMRNIFLKAYKKRGDTGDNFVGLLESRLSSVLYNSGLVPTIFSARQLISHKHVLVNGKT 124

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI SY  K GDV+ +K+K+K L +V+ A Q  E+ VP+Y+ V+       ++R+P   +
Sbjct: 125 VNISSYVVKVGDVVTLKEKAKNLPAVVFAVQSQEQKVPDYLEVDTQEKSIRYLRVPKYCE 184

Query: 188 DVPYPVIMQPNLVVEFYSR 206
            VPYP  M+ NLV+EFYSR
Sbjct: 185 -VPYPATMEVNLVIEFYSR 202


>gi|310659475|ref|YP_003937196.1| 30S ribosomal protein S4 [Clostridium sticklandii DSM 519]
 gi|308826253|emb|CBH22291.1| 30S ribosomal subunit protein S4 [Clostridium sticklandii]
          Length = 207

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   S  ++ RR G  L+ +       K     R+Y PG HGQ RK K S +G QLR 
Sbjct: 1   MARYTDSSCRLCRREGMKLFLKGDRCYTDKCAFAKRAYAPGQHGQGRK-KVSNYGEQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + E +FR  F+ A++ +G    NL++ LE RLD +VYR     +   ARQ
Sbjct: 60  KQKVKRIYGVL-ETQFRLTFERAEKMQGMAGENLLNLLERRLDNVVYRMGLAASRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H  +NG   NI S     GDVI VK+ S+    +    + + R  P+++ V+ ++
Sbjct: 119 LVRHGHFNLNGHKANIPSMTISVGDVITVKETSRSSVKIKSLVENSTRVAPKWLDVSLES 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           M A  V  P+        + +  +L+VE YS+
Sbjct: 179 MSAKMVANPTR---EDIDLEVAEHLIVELYSK 207


>gi|118626091|emb|CAL41754.1| small ribosomal protein 4 [Cephalozia lunulifolia]
 gi|118626099|emb|CAL39351.1| small ribosomal protein 4 [Cephalozia lunulifolia]
          Length = 202

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGVLPGLTGKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQSLKYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISMNNNIVDIPSYNCEPGDIITIRNKQKSKSMITKNLNLFQKLKMPSHLTFDLTQLEGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200


>gi|222474941|ref|YP_002563356.1| 30S ribosomal protein S4 [Anaplasma marginale str. Florida]
 gi|222419077|gb|ACM49100.1| 30S ribosomal protein S4 [Anaplasma marginale str. Florida]
          Length = 250

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 96/198 (48%), Positives = 130/198 (65%), Gaps = 2/198 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G NLWGR K PV TR+Y PG HG     K S FG Q  A QK K YY  +S 
Sbjct: 54  KYRASRRLGVNLWGRSKDPVATRNYPPGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 112

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+ R+ F  A   +GDT  NL+  LESRL  +VY A FVPT+F+ARQ V+H+HV VNG+ 
Sbjct: 113 KQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 172

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI S+  K GDV+++++++ +L  VL A Q  ER VP+++ V+     A ++R+P   +
Sbjct: 173 VNIPSFSVKPGDVVQIRERATELPMVLAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE 232

Query: 188 DVPYPVIMQPNLVVEFYS 205
            VPYP  M+ NLVVEF+S
Sbjct: 233 -VPYPANMEVNLVVEFFS 249


>gi|48527357|gb|AAT45811.1| small ribosomal protein 4 [Plagiochila banksiana]
          Length = 202

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY           K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTVKSKSSYXD---RSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSLTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNNIVDIPSYNCESGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSPQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|41323087|gb|AAR99773.1| small ribosomal protein 4 [Plagiochila aerea]
          Length = 202

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  +YR    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIYRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P ++  +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|48527401|gb|AAT45833.1| small ribosomal protein 4 [Plagiochila peculiaris]
          Length = 202

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTTNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|289066816|ref|YP_003434334.1| ribosomal protein S4 [Vigna radiata]
 gi|259020003|gb|ACV90201.1| ribosomal protein S4 [Vigna radiata]
          Length = 201

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P     +      Q R SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGYLPGLTSKKPTVKNEF----RNQSRFSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + +++G T   L+  LE RLD I++R     TI  ARQF+NHRH
Sbjct: 57  HYG-LTERQLLKYVRISGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPQARQFINHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  K + K    +      A  + +P +++V+        
Sbjct: 116 VLVNGRIVDIPSYRCKPQDIITAKDEQKSKTLIQNYLDSAPHEKLPNHLTVHPFQYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199


>gi|222103442|gb|ACM44250.1| small ribosomal protein subunit 4 [Bryoxiphium norvegicum]
          Length = 202

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N        
Sbjct: 117 ILVNDRIVNIPSYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESINLKINELLVVEYYSR 200


>gi|48527377|gb|AAT45821.1| small ribosomal protein 4 [Plagiochila fuscolutea]
          Length = 202

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P ++  +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|41323127|gb|AAR99793.1| small ribosomal protein 4 [Plagiochila raddiana]
          Length = 202

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SY C+ GD+I +  K K    V +     ++  +P +++ +   +  + 
Sbjct: 117 ILVNNDIVDIPSYNCEPGDIITIGNKQKSRVIVTKNINSFQKLKIPNHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|330850632|ref|YP_004376513.1| ribosomal protein S4 [Ptilidium pulcherrimum]
 gi|302024761|gb|ADK89607.1| ribosomal protein S4 [Ptilidium pulcherrimum]
          Length = 202

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K      SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVCIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N  +VNI SY CK GD+I +K + K  + +     L ++  +P +++ +   +  + 
Sbjct: 117 ISINNDTVNIPSYNCKPGDIITIKNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +   LVVE+YSR
Sbjct: 177 NQMIHR---EWIHLKINELLVVEYYSR 200


>gi|323149084|ref|YP_004222648.1| ribosomal protein S4 [Anthriscus cerefolium]
 gi|289645577|gb|ADD13640.1| ribosomal protein S4 [Anthriscus cerefolium]
          Length = 201

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQARSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + +    A +  +   + +D +P+++++         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NKIIDSK---WVGLKINELLVVEYYSR 199


>gi|116327250|ref|YP_796970.1| 30S ribosomal protein S4 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116327290|ref|YP_797010.1| 30S ribosomal protein S4 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332096|ref|YP_801814.1| 30S ribosomal protein S4 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280174|sp|Q04PW4|RS4_LEPBJ RecName: Full=30S ribosomal protein S4
 gi|122284903|sp|Q055B8|RS4_LEPBL RecName: Full=30S ribosomal protein S4
 gi|116119994|gb|ABJ78037.1| 30S Ribosomal protein S4 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120034|gb|ABJ78077.1| 30S Ribosomal protein S4 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125785|gb|ABJ77056.1| 30S Ribosomal protein S4 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 207

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 116/212 (54%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT----RSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      KI RR G +L+ +     N     R   PG+   +RK K S +G QLR KQ
Sbjct: 1   MARYRGPVVKIMRREGVDLFLKSSYTFNKDKFHRKGPPGMP-TKRKGKVSEYGTQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR+ ++EA  S G T   L+  LE RLD +VYR  F  T   AR F+
Sbjct: 60  KLKRAYG-LLEKQFRNYYEEASHSHGVTGEILLQLLERRLDNVVYRLGFAVTRRQARNFI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174
            HRHVLVNG  V+I SYR   GD +E+++K +    + +  +L++  + +P ++S ++ N
Sbjct: 119 AHRHVLVNGERVDIPSYRLNVGDKVEIREKFRASTFIADNIRLSQSLQGIPSWLSADYTN 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +P         + ++  ++VE YS+
Sbjct: 179 FGGDVTALPERHH---IDLPVKEQVIVELYSK 207


>gi|48527399|gb|AAT45832.1| small ribosomal protein 4 [Plagiochila patzschkei]
          Length = 202

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRXKIIRRLGSLPGLTSKTLKSKSNY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNIHSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|41323109|gb|AAR99784.1| small ribosomal protein 4 [Pedinophyllum interruptum]
          Length = 202

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K   +  S+   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKILKSKSSF---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GDVI ++ K +  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDVITIRNKQQSQSIITKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWVNLKINELLVVEYYSR 200


>gi|48527389|gb|AAT45827.1| small ribosomal protein 4 [Plagiochila macrostachya]
          Length = 202

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K    + +     +R  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKKKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|118625999|emb|CAL41737.1| small ribosomal protein 4 [Lepidozia cupressina]
          Length = 203

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+G       K+     +Y           K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKVIRRLGAPPGLTSKTLKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  + 
Sbjct: 117 ISINNNIVDIPSYNCEPGDIITIRDKQKSRSIIAKNVNLFQNLKIPSHLTFDSIKLCGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +           + +   LVVE+YSR
Sbjct: 177 NQTIHR---EWINLKINELLVVEYYSR 200


>gi|48527417|gb|AAT45841.1| small ribosomal protein 4 [Plagiochila sciophila]
          Length = 202

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTFKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  + R    PTI  ARQ VNH H
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +   LVV++YSR
Sbjct: 177 NQMIDR---EWINLKINELLVVKYYSR 200


>gi|86438880|emb|CAJ55410.1| small ribosomal protein 4 [Plagiochila circinalis]
          Length = 202

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIIAIRNKEKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|34500916|ref|NP_904101.1| ribosomal protein S4 [Amborella trichopoda]
 gi|52783274|sp|Q70Y01|RR4_AMBTC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|34481631|emb|CAD45109.1| ribosomal protein S4 [Amborella trichopoda]
          Length = 201

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK GD +  ++K +  A +      +   ++P+++++         
Sbjct: 116 ILVNGRLVDIPSYRCKPGDFVTTREKERSRALIQNHMNSSPNEELPKHLTLYSLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|41323117|gb|AAR99788.1| small ribosomal protein 4 [Plagiochilion mayebarae]
          Length = 202

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K   +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNIDSFQKLKIPSHLTFDPTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LV E+YSR
Sbjct: 177 NQMINR---EWIILKINELLVAEYYSR 200


>gi|166239974|gb|ABY86503.1| ribosomal protein S4 [Silene fruticosa]
          Length = 205

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 7/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K K K  A +L     +   ++P++++++       +
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTITAKDKQKSRALILNYLDSSPPDELPKHLTLDPFPYKFPY 175

Query: 180 VRIPSSLKDV-PYPVIMQPNLVVEFYSR 206
             + + + D     + +   LVVE+YSR
Sbjct: 176 KGLINQIIDSKWVGLKINELLVVEYYSR 203


>gi|118625939|emb|CAL39291.1| small ribosomal protein 4 [Neesioscyphus argillaceus]
          Length = 202

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD I V+ + K  + + +   L     +P +++ +   +    
Sbjct: 117 ISINNDIVDIPSYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---ELINLKINELLVVEYYSR 200


>gi|26399184|sp|Q9M4B8|RR4_JAMAU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|8017423|emb|CAB92136.1| small ribosomal protein 4 [Syzygiella autumnalis]
          Length = 202

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  S+   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTFKSKSSF---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRFDMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD I ++ K K  + + + + L ++  +P +++ +   +    
Sbjct: 117 ISVNNGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKIKIPSHLTFDSTQLRGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTVNR---EWVNLKINELLVVEYYSR 200


>gi|193237702|dbj|BAG50112.1| ribosomal protein S4 protein [Takakia lepidozioides]
 gi|193237719|dbj|BAG50128.1| ribosomal protein S4 protein [Takakia lepidozioides]
          Length = 202

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+G       K+P +   Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRVIRRLGALPGLTNKTPQSKSGY---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-VTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R+VNI S+RCK  D I  K + K  A + +    +++ ++P ++++N        
Sbjct: 117 ILVNDRTVNIPSFRCKPQDFITTKDRQKSQAVITKNMDCSQKSEMPNHLTLNSSQKRGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---ESIGLKINELLVVEYYSR 200


>gi|319760353|ref|YP_004124291.1| 30S ribosomal protein S4 [Candidatus Blochmannia vafer str. BVAF]
 gi|318039067|gb|ADV33617.1| 30S ribosomal protein S4 [Candidatus Blochmannia vafer str. BVAF]
          Length = 207

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRS---YGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR   +L+ +     ++++    + PG H   RK++ S +G+QLR KQ
Sbjct: 1   MAKYLGPKLKLSRRENTDLFLKSGIRSIDSKCRFEHSPGQH-NIRKARYSDYGMQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG I E++F + +K+A R +G+T   L+  LESRLD +VYR  F  T   +RQ V
Sbjct: 60  KVKRIYG-ILERQFVNYYKKAARIKGNTGEILLQLLESRLDNVVYRMGFGSTRAESRQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174
           +H+ V+VNGR VNI SY+     VI++  +SK    +  A ++AE  R+   +I V+   
Sbjct: 119 SHKSVVVNGRVVNIPSYQVMSDTVIQISTRSKHQTRIHAALEIAEQQRERVLWIEVDSIK 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   F R P   +       +  +L+VE YS+
Sbjct: 179 LKGFFKRRPERSE---LSANIDEHLIVELYSK 207


>gi|152112240|sp|Q6YPY9|RS4_ONYPE RecName: Full=30S ribosomal protein S4
          Length = 198

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  K+ RR+  ++    K  +  R+YGPG HGQ +K K S +GLQL+ KQK++ 
Sbjct: 1   MSRYTGSLWKVSRRLNYSVSETGKE-LRKRAYGPGQHGQ-KKLKLSDYGLQLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FR  F  A + +G      +  LESRLD +VYR  F  T   ARQ  NH H
Sbjct: 59  TYG-VSEKQFRKTFDNASKLKGIHGEMFLVLLESRLDNVVYRLGFAKTRAQARQLANHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SYR K G  + +++KSK L  V EA   ++    +Y+S++ + +V  +V
Sbjct: 118 ILVDGKKVDIASYRLKPGQTVTLREKSKNLNIVQEAVN-SKFVRADYVSLDKE-LVGKYV 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   + +P    +   L+VE+Y+R
Sbjct: 176 RYPQRNEFLP---DINEQLIVEYYNR 198


>gi|5163230|gb|AAD40609.1|AF115283_28 ribosomal protein S4 [Leptospira interrogans]
          Length = 207

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 11/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT----RSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++      KI RR G +L+ +     N     R   PG+   +RK K S +G QLR +Q
Sbjct: 1   MARYRGPVVKIMRREGVDLFLKSSYTFNKDKFHRKGPPGMP-TKRKGKVSEYGAQLREEQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K+ YG + EK+FR  ++EA  + G T   L+  LE RLD +VYR  F  T   AR F+
Sbjct: 60  KLKRAYG-LLEKQFRRYYEEASHAHGVTGEILLQLLERRLDNVVYRLGFAITRRQARNFI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDN 174
            HRH+LVNG  V+I SYR   GD +E+++K K  + + +  +L++  + +P ++S ++ N
Sbjct: 119 AHRHILVNGERVDIPSYRLNVGDKVEIREKFKTSSFIADNIKLSQSLQGIPSWLSADYTN 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +P         + ++  ++VE YS+
Sbjct: 179 FGGDVTALPERHH---IDLPVKEQVIVELYSK 207


>gi|306486209|gb|ADM92746.1| ribosomal protein S4 [Franklinia alatamaha]
          Length = 198

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P          + Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPRA-------GNDQSRSGKKSQYRIRLEEKQKLRF 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 54  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +  +   +   ++P+++++         
Sbjct: 113 ILVNGRIVDIPSYRCKPRDIITARDEQKSRALIQNSLDSSPHEELPKHLTLYPFQYKGLV 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 173 NQIIDSK---WVGLKINELLVVEYYSR 196


>gi|328541080|gb|AEB21764.1| ribosomal protein S4 [Chiloscyphus semiteres]
          Length = 200

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+     SY   +       K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ 
Sbjct: 58  G-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHGHIS 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +
Sbjct: 117 INNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +        + +   LVVE+YSR
Sbjct: 177 MINR---EWINLKINELLVVEYYSR 198


>gi|157689476|gb|ABV65294.1| ribosomal protein S4 [Ficus sp. Moore 315]
          Length = 201

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K        G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKL----RAGSDLRNQLRPGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I V+ + K  + V      + R ++P++++++      + 
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVRDEQKSKSLVQNYLDSSSREELPKHLTLHPFQYKGSV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---CVGLKINELLVVEYYSR 199


>gi|114804267|ref|YP_762263.1| ribosomal protein S4 [Morus indica]
 gi|122166803|sp|Q09X15|RR4_MORIN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|78100319|gb|ABB20960.1| ribosomal protein S4 [Morus indica]
          Length = 201

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKP----RAGSNLRNQLRPGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTEQQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK + K  + V      + R ++P++++++      + 
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIIRVKDEQKSKSLVQNYLDSSSREELPKHLTLHPFQYKGSV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---CVGLKINELLVVEYYSR 199


>gi|270300639|gb|ACZ69398.1| ribosomal protein S4 [Ptilidium ciliare]
          Length = 202

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K      SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVCIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N  +VNI SY CK GD+I ++ + K  + +     L ++  +P +++ +   +  + 
Sbjct: 117 ISINNDTVNIPSYNCKPGDMITIRNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +   LVVE+YSR
Sbjct: 177 NQMIHR---EWIHLKINELLVVEYYSR 200


>gi|166092884|gb|ABY82400.1| ribosomal protein S4 [Eudianthe laeta]
          Length = 201

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLXMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D I  K + K    + +   L+   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIXAKDEQKSRTLIQKCIDLSPPEELPKHLTLDPFPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|328541082|gb|AEB21765.1| ribosomal protein S4 [Mastigophora woodsii]
          Length = 199

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKTLKPKSSY---IDRSISNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +I
Sbjct: 117 NNDIVDIPSYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLCGSINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWIHLKINELLVVEYYSR 197


>gi|114107048|ref|YP_740204.1| ribosomal protein S4 [Liriodendron tulipifera]
 gi|122221293|sp|Q0G9L7|RR4_LIRTU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|113200996|gb|ABI32511.1| ribosomal protein S4 [Liriodendron tulipifera]
          Length = 201

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + +  A +      +   ++ ++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRGEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|54020253|ref|YP_116101.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 232]
 gi|71893926|ref|YP_279372.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae J]
 gi|72080904|ref|YP_287962.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 7448]
 gi|61215435|sp|Q5ZZW4|RS4_MYCH2 RecName: Full=30S ribosomal protein S4
 gi|90101694|sp|Q4A7F0|RS4_MYCH7 RecName: Full=30S ribosomal protein S4
 gi|90101695|sp|Q4A9B0|RS4_MYCHJ RecName: Full=30S ribosomal protein S4
 gi|53987426|gb|AAV27627.1| 30s ribosomal protein S4 [Mycoplasma hyopneumoniae 232]
 gi|71852053|gb|AAZ44661.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae J]
 gi|71914028|gb|AAZ53939.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 7448]
 gi|312601523|gb|ADQ90778.1| 30S ribosomal protein S4 [Mycoplasma hyopneumoniae 168]
          Length = 205

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 116/210 (55%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+   S  +  RR+G ++    K  +    R Y PGLHG  R+SKPS +G+ LR KQK+
Sbjct: 1   MSRYTGSIFRKSRRLGFSILETGKEFAKGKQRRYAPGLHG-LRRSKPSDYGVHLREKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG +SEK+FR+ +++A +  G      +  LESRLD  VYRA F  T   ARQ VNH
Sbjct: 60  RFMYG-LSEKQFRNTYRKATKKTGIAGTLFLQALESRLDNSVYRAGFAETRRQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVI--EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
            H LVN + V+I S++ K+GD+     ++  K   +    + L  R    ++ V+ DN  
Sbjct: 119 GHFLVNNKKVDIPSFQLKQGDIFELTTRKDGKIRKNQQILTSLETRTPAAWLEVDKDNFK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             F R+P   +       ++ +L+VEFYS+
Sbjct: 179 VVFNRMPERSE---LNQEIKESLIVEFYSK 205


>gi|118626089|emb|CAL39348.1| small ribosomal protein 4 [Cephaloziella varians]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD+I +K K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ISVNSNLVDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLRQLQGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQKVNR---EWVNLKINELLVVEYYSR 200


>gi|89147828|gb|ABD62762.1| ribosomal protein 4 [Leiocolea heterocolpos]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+     SY   +       K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVKIIRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ 
Sbjct: 60  G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHIS 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  +  +
Sbjct: 119 INNDIVDIPSYNCESGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSVNQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
             +        + +   LVVE+YSR
Sbjct: 179 TINR---EWINLKINELLVVEYYSR 200


>gi|118626007|emb|CAL39321.1| small ribosomal protein 4 [Leiomylia anomala]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K   +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKMLKSKSSY---VDRSISNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +   L +   +P ++S +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQNLKIPSHLSFDSTKLCGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQPINR---ESVNLKINELLVVEYYSR 200


>gi|48527407|gb|AAT45836.1| small ribosomal protein 4 [Plagiochila punctata]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNIYSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|15896356|ref|NP_349705.1| 30S ribosomal protein S4 [Clostridium acetobutylicum ATCC 824]
 gi|26399600|sp|Q97EK5|RS4A_CLOAB RecName: Full=30S ribosomal protein S4 A
 gi|15026171|gb|AAK81045.1|AE007807_3 Ribosomal protein S4 [Clostridium acetobutylicum ATCC 824]
 gi|325510512|gb|ADZ22148.1| 30S ribosomal protein S4 [Clostridium acetobutylicum EA 2018]
          Length = 206

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR G  L+ +       K     R Y PG+HGQ RK K S +GLQLR 
Sbjct: 1   MARYTGAVCRLCRREGLKLFLKGDRCYTDKCAFTRRGYAPGVHGQSRK-KISNYGLQLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K+ YG + EK+FR  +K A+R +G +  NL+  LE RLD + Y+  +  +   ARQ
Sbjct: 60  KQKAKRIYGVL-EKQFRIYYKRAERIKGISGENLLKLLELRLDNVAYKLGYGSSRKEARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H H LVNG+ V+I SY  K  +V+ V +KS+        ++   + +P +I  N+DN
Sbjct: 119 LVTHGHFLVNGKKVDIPSYTLKVNEVVSVSEKSRGTEKFKTFAENP-KTLPAWIEANYDN 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A  V  P+          ++  L+VE YS+
Sbjct: 178 FEAKIVAEPNR---EDIDTPIKETLIVELYSK 206


>gi|114107135|ref|YP_740119.1| ribosomal protein S4 [Daucus carota]
 gi|122221312|sp|Q0G9W0|RR4_DAUCA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|113200910|gb|ABI32426.1| ribosomal protein S4 [Daucus carota]
          Length = 201

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMATTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + +    A +  +    ++ ++P+++++         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSFNSPSQDEMPKHLTLQPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|159161255|ref|YP_001542533.1| ribosomal protein S4 [Cuscuta exaltata]
 gi|172048131|sp|A8W3C6|RR4_CUSEX RecName: Full=Plastid 30S ribosomal protein S4
 gi|158938680|gb|ABW83697.1| ribosomal protein S4 [Cuscuta exaltata]
          Length = 201

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P   R     L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRPRTVR----DLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++  +  + A +++G T   LI  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLINYVRIARKAKGSTGEILIQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VNG  V+I SYRCK  D+I  K K K  A +  + +   R ++P +++++        
Sbjct: 116 IFVNGHIVDIPSYRCKPRDIITSKDKPKSGALIKNSIEAFPREELPNHLTLHPAPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 176 NQIIDTK---WVGLKINELLVVEYYSR 199


>gi|48527379|gb|AAT45822.1| small ribosomal protein 4 [Plagiochila hakkodensis]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGISPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 IAINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 SQMINR---EWINLKINELLVVEYYSR 200


>gi|41323129|gb|AAR99794.1| small ribosomal protein 4 [Plagiochila rutilans]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|41323133|gb|AAR99796.1| small ribosomal protein 4 [Plagiochila sandei]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI R +G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRLLGALPGLTSKTLKSKSSY---IDRSTANKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  + R    PT+  ARQ VNH H
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTVPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD I ++ + K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDMVDIPSYNCEPGDSITIRNEQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +   LVVE+YSR
Sbjct: 177 NQMIDR---EWINLQINELLVVEYYSR 200


>gi|115391906|ref|YP_778494.1| ribosomal protein S4 [Jasminum nudiflorum]
 gi|122164969|sp|Q06RC7|RR4_JASNU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|110456227|gb|ABG74632.1| ribosomal protein S4 [Jasminum nudiflorum]
          Length = 203

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +    + K  RR+G       KSP      G  L  Q R  K S + ++L  KQK+  
Sbjct: 1   MPRYLGPRFKKIRRLGALPGLTNKSP----KAGSDLRKQPRSRKKSQYRIRLEEKQKLCF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG + E +  +  + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LREYQLLNYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+  SYRCK  D+I  K   K    +  +     ++++P +++++        
Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLGSSPQKELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|41323091|gb|AAR99775.1| small ribosomal protein 4 [Plagiochila britannica]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY           K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSYSD---RSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ITINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWTNLKINELLVVEYYSR 200


>gi|213419635|ref|ZP_03352701.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 184

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/186 (39%), Positives = 117/186 (62%), Gaps = 7/186 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIGQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178

Query: 176 VATFVR 181
             T+ R
Sbjct: 179 EGTYKR 184


>gi|166154841|ref|YP_001654959.1| 30S ribosomal protein S4 [Chlamydia trachomatis 434/Bu]
 gi|166155716|ref|YP_001653971.1| 30S ribosomal protein S4 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336122|ref|ZP_07224366.1| 30S ribosomal protein S4 [Chlamydia trachomatis L2tet1]
 gi|226697823|sp|B0B8K1|RS4_CHLT2 RecName: Full=30S ribosomal protein S4
 gi|226697825|sp|B0BA80|RS4_CHLTB RecName: Full=30S ribosomal protein S4
 gi|165930829|emb|CAP04327.1| SSU ribosomal protein S4P [Chlamydia trachomatis 434/Bu]
 gi|165931704|emb|CAP07281.1| SSU ribosomal protein S4P [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 209

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  +   PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    +KE    +G+ +   +   E RLD+IVYR  F  TIFAA+Q V+H H
Sbjct: 60  CYGMILEKQLVKAYKEVVNKQGNVAQMFLEKFECRLDSIVYRLGFAKTIFAAQQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  I +K+KSK+LA V E+ +   +  +P Y+S++        
Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179

Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205
           V  P   +     P+ +  +++ EF S
Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206


>gi|157689474|gb|ABV65293.1| ribosomal protein S4 [Euonymus americanus]
          Length = 201

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTSKRP----RVGNDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     T+  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTVPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + K  A +          +VP++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSFPHEEVPKHLTLHPIQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   L+VE+YSR
Sbjct: 176 NQIIDSK---SIGLKINELLIVEYYSR 199


>gi|86438908|emb|CAJ55415.1| small ribosomal protein 4 [Plagiochila validissima]
          Length = 202

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVV++YSR
Sbjct: 177 NQMINR---EWINLKINELLVVQYYSR 200


>gi|328541040|gb|AEB21744.1| ribosomal protein S4 [Kurzia dendroides]
          Length = 202

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K       Y           K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T    +  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQSLKYVRIARKAKGSTGQVSLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +KQK K  + + +   L +   +P +++ +   +  + 
Sbjct: 117 IPINNNIVDIPSYNCEPGDIITIKQKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTINR---ESIDLKINELLVVEYYSR 200


>gi|41323097|gb|AAR99778.1| small ribosomal protein 4 [Plagiochila cristata]
          Length = 202

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFSLGLSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIVNKQKSRSIVTKNINSFQKSKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LVVE+YSR
Sbjct: 177 NQIINR---EWINLKINELLVVEYYSR 200


>gi|15605357|ref|NP_220143.1| 30S ribosomal protein S4 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789365|ref|YP_328451.1| 30S ribosomal protein S4 [Chlamydia trachomatis A/HAR-13]
 gi|237803055|ref|YP_002888249.1| 30S ribosomal protein S4 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804976|ref|YP_002889130.1| 30S ribosomal protein S4 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|7388192|sp|O84631|RS4_CHLTR RecName: Full=30S ribosomal protein S4
 gi|90101682|sp|Q3KL69|RS4_CHLTA RecName: Full=30S ribosomal protein S4
 gi|3329073|gb|AAC68230.1| S4 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|76167895|gb|AAX50903.1| SSU ribosomal protein S4P [Chlamydia trachomatis A/HAR-13]
 gi|231273276|emb|CAX10191.1| SSU ribosomal protein S4P [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274289|emb|CAX11084.1| SSU ribosomal protein S4P [Chlamydia trachomatis B/Jali20/OT]
 gi|296437091|gb|ADH19261.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/11222]
 gi|297748756|gb|ADI51302.1| SSU ribosomal protein S4P [Chlamydia trachomatis D-EC]
 gi|297749636|gb|ADI52314.1| SSU ribosomal protein S4P [Chlamydia trachomatis D-LC]
          Length = 209

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  +   PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    +KE    +G+ +   +   E RLD IVYR  F  TIFAA+Q V+H H
Sbjct: 60  CYGMILEKQLVKAYKEVVNKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  I +K+KSK+LA V E+ +   +  +P Y+S++        
Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179

Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205
           V  P   +     P+ +  +++ EF S
Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206


>gi|295311734|ref|YP_003587470.1| ribosomal protein S4 [Oncidium Gower Ramsey]
 gi|254833111|gb|ACT83114.1| ribosomal protein S4 [Oncidium Gower Ramsey]
          Length = 201

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +       LH      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKIPRSRSDLQTQLH----SGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +      + R ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKARDIITTKDKERSKALIQNYLVSSPRGELPNHLTIDSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|110005221|emb|CAK99547.1| probable 30s ribosomal protein s4 [Spiroplasma citri]
          Length = 204

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++   S  K  RR G ++    K  S    R+  PG HGQRR    +Y GLQL  KQK+
Sbjct: 1   MARYRGSIFKKARRYGFSILENDKEFSKGKKRTTPPGQHGQRRSKLSNY-GLQLHEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
              YG ++E++FR+ + ++ + +G    N +  LESRLD IV+R     T   ARQ VNH
Sbjct: 60  CYMYG-LTERQFRNTYSKSKKMKGIAGTNFLIMLESRLDNIVHRMGLSQTRAGARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+LVNG+ V+I SY CK GDVI VK+  ++   +LE+       + E++  +   M  T
Sbjct: 119 AHILVNGKKVDIPSYNCKPGDVISVKESLQKNVKILESLDSQVSTL-EFVKFDKTKMTGT 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +VR P   +       +   L+VE+Y+R
Sbjct: 178 YVRFPLREE---LNSNINEALIVEWYNR 202


>gi|26399186|sp|Q9M4B9|RR4_DIPFO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|8017364|emb|CAB92129.1| small ribosomal protein 4 [Diphyscium foliosum]
          Length = 202

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    +    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTSKTPQLKSNS---INQSASNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R VNI SYRCK  D I +K++ K    +++   L+++  +P +++ N        
Sbjct: 117 ILVNDRIVNIPSYRCKPQDFITIKERQKSQGIIVKNMDLSQKYKIPNHLTFNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|157689482|gb|ABV65297.1| ribosomal protein S4 [Gunnera manicata]
          Length = 201

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSVKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITARDEEKSRALIQNFLDSSTHAELPKHLTRHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199


>gi|41323113|gb|AAR99786.1| small ribosomal protein 4 [Plagiochila gymnocalycina]
          Length = 202

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLVKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +K K K  + V +     ++  +P +++ N   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|41323099|gb|AAR99779.1| small ribosomal protein 4 [Plagiochila cucullifolia var. anomala]
          Length = 202

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K   + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSALNKKVFQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K    + +    ++R  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSSQRLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|48527427|gb|AAT45846.1| small ribosomal protein 4 [Plagiochila turgida]
          Length = 202

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSALNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQALLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K    + +     +R  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|255311449|ref|ZP_05354019.1| 30S ribosomal protein S4 [Chlamydia trachomatis 6276]
 gi|255317750|ref|ZP_05358996.1| 30S ribosomal protein S4 [Chlamydia trachomatis 6276s]
 gi|296436163|gb|ADH18337.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/9768]
 gi|296438023|gb|ADH20184.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/11074]
 gi|297140525|gb|ADH97283.1| 30S ribosomal protein S4 [Chlamydia trachomatis G/9301]
          Length = 209

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  +   PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    ++E    +G+ +   +   E RLD IVYR  F  TIFAA+Q V+H H
Sbjct: 60  CYGMILEKQLVKAYEEVVNKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  I +K+KSK+LA V E+ +   +  +P Y+S++        
Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179

Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205
           V  P   +     P+ +  +++ EF S
Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206


>gi|229915555|gb|ACQ90899.1| ribosomal protein S4 [Pedinomonas minor]
          Length = 199

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I RR+GE L G  + P+ TR   PG HG   K    Y G++L  KQK++ 
Sbjct: 1   MARYSGPRLRIIRRLGE-LPGLTRKPL-TRLNPPGQHGANTKKNSQY-GIRLLEKQKLRY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE +     K+A R++G T   L+  LE RLD  +YR  F PTI AARQ V+H H
Sbjct: 58  NYA-ISETQLIRYVKQARRAKGSTGEILLQNLEMRLDNTIYRLGFAPTILAARQMVSHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVN   V I SY C+  D + V+ K +    V  +   A   +P ++++N D + A   
Sbjct: 117 ILVNNVRVTIPSYPCQPKDTVAVRNKPQSKKLVTNSLTSA--VIPGHLNLNKDALTAVIQ 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   +      P  +   L+VEFYSR
Sbjct: 175 Q---TASRTSVPFEVNELLIVEFYSR 197


>gi|258651411|ref|YP_003200567.1| 30S ribosomal protein S4 [Nakamurella multipartita DSM 44233]
 gi|258554636|gb|ACV77578.1| ribosomal protein S4 [Nakamurella multipartita DSM 44233]
          Length = 201

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G        R + PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPITKKSRRLKTDLVG-GDMAFERRPFPPGQHGRARTKEKEYL-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA    G T   L+  LESRLD +VYRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYAEAASRTGKTGDTLLQILESRLDNVVYRAGLARTRRHARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
             VNG  V++ SYR ++ D+I V+++S +      A +   ER  P ++ V  + +    
Sbjct: 118 FEVNGVRVDVPSYRVEQYDLITVRKQSTESFPFELARATFGERTPPAWMKVVPETLQIII 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +       +   L+VEFYS+
Sbjct: 178 HSLPVRAQ---IDSQITEQLIVEFYSK 201


>gi|187251795|ref|YP_001876277.1| RNA-binding S4 domain-containing protein [Elusimicrobium minutum
           Pei191]
 gi|226699062|sp|B2KEJ4|RS4_ELUMP RecName: Full=30S ribosomal protein S4
 gi|186971955|gb|ACC98940.1| RNA-binding S4 domain protein [Elusimicrobium minutum Pei191]
          Length = 201

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 102/206 (49%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE ++G  KS + +           RK K S FG QL  KQK K 
Sbjct: 1   MARYIGPKTKIARKFGEPIFGPDKSLIKSERAAGNNKHAPRKKKMSVFGTQLAEKQKAKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F ++F +A    G T   L+  LE RLD IVYR     T  AARQ V HRH
Sbjct: 61  TYG-LLEKQFSNLFTKAHSLPGVTGEVLMQLLECRLDNIVYRMGLARTRAAARQLVTHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + V+G  V   SY  K G VI V + SK L+      +  +     +I    + + A +V
Sbjct: 120 ITVDGEIVKTPSYSVKPGQVISVTEGSKSLSMFEVNLKGYDHAKYSWIEW-KEPVSAKYV 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP   +    P  +   L+VE YS+
Sbjct: 179 RIPERAE---IPENINEQLIVEHYSK 201


>gi|48527421|gb|AAT45843.1| small ribosomal protein 4 [Plagiochila subtropica]
          Length = 202

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIIIIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---ELIDLKINELLVVEYYSR 200


>gi|78778790|ref|YP_396902.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9312]
 gi|90101704|sp|Q31CC9|RS4_PROM9 RecName: Full=30S ribosomal protein S4
 gi|78712289|gb|ABB49466.1| SSU ribosomal protein S4P [Prochlorococcus marinus str. MIT 9312]
          Length = 202

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+    +S  PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     K+A    G T  NL+  LE+RLD + +R  F  TI  +RQ VNH H
Sbjct: 58  NYG-VSEKQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+ ++I  Y+CK GDVI +K+       V    +     +VP ++ ++   +    
Sbjct: 117 VTVNGKVLDIAGYQCKSGDVIGIKENKASKKLVEGNIEFPGLANVPPHLDLDKPKLTGKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 TGKCDR---EWVALEINELLVVEYYSR 200


>gi|304372886|ref|YP_003856095.1| 30S ribosomal protein S4 [Mycoplasma hyorhinis HUB-1]
 gi|304309077|gb|ADM21557.1| 30S ribosomal protein S4 [Mycoplasma hyorhinis HUB-1]
 gi|330723530|gb|AEC45900.1| 30S ribosomal protein S4 [Mycoplasma hyorhinis MCLD]
          Length = 205

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 110/210 (52%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+      K  RR G ++    K       R Y PG HGQ RK+K S +GL L  KQK+
Sbjct: 1   MSRYTGPVFKKSRRYGFSILETGKEFVKGKQRKYAPGQHGQ-RKTKLSDYGLHLYEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG I+E++FR+ FK+A +  G      +  LESRLD IVYRA F  T   ARQ VNH
Sbjct: 60  RFMYG-INERQFRNTFKKATKKHGVAGTVFLQTLESRLDNIVYRAGFAETRRQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVI--EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
            H L+NG+  NI S     GD I    K++ K   +V     L +    E+I +  D   
Sbjct: 119 GHFLLNGKKANIPSMILSVGDTIELTTKKEGKIRKNVQILEALEKNRTAEWIKLEKDKFK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ATF R+P   +       ++ +L+VEFYS+
Sbjct: 179 ATFERLPERKE---LNPEIKESLIVEFYSK 205


>gi|183221323|ref|YP_001839319.1| 30S ribosomal protein S4 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911414|ref|YP_001962969.1| 30S ribosomal protein S4 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226699081|sp|B0SA21|RS4_LEPBA RecName: Full=30S ribosomal protein S4
 gi|226699082|sp|B0SSF3|RS4_LEPBP RecName: Full=30S ribosomal protein S4
 gi|167776090|gb|ABZ94391.1| 30S Ribosomal protein S4 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779745|gb|ABZ98043.1| 30S ribosomal protein S4 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 210

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/215 (36%), Positives = 120/215 (55%), Gaps = 14/215 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++      K+ RR G NL+ +        KS +  R Y PGL   ++K K + +G QLR
Sbjct: 1   MARYRGPVVKLMRREGLNLFLKNSHTLHKEKSSLEKRKYPPGLP-PKKKGKITEYGAQLR 59

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + EK+FR  F+EA  + G    NL+ FLE RLD ++YR  F  T   AR
Sbjct: 60  EKQKVKRAYGVL-EKQFRRYFEEASHTPGIPGENLLQFLERRLDNVLYRMGFAVTRRQAR 118

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVN 171
            FV HRH+LVNG  V+I SYR   GD IE+++K ++ A + E  +LA+       ++SV+
Sbjct: 119 NFVAHRHILVNGHRVDICSYRVNIGDKIEIREKFQKSAFIEENIKLAQAINRTASWVSVD 178

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +       + +P+        + ++  ++VE YS+
Sbjct: 179 YAKFSGEVLSLPTRDH---IDIPVKEQVIVELYSK 210


>gi|123967997|ref|YP_001008855.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. AS9601]
 gi|126695767|ref|YP_001090653.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9301]
 gi|157412822|ref|YP_001483688.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9215]
 gi|152112244|sp|A3PBC7|RS4_PROM0 RecName: Full=30S ribosomal protein S4
 gi|152112248|sp|A2BPN7|RS4_PROMS RecName: Full=30S ribosomal protein S4
 gi|172047276|sp|A8G3C1|RS4_PROM2 RecName: Full=30S ribosomal protein S4
 gi|91070325|gb|ABE11242.1| 30S ribosomal protein S4 [uncultured Prochlorococcus marinus clone
           HF10-88F10]
 gi|123198107|gb|ABM69748.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. AS9601]
 gi|126542810|gb|ABO17052.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9301]
 gi|157387397|gb|ABV50102.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9215]
          Length = 202

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+    +S  PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     K+A    G T  NL+  LE+RLD + +R  F  TI  +RQ VNH H
Sbjct: 58  NYG-VSEKQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+ ++I  Y+CK GDVI +K+       V    +     +VP ++ ++   +    
Sbjct: 117 VTVNGKVLDIAGYQCKSGDVIGIKENKASKKLVEGNIEFPGLANVPPHLDLDKPKLTGKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 NGKCDR---EWVALEINELLVVEYYSR 200


>gi|48527375|gb|AAT45820.1| small ribosomal protein 4 [Plagiochila flexuosa]
          Length = 202

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKLKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMCIARKAKGSTGEVLLQLLEMRSDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDMVNIPSYNCESGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWITLKINELLVVEYYSR 200


>gi|15828060|ref|NP_302323.1| 30S ribosomal protein S4 [Mycobacterium leprae TN]
 gi|221230537|ref|YP_002503953.1| 30S ribosomal protein S4 [Mycobacterium leprae Br4923]
 gi|7388198|sp|Q9X799|RS4_MYCLE RecName: Full=30S ribosomal protein S4
 gi|254764601|sp|B8ZSH7|RS4_MYCLB RecName: Full=30S ribosomal protein S4
 gi|4539113|emb|CAB39834.1| putative 30S ribosomal protein S4 [Mycobacterium leprae]
 gi|13093613|emb|CAC30913.1| 30S ribosomal protein S4 [Mycobacterium leprae]
 gi|219933644|emb|CAR72055.1| 30S ribosomal protein S4 [Mycobacterium leprae Br4923]
          Length = 201

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPITRKSRRLRIDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
             VNG  VN+ SYR  + D+I+++ KS        A +   +R +P ++ V  ++     
Sbjct: 118 FSVNGVHVNVPSYRVSQYDIIDIRDKSLDTVPFQIARETVGDRPIPSWLQVVGEHQRILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P  ++ +  P+I    L+VE+YS+
Sbjct: 178 HQLPERVQ-IEVPLI--EQLIVEYYSK 201


>gi|33860967|ref|NP_892528.1| 30S ribosomal protein S4 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|41017826|sp|Q7V2R1|RS4_PROMP RecName: Full=30S ribosomal protein S4
 gi|33639699|emb|CAE18869.1| 30S ribosomal protein S4 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 202

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+    +S  PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F  TI  +RQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V +NG+ ++I  Y+CK GDVI +K+       V    +     +VP +I ++   +    
Sbjct: 117 VTINGKVLDIAGYQCKPGDVISIKENKASKKLVEGNIEFPGLANVPPHIELDKPKLTGKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 N---GKCDREWVALEINELLVVEYYSR 200


>gi|242620095|ref|YP_003002099.1| 30S ribosomal protein S4 [Aureococcus anophagefferens]
 gi|239997340|gb|ACS36863.1| 30S ribosomal protein S4 [Aureococcus anophagefferens]
          Length = 204

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 9/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    K +I RR+GE      K+   TR   PG H + R  ++  S + ++L+ KQK+
Sbjct: 1   MSRYRGPKIRIVRRLGELPGLTAKTT--TRETLPGQHKKVRGKQNNISSYSIRLQEKQKL 58

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG ++EK+  S  KEA R +G T   LI  LE RLD IVYR     TI A+RQ VNH
Sbjct: 59  RYNYG-LTEKQLFSYVKEARRLKGSTGSVLIQLLEMRLDNIVYRLGIGNTIPASRQIVNH 117

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
            H+ VNG+ V I S++C   DVIEV+ +        +  +      VP+Y+    DN+  
Sbjct: 118 GHIYVNGKKVTIPSFQCSPNDVIEVRNRVTSKELAKQYLEKPSYNTVPQYLEFEKDNLKG 177

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R+    ++    + +   L+VE+YSR
Sbjct: 178 KVKRV---AENTETNLNINELLIVEYYSR 203


>gi|295065730|ref|YP_003587670.1| ribosomal protein S4 [Anomochloa marantoidea]
 gi|251765254|gb|ACT15408.1| ribosomal protein S4 [Anomochloa marantoidea]
          Length = 201

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P +  +    L  Q +  K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTPKSRSN----LQNQLQSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    +  +   ++R  +P +++++        
Sbjct: 116 ILVNGRIVDIPSFRCKPQDIITTKDNQRSKRLIQNSIASSDRMQLPNHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LVVE+YSR
Sbjct: 176 KKIIARK---WIGLKINELLVVEYYSR 199


>gi|48527405|gb|AAT45835.1| small ribosomal protein 4 [Plagiochila porelloides]
          Length = 202

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCELGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|115605024|ref|YP_784475.1| ribosomal protein S4 [Piper cenocladum]
 gi|122164360|sp|Q06GQ8|RR4_PIPCE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|112253753|gb|ABI14474.1| ribosomal protein S4 [Piper cenocladum]
          Length = 201

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +  S    L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLIRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSSTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  + + +    V  +   A R ++P++++++        
Sbjct: 116 VLVNGRIVDIPSYRCKPRDIISTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---GVGLKINELLVVEYYSR 199


>gi|15618643|ref|NP_224929.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae CWL029]
 gi|15836265|ref|NP_300789.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae J138]
 gi|16752308|ref|NP_444565.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae AR39]
 gi|33242092|ref|NP_877033.1| 30S ribosomal protein S4 [Chlamydophila pneumoniae TW-183]
 gi|7388204|sp|Q9Z7H2|RS4_CHLPN RecName: Full=30S ribosomal protein S4
 gi|4377038|gb|AAD18872.1| S4 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
 gi|7188952|gb|AAF37909.1| ribosomal protein S4 [Chlamydophila pneumoniae AR39]
 gi|8979105|dbj|BAA98940.1| S4 ribosomal protein [Chlamydophila pneumoniae J138]
 gi|33236602|gb|AAP98690.1| ribosomal protein S4 [Chlamydophila pneumoniae TW-183]
 gi|269302522|gb|ACZ32622.1| ribosomal protein S4 [Chlamydophila pneumoniae LPCoLN]
          Length = 209

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K+++ RR G N++GR ++P+  + + PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRVARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    FKE    +G+ +   +   E RLD +VYR  F  TIFAA+Q V H H
Sbjct: 60  CYGMIMEKQLVKAFKEVIHKQGNVAQMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+  S+  + G  I +K+KSK+L SV +A +   E  +P YIS++        
Sbjct: 120 ILVNGRRVDRRSFFLRPGMQISLKEKSKRLQSVKDALESKDESSLPSYISLDKTGFKGEL 179

Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205
           +  P   + +   P+ +  ++V EF S
Sbjct: 180 LVSPEQDQIEAQLPLPINISVVCEFLS 206


>gi|41323139|gb|AAR99799.1| small ribosomal protein 4 [Plagiochila tabinensis]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGXLPGLTSKTLESKSNY---MDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  +E RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLIEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P ++  +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|41323111|gb|AAR99785.1| small ribosomal protein 4 [Plagiochila fruticosa]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IERSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMCIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LV+E+YSR
Sbjct: 177 NQMINR---EWLNLQINELLVLEYYSR 200


>gi|48527365|gb|AAT45815.1| small ribosomal protein 4 [Plagiochila deflexirama]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQILLQLLEMRSDNTIFRLSMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ILINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|6002083|emb|CAA58951.1| ribosomal protein S4 [Smilax aspera]
          Length = 196

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----KSGSDLKNQLRSRKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K + +  A +  +   + R ++P++++++        
Sbjct: 116 ILVNGRVVDIPSYRCKPQDIITPKDEQRSKALIQNSIASSPREELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|48527425|gb|AAT45845.1| small ribosomal protein 4 [Plagiochila trichostoma]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI R +G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRXKIIRCLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ N   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|296394891|ref|YP_003659775.1| 30S ribosomal protein S4 [Segniliparus rotundus DSM 44985]
 gi|296182038|gb|ADG98944.1| ribosomal protein S4 [Segniliparus rotundus DSM 44985]
          Length = 201

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  K     RSY PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPITRRSRRLRVDLVGGDK-AFERRSYPPGQHGRSRIKESEYL-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++F++ ++EA R  G T  NL+  LE+RLD ++YRA    T   ARQ V H H
Sbjct: 59  TYG-VMERQFQNYYREAHRRPGKTGENLLRILETRLDNVIYRAGLARTRRHARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVN + V++ SYR  + D+I+V+++S        A +   +R VP ++ V   ++    
Sbjct: 118 FLVNQKRVDVPSYRVSQYDIIDVREQSAHADPFEIAREYYGDRPVPGWLQVVEGSLRIFV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              P   +     V +Q  L+VEFYS+
Sbjct: 178 HAEPVREQ---IDVPLQEQLIVEFYSK 201


>gi|41323095|gb|AAR99777.1| small ribosomal protein 4 [Plagiochila carringtonii]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       ++  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSRTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGISPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|328541088|gb|AEB21768.1| ribosomal protein S4 [Zoopsis setulosa]
          Length = 199

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     +Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGTLPGLTSKTAKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHGHIAI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + +++   L +   +P +++ +   +  +  + 
Sbjct: 117 NYNIVDIPSYNCEPGDIITIRDKQKSQSVIIKNINLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|290487076|gb|ADD29922.1| ribosomal protein S4 [Nerium oleander]
          Length = 201

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I VK + K  A + ++   +   ++P ++ +         
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITVKDEQKSKALIQKSLDSSPHEELPSHLILQPFQYNGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|293977953|ref|YP_003543383.1| 30S ribosomal protein S4P [Candidatus Sulcia muelleri DMIN]
 gi|292667884|gb|ADE35519.1| SSU ribosomal protein S4P [Candidatus Sulcia muelleri DMIN]
          Length = 196

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 14/208 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQKM 58
           M++    K KI R+ GE ++G        + Y PG H     R  K +++  QL  KQK+
Sbjct: 1   MARYIGPKTKISRKFGELIYGNTNKSFEKKKYPPGQHANSSSRNIKKTFYSTQLLEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I E++F  +F +A + +G     L+   ESRLD IVYR     +   ARQ V+H
Sbjct: 61  KYTYG-ILERQFLKMFYKASKKKGIKGEILLQLCESRLDNIVYRLNLSHSRPEARQLVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
           RH+ VNG+ VNI S+  K GD I +K+K K   + L  S        +++S +++ M+  
Sbjct: 120 RHITVNGKIVNIPSFNLKPGDKISLKEKHKANKNKLLGS--------DWLSWDNEKMIGI 171

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F  IP+  +       +   L+VE YS+
Sbjct: 172 FKYIPNRNQ---ITENINEKLIVELYSK 196


>gi|48527369|gb|AAT45817.1| small ribosomal protein 4 [Plagiochila dura]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI+RR G       K+  +  SY   +       K S + ++L   QK++ 
Sbjct: 1   MSRYRGPRVKINRRXGSLPGLTSKALKSKSSY---IDRSTSNKKISQYRIRLEENQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYSCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|152965078|ref|YP_001360862.1| ribosomal protein S4 [Kineococcus radiotolerans SRS30216]
 gi|151359595|gb|ABS02598.1| ribosomal protein S4 [Kineococcus radiotolerans SRS30216]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 7/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K +I R +G  L  +    ++ R Y PG+HG+++K K S +  QLR KQ+++  Y  +S
Sbjct: 6   PKVRISRALGVALTPKAARFMDRRPYPPGMHGRKQK-KASDYATQLREKQRLRFQYD-VS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R  +  A R  G T  NL+  LE+RLD +V+RA F  TI+ ARQ V HRH++V+GR
Sbjct: 64  ETQLRRAYDLAKRKPGKTGQNLVQLLETRLDAVVWRAGFARTIYQARQMVVHRHIVVDGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPS 184
            V+  S+R   G  IEV  +SK     + A +   ++ ++P +++V  +++ AT   +P 
Sbjct: 124 RVDRPSFRVVVGQTIEVAPRSKTKTPFIVAREGGWSDNEIPGWLAVEREDLTATVNALPV 183

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV     LVVE+YSR
Sbjct: 184 REQ---IPVTCDEQLVVEYYSR 202


>gi|48527415|gb|AAT45840.1| small ribosomal protein 4 [Plagiochila satoi]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCELGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|62184658|ref|YP_219443.1| 30S ribosomal protein S4 [Chlamydophila abortus S26/3]
 gi|81313156|sp|Q5L799|RS4_CHLAB RecName: Full=30S ribosomal protein S4
 gi|62147725|emb|CAH63469.1| putative 30s ribosomal protein s4 [Chlamydophila abortus S26/3]
          Length = 209

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  + + PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRSRNPLFKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    FKE    +G  +   +   E RLD +VYR  F  TIFAA+Q V H H
Sbjct: 60  CYGMILEKQLVKAFKEVVNKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  + +++KS++L SV E+ +   E   P YISV+  N     
Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLREKSRKLQSVKESLENKDESSFPSYISVDKSNFKGEL 179

Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205
           +  P   + +   P+ +  ++V EF S
Sbjct: 180 LISPEQDQIEAQLPLPVDVSVVCEFLS 206


>gi|290487070|gb|ADD29919.1| ribosomal protein S4 [Lonicera japonica]
          Length = 197

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 17/209 (8%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P+          GQ R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTKKGPI----------GQSRSVKKSQYRIRLEEKQKLRF 50

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 51  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 109

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           +LVNGR V+I SYRCK  D+I  + +    A +  +   +   +  +P+++++       
Sbjct: 110 ILVNGRIVDIPSYRCKPRDIITARDEQNSRALIQNSLNSSPHKKNKLPKHLTLQPFQYKG 169

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  S       + +   LVVE+YSR
Sbjct: 170 LVNQIIDSK---WVGLKINELLVVEYYSR 195


>gi|77862557|gb|ABB04551.1| small ribosomal protein 4 [Ricciocarpos natans]
          Length = 202

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N  +V+I SY CK  DVI +K + K  + + +     ++  +P +++ +   +    
Sbjct: 117 ILINNSTVDIPSYNCKPKDVITIKDRPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWIFLKINELLVVEYYSR 200


>gi|48527403|gb|AAT45834.1| small ribosomal protein 4 [Plagiochila poeltii]
          Length = 202

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       ++  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSRTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGISPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|255349010|ref|ZP_05381017.1| 30S ribosomal protein S4 [Chlamydia trachomatis 70]
 gi|255503549|ref|ZP_05381939.1| 30S ribosomal protein S4 [Chlamydia trachomatis 70s]
          Length = 209

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  +   PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    +KE    + + +   +   E RLD IVYR  F  TIFAA+Q V+H H
Sbjct: 60  CYGMILEKQLVKAYKEVINKQRNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  I +K+KSK+LA V E+ +   +  +P Y+S++        
Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179

Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205
           V  P   +     P+ +  +++ EF S
Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206


>gi|329942329|ref|ZP_08291139.1| ribosomal protein S4 [Chlamydophila psittaci Cal10]
 gi|313847567|emb|CBY16555.1| putative 30s ribosomal protein s4 [Chlamydophila psittaci RD1]
 gi|325507112|gb|ADZ18750.1| 30S ribosomal protein S4 [Chlamydophila psittaci 6BC]
 gi|328815239|gb|EGF85227.1| ribosomal protein S4 [Chlamydophila psittaci Cal10]
 gi|328914200|gb|AEB55033.1| ribosomal protein S4 [Chlamydophila psittaci 6BC]
          Length = 209

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 119/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  + + PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    FKE    +G  +   +   E RLD +VYR  F  TIFAA+Q V H H
Sbjct: 60  CYGMILEKQLVKAFKEVVNKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  + +K+KS++L SV E+ +   E   P YISV+  N     
Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLKEKSRKLQSVKESLENKDESSFPSYISVDKSNFKGEL 179

Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205
           +  P   + +   P+ +  ++V EF S
Sbjct: 180 LVSPEQDQIEAQLPLPVDVSVVCEFLS 206


>gi|11466704|ref|NP_039300.1| ribosomal protein S4 [Marchantia polymorpha]
 gi|133956|sp|P06358|RR4_MARPO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|11674|emb|CAA28086.1| rps4 [Marchantia polymorpha]
 gi|222103416|gb|ACM44237.1| small ribosomal protein subunit 4 [Marchantia polymorpha]
          Length = 202

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+      Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKLKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N  +V+I SY CK  DVI +K +SK  + +++     ++  +P +++ +   +    
Sbjct: 117 ILINNNTVDIPSYNCKPKDVITIKDRSKSQSIIIKNLNSFQKQKIPNHLTFDLMQIKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWIYLKINELLVVEYYSR 200


>gi|225544126|ref|YP_002720114.1| rps4 [Jatropha curcas]
 gi|224979567|gb|ACN72694.1| rps4 [Jatropha curcas]
          Length = 201

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGIASTIPRARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  DVI V+ + K  A +      + + ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDVITVRDEQKSRAMIPNYLDSSPQEELPKHLTLHPIQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WGGLKINELLVVEYYSR 199


>gi|118626045|emb|CAL41747.1| small ribosomal protein 4 [Jungermannia caespiticia]
          Length = 203

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRIKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD I VK K K    + +   L ++  +P +++ N   +  + 
Sbjct: 117 ISVNNDIVDIPSYNCELGDFITVKNKQKSQLIITKNVNLFQKLKIPTHLTFNSIELRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 NQTITR---ESVNLKINELLVVEYYSR 200


>gi|41323101|gb|AAR99780.1| small ribosomal protein 4 [Chiastocaulon dendroides]
 gi|41323103|gb|AAR99781.1| small ribosomal protein 4 [Chiastocaulon dendroides]
          Length = 202

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K   +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKILKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLVKYMRIARKAKGSTGQLLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|124112120|ref|YP_001019095.1| ribosomal protein S4 [Chlorokybus atmophyticus]
 gi|152060548|sp|Q19VA6|RR4_CHLAT RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|124012227|gb|ABD62252.2| ribosomal protein S4 [Chlorokybus atmophyticus]
          Length = 203

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 5/206 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G +L G        ++       +  K + S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKIVRRLG-DLPGFTNKIQKRQASTQNKGKKTAKKRLSQYSIRLQEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++     ++A R +G T   L+  LE RLD I+YR    PTI  ARQ VNH H
Sbjct: 60  NYG-VTERQLLLYVRKARRIKGSTGQILLQQLEMRLDNIIYRLGMAPTIANARQLVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           ++VN R V I SYRCK  D+I V+  S     +      ++  +P ++S   +++VA   
Sbjct: 119 IVVNDRIVTIPSYRCKPKDIISVRNNSTSRNVITNNLSFSDSRLPPHLSFKKESLVALVN 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +         P+ +   LVVE+YSR
Sbjct: 179 GLVDRQ---WIPLNINELLVVEYYSR 201


>gi|121761863|gb|ABM65017.1| ribosomal protein S4 [Plagiomnium cf. tezukae Wyatt 1808]
          Length = 202

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE+RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLETRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N     
Sbjct: 117 ILVNDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPDHLTYNSLNKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQILDRD---SIDLKINELLVVEYYSR 200


>gi|89898802|ref|YP_515912.1| 30S ribosomal protein S4 [Chlamydophila felis Fe/C-56]
 gi|123482660|sp|Q252M1|RS4_CHLFF RecName: Full=30S ribosomal protein S4
 gi|89332174|dbj|BAE81767.1| 30S ribosomal protein S4 [Chlamydophila felis Fe/C-56]
          Length = 209

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  + + PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    FKE    +G  +   +   E RLD +VYR  F  TIFAA+Q V H H
Sbjct: 60  CYGMILEKQLVKAFKEVVHKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  + +K+KS++L SV E+ +   E  +P YIS++  N     
Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLKEKSRKLQSVQESLENKDESSLPSYISLDKGNFKGEL 179

Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205
           +  P   + +   P+ +  ++V EF S
Sbjct: 180 LMSPEQDQMEAQLPLPVDISVVCEFLS 206


>gi|15835528|ref|NP_297287.1| 30S ribosomal protein S4 [Chlamydia muridarum Nigg]
 gi|270285715|ref|ZP_06195109.1| 30S ribosomal protein S4 [Chlamydia muridarum Nigg]
 gi|301337109|ref|ZP_07225311.1| 30S ribosomal protein S4 [Chlamydia muridarum MopnTet14]
 gi|13633873|sp|Q9PJB7|RS4_CHLMU RecName: Full=30S ribosomal protein S4
 gi|7190943|gb|AAF39707.1| ribosomal protein S4 [Chlamydia muridarum Nigg]
          Length = 209

 Score =  185 bits (469), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  +   PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    +KE    +G+ +   +   E RLD IVYR  F  TIFAA+Q V+H H
Sbjct: 60  CYGMILEKQLVKAYKEVVHKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  I +K+KS++LA V E+ +   +  +P Y+S++        
Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSRRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179

Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205
           V  P   +     P+ +  +++ EF S
Sbjct: 180 VVSPELDQISSQLPLPVNVSVICEFLS 206


>gi|91200693|emb|CAJ73744.1| strongly similar to 30S ribosomal protein S4 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 208

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++    + ++ RR GE L+ +       K  +  R Y PG     R     Y G+Q R 
Sbjct: 1   MARYVGPQCRLCRREGEKLFLKGFRCETAKCAITKRKYPPGQFSWGRGKLSKY-GIQFRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K++YG + E++FR+ F++A++ +G+T  NL+  LE RLD +V+   F  +  +ARQ
Sbjct: 60  KQKVKRFYGVL-ERQFRNYFRKAEKQKGNTGDNLLVMLERRLDNVVHLLTFAHSRKSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHD 173
            + H +V VN + V+I S+  K GDVI  K   +    V + ++ L  R +  ++     
Sbjct: 119 LILHGNVTVNDKKVDIASFLVKVGDVIRPKNSERSRKLVQDNAEALKSRKISSWLEFRQG 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +     ++P+        V +Q  L++E  S+
Sbjct: 179 ALEGVVTQLPNRDD---ISVSVQEQLIIELCSK 208


>gi|256825859|ref|YP_003149819.1| 30S ribosomal protein S4 [Kytococcus sedentarius DSM 20547]
 gi|256689252|gb|ACV07054.1| SSU ribosomal protein S4P [Kytococcus sedentarius DSM 20547]
          Length = 202

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G  KS  + R Y PG+HG+RR  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPITKKSRRLKVDLVGSDKS-FDARPYPPGMHGRRRTQEKEYLA-QLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + EA R  G T  NL++ LESRLD ++YRA   PT  AARQ V H H
Sbjct: 59  MYG-VMEKQFRRYYAEAARRPGKTGDNLLTILESRLDNVIYRAGIAPTRRAARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            L+NG+ V++ S +  + D+I+V+ KS +      A +   ER VP ++ V   ++    
Sbjct: 118 FLLNGQRVDVPSIQVSKFDIIDVRPKSAETQPFEIARETFGERPVPAWMKVVPGSLRVLI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              P   +      ++   L+VE YS+
Sbjct: 178 FDRPVREQ---IDTVLAEQLIVELYSK 201


>gi|222103560|gb|ACM44309.1| small ribosomal protein subunit 4 [Aulacomnium turgidum]
          Length = 202

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +   L ++  +P +++ +        
Sbjct: 117 ILVNDHIVDIPSYRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|26399192|sp|Q9M4C2|RR4_RICNA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|8017981|emb|CAB92155.1| small ribosomal protein 4 [Ricciocarpos natans]
          Length = 202

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTLKSKPGY---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N  +V+I SY CK  DVI +K + K  + + +     ++  +P +++ +   +    
Sbjct: 117 ILINNSTVDIPSYNCKPKDVITIKDRPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWIFLKINELLVVEYYSR 200


>gi|194246704|ref|YP_002004343.1| 30S ribosomal protein S4 [Candidatus Phytoplasma mali]
 gi|254764605|sp|B3QZW0|RS4_PHYMT RecName: Full=30S ribosomal protein S4
 gi|193807061|emb|CAP18497.1| SSU ribosomal protein S4 [Candidatus Phytoplasma mali]
          Length = 199

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  K+ RR+  +L    K  +  R Y PG+HG++R  K   +GLQL+ KQK++ 
Sbjct: 1   MSRYTGSIWKVSRRLNYSLSETGKE-LIKRPYAPGMHGKKR-IKAKDYGLQLQEKQKVRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+F+ IFK+A + +G      +  LESRLD +VYR  F  T   ARQ VNH H
Sbjct: 59  TYG-ISEKQFKKIFKDAGKLKGIHGEMFLFLLESRLDNVVYRLGFAKTRQQARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I SY  + G +I +K+KSK L  V EA       V +YIS+N + +V  +V
Sbjct: 118 ILVDGKKVDIPSYSLRVGQIITLKEKSKDLIIVKEALANKLNRV-DYISLNKE-LVGKYV 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP   + +P    ++  L+VEFY+R
Sbjct: 176 RIPHRDELLP---NIKEQLIVEFYNR 198


>gi|123965706|ref|YP_001010787.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9515]
 gi|152112247|sp|A2BV69|RS4_PROM5 RecName: Full=30S ribosomal protein S4
 gi|123200072|gb|ABM71680.1| 30S ribosomal protein S4 [Prochlorococcus marinus str. MIT 9515]
          Length = 202

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      K+    +S  PG HGQ R+ +  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRLRVTRRLGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE++     K+A    G T  NL+  LE+RLD + +R  F  TI  +RQ VNH H
Sbjct: 58  NYG-VSERQLVRYVKKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           V VNG+ ++I  Y+CK GDVI +K+K      V    +     +VP +I ++   +    
Sbjct: 117 VTVNGKVLDIAGYQCKSGDVISIKEKKASKKLVEGNIEFPGLANVPPHIELDKPKLTGKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 N---GKCDREWVALEINELLVVEYYSR 200


>gi|26399172|sp|Q9FSE4|RR4_PLAAD RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|10798670|emb|CAC12828.1| small ribosomal protein 4 [Plagiochila adiantoides]
          Length = 202

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRS 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LAERQLLKYMRIARKAKGSTGQILLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K    + +     +R  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|6002075|emb|CAA58946.1| ribosomal protein S4 [Ranunculus lingua]
          Length = 196

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    + G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +  D +P++++++      + 
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNFMDSSPHDELPKHLTLHPSQYKGSV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196


>gi|67035564|gb|AAY62713.1| small ribosomal protein subunit 4 [Arctoa fulvella]
          Length = 199

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K   K  A +++    +++  VP +++ N         +I
Sbjct: 117 NDHIVNIPSYRCKPQDFITIKNCQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|89147830|gb|ABD62763.1| ribosomal protein 4 [Lophocolea heterophylla]
          Length = 200

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG
Sbjct: 2   YRGPRVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +
Sbjct: 59  -LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHGHISI 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++
Sbjct: 118 NNYIVDIPSYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQM 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 178 INR---EWINLKINELLVVEYYSR 198


>gi|139387442|ref|YP_001122796.1| ribosomal protein S4 [Phaseolus vulgaris]
 gi|152060557|sp|A4GG95|RR4_PHAVU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|112030964|gb|ABH88076.1| ribosomal protein S4 [Phaseolus vulgaris]
 gi|158187159|gb|ABW22792.1| ribosomal protein S4 [Phaseolus vulgaris]
          Length = 201

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G       K P         L  Q R SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPCFKKIRRLGYLPGLTSKKPTVKNE----LRNQLRFSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + +++G T   L+  LE RLD I++R     TI  ARQF+NHRH
Sbjct: 57  HYG-LTERQLLKYVRISGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPQARQFINHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  K + K    +      A RD +P +++V+        
Sbjct: 116 VLVNGRIVDIPSYRCKPQDIITAKDEQKSKTLIQNYLDSAPRDKLPNHLTVHPFQYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 176 NQIIDNK---WVGLKINELLVVEYYSR 199


>gi|328541078|gb|AEB21763.1| ribosomal protein S4 [Acromastigum cavifolium]
          Length = 199

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+  +  SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTSKTLKSKSSY---NDRSASNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNMVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINIKINELLVVEYYSR 197


>gi|255507228|ref|ZP_05382867.1| 30S ribosomal protein S4 [Chlamydia trachomatis D(s)2923]
 gi|289525669|emb|CBJ15150.1| SSU ribosomal protein S4P [Chlamydia trachomatis Sweden2]
 gi|296435236|gb|ADH17414.1| 30S ribosomal protein S4 [Chlamydia trachomatis E/150]
 gi|296438955|gb|ADH21108.1| 30S ribosomal protein S4 [Chlamydia trachomatis E/11023]
          Length = 209

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  +   PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRGRNPLLRKPNPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    +KE    + + +   +   E RLD I+YR  F  TIFAA+Q V+H H
Sbjct: 60  CYGMILEKQLVKAYKEVINKQRNVAQMFLEKFECRLDNIIYRLGFAKTIFAAQQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  I +K+KSK+LA V E+ +   +  +P Y+S++        
Sbjct: 120 VLVNGKKVDRRSFFVRPGMQISLKEKSKRLAIVTESLENKDQSSLPAYLSLDKAAFKGEL 179

Query: 180 VRIPSSLKDVP-YPVIMQPNLVVEFYS 205
           V  P   +     P+ +  +++ EF S
Sbjct: 180 VVAPELDQIASQLPLPVNVSVICEFLS 206


>gi|29839780|ref|NP_828886.1| 30S ribosomal protein S4 [Chlamydophila caviae GPIC]
 gi|33301548|sp|Q824X7|RS4_CHLCV RecName: Full=30S ribosomal protein S4
 gi|29834127|gb|AAP04764.1| ribosomal protein S4 [Chlamydophila caviae GPIC]
          Length = 209

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 3/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  + + PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+    FKE    +G  +   +   E RLD +VYR  F  TIFAA+Q V+H H
Sbjct: 60  CYGMILEKQLVKAFKEVINKQGSVTKMFLERFECRLDNMVYRMGFAKTIFAAQQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  + +K+KS++L SV E+ +   E  +P YISV+  N     
Sbjct: 120 VLVNGKKVDRRSFFLRPGMQVSLKEKSRKLQSVQESLENRDEGSLPSYISVDKGNFKGEL 179

Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205
           +  P   + +   P+ +  ++V EF S
Sbjct: 180 LVSPEQDQIEAQLPLPVDVSVVCEFLS 206


>gi|166239980|gb|ABY86508.1| ribosomal protein S4 [Lychnis chalcedonica]
          Length = 205

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 107/209 (51%), Gaps = 9/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYVRIARKAKGATGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMVA 177
           +LVNGR V+I SYRCK  D I  K + K    +      +   ++P++++++    N  A
Sbjct: 116 ILVNGRIVDIPSYRCKPQDTIMAKDEQKSRVLIQNFLDSSPPEELPKHLTLDPFPYNNKA 175

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               I  S       + +   LVVE+YSR
Sbjct: 176 IIKEIIDS-NSKWVGLKINELLVVEYYSR 203


>gi|68164805|ref|YP_247601.1| ribosomal protein S4 [Cucumis sativus]
 gi|75317263|sp|Q4VZH3|RR4_CUCSA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|67511400|emb|CAJ00760.1| ribosomal protein S4 [Cucumis sativus]
          Length = 201

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRRPRFKKIRRLGALPGLTSKRP----KTGNDLKNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K + K    +      +  +++P+++++         
Sbjct: 116 ILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVSLKINELLVVEYYSR 199


>gi|6002089|emb|CAA58954.1| ribosomal protein S4 [Typha angustifolia]
          Length = 196

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K   K    +  +    A  ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDNQKSKGLIQNSIASAAHEELPKHLTIDSFQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|169805298|gb|ACA83748.1| ribosomal protein S4 [Conostomum pentastichum]
          Length = 202

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N        
Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541124|gb|AEB21786.1| ribosomal protein S4 [Acromastigum divaricatum]
          Length = 199

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+  +  S+           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTGKTLKSKSSH---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSIDQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|3098148|gb|AAC15522.1| small ribosomal protein 4 [Encalypta rhaptocarpa]
          Length = 199

 Score =  184 bits (467), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +V+R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A +++    +++  VP ++S +         +I
Sbjct: 117 NDCIVNIPSYRCKPQDFISIKDRQKSQAIIIKNIDFSQKSKVPNHLSFDSLQKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|26399087|sp|O78678|RR4_OROMI RecName: Full=Plastid 30S ribosomal protein S4
 gi|3421346|emb|CAA07624.1| ribosomal protein S4 [Orobanche minor]
          Length = 203

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P   +        Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRPKAEKDLI----NQSRFVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  K K +    +  +   +    +P +++++        
Sbjct: 116 VLVNGRIVDIPSYRCKPLDIITAKDKQQSRTLIQNSLNSSPHAKIPNHLTLDLFQYKGIV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +S       + +   L+VE+YSR
Sbjct: 176 NQIINSK---WVGLKINEFLIVEYYSR 199


>gi|294337258|emb|CAQ52778.1| ribosomal protein S4 [Rigodium implexum]
          Length = 202

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541126|gb|AEB21787.1| ribosomal protein S4 [Paracromastigum drucei]
          Length = 199

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+  +  SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTGKTLKSKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHIAI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCQPGDTITIRDKQKSQSIITKNINLFQDLKIPSHLTFDSRKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197


>gi|149390270|ref|YP_001294100.1| ribosomal protein S4 [Chloranthus spicatus]
 gi|172048687|sp|A6MMC4|RR4_CHLSC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|146744190|gb|ABQ43262.1| ribosomal protein S4 [Chloranthus spicatus]
          Length = 201

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D+I  + + +    +      +   ++P++++++        
Sbjct: 116 ILVNSRIVDIPSYRCKPRDIITTRDEQRSRTLIQNHIDSSPHEELPKHLTLHSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---SIGLKINELLVVEYYSR 199


>gi|169805300|gb|ACA83749.1| ribosomal protein S4 [Bartramia stricta]
          Length = 202

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +     ++  +P +++ N        
Sbjct: 117 ILVNDHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|118626085|emb|CAL39346.1| small ribosomal protein 4 [Jungermannia polaris]
          Length = 202

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISVNNDIVDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+ SR
Sbjct: 177 NQTINR---EWINLKINELLVVEYNSR 200


>gi|26399194|sp|Q9M4C3|RR4_PLARP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|8017979|emb|CAB92154.1| small ribosomal protein 4 [Plagiochasma rupestre]
          Length = 202

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTFKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHQH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N  +V+I SY CK  D+I +K + K  + + +     ++  +P +++ +        
Sbjct: 117 ILINNNTVDIPSYNCKPKDIITIKDRQKSQSIITKNLNFFQKQKIPNHLTFDLIQFKGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIVDR---ECIYLKINELLVVEYYSR 200


>gi|3914873|sp|O47029|RR4_NAROD RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2808630|emb|CAA58940.1| ribosomal protein S4 [Narcissus x odorus]
          Length = 196

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L    R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNPLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +  +   A R ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSIASAPREELPNHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|6002065|emb|CAA58939.1| ribosomal protein S4 [Musa x paradisiaca]
          Length = 196

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +     L+   ++P++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIALSPPEELPKHLTFDSFQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIDLKINELLVVEY 196


>gi|41323105|gb|AAR99782.1| small ribosomal protein 4 [Plagiochila disticha]
          Length = 202

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRIKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ILINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LV E+YSR
Sbjct: 177 NQMINR---EWINLKINELLVAEYYSR 200


>gi|11467651|ref|NP_050703.1| ribosomal protein S4 [Guillardia theta]
 gi|133950|sp|P17072|RR4_GUITH RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|70879|pir||R3MD4 ribosomal protein S4, chloroplast - Cryptomonas sp. chloroplast
           (strain phi)
 gi|3602976|gb|AAC35637.1| ribosomal protein S4 [Guillardia theta]
          Length = 200

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   +  KI RR+GE           TR+  PG HG  +  KPS + ++L  KQK++ 
Sbjct: 1   MSRYRGAVIKIIRRLGELPGLT--RKTTTRTSRPGQHG-TQARKPSEYAIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     + A R +G T   L+  LE RLD +++R    PTI AARQ VNH H
Sbjct: 58  NYG-LTEKQLLQYVRTAKRIKGSTGEALLQLLEMRLDNVIFRLGMAPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VN   V+I SY+CK GD+I ++Q  K  + V    Q     ++P ++ ++ DN+    
Sbjct: 117 IKVNNTRVSIPSYQCKAGDMISIRQHPKSQSIVKNYLQFPGLANMPNHLQIDKDNLTGKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          V +   L+VE+YSR
Sbjct: 177 NGIIERD-----WVALNELLIVEYYSR 198


>gi|295136909|ref|YP_003587741.1| ribosomal protein S4 [Lathyrus sativus]
 gi|293338631|gb|ADE43603.1| ribosomal protein S4 [Lathyrus sativus]
          Length = 201

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K     R        +   SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKELPVRRV----GSEESLSSKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  K + K    +  + + A R  VP +++++ D      
Sbjct: 116 VLVNGRIVDIPSYRCKPKDIITAKDEQKSRTIIQNSLKSAPRKRVPTHLTLHPDQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|118625985|emb|CAL39314.1| small ribosomal protein 4 [Symphyogyna podophylla]
          Length = 202

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRAKIIRRLGA-LPGLSHEMIGSRSGYINQLAANKK--ISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARGAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           ++VN  +V+I SY CK  DVI ++ + +  + + +   L  ER +P +++ +      + 
Sbjct: 117 IIVNDDTVDIPSYNCKPQDVITIRDRRESQSVITKNINLFRERRIPNHLTFDSTRFCGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWIGLKINELLVVEYYSR 200


>gi|299830591|ref|YP_003735040.1| 30S ribosomal protein S4 [Durinskia baltica]
 gi|297384955|gb|ADI40254.1| 30S ribosomal protein S4 [Durinskia baltica]
          Length = 204

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K KI RR+G       K        G   +      K + +G++L  KQK+K 
Sbjct: 1   MSRYRGPKLKISRRLGSLPGLTTKKSKKLNRPGKDGNSPDTSKKLTEYGIRLEEKQKLKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E +     KEA R +G T   L+  LE RLDT+ +   F  ++  ARQ VNH H
Sbjct: 61  NYG-LTESQLFRYVKEARRRKGVTGLILLQLLEMRLDTLCFTLGFASSMAQARQLVNHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN + +NI S++C+  D I VK+KS     +    +   R ++P  +  + +++ AT 
Sbjct: 120 ITVNNKVINIPSFQCRLNDTISVKEKSSSKNLIDANLKNNPRSEIPSNLKFDSNSLKATV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   +       P+ +   LV+E+YSR
Sbjct: 180 LDYCNR---EDIPLQLDELLVIEYYSR 203


>gi|157689532|gb|ABV65322.1| ribosomal protein S4 [Oxalis latifolia]
          Length = 201

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S+      Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKPNAVNSF----RNQSRLGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGPTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           V VNGR V+I SYRCK  D I  + + K  A +      +   ++P+++++         
Sbjct: 116 VFVNGRVVDIPSYRCKPRDFITPRNEQKSRALIRNYLDSSTHEELPKHLTLYPLQCKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|294337188|emb|CAQ52744.1| ribosomal protein S4 [Lembophyllum clandestinum]
          Length = 202

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N        
Sbjct: 117 ILVNDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337142|emb|CAQ52721.1| ribosomal protein S4 [Heterocladium macounii]
          Length = 202

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  VP++++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKVPDHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541130|gb|AEB21789.1| ribosomal protein S4 [Telaranea wallichiana]
          Length = 202

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + K+ RR+G       K+     SY           K S + ++L  KQK++ +
Sbjct: 2   SRYRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTLNKKVSQYRIRLEEKQKLRFH 58

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+
Sbjct: 59  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHI 117

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
            +N   V+I SY C+ GDVI +K K K  + + +   L +   +P ++  +   +  +  
Sbjct: 118 SINNNIVDIPSYNCEPGDVITIKDKQKSRSIITKNINLFQNLKIPSHLIFDSIKLCGSIN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +        + +   LVVE+YSR
Sbjct: 178 QTINR---EWINLKINELLVVEYYSR 200


>gi|157689410|gb|ABV65261.1| ribosomal protein S4 [Alnus viridis subsp. sinuata]
          Length = 197

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 9/203 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K  RR+G       K P      G  L  Q R SK S + ++L  KQK++ +YG 
Sbjct: 1   RGPRFKKIRRLGALPGLTSKRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 56  LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
           GR V+I SYRCK  D+I  + + K  A +      + R ++P+++++          +I 
Sbjct: 116 GRIVDIPSYRCKPHDIITARDEQKSRALIQNYLDSSPREELPKHLTLQPFQYKGLVNQII 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            S       + +   LVVE+YSR
Sbjct: 176 DSQ---WVGLKINELLVVEYYSR 195


>gi|46810988|gb|AAT01812.1| small ribosomal protein 4 [Anastrophyllum michauxii]
          Length = 197

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +V+I SY C+ GD+I ++ K K  + V +   L ++  +P +++ +   +  +  +  +
Sbjct: 117 DTVDIPSYNCEPGDIITIRSKQKSQSIVTKNINLFQKLKIPSHLTFDLTQLRGSVNQTVN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWVDLKINELLVVEYYSR 195


>gi|160902229|ref|YP_001567810.1| RNA-binding S4 domain-containing protein [Petrotoga mobilis SJ95]
 gi|189045390|sp|A9BFZ1|RS4_PETMO RecName: Full=30S ribosomal protein S4
 gi|160359873|gb|ABX31487.1| RNA-binding S4 domain protein [Petrotoga mobilis SJ95]
          Length = 211

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 90/217 (41%), Positives = 134/217 (61%), Gaps = 17/217 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      K+ RR G NL+ + K      S +  R+Y PG HG R+K K + + +QLR+
Sbjct: 1   MARYIGPLEKLSRREGINLYLKGKRSYTEKSALRKRNYVPGQHG-RQKQKLTQYAMQLRS 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
           KQ +K+ YG + E++FR+ F+EA+RSR  +T   L+  LE RLD++VY+  F P    AR
Sbjct: 60  KQALKRMYG-LMERQFRNTFEEAERSRSGETGEVLMQLLERRLDSVVYQMGFAPNRRTAR 118

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE---RDVPEYISV 170
           Q V H H+LVNG+ VNI SYR K GDVIEVK+KS+ +  V E  +L +   R++P +++V
Sbjct: 119 QIVTHGHILVNGKKVNIPSYRVKVGDVIEVKEKSRNIQQVREGLELVQEGYRNIPNWLNV 178

Query: 171 NHDNMVATFVRIPSSLK-DVPYPVIMQPNLVVEFYSR 206
             +N   TF R+P   + DVP P+      ++E YS+
Sbjct: 179 EIENFRGTFQRLPKIDEMDVPVPLTN----IIELYSK 211


>gi|157689430|gb|ABV65271.1| ribosomal protein S4 [Bulnesia arborea]
          Length = 200

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P            Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRPKAKTIT----RNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  +E RLD I++R     TI  ARQFVNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKTKGSTGQVLLQLIEMRLDNILFRLGMASTIPQARQFVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVN   VNI SYRCK  D+I V+   K    V        +++ +++++          
Sbjct: 116 ILVNDHIVNIPSYRCKPRDIITVRDNQKSRTLVQNYLDSPNQELAKHLTLQPFQYKGLVN 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I  S       + +   LVVE+YSR
Sbjct: 176 QIIDSK---WVGLRINELLVVEYYSR 198


>gi|11465479|ref|NP_045130.1| ribosomal protein S4 [Cyanidium caldarium]
 gi|14195190|sp|Q9TLY7|RR4A_CYACA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|6466382|gb|AAF12964.1|AF022186_87 unknown [Cyanidium caldarium]
          Length = 202

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 115/207 (55%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K +I RR+GE      K   N  +Y PG        + S + ++L+ KQK++ 
Sbjct: 1   MSRYTGPKIRIIRRLGELPALTTKKVKN--NYPPG-REWSTNEELSEYAIRLQEKQKIRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+EK+ R   K+A +SRG T   L++ LE RLD IV RA   PTI A+RQ V+H+H
Sbjct: 58  NYG-INEKQLRRYVKKAKKSRGSTGSYLLNLLEMRLDNIVLRAGLAPTIAASRQLVSHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATF 179
           + VN + VNI S++C  GD I VK+ +K    + L + +   +  P+Y+ VN DNM A  
Sbjct: 117 IEVNNKIVNIPSFQCSIGDTIHVKKSNKSRQLIDLNSRRDTTKFFPKYLEVNKDNMGARV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V+           + +   LVVEFYSR
Sbjct: 177 VKTMDKQD---VNLTINELLVVEFYSR 200


>gi|255002915|ref|ZP_05277879.1| 30S ribosomal protein S4 [Anaplasma marginale str. Puerto Rico]
 gi|255004043|ref|ZP_05278844.1| 30S ribosomal protein S4 [Anaplasma marginale str. Virginia]
          Length = 203

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 96/198 (48%), Positives = 130/198 (65%), Gaps = 2/198 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G NLWGR K PV TR+Y PG HG     K S FG Q  A QK K YY  +S 
Sbjct: 7   KYRASRRLGVNLWGRSKDPVATRNYPPGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 65

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+ R+ F  A   +GDT  NL+  LESRL  +VY A FVPT+F+ARQ V+H+HV VNG+ 
Sbjct: 66  KQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 125

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI S+  K GDV+++++++ +L  VL A Q  ER VP+++ V+     A ++R+P   +
Sbjct: 126 VNIPSFSVKPGDVVQIRERATELPMVLAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE 185

Query: 188 DVPYPVIMQPNLVVEFYS 205
            VPYP  M+ NLVVEF+S
Sbjct: 186 -VPYPANMEVNLVVEFFS 202


>gi|156618828|ref|YP_001430110.1| ribosomal protein S4 [Cuscuta reflexa]
 gi|171769780|sp|A7M968|RR4_CUSRE RecName: Full=Plastid 30S ribosomal protein S4
 gi|156556013|emb|CAM98396.1| ribosomal protein S4 [Cuscuta reflexa]
          Length = 201

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P   R     L  Q R  K S++ ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRPRTVR----DLRNQSRSGKKSHYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++  S  + A +++G T   LI  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLISYVRIARKAKGSTGEVLIQLLEMRLDNILFRLGMAYTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K K K  A +  + +   R ++P +++++        
Sbjct: 116 ILVNGHIVDIPSYRCKPRDIITSKDKPKSGALIKNSIKAFPREELPNHLTLHPAPYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 176 NQIIDTK---WVGLKINELLVVEYYSR 199


>gi|149390444|ref|YP_001294272.1| ribosomal protein S4 [Illicium oligandrum]
 gi|172048705|sp|A6MMU6|RR4_ILLOL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|147917397|gb|ABQ52521.1| ribosomal protein S4 [Illicium oligandrum]
          Length = 203

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 11/209 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGSLPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMVA 177
           +LVNGR V+I SYRCK  D+I  + + +  A +  +   +++ ++P++++++        
Sbjct: 116 ILVNGRLVDIPSYRCKPRDIITTRDEHRSRALIQNSIDSSQKEELPKHLTLHSLQYQYKG 175

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  S       + +   LVVE+YSR
Sbjct: 176 LVNQIIDSK---WVGLKINELLVVEYYSR 201


>gi|212550427|ref|YP_002308744.1| 30S ribosomal protein S4 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|226697799|sp|B6YQ61|RS4_AZOPC RecName: Full=30S ribosomal protein S4
 gi|212548665|dbj|BAG83333.1| 30S ribosomal protein S4 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 197

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 112/206 (54%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI  R GE ++G  K+     S        RRK K S +G+QLR KQK K 
Sbjct: 1   MARYIGPKTKIACRFGELIFGPDKAFSIRNSSS-----SRRKKKTSEYGIQLREKQKAKY 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E +FR  F++A RSRG T   L+  LESRLD +VYR     T   ARQ V+H+H
Sbjct: 56  IYGVL-ENQFRGFFEKASRSRGITGVVLLQLLESRLDNLVYRMGLAKTRAEARQLVSHKH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + ++   VNI SY  K G +I V++++K L  +L+    A  +   +I  +  +M A ++
Sbjct: 115 ITIDNNVVNIPSYLVKPGQIIGVRERAKSLEIILDNLIRANHNKYSWIEYDKSSMSARYL 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP  +     P  ++  L+VE YS+
Sbjct: 175 YIPERMD---IPENIKEQLIVELYSK 197


>gi|48527423|gb|AAT45844.1| small ribosomal protein 4 [Plagiochila trabeculata]
          Length = 202

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKLKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMCIARKAKGSTGEVLLQLLEMRSDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDMVNIPSYNCESGDIITIGNKKKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   L VE+YSR
Sbjct: 177 NQMINR---EWINLKINELLAVEYYSR 200


>gi|77862555|gb|ABB04550.1| small ribosomal protein 4 [Riccia ciliifera]
          Length = 201

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTFKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++       A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYIHIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N + V+I SY CK  DVI +K + K    + +     ++  +P +++ +   +     
Sbjct: 117 LINNKIVDIPSYNCKPKDVITIKDRQKSQLIITKNLNFFQKQKIPNHLTFDLIQLKGLIN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++          + +   LVVE+YSR
Sbjct: 177 QVVDR---EWIYLKINELLVVEYYSR 199


>gi|6002023|emb|CAA58918.1| ribosomal protein S4 [Alisma plantago-aquatica]
          Length = 196

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +    V       +  ++P++++V+        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKTLVQNYIASSSHEELPKHLTVDSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196


>gi|26399097|sp|P59138|RR4_CYABU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504377|emb|CAC80633.1| small ribosomal protein 4 [Cyathophorum bulbosum]
          Length = 202

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---ITQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMFPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SY+CK  D I +K + K  A + +  +  ++  +P +++ N+       
Sbjct: 117 ILVNGPIVDIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|67035598|gb|AAY62730.1| small ribosomal protein subunit 4 [Bryoxiphium norvegicum]
          Length = 202

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +
Sbjct: 119 VNDRIVNIPSYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 179 I---LDRESINLKINELLVVEYYSR 200


>gi|7524902|ref|NP_045904.1| ribosomal protein S4 [Chlorella vulgaris]
 gi|417720|sp|P32975|RR4_CHLVU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|285704|dbj|BAA01767.1| ribosomal protein S4 ['Chlorella' ellipsoidea]
 gi|2224496|dbj|BAA57980.1| 30S ribosomal protein S4 [Chlorella vulgaris]
          Length = 207

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 113/212 (53%), Gaps = 13/212 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54
           M++    K +I RR+GE      K+   TR + PG HG ++K      +K S + ++L+ 
Sbjct: 1   MARYRGPKLRIVRRLGELPGLTQKN--CTRDFPPGQHGPKKKGGGNQKTKESQYAVRLKE 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++  YG ISE++  S  +EA + +G T   L+  LE RLDTI++R  F PTI AARQ
Sbjct: 59  KQKLRFNYG-ISERQLMSYVREARKRKGSTGEILLQILEMRLDTIIFRLGFAPTIAAARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            +NH H++VNGR V+I S  CK  D I V   S+     L  S     D P Y+ VN + 
Sbjct: 118 LINHGHIVVNGRRVDIPSSLCKVNDSISVALNSQNFVKNLLQSFTKTLDAP-YLEVNQEK 176

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A               + +   LVVEFYSR
Sbjct: 177 LSAVVRDNIPR---EAVSLQINELLVVEFYSR 205


>gi|294337252|emb|CAQ52775.1| ribosomal protein S4 [Pseudoleskeopsis zippelii]
          Length = 202

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKAPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRC   D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCXPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|256826599|ref|YP_003150558.1| 30S ribosomal protein S4P [Cryptobacterium curtum DSM 15641]
 gi|256582742|gb|ACU93876.1| SSU ribosomal protein S4P [Cryptobacterium curtum DSM 15641]
          Length = 197

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++G +      +   ++         +R+ K S +G+QLR KQK K 
Sbjct: 1   MAVNRTPVLKRCRQLGIDPIVLGYTGKESKRQP------KRRRKESEYGMQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  F+ A    G T  NL++ LESRLD IV+R  F  T   ARQ V H H
Sbjct: 55  IYG-VQEKQFRGYFRRAKSQSGITGENLMAILESRLDNIVFRLGFARTRREARQTVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VNG  V+I SYR + GD+I V  K+K+L  +  A    ER  VP ++ V+ + +  + 
Sbjct: 114 ITVNGNRVDIPSYRVRPGDLIAVAPKAKELLVIKSALVSNERVQVPAWLEVDIEKLQGSV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P+  +     + +   L+VE YS+
Sbjct: 174 LSLPTREQ---IDLDINEQLIVELYSK 197


>gi|140083431|gb|ABO84827.1| ribosomal protein S4 [Bartramia halleriana]
          Length = 202

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D I +K + K    + +     ++  +P +++ N        
Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLENKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|63101091|gb|AAY33170.1| small ribosomal protein 4 [Platyneuron laticostatum]
          Length = 202

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R VNI SYRCK  D I +K + K  A +++    +++  +P +++ +        
Sbjct: 117 ILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDQESIGLKINELLVVEYYSR 200


>gi|50365403|ref|YP_053828.1| 30S ribosomal protein S4 [Mesoplasma florum L1]
 gi|61215527|sp|Q6F0M9|RS4_MESFL RecName: Full=30S ribosomal protein S4
 gi|50363959|gb|AAT75944.1| 30S ribosomal protein S4 [Mesoplasma florum L1]
          Length = 208

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           MS+   S  K  RR G ++    K  S    R   PG HG+ + + K S +G QL+ KQK
Sbjct: 1   MSRYTGSTFKKARRYGFSILENGKEFSKGKKRVTTPGQHGKDKARLKMSGYGAQLQEKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           +K  YG ++E++FR+ F +A +  G     N +  LESRLD IV+R  F  T  AARQ V
Sbjct: 61  VKFMYG-MTERQFRNTFAKAKKVHGGILGTNFLVLLESRLDNIVFRLGFAMTRQAARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
           NH H+LVNG+ ++I SY+ K GD IEVK+  K+   + EA Q  E  V E++ V+  N+ 
Sbjct: 120 NHGHILVNGKKLDIPSYQVKPGDSIEVKEAMKKNDKIAEALQNNESTV-EFVKVDKANLK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             FVR+P   +     + +   L+VE+Y+R
Sbjct: 179 GQFVRLPERQE---LNLEINDALIVEWYNR 205


>gi|28202174|ref|NP_777415.1| ribosomal protein S4 [Anthoceros formosae]
 gi|41688603|sp|Q85AX4|RR4_ANTFO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|27807876|dbj|BAC55351.1| ribosomal protein S4 [Anthoceros formosae]
 gi|27807997|dbj|BAC55444.1| ribosomal protein S4 [Anthoceros formosae]
          Length = 202

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P +  SY   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTSKTPESKPSY---INQSTSSRKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           VLVN  +V+I S+RCK  DVI ++ + K    +  +    E+  +P +++ N    +   
Sbjct: 117 VLVNDCTVDIPSFRCKPQDVITIRDRQKSQNLMKRSRDSYEKYGIPNHLTFNSVQNIGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                        + +   LVVE+YSR
Sbjct: 177 NETIDRD---WIGLKINELLVVEYYSR 200


>gi|317046175|ref|YP_004072464.1| ribosomal protein S4 [Corynocarpus laevigata]
 gi|309252892|gb|ADO60312.1| ribosomal protein S4 [Corynocarpus laevigata]
          Length = 201

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RTGSDLKNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTISQARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K + +  A +      +   ++P+ ++++        
Sbjct: 116 ILVNGCIVDIPSYRCKPRDIITAKDEQRSRALIQNYLDSSPHEELPKDLTLHPVQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---SVGLKINELLVVEYYSR 199


>gi|228016028|gb|ACP50867.1| ribosomal protein S4 [Pinus resinosa]
          Length = 201

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|222103506|gb|ACM44282.1| small ribosomal protein subunit 4 [Marsupella commutata]
          Length = 199

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ V
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N  +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  + 
Sbjct: 117 NNDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 VNR---EWVNLKINELLVVEYYSR 197


>gi|48527353|gb|AAT45809.1| small ribosomal protein 4 [Plagiochila arbuscula]
          Length = 202

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIIIIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRVSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---ELIDLKINELLVVEYYSR 200


>gi|229815744|ref|ZP_04446069.1| hypothetical protein COLINT_02793 [Collinsella intestinalis DSM
           13280]
 gi|229808660|gb|EEP44437.1| hypothetical protein COLINT_02793 [Collinsella intestinalis DSM
           13280]
          Length = 198

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++G +      S          +   +R+ K S +G+QLR KQK+K 
Sbjct: 1   MAIDRTPVLKRCRQLGIDPVELGYSSKKE-----SIRQPKRRRKESEYGMQLREKQKVKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   ++ A R  G T  NL++ LE+RLD +V+R  F  T   ARQ V H H
Sbjct: 56  IYGVL-EKQFHHYYEHALRMDGVTGENLMTILETRLDNVVFRLGFARTRKEARQTVRHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I SYR K GDVI V +K + L  + EA   +ER +VP ++ V+ + +    
Sbjct: 115 FTVNGKRVDIPSYRVKAGDVIAVGEKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGNV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +PS  +       +   L+VE YS+
Sbjct: 175 ISLPSRDQ---ISGDINEQLIVELYSK 198


>gi|190570680|ref|YP_001975038.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019072|ref|ZP_03334879.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|226695099|sp|B3CP11|RS4_WOLPP RecName: Full=30S ribosomal protein S4
 gi|190356952|emb|CAQ54338.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995181|gb|EEB55822.1| ribosomal protein S4 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 204

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 89/206 (43%), Positives = 131/206 (63%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   + K++I RR+G NLWGR K  VN R Y PG HG     K S FG Q  A +K K 
Sbjct: 1   MTTVINRKYRISRRLGVNLWGRAKDSVNKRKYPPGQHGILGFKKLSDFGKQFAAHKKFKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY  IS K+ R  F +A + +G T+ N I  LESRL +++Y + FVPTI++A+Q ++H+H
Sbjct: 61  YYA-ISSKQLRRTFLDAYKRKGYTADNFIGALESRLSSVLYHSGFVPTIYSAKQLISHKH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VN + VNI SYR K GD++++++++ ++  ++EA Q  ER  P+Y+  +   +   ++
Sbjct: 120 VTVNDKVVNISSYRVKPGDIVKIRERAAKIPILIEAEQKQERKAPDYLEADSKALSVKYL 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P    +VPY   M+ NLVVEFYSR
Sbjct: 180 RAPQ-YSEVPYSADMEVNLVVEFYSR 204


>gi|115604936|ref|YP_784388.1| ribosomal protein S4 [Drimys granadensis]
 gi|122164439|sp|Q06GZ5|RR4_DRIGR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|112032664|gb|ABH88299.1| ribosomal protein S4 [Drimys granadensis]
          Length = 201

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + +  A +      +   ++ +++S+         
Sbjct: 116 ILVNGRIVDIPSYRCKPQDIITTRDEQRSRALIQNYMDSSPHEELAKHLSLYSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NQIIDIK---WIGLKINELLVVEYYSR 199


>gi|41323131|gb|AAR99795.1| small ribosomal protein 4 [Plagiochila semidecurrens]
          Length = 202

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNH H
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +   L V++YSR
Sbjct: 177 NQMIDR---EWINLKINELLGVKYYSR 200


>gi|20531077|gb|AAM27360.1| ribosomal protein 4 [Diphyscium foliosum]
          Length = 201

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVRIIRRLGALPGLTSKTPQLKSNS---INQSASNKKISQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           LVN R VNI SYRCK  D I +K++ K    +++   L+++  +P +++ N         
Sbjct: 117 LVNDRIVNIPSYRCKPQDFITIKERQKSQGIIVKNMDLSQKYKIPNHLTFNSLEKKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I   L      + +   LVVE+YSR
Sbjct: 177 QI---LDRESIGLKINELLVVEYYSR 199


>gi|26399190|sp|Q9M4C1|RR4_MONFO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|8017421|emb|CAB92137.1| small ribosomal protein 4 [Monoclea forsteri]
          Length = 202

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTTKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     T+  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMALTVPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N   V+I SY CK  DVI +K + K  + + +     ++  VP ++S +   +    
Sbjct: 117 ILINNSMVDIPSYNCKPKDVITIKDRPKSQSIITKNLNSFQKSKVPNHLSFDLMQVKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +   LVVE+YSR
Sbjct: 177 NQMIDR---EWILLKINELLVVEYYSR 200


>gi|86438900|emb|CAJ55425.1| small ribosomal protein 4 [Plagiochila korthalsiana]
          Length = 198

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 IAINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            ++ +        + +   LVVE+Y
Sbjct: 177 SQMINR---EWINLKINELLVVEYY 198


>gi|62079663|gb|AAX61177.1| small ribosomal protein 4 [Makinoa crispata]
          Length = 196

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K P +      G   Q    K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTNKIPKSK----SGFTNQASNKKLSQYRIRLEEKQKLRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++       A R++G T   L+  LE RLD I++R    PTI +ARQ VNHRH+LVN 
Sbjct: 56  TERQLLKYVCIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPSARQLVNHRHILVNN 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+  +VI ++   K  + +++   L++R  VP ++  +      +  ++  
Sbjct: 116 YPVDIPSYNCEPENVISIRDPKKSRSIIIKNIDLSQRAKVPNHLIFDSTQFRGSVNQMID 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   L+VE+YSR
Sbjct: 176 RD---WINLKINELLIVEYYSR 194


>gi|6002081|emb|CAA58950.1| ribosomal protein S4 [Tradescantia pallida]
          Length = 196

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +       L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNH+H
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHKH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +  +  L+   ++P++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSISLSPHEELPKHLTFDSFQHKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +   S       + +   LVVE+
Sbjct: 176 NQTIDSK---WIGLKINELLVVEY 196


>gi|94502225|ref|ZP_01308711.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833841|ref|YP_001598037.1| 30S ribosomal subunit protein S4 [Candidatus Sulcia muelleri GWSS]
 gi|172048400|sp|A8Z690|RS4_SULMW RecName: Full=30S ribosomal protein S4
 gi|94451196|gb|EAT14135.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206331|gb|ABS30641.1| 30S ribosomal subunit protein S4 [Candidatus Sulcia muelleri GWSS]
          Length = 195

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K KI R+ GE ++G+       + Y PG +   R  K +++  QL  KQK+K 
Sbjct: 1   MARYIGPKTKISRKFGELIYGKTNKSFEKKKYPPG-NSSSRNIKKTFYSTQLLEKQKIKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I E++F  +F +A + +G     L+   ESRLD IVYR     +   ARQ V+HRH
Sbjct: 60  TYG-ILERQFLKMFYKASKKKGIKGEILLQLCESRLDNIVYRLNLSHSRPEARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI S+  K GD I +K+K K  A+  +          +++S +++ M+  F 
Sbjct: 119 ITVNGKIVNIPSFNLKPGDKISLKEKHKHKANKNKLLGS------DWLSWDNEKMIGIFK 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IP+  +       +   L+VE YS+
Sbjct: 173 YIPNRNQ---ITENINEKLIVELYSK 195


>gi|108796928|ref|YP_636228.1| ribosomal protein S4 [Pseudendoclonium akinetum]
 gi|90101666|sp|Q3ZJ39|RR4_PSEAK RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|56159626|gb|AAV80650.1| ribosomal protein S4 [Pseudendoclonium akinetum]
          Length = 205

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 10/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY---FGLQLRAKQK 57
           MSK    + ++ R++G+      K  ++ ++  PG HGQ +         +GL+L  KQK
Sbjct: 1   MSKYRGPRLRLVRKLGKLPGLTSK--ISKKTNTPGEHGQPQNKLLKNRSPYGLRLLEKQK 58

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           ++  Y +I+E++     K+A    G T   L++ LE RLD IVYR    PTI AARQ V+
Sbjct: 59  LRFNY-NITERQLLRYVKQAKNLTGSTGEILLAILEMRLDNIVYRLGMAPTIVAARQLVS 117

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMV 176
           H H+LVN + VNI SY C+  +VI VK K      V +   + A   VP ++S N +N+V
Sbjct: 118 HGHILVNKQKVNIPSYPCQLKEVISVKDKKASRDLVKKFVQESAVNPVPSHLSFNKENLV 177

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LV+E+YSR
Sbjct: 178 GIVNNVATR---EWIGLQINELLVIEYYSR 204


>gi|294337152|emb|CAQ52726.1| ribosomal protein S4 [Homalia lusitanica]
          Length = 202

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLPNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|46811014|gb|AAT01825.1| small ribosomal protein 4 [Herbertus alpinus]
          Length = 197

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGTLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +     +  +
Sbjct: 117 DIVDIPSYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGFINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|328541148|gb|AEB21798.1| ribosomal protein S4 [Lepidozia laevifolia]
          Length = 199

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     +Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTLKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I +K K K  + + +   L +   +P +++ +   +  +  +I
Sbjct: 117 NNNIVDIPSYNCEPGDIITIKDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|294337194|emb|CAQ52747.1| ribosomal protein S4 [Leptopterigynandrum sp. Koponen 46079]
          Length = 202

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIDLKINELLVVEYYSR 200


>gi|328541104|gb|AEB21776.1| ribosomal protein S4 [Chloranthelia denticulata]
          Length = 199

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     S+           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +
Sbjct: 58  -LTERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIELCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|118625973|emb|CAL39308.1| small ribosomal protein 4 [Gongylanthus scariosus]
          Length = 202

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+G       K+      Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKVIRRLGVLPGLTNKTLKPKSGY---IDRSISNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A  ++G T   L+  LE R D  ++R    PTI  ARQ VNH H
Sbjct: 58  HYG-LTERQLLKYVRIAREAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I VK K K  + + +   L      P +++++   +  + 
Sbjct: 117 ISINNSIVDIPSYNCEPGDIITVKDKRKSRSVITKNINLFRNLRTPSHLTLDSTELRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 DQTINR---EWIDLKINELLVVEYYSR 200


>gi|294337084|emb|CAQ52692.1| ribosomal protein S4 [Bryolawtonia vancouveriensis]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|290790782|gb|ADD63039.1| ribosomal protein S4 [Potamophila parviflora]
          Length = 201

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P +  +     H      K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTPKSRSNLKKKFH----SGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199


>gi|328541096|gb|AEB21772.1| ribosomal protein S4 [Mastigobryum limbatum]
          Length = 199

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +
Sbjct: 58  -LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWVNLKINELLVVEYYSR 197


>gi|63191663|gb|AAY34793.1| small ribosomal protein subunit 4 [Dixonia thamnioides]
 gi|294337132|emb|CAQ52716.1| ribosomal protein S4 [Haplohymenium pseudotriste]
 gi|294337182|emb|CAQ52741.1| ribosomal protein S4 [Hypnum cupressiforme]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|194033151|ref|YP_002000489.1| ribosomal protein S4 [Brachypodium distachyon]
 gi|193075559|gb|ACF08642.1| ribosomal protein S4 [Brachypodium distachyon]
          Length = 201

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +  + V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSQSLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199


>gi|11467819|ref|NP_050870.1| ribosomal protein S4 [Nephroselmis olivacea]
 gi|26399202|sp|Q9TKX5|RR4_NEPOL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|5880748|gb|AAD54841.1|AF137379_64 ribosomal protein S4 [Nephroselmis olivacea]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+GE      K  +  R   PG HG   K KPS + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIVRRLGELPGLTRK--MAKRKSPPGQHGAASK-KPSQYRIRLEEKQKLRY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     + A R++G +  NL+  LE RLDT ++R    PT+ +ARQ + H H
Sbjct: 58  NYG-VTEKQLLRYMQRARRAKGSSGENLLQLLEMRLDTTIFRLGMAPTMLSARQLITHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATF 179
           +LV+ + VNI SY+C   + I ++  S+    +          V P ++ +  + +    
Sbjct: 117 ILVSEQRVNIPSYQCSPKEKISIRSNSRSRKLIEGYMSTMGSIVTPPHLELKKEKLEGNI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205
             I          + +   LVVE+YS
Sbjct: 177 QEIIDRQ---WVGLPINELLVVEYYS 199


>gi|290487064|gb|ADD29916.1| ribosomal protein S4 [Dillenia indica]
          Length = 201

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P         L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D++ VK + K  A +      +   ++P++++++        
Sbjct: 116 ILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---CVGLKINELLVVEYYSR 199


>gi|294337230|emb|CAQ52764.1| ribosomal protein S4 [Orthostichella rigida]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNGCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|83416498|gb|ABC18269.1| small ribosomal subunit protein 4 [Amphidium mougeotii]
          Length = 200

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +
Sbjct: 117 VNDRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNVDFSQKSKVPNHLTFNSLEKKGLVNK 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDQESIGLKINELLVVEYYSR 198


>gi|294337228|emb|CAQ52763.1| ribosomal protein S4 [Pendulothecium punctatum]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|157325532|ref|YP_001468310.1| ribosomal protein S4 [Ipomoea purpurea]
 gi|171769950|sp|A7Y3D8|RR4_IPOPU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|157056760|gb|ABV02350.1| ribosomal protein S4 [Ipomoea purpurea]
          Length = 203

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P         L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRP----RAESDLRNQSRSGKKSQYCIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTERQLIQYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD-NMVAT 178
           +LVNGR V+I SYRCK  D+I  K   K  A +  + + +   ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITSKDNQKSRALIQNSLESSPHEELPNHLALDPSPYYKGL 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  +       + +   LV+E+YSR
Sbjct: 176 VNQIIDTK---WVGLKINEFLVIEYYSR 200


>gi|328541162|gb|AEB21805.1| ribosomal protein S4 [Lepidozia trichodes]
          Length = 200

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSTKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|222103444|gb|ACM44251.1| small ribosomal protein subunit 4 [Haplocladium microphyllum]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337244|emb|CAQ52771.1| ribosomal protein S4 [Porotrichum frahmii]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCXVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|210631179|ref|ZP_03296790.1| hypothetical protein COLSTE_00675 [Collinsella stercoris DSM 13279]
 gi|210160146|gb|EEA91117.1| hypothetical protein COLSTE_00675 [Collinsella stercoris DSM 13279]
          Length = 198

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++G +      S          +   +R+ K S +G+QLR KQK+K 
Sbjct: 1   MAIDRTPVLKRCRQLGIDPVELGYSSKKE-----SIRQPKRRRKESEYGMQLREKQKVKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   ++ A R  G T  NL++ LE+RLD +V+R  F  T   ARQ V H H
Sbjct: 56  IYGVL-EKQFHHYYEHALRMDGVTGENLMTILETRLDNVVFRLGFARTRKEARQSVRHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I SYR K GDV+ V +K + L  + EA   +ER +VP ++ V+ + +    
Sbjct: 115 FTVNGKRVDIPSYRVKAGDVVAVGEKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGNV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +PS  +       +   L+VE YS+
Sbjct: 175 ISLPSREQ---ISGDINEQLIVELYSK 198


>gi|26399180|sp|Q9FT08|RR4_BUCRO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|10798455|emb|CAC12803.1| small ribosomal protein 4 [Bucegia romanica]
          Length = 202

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P     Y    +      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A  ++G T    +   E RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLKYVRIARGAKGSTGQISLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   VNI SYRCK  D I +K   K    + +  +L+++  +P +++ N        
Sbjct: 117 ILVNNNIVNIPSYRCKPQDFITIKNSQKSQTIITKNIELSQKYQIPNHLTFNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541102|gb|AEB21775.1| ribosomal protein S4 [Mastigobryum lenormandii]
          Length = 199

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +
Sbjct: 58  -LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAM 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|6002069|emb|CAA58942.1| ribosomal protein S4 [Nelumbo nucifera]
          Length = 196

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----KAGSDFRNQARSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVCIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196


>gi|294337126|emb|CAQ52713.1| ribosomal protein S4 [Gollania ruginosa]
          Length = 202

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|228015961|gb|ACP50801.1| ribosomal protein S4 [Pinus ponderosa]
 gi|228016414|gb|ACP51247.1| ribosomal protein S4 [Pinus thunbergii]
 gi|228016480|gb|ACP51312.1| ribosomal protein S4 [Pinus torreyana subsp. insularis]
 gi|228017479|gb|ACP52295.1| ribosomal protein S4 [Pinus merkusii]
 gi|228017735|gb|ACP52547.1| ribosomal protein S4 [Pinus pinaster]
 gi|270485094|gb|ACP51372.2| ribosomal protein S4 [Pinus torreyana subsp. torreyana]
          Length = 201

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|118625991|emb|CAL39317.1| small ribosomal protein 4 [Gongylanthus reniformis]
          Length = 202

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+      Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGVLPGSTNKTLKPKSGY---IDRSISNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A  ++G T   L+   E R D  ++R    PTI  ARQ VNH H
Sbjct: 58  HYG-LTERQLLKYVRIAREAKGSTGQVLLQLPEMRSDNTIFRLGMAPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I VK K K  + + +   L +    P +++++   +  + 
Sbjct: 117 ISINNSIVDIPSYNCEPGDIITVKDKRKSRSVITKNINLFKNLRTPSHLTLDSTELRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +        + +   LVVE+YSR
Sbjct: 177 DQTINR---EWIDLKVNELLVVEYYSR 200


>gi|182420375|ref|ZP_02951597.1| ribosomal protein S4 [Clostridium butyricum 5521]
 gi|237668617|ref|ZP_04528601.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182375741|gb|EDT73339.1| ribosomal protein S4 [Clostridium butyricum 5521]
 gi|237656965|gb|EEP54521.1| ribosomal protein S4 [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 199

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N+ G PK+         G    R   K S +G QL  KQ+++ 
Sbjct: 1   MAKMMGPRFKLCRRLGLNVNGHPKAMKRA-----GNGSARDSKKLSPYGTQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F +  ++A + +  T + LI  LE RLD IV+R  F  ++  ARQ V H H
Sbjct: 56  YYG-VMEKQFATYARKAFKDKDQTGYALIKRLECRLDNIVFRLGFASSLAQARQMVVHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  VNI S+    GDV+ +++KS++     +       +V  Y++ N      + +
Sbjct: 115 ILVNGEKVNIPSFNVNIGDVVALREKSQKNEMFRDNFLSNILNVYPYLTKNEAEFSGSLL 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P+ +  +LVVE+YS+
Sbjct: 175 RYPERSE---VPIQINDSLVVEYYSK 197


>gi|548869|sp|P36461|RR4_IRIPA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439946|emb|CAA82453.1| ribosomal protein S4 [Iris pallida]
          Length = 196

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +          ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|66990676|emb|CAI29116.1| small ribosomal protein 4 [Plagiochila stricta]
          Length = 198

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 8/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            ++ +        + +   LVVE+Y
Sbjct: 177 NQMINR---EWINLKINEVLVVEYY 198


>gi|6002033|emb|CAA58924.1| ribosomal protein S4 [Butomus umbellatus]
          Length = 196

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +    V  +    +  ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKTLVQNSIASSSHEELPKHLTIDSSQHKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196


>gi|6002049|emb|CAA58934.1| ribosomal protein S4 [Elettaria cardamomum]
          Length = 196

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGIASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K K +  A +  +  L+   ++P++++ +        
Sbjct: 116 ILVNGGIVDIPSYRCKPRDIITTKDKQRSKALIKNSISLSPHEELPKHLTFDSFQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIVDSK---WIGLKINELLVVEY 196


>gi|3914842|sp|O47026|RR4_ASPSB RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2808628|emb|CAA58922.1| ribosomal protein S4 [Asparagus maritimus]
          Length = 196

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L    R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNPLRSVKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +  +       ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQTSIASSPHEELPNHLTIDSFQYKGLI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|294337068|emb|CAQ52684.1| ribosomal protein S4 [Andoa berthelotiana]
          Length = 202

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|67035738|gb|AAY62800.1| small ribosomal protein subunit 4 [Distichium capillaceum]
          Length = 199

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++  + +++  VP +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNIEFSQKYKVPNHLTFNSLQKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|290487082|gb|ADD29925.1| ribosomal protein S4 [Ximenia americana]
          Length = 201

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P         L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRPRAR----SDLRNQSRSGKRSQYRIRLEEKQKLRL 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++F    +   +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQFLKYVRITGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K  A +      +  +++P+++++         
Sbjct: 116 ILVNGRVVDIPSYRCKPRDIITARDEQKSKALIQNYLDSSPHKELPKHLALRAFQYKGFV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LV+E+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVIEYYSR 199


>gi|5911470|emb|CAA58930.1| ribosomal protein S4 [Delphinium staphisagria]
          Length = 196

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    + G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTSKRP----TPGSDLRNQSRFGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + K    +      +   ++P++++++      + 
Sbjct: 116 ILVNGRIVDIPSYRCKARDIITTRDEQKSKVLIQNYLDSSPHEELPKHLTLHASQYKGSV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196


>gi|290790713|gb|ADD62971.1| ribosomal protein S4 [Oryza australiensis]
          Length = 201

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 IFVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199


>gi|62288923|sp|P69629|RR4_AGABR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288953|sp|P69679|RR4_YUCFI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2808626|emb|CAA58916.1| ribosomal protein S4 [Agave bracteosa]
 gi|2808632|emb|CAA58955.1| ribosomal protein S4 [Yucca filamentosa]
          Length = 196

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L    R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----RSGSDLKNPLRSVKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +          ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|294337226|emb|CAQ52762.1| ribosomal protein S4 [Papillaria crocea]
          Length = 202

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 TQI---LDRESIGLKINELLVVEYYSR 200


>gi|110456648|gb|ABG74767.1| ribosomal protein S4 [Jasminum leratii]
          Length = 203

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +    + K  RR+G       KSP      G  L  + R  K S + ++L  KQK+  
Sbjct: 1   MPRYLGPRFKKIRRLGALPGLTNKSP----KAGSDLRKKPRSRKKSQYRIRLEEKQKLCF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG + + +     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LRDYQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+  SYRCK  D+I  K   K    +  +   +  +++P +++++        
Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|26399120|sp|P59150|RR4_TAKLE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504727|emb|CAC80628.1| small ribosomal protein 4 [Takakia lepidozioides]
          Length = 202

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR G +     K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRPGVSPGLTSKTLKSKSNY---IDRSTSNKKVSQYRVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   ++I SY  + GD+I ++ K +  + + +   L ++  +P ++S +   +  + 
Sbjct: 117 ISMNNNIIDIPSYNREPGDIITIRNKLESRSMISKNINLFQKLKMPSHLSFDLTGLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMVNR---EWVNLKINELLVVEYYSR 200


>gi|307697313|gb|ADN86111.1| ribosomal protein S4 [Chasmanthium latifolium]
          Length = 201

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGTLPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 QKILDRK---WVGLKINELLVVEYYSR 199


>gi|294337088|emb|CAQ52694.1| ribosomal protein S4 [Straminergon stramineum]
          Length = 202

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    L+      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|237654187|ref|YP_002890501.1| 30S ribosomal protein S4 [Thauera sp. MZ1T]
 gi|237625434|gb|ACR02124.1| ribosomal protein S4 [Thauera sp. MZ1T]
          Length = 203

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 5/204 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ R +G  L G  + P+  R++ PG HG RR  + S FG+QL  KQK++ 
Sbjct: 1   MSRYTGPRLKVMRALGAELPGLSRKPLGERNHPPGQHG-RRPRRKSGFGVQLIEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+ + +F+EA R RG T   L+  LE RLD  V+RA F PT  AARQ V H+H
Sbjct: 60  NYG-LGEKQIQRLFREAKRDRGPTGDKLLELLERRLDNFVFRAGFAPTAVAARQLVRHKH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VL+NGR+VNI S R + GD I++ ++++ +  V+EA        PE++  +    VAT  
Sbjct: 119 VLLNGRAVNIPSIRIRPGDRIQLTERARCIPVVVEALAEPALTRPEWLVFDEAAFVATMT 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFY 204
           R PS   +VP+PV +    VVE+Y
Sbjct: 179 RTPS-PDEVPFPVDV--QQVVEYY 199


>gi|294337150|emb|CAQ52725.1| ribosomal protein S4 [Homalia glabella]
          Length = 202

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +        
Sbjct: 117 ILVNDCMVDIPSYRCKPQDFITIKDQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQILDRG---SIGLKINELLVVEYYSR 200


>gi|282883330|ref|ZP_06291924.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B]
 gi|300813858|ref|ZP_07094163.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|281296834|gb|EFA89336.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B]
 gi|300512045|gb|EFK39240.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 198

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59
           M+K    + K+ RR+G N+ G PK+            G  R  K  + +G QL  KQ+++
Sbjct: 1   MAKMMGPRFKLSRRLGLNVCGHPKAMKRA------QRGSARSDKKLTEYGKQLLEKQRLR 54

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG + EK+F+++F EA +++G T  NL+SFLE RLD + YR  F  +I  ARQ V H 
Sbjct: 55  AYYG-LLEKQFKNLFIEAQKAKGQTGPNLVSFLERRLDNLCYRLGFASSIRQARQMVLHG 113

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LVNG+ V+I SYRC   D I + +K K++    E           Y+S N D      
Sbjct: 114 HILVNGKKVDIPSYRCDVSDEISLSRKGKKVELFKENFNTNFPVSYPYLSKNED-FKGKL 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V +P+       P+ ++  L+VE+YS+
Sbjct: 173 VSLPNR---EDIPIEIEDQLIVEYYSK 196


>gi|6002019|emb|CAA58915.1| ribosomal protein S4 [Aechmea dealbata]
          Length = 196

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYEHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K        +       A +++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDNQGSKGLIQNYIASSAHKELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|6002047|emb|CAA58933.1| ribosomal protein S4 [Eichhornia crassipes]
          Length = 196

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P         L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSVSDLKNQLRSGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPPARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K    A +  +    ++ ++P +++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITAKDKQGSKALIQNSIAVSSQEELPFHLTFDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|67035566|gb|AAY62714.1| small ribosomal protein subunit 4 [Symblepharis lindigii]
          Length = 199

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I
Sbjct: 117 NDHIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|63145902|gb|AAY33889.1| small ribosomal protein 4 [Jensenia decipiens]
          Length = 202

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G  L G     + +RS            K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRAKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +L+N   VNI SY CK  DVI +K + +  + + +   L  E+ +P +++ +      + 
Sbjct: 117 ILINDDIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWISLKINELLVVEYYSR 200


>gi|294337130|emb|CAQ52715.1| ribosomal protein S4 [Haplohymenium longinerve]
          Length = 202

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  +   +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQXXKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|299830416|ref|YP_003734631.1| ribosomal protein S4 [Kryptoperidinium foliaceum]
 gi|297385118|gb|ADI40416.1| ribosomal protein S4 [Kryptoperidinium foliaceum]
          Length = 204

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K KI RR+G       K        G   +      K + +G++L  KQK+K 
Sbjct: 1   MSRYRGPKLKISRRLGTLPGLTTKKSKKLNRPGKDGNSPDMNKKLTEYGIRLEEKQKLKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SE +     KEA R +G T   L+  LE RLDT+ +   F  +I  ARQ VNH H
Sbjct: 61  NYG-LSESQLFRYVKEARRRKGVTGLILLQLLEMRLDTLCFNLGFASSIAQARQLVNHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN + +NI S++C+  D+I VK+KS     V    +  +R D+P  +  + +++ AT 
Sbjct: 120 ITVNNKVINIPSFQCRLKDIISVKEKSTSKNLVTTNLKNNQRNDLPSNLKFDANSLTATV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   +       P+ +   LV+E YSR
Sbjct: 180 LDYCNR---EDIPLQLDELLVIEHYSR 203


>gi|48527381|gb|AAT45823.1| small ribosomal protein 4 [Plagiochila heterophylla]
          Length = 200

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +       +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLESNY-----IDRSTSNKKVSQYRIRLEEKQKLRF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 56  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P ++  +   +  + 
Sbjct: 115 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 175 NQMINR---EWINLKINELLVVEYYSR 198


>gi|6002087|emb|CAA58953.1| ribosomal protein S4 [Tradescantia virginiana]
          Length = 196

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +       L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKKPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNH+H
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHKH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +  +  L+   ++P++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSISLSPHEELPKHLTFDSFQHKGFV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +   S       + +   LVVE+
Sbjct: 176 NQTIDSK---WIGLKINELLVVEY 196


>gi|294337118|emb|CAQ52709.1| ribosomal protein S4 [Giraldiella levieri]
          Length = 202

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A + +G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|26399102|sp|P59141|RR4_HYPAR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504365|emb|CAC81026.1| small ribosomal protein 4 [Hypopterygium arbuscula]
          Length = 202

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDYVVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|67035574|gb|AAY62718.1| small ribosomal protein subunit 4 [Oreoweisia laxifolia]
          Length = 199

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|6002039|emb|CAA58927.1| ribosomal protein S4 [Costus lucanusianus]
          Length = 196

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTSKRP----RSGSDLKNQLHSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +     L    ++P++++ +        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIALCPHEELPKHLTFDSFQYKGVV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|11466789|ref|NP_039385.1| ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|50233973|ref|YP_052751.1| ribosomal protein S4 [Oryza nivara]
 gi|109156597|ref|YP_654216.1| ribosomal protein S4 [Oryza sativa Indica Group]
 gi|62287252|sp|Q6ENH2|RR4_ORYNI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|148840862|sp|P0C486|RR4_ORYSA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|148840865|sp|P0C487|RR4_ORYSI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|148840866|sp|P0C488|RR4_ORYSJ RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|20146759|gb|AAM12495.1|AC074232_22 ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|11986|emb|CAA33998.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|42795489|gb|AAS46056.1| ribosomal protein S4 [Oryza sativa Indica Group]
 gi|42795556|gb|AAS46122.1| ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|42795620|gb|AAS46185.1| ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|49614997|dbj|BAD26780.1| ribosomal protein S4 [Oryza nivara]
 gi|290790575|gb|ADD62835.1| ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|290790644|gb|ADD62903.1| ribosomal protein S4 [Oryza meridionalis]
 gi|226607|prf||1603356AD ribosomal protein S4
          Length = 201

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199


>gi|294337070|emb|CAQ52685.1| ribosomal protein S4 [Anomodon giraldii]
          Length = 202

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541122|gb|AEB21785.1| ribosomal protein S4 [Acromastigum cunninghamii]
          Length = 198

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K+ RR+G       K+  +  S+           K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKVIRRLGALPGLTGKTLKSKSSH---NDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+ +N
Sbjct: 57  LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  
Sbjct: 117 NNIVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSIDQTI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWINLKINELLVVEYYSR 196


>gi|77862539|gb|ABB04542.1| small ribosomal protein 4 [Marchantia paleacea]
          Length = 201

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+      Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKLKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N  +V+I SY CK  DVI +K +SK  + +++     ++  +P +++ +   +     
Sbjct: 117 LINNNTVDIPSYNCKPKDVITIKDRSKSQSIIIKNLNSFQKQKIPNHLTFDLMQIKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|139438877|ref|ZP_01772337.1| Hypothetical protein COLAER_01341 [Collinsella aerofaciens ATCC
           25986]
 gi|133775588|gb|EBA39408.1| Hypothetical protein COLAER_01341 [Collinsella aerofaciens ATCC
           25986]
          Length = 198

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++G +      S          +   +R+ K S +G+QLR KQK+K 
Sbjct: 1   MAIDRTPVLKRCRQLGIDPAELGYSSKKE-----SIRQPKRRRKESEYGMQLREKQKVKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   F +A +  G T  NL+  LESRLD +V+R  F  T   ARQ V H H
Sbjct: 56  IYGVL-EKQFHGYFNKARKMNGVTGENLMIILESRLDNVVFRLGFARTRKEARQSVRHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I SYR K GDV+ V +K + L  + EA   +ER +VP ++ V+ + +    
Sbjct: 115 FTVNGKRVDIPSYRVKAGDVVAVGEKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGNV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +P+  +       +   L+VE YS+
Sbjct: 175 LALPTREQ---ISGDINEQLIVELYSK 198


>gi|295136984|ref|YP_003587530.1| ribosomal protein S4 [Pisum sativum]
 gi|293338556|gb|ADE43529.1| ribosomal protein S4 [Pisum sativum]
          Length = 197

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 13/207 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G             R   P    Q R SK S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLT-------RKELPVGSEQSRSSKKSQYRIRLEEKQKLRF 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 54  HYG-LTERQLLKYVRIAGKAKGSTGEVLLQLLEMRLDNILFRLGMAATIPQARQLVNHRH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNGR V+I SYRCK  D+I  K   K    +  + + A R  +P ++ +         
Sbjct: 113 VLVNGRIVDIPSYRCKPEDIITAKDDKKSRTLIQNSLESAPRKQLPTHLIL-PFQYKGLV 171

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 172 KQIIDSK---WVGLEINELLVVEYYSR 195


>gi|59803303|gb|AAX07760.1| Rps4 [Lunularia cruciata]
          Length = 202

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSXYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  A Q VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLXLLEMRLDNIIFRLGMAPTIPGAGQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +L+N  +V+I  Y CK  DVI +K + K  + + +      ++ +P ++S +        
Sbjct: 117 ILINDNTVDIPXYNCKPKDVITIKNRQKSQSIITKNLTSFQKQKIPNHLSFDLIQFQGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWIYLKINELLVVEYYSR 200


>gi|294337275|emb|CAQ52786.1| ribosomal protein S4 [Thamnobryum maderense]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNH H
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|140083433|gb|ABO84828.1| ribosomal protein S4 [Anacolia webbii]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G        +P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNXTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N        
Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|41323121|gb|AAR99790.1| small ribosomal protein 4 [Plagiochila orbicularis]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI  R+G       K+  +   Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIPRLGAFPGLTGKTLKSKSRY---INRATPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIAKKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINELLVVEYYSR 200


>gi|118430390|ref|YP_874655.1| ribosomal protein S4 [Hordeum vulgare subsp. vulgare]
 gi|152060552|sp|A1E9J3|RR4_HORVU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|118201044|gb|ABK79415.1| ribosomal protein S4 [Hordeum vulgare subsp. vulgare]
          Length = 201

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P +++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPSHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199


>gi|26399112|sp|P59146|RR4_LEUSC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504367|emb|CAC80644.1| small ribosomal protein 4 [Leucodon sciuroides]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   VNI SYRCK  D I +K + K  A + +  +  +   +P +++ +        
Sbjct: 117 ILVNDCIVNIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQNSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|11467194|ref|NP_043027.1| ribosomal protein S4 [Zea mays]
 gi|48478773|ref|YP_024381.1| ribosomal protein S4 [Saccharum hybrid cultivar SP-80-3280]
 gi|50812530|ref|YP_054633.1| ribosomal protein S4 [Saccharum officinarum]
 gi|118614494|ref|YP_899409.1| ribosomal protein S4 [Sorghum bicolor]
 gi|133955|sp|P02355|RR4_MAIZE RecName: Full=30S ribosomal protein S4, chloroplastic; AltName:
           Full=Basic protein
 gi|52783337|sp|Q6L397|RR4_SACHY RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62287254|sp|Q6ENW1|RR4_SACOF RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|125987753|sp|A1E9S6|RR4_SORBI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|12412|emb|CAA25754.1| unnamed protein product [Zea mays]
 gi|902224|emb|CAA60288.1| ribosomal protein S4 [Zea mays]
 gi|48478675|gb|AAT44695.1| ribosomal protein S4 [Saccharum hybrid cultivar SP80-3280]
 gi|49659514|dbj|BAD27295.1| ribosomal protein S4 [Saccharum hybrid cultivar NCo 310]
 gi|118201128|gb|ABK79498.1| ribosomal protein S4 [Sorghum bicolor]
          Length = 201

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V      ++   +P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199


>gi|294337096|emb|CAQ52698.1| ribosomal protein S4 [Cryphaea amurensis]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337267|emb|CAQ52782.1| ribosomal protein S4 [Taiwanobryum robustum]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D+I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|157689548|gb|ABV65330.1| ribosomal protein S4 [Quillaja saponaria]
          Length = 197

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 9/203 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 56  LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
           GR V+I SYRCK  D+I  + + K  A +      + R ++P+++++          +I 
Sbjct: 116 GRIVDIPSYRCKPQDIITARDEQKSRALIQNYLDSSPREELPKHLTLPPFQYKGLVNQII 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            S       + +   LVVE+YSR
Sbjct: 176 DSK---WVGLKINELLVVEYYSR 195


>gi|86438896|emb|CAJ55412.1| small ribosomal protein 4 [Plagiochila gigantea]
          Length = 196

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ 
Sbjct: 58  G-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHIS 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  +
Sbjct: 117 INNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFY 204
           + +        + +   LVVE+Y
Sbjct: 177 MINR---EWINLKINELLVVEYY 196


>gi|59803299|gb|AAX07758.1| Rps4 [Haplomitrium gibbsiae]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+P   +    G        K S + ++L  KQK++ 
Sbjct: 1   MSRXRGPRSKIIRRLGSLPGLTNKAP---KPRPGGTDQSIANKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNVISRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +L+N ++V+I S  C+ GD+I V+ ++     + E +  ++R   P +++++    +   
Sbjct: 117 ILLNDKTVDIPSCNCEPGDIITVRDRAGSRPVIAEGTDPSQRSRTPNHLNLDSARNMGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWISLKINELLVVEYYSR 200


>gi|237688560|ref|YP_002905178.1| ribosomal protein S4 [Pinus contorta]
 gi|226875388|gb|ACO89126.1| ribosomal protein S4 [Pinus contorta]
          Length = 201

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +        + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRXXXXXXXQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|294337100|emb|CAQ52700.1| ribosomal protein S4 [Dacryophyllum falcifolium]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +  +     
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLDKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337271|emb|CAQ52784.1| ribosomal protein S4 [Taxiphyllum aomoriense]
          Length = 202

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    SY   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGILPGLTNKTPQLKSSY---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|145408427|ref|NP_817246.2| ribosomal protein S4 [Pinus koraiensis]
 gi|324986396|ref|YP_004276268.1| ribosomal protein S4 [Pinus lambertiana]
 gi|148887422|sp|Q85WX8|RR4_PINKO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|145048679|gb|AAO74091.2| ribosomal protein S4 [Pinus koraiensis]
 gi|228016152|gb|ACP50989.1| ribosomal protein S4 [Pinus sibirica]
 gi|228016790|gb|ACP51617.1| ribosomal protein S4 [Pinus armandii]
 gi|228017160|gb|ACP51981.1| ribosomal protein S4 [Pinus cembra]
 gi|323514245|gb|ADX89792.1| ribosomal protein S4 [Pinus lambertiana]
          Length = 203

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +          RK   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 59  HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201


>gi|77862545|gb|ABB04545.1| small ribosomal protein 4 [Neohodgsonia mirabilis]
          Length = 201

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N  +V+I SY CK  DVI +K + K  + V +     ++  +P +++ +         
Sbjct: 117 LINDNTVDIPSYNCKPKDVITIKNRQKSQSIVTKNLNSFQKQKIPNHLNFDLIQFKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|228016979|gb|ACP51803.1| ribosomal protein S4 [Pinus banksiana]
          Length = 201

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRPSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|67035576|gb|AAY62719.1| small ribosomal protein subunit 4 [Eucamptodon perichaetialis]
          Length = 199

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R +NI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I
Sbjct: 117 NDRIINIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKIPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|328541114|gb|AEB21781.1| ribosomal protein S4 [Acromastigum mooreanum]
 gi|328541116|gb|AEB21782.1| ribosomal protein S4 [Acromastigum sp. 'furcatifolium']
          Length = 199

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+  +  SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTSKTLKSKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NKNIVDIPSYNCEPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDLIKLYGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   L+VE+YSR
Sbjct: 177 INR---ESIDLKINELLIVEYYSR 197


>gi|228017043|gb|ACP51866.1| ribosomal protein S4 [Pinus canariensis]
          Length = 201

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + +N   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRINDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|237688629|ref|YP_002905246.1| ribosomal protein S4 [Pinus gerardiana]
 gi|226876089|gb|ACO89345.1| ribosomal protein S4 [Pinus gerardiana]
 gi|228016279|gb|ACP51114.1| ribosomal protein S4 [Pinus strobus]
 gi|228016915|gb|ACP51740.1| ribosomal protein S4 [Pinus ayacahuite]
 gi|228017283|gb|ACP52102.1| ribosomal protein S4 [Pinus flexilis]
 gi|228017348|gb|ACP52166.1| ribosomal protein S4 [Pinus lambertiana]
 gi|228017542|gb|ACP52357.1| ribosomal protein S4 [Pinus monticola]
 gi|228017604|gb|ACP52418.1| ribosomal protein S4 [Pinus parviflora var. pentaphylla]
 gi|228017668|gb|ACP52481.1| ribosomal protein S4 [Pinus peuce]
          Length = 203

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +          RK   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 59  HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201


>gi|294337164|emb|CAQ52732.1| ribosomal protein S4 [Homaliodendron exiguum]
 gi|294337166|emb|CAQ52733.1| ribosomal protein S4 [Homaliodendron microdendron]
 gi|294337220|emb|CAQ52759.1| ribosomal protein S4 [Neckeropsis calcicola]
 gi|294337222|emb|CAQ52760.1| ribosomal protein S4 [Neckeropsis calcutensis]
          Length = 202

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|308177512|ref|YP_003916918.1| 30S ribosomal protein S20 [Arthrobacter arilaitensis Re117]
 gi|307744975|emb|CBT75947.1| 30S ribosomal protein S20 [Arthrobacter arilaitensis Re117]
          Length = 207

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 11/209 (5%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++R     ++ R +G  L  + +  +  R YGPG HG+ RK + S + ++LR KQ+++  
Sbjct: 6   ARRT---VRLSRALGLALTPKAEKYMERRPYGPGQHGRARKKQDSDYAVRLREKQRLRAQ 62

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG I E +  S FKEA R  G+T  NL++ LESRLD +V RA F  TI  ARQ V HRH+
Sbjct: 63  YG-IREAQMLSAFKEAKRLGGETGGNLLALLESRLDALVLRAGFARTIQQARQMVVHRHI 121

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVA 177
           LVNG+ V+  S++ + G +I V +KS+++     A+      V    P Y+ V  + + A
Sbjct: 122 LVNGQRVDRPSFKVQPGQLIHVHEKSEKMVPFQMAAAGEHSKVLPAAPAYLDVKLEALQA 181

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           TF+R P   +    PV  + NLVVE+Y+R
Sbjct: 182 TFLRAPERAE---IPVTCEENLVVEYYAR 207


>gi|6002043|emb|CAA58931.1| ribosomal protein S4 [Dioscorea balcanica]
          Length = 196

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDFKNQSRFGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTEQQLLRYVHIAGKAKGSTDQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +  + + +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNSIESSPHEELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---FIGLKINELLVVEY 196


>gi|324986539|ref|YP_004276409.1| ribosomal protein S4 [Pinus nelsonii]
 gi|323522727|gb|ADX94975.1| ribosomal protein S4 [Pinus nelsonii]
          Length = 201

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DV+ ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVLTIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|294337254|emb|CAQ52776.1| ribosomal protein S4 [Pseudotaxiphyllum fauriei]
          Length = 202

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPKDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|197131484|gb|ACH47260.1| ribosomal protein S4 [Geranium macrorrhizum]
          Length = 199

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K   R+G       K P +     P        SK   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKICRLGALPGLTTKRPPDKSKSNP------PFSKKKEYQIRLKEKQKLRF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ +NHRH
Sbjct: 55  HYG-LTERQLLKYVRIAGKAKGPTGPVLLQLLEMRLDNTLFRLGMASTIPQARQLINHRH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  ++K K    +         + +P +++++        
Sbjct: 114 ILVNGRMVDIPSYRCKPRDIITAREKEKSRTLIQNYLDSPPHEKLPYHLTIDPLQYKGLV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + ++  LVVE+YSR
Sbjct: 174 NQIIARG---WVGLKIKELLVVEYYSR 197


>gi|6002073|emb|CAA58945.1| ribosomal protein S4 [Potamogeton crispus]
          Length = 196

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGNDPKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR VNI SYRCK  D+I  K   +  A V      + R ++P++++V+        
Sbjct: 116 ILVNGRIVNIPSYRCKPRDIITTKDNQRSKALVQNYIDSSSREELPQHLTVDSSQYKGFV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---SVGLKINELLVVEY 196


>gi|294337208|emb|CAQ52753.1| ribosomal protein S4 [Miyabea fruticella]
 gi|294337210|emb|CAQ52754.1| ribosomal protein S4 [Miyabea rotundifolia]
          Length = 202

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|26399182|sp|Q9FTC7|RR4_ANTPU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|9971065|emb|CAC07204.1| small ribosomal protein 4 [Anthoceros punctatus]
          Length = 202

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTSKLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  VP +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQPKSETMISKNIELYQKSKVPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|77862515|gb|ABB04530.1| small ribosomal protein 4 [Athalamia pinguis]
          Length = 201

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKFGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK  DVI +K + K  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNIVDIPSYNCKPKDVISIKDRPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|294337277|emb|CAQ52787.1| ribosomal protein S4 [Thamnobryum subserratum]
          Length = 202

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|317125841|ref|YP_004099953.1| 30S ribosomal protein S4P [Intrasporangium calvum DSM 43043]
 gi|315589929|gb|ADU49226.1| SSU ribosomal protein S4P [Intrasporangium calvum DSM 43043]
          Length = 202

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G  K+    R + PG HG+RR  +  Y   QL+ KQ+ + 
Sbjct: 1   MARYTGPITKKSRRLKMDLVGGDKN-FELRPFPPGQHGRRRIQEKEYL-TQLQEKQRARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   +KEA R  G T  NL+  LESRLD +VYRA    T   ARQ V H H
Sbjct: 59  AYG-VMEKQFVRYYKEAARRPGKTGENLLQILESRLDNVVYRAGLARTRRHARQLVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG  V++ SYR ++ DV+ V+++S +      A Q   +R  P ++ V   ++    
Sbjct: 118 FEVNGVRVDVPSYRVEQFDVVTVRKQSVETFPFELARQTFGDRTPPAWMHVVPGSLQILI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +       +   L+VE YS+
Sbjct: 178 HQLPVRAQ---IDSQLTEQLIVELYSK 201


>gi|294337138|emb|CAQ52719.1| ribosomal protein S4 [Heterocladium dimorphum]
          Length = 202

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E+RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPETRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIASYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L        +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGSKINELLVVEYYSR 200


>gi|26399092|sp|P59135|RR4_BRYCA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504373|emb|CAC80631.1| small ribosomal protein 4 [Rosulabryum capillare]
          Length = 202

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    +    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGVLPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N        
Sbjct: 117 ILVNDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 TQI---LDRESIGLKINELLVVEYYSR 200


>gi|228016727|gb|ACP51555.1| ribosomal protein S4 [Pinus aristata]
          Length = 201

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNMDLFQRDKLPNHLTFHPLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|294337240|emb|CAQ52769.1| ribosomal protein S4 [Porotrichodendron superbum]
          Length = 202

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +  +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKISNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541170|gb|AEB21809.1| ribosomal protein S4 [Telaranea plumulosa]
          Length = 199

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTVKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCESGDLITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSIDQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWVNLKINELLVVEYYSR 197


>gi|11466426|ref|NP_038430.1| ribosomal protein S4 [Mesostigma viride]
 gi|14548249|sp|Q9MUN0|RR4_MESVI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|7259569|gb|AAF43870.1|AF166114_82 ribosomal protein S4 [Mesostigma viride]
          Length = 205

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI R++G+      K   N +        +  K+K S +G++L+ KQK+K 
Sbjct: 1   MSRYRGPRLKIVRKLGDLPGLTSKINKNLQLAEQNKGKKSTKTKLSQYGIRLQEKQKLKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+     ++A   +G T   L+ +LE RLD  V+R    PTI  ARQ VNH H
Sbjct: 61  NYG-VTEKQLLLYIRKARTIKGSTGQMLLQYLEMRLDNTVFRLGLAPTIAGARQLVNHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           ++VN R V I SY+CK  D++ ++  +K    VL          +P ++ +  D + AT 
Sbjct: 120 IMVNNRIVTIPSYKCKPKDILSIRNNNKSRNLVLNNLASPSVSKIPNHLLLKKDTLTATV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I         P+ +   LVVE+YSR
Sbjct: 180 NGIVERK---SIPLEINELLVVEYYSR 203


>gi|294337238|emb|CAQ52768.1| ribosomal protein S4 [Porotrichodendron robustum]
          Length = 202

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +  +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKISNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541030|gb|AEB21739.1| ribosomal protein S4 [Pseudocephalozia lepidozioides]
          Length = 199

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P     +           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTGKAPKQKSGF---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE RLD  + R    PTI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMAPTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + +     L +   +P +++ +   +  +  +I
Sbjct: 117 NKNIVDIPSYNCEPGDIITIRDKQKSQSVITRNINLFQNLKIPSHLTFDPIKLFGSINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|222103474|gb|ACM44266.1| small ribosomal protein subunit 4 [Rhytidium rugosum]
 gi|222103550|gb|ACM44304.1| small ribosomal protein subunit 4 [Rhytidium rugosum]
          Length = 202

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIDLKINELLVVEYYSR 200


>gi|6002059|emb|CAA58937.1| ribosomal protein S4 [Laurus nobilis]
          Length = 196

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  R +G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRCLGALPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  + + +  A +      + R D+ ++++ +        
Sbjct: 116 ILVNGRVVDIPSYRCKPRDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NQIIDIK---WIGLKINELLVVEY 196


>gi|330444034|ref|YP_004377020.1| 30S ribosomal protein S4 [Chlamydophila pecorum E58]
 gi|328807144|gb|AEB41317.1| ribosomal protein S4 [Chlamydophila pecorum E58]
          Length = 208

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 4/207 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K++I RR G N++GR ++P+  + + PG HG +RK K S +GLQL  KQK+K 
Sbjct: 1   MARYCGPKNRIARRFGANIFGRSRNPLLKKPHPPGQHGMQRK-KKSDYGLQLEEKQKLKA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G I EK+    F+E   ++GD +   +   E RLD +VYR  F  +IFAA+Q V H H
Sbjct: 60  CFGMILEKQLVKAFREVV-NKGDVAKLFLERFECRLDNMVYRMGFARSIFAAQQLVAHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           VLVNG+ V+  S+  + G  I +K+KSK+L SV +A +   E  +P YIS++  N     
Sbjct: 119 VLVNGKRVDRRSFFVRPGMQISLKEKSKRLQSVKDALEAKDESSLPSYISLDKANCKGEL 178

Query: 180 VRIPSSLK-DVPYPVIMQPNLVVEFYS 205
           +  P   + +   P+ +   +V EF S
Sbjct: 179 LLSPEQDQIEAQLPLPINVAVVCEFLS 205


>gi|60117193|ref|YP_209527.1| ribosomal protein S4 [Huperzia lucidula]
 gi|62287201|sp|Q5SD08|RR4_HUPLU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|50660001|gb|AAT80723.1| ribosomal protein S4 [Huperzia lucidula]
          Length = 202

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+GE      K+P     Y   ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLGELPGLTRKTPKLKPDY---INKSTPNKKVSQYCIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           ++G ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H
Sbjct: 58  HHG-LAEQQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R++N+ SYRCK  D+I  + + +  A + +  + ++   +P +++++    V   
Sbjct: 117 ILVNNRAINVPSYRCKPKDIITTRDRPESRARITKNYEFSQTYKIPNHLTLHSLQSVGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NKIVDR---ESIDLNINELLVVEYYSR 200


>gi|6002035|emb|CAA58925.1| ribosomal protein S4 [Cocos nucifera]
          Length = 196

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + + L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRICLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK   +I  K K +  A +          ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRGIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|195984192|gb|ACG63786.1| rps4 [Costesia spongiosa]
          Length = 199

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPEARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +    +++  VP +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLEINELLVVEYYSR 197


>gi|58584920|ref|YP_198493.1| 30S ribosomal protein S4 [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497678|sp|Q5GRX3|RS4_WOLTR RecName: Full=30S ribosomal protein S4
 gi|58419236|gb|AAW71251.1| Ribosomal protein S4 [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 204

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 89/206 (43%), Positives = 130/206 (63%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   + K++I RR+G NLWGR K PVN R Y PG  G     + S FG Q  A +K K 
Sbjct: 1   MTTVINRKYRISRRLGINLWGRAKDPVNRRKYPPGQRGILGFKRLSDFGKQFAAHKKFKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY  IS K+ R IF +A   +G T+ N I  LESRL +++Y +  VPTI++A+Q ++H+H
Sbjct: 61  YYA-ISSKQLRRIFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VN + VNI SYR K GD++++++++ ++  ++EA Q  ER  P+Y+  +       ++
Sbjct: 120 VTVNDKIVNIPSYRVKPGDIVKIRERAAKIPVIVEAVQKQERKAPDYLEADSKEYSVKYL 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP    +VPY   M+ NLVVEFYSR
Sbjct: 180 RIPQ-YSEVPYSADMEVNLVVEFYSR 204


>gi|67035630|gb|AAY62746.1| small ribosomal protein subunit 4 [Orthodicranum flagellare]
          Length = 200

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P         ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K  A +++    +++  +P +++ +         +
Sbjct: 117 VNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 177 I---XDQESIGLKINELLVVEYYSR 198


>gi|222103478|gb|ACM44268.1| small ribosomal protein subunit 4 [Niphotrichum ericoides]
          Length = 202

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P    +    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N        
Sbjct: 117 ILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDHESIGLKINELLVVEYYSR 200


>gi|328541070|gb|AEB21759.1| ribosomal protein S4 [Zoopsis macrophylla]
          Length = 199

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTSKTLKLKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+   E RLD  + R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTILRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNDIVDIPSYNCEPGDIIMIRDKPKSQSMITKNINLFQNLKIPSHLAFDPIKLCGSVNQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 IDR---ESVNLKINELLVVEYYSR 197


>gi|294337263|emb|CAQ52780.1| ribosomal protein S4 [Pseudoscleropodium purum]
          Length = 202

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLNYSFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|197294230|ref|YP_001798771.1| 30S ribosomal protein S4 [Candidatus Phytoplasma australiense]
 gi|226699101|sp|B1V8Z1|RS4_PHYAS RecName: Full=30S ribosomal protein S4
 gi|171853557|emb|CAM11423.1| 30S ribosomal protein S4 [Candidatus Phytoplasma australiense]
          Length = 198

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+   S  KI RR+  ++    K  +  R+Y PG HGQ R++K S +GLQL+ KQK++ 
Sbjct: 1   MSRYTGSTWKISRRLNYSITETGKE-LRKRAYAPGQHGQ-RRAKISDYGLQLKEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FR  F+ A + +G      +  LESRLD IVYR  F  T   ARQ VNH H
Sbjct: 59  TYG-MSEKQFRKTFERASKLKGIHGEMFLVLLESRLDNIVYRLGFAKTRAQARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLV G+ V+I SY  K G  I +++KSK L  V E  +  +    +Y+S++   +   +V
Sbjct: 118 VLVEGKKVDIASYSLKPGQTITLREKSKNLKIVEEVLK-NKFVRADYVSLD-KQLNGKYV 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   + +     +   L+VEFY+R
Sbjct: 176 RYPKRNEFL---AEINEQLIVEFYNR 198


>gi|294337176|emb|CAQ52738.1| ribosomal protein S4 [Hylocomiastrum pyrenaicum]
          Length = 202

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +     ++  +PE+++ +        
Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQRKSETIISKNIDFYQKYKIPEHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|67035596|gb|AAY62729.1| small ribosomal protein subunit 4 [Eustichia longirostris]
          Length = 199

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTDKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A V++    +++  VP +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSRAMVIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197


>gi|307244571|ref|ZP_07526676.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678]
 gi|306492098|gb|EFM64146.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678]
          Length = 201

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/202 (33%), Positives = 104/202 (51%), Gaps = 9/202 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              K K+ RR+G N+ G PK+         G    R   K + +G QL  KQ+++ YYG 
Sbjct: 6   RGPKFKLSRRLGLNVCGHPKAM-----NRAGKGTARSDKKLTPYGQQLLEKQRLRAYYG- 59

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           +SEK+ R   K+A +++  T   +I+ LE RLD +VYR     +I  ARQ V+H ++ VN
Sbjct: 60  VSEKQMRIYMKKAQKAKMTTGTAVITTLECRLDNLVYRMGLANSIRQARQMVSHGNIHVN 119

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184
           GR V+I SY    GD I +++K +         + A      Y++ +  N  A   R+P 
Sbjct: 120 GRKVDIPSYIVSVGDEISLREKYRTNELFKANFEAAALSEYPYLTKDQANFSAVLTRLPE 179

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    P+ +   LVVEFYS+
Sbjct: 180 REE---VPIEINDALVVEFYSK 198


>gi|294337246|emb|CAQ52772.1| ribosomal protein S4 [Porotrichum fruticosum]
          Length = 202

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|118626087|emb|CAL39347.1| small ribosomal protein 4 [Cephalozia crassifolia]
          Length = 202

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGVLPGLTSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   ++I SY C  GD+I ++ K K    + +   L ++  +P + + +   +  + 
Sbjct: 117 ISMNNDMIDIPSYNCDPGDIITMRNKRKSELLITKNINLFQKLKMPSHSTFDPTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LV E+YSR
Sbjct: 177 NQIVNR---EGVNLKINELLVAEYYSR 200


>gi|328541032|gb|AEB21740.1| ribosomal protein S4 [Pseudocephalozia paludicola]
          Length = 199

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K  RR+G       K+P     +           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKXIRRLGALPGLTGKAPKQKSGF---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE RLD  + R    PTI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMAPTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + +     L +   +P +++ +   ++ +  +I
Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSQSVITRNINLFQNSKIPSHLTFDPIKLLGSINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|77862537|gb|ABB04541.1| small ribosomal protein 4 [Marchantia chenopoda]
          Length = 201

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK  D+I +K + K  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|294337224|emb|CAQ52761.1| ribosomal protein S4 [Neckeropsis nitidula]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPTHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337234|emb|CAQ52766.1| ribosomal protein S4 [Pinnatella minuta]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D+I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|260770937|ref|ZP_05879866.1| SSU ribosomal protein S4p (S9e) [Vibrio furnissii CIP 102972]
 gi|260614174|gb|EEX39364.1| SSU ribosomal protein S4p (S9e) [Vibrio furnissii CIP 102972]
          Length = 188

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 9/185 (4%)

Query: 23  PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82
            K  ++     PG+HG RR     Y G+QLR KQK+++ YG + EK+FR+ +KEA R +G
Sbjct: 12  TKCKID---NAPGVHGARRGRLSEY-GVQLREKQKVRRIYGVL-EKQFRNYYKEAARLKG 66

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
           +T  NL+  LE RLD +VYR  F  T   ARQ V+H+ +LVNG+ VN+ S+     DV+ 
Sbjct: 67  NTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKAILVNGKVVNVPSFNVAANDVVA 126

Query: 143 VKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201
           +++K+K+ + +  A ++AE R+ P +I V+  +M  TF R+P           +   L+V
Sbjct: 127 IREKAKKQSRIKAALEVAEQREKPTWIEVDASSMEGTFKRLPERSD---LSADINEQLIV 183

Query: 202 EFYSR 206
           E YS+
Sbjct: 184 ELYSK 188


>gi|222103448|gb|ACM44253.1| small ribosomal protein subunit 4 [Brachythecium salebrosum]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337090|emb|CAQ52695.1| ribosomal protein S4 [Calyptothecium recurvulum]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SY+CK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|48527419|gb|AAT45842.1| small ribosomal protein 4 [Plagiochila spinulosa]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNIHSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + ++  L VE+YSR
Sbjct: 177 NQMINR---EWITLKIKELLDVEYYSR 200


>gi|228016658|gb|ACP51487.1| ribosomal protein S4 [Pinus albicaulis]
          Length = 203

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +          RK   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 59  HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + +N   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 118 IRINDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201


>gi|66990662|emb|CAI29109.1| small ribosomal protein 4 [Plagiochila strictifolia]
          Length = 197

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            ++ +        + +   LVVE+
Sbjct: 177 NQMINR---EWINLKINELLVVEY 197


>gi|18311341|ref|NP_563275.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13]
 gi|168205188|ref|ZP_02631193.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987]
 gi|168213270|ref|ZP_02638895.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969]
 gi|168216676|ref|ZP_02642301.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239]
 gi|169347143|ref|ZP_02866085.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495]
 gi|182625776|ref|ZP_02953543.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721]
 gi|26399586|sp|Q8XHW7|RS4B_CLOPE RecName: Full=Putative 30S ribosomal protein S4 B
 gi|18146025|dbj|BAB82065.1| 30S ribosomal protein S4 [Clostridium perfringens str. 13]
 gi|169296826|gb|EDS78955.1| ribosomal protein S4 [Clostridium perfringens C str. JGS1495]
 gi|170663264|gb|EDT15947.1| ribosomal protein S4 [Clostridium perfringens E str. JGS1987]
 gi|170715196|gb|EDT27378.1| ribosomal protein S4 [Clostridium perfringens CPE str. F4969]
 gi|177908932|gb|EDT71419.1| ribosomal protein S4 [Clostridium perfringens D str. JGS1721]
 gi|182381217|gb|EDT78696.1| ribosomal protein S4 [Clostridium perfringens NCTC 8239]
          Length = 197

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N+ G PK+         G    R   K S +G+QL  KQ+++ 
Sbjct: 1   MAKMMGPRFKMCRRLGLNVVGHPKAMKRA-----GRGTSRADKKLSDYGIQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + E++F     +A  S+      L+  LESRLD +VYR  F  +I  ARQ VNH H
Sbjct: 56  YYG-VMERQFTRYVDQAFNSKEQPGEALLMILESRLDNMVYRMGFASSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
            LVNG+ VNI S+R   GD + +++KS++    +   + +      Y+S   DN    F 
Sbjct: 115 FLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYVSKEEDNFKGIFT 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P+ +Q  L+VEFYS+
Sbjct: 175 RKPKREE---IPITIQEQLIVEFYSK 197


>gi|327395480|dbj|BAK12902.1| 30S ribosomal protein S4 RpsD [Pantoea ananatis AJ13355]
          Length = 176

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 6/181 (3%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86
           +      PG HG  RK + S +G QLR KQK+++ YG + E++FR+ +KEA R +G+T  
Sbjct: 1   MCKIEQAPGQHGA-RKPRLSDYGGQLREKQKVRRMYGVL-ERQFRNYYKEAARLKGNTGE 58

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           NL++ LE RLD +VYR  F  T   ARQ V+H+ VLVNGR VNI SY+    DV+ +++K
Sbjct: 59  NLLALLEGRLDNVVYRMGFGATRAEARQLVSHKSVLVNGRVVNIASYQVSPNDVVSIREK 118

Query: 147 SKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
           +K+ + V  A +LAE R+ P ++ V+   M   F RIP           +  +L+VE YS
Sbjct: 119 AKKQSRVKAALELAEQREKPTWLEVDAAKMEGVFKRIPERTD---LSADINEHLIVELYS 175

Query: 206 R 206
           +
Sbjct: 176 K 176


>gi|118443601|ref|YP_878412.1| 30S ribosomal protein S4 [Clostridium novyi NT]
 gi|152060919|sp|A0Q1B0|RS4B_CLONN RecName: Full=30S ribosomal protein S4 B
 gi|118134057|gb|ABK61101.1| ribosomal protein S4 [Clostridium novyi NT]
          Length = 196

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+             + R  K S +G+QL  KQK++ 
Sbjct: 1   MAKMRQPRFKLSRRLGVNIYGHPKAMKRAEGI------KSRGKKMSDYGIQLLEKQKVRA 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+FR   ++A +S+  T   L+  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 55  YYG-VMEKQFRRYVEKAMKSKDVTGDALLKLLECRLDNLVYRIGFANSIRQARQMVNHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
           +LVNG  V+I SY  K G+ + +K K ++         +L   ++P YI  ++DN     
Sbjct: 114 ILVNGSKVDIPSYEVKVGEEVTLKDKYRKNEMFSNNFLELRTFELP-YIEKDYDNFTGKL 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +RIP+  +    P+ +    VVE YS+
Sbjct: 173 IRIPNREE---IPIEVNEVAVVELYSK 196


>gi|67035648|gb|AAY62755.1| small ribosomal protein subunit 4 [Venturiella sinensis]
          Length = 199

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGILPGLTHKTPQLKSNS---INQSTSSKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ V+H+H+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVSHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K    +L+    +++  VP +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSQVIILKNVDFSQKFKVPNHLTFNSLEKKGIVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESVGLKINELLVVEYYSR 197


>gi|26399094|sp|P59136|RR4_CANTA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504379|emb|CAC80634.1| small ribosomal protein 4 [Canalohypopterygium tamariscinum]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D I +K + K  A + +      +  +P ++  N  +     
Sbjct: 117 ILVNGHIVDIPSYRCKPQDFITIKNQRKSQAIINKNMNFYRKYKIPNHLIYNSLDKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|118430304|ref|YP_874738.1| ribosomal protein S4 [Agrostis stolonifera]
 gi|125987750|sp|A1EA10|RR4_AGRST RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|118201213|gb|ABK79582.1| ribosomal protein S4 [Agrostis stolonifera]
          Length = 201

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199


>gi|290790850|gb|ADD63106.1| ribosomal protein S4 [Microlaena stipoides]
          Length = 201

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNIIFRLGMASTIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199


>gi|271964887|ref|YP_003339083.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
 gi|270508062|gb|ACZ86340.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
          Length = 204

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKY 61
           +    K ++ RR G  L  +       R Y PG HG++  + +   +GL+L  KQK++ Y
Sbjct: 2   RYTGPKVRLSRRAGVPLTRKAVRYFEERPYPPGEHGRKTNRRQTGDYGLRLMEKQKLRWY 61

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           Y  +SE++ R  +  A RS G +   L+  LESRL ++V RA   P+I+AARQ+V H H+
Sbjct: 62  YD-VSERQMRRYWDMALRSTGRSGAELVVLLESRLASLVLRAGLAPSIYAARQYVTHGHI 120

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATF 179
            V+GR V+I SY  K G VI V+Q+S+ +   + A++   A+  +  Y+SV+H ++  T 
Sbjct: 121 TVDGRKVDIPSYLVKPGQVIAVRQRSRAMQPFVAAAEGTYADDRIAPYLSVDHADLRFTV 180

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V  P+  + V   V +   LVVEFYSR
Sbjct: 181 VGRPAREQIV---VPVDEQLVVEFYSR 204


>gi|294337248|emb|CAQ52773.1| ribosomal protein S4 [Porotrichum substriatum]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337232|emb|CAQ52765.1| ribosomal protein S4 [Pinnatella alopecuroides]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D+I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|222103554|gb|ACM44306.1| small ribosomal protein subunit 4 [Marsupella commutata]
          Length = 198

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN
Sbjct: 57  LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
             +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  
Sbjct: 117 NDTVDISSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTV 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWVNLKINELLVVEYYSR 196


>gi|260655137|ref|ZP_05860625.1| ribosomal protein S4 [Jonquetella anthropi E3_33 E1]
 gi|260630059|gb|EEX48253.1| ribosomal protein S4 [Jonquetella anthropi E3_33 E1]
          Length = 206

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 115/208 (55%), Gaps = 10/208 (4%)

Query: 2   SKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           +++ + K KI RR+G N++G  K    ++ ++  PG    RR  K S +GLQL+ KQK++
Sbjct: 6   TRKTAPKGKIVRRLGANIFGNQKYDKLLSRKATPPGG-QPRRHGKQSIYGLQLQEKQKIR 64

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SE++   ++  A +  G T  N++  LESRLD +VYR  F  T   ARQ V H 
Sbjct: 65  FSYG-VSERQLHKVYTLAKKMEGVTGSNMLILLESRLDNVVYRLGFCTTRPQARQLVCHG 123

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVAT 178
           H  VNGR V+I S R   GDVI +++ SK +  + E  ++A     P ++S+       T
Sbjct: 124 HFAVNGRKVDIPSARVSAGDVISIRENSKDMKVLKENLEVASAVSQPAWLSL--SGTEGT 181

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +R+P   + V         +VVE+Y++
Sbjct: 182 VLRLPERSEIVCLA---DEQVVVEYYAK 206


>gi|328541132|gb|AEB21790.1| ribosomal protein S4 [Telaranea heterotexta]
          Length = 200

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GDVI +K K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCELGDVITIKDKQKSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|294337158|emb|CAQ52729.1| ribosomal protein S4 [Homalia webbiana]
 gi|294337160|emb|CAQ52730.1| ribosomal protein S4 [Homalia webbiana]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LV+   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVDDCIVDIPSYRCKPQDFITIKNQRKSETMISKNIEFYQKFKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337140|emb|CAQ52720.1| ribosomal protein S4 [Heterocladium heteropterum]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRPDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  VP++++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKVPDHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337082|emb|CAQ52691.1| ribosomal protein S4 [Brachythecium rivulare]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|77862553|gb|ABB04549.1| small ribosomal protein 4 [Riccia fluitans]
          Length = 201

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTFKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHQHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N  +V+I SY CK  D+I +K + K  + + +     ++  +P +++ +         
Sbjct: 117 LINNNTVDIPSYNCKPKDIITIKDRQKSQSIITKNLTFFQKQKIPNHLTFDLIQFKGLIN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIVDR---ECIYLKINELLVVEYYSR 199


>gi|67035728|gb|AAY62795.1| small ribosomal protein subunit 4 [Funariella curviseta]
          Length = 196

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K P    S       Q    K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGVLPGLTNKIPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-I 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN 
Sbjct: 56  TERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVND 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I VK + K  A + +    +++  VP +++ N         +I  
Sbjct: 116 CIVDIPSYRCKPDDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFNSTQKKGLVNQI-- 173

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 174 -LDRESIGLKINELLVVEYYSR 194


>gi|228016343|gb|ACP51177.1| ribosomal protein S4 [Pinus taeda]
          Length = 201

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK+  
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLHF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|6002045|emb|CAA58932.1| ribosomal protein S4 [Dioscorea polystachya]
          Length = 196

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDFKNQSRFGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  HYG-LTEQQLLRYIHIAGKAKGSTDQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +    +  + + +   ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKVLIQNSIESSPHEELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---LIGLKINELLVVEY 196


>gi|73748343|ref|YP_307582.1| 30S ribosomal protein S4 [Dehalococcoides sp. CBDB1]
 gi|289432391|ref|YP_003462264.1| ribosomal protein S4 [Dehalococcoides sp. GT]
 gi|90101688|sp|Q3ZZP7|RS4_DEHSC RecName: Full=30S ribosomal protein S4
 gi|73660059|emb|CAI82666.1| ribosomal protein S4 [Dehalococcoides sp. CBDB1]
 gi|288946111|gb|ADC73808.1| ribosomal protein S4 [Dehalococcoides sp. GT]
          Length = 207

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54
           MS+   +  ++ RR G+ L+ +      K     R   PG   G+ R+   S  G QLR 
Sbjct: 1   MSRETGAVCRMCRRSGDKLFLKGDKCVTKCVFEKRPKPPGPQLGRPRR--LSDRGQQLRQ 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ ++  YG ++E++FR  F  A+   G T  N++  LE RLD +++R  F  +   ARQ
Sbjct: 59  KQSIRWSYG-MTERQFRRFFGLANAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+LVNG+  +I SY  KEG  I V++ SK  A     ++  E + +P ++S++  
Sbjct: 118 IVMHGHILVNGQKTDIPSYLIKEGQEITVRETSKATAYFKTLAENIEAKAIPGWLSLDRK 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    + +P++              VVE+YSR
Sbjct: 178 TLSGKVISLPNAGD---IDARFDAQTVVEYYSR 207


>gi|328541100|gb|AEB21774.1| ribosomal protein S4 [Bazzania involuta]
          Length = 197

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+     S+           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N 
Sbjct: 57  TERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|294337216|emb|CAQ52757.1| ribosomal protein S4 [Neckera remota]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337144|emb|CAQ52722.1| ribosomal protein S4 [Heterocladium procurrens]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIASYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L        +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGSKINELLVVEYYSR 200


>gi|67036092|gb|AAY62972.1| small ribosomal protein subunit 4 [Cyrto-hypnum schistocalyx]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVRIIRRLGTLPGLTTKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337236|emb|CAQ52767.1| ribosomal protein S4 [Pinnatella mucronata]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T    +   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVSLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D+I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDLITIKDQRKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|222103446|gb|ACM44252.1| small ribosomal protein subunit 4 [Pleurozium schreberi]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L   LE RLD +++R    PTI  ARQ VNH H
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|26399101|sp|P59140|RR4_HYLSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504353|emb|CAC80756.1| small ribosomal protein 4 [Hylocomium splendens]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337086|emb|CAQ52693.1| ribosomal protein S4 [Callicostella cf. africana Rikkinen et al.
           21]
          Length = 202

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P    S    +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N        
Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQILDRD---SIGLKINELLVVEYYSR 200


>gi|51210012|ref|YP_063676.1| ribosomal protein S4 [Gracilaria tenuistipitata var. liui]
 gi|62287237|sp|Q6B8N4|RR4_GRATL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|50657766|gb|AAT79751.1| 30S ribosomal protein S4 [Gracilaria tenuistipitata var. liui]
          Length = 201

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+      K  ++ +    G HGQ+ + KPS + L+L  KQK++ 
Sbjct: 1   MSRYRGPRLRISRRLGDLPGLTRK--ISKKLSPAGEHGQQLR-KPSEYSLRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+     K A +  G T   L+  LE RLD +++R    PT+ AARQ VNH H
Sbjct: 58  NYG-LSEKQLSKYIKIAKKVTGSTGLILLQILEMRLDNVIFRLGLSPTLPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+N + V+I SY+CK GD+I+V+ K      V           +P ++ +N   + A  
Sbjct: 117 ILINKQKVSICSYQCKPGDIIDVQAKDSSQNLVKRYLSFPTLVGIPNHLELNTKTLNAKI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + M   LVVE+YSR
Sbjct: 177 NAIVER---ESVALQMNELLVVEYYSR 200


>gi|42520265|ref|NP_966180.1| 30S ribosomal protein S4 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|225630200|ref|YP_002726991.1| ribosomal protein S4 [Wolbachia sp. wRi]
 gi|81652701|sp|Q73HZ8|RS4_WOLPM RecName: Full=30S ribosomal protein S4
 gi|254764623|sp|C0R2Q8|RS4_WOLWR RecName: Full=30S ribosomal protein S4
 gi|42410003|gb|AAS14114.1| ribosomal protein S4 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|225592181|gb|ACN95200.1| ribosomal protein S4 [Wolbachia sp. wRi]
          Length = 204

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   + K++I RR+G NLWGR K PVN R Y PG HG     K S FG Q  A +K K 
Sbjct: 1   MTTVITRKYRISRRLGVNLWGRAKDPVNKRKYPPGQHGILGFKKLSDFGKQFAAHKKFKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY  IS K+ R  F +A   +G T+ N I  LESRL +++Y +  VPTI++A+Q ++H+H
Sbjct: 61  YYA-ISSKQLRRTFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VN + VNI SYR K GD+I++++++ ++  V+EA Q  ER  P+Y+  +       ++
Sbjct: 120 VTVNDKVVNISSYRVKPGDIIKIRERAAKIPVVVEAEQKQERKAPDYLEADSKEHSVKYL 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P    +VPY   M+ NLVVEFYSR
Sbjct: 180 RSPQ-YSEVPYSADMEVNLVVEFYSR 204


>gi|294337202|emb|CAQ52795.1| ribosomal protein S4 [Macrothamnium hylocomioides]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       ++P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNRTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  +E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLIEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|67035636|gb|AAY62749.1| small ribosomal protein subunit 4 [Sclerodontium pallidum]
          Length = 199

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K        +++ +  +++  VP +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|168335041|ref|ZP_02693154.1| 30S ribosomal protein S4 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 196

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 112/206 (54%), Gaps = 10/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ R +G N+ G PK+    +         R   K S +G+QL  KQ+++ 
Sbjct: 1   MAKMMGPRFKMCRSLGVNVVGHPKAMDRAK-----QGTSRDARKLSEYGVQLLEKQRLRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    ++A R+  +    +++ LE RLD IVYR  F  +   ARQ VNH H
Sbjct: 56  YYGVL-EKQFVRYVEKAFRAGSNPGPIILTSLEMRLDNIVYRMGFARSTRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
            L+NG+ V+  SY  KEGD I +K+KS++     E        +P Y+ ++ DN+  T +
Sbjct: 115 FLINGQKVDRPSYALKEGDTITLKEKSRESKIFAENMAGNNFALP-YLEMDIDNLTGTII 173

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P+  +    P+ +   L++EFYSR
Sbjct: 174 RKPTREE---LPIEINEQLIIEFYSR 196


>gi|294337168|emb|CAQ52734.1| ribosomal protein S4 [Homaliodendron piniforme]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + + ++  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNTEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|548874|sp|P36470|RR4_RHAHU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439964|emb|CAA82454.1| ribosomal protein S4 [Rhapis humilis]
          Length = 196

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +          ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|294337178|emb|CAQ52739.1| ribosomal protein S4 [Hylocomiastrum umbratum]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +     ++  +P++++ +        
Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITMKNQRKSETIISKNIDFYQKYKIPDHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|63145904|gb|AAY33890.1| small ribosomal protein 4 [Jensenia spinosa]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G  L G     + +RS            K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRAKIIRRLGT-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +L+N   VNI SY CK  DVI +K + +  + + +   L  E+ +P +++ +      + 
Sbjct: 117 ILINDDIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWIRLKINELLVVEYYSR 200


>gi|42560826|ref|NP_975277.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|331703280|ref|YP_004399967.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|61215585|sp|Q6MTW7|RS4_MYCMS RecName: Full=30S ribosomal protein S4
 gi|42492322|emb|CAE76919.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|256384411|gb|ACU78981.1| ribosomal protein S4 [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385243|gb|ACU79812.1| ribosomal protein S4 [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455723|gb|ADH21958.1| ribosomal protein S4 [synthetic Mycoplasma mycoides JCVI-syn1.0]
 gi|301321292|gb|ADK69935.1| ribosomal protein S4 [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
 gi|328801835|emb|CBW53988.1| 30S ribosomal protein S4 [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 208

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           MS+   S  K  RR G ++    K  S    R   PG HG+ R K K S +G QL+ KQK
Sbjct: 1   MSRFIGSTFKKSRRFGFSILETGKEFSKGKKRITTPGQHGKERAKVKVSEYGQQLQEKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +K  YG +SE++FR+ F +A + +G    N +  LESRLD IVYR  F  T   ARQ VN
Sbjct: 61  VKFMYG-LSERQFRNTFAKAKKMQGILGTNFLVLLESRLDNIVYRLGFSATRQGARQLVN 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H H+LVNG+ V+I SY    GD++EVK   K+   VLEA Q  E  + E++ VN + +  
Sbjct: 120 HGHILVNGKKVDIPSYLLSVGDLVEVKASMKKNEKVLEALQNNEATL-EFVKVNKNEVKG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            FVR+P   +       +  +L+VE+Y+R
Sbjct: 179 EFVRLPERTE---LSSEISESLIVEWYNR 204


>gi|294337242|emb|CAQ52770.1| ribosomal protein S4 [Porotrichum bigelovii]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ISVNDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L        +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGSKINELLVVEYYSR 200


>gi|118625987|emb|CAL39315.1| small ribosomal protein 4 [Metzgeria decipiens]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRTKIIRRLGALPGLTSKTFKAKSSY---IDRPASNKKISQYRVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H
Sbjct: 58  HYG-LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +   ++ + 
Sbjct: 117 ISINKDIVDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+ +        + +   LVVE+YSR
Sbjct: 177 NRMINR---EWIDLKINELLVVEYYSR 200


>gi|257784936|ref|YP_003180153.1| 30S ribosomal protein S4 [Atopobium parvulum DSM 20469]
 gi|257473443|gb|ACV51562.1| ribosomal protein S4 [Atopobium parvulum DSM 20469]
          Length = 197

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++G +      +  + R        +RR+ + S +G+QLR KQK K 
Sbjct: 1   MAIDRTPVLKRCRQLGIDPVVMGINKTSNREP------RRRRRQESEYGMQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E +F   ++ A ++ G T  NL+S LE+RLD +++R  F  T   ARQ V H H
Sbjct: 55  IYGVL-ENQFHGYYEMAKKNPGITGDNLMSILETRLDNVIFRLGFARTRKEARQTVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VNG+ V+I SYR K GDVI V  K+K L  + EA   +E   VP ++ V+ + +  T 
Sbjct: 114 ITVNGQRVDIPSYRVKSGDVIAVASKAKDLLPIKEALISSEHMAVPAWLEVDIEKLQGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++P+  +     + +   L+VE YS+
Sbjct: 174 LQLPTRDQ---IDLEIDAQLIVELYSK 197


>gi|77862527|gb|ABB04536.1| small ribosomal protein 4 [Dumortiera hirsuta]
          Length = 201

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTSTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N  +V+I SY CK  DVI +K +SK  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNTVDIPSYNCKPKDVITIKDRSKSQSIITKNLNSFQKQKIPNHLAFDLMQIKGIVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWISLKINELLVVEYYSR 199


>gi|328541042|gb|AEB21745.1| ribosomal protein S4 [Lembidium nutans]
          Length = 199

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K       Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE R D  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSQSVITKNINLFQNLKIPSHLTFDSIKLSGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197


>gi|294337279|emb|CAQ52788.1| ribosomal protein S4 [Thamnobryum tumidicaule]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLK---FSSINQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A R++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARRAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +        
Sbjct: 117 ILVNDCMVDIPSYRCKPQDFITIKDQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|222103516|gb|ACM44287.1| small ribosomal protein subunit 4 [Niphotrichum ericoides]
          Length = 203

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +Y
Sbjct: 4   RYRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 60

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+L
Sbjct: 61  G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHIL 119

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +
Sbjct: 120 VNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQ 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 180 I---LDHESIGLKINELLVVEYYSR 201


>gi|270307867|ref|YP_003329925.1| ribosomal protein S4 [Dehalococcoides sp. VS]
 gi|270153759|gb|ACZ61597.1| ribosomal protein S4 [Dehalococcoides sp. VS]
          Length = 207

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54
           MS+   +  ++ RR G+ L+ +      K     R   PG   G+ R+   S  G QLR 
Sbjct: 1   MSRETGAVCRMCRRSGDKLFLKGDKCVTKCVFEKRPKAPGPQLGRPRR--LSDRGQQLRQ 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ ++  YG ++E++FR  F  A+   G T  N++  LE RLD +++R  F  +   ARQ
Sbjct: 59  KQSIRWSYG-MTERQFRRFFGLANAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+LVNG+  +I SY  KEG VI V++ SK  A     ++  E + +P ++S++  
Sbjct: 118 IVMHGHILVNGQKTDIPSYLIKEGQVITVRETSKATAYFKTLAENIEAKAIPGWLSLDRK 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    + +P++              VVE+YSR
Sbjct: 178 TLSGKVISLPAAGD---IDARFDAQTVVEYYSR 207


>gi|77019151|emb|CAH60181.1| chloroplast 30S ribosomal protein S4 [Dryptodon austrofunalis]
          Length = 199

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197


>gi|77862559|gb|ABB04552.1| small ribosomal protein 4 [Sauteria alpina]
          Length = 201

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKFGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK  DVI +K++S   + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNMVDIPSYNCKPKDVITIKERSNSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|294337112|emb|CAQ52706.1| ribosomal protein S4 [Entodon dregeanus]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDSIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|228016595|gb|ACP51425.1| ribosomal protein S4 [Abies firma]
          Length = 201

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P     Y      +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD+ P +++ N        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDILPNHLTFNSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|222103476|gb|ACM44267.1| small ribosomal protein subunit 4 [Codriophorus fascicularis]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +
Sbjct: 119 VNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 179 I---LDHESIGLKINELLVVEYYSR 200


>gi|284988799|ref|YP_003407353.1| 30S ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
 gi|284062044|gb|ADB72982.1| ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
          Length = 200

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/200 (39%), Positives = 111/200 (55%), Gaps = 5/200 (2%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K +I R +G  L  +       R Y PG HG++R+    Y   +LR KQ+++  Y  IS
Sbjct: 6   PKVRISRALGIPLTPKAVEYFERRPYPPGEHGRKRRKDSDY-STRLREKQRLRAQYD-IS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R+ F  A R+ G T   LI  LESRLD  V RA F  T++ ARQFV H+HVLVNG+
Sbjct: 64  ETQLRAAFDRARRTGGKTGEALIQDLESRLDATVLRAGFARTVYQARQFVTHQHVLVNGK 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
            V+  SYR K GD +++ +KS+     + A+  A    P Y+ V   ++VA   R+P   
Sbjct: 124 RVDRPSYRLKPGDFVQIAEKSRTKEPFVVAASGAHATPPAYLEVCLADLVARVERVPDRD 183

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           +    PV+ +  LVVE YSR
Sbjct: 184 E---VPVVCEEQLVVEHYSR 200


>gi|328541118|gb|AEB21783.1| ribosomal protein S4 [Acromastigum anisostomum]
          Length = 197

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+  +  SY           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGALPGLTSKTLKSKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +I +
Sbjct: 117 NIVDIPSYNCELGDIITIRDKEKSQSIITKNINLFQNLKIPSHLTFDLIKLCGSINQIVN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   L+VE+YSR
Sbjct: 177 R---ESIDLKINELLIVEYYSR 195


>gi|294337256|emb|CAQ52777.1| ribosomal protein S4 [Pterobryopsis hoehnelii]
          Length = 202

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SY+CK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNSCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|77862523|gb|ABB04534.1| small ribosomal protein 4 [Cryptomitrium himalayense]
          Length = 201

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   ++I SY CK  D+I +K + K  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNLIDIPSYNCKPKDLITIKDRPKSKSIITKNLNCFQKPKIPNHLTFDLTQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++          + +   LVVE+YSR
Sbjct: 177 QVIDR---EWIFLKINELLVVEYYSR 199


>gi|294337212|emb|CAQ52755.1| ribosomal protein S4 [Neckera complanata]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|67035628|gb|AAY62745.1| small ribosomal protein subunit 4 [Chorisodontium mittenii]
 gi|222103508|gb|ACM44283.1| small ribosomal protein subunit 4 [Orthodicranum montanum]
 gi|222103538|gb|ACM44298.1| small ribosomal protein subunit 4 [Orthodicranum montanum]
          Length = 199

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++    +++  +P +++ +         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|26399168|sp|Q9FSA4|RR4_SPHDO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|10933877|emb|CAC14065.1| small ribosomal protein 4 [Sphaerocarpos donnellii]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A R++G T   L+   E RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARRAKGSTGEVLLQLSEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541056|gb|AEB21752.1| ribosomal protein S4 [Kurzia gonyotricha]
          Length = 200

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+      Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKTLKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE RLD  + R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I +++K K  + V +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNDIVDIPSYNCEPGDIITIREKQKSQSVVTKNINLFQNLKIPSHLTFDSMKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197


>gi|83319988|ref|YP_424224.1| 30S ribosomal protein S4 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|90101693|sp|Q2SSN9|RS4_MYCCT RecName: Full=30S ribosomal protein S4
 gi|83283874|gb|ABC01806.1| 30S ribosomal protein S4 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 208

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           MS+   S  K  RR G ++    K  S    R   PG HG+ R K K S +G QL+ KQK
Sbjct: 1   MSRFIGSTFKKSRRFGFSILETGKEFSKGKKRITTPGQHGKERAKVKVSEYGQQLQEKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +K  YG +SE++FR+ F +A + +G    N +  LESRLD IVYR  F  T   ARQ VN
Sbjct: 61  VKFMYG-LSERQFRNTFAKAKKMQGILGTNFLVLLESRLDNIVYRLGFSATRQGARQLVN 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H H+LVNG+ V+I SY    GD++EVK   K+   VLEA Q  E  + E++ VN + +  
Sbjct: 120 HGHILVNGKKVDIPSYLLSVGDLVEVKASMKKNEKVLEALQNNEATL-EFVKVNKNEVKG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            FVR+P   +       +  +L+VE+Y+R
Sbjct: 179 EFVRLPERNE---LNSEISESLIVEWYNR 204


>gi|26399166|sp|Q9FS90|RR4_SPLSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|10798708|emb|CAC12833.1| small ribosomal protein 4 [Splachnum sphaericum]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +  +  ++  +P ++  N        
Sbjct: 117 ILVNEHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|328541092|gb|AEB21770.1| ribosomal protein S4 [Bazzania nitida]
          Length = 198

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKVIRRLGALPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N
Sbjct: 57  LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY CK GD+I ++ K K  + + +   L +   VP +++ +   +  +  +  
Sbjct: 117 NNIVDIPSYNCKPGDIIAIRDKQKSQSMITKNINLFQNLKVPSHLTFDSIKLCGSINQTI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWINLKINELLVVEYYSR 196


>gi|48527373|gb|AAT45819.1| small ribosomal protein 4 [Plagiochila exigua]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI R +G       K+    +S    L       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRXKIXRCLGSLPGLTSKTL---KSKSGSLDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  PYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +K K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISLNNDIVDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +        + +   LVVE+YSR
Sbjct: 177 NQMINR---EWINLKINEWLVVEYYSR 200


>gi|63191679|gb|AAY34801.1| small ribosomal protein subunit 4 [Isodrepanium lentulum]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + KI RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K++ K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKKQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LNRESIGLKINELLVVEYYSR 200


>gi|26399099|sp|P59139|RR4_HOOLU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504369|emb|CAC80629.1| small ribosomal protein 4 [Hookeria lucens]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   VNI SYRCK  D I +K + K  A + +  +  ++   P +++ +        
Sbjct: 117 IGVNDCIVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI   L      + +   LVVE+YSR
Sbjct: 177 NRI---LDRESTGLKINELLVVEYYSR 200


>gi|67035594|gb|AAY62728.1| small ribosomal protein subunit 4 [Archidium donnellii]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     +    ++      K S + ++L  KQK++ +YG
Sbjct: 4   YRGPRVKIIRRLGALPGLTNKTSELKSNS---VNQSTSNKKISQYRIRLEEKQKLRFHYG 60

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 61  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 119

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  + V++    +++  VP ++++N         +I
Sbjct: 120 NNCIVNIPSYRCKPQDFITIKNRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI 179

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 180 ---LNHESIGLKINELLVVEYYSR 200


>gi|152060930|sp|Q5PBD6|RS4_ANAMM RecName: Full=30S ribosomal protein S4
          Length = 204

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 94/198 (47%), Positives = 128/198 (64%), Gaps = 2/198 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G NLWGR K PV TR+Y  G HG     K S FG Q  A QK K YY  +S 
Sbjct: 8   KYRASRRLGVNLWGRSKDPVATRNYPSGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 66

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+  + F  A   +GDT  NL+  LESRL  +VY A FVPT+F+ARQ V+H+HV VNG+ 
Sbjct: 67  KQLTNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 126

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           VNI S+  K GDV+++++++ +L  VL A Q  ER VP+++ V+     A ++R+P   +
Sbjct: 127 VNIPSFSVKPGDVVQIRERATELPMVLAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE 186

Query: 188 DVPYPVIMQPNLVVEFYS 205
            VPYP  M+ NLVVEF+S
Sbjct: 187 -VPYPANMEVNLVVEFFS 203


>gi|313665172|ref|YP_004047043.1| ribosomal protein S4 [Mycoplasma leachii PG50]
 gi|312949285|gb|ADR23881.1| ribosomal protein S4 [Mycoplasma leachii PG50]
          Length = 208

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           MS+   S  K  RR G ++    K  S    R   PG HG+ R K K S +G QL+ KQK
Sbjct: 1   MSRFIGSTFKKSRRFGFSILETGKEFSKGKKRITTPGQHGKERAKVKVSEYGQQLQEKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +K  YG +SE++FR+ F +A + +G    N +  LESRLD IVYR  F  T   ARQ VN
Sbjct: 61  VKFMYG-LSERQFRNTFAKAKKMQGILGTNFLVLLESRLDNIVYRLGFSATRQGARQLVN 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H H+LVNG+ V+I SY    GD++EVK   K+   VLEA Q  E  + E++ VN + +  
Sbjct: 120 HGHILVNGKKVDIPSYLLSVGDLVEVKSSMKKNEKVLEALQNNEATL-EFVKVNKNEVKG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            FVR+P   +       +  +L+VE+Y+R
Sbjct: 179 EFVRLPERNE---LNSEISESLIVEWYNR 204


>gi|159106866|ref|YP_001531285.1| ribosomal protein S4 [Lolium perenne]
 gi|166897630|sp|P69646|RR4_LOLPR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|158934400|emb|CAO85978.1| ribosomal protein S4 [Lolium perenne]
          Length = 201

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQTLMASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199


>gi|83416514|gb|ABC18277.1| small ribosomal subunit protein 4 [Herbertus aduncus]
          Length = 200

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K   +  SY   +       K S + ++L  KQK+  +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLXFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ 
Sbjct: 58  G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHIS 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +
Sbjct: 117 INNDIVDIPSYXCEPGDIITIKNKQKXQSIITKNINLFQKLKIPNHLTFDLTKLHGSVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +        + +   L VE+YSR
Sbjct: 177 MINR---EWVNLKINELLXVEYYSR 198


>gi|328541062|gb|AEB21755.1| ribosomal protein S4 [Telaranea trilobata]
          Length = 200

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+      Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKTLKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRTARKAKGSTGQVSLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHIPI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P ++  +   +  +  R 
Sbjct: 117 NYNIVDIPSYNCEPGDIITIRAKPKSQSVITKNINLFQNLKIPSHLIFDSTKLCGSINRT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197


>gi|260677422|ref|YP_003208190.1| ribosomal protein S4 [Coix lacryma-jobi]
 gi|209361360|gb|ACI43275.1| ribosomal protein S4 [Coix lacryma-jobi]
          Length = 201

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN R V+I S+RCK  D+I  K   +    V      ++   +P++++V+        
Sbjct: 116 ILVNDRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199


>gi|26399106|sp|P59143|RR4_HYPDI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504363|emb|CAC81025.1| small ribosomal protein 4 [Hypopterygium didictyon]
          Length = 202

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N        
Sbjct: 117 ILVNGYIVDIPSYRCKPQDFINIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LNRESIGLKINELLVVEYYSR 200


>gi|25166523|dbj|BAC24713.1| rpsD [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 225

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR G +L+ +     + ++      PG HG  R+S+ S +G+QLR KQ
Sbjct: 20  MAKYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDHLPGQHG-SRRSRLSDYGIQLREKQ 78

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ Y  I E++F+  +K+A R +G+T  NL+  LESRLD +VYR  F  T   +RQ +
Sbjct: 79  KLRRMY-VILERQFKKYYKKAVRMKGNTGENLLILLESRLDNVVYRMGFGSTRLESRQLI 137

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +++N + +NI SY+ K  D IEVK+ +K+ + +  A +++E R+   +I V+   M
Sbjct: 138 SHKSIIINKKVINIPSYQIKPNDCIEVKEIAKKQSRIKAAIEISEQREKQSWIDVDRVKM 197

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F + P           +  +L++E YS+
Sbjct: 198 QGIFKKFPDRSD---LSSEINEHLIIELYSK 225


>gi|294792833|ref|ZP_06757980.1| ribosomal protein S4 [Veillonella sp. 6_1_27]
 gi|294794587|ref|ZP_06759723.1| ribosomal protein S4 [Veillonella sp. 3_1_44]
 gi|294454917|gb|EFG23290.1| ribosomal protein S4 [Veillonella sp. 3_1_44]
 gi|294456732|gb|EFG25095.1| ribosomal protein S4 [Veillonella sp. 6_1_27]
          Length = 195

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R  ++ K+ RR G N++G  K+    +         +R+ K S +G QL  KQK+K 
Sbjct: 1   MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY ++ E++F   + +A + +G T  N++  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 54  YY-NLLERQFVRYYDKAKKMQGVTGQNMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR V+I S+ CK GDVIE+++ S+         Q        YI  + D   ATF 
Sbjct: 113 ILVNGRRVDIPSFSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLDGFKATFT 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ +   L+VE YS+
Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195


>gi|289804412|ref|ZP_06535041.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 175

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/176 (40%), Positives = 110/176 (62%), Gaps = 6/176 (3%)

Query: 32  YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISF 91
             PG HG  RK + S +G+QLR KQK+++ YG + E++FR+ +KEA R +G+T  NL++ 
Sbjct: 5   QAPGQHGA-RKPRLSDYGVQLREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLAL 62

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RLD +VYR  F  T   ARQ V+H+ ++VNGR VNI SY+    DV+ +++K+K+ +
Sbjct: 63  LEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQS 122

Query: 152 SVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V  A +LAE R+ P ++ V+   M  T+ R P           +  +L+VE YS+
Sbjct: 123 RVKAALELAEQREKPTWLEVDAGKMEGTYKRKPERSD---LSADINEHLIVELYSK 175


>gi|77862509|gb|ABB04527.1| small ribosomal protein 4 [Asterella grollei]
          Length = 200

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY CK  D+I +K + K  + +++     ++  +P +++ +   +     +
Sbjct: 117 INNNPVDIPSYNCKPKDLITIKDRPKSKSIIIKNLNSFQKQKIPNHLTFDLTQVKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I            +   LVVE+YSR
Sbjct: 177 IIDR---EWIFFKINELLVVEYYSR 198


>gi|228016218|gb|ACP51054.1| ribosomal protein S4 [Pinus squamata]
          Length = 203

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +          RK   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKIIRRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G T   L+  LE RL+ I++R    PTI  ARQ VNH H
Sbjct: 59  HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201


>gi|328541076|gb|AEB21762.1| ribosomal protein S4 [Drucella integristipula]
          Length = 199

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+    +             K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRAKVIRRLGALPGLTSKTL---KPKSTHNDRSASNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+
Sbjct: 58  -LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ G++I V+ + K  + + +     +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGNIITVRDEQKSRSVITKNKDSFQNLKIPNHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   L+VE+YSR
Sbjct: 177 INR---EWIDLKINELLIVEYYSR 197


>gi|63101103|gb|AAY33176.1| small ribosomal protein 4 [Timmia megapolitana]
          Length = 199

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A +++    +++  VP +++ N+        +I
Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNRQKSQAILMKNIDFSQKYKVPNHLTFNYLQKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|118626075|emb|CAL39341.1| small ribosomal protein 4 [Odontoschisma macounii]
          Length = 202

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLRSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  V+R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   ++I SY C+ GDVI +K K K  + + +   L+++  +P +++ +   +  + 
Sbjct: 117 ISINNDIIDIPSYDCEPGDVITIKDKQKSRSIITKNINLSQKSKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LVVE+YSR
Sbjct: 177 DQIVNR---EWVNLKINELLVVEYYSR 200


>gi|228016097|gb|ACP50935.1| ribosomal protein S4 [Pinus rzedowskii]
          Length = 201

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RL+ I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRTKGSTGQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|67035626|gb|AAY62744.1| small ribosomal protein subunit 4 [Paraleucobryum enerve]
          Length = 199

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|328541150|gb|AEB21799.1| ribosomal protein S4 [Lepidozia ulothrix]
          Length = 200

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     ++           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTLKPKSNH---NDRSASNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|26399095|sp|P59137|RR4_CATCI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504381|emb|CAC80635.1| small ribosomal protein 4 [Catharomnion ciliatum]
          Length = 202

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D I +K + K    + +  +  ++  +P ++  N        
Sbjct: 117 ILVNGYIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLIYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDHESIGLKINELLVVEYYSR 200


>gi|92417449|gb|ABE76820.1| ribosomal protein subunit 4 [Pellia epiphylla]
          Length = 199

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     SY   ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRAKIIRRLGALPGLTSKTLKLESSY---INQSTPNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+++
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHGHIVI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N  +V+I SY C+  DVI +K ++K  + + +      +  +P +++ +      +  + 
Sbjct: 117 NDYTVDIPSYNCEPRDVITIKNRNKSQSLITKNIDSFRKPKIPNHLTFDFTKFRGSVNQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 IDR---ECIDLKINELLVVEYYSR 197


>gi|294337106|emb|CAQ52703.1| ribosomal protein S4 [Distichophyllum crispulum]
          Length = 202

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K      +    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGVLPGLTNKILQLKSNS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N        
Sbjct: 117 ILVNNFIVDIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|46811050|gb|AAT01843.1| small ribosomal protein 4 [Scapania nemorea]
          Length = 197

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +
Sbjct: 117 DTVDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSVNQTVN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---ECINLKINELLVVEYYSR 195


>gi|125662732|gb|ABN50316.1| small ribosomal protein 4 [Illicium verum]
          Length = 203

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 11/208 (5%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +
Sbjct: 2   SRYRGPRFKKIRRLGSLPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH 
Sbjct: 58  YG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHT 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMVAT 178
           LVNGR V+I SYRCK  D+I  + + +  A +  +   +++ ++P++++++         
Sbjct: 117 LVNGRLVDIPSYRCKPRDIITTRDEHRSRALIQNSIDSSQKEELPKHLTLHSLQYQYKGL 176

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  S       + +   LVVE+YSR
Sbjct: 177 VNQIIDSK---WVGLKINELLVVEYYSR 201


>gi|57234752|ref|YP_181245.1| 30S ribosomal protein S4 [Dehalococcoides ethenogenes 195]
 gi|90101687|sp|Q3Z954|RS4_DEHE1 RecName: Full=30S ribosomal protein S4
 gi|57225200|gb|AAW40257.1| ribosomal protein S4 [Dehalococcoides ethenogenes 195]
          Length = 207

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54
           MS+   +  ++ RR G+ L+ +      K     R   PG   G+ R+   S  G QLR 
Sbjct: 1   MSRETGAVCRMCRRSGDKLFLKGDKCVTKCVFEKRPKAPGPQLGRPRR--LSDRGQQLRH 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ ++  YG ++E++FR  F  A    G T  N++  LE RLD +++R  F  +   ARQ
Sbjct: 59  KQSIRWSYG-MTERQFRRFFGLATAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+LVNG+  +I SY  KEG  I V++ SK  A     ++  E + +P ++S++  
Sbjct: 118 IVMHGHILVNGQKTDIPSYLVKEGQEITVRETSKATAYFKTLAENIEAKAIPGWLSLDRK 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    + +P++              VVE+YSR
Sbjct: 178 TLSGKVISLPAAGD---IDARFDAQTVVEYYSR 207


>gi|313892885|ref|ZP_07826462.1| ribosomal protein S4 [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442238|gb|EFR60653.1| ribosomal protein S4 [Veillonella sp. oral taxon 158 str. F0412]
          Length = 195

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R  ++ K+ RR G N++G  K+    +         +R+ K S +G QL  KQK+K 
Sbjct: 1   MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY ++ E++F   + +A + +G T  N++  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 54  YY-NLLERQFVRYYDKAKKMQGVTGENMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR V+I SY CK GDVIE+++ S+         Q        YI  + +   ATF 
Sbjct: 113 ILVNGRRVDIPSYSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLEGFKATFT 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ +   L+VE YS+
Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195


>gi|303229707|ref|ZP_07316494.1| ribosomal protein S4 [Veillonella atypica ACS-134-V-Col7a]
 gi|303231269|ref|ZP_07318007.1| ribosomal protein S4 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514176|gb|EFL56180.1| ribosomal protein S4 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515629|gb|EFL57584.1| ribosomal protein S4 [Veillonella atypica ACS-134-V-Col7a]
          Length = 195

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R  ++ K+ RR G N++G  K+    +         +R+ K S +G QL  KQK+K 
Sbjct: 1   MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY ++ E++F   + +A + +G T  N++  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 54  YY-NLLERQFVRYYDKAKKMQGVTGQNMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR V+I SY CK GDVIE+++ S+         Q        YI  + +   ATF 
Sbjct: 113 ILVNGRRVDIPSYSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLEGFKATFT 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ +   L+VE YS+
Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195


>gi|66990672|emb|CAI29114.1| small ribosomal protein 4 [Plagiochila barteri]
          Length = 198

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  + K  + V +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGTEQKSQSIVTKNINLFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            ++ +        +     LVVE+
Sbjct: 177 NQMINR---EWLNLKTNEVLVVEY 197


>gi|157689420|gb|ABV65266.1| ribosomal protein S4 [Begonia cucullata]
          Length = 197

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 9/203 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K  RR+G       K P      G  L  Q   SK S + ++L  KQK++ +YG 
Sbjct: 1   RGPRFKKIRRLGALPGLTSKKP----RTGSDLKNQSHSSKKSQYRIRLEEKQKLRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+ VN
Sbjct: 56  LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIIFRLGIASTIPQARQLVNHRHIFVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
           G  V+I SYRCK  D+I  K + K  A +      +   +VP++++++         +I 
Sbjct: 116 GGIVDIPSYRCKPRDIITAKDEQKSRALIQNYLNSSPSEEVPKHLTLHPFQYKGLVNQII 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            S       + +   LVVE+YSR
Sbjct: 176 DSK---SVGLKINELLVVEYYSR 195


>gi|223931073|ref|YP_002586934.1| ribosomal protein S4 [Syntrichia ruralis]
 gi|219562287|gb|ACL27618.1| ribosomal protein S4 [Syntrichia ruralis]
          Length = 202

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K P    S     +      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   VNI SYRCK  D I +  + K    + +    +++  +P +++ N        
Sbjct: 117 ILVNNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDQESIGLKINELLVVEYYSR 200


>gi|77862507|gb|ABB04526.1| small ribosomal protein 4 [Asterella africana]
          Length = 201

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N  SV+I SY CK  D+I +K + K    + +     ++  +P +++ +   +     
Sbjct: 117 LINNNSVDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|6002017|emb|CAA58914.1| ribosomal protein S4 [Acorus calamus]
          Length = 196

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K        G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTSKGT----RPGSDLRNQFRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLLNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +    +      + R ++P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKVLIQNNMDSSTREELPKHLTLDSFQHKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WVGLKINELLVVEY 196


>gi|77862533|gb|ABB04539.1| small ribosomal protein 4 [Mannia androgyna]
          Length = 201

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK  D+I +K + K    + +     ++  +P +++ +   +     
Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|328541112|gb|AEB21780.1| ribosomal protein S4 [Telaranea diacantha]
          Length = 199

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + ++S L +   +P +++++   +  +  + 
Sbjct: 117 NENIVDIPSYNCEPGDIITIRDKQKSQSLITKSSSLFQNLKIPNHLTLDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---ESINLKINELLVVEYYSR 197


>gi|222103552|gb|ACM44305.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum]
          Length = 202

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D I +K +      + +     ++  +P +++ N  N     
Sbjct: 117 ILVNDRLVDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQILDRD---SIDLKINELLVVEYYSR 200


>gi|67035732|gb|AAY62797.1| small ribosomal protein subunit 4 [Quathlamba debilicostata]
          Length = 196

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+     S       Q    K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGVLPGLTNKTSQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SY CK  D I +K + K  A + +    +++  VP +++ +         +I   
Sbjct: 117 IVDIPSYCCKPEDSITIKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|6002077|emb|CAA58948.1| ribosomal protein S4 [Sagittaria sagittifolia]
          Length = 196

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +    V  +   +  + +P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKPRDIITTKDKQRSKTLVQNSIASSSHEGLPKHLTLDSSQYKGFV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       +     LVVE+
Sbjct: 176 NQIIDSK---WVGLKRNELLVVEY 196


>gi|77019145|emb|CAH60178.1| chloroplast 30S ribosomal protein S4 [Schistidium apocarpum]
          Length = 199

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197


>gi|328541106|gb|AEB21777.1| ribosomal protein S4 [Bazzania tricrenata]
          Length = 198

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N
Sbjct: 57  LTERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  
Sbjct: 117 NNIVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWINLKINELLVVEYYSR 196


>gi|328955886|ref|YP_004373219.1| SSU ribosomal protein S4P [Coriobacterium glomerans PW2]
 gi|328456210|gb|AEB07404.1| SSU ribosomal protein S4P [Coriobacterium glomerans PW2]
          Length = 198

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++G +      S          +   +R+ K S +G QLR KQK K 
Sbjct: 1   MAIDRTPVLKRCRQLGIDPVELGYSSKKE-----SIRQPKRRRKESEYGTQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +  A +  G T  NL++ LE+RLD +V+R  F  T   ARQ V H H
Sbjct: 56  IYGVL-EKQFRRYYFRALKMTGITGENLMTLLETRLDNVVFRLGFARTRKEARQTVRHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG  V+I SY  KEGDVI V  K + L  + EA   +ER +VP ++ V+ + +  + 
Sbjct: 115 FTVNGHRVDIPSYLVKEGDVIAVGAKFRDLLPIKEALISSERFEVPGWLEVDIEKLSGSV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +PS  +       ++  L++E YS+
Sbjct: 175 LSLPSREQ---ISTDIKEQLIIEHYSK 198


>gi|284047202|ref|YP_003397542.1| ribosomal protein S4 [Conexibacter woesei DSM 14684]
 gi|283951423|gb|ADB54167.1| ribosomal protein S4 [Conexibacter woesei DSM 14684]
          Length = 210

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTR-SYGPGLHGQRRKSKPSYFGLQLR 53
           M +      K+ RR G +L  +       KS +  R    PG HG  R+ + S +  QLR
Sbjct: 1   MGRYTGPVEKLSRREGVDLCLKGERRLNGKSALERRGPQPPGQHGNARRRRESVYAEQLR 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
            KQK K+YYG + EK+FR     A + R       L+  LE RLD +VYR     T   A
Sbjct: 61  EKQKAKRYYG-VREKQFRRYVAAATKKREGVVGEQLLQLLEQRLDNVVYRLGLASTRPQA 119

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNH 172
           RQFV H HVLVNG+  +I S + K GDV+ V  ++        A++   R V  ++  + 
Sbjct: 120 RQFVGHGHVLVNGQRCDIASRQVKPGDVVMVAPEAAIRPVSTVATEQMGR-VGAWLEADF 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D++    +R+P   +       +   L+VEFYSR
Sbjct: 179 DSLAGKVLRLPVRNE---IDAPVAEQLIVEFYSR 209


>gi|309322181|ref|YP_003934096.1| ribosomal protein S4 [Geranium palmatum]
 gi|197131486|gb|ACH47261.1| ribosomal protein S4 [Geranium palmatum]
 gi|300069274|gb|ADJ66395.1| ribosomal protein S4 [Geranium palmatum]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K   R+G       K P +     P      R SK   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKICRLGSLPGLTTKRPPDKSKSNP------RFSKKKEYQIRLKEKQKLRF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 55  HYG-LTERQLLKYVRIAGKAKGPTGPVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  ++K K    +      +    +P +++++        
Sbjct: 114 ILVNGRMVDIPSYRCKPRDIITAREKEKSRTLIQNYLDSSPHNKLPYHLTIHPLQYKGLV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + ++  LVVE+YSR
Sbjct: 174 NQIIARG---WVGLKIKELLVVEYYSR 197


>gi|80974154|gb|ABB53770.1| small ribosomal subunit protein 4 [Garovaglia powellii]
          Length = 202

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VN   VNI SYRCK  DVI VK +      + +     ++  +P +++          
Sbjct: 117 IFVNDCIVNIPSYRCKPQDVIIVKNEKNSEGVINKNEDFHQKYKIPNHLTYIFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NKI---LDRESIGLKINELLVVEYYSR 200


>gi|67035588|gb|AAY62725.1| small ribosomal protein subunit 4 [Trematodon longicollis]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +L+    +++  VP +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDQQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGVVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|67035706|gb|AAY62784.1| small ribosomal protein subunit 4 [Bucklandiella crispipila]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFNSLENKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197


>gi|328541090|gb|AEB21769.1| ribosomal protein S4 [Neogrollea notabilis]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+      Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTNKTLKPKSGY---NDRSTSNRKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHITI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NDNIVDIPSYNCQPGDFIIIRDKQKSQSIITKNFNLFQNSKIPSHLTFDSIKLYGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197


>gi|227495469|ref|ZP_03925785.1| ribosomal protein S4 [Actinomyces coleocanis DSM 15436]
 gi|226831016|gb|EEH63399.1| ribosomal protein S4 [Actinomyces coleocanis DSM 15436]
          Length = 206

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 116/210 (55%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R   + ++ R +G  L  +       R Y PG HG+ R+ + S + ++L+ KQ+++ 
Sbjct: 1   MANRSRRQVRLSRALGIALTPKAARYFERRPYAPGQHGRARRRQESDYAVRLKEKQRLRA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I E + R  F+EA R+ G T  NL+  LE RLD +V R+ F  TI  ARQ V HRH
Sbjct: 61  QYG-IREAQMRRAFEEALRAEGKTGSNLVELLEMRLDALVLRSGFARTIAQARQVVVHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176
           +LV+G+ V+  S+R K G  I+VK KS+       A+    RD    VP Y+ V  + + 
Sbjct: 120 ILVDGQIVDRPSFRVKPGQTIQVKPKSQTTVPFEIAAAGVHRDVLAPVPAYLDVELERLR 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           AT VR P   +    PV+    LVVE+YSR
Sbjct: 180 ATLVRRPERAE---VPVVCDDQLVVEYYSR 206


>gi|67035632|gb|AAY62747.1| small ribosomal protein subunit 4 [Holomitrium arboreum]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VN+ SYRCK  D I +K + K    +++    +++  +P +++ +         +I
Sbjct: 117 NNRIVNVPSYRCKPQDFITIKDRQKSQVMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|63100967|gb|AAY33108.1| small ribosomal protein 4 [Stoneobryum mirum]
          Length = 202

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+P    S     +      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVKIIRRLGVLPGLTNKTPQLKSSSA---NQLTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHII 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +
Sbjct: 119 VNHRIVDIPSYRCKPQDFITIKNRQKSQDIITKNIDFNQKSKIPNHLTYNFLEKKGFVNQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 179 IIDR---ELINLKINELLVVEYYSR 200


>gi|157689516|gb|ABV65314.1| ribosomal protein S4 [Lythrum flagellare]
          Length = 195

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR
Sbjct: 56  ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  +   K  A +      +   +VP +++++         +I  S
Sbjct: 116 IVDIPSYRCKPRDIITARDDQKSKAMIQNYLDSSPHEEVPNHLTLHPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLKINELLVVEYYSR 193


>gi|63101097|gb|AAY33173.1| small ribosomal protein 4 [Ptychomitrium gardneri]
          Length = 202

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K  A V++    ++   VP +++ N         +
Sbjct: 119 VNNRIVNIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQNYKVPNHLTFNSLEKKGLVNQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 179 I---LDHGSIGLKINELLVVEYYSR 200


>gi|3098226|gb|AAC15561.1| small ribosomal protein 4 [Leptotheca boliviana]
          Length = 200

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGVLPGLTNKTPQLKSNS---INQLTANKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITEQQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +
Sbjct: 117 INDRIVDIPSYRCKPQDFITIKDQRKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGVVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   L+VE+YSR
Sbjct: 177 I---LNRESIDLKINELLIVEYYSR 198


>gi|69216104|gb|AAZ03890.1| ribosomal protein S4 [Ginkgo biloba]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P      G     +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLRALPGLTSKRP----KSGNDPINRSSSGKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D I++R+    TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRSDNIIFRSGMALTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  DVI ++ + +  A +     L++RD  P +++++        
Sbjct: 116 LLVNDRVVDIPSYRCKPQDVITIRDQQRSRAIIKNNINLSQRDKMPNHLTLHSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI  S       + +   LVVE+YSR
Sbjct: 176 NRIIDSK---WINLKINELLVVEYYSR 199


>gi|328541068|gb|AEB21758.1| ribosomal protein S4 [Zoopsis leitgebiana]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGALPGLTSKTLKLKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+   E RLD  + R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTILRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNDIVDIPSYNCELGDIIMIRDKPKSQSMITKNINLFQNSKIPSHLAFDPIKLCGSVNQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 IDR---ESVNLKINELLVVEYYSR 197


>gi|3098150|gb|AAC15523.1| small ribosomal protein 4 [Bryobrittonia longipes]
          Length = 196

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +V+R    PTI  ARQ VNHRH+LVNG 
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNGC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A +++    +++  VP +++ +         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQAILIKNIDFSQKYKVPNHLTFDSLQKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|67035644|gb|AAY62753.1| small ribosomal protein subunit 4 [Hygrodicranum bolivianum]
          Length = 198

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTSKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|110801413|ref|YP_697048.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124]
 gi|168210337|ref|ZP_02635962.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626]
 gi|123344499|sp|Q0TMU2|RS4B_CLOP1 RecName: Full=30S ribosomal protein S4 B
 gi|110676060|gb|ABG85047.1| 30S ribosomal protein S4 [Clostridium perfringens ATCC 13124]
 gi|170711584|gb|EDT23766.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626]
          Length = 197

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59
           M+K    + K+ RR+G N+ G PK+            G  R  K  S +G+QL  KQ+++
Sbjct: 1   MAKMMGPRFKMCRRLGLNVVGHPKAMKRA------DRGTSRADKKLSDYGIQLLEKQRLR 54

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG + E++F     +A  S+      L+  LESRLD +VYR  F  +I  ARQ VNH 
Sbjct: 55  AYYG-VMERQFTRYVDQAFNSKEQPGEALLMILESRLDNMVYRMGFASSIRQARQMVNHG 113

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H LVNG+ VNI S+R   GD + +++KS++    +   + +      Y+S   DN    F
Sbjct: 114 HFLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYVSKEEDNFKGIF 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +    P+ +Q  L+VEFYS+
Sbjct: 174 TRKPKREE---IPITIQEQLIVEFYSK 197


>gi|46810996|gb|AAT01816.1| small ribosomal protein 4 [Calycularia crispula]
          Length = 197

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR G       K+      Y   ++      K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRPGALPGLTTKTLKLKSGY---INQSTSNRKISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ V+HRH+L+N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVSHRHILINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +V+I SY C+ GDVI  K + K  + +  ++ L ++ +VP +++ +      +  R+  
Sbjct: 117 DAVDIPSYNCEPGDVITTKDRQKSRSIITRSADLFQKPEVPNHLTFDLAQFRGSVNRMID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---ELIDLKINELLVVEYYSR 195


>gi|46811024|gb|AAT01830.1| small ribosomal protein 4 [Jungermannia leiantha]
          Length = 197

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K      SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +
Sbjct: 117 DIVDIPSYNCELGDIIAVKNKQKSQSIITKNINLFQKSKIPSHLTFDSAKLHGSVNQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWVHLKINELLVVEYYSR 195


>gi|67035700|gb|AAY62781.1| small ribosomal protein subunit 4 [Pseudobraunia californica]
          Length = 199

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R +NI SYRCK  D I +K + K  + +++    +++  +P +++ N         +I
Sbjct: 117 NNRIINIPSYRCKPQDFITIKDRQKSQSIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197


>gi|26399108|sp|P59144|RR4_HYPFI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504359|emb|CAC81023.1| small ribosomal protein 4 [Hypopterygium filiculaeforme]
          Length = 202

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+P    +    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTNKTPQLKSNL---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  + + +     ++  +P +++ N        
Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQRKSESIINKNINFYQKYKIPNHLTYNSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKVNELLVVEYYSR 200


>gi|307683499|dbj|BAJ19728.1| ribosomal protein S4 [Pseudotsuga sinensis var. wilsoniana]
          Length = 201

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P     Y      +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTEQQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +    + +   L +RD +P +++ N        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|14017574|ref|NP_114261.1| ribosomal protein S4 [Triticum aestivum]
 gi|26399159|sp|Q95H61|RR4_WHEAT RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|13928207|dbj|BAB47036.1| ribosomal protein S4 [Triticum aestivum]
          Length = 201

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLAIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 NKILDRK---WVGLKINELLVVEYYSR 199


>gi|6002025|emb|CAA58919.1| ribosomal protein S4 [Alstroemeria aurantiaca]
          Length = 196

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +       L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKIPRSRN----DLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +      + R ++P++++++        
Sbjct: 116 ILVNGRVVDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPREELPKHLTIDPFQYKGWV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|222103440|gb|ACM44249.1| small ribosomal protein subunit 4 [Bryoxiphium norvegicum subsp.
           japonicum]
          Length = 198

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196


>gi|140083429|gb|ABO84826.1| ribosomal protein S4 [Philonotis fontana]
          Length = 202

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N        
Sbjct: 117 ILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVV +YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVVYYSR 200


>gi|66990664|emb|CAI29110.1| small ribosomal protein 4 [Plagiochila fusifera]
          Length = 198

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLASKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ + K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNEQKSQSLVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            ++ +        + +   LVVE+
Sbjct: 177 NQMINR---EWINLKINEVLVVEY 197


>gi|238018666|ref|ZP_04599092.1| hypothetical protein VEIDISOL_00510 [Veillonella dispar ATCC 17748]
 gi|269798510|ref|YP_003312410.1| ribosomal protein S4 [Veillonella parvula DSM 2008]
 gi|282849905|ref|ZP_06259288.1| ribosomal protein S4 [Veillonella parvula ATCC 17745]
 gi|237865137|gb|EEP66427.1| hypothetical protein VEIDISOL_00510 [Veillonella dispar ATCC 17748]
 gi|269095139|gb|ACZ25130.1| ribosomal protein S4 [Veillonella parvula DSM 2008]
 gi|282580342|gb|EFB85742.1| ribosomal protein S4 [Veillonella parvula ATCC 17745]
          Length = 195

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R  ++ K+ RR G N++G  K+    +         +R+ K S +G QL  KQK+K 
Sbjct: 1   MATRREARFKLCRRFGVNVFGHAKALNRVKK-------DQRQKKMSEYGTQLLEKQKVKA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY ++ E++F   + +A + +G T  N++  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 54  YY-NLLERQFVRYYDKAKKMQGVTGQNMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR V+I S+ CK GDVIE+++ S+         Q        YI  + +   ATF 
Sbjct: 113 ILVNGRRVDIPSFSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLEGFKATFT 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ +   L+VE YS+
Sbjct: 173 RLPQREE---LPIEVNETLIVELYSK 195


>gi|67035614|gb|AAY62738.1| small ribosomal protein subunit 4 [Bryowijkia ambigua]
          Length = 199

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYIRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +    +++  VP +++ N         +I
Sbjct: 117 NNRIVSIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|77862535|gb|ABB04540.1| small ribosomal protein 4 [Mannia fragrans]
          Length = 201

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   ++I SY CK  D+I +K + K    + +     ++  +P +++ +   +     
Sbjct: 117 LINNNPIDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLVQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|156598018|gb|ABU85275.1| ribosomal protein S4 [Cycas micronesica]
          Length = 201

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P  +R+        R+    S + ++   KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLRTLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  DVI ++ + +  A + +   L+++D +P +++++        
Sbjct: 116 ILVNDRVVDIPSYRCKPRDVITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|324986467|ref|YP_004276338.1| ribosomal protein S4 [Pinus monophylla]
 gi|323522562|gb|ADX94904.1| ribosomal protein S4 [Pinus monophylla]
          Length = 201

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G T   L+  LE RL+ I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRVSRRAKGSTGQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|294337291|emb|CAQ52794.1| ribosomal protein S4 [Zelometeorium patulum]
          Length = 202

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D + +K + K    + +  +  ++  +P +++          
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|92417453|gb|ABE76822.1| ribosomal protein subunit 4 [Dicranoweisia cirrata]
          Length = 198

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|222084129|ref|YP_002519581.1| ribosomal protein S4 [Keteleeria davidiana]
 gi|220983681|dbj|BAH11447.1| ribosomal protein S4 [Keteleeria davidiana]
          Length = 201

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P     Y      +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ N        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFNSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|67035686|gb|AAY62774.1| small ribosomal protein subunit 4 [Microcampylopus leucogaster]
          Length = 199

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  + + +  + +++  VP +++ N         +I
Sbjct: 117 NNYIVNIPSYRCKPQDFITIKNRQKSQSIIAKNLEFSQKYKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LTHESIGLNINELLVVEYYSR 197


>gi|309322306|ref|YP_003934157.1| ribosomal protein S4 [Cedrus deodara]
 gi|228017102|gb|ACP51924.1| ribosomal protein S4 [Cedrus deodara]
 gi|307683232|dbj|BAJ19540.1| ribosomal protein S4 [Cedrus deodara]
          Length = 201

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P     Y      +    K S + ++   KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKALPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  + + +   L +RD +P +++ N        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRSIIKKNIDLFQRDKLPNHLTFNSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|222103466|gb|ACM44262.1| small ribosomal protein subunit 4 [Sanionia uncinata]
          Length = 202

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +
Sbjct: 119 VNNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200


>gi|63145910|gb|AAY33893.1| small ribosomal protein 4 [Jensenia difformis]
          Length = 202

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G  L G     + +RS            K S + ++L  KQK++ +
Sbjct: 2   SRYRGPRVKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFH 58

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+
Sbjct: 59  YG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHI 117

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFV 180
           L+N   VNI SY CK  DVI +K + +  + + +   L  E+ +P +++ +      +  
Sbjct: 118 LINDDIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 178 QIIDR---EWISLKINELLVVEYYSR 200


>gi|327399496|ref|YP_004340365.1| 30S ribosomal protein S4 [Hippea maritima DSM 10411]
 gi|327182125|gb|AEA34306.1| ribosomal protein S4 [Hippea maritima DSM 10411]
          Length = 208

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 106/213 (49%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M+       +  R +G  L+ +       K     R Y PG     R+   SY GL L  
Sbjct: 1   MAVYTGPACRRCRALGVKLFLKGDRCFTDKCAFERRPYPPGKSRNARRKMSSY-GLHLAE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG + E++FR  F+EA R +G+T  NL+  LE RLD +VYR+    +   AR+
Sbjct: 60  KQKAKAEYGVL-ERQFRKYFEEAKRQKGETGANLVVLLERRLDNVVYRSGMASSRREARR 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHD 173
            V H H+ VNG  V+I SY  ++GDVI V  K K          + + R    +I+V+ D
Sbjct: 119 LVTHGHIRVNGHKVDIPSYLVRKGDVITVSDKMKAKEEFKRRFEENSRRMSASWINVDLD 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N+ ATFV +P+     P       N +VE YS+
Sbjct: 179 NVSATFVDMPTRDDVQP---PFNENAIVELYSK 208


>gi|222103468|gb|ACM44263.1| small ribosomal protein subunit 4 [Drummondia sinensis]
          Length = 202

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 4   YRGPRVRIIRRLGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 60

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 61  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 119

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A + +    +++  VP +++ N         +I
Sbjct: 120 NDCIVNIPSYRCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI 179

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 180 ---LDRESIDLKINELLVVEYYSR 200


>gi|222103472|gb|ACM44265.1| small ribosomal protein subunit 4 [Gollania varians]
          Length = 202

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|67035560|gb|AAY62711.1| small ribosomal protein subunit 4 [Tristichium mirabile]
          Length = 199

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGILPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++  + +++  VP +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNVEFSQKSKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|294337218|emb|CAQ52758.1| ribosomal protein S4 [Neckera urnigera]
          Length = 202

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R     TI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMALTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|6002027|emb|CAA58920.1| ribosomal protein S4 [Arum italicum]
          Length = 196

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALAGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I  K K +  A +     L+   +VP++++++  +     
Sbjct: 116 ILVNGGIVDIPSYRCKPRDIIATKDKQRSKALIQNNIALSSHEEVPKHLTIDSFHNKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WIGLKINELLVVEY 196


>gi|67035678|gb|AAY62770.1| small ribosomal protein subunit 4 [Cladopodanthus speciosus]
          Length = 199

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  + + +  + +++  VP +++++         +I
Sbjct: 117 NDYIVNIPSYRCKPQDFIPIKNQQKSQSIIAKNIEFSQKYKVPNHLTLDSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L +    + M   LVVE+YSR
Sbjct: 177 ---LNNESIGLKMNELLVVEYYSR 197


>gi|72161417|ref|YP_289074.1| 30S ribosomal protein S4 [Thermobifida fusca YX]
 gi|90101732|sp|Q47R66|RS4_THEFY RecName: Full=30S ribosomal protein S4
 gi|71915149|gb|AAZ55051.1| SSU ribosomal protein S4P [Thermobifida fusca YX]
          Length = 203

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 118/206 (57%), Gaps = 6/206 (2%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    K ++ RR G  L  +       R Y PG HG+R +   S + ++   KQK++ YY
Sbjct: 2   RYTGPKVRLSRRAGVPLTRKAVKYFEKRPYPPGEHGRRVRRSTSDYAVRQAEKQKLRWYY 61

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
             +SEK+   +++ A +  G T   +I+ LE RL T++ RA F  +I+AARQF+NH H+ 
Sbjct: 62  D-LSEKQLARVYENAKKRPGRTGEEMIAELELRLATVLLRAGFAASIYAARQFINHGHIT 120

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFV 180
           V+G+ V+I SY+ K G ++ V++KS++L   +EA++   A+  +  Y++V+H ++    V
Sbjct: 121 VDGKKVDIPSYQVKPGQIVSVREKSRKLVPFIEAAEGVHADEKIASYLAVSHKDLTIAVV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P   +    PV     LVVE+Y+R
Sbjct: 181 DRPKREQ---VPVPFDEQLVVEYYAR 203


>gi|294337114|emb|CAQ52707.1| ribosomal protein S4 [Eurhynchiastrum pulchellum]
          Length = 202

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQLTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L   LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|6002071|emb|CAA58943.1| ribosomal protein S4 [Oncidium ansiferum]
          Length = 196

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P +       LH      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKIPRSRSDLQTQLH----SGKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  K K +  A +      + R ++P +++++        
Sbjct: 116 ILVNGRIVDIPSYRCKARDIITTKDKERSKALIQNYLVSSPRGELPNHLTIDSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
             I  S       + +   LVVE+
Sbjct: 176 NHIIDSK---WIGLKINELLVVEY 196


>gi|294337148|emb|CAQ52724.1| ribosomal protein S4 [Himantocladium plumula]
          Length = 202

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLINKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SY+CK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|222103438|gb|ACM44248.1| small ribosomal protein subunit 4 [Brothera leana]
          Length = 203

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+     +    +       K S + ++L  KQK++ +Y
Sbjct: 4   RYRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHY 60

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 61  G-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 119

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SYRCK  D I +K + K    V +  + +++  VP +++ N         +
Sbjct: 120 VNNYIVNIPSYRCKPQDFITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQ 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 180 I---LNKESIGLKINELLVVEYYSR 201


>gi|157689564|gb|ABV65338.1| ribosomal protein S4 [Stylobasium spathulatum]
          Length = 195

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR
Sbjct: 56  ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPQARQLVNHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  + + K  A +      + R ++P+++++          +I  S
Sbjct: 116 MVDIPSYRCKPQDIITARDEQKSRALIQNYLDSSPREELPKHLTLQPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLKINELLVVEYYSR 193


>gi|328541028|gb|AEB21738.1| ribosomal protein S4 [Zoopsis ceratophylla]
          Length = 199

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGNLPGLTSKTLKQKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++       A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+
Sbjct: 58  -LTERQLLKYVHVARKAKGSTGQLLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SY C+ GD++ ++ K K  + + +   L +   +P +++ +   +  +  +I
Sbjct: 117 NDDIVNIPSYNCEPGDILAIRDKQKSQSIITKNINLFQNLKMPSHLTFDSTKLCGSINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|331268173|ref|YP_004347822.1| ribosomal protein S4 [Chlorella variabilis]
 gi|325296350|gb|ADZ05070.1| ribosomal protein S4 [Chlorella variabilis]
          Length = 207

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 13/212 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54
           M++    K +I RR+GE      KS   TR + PG HG +++      SK S + ++L+ 
Sbjct: 1   MARYRGPKLRIIRRLGELPGLTQKS--CTREFPPGQHGPKKRGSGNQKSKESQYAVRLKE 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++  YG ISE++  S  +EA R +G T   L+  LE RLD I++R  F PTI AARQ
Sbjct: 59  KQKLRFNYG-ISERQLISYVREARRRKGSTGEILLQLLEMRLDNIIFRLGFAPTIAAARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            + H H+++N R V I SY CK  D + +   S++    +      E   P ++ +N + 
Sbjct: 118 MITHGHIVINKRRVTIPSYLCKIHDNVSIALNSEKFVKTVIERSTTELSAP-HLEINREK 176

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A         +     + +   LVVEFYSR
Sbjct: 177 FSAIVRETVPRDQ---VGLQINELLVVEFYSR 205


>gi|257064663|ref|YP_003144335.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476]
 gi|256792316|gb|ACV22986.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476]
          Length = 198

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 110/210 (52%), Gaps = 16/210 (7%)

Query: 1   MSKRESSKHKIDRRIGEN---LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57
           M+   +   K  R++G +   L    K     +          R+ K S + LQLR KQK
Sbjct: 1   MAIDRTPVLKRCRQLGIDPVVLGYSSKKESIRQPQ--------RRRKESEYALQLREKQK 52

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
            K  YG + EK+FR  FK+A    G T  NL+  LESRLD +V+R  F  T   ARQ V+
Sbjct: 53  AKFIYGVL-EKQFRGYFKKAKAMPGITGENLMRILESRLDNVVFRLGFARTRKEARQTVS 111

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176
           H H+ VNG+ VNI SYR + GD++ V  K+K L  +  A    ER  VP ++ V+ + + 
Sbjct: 112 HGHIYVNGKRVNIPSYRVRPGDLVSVAPKAKDLLVIKSALVSNERVQVPAWLEVDIEKLQ 171

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + + +P+  +     + ++  L+VE YS+
Sbjct: 172 GSVLSLPNRDQ---IDLDIREQLIVELYSK 198


>gi|77862541|gb|ABB04543.1| small ribosomal protein 4 [Monoclea gottschei]
          Length = 201

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSISNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK  D+I +K + K    + +     ++  +P +++ +   +     
Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLIQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|49182742|gb|AAT57833.1| small ribosomal protein [Lepicolea rara]
          Length = 195

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKTKSSY---IDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKEKSQSIITKNINLFQNLKIPSHLTFDSTKLCGSITQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWITLKINELLVVEYYSR 193


>gi|222103432|gb|ACM44245.1| small ribosomal protein subunit 4 [Polytrichum sphaerothecium]
          Length = 203

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +Y
Sbjct: 4   RFRGPRVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHY 60

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+L
Sbjct: 61  G-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHIL 119

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SYRCK  D I +K + +    +      +++  +P +++ N         +
Sbjct: 120 VNDCIVNIPSYRCKPQDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQ 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 180 I---LDRESISLKINELLVVEYYSR 201


>gi|77862511|gb|ABB04528.1| small ribosomal protein 4 [Asterella wallichiana]
          Length = 201

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTISGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK  D+I +K + K  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNPVDIPSYNCKPKDIITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLMQIKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|3098190|gb|AAC15543.1| small ribosomal protein 4 [Pohlia bolanderi]
          Length = 199

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDQQKSQIMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|47606918|gb|AAT36379.1| ribosomal protein subunit 4 [Pohlia nutans]
          Length = 199

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDQQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|222103524|gb|ACM44291.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum]
          Length = 203

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 121 NDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 181 LDRD---SIDLKINELLVVEYYSR 201


>gi|222103424|gb|ACM44241.1| small ribosomal protein subunit 4 [Blasia pusilla]
          Length = 202

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K   +   Y   L+      K S + ++L  KQK++ +YG 
Sbjct: 5   RGPRVKIIRRLGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG- 60

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N
Sbjct: 61  ITERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILIN 120

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
             +V+I SY CK  D+I +K + K  + + +     ++  +P +++ +         +I 
Sbjct: 121 NINVDIPSYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQII 180

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 181 DR---EWINLKINELLVVEYYSR 200


>gi|66990660|emb|CAI29108.1| small ribosomal protein 4 [Plagiochila squamulosa]
          Length = 198

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 8/205 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSL 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
            ++ ++       + +   L VE+Y
Sbjct: 177 NQMINA---EWINLKINELLAVEYY 198


>gi|66990658|emb|CAI29107.1| small ribosomal protein 4 [Plagiochila heterostipa]
          Length = 197

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            ++ +        + +   LVVE+
Sbjct: 177 NQMINR---EWINLKINEVLVVEY 197


>gi|22711973|ref|NP_683827.1| ribosomal protein S4 [Chaetosphaeridium globosum]
 gi|26399132|sp|Q8M9W2|RR4_CHAGL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|22416977|gb|AAM96577.1| ribosomal protein S4 [Chaetosphaeridium globosum]
          Length = 205

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P  +          + K K S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRIKIIRRLGILPGLTRKIPKKSMKLRSLSLQSKSKKKDSQYRIRLQEKQKLRY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG + E++     + A +++G T   L+  LE RLD  ++R    PTI AARQ VNH H
Sbjct: 61  HYG-LHERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPAARQLVNHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR VNI SYRCK  D I +  +++ +A + +      +  +P ++ +      AT 
Sbjct: 120 ILVNGRIVNIPSYRCKPQDSITINTRTQTIALIQQNLGTTRKTKLPSHLMLRSTENSATV 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I S        + +   LVVE+YSR
Sbjct: 180 KQIVSRQ---SVGLKINELLVVEYYSR 203


>gi|228017416|gb|ACP52233.1| ribosomal protein S4 [Larix occidentalis]
          Length = 201

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P     Y      +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +    + +   L +RD +P +++ N        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WIGLKINELLVVEYYSR 199


>gi|67035744|gb|AAY62803.1| small ribosomal protein subunit 4 [Chrysoblastella chilensis]
          Length = 199

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKIPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHLLV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K   K  A + +  + +++  VP ++  N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKNCQKSQAIISKNIEFSQQYKVPNHLIFNSLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|110803742|ref|YP_699619.1| 30S ribosomal protein S4 [Clostridium perfringens SM101]
 gi|123341536|sp|Q0SQI8|RS4B_CLOPS RecName: Full=30S ribosomal protein S4 B
 gi|110684243|gb|ABG87613.1| 30S ribosomal protein S4 [Clostridium perfringens SM101]
          Length = 197

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59
           M+K    + K+ RR+G N+ G PK+            G  R  K  S +G+QL  KQ+++
Sbjct: 1   MAKMMGPRFKMCRRLGLNVVGHPKAMKRA------DRGTSRADKKLSDYGIQLLEKQRLR 54

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG + E++F     +A  S+      L+  LESRLD +VYR  F  +I  ARQ VNH 
Sbjct: 55  AYYG-VMERQFTRYVDQAFNSKEQPGEALLMILESRLDNMVYRMGFASSIRQARQMVNHG 113

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H LVNG+ VNI S+R   GD + +++KS++    +   + +      YIS   DN    F
Sbjct: 114 HFLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYISKEEDNFKGIF 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +    P+ +Q  L+VEFYS+
Sbjct: 174 ARKPKREE---IPITIQEQLIVEFYSK 197


>gi|294337122|emb|CAQ52711.1| ribosomal protein S4 [Glossadelphus glossoides]
          Length = 202

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S     +      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|294337283|emb|CAQ52790.1| ribosomal protein S4 [Trachyloma planifolium]
          Length = 202

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K  A + +  +  ++  +P ++  +        
Sbjct: 117 ILVNDYIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLIYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIDLKINELLVVEYYSR 200


>gi|77862543|gb|ABB04544.1| small ribosomal protein 4 [Monosolenium tenerum]
          Length = 201

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K   +   Y   ++      K S + ++L  KQK++ Y
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKILKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFY 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++       A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVGIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N  +V+I SY CK  DVI +K + K  + V +     ++  +P ++S +   +     
Sbjct: 117 LINNNTVDIPSYNCKPKDVITIKDRPKSQSIVKKNLNSFQKSKIPNHLSFDLMQVQGLVH 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|161347492|ref|NP_871570.2| 30S ribosomal protein S4 [Wigglesworthia glossinidia endosymbiont
           of Glossina brevipalpis]
 gi|152031677|sp|Q8D1Y9|RS4_WIGBR RecName: Full=30S ribosomal protein S4
          Length = 206

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 122/211 (57%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG---PGLHGQRRKSKPSYFGLQLRAKQ 56
           M+K    K K+ RR G +L+ +     + ++      PG HG  R+S+ S +G+QLR KQ
Sbjct: 1   MAKYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDHLPGQHG-SRRSRLSDYGIQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ Y  I E++F+  +K+A R +G+T  NL+  LESRLD +VYR  F  T   +RQ +
Sbjct: 60  KLRRMY-VILERQFKKYYKKAVRMKGNTGENLLILLESRLDNVVYRMGFGSTRLESRQLI 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
           +H+ +++N + +NI SY+ K  D IEVK+ +K+ + +  A +++E R+   +I V+   M
Sbjct: 119 SHKSIIINKKVINIPSYQIKPNDCIEVKEIAKKQSRIKAAIEISEQREKQSWIDVDRVKM 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F + P           +  +L++E YS+
Sbjct: 179 QGIFKKFPDRSD---LSSEINEHLIIELYSK 206


>gi|222103470|gb|ACM44264.1| small ribosomal protein subunit 4 [Drummondia sinensis]
          Length = 202

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 4   YRGPRVRIIRRLGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 60

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 61  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 119

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A + +    +++  VP +++ N         +I
Sbjct: 120 NDCIVNIPSYRCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI 179

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 180 ---LDRESIDLKINELLVVEYYSR 200


>gi|328541128|gb|AEB21788.1| ribosomal protein S4 [Telaranea chaetocarpa]
          Length = 199

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G +     K+     +Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGASPGLTSKTLKRKSNY---NDRSTLNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I+++ K K  + + +   L +   +P +++ +   +  +  +I
Sbjct: 117 NNNIVDIPSYNCEPGDLIKIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSITLCGSINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +    VVE+YSR
Sbjct: 177 INR---EWINLKINELFVVEYYSR 197


>gi|269217219|ref|ZP_06161073.1| ribosomal protein S4 [Slackia exigua ATCC 700122]
 gi|269129356|gb|EEZ60441.1| ribosomal protein S4 [Slackia exigua ATCC 700122]
          Length = 198

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 16/210 (7%)

Query: 1   MSKRESSKHKIDRRIGEN---LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57
           M+   +   K  R++G +   L    K     +          R+ K S + +QLR KQK
Sbjct: 1   MAIDRTPVLKRCRQLGIDPVVLGYSSKKESIRQPQ--------RRRKESEYAIQLREKQK 52

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
            K  YG + EK+FR  F++A R  G T  NL+  LESRLD +V+R  F  T   ARQ V 
Sbjct: 53  AKFIYGVL-EKQFRGYFRKAKRMSGITGENLMRILESRLDNVVFRLGFARTRKEARQTVT 111

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176
           H H+LVNGR V++ S+R + GD++ V  K+K L  +  A    ER  VP ++ V+ + + 
Sbjct: 112 HGHILVNGRRVDVPSFRVRPGDLVSVAPKAKDLLVIKSALVSNERVQVPAWLEVDIEKLQ 171

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + + +P+  +     + ++  L+VE YS+
Sbjct: 172 GSVLALPNRDQ---IDLDIKEQLIVELYSK 198


>gi|63191651|gb|AAY34787.1| small ribosomal protein subunit 4 [Pseudoleskeella tectorum]
          Length = 199

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|222103490|gb|ACM44274.1| small ribosomal protein subunit 4 [Aulacomnium turgidum]
          Length = 200

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    +       K S + ++L  KQK++ +YG
Sbjct: 2   YRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +   L ++  +P +++ +         +I
Sbjct: 118 NDHIVDIPSYRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLVNQI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198


>gi|328541134|gb|AEB21791.1| ribosomal protein S4 [Telaranea patentissima]
          Length = 200

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K      SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKILKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GDVI +K K K  + + +   L +   +  +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDVITIKDKQKSRSIITKNINLFQNLKIASHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|67035688|gb|AAY62775.1| small ribosomal protein subunit 4 [Pilopogon gracilis]
          Length = 199

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  + +    + +++  VP +++ N         +I
Sbjct: 117 NNYIVNIPSYRCKPEDFITIKNRQKSQSMIARNLEFSQKYKVPTHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LNHESIGLNINELLVVEYYSR 197


>gi|270300641|gb|ACZ69399.1| ribosomal protein S4 [Radula boryana]
 gi|270300643|gb|ACZ69400.1| ribosomal protein S4 [Radula gottscheana]
          Length = 202

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G+      K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGDLPGLSNKTLKPKSSY---IDRSVSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A  ++G T   L+  LE RLD  ++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNAKGSTGQILLQLLEMRLDNTIFCLGMAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N  +V+I SY C+ GD+I ++   K  + + +      + ++P ++  +   +    
Sbjct: 117 IFINNSTVDIPSYNCELGDIITIRNTHKSKSIITKNINSFRKLEIPNHLIFDSTQLRGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +      + +   LVVE+YSR
Sbjct: 177 NQ---RVPCNWISLKINELLVVEYYSR 200


>gi|146261577|gb|ABQ15098.1| ribosomal protein S4 [Penthorum sedoides]
          Length = 196

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG +
Sbjct: 1   GPRFKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG
Sbjct: 56  TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D+I  K + K  A +     L+   ++P+++++          +I  
Sbjct: 116 RIVDIPSYRCKPRDIITAKDEQKSRAMIQNYLDLSPHEELPKHLTLQPFQYKGLVNQIID 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 176 KN---WVGLKINELLVVEYYSR 194


>gi|116670828|ref|YP_831761.1| 30S ribosomal protein S4 [Arthrobacter sp. FB24]
 gi|152060932|sp|A0JX91|RS4_ARTS2 RecName: Full=30S ribosomal protein S4
 gi|116610937|gb|ABK03661.1| SSU ribosomal protein S4P [Arthrobacter sp. FB24]
          Length = 208

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+    ++   ++ R +G  L  +    +  R YGPG HG+ RK + S + ++LR KQ++
Sbjct: 1   MANNTRARRTARLSRALGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG I E +    F+EA R++G T  NLI  LE RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQYG-IREAQMTRAFEEARRTKGLTGENLIELLEMRLDALVLRAGFARTIAQARQLVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174
           RH+LV+G  V+  S+R  EG ++ V  +S+ +     A+  A RD    VP Y+ V  D 
Sbjct: 120 RHILVDGIRVDRPSFRVGEGQLVHVHSRSETMPPFQVAAAGAHRDVLPQVPAYLDVKLDA 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A  VR P   +    PV  +  LVVEFY+R
Sbjct: 180 LQARLVRRPKRSE---VPVTCEEQLVVEFYAR 208


>gi|295396094|ref|ZP_06806277.1| 30S ribosomal protein S4 [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971035|gb|EFG46927.1| 30S ribosomal protein S4 [Brevibacterium mcbrellneri ATCC 49030]
          Length = 275

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++L+ KQ+++  YG I E 
Sbjct: 78  VRLSRALGLPLTPKAEKYFERRPYPPGEHGRARRRNDSDYSIRLKEKQRLRAQYG-IREA 136

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +    +KEA +  G T   L+  LE RLD +V RA F  TI  ARQFV HRH+ V+G+ V
Sbjct: 137 QMLKTYKEARKESGLTGEALVELLEMRLDALVLRAGFARTISQARQFVVHRHICVDGQRV 196

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR KEG +I V ++S+ +     A+  A RD    VP Y++VN + + AT +R P 
Sbjct: 197 DRPSYRVKEGQMIHVHERSQPMDPFQVAAAGAHRDVLPTVPGYLNVNLEALQATLLRRPK 256

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV     LVVE YSR
Sbjct: 257 REE---IPVTCDVQLVVEHYSR 275


>gi|222103464|gb|ACM44261.1| small ribosomal protein subunit 4 [Drepanocladus aduncus]
          Length = 202

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPYRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKSQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|110456685|gb|ABG74794.1| ribosomal protein S4 [Jasminum abyssinicum]
          Length = 203

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +    + K  RR+G       KSP      G  L  + R  K S + ++L  KQK+  
Sbjct: 1   MPRYLGPRFKKIRRLGALPGLTNKSP----KAGSDLRKKPRSRKKSQYRIRLEEKQKLCF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG + + +     + A +++G T   L+  LE RLD I++R     TI AARQ V+ RH
Sbjct: 57  HYG-LRDYQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVHRRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           +LVNGR V+  SYRCK  D+I  K   K    +  +   +  +++P +++++        
Sbjct: 116 ILVNGRIVDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLHPFQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WVGLKINELLVVEYYSR 199


>gi|306819785|ref|ZP_07453440.1| 30S ribosomal protein S4 [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552154|gb|EFM40090.1| 30S ribosomal protein S4 [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 192

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 14/206 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+++   + K+ RR G N+ G PK+            G +   K S +G QL  KQK+K 
Sbjct: 1   MARQRGPRFKVARRFGVNVCGHPKALK---------RGPKPTKKMSEYGKQLLEKQKLKA 51

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY  + EK+F    ++A +S+ +    LI  LE RLD I YR  F  +I  ARQ VNH H
Sbjct: 52  YYDVL-EKQFAKYVEDALKSQENPGEKLIIRLEMRLDNIAYRLGFGSSIRQARQIVNHGH 110

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I SY+   GD I +++KS+      +    +   +P Y+  + DN     V
Sbjct: 111 LLVNGKKVDIPSYKVSVGDTITLREKSRNTQLFKDNFAASNVTLP-YLQKDIDNYSGKVV 169

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+       P+ +  +L+VE+YS+
Sbjct: 170 SLPNR---EDVPIEITESLIVEYYSK 192


>gi|156598520|gb|ABU85518.1| ribosomal protein S4 [Passiflora biflora]
          Length = 198

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KSP    ++        R  + S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRF 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 54  HYG-LTERQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  D+I VK + K    + ++     R ++P ++ +         
Sbjct: 113 ILVNNRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKKYKGLV 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LV+E+YSR
Sbjct: 173 TQIIDSK---CLGLKINELLVIEYYSR 196


>gi|49182748|gb|AAT57836.1| small ribosomal protein [Lethocolea glossophylla]
          Length = 195

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     +Y   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKAKSTY---IDHSTSNKKVSQYRIRLEEKQKLRFHYG-VTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+   E RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GDVI VK K K  + +++   L ++  VP +++ +   +     +  +  
Sbjct: 117 VDIPSYNCEPGDVITVKDKQKSQSIIIKNIDLFQKSKVPSHLTFDPTELRGLVNQTINRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---LINLKINELLVVEYYSR 193


>gi|46486542|gb|AAS98707.1| ribosomal protein subunit 4 [Rhytidiadelphus triquetrus]
 gi|80974182|gb|ABB53784.1| small ribosomal subunit protein 4 [Rhytidiadelphus triquetrus]
          Length = 199

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|328541058|gb|AEB21753.1| ribosomal protein S4 [Kurzia brevicalycina]
          Length = 200

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+      Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKTLKQKSGY---NDRSTPNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE RLD  ++R     TI  ARQ VNHRH+L+
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD I +++K K  + V +   L +   +P ++  +   +  +  + 
Sbjct: 117 NNDIVDIPSYNCEPGDTITIREKQKSQSVVTKNINLFQNLKIPSHLIFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EFIDLKINELLVVEYYSR 197


>gi|294337154|emb|CAQ52727.1| ribosomal protein S4 [Homalia pennatula]
          Length = 202

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S     +      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISQNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|163840724|ref|YP_001625129.1| 30S ribosomal protein S4 [Renibacterium salmoninarum ATCC 33209]
 gi|162954200|gb|ABY23715.1| SSU ribosomal protein S4P [Renibacterium salmoninarum ATCC 33209]
          Length = 223

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 11/209 (5%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++R     +I R +G  L  +    +  R YGPG HG+ RK + S + ++LR KQ+++  
Sbjct: 22  ARRT---VRISRALGIALTPKAAKYLERRPYGPGEHGRARKKQDSDYAVRLREKQRLRAQ 78

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG I E +   +F+EA R++G T  NL+  LE RLD +V RA F  TI  ARQ V HRH+
Sbjct: 79  YG-IREAQMTRVFEEARRTKGLTGENLVELLEMRLDALVLRAGFARTIAQARQLVVHRHI 137

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVA 177
           +V+G  V+  S+R  EG +I V  +S+ +A +  A+  A RD    VP Y+ V  + + A
Sbjct: 138 MVDGARVDRPSFRVGEGQLIHVHPRSEVMAPLQVAAAGAHRDVLPAVPGYLDVKLEGLQA 197

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             VR P   +    PV  +  LVVEFY+R
Sbjct: 198 RLVRRPKRTE---VPVTCEEQLVVEFYAR 223


>gi|328541142|gb|AEB21795.1| ribosomal protein S4 [Telaranea lawesii]
          Length = 200

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSPSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  + R    PTI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMAPTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C  GD I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCGPGDRITIRDKQKSRSIITKNVNLFQNVKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|9651819|gb|AAF91286.1|AF234158_1 ribosomal protein subunit 4 [Dicranum scoparium]
          Length = 199

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|26399116|sp|P59148|RR4_LOPST RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504355|emb|CAC81022.1| small ribosomal protein 4 [Lopidium struthiopteris]
          Length = 203

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       KS    +     ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 59  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D I +K K K  + + +  +L ++  +  +++ +        
Sbjct: 118 ILVNGYIVDIPSYRCKPQDFITIKNKQKYESIISKNIELYQKSKIANHLTYSSLEKKGLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 178 NQI---LDRESIGLKINELLVVEYYSR 201


>gi|3098186|gb|AAC15541.1| small ribosomal protein 4 [Mnium hornum]
          Length = 199

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 117 NDHLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|294337124|emb|CAQ52712.1| ribosomal protein S4 [Glossadelphus ogatae]
          Length = 202

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LV E+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVXEYYSR 200


>gi|157689468|gb|ABV65290.1| ribosomal protein S4 [Elaeocarpus angustifolius]
          Length = 195

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G G   Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTSKRP----RIGSGFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR
Sbjct: 56  ERQLLKYVRIAGKAKGSTGRILLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  K + K  A +       A  ++P++++++         +I  S
Sbjct: 116 IVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSSAHEELPKHLTLHPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLKINELLVVEYYSR 193


>gi|77862551|gb|ABB04548.1| small ribosomal protein 4 [Plagiochasma wrightii]
          Length = 201

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   ++I SY CK  D I +K + K  + + +     ++  +P +++ +  ++     
Sbjct: 117 LINNNPIDIPSYNCKPKDTITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLMHVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|26399110|sp|P59145|RR4_HYPLA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504361|emb|CAC81024.1| small ribosomal protein 4 [Hypopterygium laricinum]
          Length = 202

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +        
Sbjct: 117 ILVNGYIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LVVE+YSR
Sbjct: 177 NQILNRK---SIGLKINELLVVEYYSR 200


>gi|222103492|gb|ACM44275.1| small ribosomal protein subunit 4 [Sanionia uncinata]
          Length = 203

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 4   RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 60

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 61  G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +
Sbjct: 120 VNNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 180 I---LNRESIGLKINELLVVEYYSR 201


>gi|294337116|emb|CAQ52708.1| ribosomal protein S4 [Forsstroemia trichomitria]
          Length = 202

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPCVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|227875432|ref|ZP_03993573.1| ribosomal protein S4 [Mobiluncus mulieris ATCC 35243]
 gi|269977316|ref|ZP_06184289.1| ribosomal protein S4 [Mobiluncus mulieris 28-1]
 gi|306818743|ref|ZP_07452465.1| 30S ribosomal protein S4 [Mobiluncus mulieris ATCC 35239]
 gi|307701146|ref|ZP_07638171.1| ribosomal protein S4 [Mobiluncus mulieris FB024-16]
 gi|227843986|gb|EEJ54154.1| ribosomal protein S4 [Mobiluncus mulieris ATCC 35243]
 gi|269934619|gb|EEZ91180.1| ribosomal protein S4 [Mobiluncus mulieris 28-1]
 gi|304648429|gb|EFM45732.1| 30S ribosomal protein S4 [Mobiluncus mulieris ATCC 35239]
 gi|307614141|gb|EFN93385.1| ribosomal protein S4 [Mobiluncus mulieris FB024-16]
          Length = 206

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R     ++ R +G  L  + K     R YGPG HG+ R+   S + ++L+ KQ+++ 
Sbjct: 1   MANRSRKMVRLSRSLGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  I E +    F+EA R  G T  NLI+ LE RLD +V RA F  T+F ARQ V HRH
Sbjct: 61  QYA-IREAQLVKSFQEALRMEGRTGDNLITLLEQRLDALVLRAGFGRTMFQARQIVTHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176
           +LV+G+ V+  SYR + G  ++VK  S+     + A++ + RD    VP+Y+SV+ + + 
Sbjct: 120 ILVDGKIVDRPSYRVRPGQTVQVKPSSQVKDPFVVAARGSHRDVLPAVPDYLSVDLEKLR 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T  R+P   +    PV     LVVE+YSR
Sbjct: 180 FTLNRVPKRDE---VPVQCDVQLVVEYYSR 206


>gi|67035698|gb|AAY62780.1| small ribosomal protein subunit 4 [Dryptodon patens]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  + +++     ++  +P +++ N         +I
Sbjct: 117 NNCIVNIPSYRCKPQDFITIKDRQKSKSMIIKNMDFYQKYKIPNHLTFNSLENKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197


>gi|67035558|gb|AAY62710.1| small ribosomal protein subunit 4 [Astomiopsis kieneri]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P+   S+    +      K S + ++L  KQK++ +YG 
Sbjct: 2   RGPRVRIIRRLGILPGLTNKTPLLKSSFT---NQSTSNKKISQYRIRLEEKQKLRFHYG- 57

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNH+H+LVN
Sbjct: 58  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHKHILVN 117

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++  + +++  VP +++ N         +I 
Sbjct: 118 DRIVNIPSYRCKPQDFITIKARQKSRAMIIKNVEFSQKSKVPNHLTFNSLEKKGLINQI- 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 177 --LDQESIGLKINELLVVEYYSR 197


>gi|67035640|gb|AAY62751.1| small ribosomal protein subunit 4 [Serpotortella chenagonii]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ YYG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R +NI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I
Sbjct: 117 NNRIINIPSYRCKPQDFITIKDRQKYQAMIIKNLDFSQKTKIPNHLTFNSLEKNGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|328541066|gb|AEB21757.1| ribosomal protein S4 [Kurzia helophila]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+      Y           K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTTKTLKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T    +  LE RLD  + R     TI  ARQ VNHRH+ +N
Sbjct: 57  LTERQLLKYVRIARKAKGSTGQVSLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY C+ GD+I +++K K  + + +   L +   +P +++ +   +  +  +  
Sbjct: 117 NDIVDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSIDQTI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---ESIDLKINELLVVEYYSR 196


>gi|150251467|ref|YP_001312200.1| ribosomal protein S4 [Cycas taitungensis]
 gi|172048625|sp|A6H5H5|RR4_CYCTA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|149941517|dbj|BAF64941.1| ribosomal protein S4 [Cycas taitungensis]
          Length = 201

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P  +R+        R+    S + ++   KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLRTLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  DVI +  + +  A + +   L+++D +P +++++        
Sbjct: 116 ILVNDRVVDIPSYRCKPRDVITIIDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|63191647|gb|AAY34785.1| small ribosomal protein subunit 4 [Leskeadelphus bolivianus]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|270300653|gb|ACZ69405.1| ribosomal protein S4 [Radula grandis]
          Length = 202

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+     SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTLKPKSSY---IDRSISNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A   +G T   LI  LE RLD  ++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNMKGSTGQVLIQLLEMRLDNTIFCLGMTPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +++N  +VNI SY C+ GD+I ++ + K    +       ++ ++P +++ +   +    
Sbjct: 117 IVINNHTVNIPSYNCELGDIITIRNRHKSKLIITRNINSVQKLEIPNHLTFDATQLRGLI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +      + +   LVVE+YSR
Sbjct: 177 NQ---RIDCNSISLKINELLVVEYYSR 200


>gi|77862513|gb|ABB04529.1| small ribosomal protein 4 [Athalamia hyalina]
          Length = 200

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+      Y   ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTNKTLKLKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A +++G T   L+  LE RLD IV+R    PTI  ARQ +NH H+L
Sbjct: 58  G-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLINHPHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY CK  DVI +K + K  + + +     ++  +P +++ +   +     +
Sbjct: 117 INNNMVDIPSYNCKPKDVISIKDRPKSQSIITKNLNYFQKQKIPNHLTFDLMQVKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 177 IIDR---EWIFLKINELLVVEYYSR 198


>gi|328541172|gb|AEB21810.1| ribosomal protein S4 [Telaranea martinii]
          Length = 200

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I ++ K K  + +     L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDLITIRDKQKSRSIITRNVNLFQNLKIPSHLAFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197


>gi|328541164|gb|AEB21806.1| ribosomal protein S4 [Lepidozia bisbifida]
          Length = 198

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+     +Y           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGAPPGLTSKTLKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCEPGDIITIRDKQKSRSIIAKNVSLFQNLKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|228016849|gb|ACP51675.1| ribosomal protein S4 [Pinus attenuata]
          Length = 201

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDP----MNRSSSRKISQYRIRLEEKQKLRY 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E+      + A R++G T   L+  LE  LD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERHLLKYVRIARRAKGSTGQVLLQLLEMCLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A+  +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRANNKKNIDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|77019195|emb|CAH60203.1| chloroplast 30S ribosomal protein S4 [Grimmia pilifera]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I
Sbjct: 117 NNRIVNIASYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDHESIGLKINELLVVEYYSR 197


>gi|290968692|ref|ZP_06560230.1| ribosomal protein S4 [Megasphaera genomosp. type_1 str. 28L]
 gi|290781345|gb|EFD93935.1| ribosomal protein S4 [Megasphaera genomosp. type_1 str. 28L]
          Length = 195

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R  ++ K  RR G N++G PK+    +         +R+ K S +G QL  KQK++ 
Sbjct: 1   MATRREARFKQCRRFGLNVYGHPKALKRVKKE-------QRQKKMSEYGTQLLEKQKLRA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY ++ E++F   + +A +  G T  N++  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 54  YY-NLLERQFVRYYDKAKKMDGVTGENMLKLLECRLDNIVYRIGFANSIRQARQMVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+  +I S   K G V+ +K+ S+      ++ Q  +     YI  N D    T  
Sbjct: 113 ILVNGKRCDIPSAHVKVGSVLTLKEASRDNEMYKKSFQELKTFDVPYIEKNFDGFEGTLT 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    PV +   L+VE YS+
Sbjct: 173 RMPERDE---IPVEINETLIVELYSK 195


>gi|253729559|ref|YP_003029742.1| ribosomal protein S4 [Bambusa oldhamii]
 gi|255961385|ref|YP_003097578.1| ribosomal protein S4 [Dendrocalamus latiflorus]
 gi|246367069|gb|ACS94680.1| ribosomal protein S4 [Bambusa oldhamii]
 gi|255040262|gb|ACT99922.1| ribosomal protein S4 [Dendrocalamus latiflorus]
          Length = 201

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN R V+I S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNRRIVDIPSFRCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 176 KKILDRK---WVGLKINELLVVEYYSR 199


>gi|307683593|dbj|BAJ19775.1| ribosomal protein S4 [Larix decidua]
          Length = 201

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P     Y      +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  D I ++ + +    + +   L +RD +P +++ N        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDEITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|330850892|ref|YP_004376642.1| 30S ribosomal protein S4 [Fistulifera sp. JPCC DA0580]
 gi|328835712|dbj|BAK19008.1| 30S ribosomal protein S4 [Fistulifera sp. JPCC DA0580]
          Length = 205

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 6/208 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN-TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           MS+    K KI RR+G       K      R    G        K + +G++L  KQK+K
Sbjct: 1   MSRYRGPKLKITRRLGTLPGLTTKKSNKINRPGKDGNANADTGKKLTEYGVRLEEKQKLK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SE +     KEA R +G T   L+  LE RLDT+ +   F  T+  ARQ VNH 
Sbjct: 61  FNYG-LSESQLFRYVKEARRRQGVTGLILLQLLEMRLDTLCFTLGFAKTMAQARQLVNHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVAT 178
           H+ VN + VNI S++C+  D+I VK+++     V           +P ++  + + + AT
Sbjct: 120 HITVNKKVVNIPSFQCRLNDIISVKEQTSSKVLVENNLKDRQSNTIPAHLKFDQNKLEAT 179

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +        +   + +   LV+E YSR
Sbjct: 180 VMDYCDRDDVI---LQLDELLVIEHYSR 204


>gi|67035604|gb|AAY62733.1| small ribosomal protein subunit 4 [Campylopodium euphorocladum]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +    +++  VP +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDCITIKDRQKSQAMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIDLKINELLVVEYYSR 197


>gi|67036100|gb|AAY62976.1| small ribosomal protein subunit 4 [Rauiella lagoensis]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGDILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDYITIKNQQKSETIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63191734|gb|AAY34827.1| small ribosomal protein subunit 4 [Hedwigidium integrifolium]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKSKIPNHLTYNSLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRELIGLKINELLVVEYYSR 197


>gi|289422683|ref|ZP_06424523.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L]
 gi|289156862|gb|EFD05487.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L]
          Length = 201

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 9/202 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              K K+ RR+G N+ G PK+         G    R   K S +G+QL  KQ+++ YYG 
Sbjct: 6   RGPKFKLSRRLGLNVCGHPKAM-----NRAGKGTARSDKKLSPYGMQLLEKQRLRAYYG- 59

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           +SEK+ R   K+A +++G T   +I  LE RLD +VYR     +I  ARQ V H ++ VN
Sbjct: 60  VSEKQMRIYMKKAQKAKGPTGIAVIRTLECRLDNLVYRMGLANSIRQARQMVGHGNIHVN 119

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184
           GR VNI S+    GD I +++K +         + A  +   Y++ +  N  A   R+P 
Sbjct: 120 GRKVNIPSFIVSVGDEISLREKYRTNELFKANFEAAALNEHPYLTKDQANYSAVLTRLPE 179

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    P+ +  +LVVEFYS+
Sbjct: 180 REE---VPIEINDSLVVEFYSK 198


>gi|67035968|gb|AAY62910.1| small ribosomal protein subunit 4 [Porotrichum longirostre]
          Length = 199

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|256371242|ref|YP_003109066.1| ribosomal protein S4 [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007826|gb|ACU53393.1| ribosomal protein S4 [Acidimicrobium ferrooxidans DSM 10331]
          Length = 208

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++      ++ RR    L+ +       K P+      PG HG+ R+ +PS + +QLR 
Sbjct: 1   MARYTGPVCRLCRRERTKLFLKGPKCMSAKCPITQGRVPPGQHGRDRQRQPSEYAIQLRE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ+ ++ YG +  K+F+  +++A R  G T  NL++ LE RLD +V+RA +  +   ARQ
Sbjct: 61  KQRARRTYGVMG-KQFQRFYRDAARRSGITGENLLALLELRLDNVVFRALWGSSRAQARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            V H HVLV+G+ V+I SYR + G V+ +  K++ L  +    +   R+VP ++ V    
Sbjct: 120 LVRHGHVLVDGQRVDIPSYRLRPGQVVTLNPKARDLDIIAFNREHLTREVPAWLEVTDGG 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +P   +       ++  L+VE +S+
Sbjct: 180 SGVRVLSVPLRDQ---IDTEVREQLIVELFSK 208


>gi|37992475|gb|AAR06416.1| small ribosomal protein 4 [Cyathophorum bulbosum]
          Length = 199

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMFPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           NG  V+I SY+CK  D I +K + K  A + +  +  ++  +P +++ N+        +I
Sbjct: 117 NGSIVDIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|26399114|sp|P59147|RR4_LOPCO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504357|emb|CAC81027.1| small ribosomal protein 4 [Lopidium concinnum]
          Length = 203

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       +S    +     ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNRSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 59  HYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D I +K K K  + + +  +  ++  +  +++ +        
Sbjct: 118 ILVNGYIVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 178 NQI---LDRESIGLKINELLVVEYYSR 201


>gi|328541050|gb|AEB21749.1| ribosomal protein S4 [Chloranthelia berggrenii]
          Length = 199

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K       Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE R D  + R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I +++K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---ESIDLKINELLVVEYYSR 197


>gi|26399104|sp|P59142|RR4_HYPCP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504371|emb|CAC80630.1| small ribosomal protein 4 [Hypnum cupressiforme]
          Length = 202

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD + +R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVTFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|29422405|gb|AAO84598.1| small ribosomal protein 4 [Breutelia chrysocoma]
          Length = 200

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 2   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I
Sbjct: 118 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198


>gi|157689540|gb|ABV65326.1| ribosomal protein S4 [Plumbago auriculata]
          Length = 201

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G  L  + R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----RVGTDLRNRSRSRKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++    F+ A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 57  HYG-ITERQLLKYFRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I SYRCK  D+I  ++K    A V      +  + +P++++++        
Sbjct: 116 ILVNGRIVDIPSYRCKRQDIIMAREKKNSRALVQNYLDSSPPEKLPKHLTLHPFPHKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +     + + +   LVVE+YSR
Sbjct: 176 NQIIDNK---WFGLKINELLVVEYYSR 199


>gi|289706213|ref|ZP_06502576.1| ribosomal protein S4 [Micrococcus luteus SK58]
 gi|289557052|gb|EFD50380.1| ribosomal protein S4 [Micrococcus luteus SK58]
          Length = 208

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 11/209 (5%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++R     +  R +G  L  + +  +  R YGPG HG+ R+ + S + ++L+ KQ+++  
Sbjct: 7   TRRT---VRHSRALGIALTPKAEKYMERRPYGPGQHGRARRKQDSDYAVRLKEKQRLRAQ 63

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           Y +I E + R  F+EA R+ G T  NL+  LE RLD +V RA F  TI  ARQ V HRH+
Sbjct: 64  Y-NIREAQMRRYFEEAKRTAGLTGENLVELLEQRLDALVLRAGFARTIQQARQLVVHRHI 122

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVA 177
           LV+G+ V+I S+R KEG +I V ++S+++     A+  A + V    P Y++V  D + A
Sbjct: 123 LVDGKRVDIPSFRVKEGQMIHVHERSEKMVPFQLAAAGAHQQVLPATPGYLTVEIDKLRA 182

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T  R P   +    PV  +  LVVE+Y+R
Sbjct: 183 TLTRRPKRSE---VPVTCEEQLVVEYYAR 208


>gi|116010535|emb|CAL38871.1| ribosomal protein S4 [Shepherdia sp. IND]
          Length = 194

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  K+K++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKKP----RAGSDLRNQSRPIKKSQYRIRLEEKEKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+ VNGR 
Sbjct: 56  QQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHIFVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I VK++ K  A V      A R ++P++++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITVKEEQKSRALVQNYLDSASREELPKHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|49182740|gb|AAT57832.1| small ribosomal protein [Lepicolea ochroleuca]
          Length = 195

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKLIRRLGALPGLTSKTLKPKSSY---IDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQNLKIPSHLTFDSTKLCGSITQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWITLKINELLVVEYYSR 193


>gi|224178096|ref|YP_002600908.1| ribosomal protein S4 [Pyramimonas parkeae]
 gi|215882763|gb|ACJ71136.1| ribosomal protein S4 [Pyramimonas parkeae]
          Length = 226

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    + +I RR+GE      K  ++ +   PG HG      K S + ++LR KQK++
Sbjct: 25  MSRYRGPRLRIVRRLGELPGFTRK--LSKKENPPGQHGASLSNKKSSQYSIRLREKQKLR 82

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I+E++  +  K+A RS+G +   L+  LE RLD I++R    PT+ AARQ V+H 
Sbjct: 83  YNYG-ITERQLLNYMKKARRSKGSSGEILLKLLEMRLDNIIFRLGMAPTVLAARQLVSHG 141

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LVN  SV+I SY C+  D+I VK  SK+L          +  +PE+++     +    
Sbjct: 142 HILVNQNSVDIPSYLCRPKDIISVKASSKKLVENFLEITNID-SLPEHLTFTKSTLNGEI 200

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   LV+E+YSR
Sbjct: 201 KSIVQRS---WISLKIDELLVIEYYSR 224


>gi|331269808|ref|YP_004396300.1| 30S ribosomal protein S4 [Clostridium botulinum BKT015925]
 gi|329126358|gb|AEB76303.1| ribosomal protein S4 [Clostridium botulinum BKT015925]
          Length = 197

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+     S         R  K S +G+QL  KQK++ 
Sbjct: 1   MAKIRQPRFKLSRRLGVNIYGHPKAMKRAESTR-----ANRNKKISDYGIQLLEKQKIRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F+   ++A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH +
Sbjct: 56  YYG-VMEKQFKRYVEKAMKSKEVTGEVLLKLLECRLDNIVYRIGFANSIRQARQMVNHGY 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
           +LVNG+ V+I SY+ K GD++++K K        +   +L   ++P YI  N+D+     
Sbjct: 115 ILVNGKKVDIPSYQVKVGDIVKLKDKYTNNQMFSDNFLELRTFELP-YIEKNYDDFSGKL 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +R+P   +    P+ +    VVE YS+
Sbjct: 174 LRLPERDE---LPIEVNEVAVVELYSK 197


>gi|67035761|gb|AAY62811.1| small ribosomal protein subunit 4 [Sehnemobryum paraguense]
          Length = 201

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+P    S     +      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVKIIRRLGVLPGLTNKTPQLKSSPA---NQSTSNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++
Sbjct: 59  G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTISGARQLVNHRHII 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K    + +     ++  +P +++ N         +
Sbjct: 118 VNNRIVNIPSYRCKPQDFITIKNRQKSQDIITKNINFNQKYKIPNHLTYNSLEKKGFVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 178 I---LDRELINLKINELLVVEYYSR 199


>gi|293363785|ref|ZP_06610526.1| ribosomal protein S4 [Mycoplasma alligatoris A21JP2]
 gi|292552651|gb|EFF41420.1| ribosomal protein S4 [Mycoplasma alligatoris A21JP2]
          Length = 199

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++      K  RR+G ++    K  +    R+Y PG HG +R  K S +GL L  KQK+
Sbjct: 1   MARYTGPVFKKSRRLGYSILETGKEFAKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  +G +SEK+ R  + +A + +G T  NL+  LESRLD +VYRA F  T   ARQ VNH
Sbjct: 60  KYVFG-VSEKQLRKAYVKATKLKGITGTNLLQVLESRLDNLVYRAGFAQTRRQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H LV+G+  +I S   K G V+ +K+  K   +V     LA +    +++    +    
Sbjct: 119 NHFLVDGKKADIPSMSIKLGSVVTLKE--KTQKNVQVTDALANKPAAAWLT--RKDFTVK 174

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F R+P   +     V ++  L+VE+Y++
Sbjct: 175 FDRLPERNE---MHVEIKDALIVEYYAK 199


>gi|49182724|gb|AAT57824.1| small ribosomal protein [Herzogobryum teres]
          Length = 195

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G +     K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGASPGLTSKTLKSKSSY---IDRSASNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+ VN  +
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMTPTIPGARQLVNHGHISVNNDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ + +  +++ +   L ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNRQRSQSTITKNLNLFQKSKIPSHLTFDLTQLQGSVNQMVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|63191649|gb|AAY34786.1| small ribosomal protein subunit 4 [Lindbergia brachyptera]
          Length = 199

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|11878079|gb|AAG40787.1| small ribosomal protein 4 [Buxbaumia aphylla]
          Length = 200

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P     Y    +      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++     + A  ++G T   L+   E RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLKYVRIARGAKGSTGQILLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SYRCK  D I +K   K    + +  +L+++  +P +++ N         +
Sbjct: 117 VNNNIVNIPSYRCKPQDFITIKNSQKSQTIITKNIELSQKYKIPNHLTFNSLEKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|12642228|gb|AAK00196.1| rps4 [Physcomitrella patens]
          Length = 194

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S       Q    K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   
Sbjct: 56  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I VK + K  A + +    +++  VP +++ +         +I   L
Sbjct: 116 VDIPSYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---L 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 DRESIGLKINELLVVEYYSR 192


>gi|108759189|ref|YP_634922.1| 30S ribosomal protein S4 [Myxococcus xanthus DK 1622]
 gi|122980658|sp|Q1CXF1|RS4B_MYXXD RecName: Full=30S ribosomal protein S4 B
 gi|108463069|gb|ABF88254.1| ribosomal protein S4 [Myxococcus xanthus DK 1622]
          Length = 210

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 10/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    + K+ RR+G  L         K PV  R Y PG HG   ++  S F  +LR K
Sbjct: 1   MARDLGPRGKMCRRLGIPLSRITAKDPDKDPVLRRPYPPGQHGATARTSVSDFARRLREK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K YYG + EK+ R++F+EA R+ G+T   L+  LESRLD++V RA    +I  ARQF
Sbjct: 61  QKLKLYYG-LMEKQCRAVFQEASRAPGNTGTVLLQLLESRLDSLVLRAGLATSIRQARQF 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDN 174
           V H ++ V+G+  +I S+R K G  +      ++LA V E+ S++  R VP Y+ V  + 
Sbjct: 120 VRHGYLHVDGKRADIPSFRVKPGSEVRFHAAHQKLAVVQESFSRMKSRSVPAYVQVLGEG 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
               +VR+P   +    PV +    +VE+Y
Sbjct: 180 EGLRYVRLPEREE---IPVDVNEPFIVEYY 206


>gi|108773272|ref|YP_635720.1| ribosomal protein S4 [Chara vulgaris]
 gi|122231313|sp|Q1ACM7|RR4_CHAVU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|77157928|gb|ABA61969.1| ribosomal protein S4 [Chara vulgaris]
          Length = 206

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPS--YFGLQLRAKQKM 58
           MS+    + KI RR+G  L G  +    ++S   G       S      + ++L  KQK+
Sbjct: 1   MSRYRGPRLKIVRRLG-PLPGFTQKLYKSKSQYLGSSTTSSSSNKKISQYNIRLLEKQKL 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + YYG ++E++       A  ++G T   L+  LE RLD IV+R    PTI AARQ VNH
Sbjct: 60  RFYYG-LTERQLLKYVTIARNAKGPTGQVLLQLLEMRLDNIVFRLGMAPTIPAARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNMVA 177
           RH+LVN  +VNI SY CK GD I V+++ +   ++   ++Q A   VP ++++N      
Sbjct: 119 RHILVNDFTVNIPSYSCKLGDKISVQKRFESKTNIFANSTQSASLKVPSHLTLNPAKNEG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I            +   LVVE+YSR
Sbjct: 179 LVHQIVDR---EFIGAKINELLVVEYYSR 204


>gi|67036112|gb|AAY62982.1| small ribosomal protein subunit 4 [Mittenothamnium reptans]
          Length = 199

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E+RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLXLPETRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQQKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|225076419|ref|ZP_03719618.1| hypothetical protein NEIFLAOT_01464 [Neisseria flavescens
           NRL30031/H210]
 gi|224952267|gb|EEG33476.1| hypothetical protein NEIFLAOT_01464 [Neisseria flavescens
           NRL30031/H210]
          Length = 173

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 6/175 (3%)

Query: 33  GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92
            PG HG  +K + S +GLQLR KQK+++ YG + E++FR  F EA R +G T   L+  L
Sbjct: 4   APGQHGA-KKPRLSDYGLQLREKQKIRRIYGVL-ERQFRRYFAEAARRKGSTGELLLQLL 61

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           ESRLD +VYR  F  T   ARQ V+H+ ++VNG+ VNI S++ K GDV+ V++K+K+   
Sbjct: 62  ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVAVREKAKKQVR 121

Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + EA  LA +  +P ++SV+ D +   F  +P   +       +   LVVEFYS+
Sbjct: 122 IQEALSLATQIGLPSWVSVDADKLEGVFKNMPDRSE---LSGDINEQLVVEFYSK 173


>gi|78369625|gb|ABB43042.1| ribosomal protein 4 [Calymperes schmidtii]
          Length = 199

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRLKIIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY+CK  + I +K + K    +++    + +  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYQCKPQEFITIKNQQKYQTMIIKNENFSPKYKIPSHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|3098198|gb|AAC15547.1| small ribosomal protein 4 [Leptobryum pyriforme]
          Length = 199

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFIIIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|222103536|gb|ACM44297.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum]
          Length = 202

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 4   YRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 60

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 61  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 119

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K +      + +     ++  +P +++ N  N      +I
Sbjct: 120 NDRLVDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI 179

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 180 LDRD---SIDLKINELLVVEYYSR 200


>gi|49182700|gb|AAT57812.1| small ribosomal protein [Diplophyllum albicans]
          Length = 195

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNNT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPNHLTFDLTQLQGSVNQMVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|311894846|dbj|BAJ27254.1| putative ribosomal protein S4 [Kitasatospora setae KM-6054]
          Length = 204

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 106/209 (50%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ ++  K KI R +G  L  +       R Y PG HG+ RK     + ++L  KQ+++ 
Sbjct: 1   MANQKRPKVKIARALGVPLTPKSVKYFEARPYPPGQHGRGRKQNS-DYKVRLTEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SEK+    F+ A +  G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-LSEKQMARAFEAAKKIEGKTGEALVGLLEVRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG  VN  S++ K G V+ VK+KSK+      A +     E   P+Y+ VN   +  
Sbjct: 119 IEVNGAKVNKPSFQLKPGYVVTVKEKSKEKVPFQVAREGGNAGEGQTPKYLEVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P   +    PV+    LVVE+YSR
Sbjct: 179 RLDRAPQRRE---VPVVCDEQLVVEYYSR 204


>gi|284799892|ref|ZP_05985156.2| ribosomal protein S4 [Neisseria subflava NJ9703]
 gi|284796551|gb|EFC51898.1| ribosomal protein S4 [Neisseria subflava NJ9703]
          Length = 173

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/175 (42%), Positives = 109/175 (62%), Gaps = 6/175 (3%)

Query: 33  GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92
            PG HG  +K + S +GLQLR KQK+++ YG + E++FR  F EADR +G T   L+  L
Sbjct: 4   APGQHGA-KKPRLSDYGLQLREKQKIRRIYGVL-ERQFRRYFAEADRRKGSTGELLLQLL 61

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           ESRLD +VYR  F  T   ARQ V+H+ ++VNG+ VNI S++ K GDV+ V++K+K+   
Sbjct: 62  ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVAVREKAKKQVR 121

Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + EA  LA +  +P ++SV+ D +   F  +P   +       +   LVVEFYS+
Sbjct: 122 IQEALSLATQIGLPSWVSVDADKLEGVFKNMPDRSE---LSGDINEQLVVEFYSK 173


>gi|49182815|gb|AAT57869.1| small ribosomal protein [Trichocolea tomentosa]
          Length = 195

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNEI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD I ++ K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDTITIRNKQKSQSMITKNINLFQKLKIPSHLTFDLTQLQGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|283458017|ref|YP_003362625.1| 30S ribosomal protein S4 [Rothia mucilaginosa DY-18]
 gi|283134040|dbj|BAI64805.1| ribosomal protein S4 [Rothia mucilaginosa DY-18]
          Length = 210

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 10/212 (4%)

Query: 1   MSK--RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K  R     +  R +G  L  + +  +  R YGPG HG+ RK   S +  QL+ KQ++
Sbjct: 1   MAKHNRTRRTVRQSRALGIALTPKAEKYLERRPYGPGQHGRARKKADSNYATQLKEKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y +I E + R  + EA R+ G T  N++  LE+RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQY-NIREAQMRRAYLEAKRTEGQTGKNMVELLETRLDALVLRAGFARTIAQARQMVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYISVNHDN 174
           RH++V+G  V+  S+  K G +I V  K+++ A    A+    +    +VP Y++V  + 
Sbjct: 120 RHIMVDGVRVDRPSFHVKPGQLIHVHPKAEKTAPFQAAAAGEHQAVLPEVPAYLNVEIEK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A   R P   +    PVI    LVVE+YSR
Sbjct: 180 LHAKLERKPKREE---IPVICDEQLVVEYYSR 208


>gi|157689538|gb|ABV65325.1| ribosomal protein S4 [Phyllanthus calycinus]
          Length = 195

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGTLPGLTSKKP----RAGSDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH+H+LVNGR
Sbjct: 56  ERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHKHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  K + K  A +      + ++++P +++++  +      +I  S
Sbjct: 116 IVDIPSYRCKPRDIITAKNEQKSRAMIQNYLDSSPQQELPNHLTLHSIHYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLKINELLVVEYYSR 193


>gi|46947049|gb|AAT06757.1| ribosomal protein subunit 4 [Dendro-hypnum subspininervium]
          Length = 200

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G  L    K+     S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +
Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   L+VE+YSR
Sbjct: 177 I---LDRESIGLKINELLIVEYYSR 198


>gi|328541168|gb|AEB21808.1| ribosomal protein S4 [Telaranea lindenbergii]
          Length = 197

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNVKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|322719527|gb|ADX07700.1| small ribosomal protein subunit 4 [Bucklandiella sudetica]
          Length = 198

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++  + +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIEFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|110456762|gb|ABG74849.1| ribosomal protein S4 [Menodora longiflora]
          Length = 213

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 11/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSY----GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M +    + K  RR+G       K P   +S     G G   Q R  K S + ++L  KQ
Sbjct: 1   MPRYRGPRLKKIRRLGALPGLTNKRPKRPKSPNDKDGSGRRKQTRSRKKSQYRIRLEEKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+  +YG + E +     + A +++G T   L+  LE RLD I++R     TI AARQ V
Sbjct: 61  KLCFHYG-LREYQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHD 173
           NH H+LVNGR V+  SYRCK  D+I  K   K    +  +  L+   ++ +P ++++   
Sbjct: 120 NHSHILVNGRIVDRSSYRCKPQDIILTKDTQKSRTLIQNSLTLSFLKKKKLPFHLTLQPS 179

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   I  S +     + +   LVVE+YSR
Sbjct: 180 QYKGLVKEIVDSKR---VGLKINELLVVEYYSR 209


>gi|146261545|gb|ABQ15082.1| ribosomal protein S4 [Paeonia brownii]
          Length = 196

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG +
Sbjct: 1   GPRFKKIRRLGALPGLTSKRP----RATGDLRNQLRSGKRSQYRIRLEEKQKLRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  +E RLD I++R     TI  ARQ VNHRH+LVNG
Sbjct: 56  TERQLLKYVRIAGKAKGSTGQVLLQLIEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D+I  K + +  A +     L+   ++P++++++         +I  
Sbjct: 116 RIVDIPSYRCKPQDIITAKDEKQSRALIQNYLDLSPHAELPKHLTLHPFEYKGLVNQIID 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           S       + +   LVVE+YSR
Sbjct: 176 SK---WVSLQINELLVVEYYSR 194


>gi|46811044|gb|AAT01840.1| small ribosomal protein 4 [Porella navicularis]
          Length = 197

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRLKIIRRLGALPGFTAKTLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+  LE RLD  ++      TI  ARQ VNH+H+ +N 
Sbjct: 57  TERQLLKYVRTARNAKGSTGQILLQLLEMRLDNTIFCLGMASTIPGARQLVNHKHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +V+I SY C+ GD+I ++ + K  + +     L ++ ++P +++ +   +  +  ++ +
Sbjct: 117 DTVDIPSYNCEPGDIITIRNREKSQSIITRNINLFQKLEIPNHLTFDSTQLRGSVNQMIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKVNELLVVEYYSR 195


>gi|67035690|gb|AAY62776.1| small ribosomal protein subunit 4 [Ochrobryum gardneri]
          Length = 199

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  + + +  + +++  VP +++ N         +I
Sbjct: 117 NNYIVNIPSYRCKPQDFITIKNRQKSQSIIAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L +    + +   LVVE+YSR
Sbjct: 177 ---LNNESIGLKINELLVVEYYSR 197


>gi|86438872|emb|CAJ55416.1| small ribosomal protein 4 [Plagiochila acanthocaulis]
          Length = 196

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCELGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVE 202
            ++ +        + +   LVVE
Sbjct: 177 NQMINR---EWINLKINELLVVE 196


>gi|157689452|gb|ABV65282.1| ribosomal protein S4 [Coriaria nepalensis]
          Length = 195

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG I+
Sbjct: 1   PRFKKIRRLGALPGLTSKRP----RTGSDLKNQPRSGKKSQYRIRLEEKQKLRFHYG-IT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG 
Sbjct: 56  ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGC 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  K + K    +      +   ++P++++++         +I  S
Sbjct: 116 IVDIPSYRCKPRDIITAKDEQKSRTLIQNYLDSSPHEELPKHLTLHPVQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLKINELLVVEYYSR 193


>gi|119029437|gb|ABL59934.1| ribosomal protein S4 [uncultured bacterium]
          Length = 210

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 14/215 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWG----RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    + +++RR   +L       P+      +  PG HG  R+SK S +G Q RAKQ
Sbjct: 1   MARDLGPRGRLERREQHDLSLFSGVSPRDNKIKTAVVPGQHG-TRRSKLSDYGKQFRAKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
             K+ YG + E++FR+ F+ A +  G T  NL+  LE RLD IVYR+ F  T   ARQ V
Sbjct: 60  LAKRIYGVL-ERQFRNYFRYASKRNGPTGENLLRLLECRLDNIVYRSGFARTRKEARQLV 118

Query: 117 NHRHVLVNG----RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVN 171
           +H+ ++VN     R VNI SY+ K  D I V++K +    V EA  LA+ R  PE+I  +
Sbjct: 119 SHKGIVVNDGKNIRVVNIPSYQIKPEDEIFVREKCRDQGRVREALDLAQKRTTPEWIETD 178

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           H N      R+P   +    P+ +   L+VE YS+
Sbjct: 179 HLNFKGVIKRLPERDE---MPLEIAELLIVELYSK 210


>gi|320103641|ref|YP_004179232.1| 30S ribosomal protein S4P [Isosphaera pallida ATCC 43644]
 gi|319750923|gb|ADV62683.1| SSU ribosomal protein S4P [Isosphaera pallida ATCC 43644]
          Length = 209

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 13/214 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M +      ++ RR G  L+ +      PK  +  R   PG+H Q R+ K S +  +LR 
Sbjct: 1   MGRYTGPVCRLCRREGIKLYLKGTRCDSPKCAIERRQTVPGMH-QTRRGKASEYAKRLRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+YYG + E++FR  + EA+R  G+T   L++ LE RLD +V R  F  +   ARQ
Sbjct: 60  KQKVKRYYG-VYERQFRKYYAEANRLPGNTGERLMALLERRLDNVVTRLGFAISRPQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYIS-VNH 172
            ++H H+LVNGR ++I SY  + G+ I +K +        +   Q     VP+++  ++ 
Sbjct: 119 LISHGHILVNGRKLDIPSYLVRAGESITLKDREHSRRVTSDNLHQENLPAVPDWLERISE 178

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           D       R+PS  +D+  PV  QP L+VE  SR
Sbjct: 179 DPPEGRVSRLPS-AQDISLPV--QPQLIVELLSR 209


>gi|46810994|gb|AAT01815.1| small ribosomal protein 4 [Blasia pusilla]
          Length = 197

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K   +   Y   L+      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +V+I SY CK  D+I +K + K  + + +     ++  +P +++ +         +I  
Sbjct: 117 INVDIPSYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQIID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|118626119|emb|CAL39359.1| small ribosomal protein 4 [Odontoschisma denudatum]
          Length = 202

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY           K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSYSD---RSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  V+R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   ++I SY  K GD+I +K K K  + + +   L ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIIDIPSYDRKPGDIITIKDKQKSRSIITKNVNLFQKFKIPSHLTFDLTQLQGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I +        + +   LVVE+YSR
Sbjct: 177 NQIVNR---EWVNLKINELLVVEYYSR 200


>gi|67035797|gb|AAY62829.1| small ribosomal protein subunit 4 [Orthostichopsis tetragona]
          Length = 199

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NHCIVDIPSYRCKPHDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67036082|gb|AAY62967.1| small ribosomal protein subunit 4 [Rigodium toxarion]
          Length = 199

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|146261561|gb|ABQ15090.1| ribosomal protein S4 [Exbucklandia populnea]
          Length = 195

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR
Sbjct: 56  ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  + + K  A +      +   ++P++++++         +I  S
Sbjct: 116 IVDIPSYRCKPRDIITARDEQKSRALIQNYIDSSPHEELPKHLTLHPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLKINELLVVEYYSR 193


>gi|116010499|emb|CAL37356.1| ribosomal protein S4 [Buddleja davidii]
          Length = 194

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   +VP +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRTLIQNSLNSSPHEEVPNHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|328541140|gb|AEB21794.1| ribosomal protein S4 [Telaranea palmata]
          Length = 200

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G       K      +Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGAPPGLTSKILKPKANY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+L+
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GDVI +K K +  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCESGDVITIKDKQRSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|322719533|gb|ADX07703.1| small ribosomal protein subunit 4 [Grimmia pilifera]
 gi|322719535|gb|ADX07704.1| small ribosomal protein subunit 4 [Grimmia pilifera]
 gi|322719537|gb|ADX07705.1| small ribosomal protein subunit 4 [Grimmia pilifera]
 gi|322719539|gb|ADX07706.1| small ribosomal protein subunit 4 [Grimmia pilifera]
 gi|322719541|gb|ADX07707.1| small ribosomal protein subunit 4 [Grimmia pilifera]
          Length = 198

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|46811000|gb|AAT01818.1| small ribosomal protein 4 [Diplophyllum obtusifolium]
          Length = 197

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI  R+G       K+  +  SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIYVRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHISVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +V+I SY C+ GD+I V  K K  + + +   L ++  +P +++ +   +  +  ++ +
Sbjct: 117 ATVDIPSYNCEPGDIITVVSKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSVNQMVN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWVNLKINELLVVEYYSR 195


>gi|167748456|ref|ZP_02420583.1| hypothetical protein ANACAC_03200 [Anaerostipes caccae DSM 14662]
 gi|317472011|ref|ZP_07931343.1| ribosomal protein S4 [Anaerostipes sp. 3_2_56FAA]
 gi|167652448|gb|EDR96577.1| hypothetical protein ANACAC_03200 [Anaerostipes caccae DSM 14662]
 gi|316900415|gb|EFV22397.1| ribosomal protein S4 [Anaerostipes sp. 3_2_56FAA]
          Length = 197

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R +G +        ++ +S      G R+KS+   +GLQLR KQK K 
Sbjct: 1   MAIDRTPVLKRCRSLGLDPVFLG---IDKKSNRTSTRGNRKKSE---YGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A++ +G T  NL++ LE RLD +++R  F  T    RQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKAEKMKGQTGVNLMTLLELRLDNVLFRLGFGRTRKECRQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG++VNI SYR   GDVIE+K+  K      E  +    R VP ++  N + +  T 
Sbjct: 114 VLVNGKTVNIPSYRVSVGDVIEIKENHKTSPRYKEILEVTGGRMVPSWLEANQEALSGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KELPAREE---IDVPVNETLIVELYSK 197


>gi|157689510|gb|ABV65311.1| ribosomal protein S4 [Leea guineensis]
          Length = 193

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       KSP      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKSP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLNYVRIAGKAKGATGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  + + K  A +      +   ++P++++++         +I  S  
Sbjct: 116 DIPSYRCKPRDIITARDEQKSRALIQNFLDSSSHEELPKHLTLHPFQFKGVVNQIIDSN- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVGLKINELLVVEYYSR 191


>gi|46811026|gb|AAT01831.1| small ribosomal protein 4 [Lepicolea attenuata]
          Length = 197

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+        K+     SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKLIRRLXAXPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 DIVDIPSYNCEPGDIITIRNKEKSQSIITKNINLFQNLKIPSHLTFDSTKLRGSITQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWITLKINELLVVEYYSR 195


>gi|297562093|ref|YP_003681067.1| ribosomal protein S4 [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296846541|gb|ADH68561.1| ribosomal protein S4 [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 203

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    K ++ RR G  L  +  S    R Y PG HG+R +   S + ++   KQK++ YY
Sbjct: 2   RYTGPKVRLSRRAGTPLTRKAVSYFEKRPYPPGEHGRRVRRNSSDYAVRQAEKQKVRWYY 61

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
             ++EK+   +++ A +  G T   +++ LE RL T+V RA    +I+AARQFVNH H+ 
Sbjct: 62  D-LTEKQMLRVYESAKKRTGRTGEEMLAELELRLATVVLRAGLAASIYAARQFVNHGHIT 120

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFV 180
           V+G+ V+I SY+ K G +I V++KS+ +   +EA++   A+  +  +++V+H ++    V
Sbjct: 121 VDGKKVDIPSYQVKPGQIISVREKSRNMVPFVEAAEGVHADDKIAGFLAVSHKDLR---V 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    K    PV     LVVEFY+R
Sbjct: 178 AVVDRPKREQIPVPFDEQLVVEFYAR 203


>gi|77862549|gb|ABB04547.1| small ribosomal protein 4 [Plagiochasma rupestre]
          Length = 201

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLSMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   ++I SY CK  D I +K + K  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNPIDIPSYNCKPKDTITIKDRPKSKSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 177 QIIDR---EWIYLKINELLVVEYYSR 199


>gi|237688697|ref|YP_002905313.1| ribosomal protein S4 [Pinus krempfii]
 gi|226951154|gb|ACO94217.1| ribosomal protein S4 [Pinus krempfii]
          Length = 203

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 7/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDSM--SMNRSSSRKISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + + R++G TS  L+  LE RL+ I++R    PTI  ARQ VNH H
Sbjct: 59  HYG-LTERQLLKYVRVSRRAKGSTSQVLLQLLEMRLNNILFRLGMAPTIPGARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 118 IRVNDHMVDIPSYPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFI 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 178 NQIIDSK---WISLKINELLVVEYYSR 201


>gi|257457760|ref|ZP_05622921.1| ribosomal protein S4 [Treponema vincentii ATCC 35580]
 gi|257444810|gb|EEV19892.1| ribosomal protein S4 [Treponema vincentii ATCC 35580]
          Length = 204

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQK 57
           M+     K K+ RR G N++G PK    ++ +   PG   G +++ K S +G QL+ KQK
Sbjct: 1   MAT-RQPKGKLVRRFGSNIFGNPKYSKLLDRKPNAPGKERGAKQRGKLSVYGEQLKEKQK 59

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
            +  YG +SE++F ++F++A +  G T  N++S +E RLD  +YR  F  +   ARQ V+
Sbjct: 60  FRFAYG-MSERQFSNLFQKALKMSGVTGDNMLSLMEQRLDNTIYRMGFAVSRAQARQMVS 118

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H + L+NG+  NI S R K GDVI  K K      +       +     ++SVN +N+ A
Sbjct: 119 HAYFLLNGKPANIPSMRVKVGDVITTKDKKGFQNLIRHNLSTVQGGKGSWLSVNDENLSA 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T   +P+     P         VVEFYSR
Sbjct: 179 TVTTLPTPADIQPVG---NIQYVVEFYSR 204


>gi|124302908|ref|YP_001023703.1| ribosomal protein S4 [Angiopteris evecta]
 gi|152060544|sp|A2T335|RR4_ANGEV RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|110628306|gb|ABG79602.1| ribosomal protein S4 [Angiopteris evecta]
          Length = 206

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 10/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+ +      K+  + ++       Q    K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +G ++E++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH
Sbjct: 59  NHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMV 176
           +LVN R V+I SYRCK  D+I V+ ++     V +  +   +D +PE+++ +    +   
Sbjct: 118 ILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQ 177

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               RI +        + +   LVVE+YSR
Sbjct: 178 GFVNRIVTRD---SIGLDINELLVVEYYSR 204


>gi|222103500|gb|ACM44279.1| small ribosomal protein subunit 4 [Anomodon minor]
          Length = 204

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 6   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 62

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 63  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 121

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 122 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 181

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 182 ---LDRESIGLKINELLVVEYYSR 202


>gi|322719491|gb|ADX07682.1| small ribosomal protein subunit 4 [Niphotrichum japonicum]
 gi|322719493|gb|ADX07683.1| small ribosomal protein subunit 4 [Niphotrichum japonicum]
 gi|322719495|gb|ADX07684.1| small ribosomal protein subunit 4 [Niphotrichum japonicum]
 gi|322719497|gb|ADX07685.1| small ribosomal protein subunit 4 [Niphotrichum japonicum]
 gi|322719499|gb|ADX07686.1| small ribosomal protein subunit 4 [Niphotrichum japonicum]
 gi|322719501|gb|ADX07687.1| small ribosomal protein subunit 4 [Niphotrichum japonicum]
 gi|322719529|gb|ADX07701.1| small ribosomal protein subunit 4 [Racomitrium lanuginosum]
 gi|322719531|gb|ADX07702.1| small ribosomal protein subunit 4 [Racomitrium lanuginosum]
          Length = 198

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|3098180|gb|AAC15538.1| small ribosomal protein 4 [Mielichhoferia elongata]
          Length = 199

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQSLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|270300681|gb|ACZ69419.1| ribosomal protein S4 [Radula complanata]
 gi|270300683|gb|ACZ69420.1| ribosomal protein S4 [Radula complanata]
 gi|270300685|gb|ACZ69421.1| ribosomal protein S4 [Radula complanata]
          Length = 202

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
            ++N  +VNI SY C+ GD+I V+ + K  + + +   L ++ ++P +++ +   +  + 
Sbjct: 117 FVINNFTVNIPSYNCELGDIITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDYNSINFKINELLVVEYYSR 200


>gi|63191691|gb|AAY34807.1| small ribosomal protein subunit 4 [Pterogonium gracile]
          Length = 199

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|14276326|gb|AAK58201.1| small ribosomal protein 4 [Bartramia halleriana]
          Length = 199

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63191859|gb|AAY34889.1| small ribosomal protein subunit 4 [Pseudosymblepharis
           guatemalensis]
          Length = 199

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKTPHLKSNST---NQSNSTKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQELIGLKINELLVVEYYSR 197


>gi|255327167|ref|ZP_05368242.1| ribosomal protein S4 [Rothia mucilaginosa ATCC 25296]
 gi|255295785|gb|EET75127.1| ribosomal protein S4 [Rothia mucilaginosa ATCC 25296]
          Length = 210

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 10/212 (4%)

Query: 1   MSK--RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K  R     +  R +G  L  + +  +  R YGPG HG+ RK   S +  QL+ KQ++
Sbjct: 1   MAKHNRTRRTVRQSRALGIALTPKAEKYLERRPYGPGQHGRARKKADSNYATQLKEKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y +I E + R  + EA R+ G T  N++  LE+RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQY-NIREAQMRRAYLEAKRTEGQTGKNMVELLETRLDALVLRAGFARTIAQARQMVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYISVNHDN 174
           RH++V+G  V+  S+  K G +I V  K+++      A+    +    +VP Y++V  + 
Sbjct: 120 RHIMVDGVRVDRPSFHVKPGQLIHVHPKAEKTTPFQAAAAGENQAVLPEVPAYLNVEIEK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A   R P   +    PVI    LVVE+YSR
Sbjct: 180 LHAKLERKPKREE---IPVICDEQLVVEYYSR 208


>gi|322719509|gb|ADX07691.1| small ribosomal protein subunit 4 [Codriophorus fascicularis]
          Length = 198

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNISFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|322719503|gb|ADX07688.1| small ribosomal protein subunit 4 [Niphotrichum canescens]
          Length = 198

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L +    + +   LVVE+YSR
Sbjct: 176 --LDNESIGLKINELLVVEYYSR 196


>gi|322719505|gb|ADX07689.1| small ribosomal protein subunit 4 [Niphotrichum elongatum]
          Length = 198

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGVLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|116010507|emb|CAL37360.1| ribosomal protein S4 [Fraxinus excelsior]
          Length = 194

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +  L+   ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDLSPHEELPNHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|46811020|gb|AAT01828.1| small ribosomal protein 4 [Isotachis multiceps]
          Length = 197

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD I V+ + K  + + +   L     +P +++ +   +     +  +
Sbjct: 117 DIVDIPSYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFVNQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---ELINLKINELLVVEYYSR 195


>gi|269839290|ref|YP_003323982.1| ribosomal protein S4 [Thermobaculum terrenum ATCC BAA-798]
 gi|269791020|gb|ACZ43160.1| ribosomal protein S4 [Thermobaculum terrenum ATCC BAA-798]
          Length = 201

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTR-SYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M K+   +HK+ RR G +++G     +  R    PG     R+ + S +G+QL  KQK K
Sbjct: 1   MVKKREPRHKVSRRFGVDIYGTGGDSLQRRLHIPPGGFKGGRRRRLSEYGMQLFEKQKAK 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG + E++F+  +++A+R  G+T HNL+  +E RLD +VYR  F  T   ARQ V H 
Sbjct: 61  AYYG-VHERQFQRYYQQAERMPGNTGHNLLQLIERRLDNVVYRLGFARTRPMARQLVVHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV VNG+ V+  SY+ K G+VI + +K+ Q+  V+E  + + R VP ++    +  V   
Sbjct: 120 HVRVNGQKVDRPSYQVKPGEVITLTEKALQIPVVIEEME-SHRIVPAWLQ--REGPVGRV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P   +    P  +  +L++ FYSR
Sbjct: 177 VRLPERDE---IPEPINEDLIIAFYSR 200


>gi|226228207|ref|YP_002762313.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27]
 gi|226091398|dbj|BAH39843.1| 30S ribosomal protein S4 [Gemmatimonas aurantiaca T-27]
          Length = 205

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR--RKSKPSYFGLQLRAKQKM 58
           MS+    + KI RR+G  L G        R Y PG HGQ   R+ K S + L+L AKQ +
Sbjct: 1   MSR-VGPRLKIIRRLGIQLPGLTAKDAERRPYPPGQHGQSTARRRKVSLYRLRLEAKQAL 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + YYG ISE + R  +  A    G T   +++ LE+RLD +V+R  F  TI AARQ V H
Sbjct: 60  RFYYG-ISENQLRRTYAMAKTRPGRTGDVMLAMLEARLDNVVFRLGFARTIPAARQLVVH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISV-NHDNMV 176
            HV VNG  V+   YR + G++I++  +  +   V E  Q   +  +P +++  +   + 
Sbjct: 119 GHVYVNGSRVDRPGYRLRTGEMIKLDPRMAENPHVQEQLQRGPQVKLPGWLAKTDDAPLE 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +  P+       P       +VE+Y+R
Sbjct: 179 GRMIAPPTR---ESVPFACNDAAIVEYYAR 205


>gi|328541166|gb|AEB21807.1| ribosomal protein S4 [Telaranea tetradactyla]
          Length = 197

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSASNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNVKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|239917776|ref|YP_002957334.1| SSU ribosomal protein S4P [Micrococcus luteus NCTC 2665]
 gi|281413731|ref|ZP_06245473.1| 30S ribosomal protein S4 [Micrococcus luteus NCTC 2665]
 gi|259495286|sp|C5CCG8|RS4_MICLC RecName: Full=30S ribosomal protein S4
 gi|239838983|gb|ACS30780.1| SSU ribosomal protein S4P [Micrococcus luteus NCTC 2665]
          Length = 208

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 121/209 (57%), Gaps = 11/209 (5%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++R     +  R +G  L  + +  +  R YGPG HG+ R+ + S + ++L+ KQ+++  
Sbjct: 7   TRRT---VRHSRALGIALTPKAEKYMERRPYGPGQHGRARRKQDSDYAVRLKEKQRLRAQ 63

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           Y +I E + R  F+EA R+ G T  NL+  LE RLD +V RA F  TI  ARQ V HRH+
Sbjct: 64  Y-NIREAQMRRYFEEAKRTAGLTGENLVELLEQRLDALVLRAGFARTIQQARQLVVHRHI 122

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVA 177
           +V+G+ V++ S+R KEG +I V ++S+++     A+  A + V    P Y++V  + + A
Sbjct: 123 MVDGKRVDVPSFRVKEGQMIHVHERSEKMVPFQLAAAGAHQQVLPATPGYLTVEIEKLRA 182

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T  R P   +    PV  +  LVVE+Y+R
Sbjct: 183 TLTRRPKRSE---VPVTCEEQLVVEYYAR 208


>gi|67035970|gb|AAY62911.1| small ribosomal protein subunit 4 [Porotrichopsis flacca]
          Length = 199

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|222103514|gb|ACM44286.1| small ribosomal protein subunit 4 [Iwatsukiella leucotricha]
          Length = 203

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|270300675|gb|ACZ69416.1| ribosomal protein S4 [Radula aquilegia]
          Length = 202

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRAMSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
            ++N  +VNI SY C+ GD+I ++ + K  + +     L ++ ++P +++ +   +  + 
Sbjct: 117 FVINNFTVNIPSYNCELGDIITIRNRQKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200


>gi|67035974|gb|AAY62913.1| small ribosomal protein subunit 4 [Porothamnium arbusculans]
          Length = 199

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035608|gb|AAY62735.1| small ribosomal protein subunit 4 [Cladophascum gymnomitrioides]
          Length = 199

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +    +++  VP +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQAMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|67035666|gb|AAY62764.1| small ribosomal protein subunit 4 [Atractylocarpus longisetus]
          Length = 198

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K + K  + +    + +++  VP +++ N         +I 
Sbjct: 117 NYIVNIPSYRCKPQDFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLKKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LNHESIGLNINELLVVEYYSR 196


>gi|67035927|gb|AAY62890.1| small ribosomal protein subunit 4 [Sanionia orthothecioides]
          Length = 199

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|322719573|gb|ADX07723.1| small ribosomal protein subunit 4 [Grimmia ovalis]
 gi|322719575|gb|ADX07724.1| small ribosomal protein subunit 4 [Grimmia ovalis]
 gi|322719577|gb|ADX07725.1| small ribosomal protein subunit 4 [Grimmia ovalis]
 gi|322719579|gb|ADX07726.1| small ribosomal protein subunit 4 [Grimmia ovalis]
          Length = 198

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NHIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMNFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|270300673|gb|ACZ69415.1| ribosomal protein S4 [Radula aquilegia]
          Length = 202

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRAMSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
            ++N  +VNI SY C+ GD+I ++ + K  + +     L ++ ++P +++ +   +  + 
Sbjct: 117 FVINNFTVNIPSYNCELGDIITIRNRPKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200


>gi|67035682|gb|AAY62772.1| small ribosomal protein subunit 4 [Leucobryum crispum]
          Length = 197

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             VNI SYRCK  D I +K + K  + V +  + +++  VP +++ +         +I  
Sbjct: 117 YIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFDSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L +    + +   LVVE+YSR
Sbjct: 175 -LNNESIGLKINELLVVEYYSR 195


>gi|59803297|gb|AAX07757.1| Rps4 [Greeneothallus gemmiparus]
          Length = 199

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG
Sbjct: 1   YRGPRAKIIRRLGA-LPGLSYEMIGSRSGYTNQLATNKK--ISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH++V
Sbjct: 58  -LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182
           N  +VNI SY CK  DVI +K + +  + + +   L  ER +P +++ +      +  +I
Sbjct: 117 NDNAVNIPSYNCKPQDVITIKDRRESQSVITKNINLFRERKIPNHLTFDSTRFCGSVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 IDR---EWISLKINELLVVEYYSR 197


>gi|67035813|gb|AAY62837.1| small ribosomal protein subunit 4 [Catagoniopsis berteroana]
          Length = 199

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|116010497|emb|CAL37355.1| ribosomal protein S4 [Scrophularia vernalis]
          Length = 194

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   +VP +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIIMAKDEQKSRTLIQNSLNSSPHEEVPNHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|221195455|ref|ZP_03568510.1| ribosomal protein S4 [Atopobium rimae ATCC 49626]
 gi|221184642|gb|EEE17034.1| ribosomal protein S4 [Atopobium rimae ATCC 49626]
          Length = 197

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 15/209 (7%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+   +   K  R++G +    G  K              +RR+ + S +G+QLR KQK 
Sbjct: 1   MAIDRTPVLKRCRQLGIDPIVMGINKESHREP--------RRRRRQESEYGMQLREKQKA 52

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + E +F   ++ A ++ G T  NL+S LE+RLD +V+R  F  T   ARQ V H
Sbjct: 53  KFIYGVL-ENQFHGYYELAKKNPGITGDNLMSILETRLDNVVFRLGFARTRKEARQTVRH 111

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVA 177
            H+ VNG+ V+I SYR K+GDVI V  K+K L  + E+   +E   VP +I ++ D +  
Sbjct: 112 GHITVNGQRVDIPSYRIKKGDVIAVSSKAKDLLPIKESLIASEHTAVPAWIELDLDKLQG 171

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T + +P+  +     + +   L+VE YS+
Sbjct: 172 TVLELPNRDQ---IDLDIDAQLIVELYSK 197


>gi|67035592|gb|AAY62727.1| small ribosomal protein subunit 4 [Rhamphidium dicranoides]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + +  A +L+    +++  +P +++ N         +I
Sbjct: 117 NDHIVNIPSYRCKPQDFITIKDRQESQAMILKNIDFSQKSKIPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|203284516|ref|YP_002222256.1| 30S ribosomal protein S4 [Borrelia duttonii Ly]
 gi|226697808|sp|B5RMG4|RS4_BORDL RecName: Full=30S ribosomal protein S4
 gi|201083959|gb|ACH93550.1| 30S ribosomal protein S4 [Borrelia duttonii Ly]
          Length = 208

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+++  +K K+ RR G N++ +PK    +  +   PG+HG+ R++K + +G QL  KQK+
Sbjct: 1   MNRKSIAKGKLVRRFGVNIFEQPKYDKLLKKKPNPPGMHGRSRRTKVTEYGKQLIEKQKV 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  ++FKEA R  G T  NL++ LE R+D IVYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNVFKEARRQHGVTGDNLLALLERRIDNIVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176
             +++NGR V I S   +  D+I+VK+K      V    +     R +P++I VN D + 
Sbjct: 120 GIIILNGRRVTIPSITLRANDIIQVKEKDSLKKLVRSNIEKTSTLRKLPDWIEVNADALN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +R PS  +    P +    ++VE+YS+
Sbjct: 180 VKIIRTPSRDE---IPTLANEQMIVEYYSK 206


>gi|28194737|gb|AAO33630.1|AF480985_1 ribosomal protein S4 [Oreoweisia erosa]
          Length = 196

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|328949100|ref|YP_004366437.1| ribosomal protein S4 [Treponema succinifaciens DSM 2489]
 gi|328449424|gb|AEB15140.1| ribosomal protein S4 [Treponema succinifaciens DSM 2489]
          Length = 197

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R + + K  RR+G N+ G PK+    R+  P     ++  K S +G QL  KQK+K 
Sbjct: 1   MATRRNPRFKECRRLGVNVCGHPKAM--NRANDPAF---KKSKKTSEYGKQLCEKQKVKA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG I E++ R  +  A R  G T  NLI  LE+RLD +VYR  F  +I  ARQ V+H H
Sbjct: 56  YYG-ILERQLRRYYDIASRKEGKTGENLIVGLETRLDNLVYRIGFANSIRMARQVVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V V+G+ ++I S++ K G V+ + +K+++      +     R    YI V+ +      +
Sbjct: 115 VRVDGKKISIPSFQVKPGQVVALCEKAQKNEQFKTSFLNGNRRPLAYIEVSEEAFSGKLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P   +    PV +   LVVEFYS+
Sbjct: 175 MMPKREE---IPVEINEQLVVEFYSK 197


>gi|222103534|gb|ACM44296.1| small ribosomal protein subunit 4 [Leucodon pendulus]
          Length = 203

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + ++ RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRVIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|328541046|gb|AEB21747.1| ribosomal protein S4 [Hygrolembidium rigidum]
 gi|328541048|gb|AEB21748.1| ribosomal protein S4 [Hygrolembidium rigidum]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K       Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE R D  ++R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQSLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I +++K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSIDQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---ESINLKINELLVVEYYSR 197


>gi|12642230|gb|AAK00197.1| rps4 [Physcomitrium pyriforme]
          Length = 191

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S       Q    K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V+I
Sbjct: 56  LNYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I VK + K  A + +    +++  VP +++ +         +I   L   
Sbjct: 116 PSYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRE 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 SIGLKINELLVVEYYSR 189


>gi|67035634|gb|AAY62748.1| small ribosomal protein subunit 4 [Leucoloma sprengelianum]
          Length = 198

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K        +++ +  +++  VP +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|270300671|gb|ACZ69414.1| ribosomal protein S4 [Radula jonesii]
          Length = 202

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A   +G T   LI  LE RLD I++     P+I  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPSIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
            ++N  +VNI SY C+ GD+I ++ + K  + +     L ++ ++P +++ +   +  + 
Sbjct: 117 FVINNFTVNIPSYNCELGDIITIRNRQKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200


>gi|159106799|ref|YP_001531219.1| ribosomal protein S4 [Cuscuta obtusiflora]
 gi|172048141|sp|A8W3I9|RR4_CUSOB RecName: Full=Plastid 30S ribosomal protein S4
 gi|158142523|gb|ABW20564.1| ribosomal protein S4 [Cuscuta obtusiflora]
          Length = 197

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 13/207 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KSP   R          R    S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKSPRAIRDL--------RNQSRSEYRIRLEEKQKLRF 52

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+  +  + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 53  HYG-LTEKQLINYVQIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 111

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNGR V+  SYRCK  D+I  K  +K    V  + +L   +++  ++++         
Sbjct: 112 VLVNGRLVDRPSYRCKPRDIIMPKNTTKSGVLVQNSLELFTGKELANHLNLFSTPYKGLV 171

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195


>gi|116010501|emb|CAL37357.1| ribosomal protein S4 [Abeliophyllum distichum]
 gi|116010503|emb|CAL37358.1| ribosomal protein S4 [Forsythia x intermedia]
          Length = 194

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIIMAKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|116010491|emb|CAL37352.1| ribosomal protein S4 [Vincetoxicum nigrum]
          Length = 194

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RLKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI AARQFVNHRH+LVNG  
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQFVNHRHILVNGHI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK GD+I VK + K  A + ++    + +++P ++ +          +I  S 
Sbjct: 116 VDIPSYRCKPGDIITVKDEQKSKALIQKSLDSSSHQELPSHLILQSFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|12642222|gb|AAK00193.1| rps4 [Funaria apophysata]
          Length = 191

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S       Q    K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGVLPGLTNKTPQLKSSSA----NQSAAKKISQYRIRLEEKQKLRFHYG-ITERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V+I
Sbjct: 56  LNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I VK + K  A + +    +++  VP +++ +         +I   L   
Sbjct: 116 PSYRCKPDDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRE 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 SIGLKINELLVVEYYSR 189


>gi|67035610|gb|AAY62736.1| small ribosomal protein subunit 4 [Eccremidium floridanum]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K    + +    +++  VP +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNLDFSQKYKVPNHLTFNFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|116010509|emb|CAL37361.1| ribosomal protein S4 [Chionanthus virginicus]
 gi|116010511|emb|CAL37362.1| ribosomal protein S4 [Forestiera neomexicana]
 gi|116010513|emb|CAL37363.1| ribosomal protein S4 [Olea europaea]
 gi|116010515|emb|CAL37364.1| ribosomal protein S4 [Osmanthus heterophyllus]
 gi|116010517|emb|CAL37365.1| ribosomal protein S4 [Phillyrea angustifolia]
          Length = 194

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|93213406|gb|ABF01129.1| ribosomal protein subunit 4 [Catagonium brevicaudatum]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|307683687|dbj|BAJ19822.1| ribosomal protein S4 [Picea morrisonicola]
          Length = 201

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++   KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE R D I+++    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNILFQLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +    + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|116010505|emb|CAL37359.1| ribosomal protein S4 [Fontanesia phillyreoides subsp. fortunei]
          Length = 194

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   ++P +++++      +  +I  S 
Sbjct: 116 VDIPSYRCKPRDIIMAKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGSVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|63191673|gb|AAY34798.1| small ribosomal protein subunit 4 [Levierella fabroniacea]
 gi|67036090|gb|AAY62971.1| small ribosomal protein subunit 4 [Actinothuidium hookeri]
 gi|67036096|gb|AAY62974.1| small ribosomal protein subunit 4 [Boulaya mitteni]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63101105|gb|AAY33177.1| small ribosomal protein 4 [Hygrohypnum smithii]
          Length = 201

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P         ++      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +
Sbjct: 118 VNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 178 I---LDRESIGLKINELLVVEYYSR 199


>gi|222103498|gb|ACM44278.1| small ribosomal protein subunit 4 [Hylocomium splendens]
          Length = 203

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P         ++      K S + ++L  KQK++ +Y
Sbjct: 4   RYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHY 60

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 61  G-ITERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +
Sbjct: 120 VNDYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQ 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 180 I---LDRESIGLKINELLVVEYYSR 201


>gi|37992657|gb|AAR06507.1| small ribosomal protein 4 [Pilotrichella pandurifolia]
          Length = 200

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 2   YRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           NG  V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 118 NGCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198


>gi|317134112|ref|YP_004123445.1| ribosomal protein S4 [Rhizanthella gardneri]
 gi|255985043|gb|ACU46590.1| ribosomal protein S4 [Rhizanthella gardneri]
          Length = 202

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G       K P +       L  Q R  K S + L+L  KQK + 
Sbjct: 1   MSRYLGPCFKKIRRLGALPGLTNKIPRSR----SDLQIQLRSIKKSQYRLRLEEKQKFRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGKTKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA--SQLAERDVPEYISVNHDNMVAT 178
           +LVNG  V+I +YRCK  D+I  K K +  A +++      +  ++P +++++       
Sbjct: 116 ILVNGDIVDIPNYRCKPLDIIAAKDKERSKAMIIKNYLISSSHGELPNHLTMDSLQHKGF 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  S       + +   LVVE+YSR
Sbjct: 176 VNQIIDSK---CSGLKINELLVVEYYSR 200


>gi|67035837|gb|AAY62845.1| small ribosomal protein subunit 4 [Clastobryophilum bogoricum]
          Length = 202

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ YY
Sbjct: 3   RYRGPRVKIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLDMAPTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K  A + +  +  E+  +P +++ N         +
Sbjct: 119 VNDCMVDIPSYRCKPQDFITIKNQRKSKAIISKNIEFYEKYKIPNHLTYNSLEKKGLINQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200


>gi|67035779|gb|AAY62820.1| small ribosomal protein subunit 4 [Calliergonella cuspidata]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSKTIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035570|gb|AAY62716.1| small ribosomal protein subunit 4 [Cynodontium strumiferum]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKQGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQELIGLKINELLVVEYYSR 197


>gi|67035793|gb|AAY62827.1| small ribosomal protein subunit 4 [Leptopterigynandrum
           austro-alpinum]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQXLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|3098158|gb|AAC15527.1| small ribosomal protein 4 [Wardia hygrometrica]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTSTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R +NI SYRCK  D I +K + K    +++    +++  VP +++ N         +I
Sbjct: 117 NNRIINIPSYRCKPRDFITIKDRQKSQVMIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|328541110|gb|AEB21779.1| ribosomal protein S4 [Bazzania trilobata]
          Length = 196

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG ++
Sbjct: 1   PRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N  
Sbjct: 57  ERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNN 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  + 
Sbjct: 117 IVDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR 176

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 177 ---EWINLKINELLVVEYYSR 194


>gi|17025864|gb|AAL32097.1| ribosomal protein 4 [Mitthyridium sp. Wall 2620]
          Length = 201

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    +    ++      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-LTERQLLNYVRIARKVKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +
Sbjct: 118 VNNSIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199


>gi|46486556|gb|AAS98714.1| ribosomal protein subunit 4 [Hypnodendron vitiense]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K +SK  A + +     ++  +P +++ +         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRSKSQAIISKNIDFYQKYKIPNHLTYSSLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|260780677|ref|YP_003227080.1| 30S ribosomal protein S4 [Bryopsis hypnoides]
 gi|260176755|gb|ACX33764.1| 30S ribosomal protein S4 [Bryopsis hypnoides]
          Length = 198

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    K KI RR+G       K  ++ +   PG HG R+ +KPS + ++L  KQK++ 
Sbjct: 1   MSRYRGPKLKIIRRLGVLPGLTSK--ISNKKNPPGQHG-RQNTKPSQYAIRLLEKQKLRY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+  S  K+A ++   T+  L+  LE RLD I+YR  F  TI + RQ + H+H
Sbjct: 58  NYG-VSEKQLFSYLKKARKNSRSTAQVLLELLEMRLDNILYRLGFAKTIHSGRQLITHQH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VN + V I SY+CK  D+IE    SK     L    L++  +P ++S+  +   A   
Sbjct: 117 IRVNQKKVTIPSYQCKINDIIEFAPNSKIDKKNLMNLDLSK--IPSFLSIEMNKTSAQIK 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            I    + +   + +   LV+E+YS+
Sbjct: 175 NIIPRSEVL---MDLNELLVIEYYSK 197


>gi|67036108|gb|AAY62980.1| small ribosomal protein subunit 4 [Dolichomitra cymbifolia]
          Length = 199

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCVVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|270300647|gb|ACZ69402.1| ribosomal protein S4 [Radula episcia]
          Length = 202

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTI---KPKSSFIDRSMSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A  ++G T   LI  LE RLD  ++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNTKGSTGQVLIQLLEMRLDNTIFCLGLAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +++N  +VNI SY C+ GD+I ++ + K    +       ++ ++P +++ +   +  + 
Sbjct: 117 IVINNNTVNIPSYNCEFGDIITIRNQQKSRLIITRNINSFQKLEIPNHLNFDLTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDYNSISFKINELLVVEYYSR 200


>gi|270300655|gb|ACZ69406.1| ribosomal protein S4 [Radula wichurae]
 gi|270300657|gb|ACZ69407.1| ribosomal protein S4 [Radula wichurae]
 gi|270300659|gb|ACZ69408.1| ribosomal protein S4 [Radula wichurae]
 gi|270300661|gb|ACZ69409.1| ribosomal protein S4 [Radula wichurae]
 gi|270300663|gb|ACZ69410.1| ribosomal protein S4 [Radula carringtonii]
 gi|270300665|gb|ACZ69411.1| ribosomal protein S4 [Radula carringtonii]
 gi|270300667|gb|ACZ69412.1| ribosomal protein S4 [Radula carringtonii]
 gi|270300669|gb|ACZ69413.1| ribosomal protein S4 [Radula carringtonii]
          Length = 202

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G  L G     +  +S+        +K   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGY-LPGLSNKTLKPKSFSIDRSISNKK--ISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
            ++N  +VNI SY C+ GD+I V+ + K  + +     L ++ ++P +++ +   +  + 
Sbjct: 117 FVINNFTVNIPSYNCELGDIITVRNRQKSKSIITRNMNLFQKLEIPSHLTFDSTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDCNSINFKINELLVVEYYSR 200


>gi|46486554|gb|AAS98713.1| ribosomal protein subunit 4 [Sciadocladus kerrii]
          Length = 199

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + + +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LV
Sbjct: 58  -ITERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +    +++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQTIISKNIHFSQKYKIPNHLTYNSLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|322719521|gb|ADX07697.1| small ribosomal protein subunit 4 [Racomitrium subsecundum]
 gi|322719523|gb|ADX07698.1| small ribosomal protein subunit 4 [Racomitrium subsecundum]
 gi|322719525|gb|ADX07699.1| small ribosomal protein subunit 4 [Racomitrium subsecundum]
          Length = 198

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NHIVNIPSYRCKPQDFITIKDRQKSQAMIMKNIDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LNRESIGLKINELLVVEYYSR 196


>gi|3098242|gb|AAC15569.1| small ribosomal protein 4 [Goniobryum subbasilare]
          Length = 200

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +
Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDQQKYQTIISKNIYFYQKYKIPNHLTYNSLEKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|67035799|gb|AAY62830.1| small ribosomal protein subunit 4 [Phyllogonium fulgens]
          Length = 199

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|49182817|gb|AAT57870.1| small ribosomal protein [Tritomaria quinquedentata]
          Length = 195

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSVNQTVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|63100989|gb|AAY33119.1| small ribosomal protein 4 [Dendropogonella rufescens]
          Length = 199

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NNGIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|294337120|emb|CAQ52710.1| ribosomal protein S4 [Glossadelphus baldwinii]
          Length = 202

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+P    S     +      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I   L      + +   LVVE+YSR
Sbjct: 177 NEI---LDRESIGLKINELLVVEYYSR 200


>gi|67035907|gb|AAY62880.1| small ribosomal protein subunit 4 [Palustriella falcata]
          Length = 199

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E+RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPETRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKSQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|322719469|gb|ADX07671.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides]
 gi|322719471|gb|ADX07672.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides]
 gi|322719473|gb|ADX07673.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides]
 gi|322719475|gb|ADX07674.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides]
 gi|322719477|gb|ADX07675.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides]
 gi|322719479|gb|ADX07676.1| small ribosomal protein subunit 4 [Racomitrium anomodontoides]
          Length = 198

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKAPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NLIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|121761861|gb|ABM65016.1| ribosomal protein S4 [Plagiomnium cf. tezukae Wyatt 1799]
          Length = 198

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE+RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLETRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I 
Sbjct: 117 DRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPDHLTYNSLNKKGLVNQIL 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 177 DRD---SIDLKINELLVVEYYSR 196


>gi|224534184|ref|ZP_03674763.1| ribosomal protein S4 [Borrelia spielmanii A14S]
 gi|224514545|gb|EEF84860.1| ribosomal protein S4 [Borrelia spielmanii A14S]
          Length = 208

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D +VYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             +++NGR V I S   +  D I++K+K      +    +   + R++P +I VN DN+ 
Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADNLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|11121337|emb|CAC14830.1| ribosomal protein subunit 4 [Plagiothecium undulatum]
          Length = 199

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|309322363|ref|YP_003934443.1| ribosomal protein S4 [Cathaya argyrophylla]
 gi|307683289|dbj|BAJ19596.1| ribosomal protein S4 [Cathaya argyrophylla]
          Length = 203

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P   +        +    K S + ++   KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPQKRKDS----MNRSSSRKISQYRIRSEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I+++    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFQLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDNMVA 177
           + VN   V+I SY CK  DVI ++ + +  A + +   L +R+   +P +++ +      
Sbjct: 116 IQVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRNRDKLPNHLTFHSLQCKG 175

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  S       + +   LVVE+YSR
Sbjct: 176 FINQIIDSK---WISLKINELLVVEYYSR 201


>gi|67035572|gb|AAY62717.1| small ribosomal protein subunit 4 [Hymenolomopsis tolucensis]
          Length = 196

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|121761857|gb|ABM65014.1| ribosomal protein S4 [Plagiomnium cf. cuspidatum Wyatt 1774]
 gi|121761865|gb|ABM65018.1| ribosomal protein S4 [Plagiomnium cf. cuspidatum Wyatt 1832]
          Length = 199

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D+I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 117 NDRLVNIPSYRCKPQDLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 LDRD---FIDLKINELLVVEYYSR 197


>gi|158518576|sp|Q49CB8|RR4_CUSSA RecName: Full=Plastid 30S ribosomal protein S4
          Length = 197

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 13/207 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KSP   R          R +  S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTNKSPRAIRDL--------RNNSRSEYRIRLEEKQKLRF 52

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+  +  + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 53  HYG-LTEKQLINYVQIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTIXAARQLVNHRH 111

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNGR VN  SYRCK  D+I  K  +K    V  + +L   +++  ++++         
Sbjct: 112 VLVNGRLVNRPSYRCKPHDIIMPKNTTKSGVLVQNSLELFTGKELANHLNLFSTPYKGLV 171

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195


>gi|187776652|ref|ZP_02993125.1| hypothetical protein CLOSPO_00167 [Clostridium sporogenes ATCC
           15579]
 gi|187775311|gb|EDU39113.1| hypothetical protein CLOSPO_00167 [Clostridium sporogenes ATCC
           15579]
          Length = 197

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 107/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  VNI SY  K GDVI +++K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNGSKVNIPSYGVKTGDVITLREKYRKNDEFADNFLALKKFTLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197


>gi|63100987|gb|AAY33118.1| small ribosomal protein 4 [Callicladium haldanianum]
 gi|67035819|gb|AAY62840.1| small ribosomal protein subunit 4 [Eurohypnum leptothallum]
 gi|222103512|gb|ACM44285.1| small ribosomal protein subunit 4 [Iwatsukiella leucotricha]
          Length = 199

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|26399118|sp|P59149|RR4_NECCR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23504375|emb|CAC80632.1| small ribosomal protein 4 [Neckera crispa]
          Length = 202

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       K+     S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSISNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETMISKNIELYQKSKIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|222103558|gb|ACM44308.1| small ribosomal protein subunit 4 [Oxystegus tenuirostris]
          Length = 203

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S            K S + ++L  KQK++ +Y
Sbjct: 4   RYRGPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHY 60

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 61  G-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +
Sbjct: 120 VNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQ 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 180 I---LDQELIGLKINELLVVEYYSR 201


>gi|17025839|gb|AAL32085.1| ribosomal protein 4 [Mitthyridium sp. Streimann 40876]
          Length = 201

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    +    ++      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +
Sbjct: 118 VNNNMVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199


>gi|63101011|gb|AAY33130.1| small ribosomal protein 4 [Climacium americanum]
          Length = 200

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +
Sbjct: 117 VNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|270300677|gb|ACZ69417.1| ribosomal protein S4 [Radula lindenbergiana]
 gi|270300679|gb|ACZ69418.1| ribosomal protein S4 [Radula lindenbergiana]
          Length = 202

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
            ++N  +VNI SY C+ GD+I V+ + K  + +     L ++ ++P +++ +   +  + 
Sbjct: 117 FVINNFTVNIPSYNCELGDIITVRNRHKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDYNSINFKINELLVVEYYSR 200


>gi|67036012|gb|AAY62932.1| small ribosomal protein subunit 4 [Palamocladium leskeoides]
          Length = 199

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|220912772|ref|YP_002488081.1| 30S ribosomal protein S4 [Arthrobacter chlorophenolicus A6]
 gi|254764565|sp|B8H9C3|RS4_ARTCA RecName: Full=30S ribosomal protein S4
 gi|219859650|gb|ACL39992.1| RNA-binding S4 domain protein [Arthrobacter chlorophenolicus A6]
          Length = 208

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+    ++   ++ R +G  L  +    +  R YGPG HG+ RK + S + ++LR KQ++
Sbjct: 1   MANNTRARRQARLSRSLGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG I E +    F+EA R++G T  NLI  LE RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQYG-IREAQMTRAFEEARRTKGLTGENLIELLEMRLDALVLRAGFARTIAQARQLVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174
           RH+LV+G  V+  S+R  EG ++ V  +S+ +  +  A+  A RD    VP Y+ V  + 
Sbjct: 120 RHILVDGIRVDRPSFRVGEGQLVHVHSRSETMVPLQVAAAGAHRDVLPAVPAYLDVKLEA 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A  VR P   +    PV  +  LVVEFY+R
Sbjct: 180 LQARLVRRPKRSE---IPVTCEEQLVVEFYAR 208


>gi|80974144|gb|ABB53765.1| small ribosomal subunit protein 4 [Euptychium setigerum]
          Length = 202

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITEQQLLNYVRIARKTKGSTGEVLLQLPEMRSDNILFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   VN   YRCK  D I VK +      + +     ++  +P +++          
Sbjct: 117 ILVNDCIVNKPRYRCKPQDFIIVKNEKNSEGIINKDGDFHQKSKIPNHLTYIFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NKI---LDRESIGLKINELLVVEYYSR 200


>gi|24473818|gb|AAL82752.1| small ribosomal subunit protein 4 [Brachymenium systylium]
          Length = 199

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNINLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63191675|gb|AAY34799.1| small ribosomal protein subunit 4 [Orthostichella pentasticha]
          Length = 199

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           NG  V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NGCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|323404246|gb|ADX62377.1| small ribosomal protein subunit 4 [Schistidium liliputanum]
          Length = 198

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|3098200|gb|AAC15548.1| small ribosomal protein 4 [Meesia uliginosa]
          Length = 199

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLEFYQKYKIPNHLTYNSLKKQGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|78369619|gb|ABB43039.1| ribosomal protein 4 [Exostratum blumii]
          Length = 201

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K      +    ++      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVKIVRRLGVLPGLTNKVLQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I VK + K    + +  +  ++  +P +++ N         +
Sbjct: 118 VNNFIVDIPSYRCKPQDFITVKNQQKSEVIINKNIEFYQKFKIPNHLTYNSLEKKGLVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 178 I---LDSESIGLKINELLVVEYYSR 199


>gi|119960630|ref|YP_948024.1| 30S ribosomal protein S4 [Arthrobacter aurescens TC1]
 gi|152060931|sp|A1R712|RS4_ARTAT RecName: Full=30S ribosomal protein S4
 gi|119947489|gb|ABM06400.1| ribosomal protein S4 [Arthrobacter aurescens TC1]
          Length = 206

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 8/210 (3%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+    ++   ++ R +G  L  +    +  R YGPG HG+ RK + S + ++LR KQ++
Sbjct: 1   MANNTRARRTARLSRALGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG I E +    F+EA R++G T  NL+  LE RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQYG-IREAQMTRAFEEARRTKGLTGENLVELLEMRLDALVLRAGFARTIAQARQLVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176
           RH++V+G  V+  S+R  EG +I V  +S+ +     A+  A    +VP Y+ V  D + 
Sbjct: 120 RHIMVDGIRVDRPSFRVGEGQLIHVHSRSEVMPPFQVAAAGAHVLNNVPAYLDVKIDALQ 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A  VR P   +    PVI +  LVVEFY+R
Sbjct: 180 ARLVRRPKRSE---VPVICEEQLVVEFYAR 206


>gi|222103428|gb|ACM44243.1| small ribosomal protein subunit 4 [Ceratodon purpureus]
          Length = 199

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 2   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 57

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 58  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 117

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K + K    +++ +  +++  VP +++ N         +I 
Sbjct: 118 DNIVNIPSYRCKPQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI- 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 177 --LDQESVGLKINELLVVEYYSR 197


>gi|67035777|gb|AAY62819.1| small ribosomal protein subunit 4 [Macrothamnium macrocarpum]
 gi|67036068|gb|AAY62960.1| small ribosomal protein subunit 4 [Gollania cylindricarpa]
          Length = 199

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|49182813|gb|AAT57868.1| small ribosomal protein [Triandrophyllum subtrifidum]
          Length = 195

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGVLPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-VTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHIAINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGSINQAINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|49182720|gb|AAT57822.1| small ribosomal protein [Herbertus sakurai]
 gi|49182722|gb|AAT57823.1| small ribosomal protein [Herbertus subdentatus]
          Length = 195

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCQLGDIITIKNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|328541160|gb|AEB21804.1| ribosomal protein S4 [Lepidozia sp. 1 von Konrat 6/20-4]
          Length = 198

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSTKLRGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---ELINLKINELLVVEYYSR 195


>gi|322719559|gb|ADX07716.1| small ribosomal protein subunit 4 [Schistidium strictum]
 gi|322719561|gb|ADX07717.1| small ribosomal protein subunit 4 [Schistidium strictum]
 gi|322719563|gb|ADX07718.1| small ribosomal protein subunit 4 [Schistidium strictum]
 gi|322719565|gb|ADX07719.1| small ribosomal protein subunit 4 [Schistidium strictum]
 gi|322719569|gb|ADX07721.1| small ribosomal protein subunit 4 [Schistidium apocarpum]
 gi|323404242|gb|ADX62375.1| small ribosomal protein subunit 4 [Schistidium trichodon]
 gi|323404244|gb|ADX62376.1| small ribosomal protein subunit 4 [Schistidium trichodon]
 gi|323404248|gb|ADX62378.1| small ribosomal protein subunit 4 [Schistidium trichodon var.
           nutans]
          Length = 198

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|63191879|gb|AAY34899.1| small ribosomal protein subunit 4 [Gymnostomiella vernicosa]
          Length = 198

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S+    +      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R +NI SYRCK  D I +K + K    + +     ++  +P +++ N         +I 
Sbjct: 117 NRIINIPSYRCKPQDFITIKDRQKSQVLITKNIGFFQKSKIPNHLTFNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|63101041|gb|AAY33145.1| small ribosomal protein 4 [Cyptodontopsis obtusifolia]
          Length = 199

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|215400724|ref|YP_002327485.1| ribosomal protein S4 [Vaucheria litorea]
 gi|194441174|gb|ACF70902.1| ribosomal protein S4 [Vaucheria litorea]
          Length = 204

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + KI RR G NL G     +  +  G     Q++  K S + ++L  KQK++ 
Sbjct: 1   MARYLGPRLKIIRRFG-NLPGLTSKIITKKPSGQQASNQKKLQKSSDYKIRLFEKQKLRY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++ R    EA R +G T+  L+  LE RLDTI++R    PTI AARQFVNH H
Sbjct: 60  NYG-LTERQLRKYVSEARRKKGSTAFYLMQLLEMRLDTIIFRLGLAPTIPAARQFVNHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +L+N + +NI S++C   D+I +K K      V ++        +P ++++N   + A  
Sbjct: 119 ILINKKKINIPSFQCHPTDIITIKNKKGTKQLVEKSLANPRFSTLPNHLTLNTKLLQAEV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I            +   L+VE+Y+R
Sbjct: 179 KDIVIRKD---LSFEVNDLLIVEYYAR 202


>gi|17025837|gb|AAL32084.1| ribosomal protein 4 [Mitthyridium sp. Mishler 7/23/98]
          Length = 201

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    +    ++      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVKIIRRLGILSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVR 181
           VN   VNI SY+CK  D I +K + K    +++ ++  ++   P +++ N         +
Sbjct: 118 VNNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFFSKHKTPNHLTFNSVEKKGLVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199


>gi|222103482|gb|ACM44270.1| small ribosomal protein subunit 4 [Drepanocladus aduncus]
          Length = 202

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKSQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|222103504|gb|ACM44281.1| small ribosomal protein subunit 4 [Amblystegium serpens]
          Length = 203

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|67035771|gb|AAY62816.1| small ribosomal protein subunit 4 [Andoa berthelotiana]
          Length = 199

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NNCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63100973|gb|AAY33111.1| small ribosomal protein 4 [Homomallium adnatum]
          Length = 199

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A + +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|294786846|ref|ZP_06752100.1| ribosomal protein S4 [Parascardovia denticolens F0305]
 gi|315226482|ref|ZP_07868270.1| 30S ribosomal protein S4 [Parascardovia denticolens DSM 10105]
 gi|294485679|gb|EFG33313.1| ribosomal protein S4 [Parascardovia denticolens F0305]
 gi|315120614|gb|EFT83746.1| 30S ribosomal protein S4 [Parascardovia denticolens DSM 10105]
          Length = 208

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K + ++   ++ R +G  L  + +S    R YGPG HG+ R+   S + ++LR KQ++
Sbjct: 1   MTKVQRARRQVRLSRALGIALTPKAQSLFEKRPYGPGEHGRDRRRAESDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG +SEK+ RS+++ A R+ G T  ++   LE+RLD +V R+ F  T   ARQFV H
Sbjct: 61  RAQYG-VSEKQLRSVYERATRASGQTGTSMQVQLETRLDALVLRSGFARTTAQARQFVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174
           RH+LV+G  V+  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  +
Sbjct: 120 RHILVDGNIVDRPSYRVKPGQTIQVKPKSQTMEPFQAAAEGVHRDVLPAVPGYLDVNLPS 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + AT  R+P   +    PV +    VVE+Y+R
Sbjct: 180 LKATLTRLPEVEE---IPVQVNIQYVVEYYAR 208


>gi|222103502|gb|ACM44280.1| small ribosomal protein subunit 4 [Thuidium tamariscinum]
          Length = 203

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K           ++      K S + ++L  KQK++ +Y
Sbjct: 4   RYRGPRVRIIRRLGTLPGLTNKISQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHY 60

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 61  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 119

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +
Sbjct: 120 VNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 180 I---LDRESIGLKINELLVVEYYSR 201


>gi|47606926|gb|AAT36383.1| ribosomal protein subunit 4 [Pyrrhobryum dozyanum]
          Length = 199

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ YYG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITEQQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|222103460|gb|ACM44259.1| small ribosomal protein subunit 4 [Ceratodon purpureus]
          Length = 198

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K + K    +++ +  +++  VP +++ N         +I 
Sbjct: 117 DNIVNIPSYRCKPQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESVGLKINELLVVEYYSR 196


>gi|49182665|gb|AAT57795.1| small ribosomal protein [Adelanthus lindenbergianus]
          Length = 195

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ G++I +K K K  + + +   L +   +P +++ +   +     +  +  
Sbjct: 117 VDIPSYNCEPGNIITIKNKQKSQSIITKNINLFQNLKIPSHLTFDSIQLRGFVNQTVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|67035955|gb|AAY62904.1| small ribosomal protein subunit 4 [Handeliobryum sikkimense]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDCITIKDQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|24473806|gb|AAL82746.1| small ribosomal subunit protein 4 [Acidodontium megalocarpum]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDFITIKDQQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035757|gb|AAY62809.1| small ribosomal protein subunit 4 [Orthomitrium tuberculatum]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H++V
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 117 NHRIVDIPSYRCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 LDRK---LIGLKINELLVVEYYSR 197


>gi|24473848|gb|AAL82768.1| small ribosomal subunit protein 4 [Imbribryum muehlenbeckii]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ V+HRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++  +P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKIPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|3098146|gb|AAC15521.1| small ribosomal protein 4 [Funaria hygrometrica]
          Length = 190

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 9/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S       Q    K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGVLPGLTNKTPQLKSSSP----NQSAAKKISQYRIRLEEKQKLRFHYG-ITERQLL 55

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V+I 
Sbjct: 56  NYVRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIP 115

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I VK + K  A + +    +++  VP +++ +         +I   L    
Sbjct: 116 SYRCKPEDSITVKNRQKSQAIITKNIDFSQKAKVPNHLTFDSTQKKGLVNQI---LDRES 172

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 173 IGLKINELLVVEYYSR 188


>gi|116010523|emb|CAL37368.1| ribosomal protein S4 [Jasminum arborescens]
          Length = 196

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       KSP      G  L  Q R  K S + ++L  KQK+  +YG + E
Sbjct: 1   RFKKIRRLGALPGLTNKSP----KAGSDLRKQSRSRKKSQYRIRLEEKQKLCFHYG-LRE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +     + A +++G T   L+  LE RLD I++R     TI AARQ V HRH+LVNGR 
Sbjct: 56  YQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVTHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186
           V+  SYRCK  D+I  K   K    +  +   +  +++P ++++N         +I  S 
Sbjct: 116 VDRPSYRCKPRDIIMTKDNQKSRTLIQNSLDSSPHKELPNHLTLNPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|203288050|ref|YP_002223065.1| 30S ribosomal protein S4 [Borrelia recurrentis A1]
 gi|226697811|sp|B5RPW0|RS4_BORRA RecName: Full=30S ribosomal protein S4
 gi|201085270|gb|ACH94844.1| 30S ribosomal protein S4 [Borrelia recurrentis A1]
          Length = 208

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 123/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+++  +K K+ RR G N++ +PK    +  ++  PG+HG+ R++K + +G QL  KQK+
Sbjct: 1   MNRKSIAKGKLVRRFGVNIFEQPKYDKLLKKKTNPPGMHGRSRRTKVTEYGKQLIEKQKV 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  ++FKEA R  G T  NL++ LE R+D IVYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNVFKEARRQHGVTGDNLLALLERRIDNIVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176
             +++NGR V I S   +  D+I+VK+K      V    +     R +P++I VN D + 
Sbjct: 120 GIIILNGRRVTIPSITLRANDIIQVKEKDSFKKLVRSNIEKTSTLRKLPDWIEVNADALN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +R PS  +    P +    ++VE+YS+
Sbjct: 180 VKIIRTPSRDE---IPTLANEQMIVEYYSK 206


>gi|89147826|gb|ABD62761.1| ribosomal protein 4 [Gyrothyra underwoodiana]
          Length = 197

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E+
Sbjct: 4   VKIIRRLGALPGLTSKILKSKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTER 59

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +       A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V
Sbjct: 60  QLLKYVYIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNNIV 119

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  ++ +   
Sbjct: 120 DIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDPVELQGSVNQMINR-- 177

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 178 -EWVNLKINELLVVEYYSR 195


>gi|224532017|ref|ZP_03672649.1| ribosomal protein S4 [Borrelia valaisiana VS116]
 gi|224511482|gb|EEF81888.1| ribosomal protein S4 [Borrelia valaisiana VS116]
          Length = 208

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D IVYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSLLERRIDNIVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             V++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++ 
Sbjct: 120 GIVILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|63191689|gb|AAY34806.1| small ribosomal protein subunit 4 [Loeskypnum badium]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    L+      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|3098254|gb|AAC15575.1| small ribosomal protein 4 [Bryolawtonia vancouveriensis]
 gi|67036078|gb|AAY62965.1| small ribosomal protein subunit 4 [Dolichomitriopsis diversiformis]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|226321184|ref|ZP_03796723.1| ribosomal protein S4 [Borrelia burgdorferi 29805]
 gi|226233417|gb|EEH32159.1| ribosomal protein S4 [Borrelia burgdorferi 29805]
          Length = 208

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D +VYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAVSRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             +++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++ 
Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|48527383|gb|AAT45824.1| small ribosomal protein 4 [Plagiochila integerrima]
          Length = 195

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLGALAGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  + R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     +R  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKKKSQSIVTKNINSFQRLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVV 201
            ++ +        + +   LVV
Sbjct: 177 NQMINR---EWINLKINELLVV 195


>gi|63191659|gb|AAY34791.1| small ribosomal protein subunit 4 [Ctenidium molluscum]
 gi|63191661|gb|AAY34792.1| small ribosomal protein subunit 4 [Hyocomium armoricum]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|328541034|gb|AEB21741.1| ribosomal protein S4 [Kurzia sp. Brown 03/140a]
          Length = 203

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS       KI RR+G       +     +             K S + ++L  KQK++ 
Sbjct: 1   MSXYRGPXVKIIRRLGALPGLTSRXL---KPKSGXNDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T    +  LE RLD  + R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQSLKYVRIARRAKGSTGQVSLQLLEMRLDNTILRLGMASTIPEARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +K+K K  + + +   L +  ++P +++ +   +  + 
Sbjct: 117 ISINKNIVDIPSYNCEPGDIITIKKKQKSQSVITKNVNLFQNLEIPSHLTFDLIKLCGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R  +        + +   LVVE+YSR
Sbjct: 177 NRTINR---ESIDLKINELLVVEYYSR 200


>gi|67035901|gb|AAY62877.1| small ribosomal protein subunit 4 [Vittia pachyloma]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +   +  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQQSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|47606910|gb|AAT36375.1| ribosomal protein subunit 4 [Leucodon julaceus]
          Length = 199

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|157689528|gb|ABV65320.1| ribosomal protein S4 [Nitraria retusa]
          Length = 193

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  +   K  A +      +   ++P++++++         +I  S  
Sbjct: 116 DIPSYRCKPQDIITARDDHKSRALIQTYLDSSHHEELPKHLTLHVSQYKGLVNQIIDSK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVGLKINELLVVEYYSR 191


>gi|157689504|gb|ABV65308.1| ribosomal protein S4 [Ixonanthes icosandra x Ixonanthes cuneata]
          Length = 195

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S F ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQFRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR
Sbjct: 56  ERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  K + K  A +  +     ++++P+++++          +I  S
Sbjct: 116 IVDIPSYRCKPRDIITAKDEQKSRAMIQNSLDSFPQKELPKHLTLRPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   L+VE+YSR
Sbjct: 176 K---WTGLKINELLIVEYYSR 193


>gi|63191849|gb|AAY34884.1| small ribosomal protein subunit 4 [Reimersia inconspicua]
          Length = 199

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNCIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKYKIPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|222103540|gb|ACM44299.1| small ribosomal protein subunit 4 [Climacium japonicum]
          Length = 204

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 6   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 62

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 63  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 121

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  + +++  +P +++ +         +I
Sbjct: 122 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFSQKSKIPNHLTYSSLEKKGLVNQI 181

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 182 ---LDRESIGLKINELLVVEYYSR 202


>gi|219684339|ref|ZP_03539283.1| ribosomal protein S4 [Borrelia garinii PBr]
 gi|219672328|gb|EED29381.1| ribosomal protein S4 [Borrelia garinii PBr]
          Length = 208

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKKIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D IVYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNIVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             +++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++ 
Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|195941435|ref|ZP_03086817.1| 30S ribosomal protein S4 [Borrelia burgdorferi 80a]
 gi|216264611|ref|ZP_03436603.1| ribosomal protein S4 [Borrelia burgdorferi 156a]
 gi|218249862|ref|YP_002375120.1| ribosomal protein S4 [Borrelia burgdorferi ZS7]
 gi|221218143|ref|ZP_03589609.1| ribosomal protein S4 [Borrelia burgdorferi 72a]
 gi|223889058|ref|ZP_03623648.1| ribosomal protein S4 [Borrelia burgdorferi 64b]
 gi|224532426|ref|ZP_03673053.1| ribosomal protein S4 [Borrelia burgdorferi WI91-23]
 gi|225548830|ref|ZP_03769807.1| ribosomal protein S4 [Borrelia burgdorferi 94a]
 gi|226697807|sp|B7J2H5|RS4_BORBZ RecName: Full=30S ribosomal protein S4
 gi|215981084|gb|EEC21891.1| ribosomal protein S4 [Borrelia burgdorferi 156a]
 gi|218165050|gb|ACK75111.1| ribosomal protein S4 [Borrelia burgdorferi ZS7]
 gi|221192091|gb|EEE18312.1| ribosomal protein S4 [Borrelia burgdorferi 72a]
 gi|223885484|gb|EEF56584.1| ribosomal protein S4 [Borrelia burgdorferi 64b]
 gi|224512636|gb|EEF83010.1| ribosomal protein S4 [Borrelia burgdorferi WI91-23]
 gi|225370433|gb|EEG99869.1| ribosomal protein S4 [Borrelia burgdorferi 94a]
 gi|312148256|gb|ADQ30915.1| ribosomal protein S4 [Borrelia burgdorferi JD1]
 gi|312149661|gb|ADQ29732.1| ribosomal protein S4 [Borrelia burgdorferi N40]
          Length = 208

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D +VYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             +++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++ 
Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|3098194|gb|AAC15545.1| small ribosomal protein 4 [Orthodontium lineare]
          Length = 197

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN 
Sbjct: 57  TERQLLNYVRVARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I  
Sbjct: 117 RIVDIPSYRCKPQDFITIKDQQKSQAIIDKNLDFYQKSKIPNHLTYNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|67035674|gb|AAY62768.1| small ribosomal protein subunit 4 [Dicranodontium meridionale]
          Length = 199

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K    V +  + +++  VP +++ N         +I
Sbjct: 117 NNYIVNIPSYRCKPQDFITIKNRQKSQFIVTKNIEFSQKYKVPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LNKESIGLKINELLVVEYYSR 197


>gi|320537621|ref|ZP_08037557.1| ribosomal protein S4 [Treponema phagedenis F0421]
 gi|320145539|gb|EFW37219.1| ribosomal protein S4 [Treponema phagedenis F0421]
          Length = 210

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 11/211 (5%)

Query: 3   KRE----SSKHKIDRRIGENLWGRPK--SPVNTRSYGPGL-HGQRRKSKPSYFGLQLRAK 55
           +        K KI RR+G N++G PK    ++ +  GPG   G + + K S +G QL+ K
Sbjct: 4   RYTMAVKQPKGKIVRRLGVNIFGNPKYSKLLDKKPNGPGKVRGAKSRGKMSVYGEQLKEK 63

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK +  YG +SE++FR++F +A + +G T  N++S +E RLD  +YR  F  +   ARQ 
Sbjct: 64  QKFRFAYG-MSERQFRNLFAKAQQMKGVTGDNMLSLMEQRLDNTIYRMGFAISRAQARQM 122

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM 175
           V+H + L+NG+  NI S R K  DVI  K K      +     L+      +++V+ +N+
Sbjct: 123 VSHAYFLINGKPANIPSMRIKANDVITSKDKKGIQNLIRHNLSLSHGSRGSWLAVDEENL 182

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            AT   +PS+    P         VVE+YSR
Sbjct: 183 SATVSILPSATDIQPVG---NIQYVVEYYSR 210


>gi|325963404|ref|YP_004241310.1| 30S ribosomal protein S4P [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469491|gb|ADX73176.1| SSU ribosomal protein S4P [Arthrobacter phenanthrenivorans Sphe3]
          Length = 208

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+    ++   ++ R +G  L  +    +  R YGPG HG+ RK + S + ++LR KQ++
Sbjct: 1   MANNTRARRQARLSRSLGIALTPKAAKYMERRPYGPGEHGRARKKQDSDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG I E +    F+EA R++G T  NLI  LE RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQYG-IREAQMTRAFEEARRTKGLTGENLIELLEMRLDALVLRAGFARTIAQARQLVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174
           RH++V+G  V+  S+R  EG +I V  +S+ +  +  A+  A RD    VP Y+ V  + 
Sbjct: 120 RHIMVDGVRVDRPSFRVGEGQLIHVHSRSETMVPLQVAAAGAHRDVLPAVPGYLDVKLEA 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A  VR P   +    PV  +  LVVEFY+R
Sbjct: 180 LQARLVRRPKRSE---VPVTCEEQLVVEFYAR 208


>gi|297179941|gb|ADI23950.1| small ribosomal protein 4 [Leucobryum sp. Vanderpoorten s.n.]
          Length = 197

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             VNI SYRCK  D I +K + K  + V +  + +++  VP +++ N         +I  
Sbjct: 117 YIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LNHESIGLKINELLVVEYYSR 195


>gi|63100995|gb|AAY33122.1| small ribosomal protein 4 [Pireella angustifolia]
          Length = 198

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITEQQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I 
Sbjct: 117 HCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|67035895|gb|AAY62874.1| small ribosomal protein subunit 4 [Amblystegium serpens]
          Length = 199

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|157689544|gb|ABV65328.1| ribosomal protein S4 [Qualea parviflora]
          Length = 194

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  +   K  A V      +   +VP++++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITARDDQKSRAMVQNYLDSSPHEEVPKHLTIHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|63078617|gb|AAY29395.1| ribosomal protein S4 [Tortella flavovirens]
 gi|63078619|gb|AAY29396.1| ribosomal protein S4 [Tortella flavovirens]
 gi|63078621|gb|AAY29397.1| ribosomal protein S4 [Tortella flavovirens var. glareicola]
          Length = 197

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    L+  ++    S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSSINQLNSNKK---ISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|51598868|ref|YP_073056.1| 30S ribosomal protein S4 [Borrelia garinii PBi]
 gi|61215482|sp|Q660Q7|RS4_BORGA RecName: Full=30S ribosomal protein S4
 gi|51573439|gb|AAU07464.1| ribosomal protein S4 [Borrelia garinii PBi]
          Length = 208

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D IVYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNIVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             +++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++ 
Sbjct: 120 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|26399170|sp|Q9FSD9|RR4_PELNE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|10933881|emb|CAC14050.1| small ribosomal protein 4 [Pellia neesiana]
          Length = 200

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K  +   S   G     +K   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRTKIIRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGQILSQTLEMRLDNIIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L+N  +V+I SY C+  DVI V  + K+   +       +  VP +++ +      +  
Sbjct: 117 ILINDNTVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVN 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +           + +   LVVE+YSR
Sbjct: 176 QTIDR---ECIDLKINELLVVEYYSR 198


>gi|222103480|gb|ACM44269.1| small ribosomal protein subunit 4 [Codriophorus fascicularis]
          Length = 202

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 5   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 60

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 61  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 120

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 121 NRIVNIPSYRCKPQDFITIKDRQKSQAMIMKNIYFSQKYKIPNHLTFNSLENKGLINQI- 179

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 180 --LDHESIGLKINELLVVEYYSR 200


>gi|46486570|gb|AAS98721.1| ribosomal protein subunit 4 [Racopilum spectabile]
          Length = 200

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I +K + K  A   +     ++  +P +++ +         +
Sbjct: 117 VNDRIVNIPSYRCKPQDFITIKDRQKSQAITSKDIDFYQKSKIPNHLTYSSLEKKGFVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198


>gi|63101039|gb|AAY33144.1| small ribosomal protein 4 [Dendrocryphaea cuspidata]
          Length = 199

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCVVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|47606884|gb|AAT36362.1| ribosomal protein subunit 4 [Bryobrothera crenulata]
          Length = 200

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K      S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +
Sbjct: 117 VNNFIVDIPSYRCKPQDFITIKNQKKSEVIINKNMEFYQKSKIPNHLTYSSLEKKGLVKQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|15594960|ref|NP_212749.1| 30S ribosomal protein S4 [Borrelia burgdorferi B31]
 gi|3914903|sp|O51560|RS4_BORBU RecName: Full=30S ribosomal protein S4
 gi|2688529|gb|AAC66961.1| ribosomal protein S4 (rpsD) [Borrelia burgdorferi B31]
          Length = 209

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 2   MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 61

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D +VYRA F  +   ARQ V+H
Sbjct: 62  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSH 120

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             +++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++ 
Sbjct: 121 GIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 180

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 181 IKVKHAPSRDE---IPTLANEQMVVEYYSK 207


>gi|323148832|ref|YP_004221925.1| ribosomal protein S4 [Erodium carvifolium]
 gi|316926296|gb|ADU58149.1| ribosomal protein S4 [Erodium carvifolium]
          Length = 201

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 17/211 (8%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K   R+G       K P       P      R  K S +  +L  KQK++ 
Sbjct: 1   MSRYRGPRFKKICRLGALPGLTSKEP--RDPTPP------RFKKKSQYHTRLEEKQKLRF 52

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 53  HYG-LTERQLLKYVRIAGKAKGPTGEVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRH 111

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-----LAERDVPEYISVNHDNM 175
           +LVNGR V+I SYRCK  D+I  ++K K    +    Q        R +  +++      
Sbjct: 112 ILVNGRIVDIPSYRCKPRDIITAREKEKSRTLIQNYLQNSLNSSPRRKLANHLTTQPLQY 171

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +I  S       + +   LVVE+YSR
Sbjct: 172 KGLVNQIIDSK---WVGLKINELLVVEYYSR 199


>gi|322719481|gb|ADX07677.1| small ribosomal protein subunit 4 [Racomitrium barbuloides]
 gi|322719483|gb|ADX07678.1| small ribosomal protein subunit 4 [Racomitrium barbuloides]
 gi|322719485|gb|ADX07679.1| small ribosomal protein subunit 4 [Niphotrichum ericoides]
 gi|322719487|gb|ADX07680.1| small ribosomal protein subunit 4 [Niphotrichum ericoides]
 gi|322719489|gb|ADX07681.1| small ribosomal protein subunit 4 [Niphotrichum ericoides]
          Length = 198

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|212716064|ref|ZP_03324192.1| hypothetical protein BIFCAT_00977 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661431|gb|EEB22006.1| hypothetical protein BIFCAT_00977 [Bifidobacterium catenulatum DSM
           16992]
          Length = 208

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T + +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNVV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQAAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           + +    PV +    VVEFY+R
Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208


>gi|63100981|gb|AAY33115.1| small ribosomal protein 4 [Ectropothecium leptochaeton]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I  YRCK  D+I +K + K    + +  +  +R  +P +++ +         +I
Sbjct: 117 NDCIVDISGYRCKPQDLITIKNQQKSETIINKNIEFYQRSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|17025808|gb|AAL32071.1| ribosomal protein 4 [Syrrhopodon mahensis]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++  + + +   P +++ N         +I
Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKTPNHLTFNSIEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|270300645|gb|ACZ69401.1| ribosomal protein S4 [Radula antilleana]
 gi|270300649|gb|ACZ69403.1| ribosomal protein S4 [Radula nudicaulis]
 gi|270300651|gb|ACZ69404.1| ribosomal protein S4 [Radula nudicaulis]
          Length = 202

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGYLPGLSNKTI---KPKSSFIDRSMSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+     + A  ++G T   LI  LE RLD  ++     PTI  ARQ VNH+H
Sbjct: 58  HYG-LTEKQLLKYVRIARNTKGSTGQVLIQLLEMRLDNTIFCLGLAPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +++N  +VNI SY C+ GD+I ++ + K    +       ++ ++P +++ +   +  + 
Sbjct: 117 IVINNNTVNIPSYNCEFGDIITIRNRHKSRLIITRNINSFQKLEIPNHLNFDLTQLRGSI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +        +   LVVE+YSR
Sbjct: 177 NQ---RIDYNSISFKINELLVVEYYSR 200


>gi|62288929|sp|P69635|RR4_BRAPI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288930|sp|P69636|RR4_BRASY RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439924|emb|CAA82429.1| ribosomal protein S4 [Brachypodium pinnatum]
 gi|439926|emb|CAA82430.1| ribosomal protein S4 [Brachypodium sylvaticum]
          Length = 196

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMAATIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +  + V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSQSLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|67036110|gb|AAY62981.1| small ribosomal protein subunit 4 [Chrysohypnum diminutivum]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQATSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|183601528|ref|ZP_02962898.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683934|ref|YP_002470317.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190973|ref|YP_002968367.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196379|ref|YP_002969934.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|259495270|sp|B8DUR2|RS4_BIFA0 RecName: Full=30S ribosomal protein S4
 gi|183219134|gb|EDT89775.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621584|gb|ACL29741.1| ribosomal protein S4 [Bifidobacterium animalis subsp. lactis AD011]
 gi|240249365|gb|ACS46305.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250933|gb|ACS47872.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793962|gb|ADG33497.1| 30S ribosomal protein S4 [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 206

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS R   + ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++ 
Sbjct: 1   MSNRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRAESDYAVRLREKQRLRA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+ R+ +++   + G T + +++ LE+RLD +V RA    T   ARQFV HRH
Sbjct: 61  QYG-ISEKQLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGIARTTAQARQFVVHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176
           +LV+G  V+  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ 
Sbjct: 120 ILVDGNIVDRPSYRVKPGQTIQVKPKSQTMVPFQIAAEGTHRDVLPPVPGYLDVNLASLK 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           AT  R P   +    PV +    VVEFY+R
Sbjct: 180 ATLTRKPEPEE---IPVQVNIQYVVEFYAR 206


>gi|92417443|gb|ABE76817.1| ribosomal protein subunit 4 [Notothylas orbicularis]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKTPHVKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDCITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|67035986|gb|AAY62919.1| small ribosomal protein subunit 4 [Meteoriopsis reclinata]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63191704|gb|AAY34813.1| small ribosomal protein subunit 4 [Orthomnion elimbatum]
          Length = 200

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +
Sbjct: 117 VNDRLVDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 177 ILDRN---SIDLKINELLVVEYYSR 198


>gi|42527448|ref|NP_972546.1| 30S ribosomal protein S4 [Treponema denticola ATCC 35405]
 gi|61215636|sp|Q73LC2|RS4_TREDE RecName: Full=30S ribosomal protein S4
 gi|41818033|gb|AAS12457.1| ribosomal protein S4 [Treponema denticola ATCC 35405]
 gi|325473706|gb|EGC76895.1| 30S ribosomal protein S4 [Treponema denticola F0402]
          Length = 206

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 7/203 (3%)

Query: 7   SKHKIDRRIGENLWGRPK--SPVNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
            K K  RR+G N++G PK    ++ +  GPG   G R++ K S +G QL+ KQK +  YG
Sbjct: 6   PKGKTVRRLGVNIYGNPKYDKLLDRKPNGPGKERGARKRGKTSVYGEQLKEKQKFRFAYG 65

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ISE++FR+++K+A R  G T  N+IS +E RLD  +YR  F  +   ARQ V H +  +
Sbjct: 66  -ISERQFRNLYKKASRMPGVTGDNMISLMEQRLDNTIYRMGFAISRAQARQMVTHAYFFI 124

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183
           NG+ VNI S      DVI  K K      +      ++     +++++ + + AT   +P
Sbjct: 125 NGKPVNIPSMCVSVNDVITTKNKKGIQNLIRHNMSTSQSARGSWLTIDDEKLSATVNILP 184

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            +    P         VVE+YSR
Sbjct: 185 VTTDIQPVG---NIQNVVEYYSR 204


>gi|322719567|gb|ADX07720.1| small ribosomal protein subunit 4 [Schistidium rivulare]
          Length = 198

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|93213404|gb|ABF01128.1| ribosomal protein subunit 4 [Hypnum cupressiforme]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L+
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|14276324|gb|AAK58200.1| small ribosomal protein 4 [Helicophyllum torquatum]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ YYG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 117 NNRVVDIPSYRCKPQDFITIKNRQKSQVVISKNIDFYQKFKIPNHLTYNSLENKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LNRESIGLKINELLVVEYYSR 197


>gi|67035783|gb|AAY62822.1| small ribosomal protein subunit 4 [Dendroalsia abietina]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEISLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K +    A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRTSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63101035|gb|AAY33142.1| small ribosomal protein 4 [Lepyrodon tomentosus]
          Length = 199

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A R++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARRAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|548873|sp|P36467|RR4_PENVI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439962|emb|CAA82446.1| ribosomal protein S4 [Pennisetum villosum]
          Length = 196

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFNSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++  ++P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPANLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKVNELLVVEY 196


>gi|328541120|gb|AEB21784.1| ribosomal protein S4 [Psiloclada clandestina]
          Length = 198

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K+ RR+G       +   +  SY           K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKVIRRLGALPGLTNRILESKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N
Sbjct: 57  LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY C+ GD+I +K K K  + +     L +   +P +++ +   +  +  +  
Sbjct: 117 NNIVDIPSYNCEPGDIITIKDKQKSQSVITRNINLFQNLKIPSHLTFDSIKLCGSINQTI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWINLKINELLVVEYYSR 196


>gi|323404250|gb|ADX62379.1| small ribosomal protein subunit 4 [Grimmia cribrosa]
          Length = 198

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K    +++    +++  +P +++ N         +I 
Sbjct: 117 NRVVNIPSYRCKSQDFITIKDRQKSQTMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|24473816|gb|AAL82751.1| small ribosomal subunit protein 4 [Bryum pungens]
          Length = 199

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I  K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITTKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|312897333|ref|ZP_07756759.1| ribosomal protein S4 [Megasphaera micronuciformis F0359]
 gi|310621551|gb|EFQ05085.1| ribosomal protein S4 [Megasphaera micronuciformis F0359]
          Length = 195

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R  ++ K  RR G N++G PK+    +         +R+ K S +G QL  KQK++ 
Sbjct: 1   MATRREARFKQCRRFGVNVYGHPKALKRVKK-------DQRQKKMSEYGTQLLEKQKLRA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY ++ E++F   + +A +  G T  N++  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 54  YY-NLLERQFVRYYDKAKKQEGVTGENMLKLLECRLDNLVYRIGFANSIRQARQMVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LV+G+ V+I S + K G  I +K+ S+      ++ Q  +     YI  N D    T  
Sbjct: 113 ILVDGKRVDIPSAQVKVGSTITLKEGSRNNEMYKKSFQEVKTFDLPYIEKNFDAFEGTLT 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ +   L+VE YS+
Sbjct: 173 RMPERSE---LPLEINETLIVELYSK 195


>gi|253795707|ref|YP_003038803.1| 30S ribosomal subunit protein S4 [Candidatus Hodgkinia cicadicola
           Dsem]
 gi|253740015|gb|ACT34350.1| 30S ribosomal subunit protein S4 [Candidatus Hodgkinia cicadicola
           Dsem]
          Length = 207

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 89/205 (43%), Positives = 124/205 (60%), Gaps = 1/205 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++R   K K DRR+GE+LWG  +S VN     PG HG + +S  S + ++L AKQK+K 
Sbjct: 1   MNRRLRPKFKFDRRVGESLWGVSRSSVNRVPTAPGQHGYKTRSSVSEYAIRLTAKQKLKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +++E K    +K A + RGD +HNL+  LE RLD +VYRA+   +  AARQ ++H H
Sbjct: 61  YYSNLTESKLVKAYKTALKYRGDVAHNLVRVLERRLDVLVYRARLAASFRAARQLISHGH 120

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           VLVN   V+I S+ CK GDV  V       A V EA    ER VP +IS +  ++  T V
Sbjct: 121 VLVNNSKVDICSFECKPGDVFRVAPCFVNAAVVKEAVLGCERSVPNHISCDFKHLKFTLV 180

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           + P++   + +PV M P LV E+YS
Sbjct: 181 KPPAACGAL-FPVAMCPELVAEYYS 204


>gi|49182752|gb|AAT57838.1| small ribosomal protein [Nardia insecta]
 gi|49182764|gb|AAT57844.1| small ribosomal protein [Nardia scalaris]
          Length = 195

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|67035787|gb|AAY62824.1| small ribosomal protein subunit 4 [Meteorium illecebrum]
          Length = 199

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|313887983|ref|ZP_07821661.1| ribosomal protein S4 [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845938|gb|EFR33321.1| ribosomal protein S4 [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 198

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 10/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    K K  RR+G N+ G PK+              R   K + +G QL  KQ+++ 
Sbjct: 1   MAKMMDPKFKQSRRLGLNVCGHPKAMKRATRGT-----ARSDKKLTEYGKQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F ++FKEA R++G T  NL++FLE+RLD++ YR  F  +I  ARQ V+H H
Sbjct: 56  YYGVL-EKQFVNLFKEAQRTQGQTGPNLVTFLETRLDSLCYRMGFASSIRQARQMVSHCH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SYRC+ GDVI +  K +++    E           YIS + D   AT V
Sbjct: 115 LTVNGKKVNIPSYRCQAGDVIALSAKGRKVDLFKENYNTNIVVNYPYISKDED-FKATLV 173

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+       P+ ++  L+VEFYS+
Sbjct: 174 SLPNR---EDIPIEIEDQLIVEFYSK 196


>gi|67035899|gb|AAY62876.1| small ribosomal protein subunit 4 [Eriodon conostomus]
 gi|67035903|gb|AAY62878.1| small ribosomal protein subunit 4 [Drepanocladus aduncus]
 gi|67035909|gb|AAY62881.1| small ribosomal protein subunit 4 [Cratoneuropsis relaxa]
 gi|67035911|gb|AAY62882.1| small ribosomal protein subunit 4 [Hypnobartlettia fontana]
          Length = 199

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67036080|gb|AAY62966.1| small ribosomal protein subunit 4 [Camptochaete arbuscula]
          Length = 198

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|119025715|ref|YP_909560.1| 30S ribosomal protein S4 [Bifidobacterium adolescentis ATCC 15703]
 gi|154487466|ref|ZP_02028873.1| hypothetical protein BIFADO_01319 [Bifidobacterium adolescentis
           L2-32]
 gi|152060937|sp|A1A195|RS4_BIFAA RecName: Full=30S ribosomal protein S4
 gi|118765299|dbj|BAF39478.1| 30S ribosomal protein S4 [Bifidobacterium adolescentis ATCC 15703]
 gi|154083984|gb|EDN83029.1| hypothetical protein BIFADO_01319 [Bifidobacterium adolescentis
           L2-32]
          Length = 208

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T + +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQAAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           + +    PV +    VVEFY+R
Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208


>gi|222103510|gb|ACM44284.1| small ribosomal protein subunit 4 [Ptilium crista-castrensis]
          Length = 203

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    +    +  ++ ++P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIINRNIEFYQKSEIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|63078575|gb|AAY29374.1| ribosomal protein S4 [Hyophila involuta]
          Length = 197

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S+    +      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYIRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +     ++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSIIPNHLTFNFLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|49182754|gb|AAT57839.1| small ribosomal protein [Marsupella aquatica]
          Length = 195

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIELRGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|67035988|gb|AAY62920.1| small ribosomal protein subunit 4 [Neodicladiella pendula]
          Length = 199

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|116010521|emb|CAL37367.1| ribosomal protein S4 [Syringa vulgaris]
          Length = 194

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|254431650|ref|ZP_05045353.1| ribosomal protein S4 [Cyanobium sp. PCC 7001]
 gi|197626103|gb|EDY38662.1| ribosomal protein S4 [Cyanobium sp. PCC 7001]
          Length = 188

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G+      KS    RSY PG HGQ R+ +  Y  ++L  KQK++  YG ISE++     
Sbjct: 1   MGDLPGLTRKSA--KRSYPPGQHGQARRKRSEY-AIRLEEKQKLRFNYG-ISERQLVRYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           K+A    G +  NL+  LE+RLD I +R  F PT+  ARQ VNH HV VNGR V+I SY+
Sbjct: 57  KKARAQGGSSGTNLLKLLENRLDNICFRLGFGPTVPGARQLVNHGHVTVNGRVVDIASYQ 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK GDV+ ++++ +         +     ++P ++ ++   + A  +      +     +
Sbjct: 117 CKPGDVVAIRERKQSKKLAEGNLEFPGLANIPPHLELDKAKLSAKVIS---KCEREWVAL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVEFYSR
Sbjct: 174 EINELLVVEFYSR 186


>gi|3914840|sp|O19992|RR4_BOBGL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292744|emb|CAA92565.1| ribosomal protein S4 [Bobartia gladiata]
          Length = 194

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A + +  +     ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQDYTASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|26399188|sp|Q9M4C0|RR4_HAPHO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|8017362|emb|CAB92130.1| small ribosomal protein 4 [Haplomitrium hookeri]
          Length = 202

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G +L G     + ++          +K   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRMKIIRRLG-SLPGLTNKVLRSKPGYTDQLISNKK--VSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T + L+  LE RLD +++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRIARKAKGSTGNVLLQLLEMRLDNVIFRLGMSSTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +++N   V+   Y CK  D+I +K  S+  + + +    ++R   P ++  +    V   
Sbjct: 117 IMINDEMVDTPGYNCKPRDIITLKNISESRSGIPKGIDSSQRSRTPNHLVFDSSRGVGFV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 NQIIDR---EWISLKINELLVVEYYSR 200


>gi|548870|sp|P36464|RR4_LYGSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439952|emb|CAA82443.1| ribosomal protein S4 [Lygeum spartum]
          Length = 196

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P +  +     H      K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTPKSRSNLKKKFH----SGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVQIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|67035823|gb|AAY62842.1| small ribosomal protein subunit 4 [Wijkia extenuata]
          Length = 199

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|322719515|gb|ADX07694.1| small ribosomal protein subunit 4 [Racomitrium himalayanum]
 gi|322719517|gb|ADX07695.1| small ribosomal protein subunit 4 [Racomitrium himalayanum]
 gi|322719519|gb|ADX07696.1| small ribosomal protein subunit 4 [Racomitrium himalayanum]
          Length = 198

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NHIVNIPSYRCKPQDFITIKDRQKSQAMIMKNIYFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|46811056|gb|AAT01846.1| small ribosomal protein 4 [Symphyogyna hymenophyllum]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG +
Sbjct: 1   GPRAKIIRRLGA-LPGLSHEMIGSRSGYTNQLAANKK--ISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH++VN 
Sbjct: 57  TERQLLKYVRIARGAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184
            +V+I SY CK  DVI ++ + +  + + +   L  ER +P +++ +      +  +I  
Sbjct: 117 DTVDIPSYNCKPQDVITIRDRRESQSVITKNINLFRERRIPNHLTFDSTRFCGSVNQIID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWIGLKINELLVVEYYSR 195


>gi|308235918|ref|ZP_07666655.1| 30S ribosomal protein S4 [Gardnerella vaginalis ATCC 14018]
 gi|311114983|ref|YP_003986204.1| 30S ribosomal protein S4 [Gardnerella vaginalis ATCC 14019]
 gi|310946477|gb|ADP39181.1| 30S ribosomal protein S4 [Gardnerella vaginalis ATCC 14019]
          Length = 208

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG +SEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-LSEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T   +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNLV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+V+ KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV +    VVE+Y+R
Sbjct: 190 VDQ---IPVEVNIQYVVEYYAR 208


>gi|3914850|sp|O20221|RR4_GLAPA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292884|emb|CAA92554.1| ribosomal protein S4 [Gladiolus papilio]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 10/201 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WIGLKINELLVVEYYSR 193


>gi|86438910|emb|CAJ55427.1| small ribosomal protein 4 [Plagiochila fruticella]
          Length = 194

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGVLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+H+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHKHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWLILKINELLVVEYYSR 193


>gi|222103532|gb|ACM44295.1| small ribosomal protein subunit 4 [Gollania varians]
          Length = 203

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 2   MSPVRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 59  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +        
Sbjct: 118 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 178 NQI---LDRESIGLKINELLVVEYYSR 201


>gi|156618909|ref|YP_001430045.1| ribosomal protein S4 [Cuscuta gronovii]
 gi|171769771|sp|A7M903|RR4_CUSGR RecName: Full=Plastid 30S ribosomal protein S4
 gi|156555947|emb|CAM98331.1| ribosomal protein S4 [Cuscuta gronovii]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 13/207 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KSP   R          R    S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKSPRAIRDL--------RNQSRSEYRIRLEEKQKLRF 52

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+  +  + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 53  HYG-LTEKQLINYVRIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRH 111

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNGR V+  SYRCK  D+I  K  +K    V  + QL   +++  ++++         
Sbjct: 112 VLVNGRLVDRPSYRCKPRDIIMPKNTTKSGVLVQNSLQLFTGKELATHLNLFSTPYKGLV 171

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195


>gi|300741583|ref|ZP_07071604.1| ribosomal protein S4 [Rothia dentocariosa M567]
 gi|311113677|ref|YP_003984899.1| 30S ribosomal protein S4 [Rothia dentocariosa ATCC 17931]
 gi|300380768|gb|EFJ77330.1| ribosomal protein S4 [Rothia dentocariosa M567]
 gi|310945171|gb|ADP41465.1| 30S ribosomal protein S4 [Rothia dentocariosa ATCC 17931]
          Length = 210

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 10/212 (4%)

Query: 1   MSK--RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K  R     +  R +G  L  + +  +  R YGPG HG+ RK   S +  QL+ KQ++
Sbjct: 1   MAKNNRTRRTVRQSRALGIALTPKAEKYLERRPYGPGQHGRARKKADSNYATQLKEKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y +I E + R  + EA R  G T  NL+  LE+RLD +V R+ F  TI  ARQ V H
Sbjct: 61  RAQY-NIREAQMRRAYLEAKRVEGQTGKNLVEHLETRLDALVLRSGFARTIAQARQMVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYISVNHDN 174
           RH++V+G  V+  S+R K G +I V  KS++      A+    +    +VP Y++V  + 
Sbjct: 120 RHIMVDGVRVDRPSFRVKPGQLIHVHPKSEKTTPFQVAAAGENQAVLPEVPAYLNVEIEK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A   R P   +    PV+    LVVE+YSR
Sbjct: 180 LHAKLERAPKREE---IPVVCDEQLVVEYYSR 208


>gi|77862561|gb|ABB04553.1| small ribosomal protein 4 [Targionia hypophylla]
          Length = 201

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGALPGLINKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK  D+I +K + K  + + +     ++  +P ++ ++   +     
Sbjct: 117 LLNNNIVDIPSYNCKPKDIITIKDRQKSQSIITKNLNSFQKQKIPNHLILDLMQIKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +           + +   LVVE+YSR
Sbjct: 177 QTIDR---EWIYLKINELLVVEYYSR 199


>gi|328541038|gb|AEB21743.1| ribosomal protein S4 [Megalembidium insulanum]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K       Y           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T    +  LE R D  + R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I +++K K  + +     L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCEPGDIITIREKQKSQSVITRNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWIDLKINELLVVEYYSR 195


>gi|49182669|gb|AAT57797.1| small ribosomal protein [Anthelia julacea]
          Length = 195

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+   E RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K    + +   L ++  +P ++  +   +     +  +  
Sbjct: 117 VDIPSYNCQPGDIITVKNKQKSQLIIAKNINLFQKLKIPSHLIFDFTELRGVVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|67035972|gb|AAY62912.1| small ribosomal protein subunit 4 [Homalia trichomanoides]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035811|gb|AAY62836.1| small ribosomal protein subunit 4 [Fabronia pusilla]
          Length = 198

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEVIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLTINELLVVEYYSR 196


>gi|322719543|gb|ADX07708.1| small ribosomal protein subunit 4 [Grimmia unicolor]
 gi|322719545|gb|ADX07709.1| small ribosomal protein subunit 4 [Grimmia longirostris]
 gi|322719547|gb|ADX07710.1| small ribosomal protein subunit 4 [Grimmia longirostris]
 gi|322719549|gb|ADX07711.1| small ribosomal protein subunit 4 [Grimmia longirostris]
 gi|322719551|gb|ADX07712.1| small ribosomal protein subunit 4 [Grimmia longirostris]
 gi|322719553|gb|ADX07713.1| small ribosomal protein subunit 4 [Grimmia donniana]
          Length = 198

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD ++++    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFQLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + +  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQESQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|283782865|ref|YP_003373619.1| ribosomal protein S4 [Gardnerella vaginalis 409-05]
 gi|297242860|ref|ZP_06926798.1| ribosomal protein S4 [Gardnerella vaginalis AMD]
 gi|283442009|gb|ADB14475.1| ribosomal protein S4 [Gardnerella vaginalis 409-05]
 gi|296889071|gb|EFH27805.1| ribosomal protein S4 [Gardnerella vaginalis AMD]
          Length = 208

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T   +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNLV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+V+ KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV +    VVE+Y+R
Sbjct: 190 VDQ---IPVEVNIQYVVEYYAR 208


>gi|157689434|gb|ABV65273.1| ribosomal protein S4 [Cannabis sativa]
          Length = 198

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 10/204 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRFKKIRRLGALPGLTSKKP----RAGSDLRNQLRPGKKSQYRIRLEEKQKLRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 56  LTEEQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQ-KSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
            R V+I SYRCK  D+I V+  + K  + V      + R ++P+++++N      +  +I
Sbjct: 116 NRMVDIPSYRCKPRDIITVRDEQKKSKSLVQNYLDSSIREELPKHLTLNPFQYQGSVNQI 175

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             S       + +   LVVE+YSR
Sbjct: 176 IDSK---WVGLKINELLVVEYYSR 196


>gi|78369613|gb|ABB43036.1| ribosomal protein 4 [Syrrhopodon involutus]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++ +   ++   P +++ N         +I
Sbjct: 117 NNHMVNIPSYQCKPQDFITIKDQQKYQTMIIKNTNFFSKHKTPNHLTFNSVEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|93213408|gb|ABF01130.1| ribosomal protein subunit 4 [Stereophyllum radiculosum]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63191720|gb|AAY34820.1| small ribosomal protein subunit 4 [Mniomalia semilimbata]
          Length = 198

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGVLPGLTNKTPQLNSST---INTSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKDQQKFQTIISKNIDFYQKSKIPNHLTYNSLTKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196


>gi|167767777|ref|ZP_02439830.1| hypothetical protein CLOSS21_02312 [Clostridium sp. SS2/1]
 gi|317497068|ref|ZP_07955395.1| ribosomal protein S4 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710516|gb|EDS21095.1| hypothetical protein CLOSS21_02312 [Clostridium sp. SS2/1]
 gi|291558882|emb|CBL37682.1| SSU ribosomal protein S4P [butyrate-producing bacterium SSC/2]
 gi|316895613|gb|EFV17768.1| ribosomal protein S4 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R +G +         + RS        R   K S +GLQL  KQK K 
Sbjct: 1   MAVDRTPVLKRCRSLGLDPVFLGIDKKSNRSL------NRANRKKSEYGLQLCEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A+R +G T  NL++ LE RLD +++R  +  T    RQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKAERMKGQTGTNLMTLLELRLDNVLFRLGYGRTRKECRQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY+ K GDVIE+K+K +      E  ++ E R +P ++  +HDN   T 
Sbjct: 114 VLVNGKQVNIPSYQVKAGDVIEIKEKHRTSPRYKEILEVTEGRMIPSWLEADHDNFTGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +PS  +     V +   L+VE YS+
Sbjct: 174 KELPSRDE---IDVPVNETLIVELYSK 197


>gi|42556452|gb|AAS19821.1| small ribosomal protein 4 [Lophozia ventricosa]
          Length = 191

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNLNLFQKMKIPSHLTFDSTKLQGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|289178715|gb|ADC85961.1| SSU ribosomal protein S4P [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 239

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS R   + ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++ 
Sbjct: 34  MSNRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRAESDYAVRLREKQRLRA 93

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+ R+ +++   + G T + +++ LE+RLD +V RA    T   ARQFV HRH
Sbjct: 94  QYG-ISEKQLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGIARTTAQARQFVVHRH 152

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176
           +LV+G  V+  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ 
Sbjct: 153 ILVDGNIVDRPSYRVKPGQTIQVKPKSQTMVPFQIAAEGTHRDVLPPVPGYLDVNLASLK 212

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           AT  R P   +    PV +    VVEFY+R
Sbjct: 213 ATLTRKPEPEE---IPVQVNIQYVVEFYAR 239


>gi|67036094|gb|AAY62973.1| small ribosomal protein subunit 4 [Platylomella lescurii]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLXKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|222103434|gb|ACM44246.1| small ribosomal protein subunit 4 [Trachycystis microphylla]
 gi|222103454|gb|ACM44256.1| small ribosomal protein subunit 4 [Trachycystis microphylla]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGVLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I  
Sbjct: 117 RLVDIPSYRCKPQDFIAIKDRQKSQTIISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIDLKINELLVVEYYSR 195


>gi|37992557|gb|AAR06457.1| small ribosomal protein 4 [Hookeria lucens]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+ V
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A + +  +  ++   P +++ +         RI
Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|6002094|emb|CAA58956.1| ribosomal protein S4 [Zizania latifolia]
          Length = 196

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196


>gi|62288944|sp|P69650|RR4_SETVI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288948|sp|P69654|RR4_TRIRO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439968|emb|CAA82449.1| ribosomal protein S4 [Setaria viridis]
 gi|440142|emb|CAA82458.1| ribosomal protein S4 [Melinis repens]
          Length = 196

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKVNELLVVEY 196


>gi|322719507|gb|ADX07690.1| small ribosomal protein subunit 4 [Codriophorus fascicularis]
 gi|322719511|gb|ADX07692.1| small ribosomal protein subunit 4 [Codriophorus fascicularis]
 gi|322719513|gb|ADX07693.1| small ribosomal protein subunit 4 [Codriophorus fascicularis]
          Length = 198

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNIYFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|49182750|gb|AAT57837.1| small ribosomal protein [marchantiophyte contaminant]
          Length = 195

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKPKSSY---IDRSISNKKVSQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINSDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K    V +   L ++  +P +++++   +     +  +  
Sbjct: 117 VDIPSYNCEPGDIITVKTKQKSQLIVTKNINLFQKLKIPSHLTLDSTELRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIDLKINELLVVEYYSR 193


>gi|3098164|gb|AAC15530.1| small ribosomal protein 4 [Plagiobryum donianum]
 gi|27227939|gb|AAN85767.1| ribosomal protein subunit 4 [Bryum preissianum]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|116010495|emb|CAL37354.1| ribosomal protein S4 [Verbena officinalis]
          Length = 194

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDPRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   +VP +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRTLIQNSLNSSPPEEVPNHLTLHPIQYKGLVNQIIDSQ 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|17025834|gb|AAL32083.1| ribosomal protein 4 [Mitthyridium sp. Orban 1995]
          Length = 200

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 2   YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I
Sbjct: 118 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LDQESIGLKINELLVVEYYSR 198


>gi|12642218|gb|AAK00191.1| rps4 [Encalypta armata]
          Length = 195

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD IV+R     TI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMASTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A +++    +++  VP ++S +         +I   L
Sbjct: 117 VNIPSYRCKPQDFISIKDRQKSQAIIIKNIDFSQKSKVPNHLSFDSLQKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67035789|gb|AAY62825.1| small ribosomal protein subunit 4 [Pseudocryphaea domingensis]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035795|gb|AAY62828.1| small ribosomal protein subunit 4 [Regmatodon declinatus]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|310779569|ref|YP_003967902.1| SSU ribosomal protein S4P [Ilyobacter polytropus DSM 2926]
 gi|309748892|gb|ADO83554.1| SSU ribosomal protein S4P [Ilyobacter polytropus DSM 2926]
          Length = 195

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R   P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANRKPTEYAIQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  + EK+FR ++ EA+R  G T  NLI +LE RLD +VYR     T   ARQ V+H H
Sbjct: 56  IYS-VMEKQFRKLYAEANRRDGVTGLNLIQYLERRLDNVVYRLGIAKTRRQARQVVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SYR K GDVI V + SK +  +  A + +  + P ++ V+  +     +
Sbjct: 115 IAVNGRKVNIASYRVKVGDVISVIENSKNVEIIKSAVEAS--NAPSWLEVDKASFTGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +   L+VEFYSR
Sbjct: 173 QNPTKDD---LDFELNEALIVEFYSR 195


>gi|222103556|gb|ACM44307.1| small ribosomal protein subunit 4 [Brachythecium salebrosum]
          Length = 203

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|24473810|gb|AAL82748.1| small ribosomal subunit protein 4 [Acidodontium subrotundum]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDFITIKDQQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|49066380|gb|AAT49276.1| ribosomal protein system 4 [Orthotrichum exiguum]
          Length = 200

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 2   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N          I
Sbjct: 118 NDRIVDIPSYRCKPQDFITIKSRQKSQDIINKNIDFYQKQKIPNHLTYNSLEKKGLVNEI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LNRELIGLKINELLVVEYYSR 198


>gi|37992453|gb|AAR06405.1| small ribosomal protein 4 [Canalohypopterygium tamariscinum]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           NG  V+I SYRCK  D I +K + K  A + +  +  ++  +P ++  N  +      +I
Sbjct: 117 NGYIVDIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKYKIPNHLIYNSLDKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|157689480|gb|ABV65296.1| ribosomal protein S4 [Guaiacum officinale]
          Length = 195

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K  RR+G       K P    +       Q R  K S + ++L  KQK++ +YG +
Sbjct: 1   GPRFKKIRRLGALPGLTNKRPKARTNT----RNQSRSGKKSQYRIRLEEKQKLRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  +E RLD I++R     TI  ARQFVNHRH+LVN 
Sbjct: 56  TERQLLKYVRIARKAKGSTGQVLLQLIEMRLDNILFRLGMALTIPQARQFVNHRHILVND 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
           R VNI SYRCK  D+I V+   K    V        +++ ++++++         +I  S
Sbjct: 116 RIVNIPSYRCKPRDIITVRDDQKSRTLVQNYLDSPSQELAKHLTLHPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLRINELLVVEYYSR 193


>gi|67035785|gb|AAY62823.1| small ribosomal protein subunit 4 [Leucodon sciuroides]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIXRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|187918474|ref|YP_001884037.1| 30S ribosomal protein S4 [Borrelia hermsii DAH]
 gi|226697809|sp|B2S0W1|RS4_BORHD RecName: Full=30S ribosomal protein S4
 gi|119861322|gb|AAX17117.1| SSU ribosomal protein S4P [Borrelia hermsii DAH]
          Length = 208

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 121/210 (57%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+++  +K K+ RR G N++ +PK    +  +   PG+HG+ R++K + +G QL  KQK+
Sbjct: 1   MNRKNIAKGKLVRRFGINIFEQPKYDKLLKKKPNPPGMHGRSRRAKITEYGKQLIEKQKV 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG ISE++  +IFKEA R  G T  NL++ LE R+D +VYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-ISERQLTNIFKEARRQHGVTGDNLLALLERRIDNVVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176
             +++NGR V I S   +  D+I+VK+K      V    +     R +P +I VN D++ 
Sbjct: 120 GIIMLNGRRVTIPSITLRANDIIQVKEKDSLKKLVRSNIEKTSTLRKLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               R PS  +    P +    ++VE+YS+
Sbjct: 180 VKITRPPSRDE---IPTLANEQMIVEYYSK 206


>gi|83416512|gb|ABC18276.1| small ribosomal subunit protein 4 [Bryum bicolor]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|46486586|gb|AAS98729.1| ribosomal protein subunit 4 [Rutenbergia madagassa]
          Length = 200

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +
Sbjct: 117 VNDYIVDIPSYRCKPQDFITIKNQRKYEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDSESIGLKINELLVVEYYSR 198


>gi|46811030|gb|AAT01833.1| small ribosomal protein 4 [Moerckia blyttii]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G  L G     + + S         RK   S + ++   KQK++ +YG +
Sbjct: 1   GPRAKIIRRLGA-LPGLSNGMLGSGSSYTNQSTANRK--ISQYRIRSEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A R++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVRIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILIND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPS 184
            +V+I SY C+  DVI ++ + +    +     L++ + +P +++++      +  ++  
Sbjct: 117 DTVDIPSYSCEPKDVITIRDRQESRLIIARNMDLSQGQKIPNHLTLDSTQFRGSVDQVID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWIDLKINELLVVEYYSR 195


>gi|17025855|gb|AAL32093.1| ribosomal protein 4 [Mitthyridium sp. Wall 3864]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I
Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|67035917|gb|AAY62885.1| small ribosomal protein subunit 4 [Campyliadelphus stellatus]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|3914847|sp|O20213|RR4_FURGI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292864|emb|CAA92564.1| ribosomal protein S4 [Furcraea gigantea]
          Length = 194

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L    R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGTLPGLTSKRP----RSGSDLKNPLRSVKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR 
Sbjct: 56  RQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDSFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|330837631|ref|YP_004412272.1| 30S ribosomal protein S4P [Spirochaeta coccoides DSM 17374]
 gi|329749534|gb|AEC02890.1| SSU ribosomal protein S4P [Spirochaeta coccoides DSM 17374]
          Length = 215

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/217 (35%), Positives = 107/217 (49%), Gaps = 13/217 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSP----------VNTRSYGPGLHGQRRKSKPSYFGL 50
           M++    K+K  R     L  R +               R   PG   + R  K + +G+
Sbjct: 1   MARYTGPKYKHVRADKARLVARGEKTDTHPAARRPGQKHRDSLPGKDPKARTKKMTDYGM 60

Query: 51  QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
           QLR KQ +K  Y ++ EK+FR  F EA R  G T  NLI  LE RLD +VYR  F  T  
Sbjct: 61  QLREKQHLKWTY-EMLEKQFRKTFDEAARIPGKTGENLIVLLERRLDNVVYRLHFASTRR 119

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYIS 169
            A Q V+H HV VNG  VNI SYR K+GDVI +  + +++  + E   +     V  ++S
Sbjct: 120 QASQLVSHGHVFVNGSRVNIRSYRLKDGDVISIGSRGQKMNLIKENLTEYTRAGVAPWLS 179

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ D M  TF+  P    D+     +   L+VE YSR
Sbjct: 180 LDPDAMKGTFIIAPKR-SDISELADVNEQLIVELYSR 215


>gi|269114854|ref|YP_003302617.1| 30S ribosomal protein S4 [Mycoplasma hominis]
 gi|268322479|emb|CAX37214.1| 30S ribosomal protein S4 [Mycoplasma hominis ATCC 23114]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MSK   S  K  RR G +L    K  +    R+  PG HG +R  KPS + L +  KQK+
Sbjct: 1   MSKFVGSMFKKSRRYGISLLENNKEFTKGKKRTTAPGQHGAKRS-KPSDYQLHMYEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG ++E++F+++F +  +  G T  NL+  +ESRLD +V+RA F  T   ARQ VNH
Sbjct: 60  RYMYG-LNERQFKNLFIKVSKKAGVTGINLLQTVESRLDNLVFRAGFARTRAQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  V+G   NI S   K G VIE+K+  +   ++ +A ++    V  +++   +N   T
Sbjct: 119 GHFTVDGCKANIPSMIVKVGSVIELKEALQNNVAIKDAIEVM--TVAPWLT--KENFKVT 174

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F R+P   +   +   +  +L+VE+Y+R
Sbjct: 175 FTRLPERNE---FAKDINESLIVEYYNR 199


>gi|67036084|gb|AAY62968.1| small ribosomal protein subunit 4 [Pilotrichella flexilis]
          Length = 199

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|3914864|sp|O20291|RR4_TRISA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2293101|emb|CAA92562.1| ribosomal protein S4 [Trimezia stayermarkii]
          Length = 194

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +    +       +  ++P +++++         +I    
Sbjct: 116 VDIPSYRCKPQDIITTKDKERSKVLIQNYIASSSHEELPNHLTIDPLQYKGLVNQIIDRK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|315320559|ref|YP_004072616.1| 30S ribosomal protein S4 [Thalassiosira oceanica CCMP1005]
 gi|283569032|gb|ADB27569.1| 30S ribosomal protein S4 [Thalassiosira oceanica CCMP1005]
          Length = 205

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 10/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR---RKSKPSYFGLQLRAKQK 57
           MS+    K +I RR+G+      K+    ++  PG HG+     K K + +GL+L  KQK
Sbjct: 1   MSRYRGPKLRITRRLGKLPGLTQKTS--KKTARPGQHGKTLGDGKKKTTEYGLRLEEKQK 58

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +K  YG I+E +     KEA R +G T   L+  LE RLDTI +   F PTI AARQ VN
Sbjct: 59  LKFNYG-ITESQLYHYIKEARRRKGVTGLILLQLLEMRLDTICFSLGFAPTIAAARQIVN 117

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176
           H H+ VN + V+I S++C+  DVI VK KS     +    +     + P ++ ++   + 
Sbjct: 118 HGHITVNNKVVDIPSFQCQINDVIGVKAKSTSKNIIENNIKTINFIEPPTHLILDKSKLE 177

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T        + +     +    V+E+YSR
Sbjct: 178 GTVKNYCDRNELLLDLNELL---VIEYYSR 204


>gi|322719571|gb|ADX07722.1| small ribosomal protein subunit 4 [Grimmia elongata]
          Length = 198

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSASNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAIIIKNMNFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|229817706|ref|ZP_04447988.1| hypothetical protein BIFANG_02978 [Bifidobacterium angulatum DSM
           20098]
 gi|229785495|gb|EEP21609.1| hypothetical protein BIFANG_02978 [Bifidobacterium angulatum DSM
           20098]
          Length = 208

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG +SEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-LSEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+++++  ++ G T + ++  LE RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAVYEKGTKTSGQTGNAMLQDLEVRLDNLVLRAGFARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           N  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 NRPSYRVKPGQTIQVKAKSQTMEPFQAAAEGVHRDVLPPVPGYLDVNLASLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           + +    P  +    VVEFY+R
Sbjct: 190 AEE---VPAQVNIQYVVEFYAR 208


>gi|153937935|ref|YP_001392762.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland]
 gi|171769264|sp|A7GJ02|RS4B_CLOBL RecName: Full=30S ribosomal protein S4 B
 gi|152933831|gb|ABS39329.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland]
 gi|295320741|gb|ADG01119.1| 30S ribosomal protein S4 [Clostridium botulinum F str. 230613]
          Length = 197

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD I YR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIAYRIGFANSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  VNI SY  K GDVI +++K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNGSKVNIPSYEVKAGDVITLREKYRKNDEFADNFLSLKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197


>gi|67035803|gb|AAY62832.1| small ribosomal protein subunit 4 [Orthostichidium involutifolium]
          Length = 199

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NSCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|46486578|gb|AAS98725.1| ribosomal protein subunit 4 [Mniodendron dendroides]
          Length = 199

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S+   ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTAQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ ++        +I
Sbjct: 117 NDRLVDIPSYRCKPQDFITIKNRQKSQAIISKNLDFYQKYKIPNHLTYSYLEKKGFVTQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|46486548|gb|AAS98710.1| ribosomal protein subunit 4 [Sciadocladus menziesii]
          Length = 197

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + + +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFSQKYKIPNHLTYNSLEKKGFVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|548877|sp|P36473|RR4_TRARA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439972|emb|CAA82451.1| ribosomal protein S4 [Tragus racemosus]
          Length = 196

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD IV+R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKKSTGQVLLQLLEMRLDNIVFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 QKILDRK---WVGLKINELLVVEY 196


>gi|46811062|gb|AAT01849.1| small ribosomal protein 4 [Verdoornia succulenta]
          Length = 195

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+P +   +   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRTKVIRRLGTLPGLTDKTPKSRLGH---IDRATSNRKISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++       A +++G T   L+  LE RLD  ++R   V TI AARQFVNH HV +NG
Sbjct: 57  TERQLLKYVCIARKAKGSTGQMLLQSLEMRLDNTIFRLGMVATIPAARQFVNHGHVSING 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
             VNI SY CK GD+I +K + K    V   + L + ++P +++++   ++ +  ++   
Sbjct: 117 SRVNIPSYNCKPGDIITMKNQEKSR-LVRNMNLLQKPELPNHLTLDSVQLIGSVNQMIER 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 A---WIDLKINELLVVEYYSR 193


>gi|160946867|ref|ZP_02094070.1| hypothetical protein PEPMIC_00828 [Parvimonas micra ATCC 33270]
 gi|158447251|gb|EDP24246.1| hypothetical protein PEPMIC_00828 [Parvimonas micra ATCC 33270]
          Length = 216

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K  RR+G N+ G PK+         G    R   K + +GLQL  KQ+++ 
Sbjct: 18  MAKMMGPRFKQSRRLGLNVCGHPKANKRM-----GKGLARNDKKLTEYGLQLLEKQRLRA 72

Query: 61  YYGDISEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
           YYG + EK+FR+  ++A R +   T   L+  LE+RLD +VYR  F  +I  ARQ V H 
Sbjct: 73  YYG-VMEKQFRTYVEKALRQKERITGDALVMMLETRLDNLVYRMGFASSIRQARQMVVHG 131

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LVNG+ V+I SY  + GD I +++KS+++    E  +     V  YI    + + AT 
Sbjct: 132 HMLVNGKKVDIPSYAVQVGDEITLREKSQKVEMFKENFESTFLGVVPYIE-KKEGLKATL 190

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +    P+ +Q +LVVEFYSR
Sbjct: 191 TRMPERDE---VPIEIQDSLVVEFYSR 214


>gi|291521873|emb|CBK80166.1| SSU ribosomal protein S4P [Coprococcus catus GD/7]
          Length = 197

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +        V+ +S    + G R+KS+   +G QLR KQK K 
Sbjct: 1   MAREMVPVLKRCRSLGLDPLYLG---VDKKSNRQSIRGNRKKSE---YGNQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ F +A + +G T  NL+  LE RLD I++R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYFAKASQMKGQTGENLMVMLECRLDNIIFRLGFARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           V VNG+ VNI SY+ K GDV+E+++K K      +  ++A  R VPE++  + +N+    
Sbjct: 114 VSVNGKLVNIPSYQVKPGDVVEIREKFKTSQRYKDILEMAGGRMVPEWLEADQENLKGEV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +     V +   L+VE YS+
Sbjct: 174 KALPLREQ---IDVPVDEMLIVELYSK 197


>gi|62288925|sp|P69631|RR4_ANDIS RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288947|sp|P69653|RR4_TRIDA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439914|emb|CAA82426.1| ribosomal protein S4 [Bothriochloa ischaemum]
 gi|439970|emb|CAA82452.1| ribosomal protein S4 [Tripsacum dactyloides]
          Length = 196

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V      ++   +P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196


>gi|46486550|gb|AAS98711.1| ribosomal protein subunit 4 [Mniodendron comatulum]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S+   ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTAQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ ++        +I
Sbjct: 117 NDRLVDIPSYRCKPQDFITIKNRQKSQAIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|3914858|sp|O20264|RR4_MORST RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292950|emb|CAA92556.1| ribosomal protein S4 [Moraea spathulata]
          Length = 194

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           ++I SYRCK  D+I  K K +  A +        + ++P +++++         +I  S 
Sbjct: 116 MDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPQEELPNHLTIDPIQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|322719555|gb|ADX07714.1| small ribosomal protein subunit 4 [Schistidium apocarpum]
 gi|322719557|gb|ADX07715.1| small ribosomal protein subunit 4 [Schistidium apocarpum]
          Length = 198

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMNFSQKYKIPNHLTFNSLENKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|157689460|gb|ABV65286.1| ribosomal protein S4 [Cupaniopsis anacardioides]
          Length = 196

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K  RR+        K P      G  L  Q R  K S + ++L  KQK++ +YG +
Sbjct: 1   GPRFKKIRRLRALPGLTSKRP----GAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG
Sbjct: 56  TERQLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D+I  +   K  A +      +   ++P++++++         +I  
Sbjct: 116 RIVDIPSYRCKPRDIIAARDDQKSRALIQNYLDSSHHEELPKHLTLHAFQYKGLVNQIID 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           S       + +   LVVE+YSR
Sbjct: 176 SK---CVGLKINELLVVEYYSR 194


>gi|49182795|gb|AAT57859.1| small ribosomal protein [Scapania nemorea]
          Length = 195

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVN  +
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILVNNDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNLNLFQKLKIPSHLTFDLTQLQGSVNQTVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ECINLKINELLVVEYYSR 193


>gi|49182684|gb|AAT57804.1| small ribosomal protein [Calypogeia muelleriana]
          Length = 195

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I V++K K  + + +   + ++  +P ++S +   +     +  +  
Sbjct: 117 VDIPSYNCEPGDIITVREKQKSQSIITKNINVFQKLKIPSHLSFDPTELRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIDLKINELLVVEYYSR 193


>gi|67035767|gb|AAY62814.1| small ribosomal protein subunit 4 [Leptotheca boliviana]
          Length = 197

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGVLPGLTNKTPQLKSNS---INQLTANKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N 
Sbjct: 57  TEQQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILIND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I  
Sbjct: 117 RIVDIPSYRCKPQDFITIKDQRKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGVVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   L+VE+YSR
Sbjct: 175 -LNRESIDLKINELLIVEYYSR 195


>gi|67035966|gb|AAY62909.1| small ribosomal protein subunit 4 [Porotrichodendron nitidum]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +  +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEIIISKNIEFYQKSKISNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|548862|sp|P36451|RR4_BROER RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439922|emb|CAA82431.1| ribosomal protein S4 [Bromus erectus]
          Length = 196

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++V+        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTVDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|66876464|gb|AAY58016.1| Rps4 [Cuscuta sandwichiana]
          Length = 197

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 13/207 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KSP   R          R +  S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTNKSPRAIRDL--------RNNSRSEYRIRLEEKQKLRF 52

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++EK+  +  + A +++G T   L+  LE RLD I++R     T  AARQ VNHRH
Sbjct: 53  HYG-LTEKQLINYVQIARKAKGSTGKVLLQLLEMRLDNILFRLGMASTXXAARQLVNHRH 111

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNGR VN  SYRCK  D+I  K  +K    V  + +L   +++  ++++         
Sbjct: 112 VLVNGRLVNRPSYRCKPHDIIMPKNTTKSGVLVQNSLELFTGKELANHLNLFSTPYKGLV 171

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + +   LVVE+YSR
Sbjct: 172 NKIVDTN---WIGLKINELLVVEYYSR 195


>gi|322807729|emb|CBZ05304.1| SSU ribosomal protein S4p (S9e) [Clostridium botulinum H04402 065]
          Length = 197

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVN   VNI SY  K GDVI +++K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNDSKVNIPSYEVKAGDVITLREKYRKNDEFADNFLSLKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197


>gi|116010519|emb|CAL37366.1| ribosomal protein S4 [Ligustrum ovalifolium]
          Length = 194

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----KAGSDPRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPAARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    +  +   +   ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIIMTKDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|67035923|gb|AAY62888.1| small ribosomal protein subunit 4 [Hamatocaulis vernicosus]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|328541094|gb|AEB21771.1| ribosomal protein S4 [Bazzania intermedia]
          Length = 200

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + K+ RR+G       K+     S+           K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLXXKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A + +G T   L+   E RLD  ++R    PTI  ARQ VNH+HV 
Sbjct: 58  G-LTERQLLKYVRIARKXKGSTGQVLLQSXEMRLDNTIFRLGMAPTIPGARQLVNHKHVA 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY CK GD+I  + K K  + + +   L     +P  ++ +   +  +  +
Sbjct: 117 INNNIVDIPSYNCKPGDIITXRDKQKSQSIITKNINLFXNLKIPSXLTFDSIKLCGSINQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
             +        + +   LVVE+YSR
Sbjct: 177 TINR---EWXNLKINELLVVEYYSR 198


>gi|67036098|gb|AAY62975.1| small ribosomal protein subunit 4 [Helodium blandowii]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|328541060|gb|AEB21754.1| ribosomal protein S4 [Kurzia calcarata]
          Length = 197

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+      Y           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTSKTLKLKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHIPINK 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I +++K K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCEPGDIITIREKQKSRSVITKNINLFQNSKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---ELIDLKINELLVVEYYSR 195


>gi|17025862|gb|AAL32096.1| ribosomal protein 4 [Mitthyridium sp. Wall 3859]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I
Sbjct: 117 NNSIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|148381346|ref|YP_001255887.1| ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502]
 gi|153933373|ref|YP_001385723.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397]
 gi|153936972|ref|YP_001389130.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall]
 gi|170755963|ref|YP_001783043.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra]
 gi|171769228|sp|A7FZ00|RS4B_CLOB1 RecName: Full=30S ribosomal protein S4 B
 gi|172047867|sp|A5I7D0|RS4B_CLOBH RecName: Full=30S ribosomal protein S4 B
 gi|148290830|emb|CAL84965.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502]
 gi|152929417|gb|ABS34917.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397]
 gi|152932886|gb|ABS38385.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall]
 gi|169121175|gb|ACA45011.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra]
          Length = 197

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD I YR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIAYRIGFANSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  VNI SY  K GDVI +++K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNGSKVNIPSYEVKTGDVITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197


>gi|328541036|gb|AEB21742.1| ribosomal protein S4 [Isolembidium anomalum]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K       Y           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T    +  LE R D  + R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQSLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I +++K K  + + +   L     +P +++ +   +  +  + 
Sbjct: 117 NNNIVDIPSYNCELGDIITIREKQKSQSVITKNINLFRNLKIPSHLTFDSIKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197


>gi|49182766|gb|AAT57845.1| small ribosomal protein [Neotrichocolea bissetii]
 gi|49182809|gb|AAT57866.1| small ribosomal protein [Temnoma pulchellum]
          Length = 195

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +
Sbjct: 57  RQLLKYVCIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY C+ GD+I ++ K K  + +     L ++  +P +++ +   +  +  ++    
Sbjct: 117 VNIPSYNCEPGDIITIRNKEKSQSIITRNINLFQKLKIPNHLTFDSTQLRGSVNQMIHR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIHLKINELLVVEYYSR 193


>gi|86438870|emb|CAJ55407.1| small ribosomal protein 4 [Plagiochila acanthocaulis]
          Length = 195

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCELGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVV 201
            ++ +        + +   LVV
Sbjct: 177 NQMINR---EWINLKINELLVV 195


>gi|157689450|gb|ABV65281.1| ribosomal protein S4 [Connarus conchocarpus]
          Length = 195

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
              K  RR+G       K P+     G     Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PHFKKIRRLGALPGLTSKRPI----AGNDFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR
Sbjct: 56  ERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVYHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  + + K  A +       A  ++P+++++          +I  S
Sbjct: 116 RVDIPSYRCKPRDIITARDEQKSRALIQNYLDSSAHEELPKHLTLYPLQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WVGLKINELLVVEYYSR 193


>gi|24473812|gb|AAL82749.1| small ribosomal subunit protein 4 [Bryum argenteum]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKAPQLKTNS---INQSIFNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|157689526|gb|ABV65319.1| ribosomal protein S4 [Neurada procumbens]
          Length = 192

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 9/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTSKKP----RAGSDLRSQSRPGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D+I  + + K  A +      +   ++P++++++         +I      
Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNYLDSSTHEELPKHLTLHTLQYKGLVNQIIDRK-- 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 -WVGLKINELLVVEYYSR 190


>gi|12642226|gb|AAK00195.1| rps4 [Entosthodon laevis]
 gi|39546757|gb|AAR28105.1| small ribosomal protein 4 [Entosthodon laevis]
 gi|67035726|gb|AAY62794.1| small ribosomal protein subunit 4 [Entosthodon laevis]
          Length = 193

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S       Q    K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGVLPGLTNKIPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V
Sbjct: 56  QLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +    +++  VP +++ N         +I   L 
Sbjct: 116 DIPSYRCKPDDSITIKNRQKSQAIITKNIDFSQKSKVPNHLTFNSTQKKGLVNQI---LD 172

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 173 RESIGLKINELLVVEYYSR 191


>gi|78369629|gb|ABB43044.1| ribosomal protein 4 [Calymperes palisotii]
          Length = 201

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SY+CK  D I +K + K    +++    + +  +P +++ N         +
Sbjct: 118 VNNRIVNIPSYQCKPQDFITIKDQQKYQTMIVKNINFSPKYKIPSHLTFNSVEKKGLVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 178 I---LDQESIGLKINELLVVEYYSR 199


>gi|62288945|sp|P69651|RR4_SISSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288946|sp|P69652|RR4_SISST RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2293074|emb|CAA92560.1| ribosomal protein S4 [Sisyrinchium sp. 'Lejeune 1997']
 gi|2293081|emb|CAA92561.1| ribosomal protein S4 [Sisyrinchium striatum]
          Length = 194

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +  +       ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDLFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|80974172|gb|ABB53779.1| small ribosomal subunit protein 4 [Ptychomnion cygnisetum]
 gi|92417459|gb|ABE76825.1| ribosomal protein subunit 4 [Ptychomnion cygnisetum]
          Length = 200

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SYRCK  D I +K +      + +     ++  +P +++ +         +
Sbjct: 117 VNDSIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNK 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|49182688|gb|AAT57806.1| small ribosomal protein [Cephaloziella hirta]
 gi|49182728|gb|AAT57826.1| small ribosomal protein [Cephaloziella varians]
          Length = 195

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNSNL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K K K  + + +     ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIISKNLNSFQKSKIPSHLTFDLTQLQGSINQKVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|63191736|gb|AAY34828.1| small ribosomal protein subunit 4 [Leptotheca gaudichaudii]
          Length = 198

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I 
Sbjct: 117 NHIVDIPSYRCKPQDFITIKDRQKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|47606904|gb|AAT36372.1| ribosomal protein subunit 4 [Hymenodon pilifer]
 gi|67035765|gb|AAY62813.1| small ribosomal protein subunit 4 [Hymenodon pilifer]
          Length = 199

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    +    ++      K S + ++L  KQK++ YYG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKTPQLKSNS---INQLTSNKKISQYRIRLEEKQKLRFYYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    V +     ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNRRKSQTIVNKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197


>gi|548871|sp|P36465|RR4_MELAL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439954|emb|CAA82444.1| ribosomal protein S4 [Melica altissima]
          Length = 196

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G  L    K+P +  +     H      K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALLGLTRKTPKSGSNPKKKFH----SGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVYIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|298253340|ref|ZP_06977132.1| ribosomal protein S4 [Gardnerella vaginalis 5-1]
 gi|297532735|gb|EFH71621.1| ribosomal protein S4 [Gardnerella vaginalis 5-1]
          Length = 236

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 39  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 97

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T   +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 98  QLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNLV 157

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+V+ KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 158 DRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 217

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV +    VVE+Y+R
Sbjct: 218 VDQ---IPVEVNIQYVVEYYAR 236


>gi|283455919|ref|YP_003360483.1| 30S ribosomal protein S4 [Bifidobacterium dentium Bd1]
 gi|306822876|ref|ZP_07456252.1| 30S ribosomal protein S4 [Bifidobacterium dentium ATCC 27679]
 gi|309801331|ref|ZP_07695460.1| ribosomal protein S4 [Bifidobacterium dentium JCVIHMP022]
 gi|283102553|gb|ADB09659.1| 30S ribosomal protein S4 [Bifidobacterium dentium Bd1]
 gi|304553508|gb|EFM41419.1| 30S ribosomal protein S4 [Bifidobacterium dentium ATCC 27679]
 gi|308222220|gb|EFO78503.1| ribosomal protein S4 [Bifidobacterium dentium JCVIHMP022]
          Length = 208

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T + +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           + +    PV +    VVEFY+R
Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208


>gi|162415076|gb|ABX89112.1| ribosomal protein S4 [Syntrichia princeps]
          Length = 202

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 4   YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 60

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 61  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 119

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I
Sbjct: 120 NNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 179

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 180 ---LDQESIGLKINELLVVEYYSR 200


>gi|83940939|gb|ABC48866.1| rps4 [Sinojackia huangmeiensis]
 gi|83940941|gb|ABC48867.1| rps4 [Sinojackia rehderiana]
 gi|83940943|gb|ABC48868.1| rps4 [Sinojackia microcarpa]
 gi|83940949|gb|ABC48871.1| rps4 [Sinojackia xylocarpa]
          Length = 194

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P+     G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  + + K  A +  +   +   ++P+++++          +I  S 
Sbjct: 116 VDIPSYRCKPRDIITARDEQKSRALIQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|548876|sp|P36472|RR4_STICA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439966|emb|CAA82450.1| ribosomal protein S4 [Stipa capensis]
          Length = 196

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTVEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|3914865|sp|O20399|RR4_WATAN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2293114|emb|CAA92563.1| ribosomal protein S4 [Watsonia angusta]
          Length = 195

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  LQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WIGLKINELLVVEYYSR 193


>gi|3914849|sp|O20219|RR4_GLAMU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292882|emb|CAA92553.1| ribosomal protein S4 [Gladiolus murielae]
          Length = 195

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 10/201 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WIGLKINELLVVEYYSR 193


>gi|111283694|gb|ABH09197.1| small ribosomal protein 4 [Jackiella curvata]
          Length = 198

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+     SY   +       K S + L+L  KQK++ +YG 
Sbjct: 1   RGPRVKILRRLGALPGLTSKTLKPKSSY---VDRSTSNKKISQYRLRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N
Sbjct: 57  LTEQQLLKYVRVARKAKGSTGQILLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SY  + GD+I VK K +  + + +   L ++  +P +++ +   +     +  
Sbjct: 117 NDIVNIPSYNRESGDIITVKNKLRSQSIITKNLNLFQKLKIPSHLTFDSTKLRGYVNQKI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWVDLKINELLVVEYYSR 196


>gi|24473838|gb|AAL82763.1| small ribosomal subunit protein 4 [Bryum funckii]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035742|gb|AAY62802.1| small ribosomal protein subunit 4 [Dicranoweisia crispula]
          Length = 194

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K   K  A + +    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNGQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|46486544|gb|AAS98708.1| ribosomal protein subunit 4 [Powellia involutifolia]
          Length = 200

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+     S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTNKTFQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYIRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K   K  A   +     ++  +P +++ +         +
Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDGQKSQAITSKNIDFYQKYKIPNHLTYSSLEKKGFVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198


>gi|63191739|gb|AAY34829.1| small ribosomal protein subunit 4 [Mesochaete undulata]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N + V+I SY+CK  D I +K + K  A + +     ++  +P ++  +         +I
Sbjct: 117 NDQIVDIPSYQCKPQDFITIKDRQKSQAIISKNIYFYQKYKIPNHLIYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|83416510|gb|ABC18275.1| small ribosomal subunit protein 4 [Rhytidiadelphus squarrosus]
          Length = 198

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQKKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|63191741|gb|AAY34830.1| small ribosomal protein subunit 4 [Calomnion complanatum]
          Length = 200

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 2   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 118 NDRIVDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198


>gi|49182710|gb|AAT57817.1| small ribosomal protein [Gymnomitrion concinnatum]
          Length = 195

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN   
Sbjct: 57  RQLLKYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYSCELGDIITVKSKQKSQSIITKNVNLFQKLKIPGHLTFDSIELRGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|328541138|gb|AEB21793.1| ribosomal protein S4 [Telaranea tetrapila]
          Length = 198

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K      +Y           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGAPPGLTSKILKPKSNY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHILINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GDVI +K K +  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYDCESGDVITIKDKQRSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|226950856|ref|YP_002805947.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto]
 gi|226841576|gb|ACO84242.1| ribosomal protein S4 [Clostridium botulinum A2 str. Kyoto]
          Length = 197

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVN   VNI SY  K GDVI +++K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNDSKVNIPSYEVKTGDVITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KEPERDE---IPIDANETLVVELYSK 197


>gi|20531128|gb|AAM27384.1| ribosomal protein 4 [Encalypta intermedia]
          Length = 194

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +V+R    PTI  ARQ VNHRHVLVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I ++ + K  A +++    +++  VP ++S +         +I   L 
Sbjct: 117 NIPSYRCKPQDFISIRDRQKSQAIIIKNIDFSQKSKVPNHLSFDSLQKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63101001|gb|AAY33125.1| small ribosomal protein 4 [Conardia compacta]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTHQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYSKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67036040|gb|AAY62946.1| small ribosomal protein subunit 4 [Cirriphyllum cirrosum]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|80974138|gb|ABB53762.1| small ribosomal subunit protein 4 [Euptychium cuspidatum]
          Length = 202

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGTLQGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITEQQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTISGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   VNI SYRCK  D I VK +      + +     ++  +P +++          
Sbjct: 117 ILVNDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NKI---LDRESIGLKINELLVVEYYSR 200


>gi|11878067|gb|AAG40782.1| small ribosomal protein 4 [Haplomitrium mnioides]
          Length = 197

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 7/202 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGT-LPGLTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+++N
Sbjct: 57  LTERQLLRYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184
            ++V+   Y C+  D+I  K   +    + +     +  +P ++ ++    V    +I  
Sbjct: 117 YKTVDAPGYNCEPRDIITTKNPMESRLGMAKGMDFIQSKIPNHLFLDSSKGVGLVNQIID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWISLKINELLVVEYYSR 195


>gi|3098174|gb|AAC15535.1| small ribosomal protein 4 [Leptostomum macrocarpum]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTFNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLXEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++   P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKFQAIISKNIDFYQKYKTPNHLTYNXLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|6002067|emb|CAA58941.1| ribosomal protein S4 [Nardus stricta]
          Length = 196

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSVASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|37992707|gb|AAR06532.1| small ribosomal protein 4 [Trachyxiphium drepanophyllum]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G  L G     +  +S            K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGV-LPGLTNKILELKSSSITQ--STSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++V
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A V +  +  ++  +P +++ N         +I
Sbjct: 117 NDYIVNIPSYRCKPQDFITIKNQQKSEAIVNKNIEFYQKTKIPNHLTYNFLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035919|gb|AAY62886.1| small ribosomal protein subunit 4 [Callialaria curvicaulis]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K K K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNKLKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|328541152|gb|AEB21800.1| ribosomal protein S4 [Lepidozia cupressina]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 9/203 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV-N 124
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ + N
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  
Sbjct: 117 NNIVDIPSYNCEPGDIITIRDKQKSRSIIAKNVNLFQNLKIPSHLTFDSIKLCGSINQTI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWINLKINELLVVEYYSR 196


>gi|222103462|gb|ACM44260.1| small ribosomal protein subunit 4 [Haplocladium microphyllum]
          Length = 203

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 6   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 61

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN
Sbjct: 62  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVN 121

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I 
Sbjct: 122 DCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 180

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 181 --LDRESIGLKINELLVVEYYSR 201


>gi|49182801|gb|AAT57862.1| small ribosomal protein [Kymatocalyx madagascariensis]
          Length = 195

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+      Y   +       K S + ++L  KQK++ +YG ++E+
Sbjct: 2   CKIIRRLGGLPGLTSKTLKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   V
Sbjct: 58  QLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNNLV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY C+ GD+I +K K K  + + +     ++  +P +++ +   +  +  +  +   
Sbjct: 118 DIPSYNCEPGDIITIKNKQKSQSIISKNLNSGQKSKIPSHLTFDLTQLQGSINQKVNR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -EWVNLKINELLVVEYYSR 193


>gi|6002029|emb|CAA58921.1| ribosomal protein S4 [Arundo donax]
          Length = 196

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD IV+R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNIVFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +   ++   +P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            ++          + +   LVVE+
Sbjct: 176 QKVLDRK---WVGLKINELLVVEY 196


>gi|29422377|gb|AAO84584.1| small ribosomal protein 4 [Plagiomnium cuspidatum]
          Length = 197

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D+I +K + K    + +     ++  +P +++ N  N      +I  
Sbjct: 117 RLVDIPSYRCKPQDLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILD 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 RD---SIDLKINELLVVEYYSR 195


>gi|93213402|gb|ABF01127.1| ribosomal protein subunit 4 [Entodon hampeanus]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035791|gb|AAY62826.1| small ribosomal protein subunit 4 [Pterigynandrum filiforme]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 117 NYCMVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDREAIGLKINELLVVEYYSR 197


>gi|291059705|gb|ADD72440.1| ribosomal protein S4 [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 260

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQK 57
           M+ +  ++ KI RR+G N++G PK    +  +   PG  HG ++++K S +G QL+ KQK
Sbjct: 57  MAVKR-ARGKIVRRLGINIFGNPKYTRLLGKKPAPPGKEHGVKQRAKVSVYGEQLKEKQK 115

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
            +  YG +SE++FR++F +A R +G T +N++S +E RLD  V+R  F  +   ARQ V+
Sbjct: 116 FRFAYG-MSERQFRNLFAQAHRMKGVTGNNMLSLMERRLDNTVFRMGFAISRVQARQMVS 174

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           HR+ L+NG++ NI S R    DVI  K +    + +     L++     +++V+ + + A
Sbjct: 175 HRYFLINGKTANIPSMRISAHDVITTKNRKGIHSIIRHNLTLSQGQRGSWLNVDEEQLSA 234

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T   +P +    P         +VE+YSR
Sbjct: 235 TVSELPRAQDIHPVG---NIQHIVEYYSR 260


>gi|67035696|gb|AAY62779.1| small ribosomal protein subunit 4 [Bryomanginia saint-pierrei]
          Length = 195

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 10/203 (4%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183
           N R +NI SYRCK  D I +K + K  A V  +    +  VP +++ N         +I 
Sbjct: 117 NNRIINIPSYRCKPQDFITIKDQQKFQAMVNFS---QKYKVPNHLTFNSLEKKGLVNQI- 172

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   L+VE+YSR
Sbjct: 173 --LDHESIGLKINELLIVEYYSR 193


>gi|67036038|gb|AAY62945.1| small ribosomal protein subunit 4 [Myuroclada maximowiczii]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|18920753|gb|AAL82421.1| ribosomal protein system 4 [Myurella acuminata]
          Length = 198

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQKKSEAIISKNIESYQKYKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|216263496|ref|ZP_03435491.1| ribosomal protein S4 [Borrelia afzelii ACA-1]
 gi|215980340|gb|EEC21161.1| ribosomal protein S4 [Borrelia afzelii ACA-1]
          Length = 208

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ SK K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKQISKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T  NL+S LE R+D IVYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNIVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             V++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++ 
Sbjct: 120 GIVILNGRRVTIPSIILRANDQIKIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|49182675|gb|AAT57800.1| small ribosomal protein [Balantiopsis diplophylla]
          Length = 195

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD I V+ + K  + + +   L +   +P +++ +   +     +  +  
Sbjct: 117 VDIPSYNCEPGDNITVRNRQKSQSIITKNINLFQNSKIPSHLTFDSTKLRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ELINLKINELLVVEYYSR 193


>gi|63191665|gb|AAY34794.1| small ribosomal protein subunit 4 [Rozea pterogonioides]
          Length = 202

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRXDNVIFRLGMAPTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I VK + K    + +  +  ++  +P +++ +         +
Sbjct: 119 VNDYMVDIPSYRCKPQDFITVKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQ 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200


>gi|3098184|gb|AAC15540.1| small ribosomal protein 4 [Pohlia cruda]
          Length = 198

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K    + +      +  +P +++ N  N      +I 
Sbjct: 117 DRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYRKYKIPNHLTYNSLNKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196


>gi|225351919|ref|ZP_03742942.1| hypothetical protein BIFPSEUDO_03523 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157166|gb|EEG70505.1| hypothetical protein BIFPSEUDO_03523 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 208

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T + ++  LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGQTGNAMLIDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGTHRDVLPPVPGYLDVNLPSLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           + +    PV +    VVEFY+R
Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208


>gi|37548857|gb|AAO32697.1| ribosomal protein 4 [Pogonatum dentatum]
          Length = 196

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKYYGDISE 67
            KI RR+G       K+P       PG   Q     K S + ++L  KQK++ +YG I+E
Sbjct: 3   CKIIRRLGALPGLTNKTPQLK----PGYMNQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   
Sbjct: 58  RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +    + +    +++  +P +++ N         +I   L
Sbjct: 118 VNIPSYRCKPQDFITIKDRQESQVIIDKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 175 DRESIGLKINELLVVEYYSR 194


>gi|47606886|gb|AAT36363.1| ribosomal protein subunit 4 [Calomnion brownseyi]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63191726|gb|AAY34823.1| small ribosomal protein subunit 4 [Fleischerobryum longicolle]
          Length = 197

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I  
Sbjct: 117 RIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|222103496|gb|ACM44277.1| small ribosomal protein subunit 4 [Brachythecium rutabulum]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035584|gb|AAY62723.1| small ribosomal protein subunit 4 [Kiaeria glacialis]
          Length = 194

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNGRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|121761859|gb|ABM65015.1| ribosomal protein S4 [Plagiomnium rhynchophorum]
          Length = 199

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGPTNKTPQLKSSS---INHSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R ++I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I
Sbjct: 117 NDRLIDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 LDRD---FIDLKINELLVVEYYSR 197


>gi|222103548|gb|ACM44303.1| small ribosomal protein subunit 4 [Ptilium crista-castrensis]
          Length = 202

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSPLRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   V+I SYRCK  D I +K + K    +    +  ++ ++P +++ +        
Sbjct: 117 ILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINRNIEFYQKSEIPNHLTYSSLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   LVVE+YSR
Sbjct: 177 NQI---LDRESIGLKINELLVVEYYSR 200


>gi|37992575|gb|AAR06466.1| small ribosomal protein 4 [Lepidopilidium portoricense]
          Length = 199

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSVSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++V
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P Y++ N         +I
Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKIKIPNYLTYNFVEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|32423695|gb|AAP81238.1| ribosomal protein S4 [Candidatus Portiera aleyrodidarum]
          Length = 203

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 19/213 (8%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K  ++     PG + ++ +++ + +G QLR
Sbjct: 1   MARYLGPKCKLSRREGTDLFLKSGMVSIEEKCKIDK---IPGQN-KKHRTRITEYGKQLR 56

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+++ YG + EK+F++ +K+A +++G     L+  LESRLD IVYR  F  T   AR
Sbjct: 57  EKQKVRRIYGVL-EKQFKNYYKKAAKNKGAKGEYLLQSLESRLDNIVYRMGFSVTRAEAR 115

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173
           Q VNH+ + VNGR VNI SY+   GD I ++ KS     +  A  +A +   +++ V+  
Sbjct: 116 QLVNHKTIKVNGRIVNISSYKVTVGDCISIRAKSMNQTRIKNALAIANK--VKWVHVDEK 173

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            M      +PS          +   L+VE YS+
Sbjct: 174 KMEGIVKYLPSK-----ISTDINEKLIVELYSK 201


>gi|168181943|ref|ZP_02616607.1| 30S ribosomal protein S4 [Clostridium botulinum Bf]
 gi|182674732|gb|EDT86693.1| 30S ribosomal protein S4 [Clostridium botulinum Bf]
          Length = 197

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVN   VNI SY  K GDVI +++K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNDSKVNIPSYEVKIGDVITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KQPERDE---IPIDANETLVVELYSK 197


>gi|66866225|gb|AAY57783.1| small ribosomal protein 4 [Meesia triquetra]
          Length = 206

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 13/210 (6%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 2   RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMV 176
           VN R V+I SYRCK  D I +K + K  A +      +  +  ++  +P +++ N     
Sbjct: 118 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNIEFYQKYKIPNHLTYNSLKKQ 177

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I   L      + +   LVVE+YSR
Sbjct: 178 GLVNQI---LNRESIDLKINELLVVEYYSR 204


>gi|168178912|ref|ZP_02613576.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916]
 gi|182670114|gb|EDT82090.1| ribosomal protein S4 [Clostridium botulinum NCTC 2916]
          Length = 197

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQIVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVN   VNI SY  K GDVI +K+K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNDSKVNIPSYEVKIGDVITLKEKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KQPERDE---IPIDANETLVVELYSK 197


>gi|83940945|gb|ABC48869.1| rps4 [Changiostyrax dolichocarpa]
          Length = 194

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P+     G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  + + K  A V  +   +   ++P+++++          +I  S 
Sbjct: 116 VDIPSYRCKPRDIITARDEQKSRALVQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|290487078|gb|ADD29923.1| ribosomal protein S4 [Phoradendron serotinum]
          Length = 202

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 16/211 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN----TRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           MS+    + K  RR+G       K P +       +  G        K S++ ++L  KQ
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKRPRSGSDIRNPFPSGK-------KRSHYRIRLEEKQ 53

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K++ +Y  ++E++     + A +++G +   L+  LE RLD I++R     TI  ARQ +
Sbjct: 54  KLRFHYC-LTERQLLKYVRIAGKAKGASGRVLLQLLEMRLDNILFRLGMTSTISGARQLI 112

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNM 175
           NHRH+LVN R V+I SYRCK  ++I  + + K    +       + +++P++++++    
Sbjct: 113 NHRHILVNERIVDIPSYRCKPQEIITARNEKKSQVLIQNHVDSSSHKELPKHLTLHPFQY 172

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +I  S       + +   LVVE+YSR
Sbjct: 173 KGFVNQIIDSQ---WVGLKINELLVVEYYSR 200


>gi|148272986|ref|YP_001222547.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|172047226|sp|A5CRZ7|RS4_CLAM3 RecName: Full=30S ribosomal protein S4
 gi|147830916|emb|CAN01860.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 209

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 112/205 (54%), Gaps = 8/205 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
           R  SK ++ R +G  L  +    +  R Y PG HG+ ++ + S + ++LR KQ+++  YG
Sbjct: 6   RTRSKTRLSRALGIPLTPKAAKYLEKRPYAPGEHGRSKRKQDSDYAVRLREKQRLRAQYG 65

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I E + +  F+EA R++G T  NL+  LE RLD +V R+    T   ARQ V HRH++V
Sbjct: 66  -IREAQLKIAFQEARRTQGLTGENLVEILEQRLDALVVRSGLARTTAQARQLVVHRHIMV 124

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATF 179
           +G+ V+  S+R K G +I VK +S+       A+     DV    P Y+ V  D + A  
Sbjct: 125 DGKIVDRPSFRVKAGQMIHVKPRSEGTEPFQVAAAGGHADVLPKLPSYLEVELDKLQARL 184

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +    PV  +  LVVE+Y
Sbjct: 185 VRLPKRAE---VPVTCEVQLVVEYY 206


>gi|77862517|gb|ABB04531.1| small ribosomal protein 4 [Conocephalum conicum]
          Length = 201

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ ++G 
Sbjct: 4   RGPRVKIIRRLGALPGLTNKTLKSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHFG- 59

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N
Sbjct: 60  LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILIN 119

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
             +V+I SY CK  DVI +K + K  + + +  +  ++  +P ++S +   +     +I 
Sbjct: 120 NITVDIPSYNCKPKDVITIKDRQKSQSIITKNLKSFQKSKIPNHLSFDLIQIKGLVNQII 179

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 180 DR---EWIYLKINELLVVEYYSR 199


>gi|66866210|gb|AAY57778.1| small ribosomal protein 4 [Breutelia pendula]
          Length = 207

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMV 176
           VN R V+I SYRCK  D I +K + K  A +         D      +P +++ N     
Sbjct: 119 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYNSLENK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I   L      + +   LVVE+YSR
Sbjct: 179 GLVNQI---LDRESIGLKINELLVVEYYSR 205


>gi|222103526|gb|ACM44292.1| small ribosomal protein subunit 4 [Brachythecium plumosum]
          Length = 204

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 6   YRGPRVRIIRRLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 62

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 63  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 121

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 122 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 181

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 182 ---LDRESIGLKINELLVVEYYSR 202


>gi|49182718|gb|AAT57821.1| small ribosomal protein [Harpanthus scutatus]
          Length = 195

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGALPGLTSKTLKPKSSY---VDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ N   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFNSIELRGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|42556458|gb|AAS19824.1| small ribosomal protein 4 [Mastigophora woodsii]
 gi|118626065|emb|CAL39337.1| small ribosomal protein 4 [Mastigophora woodsii]
          Length = 191

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTEQQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +I +      
Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGSINQIINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IHLKINELLVVEYYSR 189


>gi|3098262|gb|AAC15579.1| small ribosomal protein 4 [Thamnobryum alopecurum]
          Length = 198

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNH H+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHGHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|62288924|sp|P69630|RR4_ALOPR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288932|sp|P69638|RR4_CINLA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288934|sp|P69640|RR4_DESFL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288939|sp|P69645|RR4_LAMAU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439920|emb|CAA82425.1| ribosomal protein S4 [Alopecurus pratensis]
 gi|439930|emb|CAA82433.1| ribosomal protein S4 [Cinna latifolia]
 gi|439932|emb|CAA82435.1| ribosomal protein S4 [Avenella flexuosa]
 gi|439948|emb|CAA82441.1| ribosomal protein S4 [Lamarckia aurea]
 gi|6002079|emb|CAA58949.1| ribosomal protein S4 [Sesleria caerulea]
          Length = 196

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNFIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|548859|sp|P36447|RR4_ANTOD RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439918|emb|CAA82427.1| ribosomal protein S4 [Anthoxanthum odoratum]
          Length = 196

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKDLVRNSIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|304439715|ref|ZP_07399614.1| 30S ribosomal protein S4 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371790|gb|EFM25397.1| 30S ribosomal protein S4 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 203

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 10/205 (4%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           +K    + K  RR+G N+ G PK+              R   K + +G QL  KQ+++ Y
Sbjct: 7   AKMMGPRFKESRRLGLNVCGHPKANKRMTKGT-----ARSDKKLTEYGKQLLEKQRLRAY 61

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + EK+F ++FKEA ++   T   L+ FLE RLD + YR  F  +I  ARQ V+H HV
Sbjct: 62  YGVL-EKQFVNLFKEAKKAPEQTGTALVQFLEMRLDNLAYRMGFANSIRQARQLVSHGHV 120

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181
            VNG+ +NI SYRCK GDVI +  +  + A   E  +        YIS +  N  AT   
Sbjct: 121 HVNGKKLNIPSYRCKPGDVISLSPRGMKSAIFKENFETNFVTSYPYISKD-KNFKATLTS 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P        P+ ++  L+VEFYS+
Sbjct: 180 VPGR---EDIPIEIEDQLIVEFYSK 201


>gi|18920731|gb|AAL82410.1| ribosomal protein system 4 [Bardunovia baicalensis]
          Length = 197

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  +++ +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKNKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|282855416|ref|ZP_06264737.1| ribosomal protein S4 [Pyramidobacter piscolens W5455]
 gi|282586712|gb|EFB91959.1| ribosomal protein S4 [Pyramidobacter piscolens W5455]
          Length = 206

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 10/207 (4%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           ++ + K KI RR+G N++G PK    +  ++  PG    RR++K S +GLQL+ KQK++ 
Sbjct: 7   RKVTPKGKIVRRLGANVFGNPKYDKLLAKKATPPGG-APRRRAKQSIYGLQLQEKQKIRL 65

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+ R+++  A +  G T  N++  LESR D +VYR  +  T   ARQ V H H
Sbjct: 66  AYG-VSEKQLRAVYVAAKKMDGVTGSNMLILLESRFDNVVYRLGYCVTRPQARQLVRHGH 124

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
            LVNGR V++   R   GDV+ V++ S ++  + +  + A     P ++++       T 
Sbjct: 125 FLVNGRKVDMPGVRLNPGDVVTVRENSAEMVVLKQNLEAAAAVSKPAWLTLEGGK--GTI 182

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P        P I    +VVEFYS+
Sbjct: 183 VRLPERAD---IPNIADEQVVVEFYSK 206


>gi|24473814|gb|AAL82750.1| small ribosomal subunit protein 4 [Imbribryum blandum]
          Length = 196

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLK------INQSISNKKISQYRIRLEEKQKLRFHYG 54

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ V+HRH+LV
Sbjct: 55  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILV 113

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 114 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 173

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 174 ---LDRESIGLKINELLVVEYYSR 194


>gi|3098228|gb|AAC15562.1| small ribosomal protein 4 [Fontinalis antipyretica]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +L ++  +P +++           +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSEALISKNIELYKKYKIPNHLTYISLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035568|gb|AAY62715.1| small ribosomal protein subunit 4 [Cnestrum alpestre]
          Length = 198

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKQGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQELIGLKINELLVVEYYSR 196


>gi|17025822|gb|AAL32078.1| ribosomal protein 4 [Syrrhopodon apertus]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K      S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKISQLKSSS---INQSTPNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKIKGSTGKVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++  + + +  +P +++ N         +I
Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKIPNHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|63101089|gb|AAY33169.1| small ribosomal protein 4 [Orthorrhynchium elegans]
          Length = 198

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S+   +H      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRMRIIRRLGTLPGLTNKTPQLKSSF---IHQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI+ ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIYGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K +    A + +     ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQQNSEALINKNIDFYKKYKIPNHLTYSFLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|154498912|ref|ZP_02037290.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC
           29799]
 gi|150271752|gb|EDM98978.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC
           29799]
          Length = 200

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K      K  R +G +      +   +     G      + K S + LQL  KQK+K 
Sbjct: 1   MAKNMQPIAKRCRALGISPAAMGYAKKESNRNPGGQ----MRKKKSEYALQLSEKQKVKF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FRS +++A R  G T  NL+  +E RLD  VYR  F  T   ARQ VNH H
Sbjct: 57  VYG-IMEKQFRSYYEKAARMPGKTGDNLLVLVERRLDNAVYRLGFANTRREARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMVAT 178
             VNG+ V+I SY  K GDVIEVK+ S+  A   +          +P+++    + +  T
Sbjct: 116 FTVNGQRVDIPSYLVKAGDVIEVKEGSRSSAKFKKLTGEDAPNVLLPQWLEREKNTLKGT 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++P   +DV  PV  + +L+VE YS+
Sbjct: 176 VTKLPVR-EDVDLPV--EEHLIVELYSK 200


>gi|229915463|gb|ACQ90808.1| ribosomal protein S4 [Oocystis solitaria]
          Length = 202

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+ + S+ +I RR+G+       +   TR   PG HG     KPS +G++L+ KQK++ 
Sbjct: 1   MSRYKGSRLRIIRRLGKLPGFT--TKTTTRKERPGQHG-TSFKKPSQYGIRLQEKQKIRY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E++     ++A + +G T  NL+  LE RLD I++R  F PTI AARQ + H H
Sbjct: 58  NYG-ITERQLIRYVRQARKIKGSTGENLLQLLEMRLDNILFRFGFAPTIVAARQLITHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
            LVN + V I SY+C   ++I + +K K +  +     Q  E  VP ++ ++  N++ T 
Sbjct: 117 FLVNNKKVTIPSYQCVSKEIISIAKKQKSVNLIKNFLLQSNETLVPPHLILDKQNLIGTI 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +        + +   L+VEFYSR
Sbjct: 177 NSTVNRQ---FIGLQLNELLIVEFYSR 200


>gi|12642224|gb|AAK00194.1| rps4 [Entosthodon bonplandii]
          Length = 194

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S       Q    K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGVLPGLTNKTPQLRSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   
Sbjct: 56  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I VK + K  A + + +  +++  VP +++ +         +I   L
Sbjct: 116 VDIPSYRCKPEDFITVKNRKKSQAIITKNTYFSQKSKVPNHLTFDFTQKKGLVTQI---L 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 DRESIGLKINELLVVEYYSR 192


>gi|67036014|gb|AAY62933.1| small ribosomal protein subunit 4 [Neodolichomitra yunnanensis]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +   +  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFHPKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63191677|gb|AAY34800.1| small ribosomal protein subunit 4 [Homaliodendron piniforme]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPHVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + + ++  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNTEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|29422399|gb|AAO84595.1| small ribosomal protein 4 [Leiomela aristifolia]
          Length = 198

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I 
Sbjct: 117 XRIVDIPSYRCKPXDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSXENKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|67035921|gb|AAY62887.1| small ribosomal protein subunit 4 [Cratoneuron filicinum]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K K K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNKLKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|255659528|ref|ZP_05404937.1| ribosomal protein S4 [Mitsuokella multacida DSM 20544]
 gi|260848081|gb|EEX68088.1| ribosomal protein S4 [Mitsuokella multacida DSM 20544]
          Length = 197

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 97/207 (46%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G       +S  + R        +R   K S +G QL+ KQK K 
Sbjct: 1   MAIDRVPALKRCRALGLEPAVIGRSKESKRQL------RRTNRKVSEYGTQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + +A + +G T  NL+  LE RLD +VYR     T   ARQ V H H
Sbjct: 55  IYGVL-EKQFRGYYDKAKKMQGVTGENLLGLLERRLDNVVYRLGLANTRRQARQLVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I S     GDVI V +KS+  A   E  + +     P ++  +  N+  T 
Sbjct: 114 FTVNGKRVDIPSALVNAGDVIAVAEKSQSNAFFKELKESSNALSAPAWLQADQANLTGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P+  +     V +    +VE YS+
Sbjct: 174 TRFPNRDE---IDVPVNEQAIVELYSK 197


>gi|67036044|gb|AAY62948.1| small ribosomal protein subunit 4 [Trachybryum megaptilum]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035941|gb|AAY62897.1| small ribosomal protein subunit 4 [Leptodon longisetus]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A R++G T   L+   E R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARRAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|261367775|ref|ZP_05980658.1| ribosomal protein S4 [Subdoligranulum variabile DSM 15176]
 gi|282570573|gb|EFB76108.1| ribosomal protein S4 [Subdoligranulum variabile DSM 15176]
          Length = 200

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K      K  R +G +    G  K   N         G + + K S +  QL  KQK+
Sbjct: 1   MAKNTQPIAKRCRALGISPAVMGYGKKTTNRNP------GGQMRKKKSEYATQLNEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I EK+F + ++ A R  G T  NL+  +E RLD +VYR  F  T   ARQ V+H
Sbjct: 55  KFVYG-ILEKQFHTYYETATRMPGQTGVNLLVLVERRLDNVVYRLGFAKTRRDARQLVSH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS--QLAERDVPEYISVNHDNMV 176
            H  VNG+ VNI SY  K GDVIEV + S+      +          +P ++  + + + 
Sbjct: 114 NHFTVNGKRVNIPSYLVKPGDVIEVIESSRSSVKFSKLLGEDAPVVLLPSWLERDKNALK 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T V++P   +D+  P+    +L+VE YS+
Sbjct: 174 GTVVKMPVR-EDIDVPIA--EHLIVELYSK 200


>gi|63145915|gb|AAY33895.1| small ribosomal protein 4 [Pallavicinia rubristipa]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G  L G     + +RS            K S + ++L  KQK++ +YG +
Sbjct: 3   GPRAKIIRRLGA-LPGLSHKMLGSRSSYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-L 58

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+L+N 
Sbjct: 59  TERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILINK 118

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPS 184
            +VNI SY CK  DVI ++ + +  + + +   L  E+ +P +++ +      +  +I  
Sbjct: 119 NTVNIPSYNCKPRDVITIRNRHESQSVITKNINLFQEQRIPNHLTFDSTRFCGSVNQIID 178

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 179 R---EWIGLKINELLVVEYYSR 197


>gi|33413261|emb|CAD86765.1| ribosomal protein small subunit 4 [Orthomniopsis dilatata]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 117 NDRLVDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 LDRN---SIDLKINELLVVEYYSR 197


>gi|237796865|ref|YP_002864417.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657]
 gi|229261841|gb|ACQ52874.1| 30S ribosomal protein S4 [Clostridium botulinum Ba4 str. 657]
          Length = 197

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVN   VNI SY  K GDVI +++K ++           ++    YI  ++D      +
Sbjct: 115 ILVNDSKVNIPSYEVKIGDVITLREKYRKNDEFANNFLALKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P   +    P+     LVVE YS+
Sbjct: 175 KQPERDE---IPIDANETLVVELYSK 197


>gi|222103562|gb|ACM44310.1| small ribosomal protein subunit 4 [Thuidium tamariscinum]
          Length = 203

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K           ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKISQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|170781158|ref|YP_001709490.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189045370|sp|B0REK0|RS4_CLAMS RecName: Full=30S ribosomal protein S4
 gi|169155726|emb|CAQ00847.1| 30S ribosomal protein S4 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 209

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 112/205 (54%), Gaps = 8/205 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
           R  SK ++ R +G  L  +    +  R Y PG HG+ ++ + S + ++LR KQ+++  YG
Sbjct: 6   RTRSKTRLSRALGIPLTPKAAKYLEKRPYAPGEHGRSKRKQDSDYAVRLREKQRLRAQYG 65

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I E + +  F+EA R++G T  NL+  LE RLD +V R+    T   ARQ V HRH++V
Sbjct: 66  -IREAQLKIAFQEARRTQGLTGENLVEILEQRLDALVVRSGLARTTAQARQLVVHRHIMV 124

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATF 179
           +G+ V+  S+R K G +I VK +S+       A+     DV    P Y+ V  D + A  
Sbjct: 125 DGKIVDRPSFRVKAGQMIHVKPRSEGTEPFQVAAAGGHADVLPKLPPYLEVELDKLQARL 184

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR+P   +    PV  +  LVVE+Y
Sbjct: 185 VRLPKRAE---VPVTCEVQLVVEYY 206


>gi|157689568|gb|ABV65340.1| ribosomal protein S4 [Swietenia macrophylla]
          Length = 193

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  +   K  A +      +   ++P++++++         +I  S  
Sbjct: 116 DIPSYRCKPRDIITARDDQKSRALIPNYLDSSHPEELPKHLTLHAFQYKGLVNQIIDSK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVGLKINELLVVEYYSR 191


>gi|18920757|gb|AAL82423.1| ribosomal protein system 4 [Myurella tenerrima]
          Length = 197

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKDQKKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|67035869|gb|AAY62861.1| small ribosomal protein subunit 4 [Mastopoma subfiliferum]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPEARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|119953396|ref|YP_945605.1| 30S ribosomal protein S4 [Borrelia turicatae 91E135]
 gi|254764571|sp|A1R043|RS4_BORT9 RecName: Full=30S ribosomal protein S4
 gi|119862167|gb|AAX17935.1| SSU ribosomal protein S4P [Borrelia turicatae 91E135]
          Length = 208

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+++  +K K+ RR G N++ +PK    +  +   PG+HG+ R++K + +G QL  KQK+
Sbjct: 1   MNRKNIAKGKLVRRFGVNIFEQPKYDKLLKKKPNAPGMHGRSRRAKITEYGKQLIEKQKV 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  +IFKE+ R  G T  NL++ LE R+D +VYRA F  +   ARQ V+H
Sbjct: 61  KFTYG-VSERQLTNIFKESRRQHGVTGDNLLALLERRIDNVVYRAGFAISRAHARQIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMV 176
             +++NGR V I S   +  D+I+VK+K +    V    +     R +P +I VN D++ 
Sbjct: 120 GIIMLNGRRVTIPSITLRANDMIQVKEKDRLKKLVRSNIEKTSTLRKLPTWIEVNADDLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               R PS  +    P +    ++VE+YS+
Sbjct: 180 VKITRPPSRDE---IPTLANEQMIVEYYSK 206


>gi|157689554|gb|ABV65333.1| ribosomal protein S4 [Schinus terebinthifolius]
          Length = 194

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTRKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  +      A +      +   ++P++++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITARDDQNSRALIQNYLDSSHHEELPKHLTLHAVQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|3098154|gb|AAC15525.1| small ribosomal protein 4 [Scouleria aquatica]
          Length = 199

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---TNQSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYIRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A + +    +++  VP +++ N         +I
Sbjct: 117 NDCIVNIPSYRCKPLDFITIKNRQKSQAIISKNINFSQKYKVPTHLTFNSLQKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LNRESIDLKINELLVVEYYSR 197


>gi|63100979|gb|AAY33114.1| small ribosomal protein 4 [Herzogiella adscendens]
          Length = 199

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VBI SYRCK  D I +K + K    + +  +  ++   P +++ +         +I
Sbjct: 117 NDCIVBIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKXPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|294155799|ref|YP_003560183.1| 30S ribosomal protein S4 [Mycoplasma crocodyli MP145]
 gi|291599886|gb|ADE19382.1| 30S ribosomal protein S4 [Mycoplasma crocodyli MP145]
          Length = 199

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++      K  RR+G ++    K  +    R+Y PG HG +R  K S +GL L  KQK+
Sbjct: 1   MARYTGPVFKKSRRLGFSILETGKEFAKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKI 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  +G ISEK+ +  + +A + +G T  NL+  LESRLD +VYRA F  T   ARQ VNH
Sbjct: 60  KYVFG-ISEKQLQKSYIKATKIKGITGTNLLQVLESRLDNLVYRAGFAQTRRQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H LV+G+  +I S   K G  I +K+KS++   + +A  LA +    +++    +    
Sbjct: 119 NHFLVDGKKADIPSMSIKIGSTITLKEKSQKNIQITDA--LANKAASPWLT--RKDFNFK 174

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F R+P   +       ++  L+VE+Y++
Sbjct: 175 FDRLPERNE---MHSEIKDALIVEYYAK 199


>gi|253581361|ref|ZP_04858587.1| ribosomal protein S4 [Fusobacterium varium ATCC 27725]
 gi|251836725|gb|EES65259.1| ribosomal protein S4 [Fusobacterium varium ATCC 27725]
          Length = 195

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R   P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANKKPTEYAIQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQVVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+ V + SK L  +  A +  E  VP ++ ++        +
Sbjct: 115 VAVNGRRVNIASYRVKVGDVVSVIENSKNLDIIKTAVE--ESRVPAWLELDKAAFSGKVI 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|237736197|ref|ZP_04566678.1| SSU ribosomal protein S4P [Fusobacterium mortiferum ATCC 9817]
 gi|229421750|gb|EEO36797.1| SSU ribosomal protein S4P [Fusobacterium mortiferum ATCC 9817]
          Length = 195

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R   P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANKKPTEYAVQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDVI + + SK L  +  + + A   VP ++ ++        +
Sbjct: 115 VAVNGRRVNIASYRVKVGDVISIIENSKNLDIIKTSVEDA--TVPAWLELDRAAFSGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|67035939|gb|AAY62896.1| small ribosomal protein subunit 4 [Heterocladium dimorphum]
          Length = 199

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|49182708|gb|AAT57816.1| small ribosomal protein [Goebeliella cornigera]
          Length = 197

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 7/200 (3%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    SY           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTNKTPKPKSSYI--DRSTSSNKKISQYRIRLEEKQKLRFHYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ VN  +
Sbjct: 58  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMTPTIPGARQLVNHRHISVNNAT 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + +        +R++P +++ +   +     +  +  
Sbjct: 118 VDIPSYNCEPGDIIAIRNKEKSQSIITRNINAFQKREIPNHLTFDLTQLQGLVNQTINR- 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 --EFIDLKVNELLVVEYYSR 194


>gi|548872|sp|P36466|RR4_MELUN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439956|emb|CAA82445.1| ribosomal protein S4 [Melica uniflora]
          Length = 196

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P +  +     H      K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTPKSGSNPKKKFH----SGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVYIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNSIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|3914844|sp|O20106|RR4_CYPSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292831|emb|CAA92552.1| ribosomal protein S4 [Cypella sp. 'Lejeune 1997']
          Length = 194

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHMAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +    +       +  ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSSHEELPNHLTIDPLQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|66866207|gb|AAY57777.1| small ribosomal protein 4 [Aulacomnium palustre]
          Length = 206

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 13/210 (6%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    +       K S + ++L   QK++ +Y
Sbjct: 2   RYRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEENQKLRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 59  G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMV 176
           VN   V+I SYRCK  D I +K + K  A +      +   L ++  +P +++ +     
Sbjct: 118 VNDHIVDIPSYRCKPQDFITIKDRQKSEAIIXXXXXXKNIDLYQKYKIPNHLTYSSLEKK 177

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I   L      + +   LVVE+YSR
Sbjct: 178 GLVNQI---LDRESIGLKINELLVVEYYSR 204


>gi|108796850|ref|YP_636392.1| ribosomal protein S4 [Staurastrum punctulatum]
 gi|90101670|sp|Q32RY4|RR4_STAPU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|61393618|gb|AAX45759.1| ribosomal protein S4 [Staurastrum punctulatum]
          Length = 212

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 20/218 (9%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+   L G   SP+   +    ++ + ++   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLNTPLPGLTSSPIVNST----VNTKSQRKDKSEYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++     + A R++G T   L+  LE RLD I++R    PTI AARQ VNH H
Sbjct: 57  HYG-ITERQLLRYVRLARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE------------RDVPEYI 168
           VLVN R V+I S+RCK  + I ++ +++  A V +    ++              VP ++
Sbjct: 116 VLVNERVVDIPSFRCKPQENISIRDRARSRALVDKNLNNSQESKKLSPSRDFLSKVPTHL 175

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +N  N  A+  ++ +        V +   LVVE+YSR
Sbjct: 176 RINTKNYKASVNQVVNRN---SIGVKVNELLVVEYYSR 210


>gi|222103530|gb|ACM44294.1| small ribosomal protein subunit 4 [Plagiothecium platyphyllum]
          Length = 198

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|62288931|sp|P69637|RR4_CALEP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288942|sp|P69648|RR4_PHLPR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439928|emb|CAA82432.1| ribosomal protein S4 [Calamagrostis epigeios]
 gi|439960|emb|CAA82447.1| ribosomal protein S4 [Phleum pratense]
          Length = 196

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|222103426|gb|ACM44242.1| small ribosomal protein subunit 4 [Drepanocladus aduncus]
          Length = 203

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 6   RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 61

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 62  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 121

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 122 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 180

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 181 --LDRESIGLKINELLVVEYYSR 201


>gi|67035763|gb|AAY62812.1| small ribosomal protein subunit 4 [Codonoblepharon menziesii]
          Length = 202

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 4   YRGPRVKIVRRLGILPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 60

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 61  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 119

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +      +  +P +++ N         +I
Sbjct: 120 NHRIVDIASYRCKPQDFITIKNRQKSQDIIAKNIDFYPKYKIPNHLTYNSLEKKGLVNQI 179

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 180 ---LDRELIGLKINELLVVEYYSR 200


>gi|49182677|gb|AAT57801.1| small ribosomal protein [Bazzania sp. Davis 146]
          Length = 195

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|3098212|gb|AAC15554.1| small ribosomal protein 4 [Aulacomnium turgidum]
          Length = 199

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGLRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +   L ++  +P +++ +         +I
Sbjct: 117 NDHIVDIPSYRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|37548859|gb|AAO32698.1| ribosomal protein 4 [Pogonatum japonicum]
          Length = 195

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   CKIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 58  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L 
Sbjct: 118 NIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIGLKINELLVVEYYSR 193


>gi|62288928|sp|P69634|RR4_ARUJA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288943|sp|P69649|RR4_PHYFL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439916|emb|CAA82428.1| ribosomal protein S4 [Pseudosasa japonica]
 gi|439958|emb|CAA82448.1| ribosomal protein S4 [Phyllostachys flexuosa]
          Length = 196

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    +  +   ++   +P++++++        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLIQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196


>gi|24473822|gb|AAL82754.1| small ribosomal subunit protein 4 [Brachymenium niveum]
          Length = 198

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNINLYQKYKTPNHLTYNFLKKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|67035775|gb|AAY62818.1| small ribosomal protein subunit 4 [Hylocomiastrum pyrenaicum]
          Length = 199

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K K K    + +     ++  +P++++ +         +I
Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNKRKSETIISKNIDFYQKYKIPDHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|118626109|emb|CAL41757.1| small ribosomal protein 4 [Anastrophyllum alpinum]
          Length = 191

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRTKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VELKINELLVVEYYSR 189


>gi|328541154|gb|AEB21801.1| ribosomal protein S4 [Lepidozia microphylla]
          Length = 198

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+  D+I ++ + K  + + +   L +   +P +++ +   +  +  +  +
Sbjct: 117 NIVDIPSYNCEPRDIITIRDRQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|63100971|gb|AAY33110.1| small ribosomal protein 4 [Bryonorrisia acutifolia]
          Length = 198

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196


>gi|257470859|ref|ZP_05634949.1| 30S ribosomal protein S4 [Fusobacterium ulcerans ATCC 49185]
 gi|317065062|ref|ZP_07929547.1| SSU ribosomal protein S4P [Fusobacterium ulcerans ATCC 49185]
 gi|313690738|gb|EFS27573.1| SSU ribosomal protein S4P [Fusobacterium ulcerans ATCC 49185]
          Length = 195

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R   P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVVLGVNKSSKRGPRP-----NANKKPTEYAIQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQVVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDV+ V + SK L  +  A +  +  VP ++ ++        +
Sbjct: 115 VAVNGRRVNIASYRVKVGDVVSVIENSKNLDIIKTAVE--DSRVPAWLELDKAAFSGKVI 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|46811010|gb|AAT01823.1| small ribosomal protein 4 [Haplomitrium mnioides]
          Length = 196

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 7/201 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGT-LPGLTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+++N 
Sbjct: 57  TERQLLRYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMINY 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
           ++V+   Y C+  D+I  K   +    + +     +  +P ++ ++    V    +I   
Sbjct: 117 KTVDAPGYNCEPRDIITTKNPMESRLGMAKGMDFIQSKIPNHLFLDSSKGVGLVNQIIDR 176

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 177 ---EWISLKINELLVVEYYSR 194


>gi|63100977|gb|AAY33113.1| small ribosomal protein 4 [Bryostreimannia turgida]
          Length = 198

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I 
Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|195984190|gb|ACG63785.1| rps4 [Oedipodiella australis var. catalaunica]
          Length = 196

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE R D +++R     TI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMALTIPEARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +    +++  VP +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKDRQKSQAIITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|71894490|ref|YP_278598.1| 30S ribosomal protein S4 [Mycoplasma synoviae 53]
 gi|90101696|sp|Q4A5T4|RS4_MYCS5 RecName: Full=30S ribosomal protein S4
 gi|71851278|gb|AAZ43887.1| 30S ribosomal protein S4 [Mycoplasma synoviae 53]
          Length = 199

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+      K  RR G ++    K  S    R+Y PG HG +R  K S +GL L  KQK+
Sbjct: 1   MSRYTGPLFKKSRRFGYSILETNKEFSKGRKRTYAPGQHGNKR-VKLSDYGLHLYEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  +G +SEK+    +K+A +S+  T   L+  LESRLD +VYRA F  T   ARQ VNH
Sbjct: 60  KLVFG-VSEKQLLKTYKKAVKSKEITGTVLLQLLESRLDNLVYRAGFATTRRQARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  ++G+  NI S + K G  + +K+ S++L  V EA ++       +++    +   T
Sbjct: 119 GHFTIDGKKANIPSMQIKTGTTVVLKETSRKLKLVQEALEMQPAS--AWVT--RKDFQFT 174

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F R+P   +       ++  LVVEFY++
Sbjct: 175 FYRVPERTE---MHKDIKEALVVEFYAK 199


>gi|118626125|emb|CAL41759.1| small ribosomal protein 4 [Mesoptychia sahlbergii]
          Length = 191

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKALKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITVRNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|3914861|sp|O20278|RR4_PILTE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292984|emb|CAA92558.1| ribosomal protein S4 [Pillansia templemannii]
          Length = 195

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +         + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASYPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WIGLKINELLVVEYYSR 193


>gi|42556442|gb|AAS19816.1| small ribosomal protein 4 [Lepicolea ochroleuca]
          Length = 191

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---IDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQNLKIPSHLTFDSTKLCGSITQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 ITLKINELLVVEYYSR 189


>gi|37992555|gb|AAR06456.1| small ribosomal protein 4 [Hookeria acutifolia]
          Length = 199

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIVRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+ V
Sbjct: 58  -ITERQLLNYVRIARRAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K  A + +  +  ++   P +++ +         RI
Sbjct: 117 NNCIVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|157689574|gb|ABV65343.1| ribosomal protein S4 [Thymelaea hirsuta]
          Length = 194

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RAGSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHLLVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I VK + K LA V      +   ++P++++++         +I    
Sbjct: 116 VDIPSYRCKPRDIISVKDEQKSLALVQNYLDSSTHEELPKHLTLHTLQYKGLVNQIIDRK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|49182692|gb|AAT57808.1| small ribosomal protein [Chiloscyphus appalachianus]
          Length = 195

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRXDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|62288935|sp|P69641|RR4_ELYCA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288938|sp|P69644|RR4_HORMA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|7440155|pir||S41269 ribosomal protein S4, chloroplast - Hordeum murinum chloroplast
           (fragment)
 gi|439936|emb|CAA82437.1| ribosomal protein S4 [Elymus canadensis]
 gi|439944|emb|CAA82440.1| ribosomal protein S4 [Hordeum murinum]
          Length = 196

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFNSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|28194677|gb|AAO33600.1|AF480955_1 ribosomal protein S4 [Gymnostomiella monodii]
          Length = 196

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S+    +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            +NI SYRCK  D I +K + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IINIPSYRCKPQDFITIKDRQKSQVLITKNIDFFQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|63101049|gb|AAY33149.1| small ribosomal protein 4 [Oedicladium doii]
          Length = 199

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 LDRK---SIDLKINELLVVEYYSR 197


>gi|328541108|gb|AEB21778.1| ribosomal protein S4 [Bazzania yoshinagana]
          Length = 195

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|304438388|ref|ZP_07398329.1| 30S ribosomal protein S4 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368754|gb|EFM22438.1| 30S ribosomal protein S4 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 197

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 101/207 (48%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G       +S  +TR        +R   K S +GLQL+ KQK K 
Sbjct: 1   MAIDRVPVLKRCRALGLEPATLGRSRQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  +++A +  G T  NL+  LE R+D +V+R     T   ARQ V H H
Sbjct: 55  IYGVL-ERQFRGYYEKAKKMSGVTGENLLCLLERRMDNVVFRLGLANTRRQARQLVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I S    EGDVIEV +KS+  A   E  + +     P +++ +  N+  T 
Sbjct: 114 FTVNGKRVDIPSALVHEGDVIEVAEKSRSGAFFKELKESSNALSAPAWLTADQANLTGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +     V +    +VE YS+
Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197


>gi|46486576|gb|AAS98724.1| ribosomal protein subunit 4 [Hypnodendron spininervium]
          Length = 197

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K +SK    + +     ++  +P +++ +         +I  
Sbjct: 117 HIVDIPSYRCKPQDFITIKDRSKSQTIISKNIDFYQKYKIPNHLTYSSLEKKGFVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|150389493|ref|YP_001319542.1| 30S ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
 gi|172052476|sp|A6TNW5|RS4C_ALKMQ RecName: Full=30S ribosomal protein S4 C
 gi|149949355|gb|ABR47883.1| RNA-binding S4 domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 198

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 114/206 (55%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+         G    R   K S +G+QL  KQK++ 
Sbjct: 1   MAKMMEPRFKLSRRLGVNVYGHPKAM-----NRAGNGSYRGSKKLSNYGIQLLEKQKLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F+    +A +S G T   LI  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 56  YYG-VMEKQFKLYVDKAMQSTGVTGEVLIQSLECRLDNMVYRMGFASSIREARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I SY  K GD + +++KS+Q+   +      E     YI  N + +    V
Sbjct: 115 LLVNGQKVDIPSYGLKLGDEVSLREKSQQVEKYISNFTHFEGQTLSYIDKNIEMLTTKLV 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            IPS  +    P+ +  +LVVE+YSR
Sbjct: 175 AIPSREE---IPIEVNDHLVVEYYSR 197


>gi|157689520|gb|ABV65316.1| ribosomal protein S4 [Melianthus comosus]
          Length = 193

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  + + K  A +          ++P+Y++++         +I  S  
Sbjct: 116 DIPSYRCKPRDIITPRDEPKSRALIQNYLHSSTHEELPKYLTLHPFQYKGLVNQIIDSN- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVGLKINELLVVEYYSR 191


>gi|11121224|emb|CAC14788.1| ribosomal protein subunit 4 [Leucolepis menziesii]
 gi|63191708|gb|AAY34815.1| small ribosomal protein subunit 4 [Leucolepis acanthoneura]
          Length = 198

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 9/204 (4%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPR-RIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 56

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 57  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 115

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I
Sbjct: 116 NDRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI 175

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 176 ---LDRESIDLKINELLVVEYYSR 196


>gi|328541156|gb|AEB21802.1| ribosomal protein S4 [Lepidozia fauriana]
          Length = 195

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +     +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSRSIITKNVNFFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|22091487|emb|CAC86576.1| small ribosomal protein S4 [Cyathophorella tonkinensis]
          Length = 197

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY+CK  D I +K + K  A + +  +  ++  +P +++ N         +I  
Sbjct: 117 SIVDIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|158320966|ref|YP_001513473.1| 30S ribosomal protein S4 [Alkaliphilus oremlandii OhILAs]
 gi|172048008|sp|A8MI45|RS4B_ALKOO RecName: Full=30S ribosomal protein S4 B
 gi|158141165|gb|ABW19477.1| RNA-binding S4 domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 197

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 10/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ R +G N++G PK+         G    R   K S +GLQL  KQK++ 
Sbjct: 1   MAKMMEPRFKLSRSLGVNIYGHPKAMQRA-----GKTAGRASKKLSSYGLQLLEKQKLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    ++A ++ G +   LI  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFVIYVEKAMKASGLSGEALIQSLECRLDNMVYRMGFASSIREARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+  SY  +  D + ++++S+++   L   +    +  +YI  +  +     +
Sbjct: 115 ILVNGKKVDRPSYPIQVDDAVALRERSQKIEKYLSNLKNTTINF-DYIETDVSSFTGRLL 173

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RIP+  +    PV +   LV+EFYS+
Sbjct: 174 RIPNREE---IPVEVNEQLVIEFYSK 196


>gi|3914867|sp|O36052|RR4_PATSQ RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292982|emb|CAA92557.1| ribosomal protein S4 [Patersonia sp. 'Lejeune 1997']
          Length = 196

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 11/202 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGNDLKNQLRSVKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A + +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKVKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIPS 184
           V+I SYRCK  D+I  K K K  A +      +   + ++P +++++         +I  
Sbjct: 116 VDIPSYRCKPQDIITTKDKQKSKALIQNYIASSTQPQEELPNHLTIDPFQYKGLVNQI-- 173

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 174 -RDSKWIGLKINELLVVEYYSR 194


>gi|46486580|gb|AAS98726.1| ribosomal protein subunit 4 [Pterobryella praenitens]
          Length = 200

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P         ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRARIIRRLGALPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + + +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K + K    + +     ++  +P +++ +         +
Sbjct: 117 VNDRIVDIPSYRCKLHDFITIKDRQKSQTIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|16565349|gb|AAL26194.1|AF313586_1 small ribosomal protein 4 [Selaginella deflexa]
          Length = 195

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV++N   
Sbjct: 57  RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVVINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|49182663|gb|AAT57794.1| small ribosomal protein [Acromastigum exile]
          Length = 195

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     S+           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGAPPGLTSKTLKPKSSH---NDRPTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCKPGDIITIRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|67035773|gb|AAY62817.1| small ribosomal protein subunit 4 [Myurium hochstetteri]
          Length = 198

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 NCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|193216910|ref|YP_002000152.1| ribosomal protein S4 [Mycoplasma arthritidis 158L3-1]
 gi|226699091|sp|B3PN46|RS4_MYCA5 RecName: Full=30S ribosomal protein S4
 gi|193002233|gb|ACF07448.1| ribosomal protein S4 [Mycoplasma arthritidis 158L3-1]
          Length = 200

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+   S  K  RR G +L    K  +    R+  PG HG  R+ KPS + L L  KQK+
Sbjct: 1   MSRFLGSIFKKSRRYGISLLENNKEFTKGKKRTTAPGQHGA-RRVKPSDYQLHLYEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG ++E++F+ ++  A + +G T   L+  +ESRLD +V+RA F  T   ARQFVNH
Sbjct: 60  RYMYG-LNERQFKHLYSIASKKQGVTGVILLQMIESRLDNLVFRAGFARTRAQARQFVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  V+G   NI S   K G VIE+K   +    V +A +     V  +++    +   T
Sbjct: 119 GHFTVDGHKANIPSMVIKVGSVIEMKPSLQTSPQVKDAVEAM--TVSPWLT--KTDFKVT 174

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F R+P   +   +   +   L+VE+Y+R
Sbjct: 175 FNRLPERKE---FAKDINEALIVEYYNR 199


>gi|49182736|gb|AAT57830.1| small ribosomal protein [Jungermannia crenuliformis]
          Length = 195

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGTLPGLTGKTLKPKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +     +  +  
Sbjct: 117 VDIPSYSCQLGDIITVKNKQKSQSMITKNINLFQKLKIPSHLTFDSIELRGYVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|111283698|gb|ABH09199.1| small ribosomal protein 4 [Tylimanthus saccatus]
          Length = 191

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+      Y   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTSKALKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C  GD+I VK + K  + +++   L ++  +P +++ +   +     +  +
Sbjct: 117 DIVDIPSYNCGPGDIITVKNERKSQSMIIKNINLFQKSKIPSHLTFDSTELRGFVNQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVE 202
                   + +   LVVE
Sbjct: 177 R---EWIDLKINELLVVE 191


>gi|85001767|gb|ABC68421.1| small ribosomal protein 4 [Pyramidula tetragona]
          Length = 196

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGVLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A R++G T   L+  LE RLD +V+R    PTI  ARQ VNHRHVLVN  
Sbjct: 57  ERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +    +++  VP +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDSITIKNRQKSQAIITKNIDFSQKYKVPNHLTFDSVQKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|67035805|gb|AAY62833.1| small ribosomal protein subunit 4 [Bryocrumia andersonii]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|260903836|ref|ZP_05912158.1| 30S ribosomal protein S4 [Brevibacterium linens BL2]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++L+ KQ+++  YG I E 
Sbjct: 2   TRVSRALGMPLTPKAEKYFERRPYPPGEHGRARRRNDSDYSVRLKEKQRLRAQYG-IREA 60

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +    +KEA R  G T   ++  LE RLD +V R+ F  TI  ARQFV HRH+ V+G+ V
Sbjct: 61  QMLKTYKEASRLSGLTGETMVELLEMRLDALVLRSGFARTIAQARQFVVHRHITVDGQRV 120

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  S+R KEG  I+V ++S  +     A+    +D    VP Y++VN + +  T +R P 
Sbjct: 121 DRPSFRVKEGQTIQVHERSASMDPFQVAAAGGHKDVLPAVPGYLNVNLEGLQTTLLRRPK 180

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV +   LVVE YSR
Sbjct: 181 REE---VPVTVDVQLVVEHYSR 199


>gi|167957551|ref|ZP_02544625.1| ribosomal protein S4 [candidate division TM7 single-cell isolate
           TM7c]
          Length = 205

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++  S   K  RR G  L  +    +  +S  PG H   R+ KPS +  QLR KQK+++
Sbjct: 1   MARDTSPIVKQSRREGYALHPKAHKIMVRKSGIPGEHAHGRQGKPSLYLTQLREKQKVRR 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F  + KEA R +G    NL+  LE RLD  VYRA F  +  AARQ V+H H
Sbjct: 61  TYG-LLEKQFSRLMKEATRKKGLAGENLLQLLERRLDNAVYRAGFASSRRAARQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ---LASVLEASQLAERDVPEYISVNHDNMVA 177
            ++NGR V+I S R K GD I V+ KS +      + +  + + +    ++  +   +  
Sbjct: 120 FILNGRRVDIPSIRLKAGDEISVRPKSTKSGYFTHIDDIVKNSNQTALSWMKSDVKGLKF 179

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    P   +  P    +   L+VE+YSR
Sbjct: 180 SITGNPKREEAEP---DINEQLIVEYYSR 205


>gi|146261591|gb|ABQ15105.1| ribosomal protein S4 [Sedum rubrotinctum]
          Length = 195

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR
Sbjct: 56  ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLSMASTIPGARQLVNHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I  K   K    +  +       ++P++++++         +I  S
Sbjct: 116 IVDIPSYRCKPSDIITAKDDKKSRTLIQNSIDSTPHEELPKHLTLHVFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---GVGLKINELLVVEYYSR 193


>gi|67035809|gb|AAY62835.1| small ribosomal protein subunit 4 [Juratzkaeella sinensis]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ YYG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFYYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQQKFEAIISKNIDFYQKSKIPNHLTYSSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESTGLKINELLVVEYYSR 197


>gi|548868|sp|P36459|RR4_FESPR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439942|emb|CAA82439.1| ribosomal protein S4 [Festuca pratensis]
          Length = 196

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKNKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQTLMASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|227496183|ref|ZP_03926489.1| ribosomal protein S4 [Actinomyces urogenitalis DSM 15434]
 gi|226834266|gb|EEH66649.1| ribosomal protein S4 [Actinomyces urogenitalis DSM 15434]
          Length = 207

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 8/196 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L  +       R YGPG HG+ R+   S + ++L+ KQ+++  YG I E + + +F
Sbjct: 16  LGIPLTPKAVRYFEKRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 74

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +EA R +G T  +L+  LE RLD +V RA F  TI  ARQ V HRH+LV+G+ V+  S+R
Sbjct: 75  EEARREKGLTGESLVELLEMRLDALVLRAGFARTIAQARQDVVHRHILVDGKVVDRPSFR 134

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190
            K G  I+V+ +S+ +     A+    RD    VPEY++V  + + AT VR P   +   
Sbjct: 135 VKPGQTIQVRPRSQVMVPFQIAAAGTHRDVLPAVPEYLTVELEKLSATLVRRPKRDE--- 191

Query: 191 YPVIMQPNLVVEFYSR 206
            PV     +VVE+YSR
Sbjct: 192 VPVTCDVQMVVEYYSR 207


>gi|67035925|gb|AAY62889.1| small ribosomal protein subunit 4 [Campylophyllum halleri]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDFIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|37960617|gb|AAP70678.1| small ribosomal protein 4 [Sphagnum teres]
          Length = 195

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFITIKDQQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|46486590|gb|AAS98731.1| ribosomal protein subunit 4 [Mniodendron fuscomucronatum]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G  L    K+          ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALLGLTNKTAQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNHVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|47606912|gb|AAT36376.1| ribosomal protein subunit 4 [Lopidium concinnum]
          Length = 200

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 7/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       KS    +     ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           NG  V+I SYRCK  D I +K K K  + + +  +  ++  +  +++ +         +I
Sbjct: 118 NGYIVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LDRESIGLKINELLVVEYYSR 198


>gi|118626023|emb|CAL39328.1| small ribosomal protein 4 [Tetralophozia setiformis]
          Length = 191

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|157689424|gb|ABV65268.1| ribosomal protein S4 [Bixa orellana]
          Length = 192

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 9/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTSKRP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRFHYG-LAERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D+I  + + K  A +      +   ++P++++++         +I      
Sbjct: 116 IPSYRCKPRDIICARDEKKSRALIQNYLDSSTPEELPKHLTLHTLQYKGLVNQIIDRK-- 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 -WVGLKINELLVVEYYSR 190


>gi|46486574|gb|AAS98723.1| ribosomal protein subunit 4 [Touwiodendron diversifolium]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYQIPNHLTYSSLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L +    + +   LVVE+YSR
Sbjct: 177 ---LNNELIGLKINELLVVEYYSR 197


>gi|67036046|gb|AAY62949.1| small ribosomal protein subunit 4 [Homalothecium sericeum]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVSLQLXEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|295112126|emb|CBL28876.1| SSU ribosomal protein S4P [Synergistetes bacterium SGP1]
          Length = 198

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R   + K+ R +G N+ G PK+     +  P   GQ+     S + LQL  KQK+K 
Sbjct: 1   MATRREPRFKLSRHLGVNVCGHPKAMKRVDTKKPARGGQK----VSQYALQLMEKQKIKA 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG I E++F   FK A +S   T   L+  LE RLD +VYR  F  +I  ARQ V+H H
Sbjct: 57  YYG-ILERQFARYFKIAKKSTEMTGVALLKNLECRLDNLVYRIGFARSIRQARQMVSHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L+NG  V+I S   K  DVI +K+KS+   +     Q        Y+  + +   A  +
Sbjct: 116 ILLNGVKVDIPSCNVKVNDVISLKEKSRTNETFQNNFQGLASFSVPYLEKDKNQFSAKLI 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R P   +    P+ +   L VE YS+
Sbjct: 176 REPMREE---LPIEVNEILAVELYSK 198


>gi|222103494|gb|ACM44276.1| small ribosomal protein subunit 4 [Entodon flavescens]
          Length = 203

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSENIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|80974156|gb|ABB53771.1| small ribosomal subunit protein 4 [Garovaglia subelegans]
          Length = 200

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKTKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SYRCK  D I VK +      + +     ++  +P +++           +
Sbjct: 117 VNDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNK 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|12642210|gb|AAK00187.1| rps4 [Timmia austriaca]
          Length = 195

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|27227935|gb|AAN85765.1| ribosomal protein subunit 4 [Anomobryum prostratum]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKIPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKNRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|262066971|ref|ZP_06026583.1| ribosomal protein S4 [Fusobacterium periodonticum ATCC 33693]
 gi|291379319|gb|EFE86837.1| ribosomal protein S4 [Fusobacterium periodonticum ATCC 33693]
          Length = 195

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +         + R   P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYAIQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI S+R K GDV+ V + SK +  +  A + A    P ++ ++        +
Sbjct: 115 IAVNGRRVNIASFRVKVGDVVSVIENSKNVELIKLAVEDA--TAPAWLELDKAAFSGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|67036050|gb|AAY62951.1| small ribosomal protein subunit 4 [Oxyrrhynchium rugosipes]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L   LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITMKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVTQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|150008959|ref|YP_001303702.1| 30S ribosomal protein S4 [Parabacteroides distasonis ATCC 8503]
 gi|149937383|gb|ABR44080.1| 30S ribosomal protein S4 [Parabacteroides distasonis ATCC 8503]
          Length = 172

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 71/163 (43%), Positives = 101/163 (61%), Gaps = 2/163 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + +I R+ GE ++G  K  ++ ++Y PG HG  RK K S +G+QLR KQK K 
Sbjct: 1   MARYTGPRTRIARKFGEAIFGADK-VLSKKNYPPGQHGNSRKRKTSEYGIQLREKQKAKY 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR++F++A RS+G T   L+  LE RLD +VYR    PT  AARQ V+HRH
Sbjct: 60  TYGVL-EKQFRNLFEKASRSKGITGEVLLQLLEGRLDNVVYRLGIAPTRAAARQLVSHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
           + V+G  VNI SY  K G VI V++KSK +  + +A       
Sbjct: 119 ITVDGSVVNIPSYSVKPGQVIGVREKSKSMEVIADALSGFNHS 161


>gi|17025812|gb|AAL32073.1| ribosomal protein 4 [Syrrhopodon armatus]
          Length = 198

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGILSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              +NI SY+CK  D I +K + K    +++    + +  +P +++ N         +I 
Sbjct: 117 NHIINIPSYQCKPQDFITIKDQQKHQTMIVKNINFSPKHKIPNHLTFNSVEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQEAIGLKINELLVVEYYSR 196


>gi|171743071|ref|ZP_02918878.1| hypothetical protein BIFDEN_02197 [Bifidobacterium dentium ATCC
           27678]
 gi|171278685|gb|EDT46346.1| hypothetical protein BIFDEN_02197 [Bifidobacterium dentium ATCC
           27678]
          Length = 208

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T + +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGRTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           + +    PV +    VVEFY+R
Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208


>gi|49182778|gb|AAT57851.1| small ribosomal protein [Plagiochila austinii]
          Length = 195

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMYIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VNIPSYNCEPGDIITIGNKQKSRSIVTKNISSFQKLKIPSHLTFDSTQLQGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|3914862|sp|O20280|RR4_ROMRE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292992|emb|CAA92559.1| ribosomal protein S4 [Romulea revelieri]
          Length = 195

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     T   ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTNPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K K  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQKSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WIGLKINELLVVEYYSR 193


>gi|67036042|gb|AAY62947.1| small ribosomal protein subunit 4 [Okamuraea hakoniensis]
          Length = 199

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|37548831|gb|AAO32684.1| ribosomal protein 4 [Alophosia azorica]
          Length = 192

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P +  SY   +       K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGALPGLTSKTPXSKSSY---IDRSXSNKKXSQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A  ++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I
Sbjct: 57  LKYVRIARGAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHIXINDGIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY C+ GD I +K + K  A + +   L ++  +P +++ +         +  +     
Sbjct: 117 PSYXCQPGDFITIKNRQKSQAIITKNIBLFQKFKIPXHLTFDSSEXXGXVNQTINR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 WIDLKINELLVVEYYSR 190


>gi|157689436|gb|ABV65274.1| ribosomal protein S4 [Capparis flexuosa]
          Length = 193

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I VK + K    V       A +++P++++++         +I     
Sbjct: 116 DIPSYRCKPQDIITVKDEQKSRTLVQNLLDSSAHQELPKHLTLHTFQYEGLVNQIIDRK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --CVGLKINELLVVEYYSR 191


>gi|3098192|gb|AAC15544.1| small ribosomal protein 4 [Bartramia stricta]
          Length = 199

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGLRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I
Sbjct: 117 NDHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|11121109|emb|CAC14741.1| ribosomal protein subunit 4 [Bryum billardierei]
          Length = 199

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALTGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67036016|gb|AAY62934.1| small ribosomal protein subunit 4 [Rhynchostegium riparioides]
          Length = 199

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ +NHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLINHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIIGKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|189095326|ref|YP_001936339.1| 30S ribosomal protein S4 [Heterosigma akashiwo]
 gi|157694669|gb|ABV65945.1| 30S ribosomal protein S4 [Heterosigma akashiwo]
 gi|157777900|gb|ABV70086.1| 30S ribosomal protein S4 [Heterosigma akashiwo]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           MS+    + KI RR+G  L G  ++  + R   PG HG+   K K   + L+L  KQK+K
Sbjct: 1   MSRYRGPRVKILRRLG-PLSGLTQNGESIRKRSPGQHGKIIGKQKIGPYNLRLLEKQKLK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG ++EK+  +  K+A R +G T   L+  LE RLDT+ +R  +  +I A+RQ VNH 
Sbjct: 60  YNYG-VTEKQLLNYVKKARRIKGATGLQLLQMLEMRLDTVAFRLGWGNSIPASRQLVNHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LVN R VNI S+ CK GD + +K+K      ++ A+       P+++ ++   +    
Sbjct: 119 HILVNDRKVNIPSFICKPGDKLTLKEKIATNKQIISANSTY----PKFLELDKSKINGIV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I S      + + +   L+VE+YSR
Sbjct: 175 KEIVSR---EDFTISVDELLIVEYYSR 198


>gi|28194853|gb|AAO33688.1|AF481043_1 ribosomal protein S4 [Tortella flavovirens]
          Length = 196

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    L+  ++    S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSSINQLNSNKK---ISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|24473824|gb|AAL82755.1| small ribosomal subunit protein 4 [Brachymenium angolense]
          Length = 198

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|63100999|gb|AAY33124.1| small ribosomal protein 4 [Tomentypnum falcifolium]
          Length = 198

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|92417457|gb|ABE76824.1| ribosomal protein subunit 4 [Pottia truncata]
          Length = 200

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    S     +      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R VNI SYRCK  D I + ++ K    + +     ++  +P +++ N         +
Sbjct: 117 VNNRIVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDQESIGLKINELLVVEYYSR 198


>gi|29422393|gb|AAO84592.1| small ribosomal protein 4 [Breutelia affinis]
          Length = 197

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K P    S    ++      K   + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKXPQLKSSS---INQSTSNKKIXQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I  
Sbjct: 117 RIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLXINELLVVEYYSR 195


>gi|83314082|gb|ABC02210.1| small ribosomal subunit protein 4 [Garovaglia powellii]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+ V
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIFV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  DVI VK +      + +     ++  +P +++           +I
Sbjct: 117 NDCIVNIPSYRCKPQDVIIVKNEKNSEGVINKNEDFHQKYKIPNHLTYIFLEKKGLVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035990|gb|AAY62921.1| small ribosomal protein subunit 4 [Dicladiella cubensis]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 2   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 57

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 58  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 117

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 118 DCMVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 177 --LDRESIGLKINELLVVEYYSR 197


>gi|24473820|gb|AAL82753.1| small ribosomal subunit protein 4 [Brachymenium globosum]
 gi|63191695|gb|AAY34809.1| small ribosomal protein subunit 4 [Osculatia columbica]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPCVRIIRRLGALPGLTSKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A + +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNINLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|323359962|ref|YP_004226358.1| ribosomal protein S4 [Microbacterium testaceum StLB037]
 gi|323276333|dbj|BAJ76478.1| ribosomal protein S4 [Microbacterium testaceum StLB037]
          Length = 209

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 75/201 (37%), Positives = 108/201 (53%), Gaps = 8/201 (3%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K ++ R +G  L  +    +  R Y PG HG+ ++   S + ++LR KQ++++ YG I E
Sbjct: 10  KVRLSRALGVALTPKAARYLEKRPYAPGEHGRTKRKADSDYAVRLREKQRLREQYG-IRE 68

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+ R  F EA R+ G T  NL+  LE RLD +V R+ F  T   ARQ V HRH+LV+G+ 
Sbjct: 69  KQLRIAFNEARRTDGLTGENLVELLEMRLDALVVRSGFARTTAQARQLVVHRHILVDGQL 128

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIP 183
           V+  S+R K G  I VK KS+ L     A+     +    VP Y+ V+   + A  VR P
Sbjct: 129 VDRPSFRVKPGQQIHVKPKSEGLEPFQVAAAGGHAEVLPPVPGYLEVDLSTLQAKLVRRP 188

Query: 184 SSLKDVPYPVIMQPNLVVEFY 204
              +    PV     LVVE+Y
Sbjct: 189 KRAE---VPVTCDVQLVVEYY 206


>gi|47606922|gb|AAT36381.1| ribosomal protein subunit 4 [Ptychomnion aciculare]
          Length = 200

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SYRCK  D I +K +      + +     ++  +P +++ +         +
Sbjct: 117 VNDSIVNIPSYRCKPQDFIIIKDEKNYEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNK 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIGLKINELLVVEYYSR 198


>gi|27227945|gb|AAN85770.1| ribosomal protein subunit 4 [Bryum coronatum]
          Length = 198

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ V+HRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIINKNLNLYQKYKTPNHLTYNFLKKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|42556506|gb|AAS19848.1| small ribosomal protein 4 [Temnoma pilosum]
 gi|118626067|emb|CAL41753.1| small ribosomal protein 4 [Pseudolepicolea quadrilaciniata]
          Length = 191

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINNYIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GDVI V+ K K  + + +   L ++  +P +++++   +  +  +  +      
Sbjct: 117 SYNCKPGDVITVRNKQKSQSIITKNINLFQKLKIPNHLTLDSTQLRGSINQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLQINELLVVEYYSR 189


>gi|67036052|gb|AAY62952.1| small ribosomal protein subunit 4 [Squamidium brasiliense]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D + +K + K    + +  +  ++  +P +++           +I
Sbjct: 117 NDCIVDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|6002037|emb|CAA58926.1| ribosomal protein S4 [Coix lacryma-jobi]
          Length = 196

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNQKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN R V+I S+RCK  D+I  K   +    V      ++   +P++++V+        
Sbjct: 116 ILVNDRIVDIPSFRCKPRDIITTKDNQRSKRLVQNYIASSDPGKLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196


>gi|63191811|gb|AAY34865.1| small ribosomal protein subunit 4 [Bellibarbula recurva]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLSNKIPDLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +  + K    V +    +++  +P +++ N         ++
Sbjct: 117 NNRIVNIPSYRCKPQDFITINDRKKSQVMVTKNVDFSQKSKIPNHLTFNSLEKKGLINQV 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|6002021|emb|CAA58917.1| ribosomal protein S4 [Elymus repens]
          Length = 196

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G     +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNPKKKFNSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQNYIASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|47606928|gb|AAT36384.1| ribosomal protein subunit 4 [Pyrrhobryum latifolium]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197


>gi|62287263|sp|Q6H9K2|RR4_EQUVA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927219|emb|CAE47545.1| small ribosomal protein 4 [Equisetum variegatum]
          Length = 207

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+ +NL G     V ++        Q  + K S +G++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V++ S+ CK  D+I +       + + +  +  A+  VPE++++         
Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGSPKTYQSILTKRIESFAKDQVPEHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|306450772|gb|ADM88645.1| small ribosomal protein 4 [Parisia laevipila]
          Length = 197

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I VK + K  A +++    +++  VP +++           +I  
Sbjct: 117 RIVNIPSYRCKPQDFITVKNRQKSQAMIIKNIDFSQKYKVPNHLTFGSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|269795072|ref|YP_003314527.1| 30S ribosomal protein S4P [Sanguibacter keddieii DSM 10542]
 gi|269097257|gb|ACZ21693.1| SSU ribosomal protein S4P [Sanguibacter keddieii DSM 10542]
          Length = 205

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + ++ R +G  L  +       R Y PG HG+ R+   S + ++LR KQ+++ 
Sbjct: 1   MTRSRR-QVRLSRALGIALTPKAVKHFEKRPYPPGEHGRARRRTESDYAVRLREKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+    F+EA ++ G T   L+  LE RLD +V RA F  T   ARQ V HRH
Sbjct: 60  QYG-LREKQMARAFEEARKAPGLTGEALVELLEVRLDALVLRAGFARTTLQARQAVVHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176
           +LV+G+ V+  S++ K G  ++VK KS+ +     A+  A RD    VP Y++V+ + + 
Sbjct: 119 ILVDGKIVDRPSFKVKPGQTVQVKPKSQSMTPFQVAAAGAHRDVLPAVPGYLTVSLEKLS 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               R P   +    PV  +  LVVE YSR
Sbjct: 179 FVLSRSPKRAE---VPVTCEVQLVVEHYSR 205


>gi|222103486|gb|ACM44272.1| small ribosomal protein subunit 4 [Anomodon minor]
          Length = 197

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|62288936|sp|P69642|RR4_FESGI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439940|emb|CAA82438.1| ribosomal protein S4 [Festuca gigantea]
 gi|439950|emb|CAA82442.1| ribosomal protein S4 [Lolium perenne]
          Length = 196

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNGR VNI S+RCK  D+I  K   +    V      ++   +P++++++        
Sbjct: 116 ILVNGRIVNIPSFRCKPRDIITTKDNQRSKGLVQTLMASSDPGKLPKHLTIDTLEYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 NKILDRK---WVGLKINELLVVEY 196


>gi|63191857|gb|AAY34888.1| small ribosomal protein subunit 4 [Streptocalypta tortelloides]
          Length = 198

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRLRIIRRLGILPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSFEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|46486588|gb|AAS98730.1| ribosomal protein subunit 4 [Dendro-hypnum auricomum]
          Length = 199

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G  L    K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNHVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLERKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|11228615|gb|AAG33093.1| small ribosomal protein 4 [Arctoa fulvella]
          Length = 191

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K   K  A +++    +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNCQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67035652|gb|AAY62757.1| small ribosomal protein subunit 4 [Hypnodontopsis spathulatus]
          Length = 202

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+          ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 9   CRIIRRLGTLPGLTNKTSQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 64

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 65  QLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGLAPTIPGARQLVNHRHILVNDCIV 124

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    +++    +++  VP +++ N         +I   L 
Sbjct: 125 NIPSYRCKPQDSITIKDRQKSQTMIIKNLDFSQKTKVPNHLTFNFLEKKGLVNQI---LD 181

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 182 QESIGLKINELLVVEYYSR 200


>gi|63191851|gb|AAY34885.1| small ribosomal protein subunit 4 [Tuerckheimia valeriana]
          Length = 199

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVYFSQKYKIPNHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|37548881|gb|AAO32709.1| ribosomal protein 4 [Polytrichum brachymitrium]
          Length = 194

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CKIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 57  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|320534363|ref|ZP_08034849.1| ribosomal protein S4 [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133405|gb|EFW25867.1| ribosomal protein S4 [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 210

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L  +       R YGPG HG+ R+   S + ++L+ KQ+++  YG I E + + +F
Sbjct: 19  LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 77

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +EA R +G T  +L+  LE RLD +V R+    TI  ARQ V HRH+LV+G+ V+  SYR
Sbjct: 78  EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 137

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190
            K G  I+V+ +S+ +     A+  A RD    VPEY++V+ + + AT VR P   +   
Sbjct: 138 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPEYLNVDLEKLSATLVRRPKRDE--- 194

Query: 191 YPVIMQPNLVVEFYSR 206
            PV     +VVE+YSR
Sbjct: 195 VPVTCDVQMVVEYYSR 210


>gi|49182706|gb|AAT57815.1| small ribosomal protein [Gackstroemia weindorferi]
          Length = 195

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKILKLKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++      TI  ARQ VNHRH+ +N  +
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMASTIPGARQLVNHRHISINNET 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY C+ GD+I ++   K  + +        + ++P +++ +   +  +  +I    
Sbjct: 117 VNIPSYNCEPGDIITIRNSEKSQSIITTNMNSFYKSEIPNHLTFDSTQLRGSINKIIHR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVDLKVNELLVVEYYSR 193


>gi|37960583|gb|AAP70661.1| small ribosomal protein 4 [Sphagnum cuspidatum]
          Length = 195

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDDSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|18568422|gb|AAL76080.1| ribosomal protein system 4 [Hypnum cupressiforme]
          Length = 198

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L+N
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|157689412|gb|ABV65262.1| ribosomal protein S4 [Anisoptera marginata]
          Length = 191

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 12/200 (6%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P   ++       Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRPKAGKN-------QSRPGKKSQYRIRLEEKQKLRFHYG-LTE 52

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 53  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRI 112

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  +   K  A +      A   ++P++++++         +I    
Sbjct: 113 VDIPSYRCKPRDIISARDGQKSRALIQNYLDSAIPEELPKHLTLHTLQYKGLVNQIIDRK 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 ---WVGLKINELLVVEYYSR 189


>gi|328541084|gb|AEB21766.1| ribosomal protein S4 [Telaranea herzogii]
          Length = 197

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       K+     SY           K S + ++L  KQK++ YYG +
Sbjct: 1   GPRVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKISQYRIRLEEKQKLRFYYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  +       TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILCLGMARTIPGARQLVNHRHIPIND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I ++ K K  + + +   L +   +P +++++         +  +
Sbjct: 117 NIVDIPSYNCEPGDIITIRDKQKSQSVITKNMNLFQNLKIPNHLTLDSIKSCGFVNQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWINLKINELLVVEYYSR 195


>gi|67035807|gb|AAY62834.1| small ribosomal protein subunit 4 [Eulacophyllum cultelliforme]
          Length = 199

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P ++  +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|306835269|ref|ZP_07468301.1| 30S ribosomal protein S4 [Corynebacterium accolens ATCC 49726]
 gi|304568862|gb|EFM44395.1| 30S ribosomal protein S4 [Corynebacterium accolens ATCC 49726]
          Length = 178

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/182 (36%), Positives = 103/182 (56%), Gaps = 6/182 (3%)

Query: 26  PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
               R Y PG  G+ R  +  Y  LQL+ KQK K  YG + E++FR  + EA+R  G T 
Sbjct: 2   AFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKYTYGVL-ERQFRRYYTEANRLPGKTG 59

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            NL+  LE+RLD +VYRA    T   ARQ V+H H  VNG+++NI SYR  + D+I+V+ 
Sbjct: 60  DNLVILLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKNINIPSYRVTQYDIIDVRP 119

Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           +S+++    +A   L + +VP ++ V  D +     ++P   +     + +Q  L+VE Y
Sbjct: 120 RSQKMEWFEDAQDALIDANVPAWLQVVPDTLRILVHQLPERAQ---IDIPLQEQLIVELY 176

Query: 205 SR 206
           S+
Sbjct: 177 SK 178


>gi|37548861|gb|AAO32699.1| ribosomal protein 4 [Pogonatum microstomum]
          Length = 195

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   CKIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 58  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHKHILVNDRIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L 
Sbjct: 118 NIPSYRCKPQDFITIKNRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIGLKINELLVVEYYSR 193


>gi|67036114|gb|AAY62983.1| small ribosomal protein subunit 4 [Caribaeohypnum polypterum]
          Length = 199

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|328541158|gb|AEB21803.1| ribosomal protein S4 [Lepidozia sp. 2 Shaw 5789]
          Length = 195

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|67035582|gb|AAY62722.1| small ribosomal protein subunit 4 [Oreas martiana]
          Length = 194

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGKVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK + K  A +++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITVKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|63191732|gb|AAY34826.1| small ribosomal protein subunit 4 [Braunia secunda]
          Length = 198

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 9/204 (4%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRI-RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 56

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 57  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 115

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I
Sbjct: 116 NDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKSKIPNHLTYNSLKKKGLVNQI 175

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 176 ---LDRELIGLKINELLVVEYYSR 196


>gi|227502698|ref|ZP_03932747.1| ribosomal protein S4 [Corynebacterium accolens ATCC 49725]
 gi|227076428|gb|EEI14391.1| ribosomal protein S4 [Corynebacterium accolens ATCC 49725]
          Length = 178

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/182 (36%), Positives = 103/182 (56%), Gaps = 6/182 (3%)

Query: 26  PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
               R Y PG  G+ R  +  Y  LQL+ KQK K  YG + E++FR  + EA+R  G T 
Sbjct: 2   AFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKYTYGVL-ERQFRRYYTEANRLPGKTG 59

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            NL+  LE+RLD +VYRA    T   ARQ V+H H  VNG+++NI SYR  + D+I+V+ 
Sbjct: 60  DNLVILLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKNINIPSYRITQYDIIDVRP 119

Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           +S+++    +A   L + +VP ++ V  D +     ++P   +     + +Q  L+VE Y
Sbjct: 120 RSQKMEWFEDAQDALIDANVPAWLQVVPDTLRILVHQLPERAQ---IDIPLQEQLIVELY 176

Query: 205 SR 206
           S+
Sbjct: 177 SK 178


>gi|89147820|gb|ABD62758.1| ribosomal protein 4 [Metzgeria pubescens]
          Length = 199

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRTKIIRRLGALPGLTSKTFKLKSSY---IDRSAPNKKISQYRVRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +
Sbjct: 58  -LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRI 182
           N   V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +    + +  R+
Sbjct: 117 NKDIVDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRM 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWIDLKINELLVVEYYSR 197


>gi|46811060|gb|AAT01848.1| small ribosomal protein 4 [Treubia lacunosoides]
          Length = 197

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGILPGLTNKTLKSKLGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVGIARKAKGSTGEVLLQLLEMRLDNIIFRLGLAFTIPGARQLVNHRHILINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184
           ++V+I SY CK  D+I +K K      + +    + +  +P +++ +    +    +I  
Sbjct: 117 KTVDIPSYHCKPKDLITIKNKPTSQLLITKNIDYSTKSQIPNHLTFDSVKKIGLVNQIID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EFINLKINELLVVEYYSR 195


>gi|329946640|ref|ZP_08294052.1| ribosomal protein S4 [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328526451|gb|EGF53464.1| ribosomal protein S4 [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 207

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 8/196 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L  +       R YGPG HG+ R+   S + ++L+ KQ+++  YG I E + + +F
Sbjct: 16  LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 74

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +EA R +G T  +L+  LE RLD +V R+    TI  ARQ V HRH+LV+G+ V+  SYR
Sbjct: 75  EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 134

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190
            K G  I+V+ +S+ +     A+  A RD    VP+Y++V+ + + AT VR P   +   
Sbjct: 135 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPDYLNVDLEKLSATLVRRPKRDE--- 191

Query: 191 YPVIMQPNLVVEFYSR 206
            PV     +VVE+YSR
Sbjct: 192 VPVTCDVQMVVEYYSR 207


>gi|118411052|ref|YP_874447.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum]
 gi|125987752|sp|A0T0H2|RR4_PHATC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|116739799|gb|ABK20670.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum]
          Length = 203

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMK 59
           MS+    K KI RR+G       K     +   PG  G     K  + +G++L  KQK+K
Sbjct: 1   MSRYRGPKLKISRRLGTLPGLTTKKS--NKLNRPGKDGNTDIGKKLTEYGVRLEEKQKLK 58

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG ++EK+     KEA R +G T   L+  LE RLDT+ +   F  ++  ARQ VNH 
Sbjct: 59  FNYG-LTEKQLFRYVKEARRRQGVTGLILLQLLEMRLDTLCFTLGFAKSLAQARQLVNHG 117

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178
           H+ +N + V+I S++C+  D+I +K+KS     V    +  + R++P ++  +   + A 
Sbjct: 118 HITINKKVVSIPSFQCRLNDIISIKEKSSSKTLVETNIKNNQVREIPTHLRFDTVKLEAI 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +            + +   LV+E YSR
Sbjct: 178 VLDYCDRND---VSLQLDELLVIEHYSR 202


>gi|24473836|gb|AAL82762.1| small ribosomal subunit protein 4 [Bryum cellulare]
          Length = 199

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGVLPGLTNKIPQLKTNL---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|326773291|ref|ZP_08232574.1| ribosomal protein S4 [Actinomyces viscosus C505]
 gi|326636521|gb|EGE37424.1| ribosomal protein S4 [Actinomyces viscosus C505]
          Length = 210

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L  +       R YGPG HG+ R+   S + ++L+ KQ+++  YG I E + + +F
Sbjct: 19  LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 77

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +EA R +G T  +L+  LE RLD +V R+    TI  ARQ V HRH+LV+G+ V+  SYR
Sbjct: 78  EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 137

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190
            K G  I+V+ +S+ +     A+  A RD    VPEY++V+ + + AT VR P   +   
Sbjct: 138 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPEYLNVDLEKLSATLVRRPKRDE--- 194

Query: 191 YPVIMQPNLVVEFYSR 206
            PV     +VVE+YSR
Sbjct: 195 VPVTCDVQMVVEYYSR 210


>gi|157689550|gb|ABV65331.1| ribosomal protein S4 [Reseda lutea]
          Length = 195

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P   R     L  Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTSKRPRAGR----DLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR
Sbjct: 56  ERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSLTIPQARQLVNHRHILVNGR 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I VK + K    +       A  ++P++++++         +I   
Sbjct: 116 IVDIPSYRCKPRDIITVKNEQKSRTLIQNFLDSSAAEELPKHLTLHTFQYEGLVNQIIDR 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---CIGLKINELLVVEYYSR 193


>gi|67035821|gb|AAY62841.1| small ribosomal protein subunit 4 [Isocladiella surcularis]
          Length = 198

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I ++ + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCMVDIPSYRCKPQDFITIRNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|157689518|gb|ABV65315.1| ribosomal protein S4 [Manihot esculenta]
          Length = 193

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RVGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-VTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  + + K  A +      + + ++P++++++         +I  S  
Sbjct: 116 DIPSYRCKPRDIITARDEQKSRAMIQNDLDSSPQEELPKHLTLHPFQYKGLVNQIIDSK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVGLKINELLVVEYYSR 191


>gi|308189877|ref|YP_003922808.1| 30S ribosomal protein S4 [Mycoplasma fermentans JER]
 gi|307624619|gb|ADN68924.1| 30S ribosomal protein S4 [Mycoplasma fermentans JER]
          Length = 198

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           +      K  RR G ++    K  S    R+Y PG HG +R  K S +GL L  KQK+K 
Sbjct: 2   RYRGPVFKKSRRYGFSILETGKEFSKGRKRTYAPGQHGDKR-VKLSDYGLHLYEKQKVKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+    +  A + +G T   L+  LESRLD +VYRA F  T   ARQ V+H H
Sbjct: 61  LYG-LNEKQMHKYYIRATKIKGVTGTVLLQLLESRLDNLVYRAGFASTRRQARQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             +NG   +I S   + G  I++K+KS++   +     L +R   +++++       ++ 
Sbjct: 120 FTLNGHKADIPSMNVEVGSKIQLKEKSQKNKIIEAN--LKDRSAAKWLTI--KGFEVSYD 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    ++ N +VEFYS+
Sbjct: 176 RLPDRSELHP---EIKENFIVEFYSK 198


>gi|257453243|ref|ZP_05618542.1| 30S ribosomal protein S4 [Fusobacterium sp. 3_1_5R]
 gi|257467162|ref|ZP_05631473.1| 30S ribosomal protein S4 [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918293|ref|ZP_07914533.1| SSU ribosomal protein S4P [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059777|ref|ZP_07924262.1| SSU ribosomal protein S4P [Fusobacterium sp. 3_1_5R]
 gi|313685453|gb|EFS22288.1| SSU ribosomal protein S4P [Fusobacterium sp. 3_1_5R]
 gi|313692168|gb|EFS29003.1| SSU ribosomal protein S4P [Fusobacterium gonidiaformans ATCC 25563]
          Length = 195

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + RS  P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRNLGIDPVILGVNKSSNRSLRP-----NANRKPTEYAIQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR ++ EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKLYDEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI SYR K GDVI V + SK L  +  A   A  + P ++ ++        +
Sbjct: 115 ITVNGRRVNIASYRVKVGDVIAVVENSKNLEIIKSAVDTA--NAPAWLQLDKAAFAGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|63145908|gb|AAY33892.1| small ribosomal protein 4 [Jensenia spinosa]
          Length = 199

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G  L G     + +RS            K S + ++L  KQK++ +YG +
Sbjct: 3   GPRAKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-L 58

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+L+N 
Sbjct: 59  TERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILIND 118

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184
             VNI SY CK  DVI +K + +  + + +   L  E+ +P +++ +      +  +I  
Sbjct: 119 DIVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVNQIID 178

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 179 R---EWISLKINELLVVEYYSR 197


>gi|46811038|gb|AAT01837.1| small ribosomal protein 4 [Petalophyllum ralfsii]
          Length = 197

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G           +  SY   ++      K S + ++L  KQK++ +YG +
Sbjct: 1   GPRAKVIRRLGALPGLTDGILASKFSY---INRSASSKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNH H+ ++G
Sbjct: 57  TERQLLRYVRIAREAKGSTGRVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIAIDG 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +V+I SY  K GDVI +K + +  + +      +++  +P +++++      +  ++  
Sbjct: 117 NTVDIPSYNRKPGDVITIKNRRESQSIITRNMSSSQKPKIPNHLTLDSAQFRGSVDQVID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 RD---WMNLKINELLVVEYYSR 195


>gi|63191714|gb|AAY34817.1| small ribosomal protein subunit 4 [Pohlia nutans]
          Length = 196

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRFARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I   
Sbjct: 117 LVDIPSYRCKPQDFITIKDQQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIDLKINELLVVEYYSR 194


>gi|23334986|ref|ZP_00120224.1| COG0522: Ribosomal protein S4 and related proteins [Bifidobacterium
           longum DJO10A]
 gi|23465460|ref|NP_696063.1| 30S ribosomal protein S4 [Bifidobacterium longum NCC2705]
 gi|189439486|ref|YP_001954567.1| 30S ribosomal protein S4 [Bifidobacterium longum DJO10A]
 gi|213692483|ref|YP_002323069.1| RNA-binding S4 domain protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|227545937|ref|ZP_03975986.1| ribosomal protein S4 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239622015|ref|ZP_04665046.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296454013|ref|YP_003661156.1| RNA-binding S4 domain-containing protein [Bifidobacterium longum
           subsp. longum JDM301]
 gi|312132891|ref|YP_004000230.1| rpsd [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482221|ref|ZP_07941243.1| ribosomal protein S4 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688955|ref|YP_004208689.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis
           157F]
 gi|322690924|ref|YP_004220494.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|26399353|sp|P59127|RS4_BIFLO RecName: Full=30S ribosomal protein S4
 gi|226697806|sp|B3DSF0|RS4_BIFLD RecName: Full=30S ribosomal protein S4
 gi|254764570|sp|B7GSB1|RS4_BIFLI RecName: Full=30S ribosomal protein S4
 gi|23326113|gb|AAN24699.1| 30S ribosomal protein S4 [Bifidobacterium longum NCC2705]
 gi|189427921|gb|ACD98069.1| Ribosomal protein S4 [Bifidobacterium longum DJO10A]
 gi|213523944|gb|ACJ52691.1| RNA-binding S4 domain protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|227213571|gb|EEI81420.1| ribosomal protein S4 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239515206|gb|EEQ55073.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291517007|emb|CBK70623.1| SSU ribosomal protein S4P [Bifidobacterium longum subsp. longum F8]
 gi|296183444|gb|ADH00326.1| RNA-binding S4 domain protein [Bifidobacterium longum subsp. longum
           JDM301]
 gi|311773864|gb|ADQ03352.1| RpsD [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916359|gb|EFV37759.1| ribosomal protein S4 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455780|dbj|BAJ66402.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320458628|dbj|BAJ69249.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320460291|dbj|BAJ70911.1| 30S ribosomal protein S4 [Bifidobacterium longum subsp. infantis
           157F]
          Length = 208

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + +++R KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRDRRRTESDYAVRMREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++A R+ G T + +++ LE+RLD +V RA F  T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKATRTAGQTGNAMLTDLETRLDNLVLRAGFARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLPSLKATVTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV +    VVEFY+R
Sbjct: 190 VEE---IPVQVNIQYVVEFYAR 208


>gi|83416500|gb|ABC18270.1| small ribosomal subunit protein 4 [Dicranum scoparium]
          Length = 196

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|307828394|gb|ADN94995.1| small ribosomal protein 4 [Fossombronia wattsii]
          Length = 198

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K+ RR+G       +       Y   L   ++ S+   + ++L  KQK++ +YG 
Sbjct: 1   RGPRAKMIRRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+
Sbjct: 57  LTERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVD 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
             +VNI SY CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  ++ 
Sbjct: 117 DDTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQMI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 177 DRD---WINLKINELLVVEYYSR 196


>gi|222103522|gb|ACM44290.1| small ribosomal protein subunit 4 [Entodon flavescens]
          Length = 203

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSENIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|89147832|gb|ABD62764.1| ribosomal protein 4 [Metzgeria furcata]
          Length = 198

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRTKIIRRLGALPGLTSKTFKSKSSY---IDKPASNKKISQYRVRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N
Sbjct: 57  LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIP 183
              V+I SY C+ GD+I +K + +  ++++E     ++  +P +++ +    + +  R+ 
Sbjct: 117 KDIVDIPSYNCELGDIITIKNQERYRSNIMERLNSLQKPGIPNHLAFDSTKFIGSVNRMI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWIDLKINELLVVEYYSR 196


>gi|80974140|gb|ABB53763.1| small ribosomal subunit protein 4 [Euptychium dumosum]
          Length = 202

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITEQQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTISGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   VNI SYRCK  D I VK +      + +     ++  +P +++           +
Sbjct: 119 VNDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLVNK 178

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 179 I---LDRESIGLKINELLVVEYYSR 200


>gi|189485111|ref|YP_001956052.1| 30S ribosomal protein S4 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226695096|sp|B1GZA9|RS4_UNCTG RecName: Full=30S ribosomal protein S4
 gi|170287070|dbj|BAG13591.1| 30S ribosomal protein S4 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 208

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGR-----PKSPVNTR--SYGPGLHGQRRKSKPSYFGLQLR 53
           MS+   S  K+ RR  E L+ +         +N +     PG HG   K K S +   LR
Sbjct: 1   MSRYLGSVCKLCRREKEKLFLKGERCSSNCALNRKRGKNSPGQHGAS-KVKMSDYAKHLR 59

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK ++ YG ++E++F + +K A++ +G    NL+  LE RLD +VYR     +   AR
Sbjct: 60  EKQKARRMYG-LTEEQFSNYYKTAEKMKGSAGDNLLKLLELRLDNVVYRLGLASSKKMAR 118

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173
           Q VNH ++LVN + +++  YR K GDVI   +K K    + +  +     +P ++S +  
Sbjct: 119 QIVNHGNILVNEKKIDVPRYRLKIGDVITFPEKYKSNVIIKKLIEKMVSSIPAWLSFDKS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  T V  P + +       +   L+VE+YS+
Sbjct: 179 RIAGTVVSEPLAGETSH---PINSQLIVEYYSK 208


>gi|18568424|gb|AAL76081.1| ribosomal protein system 4 [Stereophyllum radiculosum]
          Length = 198

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|3098182|gb|AAC15539.1| small ribosomal protein 4 [Mielichhoferia bryoides]
 gi|63191712|gb|AAY34816.1| small ribosomal protein subunit 4 [Mielichhoferia bryoides]
          Length = 198

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I  R+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIXRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I 
Sbjct: 117 NRLVDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIDLKINELLVVEYYSR 196


>gi|146261565|gb|ABQ15092.1| ribosomal protein S4 [Hamamelis japonica]
          Length = 194

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RTGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  + + K  A +      +   ++P++++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|21914150|gb|AAM81297.1| ribosomal protein subunit 4 [Plagiobryum algovicum]
 gi|63191693|gb|AAY34808.1| small ribosomal protein subunit 4 [Rosulabryum albolimbatum]
          Length = 198

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|63078642|gb|AAY29407.1| ribosomal protein S4 [Trichostomum crispulum var. angustifolium]
          Length = 197

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVIITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|325068848|ref|ZP_08127521.1| 30S ribosomal protein S4 [Actinomyces oris K20]
          Length = 207

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L  +       R YGPG HG+ R+   S + ++L+ KQ+++  YG I E + + +F
Sbjct: 16  LGIPLTPKAVRYFERRPYGPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREAQLQRVF 74

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +EA R +G T  +L+  LE RLD +V R+    TI  ARQ V HRH+LV+G+ V+  SYR
Sbjct: 75  EEARRGQGLTGESLVELLEMRLDALVLRSGIARTIAQARQDVVHRHILVDGKVVDRPSYR 134

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSSLKDVP 190
            K G  I+V+ +S+ +     A+  A RD    VPEY++V+ + + AT VR P   +   
Sbjct: 135 VKPGQTIQVRPRSQVMVPFQVAAAGAHRDVLPPVPEYLNVDLEKLSATLVRRPKRDE--- 191

Query: 191 YPVIMQPNLVVEFYSR 206
            PV     +VVE+YSR
Sbjct: 192 VPVTCDVQMVVEYYSR 207


>gi|66866233|gb|AAY57786.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
          Length = 205

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 13/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 2   YRGPRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 59  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVA 177
           N R V+I SYRCK  D I +K + K  A +         D      +P +++ N      
Sbjct: 118 NNRIVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNLDFYQKYKIPNHLTYNSLEKKG 177

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I   L      + +   LVVE+YSR
Sbjct: 178 LVNQI---LDRESIGLKINELLVVEYYSR 203


>gi|67035710|gb|AAY62786.1| small ribosomal protein subunit 4 [Saelania glaucescens]
          Length = 194

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A V++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 HESIGLKINELLVVEYYSR 192


>gi|228017217|gb|ACP52037.1| ribosomal protein S4 [Pinus leiophylla var. chihuahuana]
          Length = 201

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+            N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKXXXGLXXXXXXNRK----DXMNRSSSRKISQYRIRLEEKQKLRY 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WINLKINELLVVEYYSR 199


>gi|67036124|gb|AAY62988.1| small ribosomal protein subunit 4 [Bissetia lingulata]
          Length = 198

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIIDKNIEFYQKSKIPNHLTYSSLEKKGLINQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|300870623|ref|YP_003785494.1| 30S ribosomal protein S4 [Brachyspira pilosicoli 95/1000]
 gi|300688322|gb|ADK30993.1| 30S ribosomal protein S4 [Brachyspira pilosicoli 95/1000]
          Length = 208

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENL------WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR    L          K  +  +   PG   ++ K    Y G+Q+R 
Sbjct: 1   MARYRDASCRLCRREKMKLMLKGERCLTAKCAITKKREVPGPTNRKMKQLSEY-GIQMRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG I EK+FR+ + EA+R  G T  NL+  LE RLD +VYR     +   ARQ
Sbjct: 60  KQKVKRIYG-ILEKQFRNYYHEANRVAGVTGENLLRLLELRLDNVVYRLGLAKSRAQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173
           FV H  + VNG+++++ SY  K GD +   Q+   +  V E     + + VP ++S++  
Sbjct: 119 FVQHGFINVNGKTMSVPSYSMKVGDKVSFSQRGNSITQVKELLDGLKSEYVPAWLSLDLS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 V +P   + + YP  +   L++E+YS+
Sbjct: 179 AKQGEIVTLPIR-EHIEYP--INEQLIIEYYSK 208


>gi|37548855|gb|AAO32696.1| ribosomal protein 4 [Pogonatum cirratum]
          Length = 198

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 5   CKIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITER 60

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   V
Sbjct: 61  QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIV 120

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
            I SYRCK  D I +K + +  A + +    +++  +P +++ N  +      +I   L 
Sbjct: 121 TIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLDKKGLVNQI---LD 177

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 178 RESIGLKINELLVVEYYSR 196


>gi|86438878|emb|CAJ55409.1| small ribosomal protein 4 [Plagiochila chonotica]
          Length = 192

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ 
Sbjct: 58  G-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHIS 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N   V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  +
Sbjct: 117 INNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLV 200
           + +        + +   LV
Sbjct: 177 MINR---EWINLKINELLV 192


>gi|261337327|ref|ZP_05965211.1| ribosomal protein S4 [Bifidobacterium gallicum DSM 20093]
 gi|270277700|gb|EFA23554.1| ribosomal protein S4 [Bifidobacterium gallicum DSM 20093]
          Length = 208

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++   + G T + +++ LE+RLD +V RA    T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGIARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKPKSQTMVPFQIAAEGVHRDVLPPVPGYLDVNLPSLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           + +    PV +    VVEFY+R
Sbjct: 190 AEE---IPVQVNIQYVVEFYAR 208


>gi|118411185|ref|YP_874579.1| 30S ribosomal protein S4 [Thalassiosira pseudonana]
 gi|125987754|sp|A0T0W7|RR4_THAPS RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|116739932|gb|ABK20802.1| 30S ribosomal protein S4 [Thalassiosira pseudonana]
          Length = 205

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 10/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQR---RKSKPSYFGLQLRAKQK 57
           MS+    K +I RR+G+      K     ++  PG HG+     K K + +G++L  KQK
Sbjct: 1   MSRYRGPKLRITRRLGDLPGLTQKKS--KKTTRPGQHGKNLGEGKKKTTEYGIRLEEKQK 58

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +K  YG ISE +     KEA R  G T   L+  LE RLDTI +   + PTI AARQ VN
Sbjct: 59  LKFNYG-ISENQLYHYIKEARRRNGVTGLILLQLLEMRLDTICFSLGYAPTIAAARQLVN 117

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE-YISVNHDNMV 176
           H H++VN + ++I S++C+ GDVI +K KS     +    +      P  +++ N + + 
Sbjct: 118 HGHIIVNDKVIDIPSFQCQIGDVIGIKSKSPAKKIIENNLKTINFSAPPAHLTFNKEKLE 177

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +     +    V+E+YSR
Sbjct: 178 GVVQNYCDRSELLLDLNELL---VIEYYSR 204


>gi|37960575|gb|AAP70657.1| small ribosomal protein 4 [Sphagnum angustifolium]
 gi|37960589|gb|AAP70664.1| small ribosomal protein 4 [Sphagnum fuscum]
 gi|37960597|gb|AAP70668.1| small ribosomal protein 4 [Sphagnum portoricense]
 gi|37960599|gb|AAP70669.1| small ribosomal protein 4 [Sphagnum pulchrum]
 gi|37960601|gb|AAP70670.1| small ribosomal protein 4 [Sphagnum quinquefarium]
 gi|37960607|gb|AAP70673.1| small ribosomal protein 4 [Sphagnum squarrosum]
 gi|37960613|gb|AAP70676.1| small ribosomal protein 4 [Sphagnum subnitens]
 gi|37960619|gb|AAP70679.1| small ribosomal protein 4 [Sphagnum wulfianum]
          Length = 195

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|170761244|ref|YP_001788735.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree]
 gi|169408233|gb|ACA56644.1| 30S ribosomal protein S4 [Clostridium botulinum A3 str. Loch Maree]
          Length = 197

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+              R   K S +G QL  KQK++ 
Sbjct: 1   MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRE-----NSREGKKLSNYGKQLLEKQKIRS 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K+A +S+  T   L+  LE RLD IVYR  F  +I  ARQ VNH H
Sbjct: 56  YYGVL-EKQFLRYIKKAMKSKERTGDVLLRSLECRLDNIVYRIGFSSSIRQARQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  +NI SY  K GD+I +++K ++     +     ++    YI  ++D      +
Sbjct: 115 ILVNGGKINIPSYAVKIGDIITLREKYRKNDEFADNFLALKKFSLPYIEKDYDKFSGVLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P  ++    P+     LVVE YS+
Sbjct: 175 KEPERVE---IPIDANETLVVELYSK 197


>gi|67035851|gb|AAY62852.1| small ribosomal protein subunit 4 [Colobodontium vulpinum]
          Length = 199

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGILPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQQKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|296129661|ref|YP_003636911.1| ribosomal protein S4 [Cellulomonas flavigena DSM 20109]
 gi|296021476|gb|ADG74712.1| ribosomal protein S4 [Cellulomonas flavigena DSM 20109]
          Length = 208

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS    S+   ++ R +G  L  +       R Y PG HG+ R+   S + ++LR KQ++
Sbjct: 1   MSSVTRSRRQVRLSRALGLALTPKAVKHFEKRPYPPGEHGRARRRTESDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y  + EK+    ++ A ++ G T   L+  LE+RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQYA-LREKQLAKAYENARKAPGLTGEALVEDLETRLDALVLRAGFARTILQARQTVTH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174
           RHVLV+G+ V+  S+R KEG  +++K KS+       A+  A RD    VP Y+ V  + 
Sbjct: 120 RHVLVDGKIVDRPSFRVKEGQTLQIKPKSQATVPFQVAAAGAHRDVLPAVPGYLEVQLEK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + AT VR P   +    PV  +  LVVE+Y+R
Sbjct: 180 LSATLVRRPKRAE---VPVTCEVQLVVEYYAR 208


>gi|12642234|gb|AAK00199.1| rps4 [Aphanorrhegma serratum]
          Length = 190

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 9/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     S       Q    K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGVLPGLTNKTLQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQLL 55

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V+I 
Sbjct: 56  NYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIP 115

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I VK + K  A + +    +++  VP +++ +         +I   L    
Sbjct: 116 SYRCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRES 172

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 173 IGLKINELLVVEYYSR 188


>gi|66866241|gb|AAY57789.1| small ribosomal protein 4 [Antitrichia californica]
          Length = 207

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 13/210 (6%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTFNKKISQYRIRLEEKQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMV 176
           VN   V+I SYRCK  D I +K + K  A +      +     ++  +P +++ +     
Sbjct: 119 VNNCIVDIASYRCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I   L      + +   LVVE+YSR
Sbjct: 179 GLVNQI---LDRESIGLKINELLVVEYYSR 205


>gi|63191767|gb|AAY34843.1| small ribosomal protein subunit 4 [Cyrtopodendron vieillardii]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRARIIRRLGALPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + + +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRISRKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P +++ +         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKNRQKSQTIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|78369605|gb|ABB43032.1| ribosomal protein 4 [Syrrhopodon tristichus]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKILRRLGTLSGLTIKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY+CK  D I +K + K    +++ +    +   P ++  N         +I
Sbjct: 117 NNRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTSFFPKYKTPNHLIFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|238928129|ref|ZP_04659889.1| ribosomal protein S4 [Selenomonas flueggei ATCC 43531]
 gi|238884089|gb|EEQ47727.1| ribosomal protein S4 [Selenomonas flueggei ATCC 43531]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G       +S  +TR        +R   K S +GLQL+ KQK K 
Sbjct: 1   MAIDRVPVLKRCRALGLEPATLGRSRQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  +++A +  G T  NL+  LE R+D +V+R     T   ARQ V H H
Sbjct: 55  IYGVL-ERQFRGYYEKAKKMSGVTGENLLCLLERRMDNVVFRLGLANTRRQARQLVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I S   +EGDVIEV +KS+  A   E  + +     P +++ +  N+  T 
Sbjct: 114 FTVNGKRVDIPSALVREGDVIEVAEKSRSGAFFKELKESSNALSAPAWLTADQANLTGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +     V +    +VE YS+
Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197


>gi|309322067|ref|YP_003933885.1| ribosomal protein S4 [Erodium texanum]
 gi|197131480|gb|ACH47258.1| ribosomal protein S4 [Erodium texanum]
 gi|300069160|gb|ADJ66282.1| ribosomal protein S4 [Erodium texanum]
          Length = 220

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 30/227 (13%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P   +   P         K   + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKKIRRLGALPGLTSKIPKGKKPETP-----SPFKKKKQYHIRLEEKQKLRF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 56  HYG-LTERQLLQYVRLAGKAKGQTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----------------- 163
           +LVNGR V+I SYRCK  D+I  ++K K    +      + R                  
Sbjct: 115 ILVNGRIVDIPSYRCKPRDIITGREKEKSRTLIQNYLDSSSRKRNSLDSSSRKRKKLAKP 174

Query: 164 ----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                P +++           +I          + ++  LVVE+YSR
Sbjct: 175 NHLTTPNHLTTQQGQQRGLVNKIIDR---ESVGLEIKELLVVEYYSR 218


>gi|49182811|gb|AAT57867.1| small ribosomal protein [Tetralophozia setiformis]
          Length = 195

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISVNNDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY  K GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYSRKSGDIITIRNKQKSQSIITKNINLFQKSKIPSHLTFDLTQLRGSVNQTVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|63191833|gb|AAY34876.1| small ribosomal protein subunit 4 [Syntrichia ruralis]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LNQESIGLKINELLVVEYYSR 197


>gi|156598667|gb|ABU85589.1| ribosomal protein S4 [Scaevola aemula]
          Length = 232

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 42/239 (17%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       KS      Y      Q+   K S +  +L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGTLPGLSTKSV-----YDLSEKEQKPPWKKSLYCTRLQEKQKLRF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G+T   L+  LE RLD I++R    PT+  ARQ VNH+H
Sbjct: 56  HYG-LTERQLLKYVRIAGKAKGETGQVLLQLLEMRLDNILFRLGMAPTLPGARQLVNHKH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------ 162
           +LVNGR VNI SYRCK  D IE +   K  A + +     ++                  
Sbjct: 115 ILVNGRIVNIPSYRCKPRDTIEARDDQKSRALIQKNLAARKKYLGAKAKKYSNSHKSIRG 174

Query: 163 ---------------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                          +VP ++++          RI          + +   LVVE+YSR
Sbjct: 175 QKRIEKEIKIEKKRKEVPGHLTIQPLQYKGLVKRIIDR---ESVGLTINELLVVEYYSR 230


>gi|17025816|gb|AAL32075.1| ribosomal protein 4 [Syrrhopodon croceus]
 gi|78369615|gb|ABB43037.1| ribosomal protein 4 [Syrrhopodon croceus]
          Length = 198

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K      S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLSGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SY+CK  D I +K + K    +++  + + +  +P +++ N         +I 
Sbjct: 117 NNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKIPNHLTFNSVEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|319777073|ref|YP_004136724.1| 30S ribosomal protein s4 [Mycoplasma fermentans M64]
 gi|318038148|gb|ADV34347.1| 30S ribosomal protein S4 [Mycoplasma fermentans M64]
          Length = 198

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 11/206 (5%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           +      K  RR G ++    K  S    R+Y PG HG +R  K S +GL L  KQK+K 
Sbjct: 2   RYRGPVFKKSRRYGFSILETGKEFSKGRKRTYAPGQHGDKR-VKLSDYGLHLYEKQKVKY 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+    +  A + +G T   L+  LESRLD +VYRA F  T   ARQ V+H H
Sbjct: 61  LYG-LNEKQMHKYYIRATKIKGVTGTVLLQLLESRLDNLVYRAGFASTRRQARQLVSHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             +NG   +I S   + G  I++K+KS++   +     L +R   +++++       ++ 
Sbjct: 120 FTLNGHKADIPSMNVEVGSKIQLKEKSQKNKIIEAN--LKDRSAAKWLTI--KGFEVSYD 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    ++ N +VE YS+
Sbjct: 176 RLPDRSELHP---EIKENFIVELYSK 198


>gi|42556446|gb|AAS19818.1| small ribosomal protein 4 [Lepidogyna hodgsoniae]
          Length = 191

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTPKQKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHILINNETVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++   K  + +        + ++P +++++   +  +  ++        
Sbjct: 117 SYNCEPGDIITIRNGEKSQSIITRNMDSFHKLEIPNHLTLDSKKLQGSINKMIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VDLKVNELLVVEYYSR 189


>gi|37992431|gb|AAR06394.1| small ribosomal protein 4 [Beeveria distichophylloides]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGILPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +   +  +P +++ N         +I
Sbjct: 117 NKFIVDIPSYRCKPQDFITIKNQRKSEAIINKNIEFYPKSKIPNHLTYNFLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|37992467|gb|AAR06412.1| small ribosomal protein 4 [Crossomitrium epiphyllum]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K      S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+L+
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K K K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDFLVDIPSYRCKSQDFITIKNKQKSKTIISKNIEFYQKYKIPNHLTYNFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|67035847|gb|AAY62850.1| small ribosomal protein subunit 4 [Pterogoniopsis cylindrica]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCMVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|46811058|gb|AAT01847.1| small ribosomal protein 4 [Treubia lacunosa]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGVLPGLTNKTLKSKLGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVGIARKAKGSTGEVLLQLLEMRLDNIIFRLGLAFTIPGARQLVNHRHILINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           ++V+I SY CK  D+I +K K      + +    + +  +P +++ +    +    +I  
Sbjct: 117 KTVDIPSYHCKPKDLITIKNKPTSQLLITKNIDYSTKYKIPNHLTFDSVKKIGLVNQIID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EFINLKINELLVVEYYSR 195


>gi|24473804|gb|AAL82745.1| small ribosomal subunit protein 4 [Leptostomum menziesii]
          Length = 196

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +V+R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|49182726|gb|AAT57825.1| small ribosomal protein [Isotachis lyallii]
          Length = 195

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD I V+ + K  + + +   L     +P +++ +   +     +  +  
Sbjct: 117 VDIPSYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ELINLKINELLVVEYYSR 193


>gi|37960573|gb|AAP70656.1| small ribosomal protein 4 [Sphagnum affine]
 gi|37960609|gb|AAP70674.1| small ribosomal protein 4 [Sphagnum steerei]
          Length = 195

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +  +Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|222103484|gb|ACM44271.1| small ribosomal protein subunit 4 [Leucodon pendulus]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + ++ RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRVIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|222103544|gb|ACM44301.1| small ribosomal protein subunit 4 [Climacium japonicum]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P ++  +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|222103430|gb|ACM44244.1| small ribosomal protein subunit 4 [Oxystegus tenuirostris]
          Length = 202

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S            K S + ++L  KQK++ +YG 
Sbjct: 5   RGPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG- 60

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 61  ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 120

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I 
Sbjct: 121 NRIVNIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI- 179

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 180 --LDQELIGLKINELLVVEYYSR 200


>gi|63191745|gb|AAY34832.1| small ribosomal protein subunit 4 [Goniobryum subbasilare]
          Length = 198

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I 
Sbjct: 117 DRIVDIPSYRCKPQDFITIKDQQKYQTIISKNIYFYQKYKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|31544739|ref|NP_853317.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. R(low)]
 gi|41017821|sp|Q7NAV0|RS4_MYCGA RecName: Full=30S ribosomal protein S4
 gi|31541585|gb|AAP56885.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. R(low)]
 gi|284930807|gb|ADC30746.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. R(high)]
 gi|284931289|gb|ADC31227.1| 30S ribosomal protein S4 [Mycoplasma gallisepticum str. F]
          Length = 207

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 10/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAKQ 56
           MS+   S ++  RR+  ++    K   N +S      PG HG   + K S +G QL+ KQ
Sbjct: 1   MSRYTGSIYRKARRLNFSILESGKEFTNNKSKKGVKVPGQHGSLIRPKLSNYGEQLQEKQ 60

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           KM+  YG +++++FR +F  + +  G  + NL   LESRLD +V+R  F PT   ARQ V
Sbjct: 61  KMQFMYG-LNDRQFRRLFAVSKKMSGILTMNLFRTLESRLDNLVFRMGFAPTRRGARQLV 119

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
           +H HVLVNG++ +I S     G V+E+K ++  L  V  A +   + V  ++ VN   + 
Sbjct: 120 SHGHVLVNGKTFDIPSALISLGSVVELKPRAHNLPLVKLALES--KAVAPFVEVNKKTLS 177

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T+VR P   +    P  +    VVE+Y R
Sbjct: 178 GTYVRYPERNE---LPADVNETYVVEYYKR 204


>gi|63145917|gb|AAY33896.1| small ribosomal protein 4 [Symphyogyna marginata]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG +
Sbjct: 1   GPRAKIIRRLGA-LPGXSYEMIGSRSGYTNQLATNKK--ISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH++VN 
Sbjct: 57  TERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184
            +VNI SY CK  DVI +K + +  + + +   L  ER +P +++ +      +  +I  
Sbjct: 117 NAVNIPSYNCKPQDVITIKDRRESQSVITKNIHLFRERKIPNHLTFDSTRFCGSVNQIID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWISLKINELLVVEYYSR 195


>gi|42556498|gb|AAS19844.1| small ribosomal protein 4 [Scapania undulata]
          Length = 191

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +  K K  + + +   L ++  +P +++ +   +     +  +      
Sbjct: 117 SYNCEPGDIITIGNKQKSQSIITKNLNLFQKLKIPSHLTFDLAQLQGYVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|67035801|gb|AAY62831.1| small ribosomal protein subunit 4 [Neolindbergia cladomnioides]
          Length = 198

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQLTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|320093741|ref|ZP_08025600.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319979326|gb|EFW10817.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 207

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 9/211 (4%)

Query: 1   MSKRESSK-HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M+K  S K  +  R +G  L  +       R YGPG HG+ R+ + S + ++L+ KQ+++
Sbjct: 1   MAKNRSRKQVRESRALGLALTPKAVRYFEKRPYGPGEHGRSRRRQDSDYAVRLKEKQRLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E + R  F+EA R+ G T  NL+  LE R+D +V RA    TI  ARQFV HR
Sbjct: 61  AQYG-IREAQLRRAFEEARRTAGLTGENLVELLEMRIDALVLRAGIARTIQQARQFVVHR 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNM 175
           H+LV+G+ V+  S+R   G  ++VK KS+       A+Q   RD    VP+Y+ V+ + +
Sbjct: 120 HILVDGKIVDRPSFRVNPGQTLQVKPKSQTTVPFEIAAQGIHRDVLPQVPDYLDVDLERL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            AT VR P   +    PV     +VVE YSR
Sbjct: 180 KATLVRRPKRAE---VPVTCDVQMVVEHYSR 207


>gi|116010489|emb|CAL37351.1| ribosomal protein S4 [Gentiana cruciata]
          Length = 194

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKGP----RAGTDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVN   
Sbjct: 56  RQLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNSHI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K    + ++   +   ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITAKTEQKSRGLIQKSLDSSPHEELPSHLTLHPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|63078577|gb|AAY29375.1| ribosomal protein S4 [Pleurochaete luteola]
 gi|63078579|gb|AAY29376.1| ribosomal protein S4 [Pleurochaete luteola]
 gi|63078587|gb|AAY29380.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078589|gb|AAY29381.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078593|gb|AAY29383.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078595|gb|AAY29384.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078597|gb|AAY29385.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078599|gb|AAY29386.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078607|gb|AAY29390.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078632|gb|AAY29402.1| ribosomal protein S4 [Tortella nitida]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|63078640|gb|AAY29406.1| ribosomal protein S4 [Trichostomum brachydontium var. cuspidatum]
 gi|63078644|gb|AAY29408.1| ribosomal protein S4 [Trichostomum pallidisetum]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|62287267|sp|Q6H9L2|RR4_EQUGI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927199|emb|CAE47535.1| small ribosomal protein 4 [Equisetum giganteum]
          Length = 207

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+ +NL G     V ++        Q  + K S +G++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V++ S+ CK  D+I +       + + +  +  A+  +PE++++         
Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRIESFAKDQIPEHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|20531079|gb|AAM27361.1| ribosomal protein 4 [Diphyscium chiapense]
          Length = 194

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 2   KIIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VN
Sbjct: 58  LLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVN 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    +++    +++  +P +++++         +I   L  
Sbjct: 118 IPSYRCKPQDFITIKDRQKSQNIIVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LDR 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 ESIGLKINELLVVEYYSR 192


>gi|269956478|ref|YP_003326267.1| 30S ribosomal protein S4 [Xylanimonas cellulosilytica DSM 15894]
 gi|269305159|gb|ACZ30709.1| ribosomal protein S4 [Xylanimonas cellulosilytica DSM 15894]
          Length = 208

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  +       R Y PG HG+ R+   S + ++LR KQ+++  Y  + EK
Sbjct: 11  VRLSRALGIALTPKAVKHFEKRPYPPGEHGRARRRTESDYAVRLREKQRLRAQYA-LREK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +   +++ A ++ G T   ++  LE+RLD +V RA F  TI  ARQ V HRH+L++G+ V
Sbjct: 70  QLVKVYENARKTAGLTGEVMVEDLETRLDALVLRAGFARTILQARQTVTHRHILIDGKIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  S+R K G  ++VK KS+       A+  A RD    VP Y+ V  + + AT  R P 
Sbjct: 130 DRPSFRVKPGQTLQVKPKSQTTTPFQVAAAGAHRDVLPAVPGYLEVQLEKLQATLTRRPK 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV  +  LVVEFY+R
Sbjct: 190 RAE---VPVTCEVQLVVEFYAR 208


>gi|42556444|gb|AAS19817.1| small ribosomal protein 4 [Lepicolea scolopendra]
          Length = 191

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNKEKSQSIITKNINLFQNLKIPSHLTFDSTKLRGSITQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 ITLKINELLVVEYYSR 189


>gi|17025853|gb|AAL32092.1| ribosomal protein 4 [Mitthyridium sp. Wall 3885]
          Length = 198

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I 
Sbjct: 117 NNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|85001769|gb|ABC68422.1| small ribosomal protein 4 [Goniomitrium acuminatum]
          Length = 196

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGVLPGLSNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A R++G T   L+  LE RLD +V+R    PTI  ARQ VNHRHVLVN  
Sbjct: 57  ERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +    +++  VP +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNRQKSQAIITKNIDFSQKYKVPNHLTFDSVQKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|308233884|ref|ZP_07664621.1| 30S ribosomal protein S4 [Atopobium vaginae DSM 15829]
 gi|328943591|ref|ZP_08241056.1| 30S ribosomal protein S4 [Atopobium vaginae DSM 15829]
 gi|327491560|gb|EGF23334.1| 30S ribosomal protein S4 [Atopobium vaginae DSM 15829]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++           +N +S       ++R+ + S +G QLR KQK K 
Sbjct: 1   MAIDRTPVLKRCRQLEIEPVVMG---INKKSN---RQPRQRRRQLSEYGTQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+FR  + +A ++ G T  NL+S LE+RLD +V+R  F  T   +RQ + H H
Sbjct: 55  IYG-ILEKQFRGYYTKAMKAEGITGDNLMSLLETRLDNVVFRLGFARTRKESRQTIRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+ K  DVI V  K+K L  + E+  ++ER  VP ++ V+ + +    
Sbjct: 114 ITVNGKRVDIPSYQVKADDVIAVSSKAKDLLPIKESLIVSERMAVPAWLEVDVEKLQGKV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++IP   +     + +   L+VE YS+
Sbjct: 174 LQIPVRDQ---IDLDIDAQLIVELYSK 197


>gi|37992463|gb|AAR06410.1| small ribosomal protein 4 [Cladomniopsis crenatoobtusa]
          Length = 199

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K K      + + + L ++  +P +++ +         +I
Sbjct: 117 NDYIVNIPSYRCKPQDFILIKNKKNSEVVIDKNTDLYQKYKIPNHLTYSSLEKKGLVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|224282905|ref|ZP_03646227.1| 30S ribosomal protein S4 [Bifidobacterium bifidum NCIMB 41171]
 gi|310287348|ref|YP_003938606.1| SSU ribosomal protein S4P [Bifidobacterium bifidum S17]
 gi|311064189|ref|YP_003970914.1| 30S ribosomal protein S4P RpsD [Bifidobacterium bifidum PRL2010]
 gi|313140064|ref|ZP_07802257.1| 30S ribosomal protein S4 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251284|gb|ADO53032.1| SSU ribosomal protein S4P [Bifidobacterium bifidum S17]
 gi|310866508|gb|ADP35877.1| RpsD SSU ribosomal protein S4P [Bifidobacterium bifidum PRL2010]
 gi|313132574|gb|EFR50191.1| 30S ribosomal protein S4 [Bifidobacterium bifidum NCIMB 41171]
          Length = 208

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + ++LR KQ+++  YG +SEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYG-VSEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + RS +++A R+ G T + +++ LE RLD +V RA    T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRSAYEKATRTAGQTGNAMLTDLEVRLDNLVLRAGIARTTAQARQFVVHRHILVDGNIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+V+ KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVRAKSQTMVPFQIAAEGVHRDVLPPVPGYLDVNLASLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV +    VVEFY+R
Sbjct: 190 VEE---IPVQVNIQYVVEFYAR 208


>gi|145848875|emb|CAJ91114.1| ribosomal protein S4 [Acrocladium chlamydophyllum]
          Length = 196

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|49182756|gb|AAT57840.1| small ribosomal protein [Marsupidium latifolium]
          Length = 195

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K       Y   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKVLKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C  GD+I VK + K  + +++   L ++  +P +++ +   +     +  +  
Sbjct: 117 VDIPSYNCGPGDIITVKNERKSQSMIIKNINLFQKSKMPSHLTFDSTELRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIDLKINELLVVEYYSR 193


>gi|37548887|gb|AAO32712.1| ribosomal protein 4 [Polytrichum subpilosum]
          Length = 194

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CKIIRRLGAFPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 57  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|20531085|gb|AAM27364.1| ribosomal protein 4 [Diphyscium suzukii]
          Length = 193

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VN
Sbjct: 57  LLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    +++    +++  +P +++++         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKDRQKSQDIIVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|48927211|emb|CAE47541.1| small ribosomal protein 4 [Equisetum ramosissimum subsp. debile]
          Length = 207

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+ +NL G     V ++        Q  + K S +G++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKKKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V++ S+ CK  D+I +       + + +  +  A+  +PE++++         
Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|67035998|gb|AAY62925.1| small ribosomal protein subunit 4 [Toloxis imponderosa]
          Length = 197

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 CMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|52783272|sp|Q6H9L1|RR4_EQUHY RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927201|emb|CAE47536.1| small ribosomal protein 4 [Equisetum hyemale]
          Length = 207

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 112/210 (53%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+ +NL G     V ++        Q  + K S +G++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKKKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V++ S+ CK  D+I ++      + + +  +  A+  +PE++++         
Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIEAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|37960587|gb|AAP70663.1| small ribosomal protein 4 [Sphagnum cymbifolioides]
          Length = 195

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +  +Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFISIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|46486558|gb|AAS98715.1| ribosomal protein subunit 4 [Bescherellia elegantissima]
          Length = 198

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I 
Sbjct: 117 NCIVDIASYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|63078611|gb|AAY29392.1| ribosomal protein S4 [Tortella arctica]
 gi|63078613|gb|AAY29393.1| ribosomal protein S4 [Tortella arctica]
 gi|63078630|gb|AAY29401.1| ribosomal protein S4 [Tortella inclinata]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|24473844|gb|AAL82766.1| small ribosomal subunit protein 4 [Plagiobryum zierii]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K  A + +   L ++ + P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAVISKNLNLYQKYETPNHLTYNFLKKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|99034786|ref|ZP_01314708.1| hypothetical protein Wendoof_01000474 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 200

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 87/202 (43%), Positives = 125/202 (61%), Gaps = 2/202 (0%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   + K++I RR+G NLWGR K PVN R Y PG HG     K S FG Q  A +K K 
Sbjct: 1   MTTVITRKYRISRRLGVNLWGRAKDPVNKRKYPPGQHGILGFKKLSDFGKQFAAHKKFKF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY  IS K+ R  F +A   +G T+ N I  LESRL +++Y +  VPTI++A+Q ++H+H
Sbjct: 61  YYA-ISSKQLRRTFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VN + VNI SYR K GD+I++++++ ++  V+EA Q  ER  P+Y+  +       ++
Sbjct: 120 VTVNDKVVNISSYRVKPGDIIKIRERAAKIPVVVEAEQKQERKAPDYLEADSKEHSVKYL 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVE 202
           R P    +VPY   M+ NLVVE
Sbjct: 180 RSPQ-YSEVPYSADMEVNLVVE 200


>gi|67036030|gb|AAY62941.1| small ribosomal protein subunit 4 [Schwetschkea grateloupii]
          Length = 199

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D + +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|313895093|ref|ZP_07828650.1| ribosomal protein S4 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529822|ref|ZP_08030899.1| ribosomal protein S4 [Selenomonas artemidis F0399]
 gi|312975988|gb|EFR41446.1| ribosomal protein S4 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320137840|gb|EFW29745.1| ribosomal protein S4 [Selenomonas artemidis F0399]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G       +S  +TR        +R   K S +GLQL+ KQK K 
Sbjct: 1   MAIDRVPVLKRCRALGLEPATLGRSRQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  +++A +  G T  NL+S LE R+D +V+R     T   ARQ V H H
Sbjct: 55  IYGVL-ERQFRGYYEKAKKMSGVTGENLLSLLERRIDNVVFRLGLANTRRQARQLVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I S    EGDVIEV +KS+  A   E  + +     P +++ +  N+  T 
Sbjct: 114 FTVNGKRVDIPSALVHEGDVIEVAEKSRASAFFKELKESSNALSAPAWLTADQANLTGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +     V +    +VE YS+
Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197


>gi|188012809|gb|ACD45543.1| ribosomal protein S4 [Riella sp. SC s.n.]
          Length = 195

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINDNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK  D+I +K + K  + + +     ++  +P +++ +         +I    
Sbjct: 117 VDIPSYNCKPKDIITIKDRQKSQSIITKNVNSFQKPKIPNHLTFDLIQFKGLVNQIIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIYLKINELLVVEYYSR 193


>gi|28476386|gb|AAO44475.1| 30S ribosomal protein S4 [Tropheryma whipplei str. Twist]
          Length = 261

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           S+ ++ R +G  L  +    +  R Y PG HG+ R+   S + ++LR KQ+++  YG + 
Sbjct: 61  SRTRLSRALGVPLTPKAARLMEVRPYPPGQHGRFRRKGDSDYAVRLREKQRLRGQYG-LR 119

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+  S++ EA R +G    NL+  LE RLD +V RA F  +I  ARQ V HRH+LV+G+
Sbjct: 120 EKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVVHRHILVDGK 179

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATFVRI 182
            V+  SY    G  ++VK KS  L     A+     DV    P YI  + + +    VR 
Sbjct: 180 LVDRPSYSVSPGQTVKVKPKSVPLDPFQVAASGGHADVLPPIPGYIEADLEGLSFRLVRR 239

Query: 183 PSSLKDVPYPVIMQPNLVVEFY 204
           P   +    PV     LVVE+Y
Sbjct: 240 PKRSE---VPVTCNVQLVVEYY 258


>gi|330468292|ref|YP_004406035.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032]
 gi|328811263|gb|AEB45435.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032]
          Length = 202

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K ++ R +G  L  +    V  R Y PG+HG+ R+    Y  ++L  KQ+++  Y ++S
Sbjct: 6   PKARLSRALGIPLTRKCVRYVERRPYPPGVHGRSRRKTSDYQ-VRLLEKQRLRHQY-NVS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R  F EA R  G T  +L++ LE RLD +V RA    +I+ ARQ V H H  V+GR
Sbjct: 64  EAQLRRTFDEAARRTGKTGESLVTLLEQRLDAVVLRAGMARSIYQARQLVGHGHFTVDGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP--EYISVNHDNMVATFVRIPS 184
            V+  SYR + G V+ V+Q+S+ L     A+  A  +     Y+SV+   + AT +R P+
Sbjct: 124 KVDRPSYRLRPGQVVAVRQRSQALPPFQLAAAGAHAEEQPRPYLSVDLSGLRATLLREPA 183

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV+    LVVE+YSR
Sbjct: 184 RRE---VPVVCDEQLVVEYYSR 202


>gi|49182734|gb|AAT57829.1| small ribosomal protein [Jungermannia exsertifolia]
          Length = 195

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTLKPKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +     +    +
Sbjct: 117 VDIPSYSCQLGDIITVKNKQKSQSMITKNINLFQKLKIPSHLTFDSIELRGYVNQ---RI 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 NREWINLKINELLVVEYYSR 193


>gi|42556438|gb|AAS19814.1| small ribosomal protein 4 [Leiomitra lanata]
          Length = 191

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNEIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDTITIRNKHKSQSIITKNINLFQKLKIPSHLTFDLIQLKGSVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|21914152|gb|AAM81298.1| ribosomal protein subunit 4 [Bryum arachnoideum]
 gi|21914160|gb|AAM81302.1| ribosomal protein subunit 4 [Bryum cyathiphyllum]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKAPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|166031631|ref|ZP_02234460.1| hypothetical protein DORFOR_01331 [Dorea formicigenerans ATCC
           27755]
 gi|166028608|gb|EDR47365.1| hypothetical protein DORFOR_01331 [Dorea formicigenerans ATCC
           27755]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGMDPVYLGIDKKSNRQL------KRSNRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ F++A R  G T  NL+  LESRLD +V+R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYFEKAQRMNGMTGDNLMILLESRLDNVVFRMGFARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GD +E+K+  K      E  +    R VP+++ V+ +N+  T 
Sbjct: 114 VLVNGKQVNIPSYLIKAGDTVEIKEAKKSSPRYKEIVEVTGGRMVPDWLEVDQENLKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPAR---EAIDVPVDEMLIVELYSK 197


>gi|47606900|gb|AAT36370.1| ribosomal protein subunit 4 [Glyphothecium sciuroides]
          Length = 199

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K +      + +     ++  +P +++ +         +I
Sbjct: 117 NDCIVNIPSYRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|67035879|gb|AAY62866.1| small ribosomal protein subunit 4 [Clastobryopsis planula]
          Length = 199

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I  R+G       K+  +       ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIICRLGTLPGLTNKTSQSKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K    + +  +  ++  +P Y++ +         +I
Sbjct: 117 NDCIVNIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNYLTYSSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 VDR---ELIGLKINELLVVEYYSR 197


>gi|67036060|gb|AAY62956.1| small ribosomal protein subunit 4 [Struckia argentata]
          Length = 198

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + +  A + +  +  ++  +P +++ N         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFISMKNQRESEAIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|67036032|gb|AAY62942.1| small ribosomal protein subunit 4 [Aerolindigia capillacea]
          Length = 199

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D + +K + K    + +  +  ++  +P +++ +         +I
Sbjct: 117 NDGIVDIPSYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|257463990|ref|ZP_05628375.1| 30S ribosomal protein S4 [Fusobacterium sp. D12]
 gi|317061512|ref|ZP_07925997.1| SSU ribosomal protein S4P [Fusobacterium sp. D12]
 gi|313687188|gb|EFS24023.1| SSU ribosomal protein S4P [Fusobacterium sp. D12]
          Length = 195

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 105/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + RS  P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRNLGIDPVILGVNKSSNRSLRP-----NANRKPTEYAIQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR ++ EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKLYDEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNGR VNI SYR K GDVI V + SK L  +  A   A  + P ++ ++        +
Sbjct: 115 VTVNGRRVNIASYRVKVGDVIAVVENSKNLDIIKSAVDTA--NAPAWLQLDKAAFAGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|153831469|ref|ZP_01984136.1| ribosomal protein S4 [Vibrio cholerae 623-39]
 gi|148873050|gb|EDL71185.1| ribosomal protein S4 [Vibrio cholerae 623-39]
          Length = 166

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/171 (40%), Positives = 105/171 (61%), Gaps = 6/171 (3%)

Query: 37  HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96
           HG RR     Y G+QLR KQK+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RL
Sbjct: 1   HGARRGRLSEY-GVQLREKQKVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRL 58

Query: 97  DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156
           D +VYR  F  T   ARQ V+H+ +LVNG+ VN+ S+     DV+ V++K+K+ + +  A
Sbjct: 59  DNVVYRMGFGATRAEARQLVSHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAA 118

Query: 157 SQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++AE R+ P +I V+ + M  TF R+P           +   L+VE YS+
Sbjct: 119 LEVAEQREKPTWIEVDVNTMEGTFKRMPERSD---LSADINEQLIVELYSK 166


>gi|21914182|gb|AAM81313.1| ribosomal protein subunit 4 [Bryum caucasicum]
          Length = 198

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKNKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|292669832|ref|ZP_06603258.1| 30S ribosomal protein S4 [Selenomonas noxia ATCC 43541]
 gi|292648629|gb|EFF66601.1| 30S ribosomal protein S4 [Selenomonas noxia ATCC 43541]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G       ++  +TR        +R   K S +GLQL+ KQK K 
Sbjct: 1   MAIDRVPVLKRCRALGIEPATLGRARQSTRQL------RRTNRKVSEYGLQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR  +++A +  G T  NL+S LE RLD +V+R     T   ARQ V H H
Sbjct: 55  VYGVL-ERQFRGYYEKAKKMSGVTGENLLSLLERRLDNVVFRLGLANTRRQARQLVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
             VNG+ V+I S   +EGDVIEV +KS+  A   E  + +     P +++ +  N+  T 
Sbjct: 114 FTVNGKRVDIPSALVREGDVIEVAEKSRASAFFKELKESSNALSAPAWLTADQANLTGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +     V +    +VE YS+
Sbjct: 174 TRFPHREE---IDVPVNEQAIVELYSK 197


>gi|12642232|gb|AAK00198.1| rps4 [Physcomitrium lorentzii]
          Length = 188

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/194 (34%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S       Q    K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 55

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V+I SY
Sbjct: 56  VRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSY 115

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I VK + K  A + +    +++  VP +++ +         +I   L      
Sbjct: 116 RCKPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRESIG 172

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 173 LKINELLVVEYYSR 186


>gi|66866203|gb|AAY57775.1| small ribosomal protein 4 [Aulacomnium androgynum]
          Length = 206

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    +       K S + ++L   QK++ +YG
Sbjct: 3   YRGPRVRIIRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEENQKLRFHYG 59

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 60  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 118

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMVA 177
           N   V+I SYRCK  D I +K + K  A +      +     ++  +P +++ +      
Sbjct: 119 NDHIVDIPSYRCKPQDFITIKDRQKSEAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKKG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I   L      + +   LVVE+YSR
Sbjct: 179 LVNQI---LDRESIGLKINELLVVEYYSR 204


>gi|62287266|sp|Q6H9L0|RR4_EQULA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927203|emb|CAE47537.1| small ribosomal protein 4 [Equisetum laevigatum]
 gi|48927205|emb|CAE47538.1| small ribosomal protein 4 [Equisetum myriochaetum]
          Length = 207

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+ +NL G     V ++        Q  + K S +G++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRIIRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARGAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V++ S+ CK  D+I +       + + +  +  A+  +PE++++         
Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|21914164|gb|AAM81304.1| ribosomal protein subunit 4 [Plagiobryum lisae]
 gi|21914168|gb|AAM81306.1| ribosomal protein subunit 4 [Bryum pachytheca]
 gi|25986603|gb|AAL92524.1| small ribosomal subunit protein 4 [Bryum ruderale]
 gi|25986605|gb|AAL92525.1| small ribosomal subunit protein 4 [Bryum radiculosum]
 gi|27227937|gb|AAN85766.1| ribosomal protein subunit 4 [Bryum kikuyuense]
 gi|27227941|gb|AAN85768.1| ribosomal protein subunit 4 [Bryum clavatum]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|67035883|gb|AAY62868.1| small ribosomal protein subunit 4 [Taxithelium planum]
          Length = 199

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I  R+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIYRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAATIPEARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K K K    + +  + +++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKNKRKSETIINKNIEFSQKYKIPNHLTYNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 VDR---ELIGLKINELLVVEYYSR 197


>gi|17025806|gb|AAL32070.1| ribosomal protein 4 [Syrrhopodon loreus]
          Length = 198

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K      +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLSGLTNKISQLKSNS---INQSTPNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SY+CK  D I +K + K    +++  + + +  +P +++ N         +I 
Sbjct: 117 NNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNIKFSPKHKIPNHLTFNSVEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|49182746|gb|AAT57835.1| small ribosomal protein [Lepidozia reptans]
          Length = 196

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGAPPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|255283706|ref|ZP_05348261.1| ribosomal protein S4 [Bryantella formatexigens DSM 14469]
 gi|255265771|gb|EET58976.1| ribosomal protein S4 [Bryantella formatexigens DSM 14469]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R +G +         + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVDRTPVLKRCRSLGLDPVYLGIDKKSNREL------KRANRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +K+A+R  G T  NL++ LESRLD +++R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYKKAERMPGMTGANLMTMLESRLDNVIFRLGFARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GD +E+K+K K      E  +    R VP+++ V+ +N+ AT 
Sbjct: 114 VLVNGKQVNIPSYLVKAGDTVEIKEKCKGFQRYKEILEATNGRLVPDWLDVDTENLKATV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPAR---EAIDVPVNEMLIVELYSK 197


>gi|227345127|gb|ACP28116.1| small ribosomal protein 4 [Chiloscyphus semiteres]
          Length = 191

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI AARQ VNH H+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPAARQLVNHGHISINNYIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|6002031|emb|CAA58923.1| ribosomal protein S4 [Bambusa oldhamii]
          Length = 196

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTP----KPGSNLKNKSHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ +NHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLLNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN R V+I S+ CK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNRRIVDIPSFCCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196


>gi|11228613|gb|AAG33092.1| small ribosomal protein 4 [Arctoa falcata]
          Length = 190

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K   K  A +++    +++  VP +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNCQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|63191835|gb|AAY34877.1| small ribosomal protein subunit 4 [Streptopogon calymperes]
          Length = 199

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +  + K    + +    +++  +P ++  N         +I
Sbjct: 117 NDRIVNIPSYRCKPQDFITISDRKKSQVIITKNVDSSQKSKIPNHLIFNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LNQESIGLKINELLVVEYYSR 197


>gi|18920791|gb|AAL82440.1| ribosomal protein system 4 [Struckia argentata var. zerovii]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITMKNQRKSEAIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|291460744|ref|ZP_06600134.1| ribosomal protein S4 [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291416703|gb|EFE90422.1| ribosomal protein S4 [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 212

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +    K  R +G +         +TR     L  QRRK     +GLQLR KQK K 
Sbjct: 16  MAVDKVPVLKRCRSLGLDPVFLGVDKKSTRQ----LRNQRRKMSE--YGLQLREKQKAKF 69

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A+R  G T  NL+  LESRLD++++R     T   ARQ V HRH
Sbjct: 70  IYGVL-EKPFRNYYAKAERMSGQTGENLMILLESRLDSVIFRMGLARTRREARQVVGHRH 128

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           V VNG+ VNI SY    GDVI +K+  K      +  +  A R VP ++ V+ + + AT 
Sbjct: 129 VTVNGKLVNIPSYLVSAGDVIAIKESMKSAQRYKDILEVTAGRMVPAWLEVDQEKLSATV 188

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P   +     V +   L+VE YS+
Sbjct: 189 KQLPHREE---IDVPVNEMLIVELYSK 212


>gi|67036010|gb|AAY62931.1| small ribosomal protein subunit 4 [Entodontopsis leucostega]
          Length = 197

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD  ++R    PTI  ARQ +NHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNXIFRLGMAPTIPGARQLINHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|307828400|gb|ADN94998.1| small ribosomal protein 4 [Fossombronia wattsii]
          Length = 197

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       +       Y   L   ++ S+   + ++L  KQK++ +YG +
Sbjct: 1   GPRAKMIRRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+ 
Sbjct: 57  TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDD 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +VNI SY CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  ++  
Sbjct: 117 DTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQMID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 RD---WINLKINELLVVEYYSR 195


>gi|118626051|emb|CAL39334.1| small ribosomal protein 4 [Herbertus aduncus]
          Length = 191

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKTKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLYGSINQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|49182797|gb|AAT57860.1| small ribosomal protein [Schistochila lehmanniana]
          Length = 195

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIIRRLGILPGLTSKTPKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +
Sbjct: 117 VDIPSYNCELGDIIAIKNKQKSQSMITRNLNLLQKPKIPNHLTFDPTQLRGLVNQ---RV 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 HRESINLKINELLVVEYYSR 193


>gi|63191777|gb|AAY34848.1| small ribosomal protein subunit 4 [Psilopilum cavifolium]
          Length = 195

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPXLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R 
Sbjct: 57  RQLLNYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42556432|gb|AAS19811.1| small ribosomal protein 4 [Isotachis humectata]
          Length = 191

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTPKQKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ +N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISINNETVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++   K  + +        + ++P +++ +   +  +  ++        
Sbjct: 117 SYNCEPGDIITIRNGEKSQSIITRNINSFHKSEIPNHLTFDSTKLRGSINKMIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKVNELLVVEYYSR 189


>gi|63191803|gb|AAY34861.1| small ribosomal protein subunit 4 [Erythrophyllopsis fuscula]
          Length = 199

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|294790790|ref|ZP_06755948.1| ribosomal protein S4 [Scardovia inopinata F0304]
 gi|294458687|gb|EFG27040.1| ribosomal protein S4 [Scardovia inopinata F0304]
          Length = 208

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K + ++   ++ R +G  L  + +     R YGPG HG+ R+   S + ++LR KQ++
Sbjct: 1   MTKIQRARRQVRLSRSLGIALTPKAQRLFEKRPYGPGEHGRDRRRAESDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG ISEK+ R++++ A R+ G T  ++   LE+RLD +V R+ F  T   ARQFV H
Sbjct: 61  RAQYG-ISEKQLRAVYERATRAAGQTGTSMQVQLETRLDALVLRSGFARTTAQARQFVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174
           RH+LV+G  V+  SYR K G  I+VK KS+ +     A++   RD    VP Y+ V   +
Sbjct: 120 RHILVDGNIVDRPSYRVKPGQTIQVKPKSQTMEPFQAAAEGVHRDVLPQVPGYLDVTLPS 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + AT  R+P   +    PV +    VVE+Y+R
Sbjct: 180 LKATLTRLPEVEE---IPVQVNIQYVVEYYAR 208


>gi|293634029|gb|ADE60394.1| ribosomal protein subunit 4 [Pogonatum campylocarpon]
 gi|293634043|gb|ADE60401.1| ribosomal protein subunit 4 [Pogonatum microstomum]
          Length = 195

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|83416508|gb|ABC18274.1| small ribosomal subunit protein 4 [Breutelia chrysocoma]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|237739946|ref|ZP_04570427.1| SSU ribosomal protein S4P [Fusobacterium sp. 2_1_31]
 gi|294782962|ref|ZP_06748288.1| ribosomal protein S4 [Fusobacterium sp. 1_1_41FAA]
 gi|229421963|gb|EEO37010.1| SSU ribosomal protein S4P [Fusobacterium sp. 2_1_31]
 gi|294481603|gb|EFG29378.1| ribosomal protein S4 [Fusobacterium sp. 1_1_41FAA]
          Length = 195

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +         + R   P         KP+ + +QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYAIQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI S+R K GDV+ V + SK +  +  A + A    P ++ ++        +
Sbjct: 115 IAVNGRRVNIASFRVKVGDVVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|63078573|gb|AAY29373.1| ribosomal protein S4 [Eucladium verticillatum]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKTPHLKFSST---NQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVSIPSYRCKPQDFISIKDRQKSQIMITKNVDFSQKSKIPNHLTFNSIEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|154508868|ref|ZP_02044510.1| hypothetical protein ACTODO_01379 [Actinomyces odontolyticus ATCC
           17982]
 gi|293192678|ref|ZP_06609632.1| ribosomal protein S4 [Actinomyces odontolyticus F0309]
 gi|153798502|gb|EDN80922.1| hypothetical protein ACTODO_01379 [Actinomyces odontolyticus ATCC
           17982]
 gi|292820185|gb|EFF79182.1| ribosomal protein S4 [Actinomyces odontolyticus F0309]
          Length = 207

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 118/211 (55%), Gaps = 9/211 (4%)

Query: 1   MSKRESSK-HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M+   S K  +  R +G  L  +       R YGPG HG+ R+ + S + ++L+ KQ+++
Sbjct: 1   MATNRSRKQVRESRALGLALTPKAVRYFEKRPYGPGEHGRTRRRQDSDYAVRLKEKQRLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E + R  F+EA R+ G T  NL+  LE RLD++V RA F  TI  ARQFV HR
Sbjct: 61  AQYG-IRESQLRRAFEEARRTAGLTGENLVELLEMRLDSLVLRAGFARTIQQARQFVVHR 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNM 175
           H+LV+G+ V+  S+R K G  ++VK KS+       A++   RD    VPEY+ V    +
Sbjct: 120 HILVDGKIVDRPSFRVKPGQTLQVKPKSQTTVPFEIAAEGIHRDVLPAVPEYLDVELSRL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            AT VR P   +    PV +   +VVE YSR
Sbjct: 180 KATLVRRPKRAE---VPVTVDVQMVVEHYSR 207


>gi|63101037|gb|AAY33143.1| small ribosomal protein 4 [Cyptodon muelleri]
          Length = 198

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K      S+   ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGILPGLTNKISQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|157689432|gb|ABV65272.1| ribosomal protein S4 [Bursera simaruba]
          Length = 194

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+        K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLEALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  +   K  A +      +   ++P+++++          +I  S 
Sbjct: 116 VDIPSYRCKPRDIITARDDQKSRALIQNYLDSSHHEELPKHLTLQAFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|67035694|gb|AAY62778.1| small ribosomal protein subunit 4 [Ptychomitriopsis aloinoides]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
               +I RR+G       K+ + + S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPXVRIIRRLGALPGLTNKTQLKSSS----INQSTSNKKISQYRIRLEEKQKLRFHYG-I 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN 
Sbjct: 56  TERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNN 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K  A V++    +++  VP +++ N         +I  
Sbjct: 116 RIVNIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI-- 173

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 174 -LDHKSIGLKINELLVVEYYSR 194


>gi|78369639|gb|ABB43049.1| ribosomal protein 4 [Calymperes dozyanum]
          Length = 199

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A +++G T   L+ FLE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKTKGSTGQILLQFLEMRLDNIIFRLGIAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY+CK  D I +K + K    +++ +  + +  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTNFSPKYKIPSHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|291320521|ref|YP_003515785.1| 30S ribosomal protein S4 [Mycoplasma agalactiae]
 gi|290752856|emb|CBH40831.1| 30S ribosomal protein S4 [Mycoplasma agalactiae]
          Length = 198

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 11/206 (5%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           +      K  RR G ++    K  S    R+Y PG HG +R  K S +GL L  KQK++ 
Sbjct: 2   RYLGPVFKKARRYGISILENEKEFSKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKVRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+ + I+  A + +G    NL+  LESR D +VYRA F  T   ARQ V H H
Sbjct: 61  IYG-ISEKQLQKIYARAIKMKGVAGTNLLQLLESRFDNVVYRAGFATTRRQARQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             +NG++ +I S     GDVI +K K++    V  A +   +    +++V   N  A   
Sbjct: 120 FQLNGKNADIPSMHISVGDVITLKAKTQNNNQVKAALES--KPAAAWLTV--KNFEAKVD 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       ++ N V+E YS+
Sbjct: 176 RLPDRSE---LNPNVKENFVIEHYSK 198


>gi|37548847|gb|AAO32692.1| ribosomal protein 4 [Oligotrichum austroaligerum]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
               KI RR+G       K+      Y   ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GP-CKIIRRLGALPGLTNKTLQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-I 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN 
Sbjct: 56  TERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVND 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + +  A +      +++  +P +++ N         +I  
Sbjct: 116 RIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI-- 173

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 174 -LDRESIGLKINELLVVEYYSR 194


>gi|12642244|gb|AAK00204.1| rps4 [Lorentziella imbricata]
          Length = 194

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  VP +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITMKDRQKSQAMITKNIDFFQKSKVPNHLTFNSLQKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|283549376|dbj|BAI66350.1| small ribosomal protein 4 [Mizutania riccardioides]
          Length = 194

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+G  L G  K  + ++S         +K   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKVIRRLGA-LPGSTKKILESKSSSIDRSTSSKK--VSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A + +G T    +  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRLARKFKGSTGQVSLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+  VK   +  + +L+   L  + +VP +++ +   +  + 
Sbjct: 117 ISINEDIVDIPSYNCEPGDITTVKGTERSQSIILKNINLFPKSEVPSHLTFDPIKLWGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLV 200
            ++ +        + +   LV
Sbjct: 177 NQMINR---EWIDLKINELLV 194


>gi|12642246|gb|AAK00205.1| rps4 [Lorentziella imbricata]
          Length = 195

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V
Sbjct: 58  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVNDCIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  VP +++ N         +I   L 
Sbjct: 118 DIPSYRCKPQDFITMKDRQKSQAMITKNIDFFQKSKVPNHLTFNSLQKKGLVNQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIGLKINELLVVEYYSR 193


>gi|67035781|gb|AAY62821.1| small ribosomal protein subunit 4 [Cryphaea patens]
          Length = 198

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +          I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNXI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|222103422|gb|ACM44240.1| small ribosomal protein subunit 4 [Brothera leana]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+     +    +       K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNY 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    V +  + +++  VP +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LNKESIGLKINELLVVEYYSR 194


>gi|21914146|gb|AAM81295.1| ribosomal protein subunit 4 [Anomobryum conicum]
          Length = 198

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I 
Sbjct: 117 NRIVNIPSYRCKPEDSITIKDRPKSQAIISKNLNLYQKYKTPNHLTYNFLKKNGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|63191815|gb|AAY34867.1| small ribosomal protein subunit 4 [Pseudocrossidium aureum]
          Length = 199

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNPSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITINDRKKSQIMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|37992681|gb|AAR06519.1| small ribosomal protein 4 [Squamidium leucotrichum]
          Length = 199

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D + +K + K    + +  +  ++  +P +++           +I
Sbjct: 117 NECIVDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|46486552|gb|AAS98712.1| ribosomal protein subunit 4 [Braithwaitea sulcata]
          Length = 199

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGILPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  II-ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I
Sbjct: 117 NDRIVDIPSYRCKPQDFITIKNRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|299144486|ref|ZP_07037565.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517574|gb|EFI41314.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 198

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 106/206 (51%), Gaps = 10/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K  RR+G N+ G PK+              R   K + +G QL  KQ+++ 
Sbjct: 1   MAKMMVPRFKQSRRLGLNVCGHPKAMKRATKGT-----ARSDKKLTEYGKQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F ++FKEA +S+  T   L+ FLE RLD + YR  F  +I  ARQ V H H
Sbjct: 56  YYGVL-EKQFVNLFKEAKKSKEQTGPALVQFLERRLDNLAYRMGFASSIRQARQMVTHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ VNI SYRC  GDVI +  + ++        +        YI    D   AT V
Sbjct: 115 ITVNGKKVNIPSYRCSAGDVIALSARGRKAELFKTNYETNYVTSYPYIKKEED-FKATLV 173

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+       PV +   L+VEFYS+
Sbjct: 174 SLPNR---EDIPVEIDDQLIVEFYSK 196


>gi|29422383|gb|AAO84587.1| small ribosomal protein 4 [Plagiopus oederianus]
          Length = 199

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRXHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I
Sbjct: 117 NDRMVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      +     LVVE+YSR
Sbjct: 177 ---LDRESIGLKTNELLVVEYYSR 197


>gi|50954758|ref|YP_062046.1| 30S ribosomal protein S4 [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|61215514|sp|Q6AFA4|RS4_LEIXX RecName: Full=30S ribosomal protein S4
 gi|50951240|gb|AAT88941.1| 30S ribosomal protein S4 [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 207

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 82/208 (39%), Positives = 114/208 (54%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS R  SK +  R +G  L  +    +  R Y PG HG+ ++   S + ++LR KQ+++ 
Sbjct: 1   MSSRSRSKTRESRALGIALTPKAARYMEKRPYAPGEHGRTKRKADSDYAVRLREKQRLRA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+ R  F+EA R++G T  NL+  LE RLD +V RA F  TI  ARQFV HRH
Sbjct: 61  QYG-ILEKQLRIAFEEARRTQGLTGENLVEILEMRLDALVLRAGFARTISQARQFVVHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMV 176
           +LV+G+ V+  S+R K G  I VK +S+       A+     DV    P Y+SV  D + 
Sbjct: 120 ILVDGKLVDRPSFRVKPGQTIGVKARSEGTEPFQVAAAGGHVDVLPKTPAYLSVELDKLQ 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           A   R P   +    PV  +  LVVE+Y
Sbjct: 180 ARLERRPKRAE---VPVTCEVQLVVEYY 204


>gi|18920775|gb|AAL82432.1| ribosomal protein system 4 [Plagiothecium nemorale]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N+        +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|85001771|gb|ABC68423.1| small ribosomal protein 4 [Goniomitrium seroi]
 gi|85001773|gb|ABC68424.1| small ribosomal protein 4 [Goniomitrium seroi]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGVLPGLSNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A R++G T   L+  LE RLD +V+R    PTI  ARQ VNHRHVLVN  
Sbjct: 57  ERQLLNYVRIARRAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHVLVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +    +++  VP +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNRQKSQAIITKNINFSQKYKVPNHLTFDSVQKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|118626027|emb|CAL41741.1| small ribosomal protein 4 [Anastrophyllum minutum var. weberi]
          Length = 191

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIS 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|46486568|gb|AAS98720.1| ribosomal protein subunit 4 [Racopilum cuspidigerum]
          Length = 200

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K + K  A   +     ++  +P +++ +         +
Sbjct: 117 VNDRIVDIPSYRCKPQDFITIKDRQKSQAITSKNIDFYQKYKIPNHLTYSSLEKKRFVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198


>gi|11878072|gb|AAG40784.1| small ribosomal protein 4 [Sphagnum cuspidatum]
 gi|20531047|gb|AAM27348.1| ribosomal protein 4 [Sphagnum cuspidatum]
          Length = 192

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   ILRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI
Sbjct: 57  LKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A +  +   +     P +++++      +  +I       
Sbjct: 117 PSYRCKPQDFITIKDRQKSQAIITRSMDDSRGYKTPNHLTLDSSQKKGSVNQIIDR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|39546761|gb|AAR28107.1| small ribosomal protein 4 [Polytrichadelphus purpureus]
          Length = 195

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 7/199 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P     Y        +K   S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSGYINQQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   V
Sbjct: 58  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A ++     +++  +P +++ N         +I   L 
Sbjct: 118 NIPSYRCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIGLKINELLVVEYYSR 193


>gi|63191775|gb|AAY34847.1| small ribosomal protein subunit 4 [Oligotrichum parallelum]
          Length = 194

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P     Y     G  +K   S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSGYI-NQAGSNKK--ISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 57  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDQQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|46811002|gb|AAT01819.1| small ribosomal protein 4 [Fossombronia angulosa]
          Length = 197

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G       +       Y   L   ++ S+   + ++L  KQK++ +YG +
Sbjct: 1   GPRAKMIRRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+ 
Sbjct: 57  TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDD 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +VNI SY CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  +   
Sbjct: 117 DTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLLQKPKTPNHLTLDSTRLRGSINQTID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 RD---WINLKINELLVVEYYSR 195


>gi|23504383|emb|CAC81062.1| small ribosomal protein 4 [Dendrocyathophorum decolyi]
          Length = 198

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NH+H+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHKHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +L ++  +P ++  N         +I 
Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQRKSEAIINKNIELYQKYKIPNHLIYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|548864|sp|P36454|RR4_DENGI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439934|emb|CAA82434.1| ribosomal protein S4 [Dendrocalamus giganteus]
 gi|6002057|emb|CAA58935.1| ribosomal protein S4 [Gigantochloa verticillata]
          Length = 196

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVN R V+I S+RCK  D+I  K   +    V  +   ++   +P++++++        
Sbjct: 116 ILVNRRIVDIPSFRCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   LVVE+
Sbjct: 176 KKILDRK---WVGLKINELLVVEY 196


>gi|116010533|emb|CAL38870.1| ribosomal protein S4 [Saxifraga rotundifolia]
          Length = 194

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR G       K P      G  L  Q R  K + + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRTGALPGLTSKRP----RPGSDLRNQPRSGKRTQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  DVI  K + K    +  +   +   +VP+Y++++         +I  + 
Sbjct: 116 VDIPSYRCKPRDVITAKDEQKSKTLIQNSLDSSPHEEVPKYLTLHPFQYKGVVNQIIDNK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|46811006|gb|AAT01821.1| small ribosomal protein 4 [Fossombronia sp. Stotler &
           Crandall-Stotler 3940]
          Length = 197

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K+ RR+G  L G     +  RS         +K     + ++L  KQK++ +YG +
Sbjct: 1   GPRAKMIRRLGV-LPGLTDRIIEPRSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+ 
Sbjct: 57  TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDD 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
            +VNI SY CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  +   
Sbjct: 117 DTVNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDLTRLRGSINQTID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 RD---WIDLKINELLVVEYYSR 195


>gi|42556508|gb|AAS19849.1| small ribosomal protein 4 [Triandrophyllum subtrifidum]
          Length = 191

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGVLPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHIAINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLRGSINQAINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|78369635|gb|ABB43047.1| ribosomal protein 4 [Calymperes lonchophyllum]
          Length = 198

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A +++G T   L+  LE RLD I++R   VPTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIVPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SY+CK  D I +K   K    +++    + +  +P +++ N         +I 
Sbjct: 117 NCIVNIPSYQCKPEDCITIKDPQKYQTMIVKNINFSPKYKIPSHLTFNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|116513812|ref|YP_812718.1| ribosomal protein S4 [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093127|gb|ABJ58280.1| SSU ribosomal protein S4P [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 185

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 6/185 (3%)

Query: 23  PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82
               +  RSY PG HG   + + S +G+QL+ KQK++  +G ++E++FR++F  A + R 
Sbjct: 4   TGKELARRSYIPGQHGPNHRGRLSEYGMQLQEKQKLRWMFG-LNERQFRTLFARAGKIRE 62

Query: 83  -DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
                N +  LE RLD +VYR     T   ARQ VNH H+ V+G+ V+I SY  K G  I
Sbjct: 63  GQHGTNFMILLERRLDNVVYRLGLATTREQARQLVNHGHITVDGKRVDIPSYEVKVGQTI 122

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201
            +K+KSK L  V +A + A    P ++S + D M    VR P   +  P    +   LVV
Sbjct: 123 SLKEKSKNLQQVKDALE-AVASRPSFVSFDEDKMEGQLVRFPERDEMEP---EIDEALVV 178

Query: 202 EFYSR 206
           E+Y++
Sbjct: 179 EYYNK 183


>gi|67035937|gb|AAY62895.1| small ribosomal protein subunit 4 [Alsia californica]
          Length = 198

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +L ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|302336354|ref|YP_003801561.1| SSU ribosomal protein S4P [Olsenella uli DSM 7084]
 gi|301320194|gb|ADK68681.1| SSU ribosomal protein S4P [Olsenella uli DSM 7084]
          Length = 197

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R++  +        V   +       +RR+ + S +G+QLR KQK K 
Sbjct: 1   MAIDRTPVLKRCRQLDIDP------IVMGINKKSKREIRRRRRQESEYGIQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +++A +  G    NL+S LE+RLD +V+R  F  T   ARQ V H H
Sbjct: 55  IYGVL-EKQFRGYYEKAMKRDGIAGDNLMSILETRLDNVVFRLGFARTRKEARQTVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + VNGR V+I SY+ K GDV+ V  K+K L  + EA   +E   VP ++ V+ + +  T 
Sbjct: 114 ITVNGRRVDIPSYQVKAGDVVAVAPKAKDLLPIKEALISSEHMAVPAWLEVDIEKLQGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ P   +     + +   L+VE YS+
Sbjct: 174 LQTPVRDQ---IDLDIDAQLIVELYSK 197


>gi|184200995|ref|YP_001855202.1| 30S ribosomal protein S4 [Kocuria rhizophila DC2201]
 gi|183581225|dbj|BAG29696.1| 30S ribosomal protein S4 [Kocuria rhizophila DC2201]
          Length = 212

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +  R +G  L  + +     R Y PG HG+ R+ + S + ++L  KQ+++  Y +I EK
Sbjct: 13  VRKSRALGIALTPKAEKYFERRPYAPGEHGRARRKQDSDYKVRLTEKQRLRAQY-NIREK 71

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +    + EA R  G T  NLI+ LE+RLD +V RA FV T+ AARQ V HRH++V+G+ V
Sbjct: 72  QMHRAYVEAKRVEGQTGENLIALLETRLDALVLRAGFVRTMAAARQAVVHRHIMVDGQRV 131

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATFVRIPS 184
           +  SYR + G +I V  +S+++     A+  A +DV    P Y+ V  D + AT  R P 
Sbjct: 132 DRPSYRVRPGQMIHVHPRSEKMVPFQIAATGANQDVLPDTPPYLDVTIDRLQATLSRKPE 191

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV  +  LVVE+Y+R
Sbjct: 192 RSE---VPVTCEEQLVVEYYAR 210


>gi|21914142|gb|AAM81293.1| ribosomal protein subunit 4 [Acidodontium ramicola]
          Length = 197

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGLAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPS 184
           R +NI SYRCK  D I +K + K    + +   L  +   P +++ +         +I  
Sbjct: 117 RIINIPSYRCKPEDSITIKDRQKSQTIISKNLNLYPKYKTPNHLTYDLKEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|47606882|gb|AAT36361.1| ribosomal protein subunit 4 [Ancistrodes genuflexa]
          Length = 199

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRLRIIRRLGFLPGLSNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +   E+R D I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVSLQLPETRSDNIIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I
Sbjct: 117 NDCIVDIPSYRCKPQDFITIKDQRKSEAIIGKNIEFYQKYKIPNHLTYNLLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197


>gi|222103528|gb|ACM44293.1| small ribosomal protein subunit 4 [Brachythecium plumosum]
          Length = 203

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG 
Sbjct: 6   RGPRVRIIRRLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 61

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 62  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 121

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 122 DCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI- 180

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 181 --LDRESIGLKINELLVVEYYSR 201


>gi|256832586|ref|YP_003161313.1| 30S ribosomal protein S4 [Jonesia denitrificans DSM 20603]
 gi|256686117|gb|ACV09010.1| ribosomal protein S4 [Jonesia denitrificans DSM 20603]
          Length = 208

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS    S+   ++ R +G  L  +       R Y PG HG+ R+   S + ++LR KQ++
Sbjct: 1   MSSVTRSRRQVRLSRALGLALTPKAVKHFEKRPYAPGEHGRSRRRTESDYAVRLREKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  Y  + EK+ R+ + +A    G T   ++  LE+RLD +V RA F  TI  ARQ V H
Sbjct: 61  RAQYA-LREKQMRAAYDKARHLDGLTGETMVELLETRLDALVLRAGFARTILQARQAVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDN 174
           RH+LV+G+ V+  S+R K G  I+VK K +       A+  A RD    VP Y+ V  + 
Sbjct: 120 RHILVDGKLVDRPSFRVKPGQTIQVKPKMQAATPYQVAAAGAHRDVLPEVPGYLDVQLEK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A   R P+  +    PV  + NLVVE+Y+R
Sbjct: 180 LTAVLTRKPARAE---IPVQCEVNLVVEYYAR 208


>gi|67035642|gb|AAY62752.1| small ribosomal protein subunit 4 [Dichodontium pellucidum]
          Length = 190

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTSKTTKLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++    +++  VP++++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQQKSQAMIMKNLDFSQKYKVPDHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|80974152|gb|ABB53769.1| small ribosomal subunit protein 4 [Garovaglia plicata]
          Length = 199

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T    +  LE RLD I++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  DVI VK +      + +     ++  +P +++           +I
Sbjct: 117 NDCIVNIPSYRCKPQDVIIVKNEKNSEGVINKDEDFHQKYKIPNHLTYIFLEKKGLVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197


>gi|311693294|gb|ADP96167.1| 30S ribosomal protein S4 [marine bacterium HP15]
          Length = 167

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/172 (40%), Positives = 103/172 (59%), Gaps = 6/172 (3%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           +HG RR     Y G+QLR KQK+++ YG + EK+FR+ +KEA R +G T  NL+  LE R
Sbjct: 1   MHGARRGRLSEY-GVQLREKQKVRRIYGVL-EKQFRNYYKEAARGKGATGENLLQLLEGR 58

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +VYR  F  T   ARQ V+H+ +LVN ++VNI SY+ + GDV+ V++K+K    V  
Sbjct: 59  LDNVVYRMGFGSTRAEARQLVSHKAILVNDKTVNIPSYQVRPGDVVSVREKAKNQLRVRG 118

Query: 156 ASQLAERDVP-EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A  L+    P  ++ V+ + M   +  +P   +    P  +  NL+VE YS+
Sbjct: 119 ALDLSASRAPVSWVEVDANKMSGVYKSVPERTE---LPADINENLIVELYSK 167


>gi|296119325|ref|ZP_06837893.1| ribosomal protein S4 [Corynebacterium ammoniagenes DSM 20306]
 gi|295967717|gb|EFG80974.1| ribosomal protein S4 [Corynebacterium ammoniagenes DSM 20306]
          Length = 178

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/182 (36%), Positives = 101/182 (55%), Gaps = 6/182 (3%)

Query: 26  PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
               R Y PG  G+ R  +  Y  LQL+ KQK K  YG + E++FR  + EA+R  G T 
Sbjct: 2   AFERRPYPPGQAGRNRIKESEYL-LQLQEKQKAKYTYGVL-ERQFRRYYVEANRQPGKTG 59

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            NL+  LESRLD +VYRA    T   ARQ V+H H  VNG+  N+ SY+  + D+I++++
Sbjct: 60  DNLVVLLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKTNVPSYQVSQYDIIDIRE 119

Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           +S+++    EA   L E  VP ++ V  + +     ++P   +     V +Q  L+VE Y
Sbjct: 120 RSQKMEWFEEAQDRLGEAVVPAWLQVVPETLRILVHQLPERAQ---IDVPLQEQLIVELY 176

Query: 205 SR 206
           S+
Sbjct: 177 SK 178


>gi|283549378|dbj|BAI66351.1| small ribosomal protein 4 [Mizutania riccardioides]
          Length = 194

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+G +L G  K  + ++S         +K   S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKVIRRLG-DLPGSTKKILESKSSSIDRSTSSKK--VSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A + +G T    +  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVRLARKFKGSTGQVSLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+  VK   +  + +L+   L  + +VP +++ +   +  + 
Sbjct: 117 ISINEDIVDIPSYNCEPGDITTVKGTERSQSIILKNINLFPKSEVPSHLTFDPIKLWGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLV 200
            ++ +        + +   LV
Sbjct: 177 NKMINR---EWIDLKINELLV 194


>gi|92417461|gb|ABE76826.1| ribosomal protein subunit 4 [Cryphaea heteromalla]
          Length = 198

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRELIGLKINELLVVEYYSR 196


>gi|63078648|gb|AAY29410.1| ribosomal protein S4 [Oxystegus tenuirostris]
          Length = 197

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S            K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQELIGLKINELLVVEYYSR 195


>gi|37992643|gb|AAR06500.1| small ribosomal protein 4 [Philophyllum tenuifolium]
          Length = 199

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + +  + + +  +  ++  +P +++ N         +I
Sbjct: 117 NDYIVDIPSYRCKPQDFITIKNQRQSESIISKNIEFYQKIKIPNHLTYNFLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 LDRD---SIGLKINELLVVEYYSR 197


>gi|291548010|emb|CBL21118.1| SSU ribosomal protein S4P [Ruminococcus sp. SR1/5]
          Length = 197

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 113/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         +TR        +R   K S +GLQL+ KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKVSEYGLQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +K+ADR +G T  NL+  LESRLD IV+R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYKKADRMQGQTGENLMVMLESRLDNIVFRMGFARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY CK GD IE+++KSK         ++   R VPE+I V+ +N+    
Sbjct: 114 VLVNGKCVNIPSYLCKAGDTIEIREKSKGSERYKGILEITGGRLVPEWIDVDQENLKGVV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KELPTREQ---IDVPVNEMLIVELYSK 197


>gi|28194781|gb|AAO33652.1|AF481007_1 ribosomal protein S4 [Crossidium seriatum]
 gi|28194783|gb|AAO33653.1|AF481008_1 ribosomal protein S4 [Crossidium seriatum]
 gi|28194791|gb|AAO33657.1|AF481012_1 ribosomal protein S4 [Tortula muralis]
 gi|28194795|gb|AAO33659.1|AF481014_1 ribosomal protein S4 [Tortula israelis]
 gi|28194797|gb|AAO33660.1|AF481015_1 ribosomal protein S4 [Tortula muralis]
 gi|28194801|gb|AAO33662.1|AF481017_1 ribosomal protein S4 [Tortula muralis var. obcordata]
 gi|28194803|gb|AAO33663.1|AF481018_1 ribosomal protein S4 [Tortula muralis]
 gi|28194805|gb|AAO33664.1|AF481019_1 ribosomal protein S4 [Tortula muralis]
 gi|28194807|gb|AAO33665.1|AF481020_1 ribosomal protein S4 [Tortula muralis]
 gi|28194809|gb|AAO33666.1|AF481021_1 ribosomal protein S4 [Tortula muralis]
 gi|28194811|gb|AAO33667.1|AF481022_1 ribosomal protein S4 [Tortula muralis]
 gi|28194813|gb|AAO33668.1|AF481023_1 ribosomal protein S4 [Tortula muralis]
 gi|28194823|gb|AAO33673.1|AF481028_1 ribosomal protein S4 [Tortula muralis]
 gi|28194825|gb|AAO33674.1|AF481029_1 ribosomal protein S4 [Tortula muralis]
 gi|28194843|gb|AAO33683.1|AF481038_1 ribosomal protein S4 [Tortula israelis]
 gi|28194845|gb|AAO33684.1|AF481039_1 ribosomal protein S4 [Tortula muralis]
 gi|28194847|gb|AAO33685.1|AF481040_1 ribosomal protein S4 [Tortula muralis var. aestiva]
 gi|28194849|gb|AAO33686.1|AF481041_1 ribosomal protein S4 [Tortula muralis]
          Length = 196

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|37960577|gb|AAP70658.1| small ribosomal protein 4 [Sphagnum aongstroemii]
          Length = 195

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P +  SY   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTSKIPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|21914174|gb|AAM81309.1| ribosomal protein subunit 4 [Plagiobryum uliginosum]
          Length = 197

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|291456658|ref|ZP_06596048.1| ribosomal protein S4 [Bifidobacterium breve DSM 20213]
 gi|291381935|gb|EFE89453.1| ribosomal protein S4 [Bifidobacterium breve DSM 20213]
          Length = 208

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + +     R Y PG HG+ R+   S + +++R KQ+++  YG ISEK
Sbjct: 11  VRLSRALGIALTPKAQRIFEKRPYAPGEHGRDRRRTESDYAVRMREKQRLRAQYG-ISEK 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R+ +++A R+ G T + +++ LE+RLD +V RA    T   ARQFV HRH+LV+G  V
Sbjct: 70  QLRAAYEKATRTAGQTGNAMLTDLETRLDNLVLRAGIARTTAQARQFVVHRHILVDGNVV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SYR K G  I+VK KS+ +     A++   RD    VP Y+ VN  ++ AT  R P 
Sbjct: 130 DRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGVHRDVLPAVPGYLDVNLASLKATLTRKPE 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV +    VVEFY+R
Sbjct: 190 VEE---IPVQVNIQYVVEFYAR 208


>gi|42556400|gb|AAS19795.1| small ribosomal protein 4 [Blepharostoma trichophyllum]
          Length = 191

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINTDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITVRNKQKSQSLITKNINLFQKLKIPSHLTFDSTKLQGSINQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLNINELLVVEYYSR 189


>gi|29422371|gb|AAO84581.1| small ribosomal protein 4 [Breutelia chrysea]
          Length = 199

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 10/205 (4%)

Query: 4   RESSKHKIDRRIGENLWGRPKSP-VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
               + +I RR+G       K+P +N  S  P         K S + ++L  KQK++ +Y
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLNLSSINP----STSNKKISQYRIRLEEKQKLRFHY 56

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 57  G-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 115

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +
Sbjct: 116 VNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENXXLVXQ 175

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 176 I---LDRESIGLKINELLVVEYYSR 197


>gi|20531111|gb|AAM27376.1| ribosomal protein 4 [Encalypta streptocarpa]
          Length = 191

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGILPGLTNKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +V+R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNECIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  VP ++S +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIIKNIDFSQKFKVPNHLSFDTLQKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|42556406|gb|AAS19798.1| small ribosomal protein 4 [Chaetophyllopsis whiteleggei]
          Length = 191

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISMNNNTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++   K  + + +   L ++  +P +++ +   +     +  +      
Sbjct: 117 SYNCEPGDIITIRNGQKSQSIITKNLNLFQKSKIPSHLTFDLTRLXGFVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|28194715|gb|AAO33619.1|AF480974_1 ribosomal protein S4 [Scopelophila cataractae]
          Length = 196

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SY CK  D I +K + K  A + +     ++  +P +++ N         +I   
Sbjct: 117 LVNIPSYCCKPQDFITIKDRQKSQALITKHIDFYQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|29422363|gb|AAO84577.1| small ribosomal protein 4 [Bartramia mathewsii]
          Length = 199

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGALPGLTNKPPQLKSSS---INQSXSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRC   D I +K + K  A + +     ++ ++P +++           +I
Sbjct: 117 NDRIVDIPSYRCXPHDFITIKDRPKSXAIISKNIDFYQKYEIPNHLTYGSSENKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLXINEXLVVEYYSR 197


>gi|254302865|ref|ZP_04970223.1| ribosomal protein S4 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323057|gb|EDK88307.1| ribosomal protein S4 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 195

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +         + R   P         KP+ +  QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI S+R K GDV+ V + SK +  +  A + A    P ++ ++        +
Sbjct: 115 IAVNGRRVNIASFRVKVGDVVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|67035702|gb|AAY62782.1| small ribosomal protein subunit 4 [Grimmia plagiopodia]
 gi|77019165|emb|CAH60188.1| chloroplast 30S ribosomal protein S4 [Grimmia elatior]
 gi|77019179|emb|CAH60195.1| chloroplast 30S ribosomal protein S4 [Grimmia laevigata]
          Length = 195

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DHESIGLKINELLVVEYYSR 193


>gi|3098170|gb|AAC15533.1| small ribosomal protein 4 [Brachymenium pulchrum]
          Length = 199

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +  RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRKKRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|118626053|emb|CAL39335.1| small ribosomal protein 4 [Adelanthus lindenbergianus]
          Length = 191

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ G++I +K K K  + + +   L +   +P +++ +   +     +  +      
Sbjct: 117 SYNCEPGNIITIKNKQKSQSIITKNINLFQNLKIPSHLTFDSIQLRGFVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|49182768|gb|AAT57846.1| small ribosomal protein [Nowellia curvifolia]
          Length = 195

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGILPGLSNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISMNNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SY C+ GD+I ++ K +  + + +   L ++   P +++ N   +  +  ++ +  
Sbjct: 117 IDIPSYNCQPGDIITIRNKLESRSMITKNINLFQKLKTPSHLTFNLTELQGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|63191841|gb|AAY34880.1| small ribosomal protein subunit 4 [Didymodon rigidulus]
          Length = 199

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNVDFSQKSKIPNHLTFNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|18920743|gb|AAL82416.1| ribosomal protein system 4 [Herzogiella striatella]
          Length = 194

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|328541054|gb|AEB21751.1| ribosomal protein S4 [Lembidium longifolium]
          Length = 195

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K       Y           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE R D  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +++K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ESIDLKINELLVVEYYSR 193


>gi|293634033|gb|ADE60396.1| ribosomal protein subunit 4 [Pogonatum cirratum]
          Length = 193

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VN
Sbjct: 57  LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|49182738|gb|AAT57831.1| small ribosomal protein [Lejeunea cladogyna]
          Length = 192

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K           L       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTE 53

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ +N   
Sbjct: 54  RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFSLGMAPTIPNARQLVNHRHIFINDCI 113

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +     
Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDSTKLQGLVNQTIRR- 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 --EWIDLKINELLVVEYYSR 190


>gi|3914853|sp|O20234|RR4_IRIEN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292909|emb|CAA92555.1| ribosomal protein S4 [Iris ensata]
          Length = 194

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  
Sbjct: 56  RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYR K  D+I  K   +  A +          ++P +++++         +I  S 
Sbjct: 116 VDILSYRSKPRDIITTKDNQRSKALIQNYLAWSPHEELPNHLTMDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|63078646|gb|AAY29409.1| ribosomal protein S4 [Oxystegus tenuirostris]
          Length = 197

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S            K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            +      + +   LVVE+YSR
Sbjct: 175 -VDQELIGLKINELLVVEYYSR 195


>gi|75858242|gb|ABA28695.1| small ribosomal protein 4 [Syzygiella geminifolia]
          Length = 191

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNGVVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD++  + K K  + + + + L ++  +P +++ +   +     ++ +      
Sbjct: 117 SYNCEPGDILTTRNKQKSQSIITKNTNLFQKVKIPSHLTFDLIQLRGFVNQMVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|309322234|ref|YP_003934312.1| ribosomal protein S4 [Monsonia speciosa]
 gi|197131488|gb|ACH47262.1| ribosomal protein S4 [Monsonia speciosa]
 gi|300069327|gb|ADJ66447.1| ribosomal protein S4 [Monsonia speciosa]
          Length = 208

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS---PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57
           MS     + K   R+G       +S     N++S    +   R   K S + ++L  KQ+
Sbjct: 1   MSHYRGPRFKKISRLGALPGLTKRSRIPKKNSKSNSRSIKPPRSSRKKSQYRIRLEEKQR 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           ++ +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VN
Sbjct: 61  LRFHYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPRARQLVN 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMV 176
           HRH+LVNG  V+I SYRCK  D+I  ++K K  A +      A R  +P++++ +     
Sbjct: 120 HRHILVNGHVVDIPSYRCKPRDIITAREKEKSRALIQNYLDAAPRKALPKHLTTHRRQYK 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I          + +   LVVE+YSR
Sbjct: 180 GLVNQIIDR---EWVGLKINEFLVVEYYSR 206


>gi|293634031|gb|ADE60395.1| ribosomal protein subunit 4 [Pogonatum cirratum]
          Length = 193

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VN
Sbjct: 57  LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D+I +K + +  A + +    +++  +P +++ N  +      +I   L  
Sbjct: 117 IPSYRCKPQDLITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLDKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|118626003|emb|CAL41739.1| small ribosomal protein 4 [Lethocolea congesta]
          Length = 191

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKALKPKSSY---IDHSTSNKKVSQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D I++R    PTI  ARQ VNH H+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRPDNIIFRLXMAPTIPGARQLVNHGHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GDVI VK K K  + ++    L +R  VP +++ +   +  +  +  +      
Sbjct: 117 SYSCQPGDVISVKNKQKSQSMIIRNINLFQRLKVPGHLTFDSAELQGSVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|78369623|gb|ABB43041.1| ribosomal protein 4 [Calymperes tahitense]
          Length = 199

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---NNQLLSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+
Sbjct: 58  -LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY+CK  D I +K + K    +++    + +  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYQCKPQDFITIKDQQKYQKIMVKNVNFSPKYKIPSHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   L+VE+YSR
Sbjct: 177 ---LDQESIGLKINELLIVEYYSR 197


>gi|20531105|gb|AAM27373.1| ribosomal protein 4 [Dicranoweisia cirrata]
          Length = 192

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI
Sbjct: 57  LNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LNQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|298346856|ref|YP_003719543.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 43063]
 gi|298236917|gb|ADI68049.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 43063]
          Length = 199

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  + K     R YGPG HG+ R+   S + ++L+ KQ+++  Y  I E 
Sbjct: 2   VRLSRALGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRAQYA-IREA 60

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +    F+EA R  G T  NL+  LE RLD +V RA F  T+F ARQ V HRH+LV+G+ V
Sbjct: 61  QLVKTFQEARRMEGQTGDNLVELLEMRLDALVLRAGFGRTMFQARQAVTHRHILVDGKIV 120

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  SY+ + G  ++VK  S+     + A++ + RD    VP+Y+ V+ + +  T  R P 
Sbjct: 121 DRPSYKVRPGQTVQVKPTSQVKDPFVVAARGSHRDVLPPVPDYLKVDLEKLRFTLERKPK 180

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    P+  +  LVVE YSR
Sbjct: 181 REE---VPIQCEVQLVVEHYSR 199


>gi|28194851|gb|AAO33687.1|AF481042_1 ribosomal protein S4 [Tortula vahliana]
          Length = 196

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGALPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|66866205|gb|AAY57776.1| small ribosomal protein 4 [Aulacomnium heterostichum]
          Length = 207

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 13/210 (6%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I RR+G       K+P +  S    +       K S + ++L   QK++ +Y
Sbjct: 3   RYRGPRVRIIRRLGALPGLTNKTPQSKSSS---IDQSTSNKKISQYRIRLEENQKLRFHY 59

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 60  G-ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 118

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE------RDVPEYISVNHDNMV 176
           VN R V+I SYRCK  D I +K + +  A +                +P +++ +     
Sbjct: 119 VNDRIVDIPSYRCKPQDFITIKDRQESEAIIXXXXXXKNIYFYQKYKIPNHLTYSSLEKK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I   L      + +   LVVE+YSR
Sbjct: 179 GLVNQI---LDRESIGLKINELLVVEYYSR 205


>gi|222103458|gb|ACM44258.1| small ribosomal protein subunit 4 [Pleurozium schreberi]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L   LE RLD +++R    PTI  ARQ VNH H+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|77019143|emb|CAH60177.1| chloroplast 30S ribosomal protein S4 [Codriophorus aciculare]
          Length = 195

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DHESIGLKINELLVVEYYSR 193


>gi|293634039|gb|ADE60399.1| ribosomal protein subunit 4 [Pogonatum japonicum]
          Length = 195

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R 
Sbjct: 57  RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|28194787|gb|AAO33655.1|AF481010_1 ribosomal protein S4 [Crossidium seriatum]
          Length = 196

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P         ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLK---PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMISKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|20531066|gb|AAM27355.1| ribosomal protein 4 [Pogonatum perichaetiale]
          Length = 195

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R+
Sbjct: 57  RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|20531064|gb|AAM27354.1| ribosomal protein 4 [Polytrichadelphus aristatus]
          Length = 192

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++ Q    K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPXXKSGY---INQQTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R+ G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI
Sbjct: 57  LNYVRXARRAXGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A ++     +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIDLKINELLVVEYYSR 190


>gi|315604259|ref|ZP_07879325.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313965|gb|EFU62016.1| 30S ribosomal protein S4 [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 207

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 9/211 (4%)

Query: 1   MSKRESSK-HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M+   S K  +  R +G  L  +       R YGPG HG+ R+ + S + ++L+ KQ+++
Sbjct: 1   MATNRSRKQVRESRALGLALTPKAVRYFEKRPYGPGEHGRTRRRQDSDYAVRLKEKQRLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E + R  F+EA R+ G T  NL+  LE RLD +V RA F  TI  ARQ V HR
Sbjct: 61  AQYG-IRESQLRRAFEEARRTAGLTGENLVELLEMRLDALVLRAGFSRTIQQARQVVVHR 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNM 175
           H+LV+G+ V+  S+R K G  I+VK KS+       A++   RD    VPEY+ V+   +
Sbjct: 120 HILVDGKIVDRPSFRVKPGQTIQVKPKSQTTVPFEIAAEGIHRDVLPAVPEYLDVDLARL 179

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            AT VR P   +    PV +   +VVE YSR
Sbjct: 180 KATLVRRPKRAE---VPVTVDVQMVVEHYSR 207


>gi|254519679|ref|ZP_05131735.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA]
 gi|226913428|gb|EEH98629.1| ribosomal protein S4 [Clostridium sp. 7_2_43FAA]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + K  RR+G N++G PK  +N    G      R   K S +G++L  KQ+++ 
Sbjct: 1   MARERGPRFKQSRRLGLNVYGHPK-AMNRAVKGT----SRADKKLSEYGVRLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRG-DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
           YYG + EK+F+   ++A +++   T   L+  LESRLD +VYR  F  +I AARQ VNH 
Sbjct: 56  YYGVL-EKQFKKYVEDAFKTKEGTTGEALLLRLESRLDNLVYRIGFANSIRAARQMVNHG 114

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+LV+G+ ++I SY+ + G  I + +K+++  + +         +P YI  N D   A +
Sbjct: 115 HILVDGKKIDIPSYKVEPGTEISLTEKARKSPNYISNINGHVNTLP-YIDSNLDEFKAVY 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P   +    P+ +  NL+VEFYSR
Sbjct: 174 TRYPLREE---IPIQINENLIVEFYSR 197


>gi|28194701|gb|AAO33612.1|AF480967_1 ribosomal protein S4 [Hymenostylium recurvirostre]
          Length = 196

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|42556478|gb|AAS19834.1| small ribosomal protein 4 [Pedinophyllum truncatum]
          Length = 191

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTFKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNGIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD I ++ K +  + + + + L ++  +P +++ +   +     +  +      
Sbjct: 117 SYNCEPGDTITIRNKQRSQSIITKNTNLFQKIKIPSHLTFDLTQLRGFVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|222103518|gb|ACM44288.1| small ribosomal protein subunit 4 [Hylocomium splendens]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 YIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|18920787|gb|AAL82438.1| ribosomal protein system 4 [Rhizofabronia perpilosa]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K +      + +  +  ++  +P +++ +         +I  
Sbjct: 117 FIVDIPSYRCKPQDFITIKNQRNSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|59803313|gb|AAX07765.1| Rps4 [Pellia endiviifolia]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+     SY   ++      K S + ++L  KQK++ +YG ++E+
Sbjct: 4   CKIIRRLGALPGLTSKTLKLESSY---INQSTPNKKISQYRIRLEEKQKLRFHYG-LTER 59

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+++N  +V
Sbjct: 60  QLLKYVRIARKTKGSTGEVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHGHIVINDYTV 119

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY C+  DVI +K ++K  + + +      +  +P +++ +      +  +      
Sbjct: 120 DIPSYNCEPRDVITIKNRNKSQSLITKNMDSFRKQKIPNHLTFDFTKFRGSVNKTIDR-- 177

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 178 -ECIDLKINELLVVEYYSR 195


>gi|3098230|gb|AAC15563.1| small ribosomal protein 4 [Brachythecium rutabulum]
 gi|222103546|gb|ACM44302.1| small ribosomal protein subunit 4 [Brachythecium rutabulum]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|63191645|gb|AAY34784.1| small ribosomal protein subunit 4 [Matteria gracillima]
          Length = 202

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 5   RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 60

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 61  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 120

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K    + +     ++  +P ++  N         +I 
Sbjct: 121 HRIVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI- 179

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 180 --LDRELIGLKINELLVVEYYSR 200


>gi|222103520|gb|ACM44289.1| small ribosomal protein subunit 4 [Polytrichum juniperinum]
          Length = 196

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 2   RVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R 
Sbjct: 58  RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +  A +      ++   +P +++ N         +I   L
Sbjct: 118 VNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---L 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 175 DRESINLKINELLVVEYYSR 194


>gi|222103488|gb|ACM44273.1| small ribosomal protein subunit 4 [Polytrichum sphaerothecium]
          Length = 196

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 2   RVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   
Sbjct: 58  RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDCI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +    +      +++  +P +++ N         +I   L
Sbjct: 118 VNIPSYRCKPQDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 175 DRESISLKINELLVVEYYSR 194


>gi|238809857|dbj|BAH69647.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 216

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           +      K  RR G ++    K  S    R+Y PG HG +R  K S +GL L  KQK+K 
Sbjct: 20  RYRGPVFKKSRRYGFSILETGKEFSKGRKRTYAPGQHGDKR-VKLSDYGLHLYEKQKVKY 78

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++EK+    +  A + +G T   L+  LESRLD +VYRA F  T   ARQ V+H H
Sbjct: 79  LYG-LNEKQMHKYYIRATKIKGVTGTVLLQLLESRLDNLVYRAGFASTRRQARQLVSHGH 137

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             +NG   +I S   + G  I++K+KS++   +     L +R   +++++       ++ 
Sbjct: 138 FTLNGHKADIPSMNVEVGSKIQLKEKSQKNKIIEAN--LKDRSAAKWLTI--KGFEVSYD 193

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +  P    ++ N +VEFYS+
Sbjct: 194 RLPDRSELHP---EIKENFIVEFYSK 216


>gi|157689416|gb|ABV65264.1| ribosomal protein S4 [Atuna racemosa]
          Length = 193

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTRKRP----RAVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +       A +++G T   L+  +E RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVCIAAKAKGSTGQVLLQLIEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I VK + K  A +       A+ ++P++++ +         +I  S  
Sbjct: 116 DIPSYRCKPRDIITVKDEQKSRAMIQNHLDSSAQEELPKHLTFHPFQHKGLVNQIIDSK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WIGLKINELLVVEYYSR 191


>gi|62287269|sp|Q6H9L5|RR4_EQUBO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927193|emb|CAE47532.1| small ribosomal protein 4 [Equisetum bogotense]
          Length = 207

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+  NL G     V ++        Q  + K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLKIIRRLR-NLPGLTNKLVESKKNQASGSDQSIQKKVSQYCIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V++ S+ CK  D+I +       + + +  +  A+  +P+++++         
Sbjct: 119 ILVNDRIVDVPSFHCKPKDIITIGAPKIYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|63078624|gb|AAY29398.1| ribosomal protein S4 [Tortella fragilis]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|63191817|gb|AAY34868.1| small ribosomal protein subunit 4 [Rhexophyllum subnigrum]
          Length = 199

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P   R      +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKIP---RLKSSSTNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|258591342|emb|CBE67641.1| 30S ribosomal subunit protein S4 [NC10 bacterium 'Dutch sediment']
          Length = 192

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 6/183 (3%)

Query: 25  SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
             +  R+Y PG+HGQ R++K S +  QLR KQKM++ YG + E +FR  F+ A++  G T
Sbjct: 15  CAIEKRNYAPGMHGQ-RRAKVSDYCKQLREKQKMRRIYGVL-ETQFRKYFRLAEQQTGMT 72

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
             NL+  LE RLD++V+R  F  +   AR  + H H+LVNGR  +I SYR ++G+ IEV+
Sbjct: 73  GENLVRILEQRLDSVVHRLGFAASRAQARLLITHGHILVNGRKTDIASYRVRQGETIEVR 132

Query: 145 QKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
            KS+++ ++  A + +  R +P ++ ++  NM  T   IPS  +     + ++  L+V  
Sbjct: 133 PKSREMTAIKTALEGVKRRTLPSWLELDATNMKGTVRSIPSREE---IAIPVEEQLIVAL 189

Query: 204 YSR 206
           YS+
Sbjct: 190 YSK 192


>gi|75858232|gb|ABA28690.1| small ribosomal protein 4 [Gyrothyra underwoodiana]
          Length = 191

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKILKSKSSY---IDRSSSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVYIARKTKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDPVELQGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|315652327|ref|ZP_07905319.1| 30S ribosomal protein S4 [Eubacterium saburreum DSM 3986]
 gi|315485450|gb|EFU75840.1| 30S ribosomal protein S4 [Eubacterium saburreum DSM 3986]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G           + R        +R   K S +G+QLR KQK K 
Sbjct: 1   MAINRVPVLKRCRSLGLEPGFLGIDKKSNRDT------KRANRKLSEYGMQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A+R +G    NL+  LE RLD +V+R     T    RQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKAERMKGQVGENLMILLERRLDNVVFRMGLGRTRKETRQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+K+K+K  A   E  +  A R VP +I  + +N+  T 
Sbjct: 114 VLVNGKCVNIPSYLVKPGDVIEIKEKAKSSARYKEVVESTAGRIVPAWIDADLENLKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KSLPTREE---IDVPVDELLIVELYSK 197


>gi|80974146|gb|ABB53766.1| small ribosomal subunit protein 4 [Garovaglia angustifolia]
          Length = 202

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K P    S    ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKISQYRVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T    +  LE RLD I++R    PTI   R  VNH H
Sbjct: 58  HYG-ITERQLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPXXRXLVNHXH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN   VNI SYRCK  DVI VK +      + +     ++  +P +++          
Sbjct: 117 ILVNDXIVNIPSYRCKPQDVIIVKNEKNSEGVINKDEDFHQKYKIPNHLTYIFLEKKGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYS 205
            +I   L      + +   LVVE+YS
Sbjct: 177 SKI---LDRESIGLKINELLVVEYYS 199


>gi|67035606|gb|AAY62734.1| small ribosomal protein subunit 4 [Garckea phascoides]
          Length = 199

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSSS---TNQSXSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGXAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K    + + +  +++  VP ++  N         +I
Sbjct: 117 NNRIVNIPSYRCKPQDFITIKDRQKSQXMITKNAXFSQKYKVPNHLXFNFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIXLKINELLVVEYYSR 197


>gi|63191843|gb|AAY34881.1| small ribosomal protein subunit 4 [Tridontium tasmanicum]
          Length = 199

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRHVLV
Sbjct: 58  -ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVLV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I
Sbjct: 117 NNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNIDFSQKSKIPNHLTFNSLEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|11467476|ref|NP_043622.1| ribosomal protein S4 [Odontella sinensis]
 gi|1350894|sp|P49492|RR4_ODOSI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|1185171|emb|CAA91654.1| 30S ribosomal protein S4 [Odontella sinensis]
          Length = 206

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 11/211 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR----KSKPSYFGLQLRAKQ 56
           MS+    K +I RR+G       K     +   PG HG+        K + +G++L  KQ
Sbjct: 1   MSRYRGPKLRITRRLGALPGLTQKQS--KKKGRPGQHGKSNEADNSKKTTEYGIRLEEKQ 58

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+K  YG ++E +     KEA R +G T   L+  LE RLDTI +   F PTI +ARQ V
Sbjct: 59  KLKFNYG-LTESQLYRYIKEARRRKGVTGLILLQLLEMRLDTICFTLGFAPTIASARQLV 117

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
           NH H+ VN   V+I S++C+  DVI +K K+     V    Q + + D+P ++  +    
Sbjct: 118 NHGHITVNDNVVSIPSFQCQINDVIGIKPKATSKNLVEGNLQTIKQVDLPTHLKFDKSKQ 177

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            AT +      + +     +    V+E+YSR
Sbjct: 178 EATVINYCDRNELLLNLDELL---VIEYYSR 205


>gi|49182744|gb|AAT57834.1| small ribosomal protein [Lepidolaena sp. Engel 23052]
          Length = 195

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGTLPGLTSKKLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ +N  +
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISINNET 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ + K  + + +      + ++P ++++N   +  +        
Sbjct: 117 VDIPSYNCEPGDIITIRNREKSQSIITKNINSFHKSEIPNHLTLNSTQLRGSINTTIHR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ECIDLKVNELLVVEYYSR 193


>gi|63101093|gb|AAY33171.1| small ribosomal protein 4 [Desmotheca apiculata]
          Length = 197

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K   K    + +     ++  +P ++  N         +I  
Sbjct: 117 RIVDIPSYRCKPLDFITIKDGRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRELIGLKINELLVVEYYSR 195


>gi|19704619|ref|NP_604181.1| 30S ribosomal protein S4 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296329034|ref|ZP_06871540.1| 30S ribosomal protein S4 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|26399398|sp|Q8RE43|RS4_FUSNN RecName: Full=30S ribosomal protein S4
 gi|19714919|gb|AAL95480.1| SSU ribosomal protein S4P [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296153838|gb|EFG94650.1| 30S ribosomal protein S4 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 195

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +         + R   P         KP+ +  QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI S+R K GD++ V + SK +  +  A + A    P ++ ++        +
Sbjct: 115 IAVNGRRVNIASFRVKVGDIVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|269308862|gb|ACZ34322.1| ribosomal protein small subunit 4 [Oedipodiella australis]
          Length = 195

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R     TI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMALTIPEARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +    +++  VP +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|313678349|ref|YP_004056089.1| 30S ribosomal protein S4 [Mycoplasma bovis PG45]
 gi|312950635|gb|ADR25230.1| ribosomal protein S4 [Mycoplasma bovis PG45]
          Length = 198

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 11/206 (5%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           +      K  RR G ++    K  S    R+Y PG HG +R  K S +GL L  KQK++ 
Sbjct: 2   RYLGPVFKKARRYGISILENEKEFSKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKVRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+ + I+  A + +G    NL+  LESR D +VYRA F  T   ARQ V H H
Sbjct: 61  IYG-ISEKQLQKIYSRAIKMKGVAGTNLLQLLESRFDNVVYRAGFATTRRQARQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             +NG++ +I S     GDVI +K K++  A V  A +   +    +++V   N      
Sbjct: 120 FQLNGKNADIPSMHISVGDVITLKAKTQNNAQVKAALES--KPAAAWLTV--KNFEVKVD 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       ++ N V+E YS+
Sbjct: 176 RLPDRSE---LNPNVKENFVIEHYSK 198


>gi|75858236|gb|ABA28692.1| small ribosomal protein 4 [Plagiochilion conjugatum]
          Length = 191

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH+H+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHKHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|63191671|gb|AAY34797.1| small ribosomal protein subunit 4 [Pylaisia polyantha]
          Length = 199

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGXLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKXKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VBI SYRCK  D I +K + K    + +  +  ++   P +++ +         +I
Sbjct: 117 NDCIVBIPSYRCKPQDFITIKNQRKSEXIINKNIEFYQKSKXPNHLTYSXLXKKGLVXQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|42556410|gb|AAS19800.1| small ribosomal protein 4 [Chiloscyphus cuspidatus]
 gi|227345125|gb|ACP28115.1| small ribosomal protein 4 [Chiloscyphus novae-zeelandiae var.
           grandistipulus]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|118626039|emb|CAL41745.1| small ribosomal protein 4 [Anastrophyllum saxicola]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNNTVDIS 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSVITKNINLFQKLKIPSHLTFDLTQLXGSINQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|293634059|gb|ADE60409.1| ribosomal protein subunit 4 [Pogonatum urnigerum]
          Length = 194

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 57  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|46811028|gb|AAT01832.1| small ribosomal protein 4 [Metzgeria conjugata]
          Length = 197

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 107/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N 
Sbjct: 57  TERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINK 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +   ++ +  R+ +
Sbjct: 117 DIVDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSVNRMIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWIDLKINELLVVEYYSR 195


>gi|42556520|gb|AAS19855.1| small ribosomal protein 4 [Zoopsis argentea]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY           K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISMNDNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIIMIRDKQKSQSMITKNINLFQNLKIPSHLTFDSTKLCGSINQTINR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IHLKINELLVVEYYSR 189


>gi|116010493|emb|CAL37353.1| ribosomal protein S4 [Vinca major]
          Length = 194

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RLKKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMATTIPTARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K  A + ++       ++P ++ +          +I  S 
Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRALIQKSLDSYPHGELPSHLILQPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WVGLKINELLVVEYYSR 192


>gi|37960615|gb|AAP70677.1| small ribosomal protein 4 [Sphagnum tenerum]
          Length = 195

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +   Y   +       K S + + L  KQK++ +YG I+E+
Sbjct: 2   VRIXRRLGVLPGLTSKTPQSKSXY---IXQPISNKKVSQYRIXLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|67035562|gb|AAY62712.1| small ribosomal protein subunit 4 [Pseudephemerum nitidum]
          Length = 194

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMISKNIDFSQKSKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|150390763|ref|YP_001320812.1| 30S ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
 gi|172052482|sp|A6TSI5|RS4B_ALKMQ RecName: Full=30S ribosomal protein S4 B
 gi|149950625|gb|ABR49153.1| RNA-binding S4 domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 199

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + K  RR+G N+ G PK+    +    G    +RK     +G+QL  KQ+++ 
Sbjct: 1   MARMRQPRFKTCRRLGINVCGHPKAM---KRADNGQVRDKRKLSS--YGIQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY ++ EK+F+   K A +    T ++LI  LE RLD +VYR  F  +I  ARQ V H H
Sbjct: 56  YY-EVMEKQFKIYVKAAIKDSETTGNSLIKKLECRLDNLVYRTGFGSSIRQARQMVVHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+  S+    GD I +++KS++    ++           YI+ N        +
Sbjct: 115 ILVNGKKVDRPSFAVSVGDDISLREKSRKNKIFIDNFLRNVDFSYPYIAKNEAGFSGQLI 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ +  +LVVEFYS+
Sbjct: 175 RMPERHE---APIEVNDHLVVEFYSK 197


>gi|148377824|ref|YP_001256700.1| 30S ribosomal protein S4 [Mycoplasma agalactiae PG2]
 gi|148291870|emb|CAL59261.1| 30S ribosomal protein S4 [Mycoplasma agalactiae PG2]
          Length = 198

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 11/206 (5%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           +      K  RR G ++    K  S    R+Y PG HG +R  K S +GL L  KQK++ 
Sbjct: 2   RYLGPVFKKARRYGISILENEKEFSKGKKRTYAPGQHGNKR-VKLSDYGLHLYEKQKVRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISEK+ + I+  A + +G    NL+  LESR D +VYRA F  T   ARQ V H H
Sbjct: 61  IYG-ISEKQLQKIYARAIKMKGVAGTNLLQLLESRFDNVVYRAGFATTRRQARQLVAHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             +NG++ +I S     GDVI +K K++    V  A +   +    +++V   N  A   
Sbjct: 120 FQLNGKNADIPSMHISVGDVITLKAKTQNNNQVKAALES--KPAAAWLTV--KNFEAKVD 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P+  +       ++ N V+E YS+
Sbjct: 176 RLPNRSE---LNPNVKENFVIEHYSK 198


>gi|28194785|gb|AAO33654.1|AF481009_1 ribosomal protein S4 [Tortula brevissima]
          Length = 196

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMISKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|63191779|gb|AAY34849.1| small ribosomal protein subunit 4 [Dawsonia superba]
          Length = 195

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R 
Sbjct: 57  RQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|28194815|gb|AAO33669.1|AF481024_1 ribosomal protein S4 [Tortula muralis]
 gi|28194817|gb|AAO33670.1|AF481025_1 ribosomal protein S4 [Tortula muralis]
 gi|28194819|gb|AAO33671.1|AF481026_1 ribosomal protein S4 [Tortula muralis]
 gi|28194821|gb|AAO33672.1|AF481027_1 ribosomal protein S4 [Tortula muralis]
          Length = 196

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGILPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|157689502|gb|ABV65307.1| ribosomal protein S4 [Ixerba brexioides]
          Length = 197

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++
Sbjct: 1   PRFKKIRRLGALPGLTNKRP----KAGSNLRNQSRSVKKSQYRIRLEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD I +R     TI  ARQ VNHRH+LVNG 
Sbjct: 56  ERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIFFRLGMASTIPQARQLVNHRHILVNGH 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIP 183
            V+I SYRCK  D+I  + + K  A +      +     ++ +++++          +I 
Sbjct: 116 IVDIPSYRCKPRDIITARDEQKSRALIQNYLDSSFHFHEELTKHLTLYPSQYKGLVNQII 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            S       + +   LVVE+YSR
Sbjct: 176 DSK---WVGLKINELLVVEYYSR 195


>gi|7109205|gb|AAF36678.1| ribosomal protein 4 [Timmia megapolitana]
          Length = 194

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNDHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|253580647|ref|ZP_04857911.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848018|gb|EES75984.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 197

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         +TR        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK F + + +ADR  G T  NL+  LESRLD +V+R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFHNYYDKADRMPGQTGANLMILLESRLDNVVFRMGFARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GD IE+++KSK         +    R VPE+I V+ +N+  T 
Sbjct: 114 VLVNGKCVNIPSYLVKAGDQIEIREKSKGSERYKGILEVTGGRLVPEWIDVDQENLKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPNR---EAIDVPVNEMLIVELYSK 197


>gi|157689522|gb|ABV65317.1| ribosomal protein S4 [Morella cerifera]
          Length = 189

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       + P      G  L  Q R SK S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGALPGLTSRRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I S
Sbjct: 56  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I  + + K +  +      + R ++P++++++         +I  S      
Sbjct: 116 YRCKPQDIITARDEQKSIVLIQNYLDSSPREELPKHLTLHPFQYKGLVNQIVDSK---WV 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|28194793|gb|AAO33658.1|AF481013_1 ribosomal protein S4 [Pottia intermedia]
          Length = 196

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I + ++ K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|75858222|gb|ABA28685.1| small ribosomal protein 4 [Adelanthus bisetulus]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTFKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ G++I +K K K    + +   L +   +P +++ +   ++    +I +      
Sbjct: 117 SYNCEPGNIITIKNKRKSQLIITKNINLFQNLKIPSHLTFDSIQLLGFVNQIVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|92417465|gb|ABE76828.1| ribosomal protein subunit 4 [Jaegerina scariosa]
          Length = 197

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K P         ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             VNI SY+CK  D I +K + K    + +  +  ++  +P +++ N         +I  
Sbjct: 117 CIVNIPSYQCKSQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LNRESIDLKINELLVVEYYSR 195


>gi|42556514|gb|AAS19852.1| small ribosomal protein 4 [Tritomaria quinquedentata]
          Length = 190

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGALPGLTNKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +       
Sbjct: 117 YNCEPGDIITIRNKRKSQSIITKNLNLFQKMKIPSHLTFDLTQLQGSVNQTVNR---EWV 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 NLKINELLVVEYYSR 188


>gi|320120610|gb|EFE29196.2| 30S ribosomal protein S4 [Filifactor alocis ATCC 35896]
          Length = 218

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 14/205 (6%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++    + K+ RR G N+   PK+            G  +  K S +G QL  KQK+K Y
Sbjct: 28  ARPRGPRFKVARRFGVNVCAHPKALK---------RGATQVRKQSDYGKQLNEKQKLKAY 78

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           Y  + EK+F +  + A  ++G+   NL+  LE RLD +VYR  F  T+  ARQ V H H+
Sbjct: 79  YD-MQEKQFANWVEAAMSAKGNAGENLVQRLECRLDNLVYRLGFGSTLRQARQMVVHHHI 137

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181
           LVNG+ V+  SY  K GDVI ++++S+ + +     + +  ++  Y+  + +N+    V 
Sbjct: 138 LVNGKRVDRPSYEVKVGDVISLRERSQSIDTFKNNFKESLCNL-SYLQKDENNLSGKLVA 196

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           +PS  +    P+ +  +L++E+YS+
Sbjct: 197 LPSREE---VPIEVTDSLIIEYYSK 218


>gi|42556408|gb|AAS19799.1| small ribosomal protein 4 [Chandonanthus sp. He-Nygren 492]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISVNNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYSCESGDIITIRNKQKSQSIITKNINLFQKSKIPSHLTFDLTQLRGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|18920797|gb|AAL82443.1| ribosomal protein system 4 [Taxiphyllum wissgrillii]
          Length = 197

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             ++I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 CILDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|75858234|gb|ABA28691.1| small ribosomal protein 4 [Nardia compressa]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYSCELGDIITVKNKQKSQSIITKNINLFQKLKIPSHLTFDSIQLRGSVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|28194855|gb|AAO33689.1|AF481044_1 ribosomal protein S4 [Eucladium verticillatum]
          Length = 196

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRQKSQIMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|49182686|gb|AAT57805.1| small ribosomal protein [Cephalozia catenulata]
          Length = 195

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGVLPGLTSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISMNNDM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SY C+ GD+I ++ K K  + V +   L ++  +P +++ +   +  +  ++ +  
Sbjct: 117 IDIPSYNCEPGDIITIRNKEKSKSLVTKNINLFQKLKMPSHLTFDPIQLQGSVNQMVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EGVNLKINELLVVEYYSR 193


>gi|67035881|gb|AAY62867.1| small ribosomal protein subunit 4 [Clastobryum tenuirameum]
          Length = 200

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 8/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + +I  R+G       K+P         ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVRIICRLGTLPGLTNKTPQLESGS---INQSTSNKKISQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           VN   V+I SYRCK  D I +K + K    + +  +  ++  +P ++  +         +
Sbjct: 117 VNDCMVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLIYSSLEKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 177 IVDR---ESIGLKINELLVVEYYSR 198


>gi|77019139|emb|CAH60176.1| chloroplast 30S ribosomal protein S4 [Grimmia cribrosa]
          Length = 195

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKTKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRV 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A +++     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFPQKYKIPNHLTFNSLENKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DHEAIGLKINELLVVEYYSR 193


>gi|291542058|emb|CBL15168.1| SSU ribosomal protein S4P [Ruminococcus bromii L2-63]
          Length = 200

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K      K  R +G +    G  K   N         G + + K S + +QL  KQK+
Sbjct: 1   MAKNMQPIAKRCRALGISPAVMGYSKKTSNRNP------GGKMRRKKSEYSMQLTEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I EK+FR+ +++A+++ G T   L++ +E RLD +++R     T   ARQ V+H
Sbjct: 55  KFIYG-IMEKQFRAYYEKAEKAEGKTGAVLLTLIERRLDNVIFRLGLAATRREARQLVSH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV--PEYISVNHDNMV 176
            H  VNG+ VNI SY  K GDVIEVK+KS+  A     ++     +  P+++  N + + 
Sbjct: 114 SHFTVNGKKVNIPSYLVKVGDVIEVKEKSRSTARFKAIAEGETSSIVTPKWLEKNENLLG 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              V  P   +D+ +PV  + +L+VE YS+
Sbjct: 174 GKVVAAPQR-EDIDFPV--EEHLIVELYSK 200


>gi|293634035|gb|ADE60397.1| ribosomal protein subunit 4 [Pogonatum convolutum]
          Length = 192

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI
Sbjct: 57  LNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQQKSQAIIAKNIDFSQKYKIPNHLTFNSLKKKGLVNQI---LNRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|37992437|gb|AAR06397.1| small ribosomal protein 4 [Callicostella diatomophila]
          Length = 198

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
                KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPCVKIIRRLGVLPGLTNKIPELKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH+LVN
Sbjct: 57  ITEQQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I 
Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQIL 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 177 DRD---SIGLKINELLVVEYYSR 196


>gi|157785982|gb|ABV74165.1| small ribosomal protein 4 [Hypopterygium didictyon]
          Length = 197

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG
Sbjct: 57  TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNG 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I  
Sbjct: 117 YIVDIPSYRCKPQDFINIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LNRESIGLKINELLVVEYYSR 195


>gi|83940947|gb|ABC48870.1| rps4 [Sinojackia oblongicapra]
          Length = 193

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       K P+     G  L  Q R  K S + ++L  KQK++ +YG ++E++ 
Sbjct: 3   KIRRLGALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I
Sbjct: 58  LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D+I  + + K  A +  +   +   ++P+++++          +I  S    
Sbjct: 118 PSYRCKPRDIITARDEQKSRALIQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK--- 174

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 175 WIGLKINELLVVEYYSR 191


>gi|75858226|gb|ABA28687.1| small ribosomal protein 4 [Anthelia julacea]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+   E RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLPEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I VK K K    + +   L ++  +P ++  +   +     +  +      
Sbjct: 117 SYNCQPGDIITVKNKQKSQLIIAKNINLFQKLKIPSHLIFDFTELRGVVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|238916291|ref|YP_002929808.1| small subunit ribosomal protein S4 [Eubacterium eligens ATCC 27750]
 gi|259495278|sp|C4Z2V6|RS4_EUBE2 RecName: Full=30S ribosomal protein S4
 gi|238871651|gb|ACR71361.1| small subunit ribosomal protein S4 [Eubacterium eligens ATCC 27750]
          Length = 197

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R +  +         + R        +    K S +G+QLR KQK K 
Sbjct: 1   MAVNRTPVLKRCRSLEMDPVYLGIDKKSRRKA------KNAGRKVSEYGMQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +K+A+R +G T  NL+  LE RLD +++R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYKKAERQKGMTGENLMIMLELRLDNVLFRLGFARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+++KSK  A   E  +    R VPE++  + D +  + 
Sbjct: 114 VLVNGKCVNIPSYLVKAGDVIEIREKSKSSARYKEILESTNGRLVPEWLEADADALKGSV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             IP+        V +   L+VE YS+
Sbjct: 174 KSIPTR---EVIDVPVNEMLIVELYSK 197


>gi|75858230|gb|ABA28689.1| small ribosomal protein 4 [Delavayella serrata]
          Length = 191

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I VK K K  + + +   L ++  +P ++  +  N+  +  +  +      
Sbjct: 117 SYNCEPGDIITVKNKQKSQSIITKNINLFQKSKIPSHLIFDSTNLSGSVNQTINR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|118626037|emb|CAL39331.1| small ribosomal protein 4 [Anastrophyllum minutum]
          Length = 191

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIS 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|67035740|gb|AAY62801.1| small ribosomal protein subunit 4 [Timmiella anomala]
          Length = 191

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D + +K + K  A +++  +  ++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFVTIKDRQKSQAIIIKNIEFFQKYKVPSHLTFNSLQKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|42556394|gb|AAS19792.1| small ribosomal protein 4 [Balantiopsis cancellata]
          Length = 191

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD I V+ + K  + + +   L     +P +++ +   +     +  +      
Sbjct: 117 SYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSTKLRGLVNQTINR---EL 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|63191743|gb|AAY34831.1| small ribosomal protein subunit 4 [Cryptopodium bartramioides]
          Length = 197

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGVLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +     ++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKYQTIISKNIDFCQKYKIPHHLTYNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIALKINELLVVEYYSR 195


>gi|20531113|gb|AAM27377.1| ribosomal protein 4 [Grimmia laevigata]
          Length = 194

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 HESIGLKINELLVVEYYSR 192


>gi|33413227|emb|CAD86749.1| ribosomal protein small subunit 4 [Oreoweisia erosa]
          Length = 191

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|152031676|sp|Q7UXM6|RS4_RHOBA RecName: Full=30S ribosomal protein S4
          Length = 202

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++    K +I+RR+G  L+        ++ R   PG+H + R+  PS +G  L  KQK+
Sbjct: 1   MARYTGPKARINRRLGTMLYETAGAARAMDRRPQPPGMHTRGRR--PSNYGAALMEKQKI 58

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K YYG + E++ R  F+   R  G+T   L+   E RLD +V R  F  T   ARQ + H
Sbjct: 59  KHYYG-LGERQLRRYFENVGRKSGNTGELLLLMCERRLDNVVRRVGFTKTRPQARQGITH 117

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  VNG  V    Y  + GD+IEV+ +             +  D  +++S + + + AT
Sbjct: 118 GHFRVNGVKVTKPGYMLRAGDLIEVRGRENLKNLYRGVIANSPPDGLDWVSFDSETLRAT 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + +P ++ D+  PV      VVEF SR
Sbjct: 178 VLSLPGAV-DISLPVDANS--VVEFLSR 202


>gi|37960603|gb|AAP70671.1| small ribosomal protein 4 [Sphagnum recurvum]
          Length = 192

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   LLRRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI
Sbjct: 57  LKYVRIARRTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A +  +   +     P +++++      +  +I       
Sbjct: 117 PSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|296126890|ref|YP_003634142.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563]
 gi|296018706|gb|ADG71943.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563]
          Length = 208

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 12/213 (5%)

Query: 1   MSKRESSKHKIDRRIGENL------WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  ++ RR    L          K  +  +   PG   ++ K    Y G+Q+R 
Sbjct: 1   MARYRDASCRLCRREKMKLMLKGERCLTAKCAITKKREVPGPVNRKMKQLSEY-GIQMRE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK+K+ YG + EK+FR+ + EA R  G +  NL+  LE RLD +VYR  F  +   ARQ
Sbjct: 60  KQKVKRIYGVL-EKQFRNYYHEAIRVAGVSGENLLRLLELRLDNVVYRLGFAKSRNQARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHD 173
           FV H  + VNG+ ++I SY  K GD I   +    +  V   ++  + + VP ++S++  
Sbjct: 119 FVAHGFISVNGKKMSIPSYSIKVGDKISFTENGNAIGEVKAIAEGLKSEYVPAWLSLDLS 178

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +     V +P     + YP  +   L++E+YS+
Sbjct: 179 SKTGEIVTLPIR-DHIEYP--INEQLIIEYYSK 208


>gi|227541761|ref|ZP_03971810.1| 30S ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182467|gb|EEI63439.1| 30S ribosomal protein S4 [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 178

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 6/182 (3%)

Query: 26  PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
               R Y PG  G+ R  +  Y  +QL+ KQK +  YG I EK+F   ++EA R +G T 
Sbjct: 2   AFERRPYPPGQAGRARIKESEYL-IQLQEKQKARFTYG-IMEKQFHRYYEEAARRKGKTG 59

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            NL+  LESRLD ++YRA    T   ARQ V H H LVNG   NI S++  + D+I+VK+
Sbjct: 60  DNLVILLESRLDNVIYRAGLARTRRQARQLVTHGHFLVNGVKTNIPSFQVSQYDIIDVKE 119

Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           KS+++    EA   L +  VP ++ V    +     ++P   +     + +Q  L+VEFY
Sbjct: 120 KSRKMLWFEEAQDGLVDAVVPAWLQVVPSTLRILVHQLPERAQ---IDIPLQEQLIVEFY 176

Query: 205 SR 206
           S+
Sbjct: 177 SK 178


>gi|49182673|gb|AAT57799.1| small ribosomal protein [Ascidiota blepharophylla subsp. alaskana]
          Length = 194

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI R +G       K+     SY   +       K S + ++L  KQK++ +YG ++E++
Sbjct: 2   KIIRXLGALPGFTGKTLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A  ++G T   L+  LE RLD  ++     PTI  ARQ VNH+H+ +N  +V+
Sbjct: 58  LLKYVRIARNAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHKHISINNDTVD 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SY C+ GD+I +K   K  + + +     ++ ++P +++ +   +  +  ++ +    
Sbjct: 118 IPSYNCEPGDIIXIKNSGKSQSIITKNMNSFQKLEIPNHLTFDSTQLRGSVNQMINR--- 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 EWINLKVNELLVVEYYSR 192


>gi|15829187|ref|NP_326547.1| 30S ribosomal protein S4 [Mycoplasma pulmonis UAB CTIP]
 gi|26399464|sp|Q98PK6|RS4_MYCPU RecName: Full=30S ribosomal protein S4
 gi|14090131|emb|CAC13889.1| 30S RIBOSOMAL PROTEIN S4 [Mycoplasma pulmonis]
          Length = 199

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+  SS  K  RR+G ++    K       R+Y PG HGQ R++K S +GL L  KQK+
Sbjct: 1   MSRDRSSLFKKSRRLGFSVLENEKEFNKGKKRNYAPGQHGQ-RRTKLSDYGLHLYEKQKV 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG ++E++F + FK++ + +G    N + FLE RLD +VYRA F  T   ARQFVNH
Sbjct: 60  KNLYG-VNERQFANSFKKSSKLKGVQGTNFLQFLEQRLDNLVYRAGFAETRRQARQFVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            HVLV+G+ V+I SYR   G VIE+K+K ++ A VL   ++  R   +++SV   +  AT
Sbjct: 119 GHVLVDGKKVDIPSYRVAVGKVIEIKEKLQKNAQVLRNKEI--RTAADWLSV--KDFKAT 174

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           F R+P   + +     +  +L+VEFY++
Sbjct: 175 FTRLPERNEFLK---EVNDSLIVEFYNK 199


>gi|118626025|emb|CAL39329.1| small ribosomal protein 4 [Anastrophyllum minutum var. minutum]
 gi|118626049|emb|CAL39333.1| small ribosomal protein 4 [Anastrophyllum minutum]
          Length = 191

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTNKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIS 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|170784775|ref|YP_001718691.1| ribosomal protein S4 [Trachelium caeruleum]
 gi|156598820|gb|ABU85663.1| ribosomal protein S4 [Trachelium caeruleum]
 gi|157267523|gb|ABV26516.1| ribosomal protein S4 [Trachelium caeruleum]
          Length = 202

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 12/209 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G       +SP + R        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPCFKKIRRLGALPGLTNRSPDDLRKKK-----KSGSVKKSQYRIRLEEKQKLRF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 56  HYG-LTERQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---AERDVPEYISVNHDNMVA 177
           +LVNGR V+I SYRCK  D I  K K K  A +  +       +  VP ++++       
Sbjct: 115 ILVNGRLVDIPSYRCKPRDTITAKDKQKSKALIKNSLDSLPQKKLKVPPHLTLKRRQYKG 174

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  S +   + + +    VVE+YSR
Sbjct: 175 LVNKIIDSQR---FGLEINELRVVEYYSR 200


>gi|37992473|gb|AAR06415.1| small ribosomal protein 4 [Cryptopapillaria penicillata]
          Length = 196

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|20531115|gb|AAM27378.1| ribosomal protein 4 [Leiomela bartramioides]
          Length = 194

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPRARQLVNHRHILVNDHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++ ++P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPHDFITIKDRQKSQTIISKNIDFYQKYEIPNHLTYNSSENKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|3098204|gb|AAC15550.1| small ribosomal protein 4 [Splachnum luteum]
          Length = 198

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K  A + +  +  ++  +P ++  N         +I 
Sbjct: 117 EHIVDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQIL 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 177 DRQ---SIGLKINELLVVEYYSR 196


>gi|262038727|ref|ZP_06012087.1| ribosomal protein S4 [Leptotrichia goodfellowii F0264]
 gi|261747279|gb|EEY34758.1| ribosomal protein S4 [Leptotrichia goodfellowii F0264]
          Length = 195

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R+  P         K + +G Q+R KQK + 
Sbjct: 1   MARDRQPVLKKCRNLGLDPSVLGVNKKSNRNIRP-----NANRKLTEYGTQMREKQKARF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F  +++EA R  G T   L+ +LE RLD +VYR  F  T   ARQ V+H H
Sbjct: 56  VYG-VMEKQFYKLYEEATRKEGVTGELLLQYLERRLDNVVYRLGFGATRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L+NG+ VNI SYR K+GDVI +K+ S++LA + E+    ++ VP ++ ++   + A  +
Sbjct: 115 ILINGKRVNIASYRVKQGDVISIKENSRELALIKESV--GQKTVPGWLELDEAALTAKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P           +   +++EFYSR
Sbjct: 173 ENPGRD---SVDFEINEAMIIEFYSR 195


>gi|18920781|gb|AAL82435.1| ribosomal protein system 4 [Pseudotaxiphyllum elegans]
          Length = 197

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 58  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   
Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 175 LDRESIGLKINELLVVEYYSR 195


>gi|80974176|gb|ABB53781.1| small ribosomal subunit protein 4 [Ptychomnion falcatulum]
          Length = 197

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             VNI SYRCK  D I +K +      + +     ++  +P +++ +         +I  
Sbjct: 117 SIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNKI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|42556402|gb|AAS19796.1| small ribosomal protein 4 [Calypogeia integristipula]
          Length = 191

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKVLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I V++K K  + + +   + ++  +P +++ +   +     +  +      
Sbjct: 117 SYNCEPGDIITVREKQKSQSIITKNINVFQKLKIPSHLTFDSTELRGFVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|37548867|gb|AAO32702.1| ribosomal protein 4 [Pogonatum pensilvanicum]
          Length = 192

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 2   IRRLGALPGLTNKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ VN   V+I 
Sbjct: 58  KYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNSNLVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + + +      +  +P +++ + D +  +  +    +    
Sbjct: 118 SYDCEPGDIITIKNKQKSQSIISKNLBSFKKSKIPSHLTFDSDTIQGSVNQ---RVNREW 174

Query: 191 YPVIMQPNLVVEFYSR 206
             +I+   LVVE+YSR
Sbjct: 175 VNLIINELLVVEYYSR 190


>gi|77019199|emb|CAH60205.1| chloroplast 30S ribosomal protein S4 [Grimmia pulvinata]
          Length = 195

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  + +++    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DHESIGLKINELLVVEYYSR 193


>gi|32471308|ref|NP_864301.1| 30S ribosomal protein S4 [Rhodopirellula baltica SH 1]
 gi|32443149|emb|CAD71980.1| 30S ribosomal protein S4 [Rhodopirellula baltica SH 1]
 gi|327541734|gb|EGF28253.1| 30S ribosomal protein S4 [Rhodopirellula baltica WH47]
          Length = 206

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++    K +I+RR+G  L+        ++ R   PG+H + R+  PS +G  L  KQK+
Sbjct: 5   MARYTGPKARINRRLGTMLYETAGAARAMDRRPQPPGMHTRGRR--PSNYGAALMEKQKI 62

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K YYG + E++ R  F+   R  G+T   L+   E RLD +V R  F  T   ARQ + H
Sbjct: 63  KHYYG-LGERQLRRYFENVGRKSGNTGELLLLMCERRLDNVVRRVGFTKTRPQARQGITH 121

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  VNG  V    Y  + GD+IEV+ +             +  D  +++S + + + AT
Sbjct: 122 GHFRVNGVKVTKPGYMLRAGDLIEVRGRENLKNLYRGVIANSPPDGLDWVSFDSETLRAT 181

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + +P ++ D+  PV      VVEF SR
Sbjct: 182 VLSLPGAV-DISLPVDANS--VVEFLSR 206


>gi|255994833|ref|ZP_05427968.1| ribosomal protein S4 [Eubacterium saphenum ATCC 49989]
 gi|255993546|gb|EEU03635.1| ribosomal protein S4 [Eubacterium saphenum ATCC 49989]
          Length = 195

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 15/208 (7%)

Query: 1   MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+   S   K  R +  +    G  K     +        Q    K S + LQLR KQ+ 
Sbjct: 1   MAVDRSPVLKRCRSLDLDPVHIGTMKKSKRMK--------QGYGKKMSEYALQLREKQRA 52

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I EK+FR+ + +A R +G T  N +  LE RLD+IVYR  F  T   ARQ V H
Sbjct: 53  KFIYG-ILEKQFRNTYNKAARKKGITGENFLVMLEMRLDSIVYRMGFATTRREARQLVTH 111

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H LVNG+ +NI S   K GDVI+VK KS       E  Q+    +PE++ V+ D +   
Sbjct: 112 GHFLVNGKKLNIPSAELKVGDVIKVKNKSVSSPKFEEIRQM-RVGIPEWLEVSKDKLEGK 170

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V IP+  +       ++ +L+VEFYS+
Sbjct: 171 VVSIPTREQ---IDTPIEEHLIVEFYSK 195


>gi|146261579|gb|ABQ15099.1| ribosomal protein S4 [Peridiscus lucidus]
          Length = 191

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   KIRRLGALPGLTSKRP----RTGSDLRKQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I
Sbjct: 56  LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRIVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D+I  +   K  A +      +   ++P++++++         +I  S    
Sbjct: 116 PSYRCKPQDIITARDDQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK--- 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 WVNLKINELLVVEYYSR 189


>gi|78369617|gb|ABB43038.1| ribosomal protein 4 [Leucophanes octoblepharioides]
          Length = 199

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY+CK  D I +K + K    +++    + +  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYQCKSQDFITIKDQQKYQTMIVKNRSFSPKYKIPSHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|42794658|gb|AAS45726.1| Rps4 [Macleania bullata]
          Length = 211

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+ L          L +     + VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRXRKRKRVPXHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|28572545|ref|NP_789325.1| 30S ribosomal protein S4 [Tropheryma whipplei TW08/27]
 gi|161486575|ref|NP_787506.2| 30S ribosomal protein S4 [Tropheryma whipplei str. Twist]
 gi|41017835|sp|Q83GC9|RS4_TROWT RecName: Full=30S ribosomal protein S4
 gi|41017836|sp|Q83HV1|RS4_TROW8 RecName: Full=30S ribosomal protein S4
 gi|28410677|emb|CAD67063.1| 30s ribosomal protein S4 [Tropheryma whipplei TW08/27]
          Length = 205

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           S+ ++ R +G  L  +    +  R Y PG HG+ R+   S + ++LR KQ+++  YG + 
Sbjct: 5   SRTRLSRALGVPLTPKAARLMEVRPYPPGQHGRFRRKGDSDYAVRLREKQRLRGQYG-LR 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+  S++ EA R +G    NL+  LE RLD +V RA F  +I  ARQ V HRH+LV+G+
Sbjct: 64  EKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVVHRHILVDGK 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATFVRI 182
            V+  SY    G  ++VK KS  L     A+     DV    P YI  + + +    VR 
Sbjct: 124 LVDRPSYSVSPGQTVKVKPKSVPLDPFQVAASGGHADVLPPIPGYIEADLEGLSFRLVRR 183

Query: 183 PSSLKDVPYPVIMQPNLVVEFY 204
           P   +    PV     LVVE+Y
Sbjct: 184 PKRSE---VPVTCNVQLVVEYY 202


>gi|254449317|ref|ZP_05062762.1| ribosomal protein S4 [gamma proteobacterium HTCC5015]
 gi|198261076|gb|EDY85376.1| ribosomal protein S4 [gamma proteobacterium HTCC5015]
          Length = 173

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/174 (37%), Positives = 106/174 (60%), Gaps = 6/174 (3%)

Query: 34  PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93
           PG   Q R+ + S +GLQLR KQK+++ YG + E++FR+ +K A R +G T  NL+  LE
Sbjct: 5   PGQ-AQARRGRLSDYGLQLREKQKVRRIYGVL-ERQFRNYYKTAARQKGSTGENLLKLLE 62

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD +VYR  +  T   ARQ V+H+ +LVNG  VN+ SY+ K GD ++V+++S Q   +
Sbjct: 63  CRLDNVVYRMGYGSTRAEARQLVSHKAILVNGAVVNVASYQVKAGDEVKVREQSAQQTRI 122

Query: 154 LEASQLAERDVP-EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +LA++  P E++ V+   +   F  +P        P  +  +L+VE YS+
Sbjct: 123 QDSMELAQQRGPVEWMEVDTKKLSGVFKNVPDRSD---LPAEINESLIVELYSK 173


>gi|18920729|gb|AAL82409.1| ribosomal protein system 4 [Amblystegium fluviatile]
          Length = 197

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|63101095|gb|AAY33172.1| small ribosomal protein 4 [Cardotiella subappendiculata]
          Length = 197

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNH 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +K + K    + +     ++  +P ++  N         +I  
Sbjct: 117 RIVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLIYNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRELIGLKINELLVVEYYSR 195


>gi|157689456|gb|ABV65284.1| ribosomal protein S4 [Crossosoma californicum]
          Length = 193

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RSVSDLRNQARPVKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V
Sbjct: 56  QLLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  + + K    +      +   ++P+++++          +I  S  
Sbjct: 116 DIPSYRCKPQDIITARNEQKSRTLIKNYLDSSPHEELPKHLTLRPFQYKGLVNQIIDSK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVGLKINELLVVEYYSR 191


>gi|157887720|emb|CAM33382.1| ribosomal protein S4 [Leptodontium gemmascens]
          Length = 196

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    +     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K  + + +    +++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDCITINDRKKSQSIITKNIDFSQKSKIPHHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|157786002|gb|ABV74173.1| small ribosomal protein 4 [Lopidium concinnum]
          Length = 198

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 7/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       KS    +     ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-I 57

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG
Sbjct: 58  TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNG 117

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K K K  + + +  +  ++  +  +++ +         +I  
Sbjct: 118 YIVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI-- 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 176 -LDRESIGLKINELLVVEYYSR 196


>gi|157785989|gb|ABV74168.1| small ribosomal protein 4 [Hypopterygium tamarisci]
 gi|157785991|gb|ABV74169.1| small ribosomal protein 4 [Hypopterygium tamarisci]
          Length = 197

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG
Sbjct: 57  TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNG 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I  
Sbjct: 117 YIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LNRESIGLKINELLVVEYYSR 195


>gi|83416506|gb|ABC18273.1| small ribosomal subunit protein 4 [Ctenidium molluscum]
          Length = 196

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|63078609|gb|AAY29391.1| ribosomal protein S4 [Pseudosymblepharis richardsii]
          Length = 197

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S            K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A + +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKVKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K    + +     ++  +P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGIVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQELIGLKINELLVVEYYSR 195


>gi|28194717|gb|AAO33620.1|AF480975_1 ribosomal protein S4 [Cinclidotus fontinaloides]
          Length = 196

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +  + +++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRQKSQVMITKNVEFSQKSKIPNHLTFNFLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|66990674|emb|CAI29115.1| small ribosomal protein 4 [Plagiochila colorans]
          Length = 195

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N
Sbjct: 57  LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY C+ G++I +  K K  + V +     ++  +P +++ +   +  +  ++ 
Sbjct: 117 NDIVDIPSYNCEPGNIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMI 176

Query: 184 SSLKDVPYPVIMQPNLVVEF 203
                    + +   LVVE+
Sbjct: 177 DR---ESINLKINEXLVVEY 193


>gi|78369627|gb|ABB43043.1| ribosomal protein 4 [Calymperes robinsonii]
          Length = 199

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+
Sbjct: 58  -LTERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRI 182
           N R VNI SY+CK  D I +K + K    +++   +  +  +P +++ N         +I
Sbjct: 117 NNRIVNIPSYQCKPQDFITLKDQQKYQTMIVKNINVYPKYKIPSHLTFNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|28194709|gb|AAO33616.1|AF480971_1 ribosomal protein S4 [Phascum curvicolle]
          Length = 196

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    +     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSNST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|17025818|gb|AAL32076.1| ribosomal protein 4 [Syrrhopodon albovaginatus]
 gi|17025826|gb|AAL32080.1| ribosomal protein 4 [Syrrhopodon prolifer]
          Length = 199

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 KI RR+G       K+     S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPCVKIIRRLGTLSGLTNKTHQLKSSS---INQLTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRI 182
           N R VNI SY+CK  D I +K   K    +L+     ++   P ++  N         +I
Sbjct: 117 NNRIVNIPSYQCKPQDFITLKDHQKYQTRILKNINFFSKHKTPNHLIFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|121761732|gb|ABM64953.1| ribosomal protein S4 [Plagiomnium venustum]
 gi|121761783|gb|ABM64978.1| ribosomal protein S4 [Plagiomnium venustum]
 gi|121761789|gb|ABM64981.1| ribosomal protein S4 [Plagiomnium venustum]
          Length = 195

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|157689472|gb|ABV65292.1| ribosomal protein S4 [Eucryphia lucida]
          Length = 193

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RTGSDFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKCVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  K + K  A +       A  ++ ++++++         +I  S  
Sbjct: 116 DIPSYRCKPRDIITAKDEQKSRALIQNYLDSSAHEELSKHLTLHPVQYKGLVNQIIDSK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVGLKINELLVVEYYSR 191


>gi|12642240|gb|AAK00202.1| rps4 [Gigaspermum repens]
          Length = 194

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGVLPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T    +  LE RLD +++R     TI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVSLQLLEMRLDNVIFRLGMALTIPEARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +    +++  VP +++ N         +    L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQX---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|78369633|gb|ABB43046.1| ribosomal protein 4 [Calymperes motleyi]
          Length = 199

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKILRRLGTLSGLSNKTPPLK---ASSINQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY CK  D I +K + K    +++ +    +   P ++  N         +I
Sbjct: 117 NNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFPKYKTPNHLIFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|269122554|ref|YP_003310731.1| ribosomal protein S4 [Sebaldella termitidis ATCC 33386]
 gi|268616432|gb|ACZ10800.1| ribosomal protein S4 [Sebaldella termitidis ATCC 33386]
          Length = 195

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R   P         K + +G+QLR KQK + 
Sbjct: 1   MARDRQPVLKKCRTLGLDPSILGVNKKSKRGLRP-----NANKKLTDYGIQLREKQKARF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I EK+F  +++EA R  G T   L+ +LE R D +VYR     T   ARQ V+H H
Sbjct: 56  VYG-IMEKQFYKLYEEATRKEGVTGELLLQYLERRFDNVVYRLGLTTTRRQARQLVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + +NG+ VNI SYR K+GDVI V++KS+ LA + E+    ++ VP +++++ + + A  +
Sbjct: 115 LEINGKRVNIASYRVKQGDVITVREKSRDLAIIKESLN--QKSVPGWLTLDENALSAKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P+          +   +++EFYSR
Sbjct: 173 ENPTR---EAVDFDINEAMIIEFYSR 195


>gi|18920795|gb|AAL82442.1| ribosomal protein system 4 [Taxiphyllum taxirameum]
          Length = 196

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P   R     ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTP---RLKSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + E  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIINENIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|67035654|gb|AAY62758.1| small ribosomal protein subunit 4 [Jonesiobryum cerradense]
          Length = 194

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K           ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGILPGLTNKISQLKSGS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    +++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQTMIIKNLDFSQKTKVPNHLTFNFSZKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|118625997|emb|CAL41736.1| small ribosomal protein 4 [Riccardia capensis]
          Length = 202

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       + P +  S    +       K S + L+L  KQK++ 
Sbjct: 1   MSRYRGPRTKIIRRLGTLPGLTSRIPKSRSSS---IDRSAANKKISQYRLRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++G T   L+  LE RLD  ++R   VPTI AARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVCVAKKAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATF 179
           VL+N   VNI SY CK GD+I +K + +    +  +   + +  +P +++        + 
Sbjct: 117 VLINANMVNIPSYNCKTGDIITIKARERNRLKMGSDTISIQKTGIPNHLAFKSVEFSGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI          + +   LVVE+YSR
Sbjct: 177 NRIIDR---EGIDLKINELLVVEYYSR 200


>gi|227345129|gb|ACP28117.1| small ribosomal protein 4 [Chiloscyphus spinifer]
          Length = 191

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLSSKTLKPKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRDKDKSQSMITKNINLFQKLKIPSHLTFDSIKLQGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|170321467|gb|AAY62815.2| small ribosomal protein subunit 4 [Orthodontopsis bardunovii]
          Length = 203

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++    + +I RR+G       K      S    ++      K S + ++L  KQK++ +
Sbjct: 3   ARYRGPRVRIIRRLGALPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFH 59

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNH+H+
Sbjct: 60  YG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMASTIPGARQLVNHKHI 118

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           LVN R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         
Sbjct: 119 LVNDRIVDIPSYRCKPQDFITIKDRQKSQAIIDKNLDFYQKSKIPNHLTYNSLEKKGLVN 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I   L      + +     VE+YSR
Sbjct: 179 QI---LXRESJGLKINELXXVEYYSR 201


>gi|24473808|gb|AAL82747.1| small ribosomal subunit protein 4 [Acidodontium sprucei]
          Length = 199

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPCVRIIRRLGALRGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I
Sbjct: 117 NDRIVNIPSYRCKPEDFITIKNRQKSQAIISKNLNLHQKYKTPNHLTYNFLKKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|28194697|gb|AAO33610.1|AF480965_1 ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078581|gb|AAY29377.1| ribosomal protein S4 [Pleurochaete luteola]
 gi|63078583|gb|AAY29378.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078603|gb|AAY29388.1| ribosomal protein S4 [Pleurochaete squarrosa]
          Length = 196

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|28194689|gb|AAO33606.1|AF480961_1 ribosomal protein S4 [Pottiopsis caespitosa]
          Length = 196

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---INQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|63191881|gb|AAY34900.1| small ribosomal protein subunit 4 [Hyophiladelphus agrarius]
          Length = 194

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S+    +      K S + ++L  KQK++ YYG I+E+
Sbjct: 1   VKIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFYYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESVGLKINELLVVEYYSR 192


>gi|237744174|ref|ZP_04574655.1| SSU ribosomal protein S4P [Fusobacterium sp. 7_1]
 gi|256027711|ref|ZP_05441545.1| 30S ribosomal protein S4 [Fusobacterium sp. D11]
 gi|260494240|ref|ZP_05814371.1| ribosomal protein S4 [Fusobacterium sp. 3_1_33]
 gi|289765670|ref|ZP_06525048.1| SSU ribosomal protein S4P [Fusobacterium sp. D11]
 gi|229431403|gb|EEO41615.1| SSU ribosomal protein S4P [Fusobacterium sp. 7_1]
 gi|260198386|gb|EEW95902.1| ribosomal protein S4 [Fusobacterium sp. 3_1_33]
 gi|289717225|gb|EFD81237.1| SSU ribosomal protein S4P [Fusobacterium sp. D11]
          Length = 195

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +         + R   P         KP+ +  QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRNLGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI S+R K GD++ V + SK +  +  A + A    P ++ ++        +
Sbjct: 115 IAVNGRRVNIASFRVKVGDIVSVIENSKNVELIKSAVEDA--TPPAWLELDRAAFSGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|37960593|gb|AAP70666.1| small ribosomal protein 4 [Sphagnum lescurii]
          Length = 191

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P +  +Y   ++      K S + ++L  KQK++ +YG I+E++   
Sbjct: 2   RRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI S
Sbjct: 58  YVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +  +   +     P +++++      +  +I         
Sbjct: 118 YRCKPQDFISIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 GLKINELLVVEYYSR 189


>gi|11878074|gb|AAG40785.1| small ribosomal protein 4 [Takakia sp. LSU-47]
          Length = 192

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+G +     K+P +   Y   ++      K S + ++L  KQK++ ++G ++E++ 
Sbjct: 1   VIRRLGASPGLTNKTPQSKSGY---INQSTSNKKISQYRIRLEEKQKLRFHHG-VTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN R+VNI
Sbjct: 57  LKYVRIARRAKGSTGQVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRTVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            S+RCK  D I  K + K  A + +    +++ ++P ++++N         +I       
Sbjct: 117 PSFRCKPQDFITTKDRQKSQAVITKNMDCSQKSEMPNHLTLNSSQKRGLVNQIIDR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|20531088|gb|AAM27365.1| ribosomal protein 4 [Diphyscium fasciculatum]
          Length = 194

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    V++    +++  +P +++++         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQDIVVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +    VVE+YSR
Sbjct: 174 RESIGLKINELFVVEYYSR 192


>gi|229820502|ref|YP_002882028.1| ribosomal protein S4 [Beutenbergia cavernae DSM 12333]
 gi|259495269|sp|C5C5S5|RS4_BEUC1 RecName: Full=30S ribosomal protein S4
 gi|229566415|gb|ACQ80266.1| ribosomal protein S4 [Beutenbergia cavernae DSM 12333]
          Length = 208

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 110/202 (54%), Gaps = 8/202 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ R +G  L  +       R Y PG HG+ R+   S + ++L+ KQ+++  YG I E 
Sbjct: 11  VRLSRALGLPLTPKAAKYFEKRPYPPGEHGRARRRTESDYAVRLKEKQRLRAQYG-IREA 69

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R  F EA R  G T   L+  LE RLD +V R+ F  TI  ARQ V HRHVLV+G+ V
Sbjct: 70  QLRRAFDEARREAGLTGEALVELLEMRLDALVLRSGFARTIAQARQAVVHRHVLVDGKIV 129

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPS 184
           +  S+R K G VI+VK +S+       A+  A RD    VPEY+ V+ + + +  VR P 
Sbjct: 130 DRPSFRVKPGQVIQVKPRSQARTPFQVAAAGAHRDVLAQVPEYLDVSLEKLRSELVRRPK 189

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV     L+VE+Y+R
Sbjct: 190 RAE---VPVTADVQLIVEWYAR 208


>gi|42556464|gb|AAS19827.1| small ribosomal protein 4 [Neotrichocolea bissetii]
          Length = 191

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +VNI 
Sbjct: 57  KYVCIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + +     L ++  +P +++ +   +  +  ++        
Sbjct: 117 SYNCEPGDIITIRNKEKSQSIITRNINLFQKLKIPNHLTFDSTQLRGSVNQMIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IHLKINELLVVEYYSR 189


>gi|63191653|gb|AAY34788.1| small ribosomal protein subunit 4 [Rhytidium rugosum]
 gi|63191655|gb|AAY34789.1| small ribosomal protein subunit 4 [Dimerodontium balansae]
          Length = 195

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|80974180|gb|ABB53783.1| small ribosomal subunit protein 4 [Ptychomnion subaciculare]
          Length = 197

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             VNI SYRCK  D I +K +      + +     ++  +P +++ +         +I  
Sbjct: 117 SIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNKI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|37548879|gb|AAO32708.1| ribosomal protein 4 [Polytrichastrum longisetum]
          Length = 194

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 2   KIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VN
Sbjct: 58  LLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVN 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L  
Sbjct: 118 IPSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDR 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 ESIGLKINELLVVEYYSR 192


>gi|18920745|gb|AAL82417.1| ribosomal protein system 4 [Isopterygiopsis muelleriana]
          Length = 196

 Score =  167 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQSPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIDFYQKYKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|63191773|gb|AAY34846.1| small ribosomal protein subunit 4 [Polytrichastrum alpinum]
          Length = 194

 Score =  167 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 57  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A +      ++   +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESINLKINELLVVEYYSR 192


>gi|28194693|gb|AAO33608.1|AF480963_1 ribosomal protein S4 [Anoectangium aestivum]
          Length = 196

 Score =  167 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSEVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|18920769|gb|AAL82429.1| ribosomal protein system 4 [Plagiothecium denticulatum]
          Length = 197

 Score =  167 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 58  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   
Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 175 LDRESIGLKINELLVVEYYSR 195


>gi|67035893|gb|AAY62873.1| small ribosomal protein subunit 4 [Trachyphyllum gastrodes]
          Length = 198

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I  R+G       K+P         ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIICRLGTLPGLTNKTPQLESGS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSSEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   L+VZ+YSR
Sbjct: 176 --LDRESIGLKINELLIVZYYSR 196


>gi|42556418|gb|AAS19804.1| small ribosomal protein 4 [Gymnomitrion sp. 1989 Parnela]
          Length = 191

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTFKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN   V+I 
Sbjct: 57  KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISVNNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYSCELGDIITVKSKQKSQSIITKNVNLFQKLKIPGHLTFDSIELRGSVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|42556454|gb|AAS19822.1| small ribosomal protein 4 [Makinoa sp. He-Nygren 1295]
          Length = 190

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 9/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P +      G   Q    K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   MRRLGALPGLTNKIPKSK----SGFTNQASNKKLSQYRIRLEEKQKLRFHYG-LTERQLL 55

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A R++G T   L+  LE RLD I++R    PTI +ARQ VNHRH+LVN   V+I 
Sbjct: 56  KYVCIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPSARQLVNHRHILVNNYPVDIP 115

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+  +VI ++   K  + +++   L++   VP ++  +      +  ++        
Sbjct: 116 SYNCEPENVISIRDPKKSRSIIIKNRDLSQGAKVPNHLIFDSTQFRGSVNQMIDRD---W 172

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   L+VE+YSR
Sbjct: 173 INLKINELLIVEYYSR 188


>gi|12642256|gb|AAK00210.1| rps4 [Splachnobryum obtusum]
          Length = 194

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G  L G     +N +S         +K   S + ++L  KQK++ +YG I+E+
Sbjct: 1   CKIIRRLGT-LPGLSNKTLNLKSSFTNQSSSNKK--ISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNH+H+LVN R V
Sbjct: 57  QLLNYVRIARKTKGSTGQILLQLLEMRLDNVLFRLGMATTIPGARQLVNHKHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +     ++  +P ++  N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQIMITKNVDFFQKSKIPSHLIFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|93213400|gb|ABF01126.1| ribosomal protein subunit 4 [Crossomitrium patrisiae]
          Length = 199

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K      S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH++V
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K K K    + +  +  ++  +P +++ N         +I
Sbjct: 117 NDFLVDIPSYRCKSQDFITIKNKKKSKTIISKNIEFYQKSKIPNHLTYNFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIDLKINELLVVEYYSR 197


>gi|17025824|gb|AAL32079.1| ribosomal protein 4 [Leucophanes seychellarum]
          Length = 199

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K+P         ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKILRRLGTLSGLSNKTPQLK---ASSINQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY CK  D I +K + K    +++ +    +   P ++  N         +I
Sbjct: 117 NNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFPKYKTPNHLIFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|28194749|gb|AAO33636.1|AF480991_1 ribosomal protein S4 [Geheebia gigantea]
          Length = 196

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    +     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSNST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|67036026|gb|AAY62939.1| small ribosomal protein subunit 4 [Aerolindigia capillacea]
          Length = 197

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D + +K K K    + +  +L ++  +P +++ +         +I  
Sbjct: 117 CIVDIPSYRCKPQDFVTIKNKRKSENIISKNMELYQKYKIPNHLTYSFLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|121761884|gb|ABM65027.1| ribosomal protein S4 [Plagiomnium tezukae]
          Length = 195

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|37960595|gb|AAP70667.1| small ribosomal protein 4 [Sphagnum perichaetiale]
          Length = 195

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +  +Y   ++      K S + ++L  KQK++ +YG I+ +
Sbjct: 2   VRILRRLGVLPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITXR 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   +     P +++++      +  +I     
Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|28194663|gb|AAO33593.1|AF480948_1 ribosomal protein S4 [Hyophila involuta]
          Length = 195

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S+    +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKTPHLKSSFT---NQSSSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYIRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|18920737|gb|AAL82413.1| ribosomal protein system 4 [Herzogiella adscendens]
          Length = 196

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLRSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|63101085|gb|AAY33167.1| small ribosomal protein 4 [Stenodesmus tenuicuspis]
          Length = 199

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G  L G     +  +S         +K   S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGV-LPGLTNKILELKSSSITQSISNKK--ISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRHV+V
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVVV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K    + +  +  ++  +P Y++ N         +I
Sbjct: 117 NDSIVDIPSYRCKPQDFITIKNQKKYEVIISKNIEFYQKSKIPNYLTYNFVEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|63101099|gb|AAY33174.1| small ribosomal protein 4 [Jaffueliobryum latifolium]
 gi|67035692|gb|AAY62777.1| small ribosomal protein subunit 4 [Indusiella thianschanica]
 gi|322719581|gb|ADX07727.1| small ribosomal protein subunit 4 [Indusiella thianschanica]
          Length = 194

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A V++    +++D VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQKDKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 HGSIGLKINELLVVEYYSR 192


>gi|48527385|gb|AAT45825.1| small ribosomal protein 4 [Plagiochila lastii]
          Length = 195

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTVKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  + K  ++V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNEQKSRSAVTKNVNSFQKLKIPSHLTFDSTQLQRSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVV 201
            ++ +        + +   LVV
Sbjct: 177 NQMINR---EWITLKINEVLVV 195


>gi|75858248|gb|ABA28698.1| small ribosomal protein 4 [Wettsteinia schusteriana]
          Length = 191

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTFKSKSSY---VDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ VN   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISVNNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ G++I +K K K  + + +   L +   +P +++ +   ++    +  +      
Sbjct: 117 SYNCEPGNIITIKNKRKSQSIITKNINLFQNLKIPSHLTFDSIQLLGFVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|548865|sp|P36456|RR4_ELEIN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|439938|emb|CAA82436.1| ribosomal protein S4 [Eleusine indica]
          Length = 196

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKKKFYSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +++  T   L+  LE RLD IV+R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKKSTGQVLLQLLEMRLDNIVFRLGMASTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVNGR V+I S+RCK  D+I  K   +    V  +    +   +P++++V+        
Sbjct: 116 ILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASFDPGRLPKHLTVDTLQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I          + +   L VE+
Sbjct: 176 QKILDRK---WVGLKINELLFVEY 196


>gi|125662694|gb|ABN50297.1| small ribosomal protein 4 [Keteleeria davidiana var. calcarea]
          Length = 196

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 9/202 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+        K P     Y      +    K S + ++L  KQK++ +YG +
Sbjct: 1   GPRLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN 
Sbjct: 56  TERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVND 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184
             V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ N         +I  
Sbjct: 116 HMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFNSLQYKGFINQIID 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           S       + +   LVVE+YSR
Sbjct: 176 SK---WISLKINELLVVEYYSR 194


>gi|49182679|gb|AAT57802.1| small ribosomal protein [Blasia pusilla]
          Length = 195

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR G       K   +   Y   L+      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRXGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N  +
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNIN 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK  D+I +K + K  + + +     ++  +P +++ +         +I    
Sbjct: 117 VDIPSYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQIIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKINELLVVEYYSR 193


>gi|315655401|ref|ZP_07908301.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 51333]
 gi|315490341|gb|EFU79966.1| 30S ribosomal protein S4 [Mobiluncus curtisii ATCC 51333]
          Length = 206

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  R     ++ R +G  L  + K     R YGPG HG+ R+   S + ++L+ KQ+++ 
Sbjct: 1   MGNRSRKMVRLSRALGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  I E +    F+EA R  G T  NL+  LE RLD +V RA F  T+F ARQ V HRH
Sbjct: 61  QYA-IREAQLVKTFQEARRMEGQTGDNLVELLEMRLDALVLRAGFGRTMFQARQAVTHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176
           +LV+G+ V+  SY+ + G  ++VK  S+     + A++ + RD    VP+Y+ V+ + + 
Sbjct: 120 ILVDGKIVDRPSYKVRPGQTVQVKPTSQVKDPFVVAARGSHRDVLPPVPDYLKVDLEKLR 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T  R P   +    P+  +  LVVE YSR
Sbjct: 180 FTLERKPKREE---VPIQCEVQLVVEHYSR 206


>gi|218157233|gb|ACK58433.1| ribosomal protein subunit 4 [Psilopilum cavifolium]
          Length = 192

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI
Sbjct: 57  LNYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|49182758|gb|AAT57841.1| small ribosomal protein [Mastigophora diclados]
          Length = 188

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+     SY   +       K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGTLPGLTSKTLKPKSSY---IDRSSSTKKVSQYRIRLEEKQKLRFHYG-LTEQQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY 
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHISINNDIVDIPSYN 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           C+ G++I +K K K  + + +   L ++  +P +++ +   +  +  +I +        +
Sbjct: 117 CEPGNIITIKNKQKSQSIITKNINLFQKLKIPSHLTFDSTKLRGSINQIINR---EWINL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37960611|gb|AAP70675.1| small ribosomal protein 4 [Sphagnum strictum]
          Length = 191

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E++   
Sbjct: 2   RRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI S
Sbjct: 58  YVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +  +         P +++++      +  +I         
Sbjct: 118 YRCKPQDFITIKDRQKSQAIITRSMDYFRGYKTPNHLTLDSSQKKGSVNQIIDR---ESI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 GLKINELLVVEYYSR 189


>gi|67035670|gb|AAY62766.1| small ribosomal protein subunit 4 [Campylopus introflexus]
          Length = 194

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+     +    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  + +    + +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 HESIGLNINELLVVEYYSR 192


>gi|328541052|gb|AEB21750.1| ribosomal protein S4 [Lembidium nutans]
          Length = 195

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K       Y           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE R D  + R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVSLQLLEMRPDNTILRLGMASTIPGARQLVNHRHIPINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +++K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ESIDLKINELLVVEYYSR 193


>gi|75858228|gb|ABA28688.1| small ribosomal protein 4 [Brevianthus flavus]
          Length = 191

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+          +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTL---EPKSSSIDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARRAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C  GD I ++ K K  + + +   L ++  VP +++ +   +  +  ++ +      
Sbjct: 117 SYNCGPGDSITIRNKQKSQSIITKNINLFQKLKVPSHLTFDSTQLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|67035964|gb|AAY62908.1| small ribosomal protein subunit 4 [Taiwanobryum speciosum]
          Length = 196

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDLITIKDQRKSETIISKNMEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|304389439|ref|ZP_07371402.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315656686|ref|ZP_07909573.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|304327249|gb|EFL94484.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315492641|gb|EFU82245.1| 30S ribosomal protein S4 [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 206

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  R     ++ R +G  L  + K     R YGPG HG+ R+   S + ++L+ KQ+++ 
Sbjct: 1   MGNRSRKMVRLSRALGMPLTPKAKRYFERRPYGPGEHGRARRRSESDYAVRLKEKQRLRA 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  I E +    F+EA R  G T  NL+  LE RLD +V RA F  T+F ARQ V HRH
Sbjct: 61  QYA-IREAQLVKTFQEARRMEGQTGDNLVELLEMRLDALVLRAGFGRTMFQARQAVTHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMV 176
           +LV+G+ V+  SY+ + G  +++K  S+     + A++ + RD    VP+Y+ V+ + + 
Sbjct: 120 ILVDGKIVDRPSYKVRPGQTVQIKPTSQVKDPFVVAARGSHRDVLPPVPDYLKVDLEKLR 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            T  R P   +    P+  +  LVVE YSR
Sbjct: 180 FTLERKPKREE---VPIQCEVQLVVEHYSR 206


>gi|28194721|gb|AAO33622.1|AF480977_1 ribosomal protein S4 [Trichostomum crispulum]
          Length = 196

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNS 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVIITKNVDFSQKYKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|293634027|gb|ADE60393.1| ribosomal protein subunit 4 [Pogonatum belangeri]
 gi|293634061|gb|ADE60410.1| ribosomal protein subunit 4 [Pogonatum usambaricum]
          Length = 192

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI
Sbjct: 57  LNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFIIIKNRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SISLKINELLVVEYYSR 190


>gi|37960579|gb|AAP70659.1| small ribosomal protein 4 [Sphagnum compactum]
          Length = 193

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 2   ILRRLGVLPGLTNKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI
Sbjct: 58  LKYVRIARRAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A +  +   +     P +++++      +  +I       
Sbjct: 118 PSYRCKPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---E 174

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 175 SIGLKINELLVVEYYSR 191


>gi|80974162|gb|ABB53774.1| small ribosomal subunit protein 4 [Glyphothecium sciuroides]
          Length = 198

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +K +      + +     ++  +P +++ +         +I 
Sbjct: 117 DCIVNIPSYRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|12642238|gb|AAK00201.1| rps4 [Gigaspermum repens]
          Length = 192

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 2   IRRLGVLPGLTNKTPXLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V+I 
Sbjct: 58  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPEARQLVNHRHILVNDCMVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +    +++  VP +++ N         +I   L    
Sbjct: 118 SYRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI---LDRES 174

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 175 IGLKINELLVVEYYSR 190


>gi|17025847|gb|AAL32089.1| ribosomal protein 4 [Mitthyridium sp. Wall 3652]
          Length = 199

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGLRVKIIRRLGILSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++ ++  ++   P +++ N         +I
Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFFSKHKTPNHLTFNSVEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|227549867|ref|ZP_03979916.1| 30S ribosomal protein S4 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078122|gb|EEI16085.1| 30S ribosomal protein S4 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 178

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/182 (37%), Positives = 100/182 (54%), Gaps = 6/182 (3%)

Query: 26  PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
               R Y PG  G+ R  +  Y  LQL+ KQK +  YG + EK+FR  ++EA+R  G T 
Sbjct: 2   SFERRPYPPGQAGRARIKESEYL-LQLQEKQKARFIYG-VMEKQFRRYYEEANRLPGKTG 59

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            NL+  LESRLD +VYRA    T   ARQ V+H H  VNG+  N+ SYR    D+I+V++
Sbjct: 60  DNLLVLLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKRTNVPSYRVSRYDIIDVRE 119

Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           KS+ +    EA   L +  VP ++ V  + +     ++P   +     V +Q  L+VE Y
Sbjct: 120 KSRAMIWFEEAQDNLVDSVVPAWLQVVPETLRILVHQLPERAQ---IDVPLQEQLIVELY 176

Query: 205 SR 206
           S+
Sbjct: 177 SK 178


>gi|28194691|gb|AAO33607.1|AF480962_1 ribosomal protein S4 [Aschisma carniolicum]
          Length = 196

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SY CK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYSCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|18920727|gb|AAL82408.1| ribosomal protein system 4 [Acrocladium auriculatum]
          Length = 195

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|149126893|gb|ABR20460.1| small ribosomal protein [Trichocoleopsis sacculata]
          Length = 191

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +VNI 
Sbjct: 57  KYVCIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNETVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + +     L ++  +P +++ +   +  +  ++        
Sbjct: 117 SYNCEPGDIITIRNKEKSQSIITRNMNLFQKLKIPNHLTFDSTQLRGSVNQMIQR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IYLKINELLVVEYYSR 189


>gi|24473850|gb|AAL82769.1| small ribosomal subunit protein 4 [Brachymenium nepalense]
          Length = 196

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|67035722|gb|AAY62792.1| small ribosomal protein subunit 4 [Octoblepharum albidum]
          Length = 200

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 7/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K  RR+G       K+    +S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRIKKIRRLGILPGLTNKTISQLKSSS--NNQSISNKKVSQYRIRLEEKQKLRFHYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A +++G T   L+  LE RLD +++R    PTI AARQ VNHR++LV
Sbjct: 59  -LTEQQLLNYMRVARKTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPAARQLVNHRYILV 117

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  DVI +K +      +++  +  ++  +P ++S N         +I
Sbjct: 118 NNCIVNIPSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKYKIPNHLSFNALEKKGLVKQI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 178 ---LDQEFVGLKINELLVVEYYSR 198


>gi|157785995|gb|ABV74170.1| small ribosomal protein 4 [Hypopterygium tamarisci]
          Length = 197

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG
Sbjct: 57  TERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNG 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I  
Sbjct: 117 YIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LNRESIGLKINELLVVEYYSR 195


>gi|37992563|gb|AAR06460.1| small ribosomal protein 4 [Isothecium myosuroides]
          Length = 195

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42556436|gb|AAS19813.1| small ribosomal protein 4 [Jungermannia leiantha]
          Length = 191

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKVLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCELGDIIAVKNKQKSQSIITKNINLFQKSKIPSHLTFDSAKLHGSVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VHLKINELLVVEYYSR 189


>gi|92417447|gb|ABE76819.1| ribosomal protein subunit 4 [Metzgeria furcata]
          Length = 198

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI R +G       K+  +  SY   +       K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRTKIIRXLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N
Sbjct: 57  LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATFVRIP 183
              V+I SY C+ GD+I +K + +  + ++E  + L +  +P +++ +    + +  ++ 
Sbjct: 117 KDIVDIPSYNCELGDIITIKNQERYRSIIMERFNSLQKPGIPNHLAFDSTKFIGSVNQMI 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 NR---EWIDLEINELLVVEYYSR 196


>gi|39546753|gb|AAR28103.1| small ribosomal protein 4 [Alophosia azorica]
          Length = 194

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSGY---INQSVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A  ++G T   L+  LE RLD I++R    P+I  ARQ VNH+H+LVN   V
Sbjct: 57  QLLKYVRIAKGAKGSTGQILLQLLEMRLDNIIFRLGMAPSIPGARQLVNHKHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +L+    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAIILKNMDFSQKYKIPNHLTFNSFEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RELIDLKINELLVVEYYSR 192


>gi|15894872|ref|NP_348221.1| 30S ribosomal protein S4 [Clostridium acetobutylicum ATCC 824]
 gi|26399602|sp|Q97IP6|RS4C_CLOAB RecName: Full=Putative 30S ribosomal protein S4 C
 gi|15024549|gb|AAK79561.1|AE007669_4 Ribosomal protein S4 [Clostridium acetobutylicum ATCC 824]
 gi|325509010|gb|ADZ20646.1| 30S ribosomal protein S4 [Clostridium acetobutylicum EA 2018]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+     + K+ RR+G N++G PK+     +         RK K S +G+ L  KQK+K 
Sbjct: 1   MATMREPRFKLSRRLGVNIYGHPKAMKRFETT------NTRKKKISDYGMHLIEKQKLKA 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F    K A +++  +  +L+  LE RLD +VYR  F  +I  ARQ V+H  
Sbjct: 55  YYGVL-EKQFSRYVKAAMKNKEASGSSLLKILECRLDNVVYRIGFANSIRQARQMVSHGL 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
           +LVNG+ ++I SY  + GDV+ +K+K +Q          L+  +VP YI  N D      
Sbjct: 114 ILVNGKKLDIPSYEVQVGDVVSLKEKHRQNEMFSNNFMNLSTFNVP-YIEKNPDEFSGKL 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +R+P+  +    P+ +    V+EFYS+
Sbjct: 173 LRLPNIDE---IPIKVNEVAVIEFYSK 196


>gi|313573576|emb|CAT03210.1| ribosomal protein S4 [Chileobryon callicostelloides]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|78369631|gb|ABB43045.1| ribosomal protein 4 [Calymperes palisotii]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 10/203 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S            K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLSGLTNKIPQLKSSSIT-----MSNKKISQYRIRLEEKQKLRFHYG- 54

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 55  LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTISGARQLVNHRHILVN 114

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D I +K + K    +++    + +  +P +++ N         +I 
Sbjct: 115 NRIVNIPSYKCKPQDFITIKDQQKYQTMIIKNINFSPKYKIPSHLTFNSVEKKGLVNQI- 173

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 174 --LDQESIGLKVNELLVVEYYSR 194


>gi|67035556|gb|AAY62709.1| small ribosomal protein subunit 4 [Aloinella cucullifera]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P+   S+    +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGILPXLTHKTPLLKSSFT---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNH+H+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHKHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A +++  + +++  VP +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSRAMIIKNVEFSQKSKVPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|159040306|ref|YP_001539559.1| 30S ribosomal protein S4 [Salinispora arenicola CNS-205]
 gi|157919141|gb|ABW00569.1| RNA-binding S4 domain protein [Salinispora arenicola CNS-205]
          Length = 202

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 9/203 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K K  R +G  L  +       R + PG HG+ RK   S + ++L  KQ++K  Y  +S
Sbjct: 6   PKVKRSRALGIPLTPKCVRYFERRPFPPGQHGRSRK-STSDYKVRLLEKQRLKAQY-HVS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R  F  A R    T   LI  LE+RLD +V R+    TI+ ARQ V HRHV VNG 
Sbjct: 64  EGQLRRAFTRAARLESKTGEALIVDLETRLDALVLRSGLARTIYQARQVVTHRHVTVNGH 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIP 183
            V+  S R + GDVI V  +S+  A  L A+  A   ER  P Y++V+  ++ A  +R+P
Sbjct: 124 RVDRPSARLRPGDVIAVTARSRTKAPFLVAAAGAHAPERSAP-YLAVDLADLTARLLRLP 182

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
              +    PV  Q  LVVE YSR
Sbjct: 183 LRSE---VPVTCQEQLVVEHYSR 202


>gi|42556500|gb|AAS19845.1| small ribosomal protein 4 [Schiffneria hyalina]
          Length = 191

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGVLPGLTSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+ +N   ++I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISINKNIIDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY  + GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +I +      
Sbjct: 117 SYIREAGDIITMRDKQKSKSMITKNINLFQKLKIPSHLTFDLTQLQGSVNQIVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|37960585|gb|AAP70662.1| small ribosomal protein 4 [Sphagnum cyclophyllum]
          Length = 191

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P +  SY   ++      K S + ++L  KQK++ +YG I+E++   
Sbjct: 2   RRLGVLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI S
Sbjct: 58  YVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A +  +   +     P +++++      +  +I         
Sbjct: 118 YRCKPQDFITIKDRQESQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 GLKINELLVVEYYSR 189


>gi|237742279|ref|ZP_04572760.1| SSU ribosomal protein S4P [Fusobacterium sp. 4_1_13]
 gi|256845558|ref|ZP_05551016.1| ribosomal protein S4 [Fusobacterium sp. 3_1_36A2]
 gi|294785153|ref|ZP_06750441.1| ribosomal protein S4 [Fusobacterium sp. 3_1_27]
 gi|229429927|gb|EEO40139.1| SSU ribosomal protein S4P [Fusobacterium sp. 4_1_13]
 gi|256719117|gb|EEU32672.1| ribosomal protein S4 [Fusobacterium sp. 3_1_36A2]
 gi|294486867|gb|EFG34229.1| ribosomal protein S4 [Fusobacterium sp. 3_1_27]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +         + R   P         KP+ +  QLR KQK K 
Sbjct: 1   MARNRQPVLKKCRNLGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ EK+FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H
Sbjct: 56  IY-NVMEKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR VNI S+R K GD++ V + SK +  +  A + A    P ++ ++        +
Sbjct: 115 IAVNGRRVNIASFRVKVGDIVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P+          +  +L+VEFYSR
Sbjct: 173 QNPTKDD---LDFDLNESLIVEFYSR 195


>gi|116010531|emb|CAL38869.1| ribosomal protein S4 [Dipsacus fullonum]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 7/200 (3%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G+      K P      G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGDLPGLTNKKP----RAGSDPRNQSRSVKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R   I++R    PTI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQVLLRLLEMRFHNILFRLGMAPTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  + +    A + ++   +   ++P+++++          +I  S 
Sbjct: 116 VDIPSYRCKPRDIITARDEQNSRALIQKSLDSSTHEELPKHLTLQSFQYKGLVNQIIDS- 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           K V   + +   LVVE+YSR
Sbjct: 175 KWVVLNLKINELLVVEYYSR 194


>gi|121761730|gb|ABM64952.1| ribosomal protein S4 [Plagiomnium drummondii]
 gi|121761744|gb|ABM64959.1| ribosomal protein S4 [Plagiomnium ciliare]
 gi|121761796|gb|ABM64984.1| ribosomal protein S4 [Plagiomnium ciliare]
 gi|121761810|gb|ABM64991.1| ribosomal protein S4 [Plagiomnium ciliare]
 gi|121761812|gb|ABM64992.1| ribosomal protein S4 [Plagiomnium ciliare]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|20531103|gb|AAM27372.1| ribosomal protein 4 [Blindia magellanica]
          Length = 192

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   VNI
Sbjct: 57  LNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D   +K + K  A V++    +++  VP +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFFTIKDRQKSQAMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|67035933|gb|AAY62893.1| small ribosomal protein subunit 4 [Erythrodontium longisetum]
          Length = 197

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNH+H+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHKHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I  
Sbjct: 117 SIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|313573570|emb|CAT03207.1| ribosomal protein S4 [Neckera himalayana]
 gi|313573572|emb|CAT03208.1| ribosomal protein S4 [Neckera polyclada]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|153954808|ref|YP_001395573.1| 30S ribosomal protein S4 [Clostridium kluyveri DSM 555]
 gi|219855268|ref|YP_002472390.1| hypothetical protein CKR_1925 [Clostridium kluyveri NBRC 12016]
 gi|146347666|gb|EDK34202.1| RpsD2 [Clostridium kluyveri DSM 555]
 gi|219568992|dbj|BAH06976.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 197

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ R   K K+ RR+G N++G PK  ++        HG +     S +G QL  KQK+K 
Sbjct: 1   MATRREPKFKLCRRLGVNIYGHPK-AMDRVKKVNSRHGSK----ISEYGRQLLEKQKIKA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F+   + A++S+  T   L+  LE RLD IVYR  F  +I  +RQ VNH H
Sbjct: 56  YYG-LFEKQFKRYIRRAEKSKNVTGTALLKILECRLDNIVYRIGFGNSIRQSRQMVNHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATF 179
           +LVN + +NI SY    GDVI + QKS+           L + ++P YI  N DN     
Sbjct: 115 ILVNNKKINIPSYEVHAGDVISLVQKSRNNKEFCFNFLDLRKFELP-YIEKNFDNFQGIL 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +R+P   +    P+ +    VVE YS+
Sbjct: 174 IRLPEKEE---LPIEVNEIAVVELYSK 197


>gi|293634037|gb|ADE60398.1| ribosomal protein subunit 4 [Pogonatum dentatum]
          Length = 192

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 10/198 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           I RR+G       K+P       PG   Q     K S + ++L  KQK++ +YG I+E++
Sbjct: 1   IIRRLGALPGLTNKTPQLK----PGYMNQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VN
Sbjct: 56  LLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + +    + +    +++  +P +++ N         +I   L  
Sbjct: 116 IPSYRCKPQDFITIKDRQESQVIIDKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDR 172

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 173 ESIGLKINELLVVEYYSR 190


>gi|66866218|gb|AAY57781.1| small ribosomal protein 4 [Cryptopodium bartramioides]
          Length = 207

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 13/212 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M      + +I RR+G       K+P    +    ++      K S + ++L  KQK++ 
Sbjct: 1   MPGYRGPRVRIIRRLGVLPGLTNKTPQVKSNS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDN 174
           +LVN R VNI SYRCK  D I +K + K    +      +     ++  +P +++ N   
Sbjct: 117 ILVNDRIVNIPSYRCKPQDFITIKDRQKYQTIIXXXXXXKNIDFCQKYKIPHHLTYNSLE 176

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 +I   L      + +   LVVE+YSR
Sbjct: 177 KKGLVNQI---LDRESIALKINELLVVEYYSR 205


>gi|28194719|gb|AAO33621.1|AF480976_1 ribosomal protein S4 [Weissia controversa]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|11228617|gb|AAG33094.1| small ribosomal protein 4 [Bryoxiphium norvegicum]
          Length = 191

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|18920747|gb|AAL82418.1| ribosomal protein system 4 [Isopterygiopsis pulchella]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T       LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVSSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|121761742|gb|ABM64958.1| ribosomal protein S4 [Plagiomnium cuspidatum]
 gi|121761748|gb|ABM64961.1| ribosomal protein S4 [Plagiomnium cuspidatum]
 gi|121761765|gb|ABM64969.1| ribosomal protein S4 [Plagiomnium cuspidatum]
 gi|121761785|gb|ABM64979.1| ribosomal protein S4 [Plagiomnium cuspidatum]
 gi|121761794|gb|ABM64983.1| ribosomal protein S4 [Plagiomnium cuspidatum]
 gi|121761818|gb|ABM64995.1| ribosomal protein S4 [Plagiomnium acutum]
 gi|121761871|gb|ABM65021.1| ribosomal protein S4 [Plagiomnium acutum]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|121761767|gb|ABM64970.1| ribosomal protein S4 [Plagiomnium ellipticum]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K +      + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|37992537|gb|AAR06447.1| small ribosomal protein 4 [Hampeella alaris]
          Length = 199

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I VK        + +    +++  +P ++  +         +I
Sbjct: 117 NDCIVNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|42556510|gb|AAS19850.1| small ribosomal protein 4 [Trichocolea tomentella]
          Length = 191

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKYSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R    PTI  ARQ V HRH+ +N   V+I 
Sbjct: 57  KYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMAPTIPGARQLVTHRHISINNEIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD I ++ K K  + + +   L ++  +P +++ N   +  +  +  +      
Sbjct: 117 SYNCEPGDTITIRNKQKSQSVITKNINLFQKLKIPSHLTFNSTQLRGSVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|39546763|gb|AAR28108.1| small ribosomal protein 4 [Porella pinnata]
 gi|49182782|gb|AAT57853.1| small ribosomal protein [Porella pinnata]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+    +     +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RLKIIRRLGALPGFTAKTL---KPKSSNIDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A  ++G T   L+  LE RLD  ++      TI  ARQ VNH+H+ +N  +
Sbjct: 57  RQLLKYIRTARNAKGSTGQILLQLLEMRLDNTIFCLGMASTIPGARQLVNHKHISINNDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I ++ + K  + +       ++ ++P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCKPGDIITIRNREKSQSIITRNINSFKKLEIPNHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWINLKVNELLVVEYYSR 193


>gi|37960591|gb|AAP70665.1| small ribosomal protein 4 [Sphagnum lapazense]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +   Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTNKTPQSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +  +   ++    P +++++         +I     
Sbjct: 118 NIPSYRCKPRDFITIKDRPKSQAIITRSMDYSQSHKTPNHLNLDSSQKKGLVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|67035978|gb|AAY62915.1| small ribosomal protein subunit 4 [Rhytidiadelphus triquetrus]
          Length = 194

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|80974170|gb|ABB53778.1| small ribosomal subunit protein 4 [Ptychomnion aciculare]
          Length = 197

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             VNI SYRCK  D I +K +      + +     ++  +P +++ +         +I  
Sbjct: 117 SIVNIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKSKIPNHLTYSFLEKKGLINKI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|67035586|gb|AAY62724.1| small ribosomal protein subunit 4 [Bruchia drummondii]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKIPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A +L+    +++  VP +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGVVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|66866214|gb|AAY57779.1| small ribosomal protein 4 [Plagiopus oederianus]
          Length = 208

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 13/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 5   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMVA 177
           N R V+I SYRCK  D I +K + K  A +      +     ++  +P +++ N      
Sbjct: 121 NDRMVDIPSYRCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYNSLENKG 180

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I   L      +     LVVE+YSR
Sbjct: 181 LVNQI---LDRESIGLKTNELLVVEYYSR 206


>gi|47606916|gb|AAT36378.1| ribosomal protein subunit 4 [Mittenia plumula]
          Length = 194

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    L   ++    S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSTSINQLISNKK---ISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVNGR V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHKHILVNGRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    V++    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDSIIIKDRQKSKNIVIKNLDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKVNELLVVEYYSR 192


>gi|24473846|gb|AAL82767.1| small ribosomal subunit protein 4 [Bryum gemmiparum]
          Length = 197

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGALQGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I  
Sbjct: 117 RIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|67035638|gb|AAY62750.1| small ribosomal protein subunit 4 [Hypodontium dregei]
          Length = 194

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKYQAMIIKNLDFSQKTKVPNHLTFNSLEKNGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|121761835|gb|ABM65003.1| ribosomal protein S4 [Plagiomnium novae-zealandiae]
          Length = 195

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|67035656|gb|AAY62759.1| small ribosomal protein subunit 4 [Ceratodon purpureus]
 gi|67035658|gb|AAY62760.1| small ribosomal protein subunit 4 [Ceratodon purpureus]
 gi|67035660|gb|AAY62761.1| small ribosomal protein subunit 4 [Ceratodon purpureus]
          Length = 194

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    +++ +  +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESVGLKINELLVVEYYSR 192


>gi|83940937|gb|ABC48865.1| rps4 [Pterostyrax psilophyllus]
          Length = 193

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       K P++    G  L  Q R  K S + ++L  KQK++ +YG ++E++ 
Sbjct: 3   KIRRLGALPGLTNKRPID----GTDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LTERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I
Sbjct: 58  LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D+I  + + K    +  +   +   ++P+++++          +I  S    
Sbjct: 118 PSYRCKPRDIITSRDEQKSRVLIQHSLDSSHHEELPKHLTLYPFQYKGLVNQIIDSK--- 174

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 175 WVGLKINELLVVEYYSR 191


>gi|49182807|gb|AAT57865.1| small ribosomal protein [Telaranea pulcherrima]
          Length = 196

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  + R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRPDNTILRLGMASTIPGARQLVNHRHISINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSIDQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIDLKINELLVVEYYSR 193


>gi|28194695|gb|AAO33609.1|AF480964_1 ribosomal protein S4 [Leptobarbula berica]
          Length = 196

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFISIKDRQKSQVMITKNIDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LNQESIGLKINELLVVEYYSR 194


>gi|157689440|gb|ABV65276.1| ribosomal protein S4 [Ceanothus prostratus]
          Length = 191

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       + P      G  L  Q R  K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   KIRRLGALPGLTSQKP----RAGSDLRNQSRPGKKSQYRIRLEEKQKLRFHYG-LTEQQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I
Sbjct: 56  LKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D+I V+ + K  A V      A   ++P++++++         +I  S    
Sbjct: 116 PSYRCKTRDIITVRDEQKSRALVQNYLDSASPEELPKHLTLHPFQYKGFINQIIDSK--- 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 WVGLKINELLVVEYYSR 189


>gi|227345141|gb|ACP28123.1| small ribosomal protein 4 [Eotrichocolea polyacantha]
          Length = 191

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     +Y   +       K S + ++L  KQK++ +YG ++E++   
Sbjct: 2   RRLGALPGLTNKTLKPKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I S
Sbjct: 58  YLRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNEIVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C+ GD I ++ K K  + + +   L ++  +P +++ +   +  +  +I +       
Sbjct: 118 YNCEPGDTITIRNKQKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQIINR---EWI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 HLKINELLVVEYYSR 189


>gi|18920755|gb|AAL82422.1| ribosomal protein system 4 [Myurella julacea]
          Length = 197

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 4   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 59

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 60  QLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 119

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 120 DIPSYRCKPQDFITIKDQKKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 176

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 177 RESIGLKINELLVVEYYSR 195


>gi|7109199|gb|AAF36675.1| ribosomal protein 4 [Rhabdoweisia crispata]
          Length = 190

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI S
Sbjct: 57  YLRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCTVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +    +++  VP +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQKSQAMISKNIDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLKINELLVVEYYSR 188


>gi|121761873|gb|ABM65022.1| ribosomal protein S4 [Plagiomnium acutum]
          Length = 195

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + ++ RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRLIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKNRQKSQTMISKNIDFCQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|37992567|gb|AAR06462.1| small ribosomal protein 4 [Lembophyllum divulsum]
          Length = 195

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|314906415|gb|ADT61780.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 196

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|315924067|ref|ZP_07920293.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622469|gb|EFV02424.1| 30S ribosomal protein S4 [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 204

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 112/206 (54%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M ++   + K  RR G NL+G PK+     S        RR+ KPS +  QL  KQK+K 
Sbjct: 10  MGQKRKPRFKQCRRFGVNLYGNPKALDRKVSE-------RRRGKPSEYSQQLNEKQKVKA 62

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YY +I EK+ R  +++A +  G TS +L   LESRLD +V R  F  TIF ARQ V H H
Sbjct: 63  YY-NIREKQMRRYYEDAFKREGTTSLHLFRSLESRLDNLVLRMHFASTIFQARQMVGHGH 121

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNGR V+I SY+ + GD I +KQ S+         Q        Y+ V+ +    T+ 
Sbjct: 122 ILVNGRRVDIPSYQVRPGDTISLKQASRSNEMFKANFQDNAGAAVPYVCVDENQFSGTYE 181

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +    P+ ++  LV+EFYSR
Sbjct: 182 RLPERGE---IPIDVEDQLVIEFYSR 204


>gi|42556396|gb|AAS19793.1| small ribosomal protein 4 [Bazzania sp. He-Nygren 569]
          Length = 191

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     S+           K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSH---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+HV +N   V+I 
Sbjct: 57  KYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHKHVAINNNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +      
Sbjct: 117 SYNCKPGDIITMRDKQKSQSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|21914184|gb|AAM81314.1| ribosomal protein subunit 4 [Rhodobryum spathulatum]
          Length = 196

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGALPGPTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYIRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRC+  D I +K + K  A + +   L ++   P +++ N         +I   
Sbjct: 117 IVNIPSYRCRPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|67035708|gb|AAY62785.1| small ribosomal protein subunit 4 [Campylostelium angustifolium]
          Length = 194

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKXPQLK---PSXINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNXIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFINIKDQQKSQAMIIKNVDFSQKYKVPNHLTFNSVEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
           +    + +   LVVE+YSR
Sbjct: 174 NESXGLKINELLVVEYYSR 192


>gi|224179457|ref|YP_002600860.1| ribosomal protein S4 [Pycnococcus provasolii]
 gi|217314500|gb|ACK36842.1| ribosomal protein S4 [Pycnococcus provasolii]
          Length = 201

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+GE      +  +  R+  PG HG  R+ +   F ++LR KQK++ 
Sbjct: 1   MSRYRGPRIRVVRRLGELPGLTRR--IAKRTNPPGEHGAARQKQS-QFDIRLREKQKLRY 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++  ++ + A +S+G T + L+S LE RLD IVYR  F PTI A+RQ V H H
Sbjct: 58  HYG-VTERQLLTLVRRARQSKGATGNFLLSTLERRLDNIVYRLGFAPTIRASRQLVTHGH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNGR V+I S+ C+ GD+I +  +++    V    +  +R +P ++++  D      +
Sbjct: 117 ICVNGRCVDISSFNCQIGDIISINTRTQSQKLVEGFIKSNDRPIPPFLALQPDGKSGRVL 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   +       +  +P L +E YSR
Sbjct: 177 Q---NCSLKDIGLQARPQLSIEHYSR 199


>gi|26421825|gb|AAN78171.1| ribosomal protein S4 [Tortula marginata]
          Length = 195

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLSNKIPHLK---PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|18920763|gb|AAL82426.1| ribosomal protein system 4 [Orthothecium rufescens]
          Length = 195

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|331004148|ref|ZP_08327628.1| 30S ribosomal protein S4 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411558|gb|EGG90968.1| 30S ribosomal protein S4 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 197

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G           + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAINRVPVLKRCRSLGLEPGFLGIDKKSNRDT------KRANRKLSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A+R +G    NL+  LE RLD +V+R     T    RQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKAERMKGQVGENLMVLLERRLDNVVFRMGLGRTRKETRQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+K+K++  A   E  +  A R VP +I  + +N+  T 
Sbjct: 114 VLVNGKCVNIPSYLVKAGDVIEIKEKARSSARYKEVVESTAGRIVPAWIDADLENLKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KSLPTREE---IDVPVDELLIVELYSK 197


>gi|37548873|gb|AAO32705.1| ribosomal protein 4 [Polytrichadelphus pseudopolytrichum]
          Length = 192

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 7/196 (3%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y        +K   S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGYINQQTLSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 58  NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A ++     +++  +P +++ N         +I   L    
Sbjct: 118 SYRCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 174

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 175 IDLKINELLVVEYYSR 190


>gi|11228650|gb|AAG33110.1| small ribosomal protein 4 [Kiaeria blyttii]
          Length = 190

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++    +++  VP +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|3098214|gb|AAC15555.1| small ribosomal protein 4 [Paludella squarrosa]
          Length = 195

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|63191683|gb|AAY34803.1| small ribosomal protein subunit 4 [Orthothecium chryseum]
          Length = 195

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|22854705|gb|AAN09772.1| small ribosomal protein 4 [Distichium inclinatum]
          Length = 191

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R     TI  ARQ +NHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLINHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++  + +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIIKNIEFSQKYKVPNHLTFNSLQKKGLVTQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VGLKINELLVVEYYSR 189


>gi|77862563|gb|ABB04554.1| small ribosomal protein 4 [Wiesnerella denudata]
          Length = 201

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E
Sbjct: 7   RVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 62

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N  +
Sbjct: 63  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINNNT 122

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SY CK  DVI +K ++K  + + +     ++  +P +++ +   +     +I    
Sbjct: 123 IDIPSYNCKPKDVITIKDRAKSQSIITKNLNSFQKPKIPNHLTFDLMQIKGLVNQIIDR- 181

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 182 --EWIYLKINELLVVEYYSR 199


>gi|18920735|gb|AAL82412.1| ribosomal protein system 4 [Catagonium nitens subsp. maritimum]
          Length = 197

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGALPGLSNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 58  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   
Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 175 LDRESIGLKINELLVVEYYSR 195


>gi|222103452|gb|ACM44255.1| small ribosomal protein subunit 4 [Plagiothecium platyphyllum]
          Length = 203

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 7/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S        ++    S+   +    +K++ +YG
Sbjct: 4   YRGPRVRIIRRLGTLPGLTNKTPQLKSSSINQSTSNKKIFSVSHSFRR--KNKKLRFHYG 61

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 62  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILV 120

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I
Sbjct: 121 NDCIVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI 180

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 181 ---LDRESIGLKINELLVVEYYSR 201


>gi|63191753|gb|AAY34836.1| small ribosomal protein subunit 4 [Leiomitrium plicatum]
          Length = 196

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +     ++  +P ++  N         +I   
Sbjct: 117 IVNIPSYRCKPLDFITIKDRQKSQNIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRELIGLKINELLVVEYYSR 194


>gi|121761823|gb|ABM64997.1| ribosomal protein S4 [Plagiomnium maximoviczii]
          Length = 195

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|21914144|gb|AAM81294.1| ribosomal protein subunit 4 [Acidodontium seminerve]
          Length = 196

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A + +G T   L+ FLE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKVKGSTGEILLQFLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFSKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|7576775|gb|AAF63984.1| small ribosomal protein 4 [Polytrichum commune]
 gi|37548883|gb|AAO32710.1| ribosomal protein 4 [Polytrichum juniperinum]
 gi|293634125|gb|ADE60442.1| ribosomal protein subunit 4 [Polytrichum strictum]
          Length = 192

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI
Sbjct: 57  LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|21914180|gb|AAM81312.1| ribosomal protein subunit 4 [Haplodontium megalocarpum]
          Length = 196

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   
Sbjct: 117 MVNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNVLKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|28194731|gb|AAO33627.1|AF480982_1 ribosomal protein S4 [Syntrichia leucostega]
          Length = 196

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|5911468|emb|CAA58928.1| ribosomal protein S4 [Cycas revoluta]
          Length = 196

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 9/204 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P  +R+        R+    S + ++   KQK+  
Sbjct: 1   MSRYRGPRLKIIRRLRTLPGLTNKRP-KSRNVPTNQSSSRK---ISQYRIRPEEKQKLPF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           +LVN R V+I SYRCK  DVI +  + +  A + +   L+++D +P +++++        
Sbjct: 116 ILVNDRVVDIPSYRCKPRDVITIIDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I  S       + +   LVVE+
Sbjct: 176 NQIIDSK---WISLKINELLVVEY 196


>gi|67035684|gb|AAY62773.1| small ribosomal protein subunit 4 [Holomitriopsis laevifolia]
          Length = 194

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K      +    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKISQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  + V +  + +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFNSLEKKGVVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 HESIGLKINELLVVEYYSR 192


>gi|11467040|ref|NP_041947.1| ribosomal protein S4 [Euglena gracilis]
 gi|133953|sp|P27418|RR4_EUGGR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|336889|gb|AAA84230.1| ribosomal protein S4 [Euglena gracilis]
 gi|415790|emb|CAA50134.1| 30S ribosomal protein S4 [Euglena gracilis]
 gi|228205|prf||1718312A ribosomal protein S4
          Length = 205

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 116/207 (56%), Gaps = 5/207 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RRIG+      K+    +S G      +RK K S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLRIVRRIGKLPSLTNKTSKKRKSPGQPATSFKRKKKISKYNIRLKEKQKLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E++  +  K++ + +G +   L++FLE RLD IV+R  F PTI AA+Q +NH H
Sbjct: 61  NYG-ITERQLLNYVKKSRKKKGSSGRFLLTFLEMRLDNIVHRIGFAPTIMAAKQLINHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + V+ + +NI S+ C+   +I+ K+ +     + +  +  E   +P ++S+N  N+ A  
Sbjct: 120 ICVDDKVINIPSFICQPKSIIKPKKSTVSENVIQKNIESKELLLIPPHLSLNKKNLEAKI 179

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + + +        +I+   LV+EFYSR
Sbjct: 180 IGLINRKA---ISLIVNELLVIEFYSR 203


>gi|293634085|gb|ADE60422.1| ribosomal protein subunit 4 [Polytrichastrum emodi]
          Length = 192

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI
Sbjct: 57  LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A +      ++   +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SINLKINELLVVEYYSR 190


>gi|24473834|gb|AAL82761.1| small ribosomal subunit protein 4 [Plagiobryum wrightii]
          Length = 196

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|63078570|gb|AAY29372.1| ribosomal protein S4 [Chionoloma bombayense]
          Length = 197

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S            K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLSNKTPHLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R +NI SYRCK  D I +K + K    + +     ++  +P +++ N         +I  
Sbjct: 117 RILNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQELIGLKINELLVVEYYSR 195


>gi|63191730|gb|AAY34825.1| small ribosomal protein subunit 4 [Leiomela bartramioides]
          Length = 194

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++ ++P +++ N         +I   L 
Sbjct: 117 DIPSYRCKSHDFITIKDRQKSQTIISKNIDFYQKYEIPNHLTYNSSENKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|227345115|gb|ACP28110.1| small ribosomal protein 4 [Castanoclobos julaceus]
          Length = 191

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GDVI V+ K K  + + +   L ++  +  +++ +   +  +  +  +      
Sbjct: 117 SYNCESGDVITVRNKQKSQSIITKNINLFQKLKLSNHLTFDSTQLCGSINQTINR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|157689534|gb|ABV65323.1| ribosomal protein S4 [Parnassia palustris]
          Length = 194

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGVLPGLTGKRP----RVGNDLRTQPRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  +E RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVRIAGKAKGSTGQILLQLIEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K + K  A +          ++P++++++         RI  S 
Sbjct: 116 VDIPSYRCKPRDIITAKDEQKSRALIQNYLYSSTHEELPKHLTLHPIQYKGLVNRIIESQ 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---FIGLKINELLVVEYYSR 192


>gi|42556470|gb|AAS19830.1| small ribosomal protein 4 [Nowellia sp. He-Nygren 1097]
          Length = 190

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGVLPGLSSKTLKSKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD  V+R    PTI  ARQ VNH H+ +N   ++I S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHGHISMNNNIIDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C+ GD+I ++ K +  + + +   L ++   P +++ +   +  +  ++ +       
Sbjct: 117 YNCQPGDIITIRNKLESRSMITKNINLFQKLKTPSHLTFDLTELQGSVNQMINR---EWV 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 NLKINELLVVEYYSR 188


>gi|7109201|gb|AAF36676.1| ribosomal protein 4 [Grimmia pulvinata]
          Length = 196

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 4   KIIRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 59

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VN
Sbjct: 60  LLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVN 119

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K  + +++    +++  +P +++ N         +I   L  
Sbjct: 120 IPSYRCKPQDFITIKDRQKSQSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDH 176

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 177 ESIGLKINELLVVEYYSR 194


>gi|42794671|gb|AAS45732.1| Rps4 [Psammisia sodiroi]
          Length = 209

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQ +
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQNL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSK-----QLASVLEASQLAERDVPEYISVNHD 173
           RHVLVNGR ++I SYRCK  D+I  ++KS+        ++ +      + VP ++++N  
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRVPYHLTLNRG 175

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 176 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 205


>gi|37548875|gb|AAO32706.1| ribosomal protein 4 [Polytrichastrum alpinum]
          Length = 193

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KXIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VN
Sbjct: 57  LLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKDRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLINQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|121761724|gb|ABM64949.1| ribosomal protein S4 [Plagiomnium medium]
 gi|121761738|gb|ABM64956.1| ribosomal protein S4 [Plagiomnium medium]
 gi|121761752|gb|ABM64963.1| ribosomal protein S4 [Plagiomnium medium]
 gi|121761781|gb|ABM64977.1| ribosomal protein S4 [Plagiomnium medium]
 gi|121761787|gb|ABM64980.1| ribosomal protein S4 [Plagiomnium medium]
          Length = 195

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|259506742|ref|ZP_05749642.1| 30S ribosomal protein S4 [Corynebacterium efficiens YS-314]
 gi|259165683|gb|EEW50237.1| 30S ribosomal protein S4 [Corynebacterium efficiens YS-314]
          Length = 178

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 6/182 (3%)

Query: 26  PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
               R Y PG  G+ R  +  Y  LQL+ KQK +  YG + EK+FR  + EA+R  G T 
Sbjct: 2   AFERRPYPPGQAGRARIKESEYL-LQLQEKQKARFIYG-VMEKQFRRYYAEANRRPGKTG 59

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            NL+  LESRLD +VYRA    T   ARQ V+H H +VNG++V++ S+R  + D+I+V++
Sbjct: 60  ENLVVMLESRLDNVVYRAGLARTRRQARQLVSHGHFVVNGKAVDVPSFRVSQYDIIDVRE 119

Query: 146 KSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           KS+++    EA   L +  VP ++ V    +     ++P   +     + +Q  L+VEFY
Sbjct: 120 KSQKMNWFEEAQDNLVDAIVPAWLQVVPSTLRILVHQLPERAQ---IDIPLQEQLIVEFY 176

Query: 205 SR 206
           S+
Sbjct: 177 SK 178


>gi|227499169|ref|ZP_03929304.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904616|gb|EEH90534.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 197

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  ++   K  R +G +          +         +R+  K S +G+QL  KQK K 
Sbjct: 1   MAIDKTPVLKRCRSLGMSPAFVG-VMKESHRQP-----KRQFKKKSEYGMQLAEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +++A +  G    NL+  LE RLD +VYR     T   ARQ V H H
Sbjct: 55  IYGVL-EKQFRGYYEKAKKMEGIAGTNLLILLERRLDNVVYRLGLARTRRQARQLVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNMVATF 179
           + VNG+ ++I S   K GDV+ V + S+  A     A  L +  VP +ISV+  N+    
Sbjct: 114 IAVNGKRLDIPSALVKAGDVVSVMEGSRSSAYFKGMAETLGKSAVPAWISVDGQNLSGKV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +     V ++  L++E YS+
Sbjct: 174 DRLPVRDE---IDVPIEEQLIIELYSK 197


>gi|171920763|ref|ZP_02695909.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185179021|ref|ZP_02555262.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024074|ref|ZP_02569813.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518325|ref|ZP_02556234.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188524320|ref|ZP_02557924.2| ribosomal protein S4 [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867952|ref|ZP_03079949.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273253|ref|ZP_03205789.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554088|ref|YP_002284942.1| 30S ribosomal protein S4 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225551036|ref|ZP_03771982.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|226695097|sp|B5ZC02|RS4_UREU1 RecName: Full=30S ribosomal protein S4
 gi|171903514|gb|EDT49803.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209112|gb|EDU06155.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188019116|gb|EDU57156.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998272|gb|EDU67369.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660051|gb|EDX53431.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660348|gb|EDX53608.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249773|gb|EDY74553.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541589|gb|ACI59818.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225378851|gb|EEH01216.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 202

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 81/209 (38%), Positives = 116/209 (55%), Gaps = 12/209 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+   S +K  RR+G +L    K       R+YGPG HG  +K K S +G QL  KQK+
Sbjct: 1   MSRYTGSIYKKSRRLGFSLLENNKEFNSGKKRTYGPGQHGN-KKVKLSNYGQQLVEKQKL 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
              YG +++++FR +++ A    G  + NL+  LESRLD++VYRA F PT  AARQ VNH
Sbjct: 60  MFLYG-LNDRQFRRLYRVALGRPGVLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVA 177
            HVLVNG+ VNI S   + G  I +K+KS ++  +            ++I  V+ D  VA
Sbjct: 119 SHVLVNGKKVNIPSALVEVGSTIALKEKSLEMPLIKNTLNKPA----DFIELVDKDKKVA 174

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R+P   +    P  +    VVE+Y+R
Sbjct: 175 KLSRLPERSE---LPADVNEAYVVEWYNR 200


>gi|21914176|gb|AAM81310.1| ribosomal protein subunit 4 [Epipterygium tozeri]
          Length = 195

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     +   +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQNYKIPNHLTYNSLTKKGLVXQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|11228631|gb|AAG33101.1| small ribosomal protein 4 [Dicranoweisia cirrata]
          Length = 190

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++    +++  VP +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|63191724|gb|AAY34822.1| small ribosomal protein subunit 4 [Flowersia campylopus]
          Length = 195

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGXLPGLTNKTPXLKSSS---INQSTSNKKISXYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAIIXKNIDFYQKYKIPNHLTYNSLENKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|288916882|ref|ZP_06411255.1| ribosomal protein S4 [Frankia sp. EUN1f]
 gi|288351767|gb|EFC85971.1| ribosomal protein S4 [Frankia sp. EUN1f]
          Length = 201

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 80/202 (39%), Positives = 110/202 (54%), Gaps = 7/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
              K+ R IG  L  +       R Y PG HG+ RK+   Y   +LR KQ+++  Y  IS
Sbjct: 5   PVAKLSRSIGMPLTDKAARYFENRPYPPGPHGRGRKTMSPY-KERLREKQRLRFQY-HIS 62

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+ R  F +ADR  G T H LI  LE+RLD +V RA F  TI+ ARQFV+HRH+ VNG 
Sbjct: 63  EKQLRRAFDQADRGTGRTGHLLIEDLETRLDAVVLRAGFAKTIYQARQFVSHRHIQVNGG 122

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--YISVNHDNMVATFVRIPS 184
            V+   +R + GDVI V  +S+ +A     ++      P   Y+ V+   +VA   R PS
Sbjct: 123 RVDRPGFRVQPGDVITVTTRSRTMAPFRIVAETQPTGAPPPAYLDVDRGALVAVLSRRPS 182

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV+    LVVE+Y+R
Sbjct: 183 RPE---IPVVCDEQLVVEYYAR 201


>gi|3098240|gb|AAC15568.1| small ribosomal protein 4 [Leptotheca gaudichaudii]
          Length = 195

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|197131490|gb|ACH47263.1| ribosomal protein S4 [Sarcocaulon vanderietiae]
          Length = 213

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 13/215 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           MS     + K  RR+G             K   ++R     +   R   K S + ++L  
Sbjct: 1   MSHYRGPRFKKIRRLGALPGLTIRKKKPKKRKGDSRRDSSSIMPPRSSRKKSQYRIRLEE 60

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ+++ +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ
Sbjct: 61  KQRVRFHYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPRARQ 119

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVN 171
            VNHRH+LVNGR V+I SYRCK  D+I  ++K K  A +      A    + VP +++  
Sbjct: 120 LVNHRHILVNGRIVDIPSYRCKPRDIITAREKEKSRALIQNYLDSAPAPRKAVPNHLTTY 179

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I    K     + +   LVVE+YSR
Sbjct: 180 RRQYKGLVKQIIDRKK---VGLKINEFLVVEYYSR 211


>gi|67035712|gb|AAY62787.1| small ribosomal protein subunit 4 [Exodictyon dentatum]
          Length = 198

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P +       ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKILRRLGTLSGLSNKTPQSK---ASSINQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRFGLAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D+I +K + K    +++ +    +  +P ++  N         +I 
Sbjct: 117 NRIVNIPSYQCKPQDLITIKDQQKYQTMIVKNTNFFPKSKIPNHLIFNSAEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   L+VE+YSR
Sbjct: 176 --LDKESIGLKINELLIVEYYSR 196


>gi|67035590|gb|AAY62726.1| small ribosomal protein subunit 4 [Wilsoniella karsteniana]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +L+    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|313573574|emb|CAT03209.1| ribosomal protein S4 [Touwia laticostata]
          Length = 196

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLPNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 MVDIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|121761816|gb|ABM64994.1| ribosomal protein S4 [Plagiomnium arbuscula]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|15639298|ref|NP_218747.1| 30S ribosomal protein S4 [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025540|ref|YP_001933312.1| 30S ribosomal protein S4 [Treponema pallidum subsp. pallidum SS14]
 gi|6094183|sp|O83328|RS4_TREPA RecName: Full=30S ribosomal protein S4
 gi|226695095|sp|B2S2Q4|RS4_TREPS RecName: Full=30S ribosomal protein S4
 gi|3322583|gb|AAC65295.1| ribosomal protein S4 [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189018115|gb|ACD70733.1| ribosomal protein S4 [Treponema pallidum subsp. pallidum SS14]
          Length = 204

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSP--VNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQK 57
           M+ +  ++ KI RR+G N++G PK    +  +   PG  HG ++++K S +G QL+ KQK
Sbjct: 1   MAVKR-ARGKIVRRLGINIFGNPKYTRLLGKKPAPPGKEHGVKQRAKVSVYGEQLKEKQK 59

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
            +  YG +SE++FR++F +A R +G T +N++S +E RLD  V+R  F  +   ARQ V+
Sbjct: 60  FRFAYG-MSERQFRNLFAQAHRMKGVTGNNMLSLMERRLDNTVFRMGFAISRVQARQMVS 118

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           HR+ L+NG++ NI S R    DVI  K +    + +     L++     +++V+ + + A
Sbjct: 119 HRYFLINGKTANIPSMRISAHDVITTKNRKGIHSIIRHNLTLSQGQRGSWLNVDEEQLSA 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T   +P +    P         +VE+YSR
Sbjct: 179 TVSELPRAQDIHPVG---NIQHIVEYYSR 204


>gi|37992609|gb|AAR06483.1| small ribosomal protein 4 [Orthostichella pentasticha]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG  V
Sbjct: 58  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNGCIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 118 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIGLKINELLVVEYYSR 193


>gi|42794652|gb|AAS45723.1| Rps4 [Disterigma pernettyoides]
          Length = 211

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKGNRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|47606892|gb|AAT36366.1| ribosomal protein subunit 4 [Cyathophorum bulbosum]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG  V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMFPTIPGARQLVNHRHILVNGSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K  A + +  +  ++  +P +++ N+        +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNYLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035861|gb|AAY62857.1| small ribosomal protein subunit 4 [Papillidiopsis complanata]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CKIIRRLGTLPGLTNKTPQIKSSS---INQPISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K    + +  +  E+  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNKRKSETIISKNIEFYEKSKIPNHLTYNSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|3122760|sp|O22029|RR4B_CYACA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2541890|dbj|BAA22825.1| ribosomal protein S4 [Cyanidium caldarium]
          Length = 192

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 17/206 (8%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + ++ RR+G       KSP   R+  PG H  + + K S F +QL+ KQK++ 
Sbjct: 1   MSRYLGPRVRVIRRLGALPALTNKSP-KKRTIAPGEHAHKTR-KLSEFAVQLQEKQKLQY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG I+  +    F++A RS+  T   L++ LE+RLD +VYRA F PT+ AARQ VNH H
Sbjct: 59  YYG-ITNSQLARYFRQARRSKSSTGLALLTMLETRLDHLVYRAGFAPTLPAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG+ V I S+ C+   VIEVK  S                   Y+ +++  +  T  
Sbjct: 118 VKVNGKKVTIASWACEVNHVIEVKSSSPPKPPEYLPP---------YLQLSNGTLTVT-- 166

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++      ++   LVVE+Y+R
Sbjct: 167 ---QPVQKEWLAFVVNELLVVEYYTR 189


>gi|260438189|ref|ZP_05792005.1| ribosomal protein S4 [Butyrivibrio crossotus DSM 2876]
 gi|292809379|gb|EFF68584.1| ribosomal protein S4 [Butyrivibrio crossotus DSM 2876]
          Length = 197

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R  G      R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRTLGLDPVYLGIDKKSNRKSG------RANKKVSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ FK A++  G T  NL++ LE RLD +++R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYFKRAEKMNGMTGDNLMTLLELRLDNVIFRLGLARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY    GD IE+K+K+K      +  +    R VPE++  + DN+    
Sbjct: 114 VLVNGKCVNIPSYLVNVGDSIEIKEKAKSSQRYKDILEVTGGRLVPEWLDADQDNLKGVV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              PS        V +   L+VE YS+
Sbjct: 174 KAAPSRD---MIDVPVNEMLIVELYSK 197


>gi|46811046|gb|AAT01841.1| small ribosomal protein 4 [Lobatiriccardia lobata]
          Length = 197

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+P +   Y   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRMKIIRRLGTLPGLTSKTPGSGSGY---IDRSTSSKKISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNH+HV +N 
Sbjct: 57  TERQLLKYVRVARGAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHQHVSINE 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GDVI ++ ++K          L ++ ++P +++ +  N + +  +I  
Sbjct: 117 NIVDIPSYNCQPGDVITIRNQAKCRLITERDMNLFQKPEIPNHLAFDSANFLGSINQIID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 RN---WIDLKVNELLVVEYYSR 195


>gi|328541074|gb|AEB21761.1| ribosomal protein S4 [Hyalolepidozia microphylla]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+    +             K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGSLPXXXSKTL---KPKPSYNDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQSLKYVRIARRAKGSTGQVLLQSLEMRLDNTIFRLGMASTIPGARQLVNHRHIAINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L +   +P Y++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCQPGDIITIRDKQKSQSIITKNVNLFQNLKIPSYLTFDSTKLCGSINQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIDIKINELLVVEYYSR 193


>gi|121761734|gb|ABM64954.1| ribosomal protein S4 [Plagiomnium rostratum]
 gi|121761736|gb|ABM64955.1| ribosomal protein S4 [Plagiomnium rostratum]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|157887718|emb|CAM33381.1| ribosomal protein S4 [Leptodontium wallisii]
          Length = 196

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    +     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K  + + +    +++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINNRKKSQSIITKNIDFSQKSKIPHHLAFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|26421769|gb|AAN78143.1| ribosomal protein S4 [Tortula muralis]
 gi|26421771|gb|AAN78144.1| ribosomal protein S4 [Tortula muralis]
 gi|26421775|gb|AAN78146.1| ribosomal protein S4 [Tortula muralis]
 gi|26421777|gb|AAN78147.1| ribosomal protein S4 [Tortula muralis]
 gi|26421779|gb|AAN78148.1| ribosomal protein S4 [Tortula muralis]
 gi|26421787|gb|AAN78152.1| ribosomal protein S4 [Tortula muralis]
 gi|26421791|gb|AAN78154.1| ribosomal protein S4 [Tortula muralis]
 gi|26421793|gb|AAN78155.1| ribosomal protein S4 [Tortula muralis]
 gi|26421795|gb|AAN78156.1| ribosomal protein S4 [Tortula muralis]
 gi|26421799|gb|AAN78158.1| ribosomal protein S4 [Tortula muralis]
 gi|26421801|gb|AAN78159.1| ribosomal protein S4 [Tortula muralis]
 gi|26421803|gb|AAN78160.1| ribosomal protein S4 [Tortula muralis]
 gi|26421805|gb|AAN78161.1| ribosomal protein S4 [Tortula muralis]
 gi|26421811|gb|AAN78164.1| ribosomal protein S4 [Tortula muralis]
 gi|26421813|gb|AAN78165.1| ribosomal protein S4 [Tortula muralis]
 gi|26421815|gb|AAN78166.1| ribosomal protein S4 [Tortula muralis]
 gi|26421817|gb|AAN78167.1| ribosomal protein S4 [Tortula muralis]
 gi|26421819|gb|AAN78168.1| ribosomal protein S4 [Tortula muralis]
 gi|26421821|gb|AAN78169.1| ribosomal protein S4 [Tortula freibergii]
 gi|26421823|gb|AAN78170.1| ribosomal protein S4 [Tortula freibergii]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|293634057|gb|ADE60408.1| ribosomal protein subunit 4 [Pogonatum urnigerum]
          Length = 192

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI
Sbjct: 57  LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHKHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|121761722|gb|ABM64948.1| ribosomal protein S4 [Mnium spinulosum]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|121761757|gb|ABM64965.1| ribosomal protein S4 [Plagiomnium undulatum]
 gi|121761779|gb|ABM64976.1| ribosomal protein S4 [Plagiomnium undulatum]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLKKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|157689492|gb|ABV65302.1| ribosomal protein S4 [Humiria balsamifera]
          Length = 189

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I S
Sbjct: 56  YVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I  + + K  A +      + + ++P++++++         +I         
Sbjct: 116 YRCKPRDIITARGEQKSRAMIQNYLDSSPQEELPKHLTLHPFQYKGVVNQIIDIK---WI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|63191699|gb|AAY34811.1| small ribosomal protein subunit 4 [Leptostomum inclinans]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++   P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKTPNHLTYNSLKKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37548869|gb|AAO32703.1| ribosomal protein 4 [Pogonatum spinulosum]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKIPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQESQDIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992447|gb|AAR06402.1| small ribosomal protein 4 [Camptochaete aciphylla]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|47606932|gb|AAT36386.1| ribosomal protein subunit 4 [Hymenodontopsis mnioides]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIIGKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|291518020|emb|CBK73241.1| SSU ribosomal protein S4P [Butyrivibrio fibrisolvens 16/4]
          Length = 197

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  ++   K  R +  +         + R         R + K S + LQL+ KQK K 
Sbjct: 1   MAVNKTPVLKRCRSLDLDPTFLGYDKKSRRQK------NRGRGKKSEYALQLQEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +++ADR +G T  NL++ LESRLD +V+R  F  T   ARQ V+H+ 
Sbjct: 55  IYGVL-EKPFRNYYEKADRQKGMTGENLMTMLESRLDNVVFRMGFARTRKEARQVVDHKM 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG++VNI SY  K GDVIEV++KSK L    + ++  A R VPE+I V+ +N+  T 
Sbjct: 114 FLVNGKAVNIPSYLVKAGDVIEVREKSKSLQRFKDITEVTAGRMVPEWIDVDAENLKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KELPNREQ---IDVPVDEMLIVELYSK 197


>gi|37992405|gb|AAR06381.1| small ribosomal protein 4 [Acrocladium auriculatum]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|6137687|pdb|1QD7|C Chain C, Partial Model For 30s Ribosomal Subunit
 gi|7245451|pdb|1EG0|A Chain A, Fitting Of Components With Known Structure Into An 11.5 A
           Cryo-Em Map Of The E.Coli 70s Ribosome
 gi|253722760|pdb|1C05|A Chain A, Solution Structure Of Ribosomal Protein S4 Delta 41,
           Refined With Dipolar Couplings (Minimized Average
           Structure)
 gi|253722761|pdb|1C06|A Chain A, Solution Structure Of Ribosomal Protein S4 Delta 41,
           Refined With Dipolar Couplings (Ensemble Of 16
           Structures)
          Length = 159

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/164 (42%), Positives = 98/164 (59%), Gaps = 5/164 (3%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S +GLQL+ KQK++  YG ++E++FR  F+EA +  G    N +  LESRLD +VYR
Sbjct: 1   MKLSEYGLQLQEKQKLRHMYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYR 59

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
                T   ARQ V H H+LV+G  VNI SYR K G  I V++KS+ L  + EA + A  
Sbjct: 60  LGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANN 118

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+Y+S + + M  T+ R+P   +    P  +   L+VEFYSR
Sbjct: 119 YIPDYLSFDPEKMEGTYTRLPERSE---LPAEINEALIVEFYSR 159


>gi|33413247|emb|CAD86758.1| ribosomal protein small subunit 4 [Micromitrium tenerum]
          Length = 199

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 9   IRRLGALPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 64

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 65  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIP 124

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  + V++    +++  VP +++ N         +I   L    
Sbjct: 125 SYRCKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHES 181

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 182 IGLKINELLVVEYYSR 197


>gi|157689556|gb|ABV65334.1| ribosomal protein S4 [Spiraea tomentosa]
          Length = 188

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGALPGLTSKKP----RAVSDLRNQSRPGKKSQYRIRLEEKQKLRFHYG-LTEQQLLKY 55

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 56  VRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPQARQLVNHRHILVNGRIVDIPSY 115

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D+I V+ + K  A +      + R ++P++++++         +I  S       
Sbjct: 116 RCKPRDIITVRDEQKSRALIQNYLDSSPREELPKHLTLHPFQYEGLVNQIIDSK---WVG 172

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 173 LKINELLVVEYYSR 186


>gi|46810986|gb|AAT01811.1| small ribosomal protein 4 [Allisonia cockaynii]
          Length = 197

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G  L G     + ++S         +K   S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGA-LPGLTNKILKSKSGYTNQSVSNKK--ISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L++ 
Sbjct: 57  TERQLLKYVRIARKAKGSTGRVLLQSLEMRLDNIIFRFGMAPTIPGARQLVNHRHILIDD 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184
            +V+I SY CK  DVI +K + K  + +      +++  +P +++ +      +  ++  
Sbjct: 117 ATVDIPSYGCKPRDVITIKNQRKPQSIITRDINSSQKPRIPNHLTFDSTQXRGSVNQMID 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 RD---WIDLKINELLVVEYYSR 195


>gi|3098224|gb|AAC15560.1| small ribosomal protein 4 [Rhacocarpus purpurascens]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L+N R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I VK + K  A + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITVKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLKKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRELIGLKINELLVVEYYSR 193


>gi|75858220|gb|ABA28684.1| small ribosomal protein 4 [Acrobolbus ciliatus]
          Length = 191

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+      Y   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKALKPKSGY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C  GD+I VK + K  + +++   L ++  +P +++ +   +     +  +      
Sbjct: 117 SYNCGPGDIITVKNERKSQSMIIKNINLFQKSKMPSHLTFDSTELRGFVNQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|11228660|gb|AAG33115.1| small ribosomal protein 4 [Orthodicranum fulvum]
          Length = 191

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|63191657|gb|AAY34790.1| small ribosomal protein subunit 4 [Abietinella abietina]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|26421781|gb|AAN78149.1| ribosomal protein S4 [Tortula vahliana]
 gi|26421783|gb|AAN78150.1| ribosomal protein S4 [Tortula vahliana]
 gi|26421785|gb|AAN78151.1| ribosomal protein S4 [Tortula vahliana]
 gi|26421807|gb|AAN78162.1| ribosomal protein S4 [Tortula muralis]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|67035580|gb|AAY62721.1| small ribosomal protein subunit 4 [Oncophorus wahlenbergii]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNDHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|257068798|ref|YP_003155053.1| 30S ribosomal protein S4 [Brachybacterium faecium DSM 4810]
 gi|256559616|gb|ACU85463.1| SSU ribosomal protein S4P [Brachybacterium faecium DSM 4810]
          Length = 208

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 10/212 (4%)

Query: 1   MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+    ++   ++ R +G  L  +       R Y PG HG+ R+   S + ++L+ KQ++
Sbjct: 1   MTNVTRARRQARLSRALGLPLTPKSVKYFEKRPYPPGEHGRARRRTESDYAVRLKEKQRL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG + EK+    + +A +  G T  +++  LE RLD +V RA F  T   ARQ V H
Sbjct: 61  RAQYG-LREKQMHRAYLDAKKEPGLTGESMVELLEMRLDALVLRAGFARTTLQARQAVVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDN 174
           RHVLV+G+ V+  S+R   G  I++K KS+ +     A++    DV    P Y+SV    
Sbjct: 120 RHVLVDGKLVDRPSFRVAPGQTIQIKPKSQAMEPFQIAAEGGNSDVLASTPSYLSVELPE 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + A  V  P   +    PV +   +VVE+Y+R
Sbjct: 180 LKAQLVSRPKRAE---VPVTVDVQMVVEYYAR 208


>gi|121761827|gb|ABM64999.1| ribosomal protein S4 [Plagiomnium integrum]
 gi|121761843|gb|ABM65007.1| ribosomal protein S4 [Plagiomnium integrum]
 gi|121761849|gb|ABM65010.1| ribosomal protein S4 [Plagiomnium integrum]
 gi|121761851|gb|ABM65011.1| ribosomal protein S4 [Plagiomnium integrum]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|49182803|gb|AAT57863.1| small ribosomal protein [Symphyogyna brongniartii]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G  L G     + + S         +K   S + ++L  KQK++ +YG ++E
Sbjct: 1   RAKIIRRLGA-LPGLSHEMIGSGSVYTNQLAANKK--ISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH++VN  +
Sbjct: 57  RQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIVVNDDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK  DVI ++ + +  + + +   L  ER +P +++ +      +  +I    
Sbjct: 117 VDIPSYNCKPQDVITIRDRRESQSVITQNISLFRERRIPNHLTFDSTRFCGSVNQIIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIGLKINELLVVEYYSR 193


>gi|3098202|gb|AAC15549.1| small ribosomal protein 4 [Tetraplodon mnioides]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSST---NQSTANKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN R 
Sbjct: 57  RQLLNYVRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|49182774|gb|AAT57849.1| small ribosomal protein [Symphyogyna sp. CD67]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG ++E
Sbjct: 1   RGKIIRRLGA-LPGLSXEMIGSRSGYINQLAANKK--ISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH++VN  +
Sbjct: 57  RQLLKYVRIARGAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVNDDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK  DVI ++ + +  + + +   L  ER +P +++ +      +  +I    
Sbjct: 117 VDIPSYNCKPQDVITIRDRRESQSVITKNINLFRERRIPNHLTFDSTRFCGSVNQIIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIGLKINELLVVEYYSR 193


>gi|24473832|gb|AAL82760.1| small ribosomal subunit protein 4 [Plagiobryum purpurascens]
          Length = 198

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIKRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SYRCK  D I +K + K    + +   L ++   P +++ N         +I 
Sbjct: 117 DRIVNIPSYRCKPEDSITIKDRQKSQTIISKNLNLYQKYKKPNHLTYNFLKKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|239932411|ref|ZP_04689364.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672]
 gi|291440777|ref|ZP_06580167.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672]
 gi|291343672|gb|EFE70628.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672]
          Length = 204

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A ++   T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-VSERQLVRAYERAAKTTMKTGDALVIELERRLDALVLRSGIARTIYQARQMVTHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG+ V+  S+R +  DV++V+ +SK       A +     + + P Y+ VN   +  
Sbjct: 119 IQVNGKKVDKPSFRVRPDDVVQVRDRSKDKTLFQIAREGGFAPDGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVEFY+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEFYAR 204


>gi|225550541|ref|ZP_03771490.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379695|gb|EEH02057.1| ribosomal protein S4 [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 202

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 12/209 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+   S +K  RR+G +L    K       R+YGPG HG  +K K S +G QL  KQK+
Sbjct: 1   MSRYTGSIYKKSRRLGFSLLENNKEFNSGKKRTYGPGQHGN-KKVKLSNYGQQLVEKQKL 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
              YG +++++FR +++ A    G  + NL+  LESRLD++VYRA F PT  AARQ VNH
Sbjct: 60  MFLYG-LNDRQFRRLYRVALGRPGVLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVA 177
            HVLVNG+ VNI S   + G  I +K+KS ++  +            ++I   + D  VA
Sbjct: 119 SHVLVNGKKVNIPSALVEVGSTIALKEKSLEMPLIKNTLNKPA----DFIELFDKDKKVA 174

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R+P   +    P  +    VVE+Y+R
Sbjct: 175 KLSRLPERSE---LPADVNEAYVVEWYNR 200


>gi|121761886|gb|ABM65028.1| ribosomal protein S4 [Orthomnion dilatatum]
          Length = 195

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++ ++P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYEIPNHLTYNSLNKKGLVNQILDRN 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|63191701|gb|AAY34812.1| small ribosomal protein subunit 4 [Pulchrinodus inflatus]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAIITKNIDFYQKYKIPNHLTYNSLKKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63191706|gb|AAY34814.1| small ribosomal protein subunit 4 [Plagiomnium cuspidatum]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I     
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIDLKINELLVVEYYSR 192


>gi|63191791|gb|AAY34855.1| small ribosomal protein subunit 4 [Tetrodontium brownianum]
          Length = 194

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K+P +   Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKVIRRLGVLPGLTIKTPQSKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILVNNHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  VP ++++N         ++   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQNIIAKNIDFSQKYKVPNHLTLNSSQKKGLINQV---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|227345121|gb|ACP28113.1| small ribosomal protein 4 [Chiloscyphus lentus]
          Length = 191

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|121761759|gb|ABM64966.1| ribosomal protein S4 [Plagiomnium affine]
 gi|121761761|gb|ABM64967.1| ribosomal protein S4 [Plagiomnium affine]
          Length = 195

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|145848877|emb|CAJ91115.1| ribosomal protein S4 [Acrocladium auriculatum]
          Length = 196

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            +  I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVSIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K K K  A + +  +  ++  +P +++ +         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|42556414|gb|AAS19802.1| small ribosomal protein 4 [Gackstroemia magellanica]
          Length = 191

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKILKLKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++      TI  ARQ VNHRH+ +N  +VNI 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMASTIPGARQLVNHRHISINNETVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I ++   K  + +        + ++P +++ +   +  +  +I        
Sbjct: 117 SYNCKPGDIITIRNSEKSQSIITTNMNSFHKSEIPNHLTFDSTQLRGSINKIIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VDLKVNELLVVEYYSR 189


>gi|83416504|gb|ABC18272.1| small ribosomal subunit protein 4 [Homalothecium sericeum]
          Length = 196

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   
Sbjct: 117 MVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|269123124|ref|YP_003305701.1| 30S ribosomal protein S4 [Streptobacillus moniliformis DSM 12112]
 gi|268314450|gb|ACZ00824.1| ribosomal protein S4 [Streptobacillus moniliformis DSM 12112]
          Length = 195

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R+  P         K + +G QLR KQK + 
Sbjct: 1   MARDRQPILKKCRTLGLDPSILGVNKKSKRNIRP-----NANKKLTEYGTQLREKQKARF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F  +++EA R  G T   L+ +LE RLD ++YR  F  T   ARQ V+H H
Sbjct: 56  VYG-VMEKQFYKLYEEATRKEGVTGELLLQYLERRLDNVIYRLGFGSTRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L+NG+ V+I SYR K+GDVI +K+ S +L+ + E+    ++ VP ++S+    + A  +
Sbjct: 115 ILINGKRVDIASYRVKQGDVITLKEGSTELSIIKESV--GQKSVPGWLSLEEGTLTAKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P+          +   +++EFYSR
Sbjct: 173 ENPTRDA---VDFEINEAMIIEFYSR 195


>gi|121761771|gb|ABM64972.1| ribosomal protein S4 [Plagiomnium succulentum]
 gi|121761773|gb|ABM64973.1| ribosomal protein S4 [Plagiomnium succulentum]
 gi|121761777|gb|ABM64975.1| ribosomal protein S4 [Plagiomnium succulentum]
          Length = 195

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|63078636|gb|AAY29404.1| ribosomal protein S4 [Tortella tortuosa]
          Length = 196

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
              +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PXVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFQIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|42556430|gb|AAS19810.1| small ribosomal protein 4 [Isotachis armata]
          Length = 191

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTLKQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD I V+ + K  + + +   L     +P +++ +   +     +  +      
Sbjct: 117 SYNCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLQGFVNQTINR---EL 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|28194669|gb|AAO33596.1|AF480951_1 ribosomal protein S4 [Didymodon luridus]
          Length = 196

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    +     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSNST---NQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +     ++  +P ++  N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFFQKSKIPNHLIFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|121761877|gb|ABM65024.1| ribosomal protein S4 [Plagiomnium confertidens]
          Length = 195

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|121761726|gb|ABM64950.1| ribosomal protein S4 [Plagiomnium ellipticum]
 gi|121761728|gb|ABM64951.1| ribosomal protein S4 [Plagiomnium ellipticum]
 gi|121761746|gb|ABM64960.1| ribosomal protein S4 [Plagiomnium ellipticum]
 gi|121761769|gb|ABM64971.1| ribosomal protein S4 [Plagiomnium ellipticum]
 gi|121761869|gb|ABM65020.1| ribosomal protein S4 [Plagiomnium ellipticum]
          Length = 195

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K +      + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|26421757|gb|AAN78137.1| ribosomal protein S4 [Tortula muralis]
 gi|26421759|gb|AAN78138.1| ribosomal protein S4 [Tortula muralis]
 gi|26421761|gb|AAN78139.1| ribosomal protein S4 [Tortula muralis]
 gi|26421763|gb|AAN78140.1| ribosomal protein S4 [Tortula muralis]
 gi|26421765|gb|AAN78141.1| ribosomal protein S4 [Tortula muralis]
 gi|26421767|gb|AAN78142.1| ribosomal protein S4 [Tortula muralis]
          Length = 195

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|63191883|gb|AAY34901.1| small ribosomal protein subunit 4 [Ganguleea angulosa]
          Length = 194

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CKNIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNRLV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SY CK  D I +K + K  A + +    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYCCKPQDFITIKDRQKSQALITKYIDFSQKSKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|157689508|gb|ABV65310.1| ribosomal protein S4 [Krameria lanceolata]
          Length = 193

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRPRAR----TDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V
Sbjct: 56  QLVKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDCIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  K K K    +      +   ++P+++++N         +I +S  
Sbjct: 116 DIPSYRCKPRDIITAKDKQKSRTLIQNYLDSSPHEELPKHLTINPLQYKGLVNQIIASK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --WVSLKINELLVVEYYSR 191


>gi|328541044|gb|AEB21746.1| ribosomal protein S4 [Hygrolembidium rigidum]
          Length = 195

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K       Y           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKILKPKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE R D  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQSLKYVRIARKAKGSTGQVSLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHIPINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +++K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIREKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSIDQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ESINLKINELLVVEYYSR 193


>gi|67035704|gb|AAY62783.1| small ribosomal protein subunit 4 [Schistidium apocarpum]
          Length = 194

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 HESIGLKINELLVVEYYSR 192


>gi|42556482|gb|AAS19836.1| small ribosomal protein 4 [Plagiochila asplenioides]
          Length = 191

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY           K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTLKSKSSYSD---RSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   VNI 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHITINNDIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|80974178|gb|ABB53782.1| small ribosomal subunit protein 4 [Ptychomniella ptychocarpa]
          Length = 198

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K +      + + +   ++  +P +++ +         +I 
Sbjct: 117 DYIVDIPSYRCKPQDFIIIKNQQNFEIVINKNTDFYQKYKIPNHLTYSSLEKKGLVNKI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|121761718|gb|ABM64946.1| ribosomal protein S4 [Plagiomnium rostratum]
          Length = 195

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|28194833|gb|AAO33678.1|AF481033_1 ribosomal protein S4 [Barbula ehrenbergii]
          Length = 196

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRLRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    V +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRKKSQVMVTKNLNFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|86438874|emb|CAJ55408.1| small ribosomal protein 4 [Plagiochila andina]
          Length = 192

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNH+H
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPN 198
            ++ +        + +   
Sbjct: 177 NQMINR---EWTNLKINEL 192


>gi|26421797|gb|AAN78157.1| ribosomal protein S4 [Tortula muralis]
          Length = 195

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|28194687|gb|AAO33605.1|AF480960_1 ribosomal protein S4 [Leptophascum leptophyllum]
          Length = 196

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K  A + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQAMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLEINELLVVEYYSR 194


>gi|24473828|gb|AAL82757.1| small ribosomal subunit protein 4 [Rhodobryum keniae]
          Length = 196

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKIPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPEDSITIKDRPKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|63078650|gb|AAY29411.1| ribosomal protein S4 [Triquetrella tristicha]
          Length = 197

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I  
Sbjct: 117 RIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDQESIGLKINELLVVEYYSR 195


>gi|11228633|gb|AAG33102.1| small ribosomal protein 4 [Dicranum condensatum]
          Length = 191

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|146261575|gb|ABQ15097.1| ribosomal protein S4 [Myriophyllum sp. Broch s.n.]
          Length = 190

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 9/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   MRRLGALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLL 55

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I 
Sbjct: 56  KYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIP 115

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D+I  K + K  A +     L+   ++P+++++          +I        
Sbjct: 116 SYRCKPRDIITAKDEQKSRAMIQNYLDLSPHEELPKHLTLQPFQYKGLVNQIIDKN---W 172

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 173 VGLKINELLVVEYYSR 188


>gi|49182702|gb|AAT57813.1| small ribosomal protein [Dumortiera hirsuta]
          Length = 194

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E+
Sbjct: 1   VKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L+N  +V
Sbjct: 57  QLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTSTIPGARQLVNHRHILINNNTV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY CK  DVI +K +SK  + + +     ++  +P +++ +   +     +I     
Sbjct: 117 DIPSYNCKPKDVITIKDRSKSQSIITKNLNSFQKQKIPNHLAFDLMQIKGIVNQIIDR-- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 -EWISLKINELLVVEYYSR 192


>gi|227345123|gb|ACP28114.1| small ribosomal protein 4 [Chiloscyphus leucophyllus]
          Length = 191

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQLLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  +I +      
Sbjct: 117 SYNCEPGDIITIRDKHKSQSMITKNINLFQKLKIPSHLTFDSIKLQGSVNQIINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|302561720|ref|ZP_07314062.1| 30S ribosomal protein S4 [Streptomyces griseoflavus Tu4000]
 gi|302479338|gb|EFL42431.1| 30S ribosomal protein S4 [Streptomyces griseoflavus Tu4000]
          Length = 204

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    ++ A ++   T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQLVRAYERAAKTSMKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG+ V+  S+R +  DV++V+++SK+      A +     + ++P Y+ VN  ++  
Sbjct: 119 IQVNGKKVDKPSFRVRPDDVVQVRERSKEKTLFTIAREGGFAPDGEIPRYLQVNLKSLAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204


>gi|227871775|ref|ZP_03990180.1| ribosomal protein S4 [Oribacterium sinus F0268]
 gi|227842376|gb|EEJ52601.1| ribosomal protein S4 [Oribacterium sinus F0268]
          Length = 197

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 15/209 (7%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+  +    K  R +G +    G  K                 + K S +GLQLR KQK 
Sbjct: 1   MAVDKVPVLKRCRSLGLDPVFLGVDKKSNRQLRNP--------RRKMSEYGLQLREKQKA 52

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + EK FR+ + +A++  G T  NL+  LESRLD +++R     T   ARQ V H
Sbjct: 53  KFIYGVL-EKPFRNYYAKAEKLAGQTGENLMVLLESRLDNVIFRMGMARTRREARQVVGH 111

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
           RHV VNG+ VNI SY    GDVI++K+  +      +  ++   R VP ++ ++ + + A
Sbjct: 112 RHVTVNGKIVNIPSYLVSAGDVIQIKESMRTAQRYKDIVEVTNGRMVPAWLEMDAEKLSA 171

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T   +P   +D+  PV     L+VE YS+
Sbjct: 172 TIKSLPHR-EDIDVPV--NEMLIVELYSK 197


>gi|157785980|gb|ABV74164.1| small ribosomal protein 4 [Dendrohypopterygium filiculiforme]
          Length = 196

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGALPGLTNKTPQLKSNL---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDY 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  + + +  +  ++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKNQRKSESIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKVNELLVVEYYSR 194


>gi|18920733|gb|AAL82411.1| ribosomal protein system 4 [Catagonium nitens]
          Length = 195

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67036088|gb|AAY62970.1| small ribosomal protein subunit 4 [Tripterocladium leucocladulum]
          Length = 194

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992451|gb|AAR06404.1| small ribosomal protein 4 [Camptochaete vaga]
          Length = 194

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|22854715|gb|AAN09777.1| small ribosomal protein 4 [Kiaeria starkei]
          Length = 191

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    +++    +++  VP +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQTMIIKNVDFSQKAKVPNHLTFHSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|37992569|gb|AAR06463.1| small ribosomal protein 4 [Lembophyllum divulsum]
          Length = 194

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|18920759|gb|AAL82424.1| ribosomal protein system 4 [Orthothecium chryseum]
          Length = 194

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|18920739|gb|AAL82414.1| ribosomal protein system 4 [Herzogiella cylindricarpa]
          Length = 197

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN  
Sbjct: 58  ERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILVNDC 117

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   
Sbjct: 118 IVDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI--- 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 175 LDRESIGLKINELLVVEYYSR 195


>gi|20531120|gb|AAM27380.1| ribosomal protein 4 [Timmia megapolitana]
          Length = 191

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNDHIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|160941043|ref|ZP_02088381.1| hypothetical protein CLOBOL_05936 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435992|gb|EDP13759.1| hypothetical protein CLOBOL_05936 [Clostridium bolteae ATCC
           BAA-613]
          Length = 197

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R        +R   K S +G+QLR KQK K 
Sbjct: 1   MAVDRVPVLKRCRSLGLDPIYLGIDKKSNRES------KRTNKKLSEYGMQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A +  G    NL+  LE RLD +++R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKASKMNGMVGTNLMILLECRLDNVLFRMGLGRTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI SYR K GDVIEVK+K K      +  +    R VP ++ V+ +N+  T 
Sbjct: 114 ILVNGKPVNIPSYRVKAGDVIEVKEKYKSAQRYKDVLEVTGGRMVPAWLDVDQENLRGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KEMPTRDE---IDVPVNEMLIVELYSK 197


>gi|33413193|emb|CAD86732.1| ribosomal protein small subunit 4 [Dicranum fuscescens]
          Length = 191

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKFKIPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|17025814|gb|AAL32074.1| ribosomal protein 4 [Syrrhopodon trachyphyllus]
          Length = 198

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLSGLTNKTPQLKSSS---INQSTSSKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D I +K + K    +++ +   ++   P ++  N         +I 
Sbjct: 117 NRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTSFFSKHKTPNHLIFNSVEKKGFVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDHESIGLKINELLVVEYYSR 196


>gi|28194799|gb|AAO33661.1|AF481016_1 ribosomal protein S4 [Tortula muralis]
          Length = 196

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI R +G       K P          +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRPLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|28194741|gb|AAO33632.1|AF480987_1 ribosomal protein S4 [Pottia pallida]
          Length = 196

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGALPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I + ++ K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|26421809|gb|AAN78163.1| ribosomal protein S4 [Tortula muralis]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DPESIGLKINELLVVEYYSR 193


>gi|42556448|gb|AAS19819.1| small ribosomal protein 4 [Lepidolaena clavigera]
          Length = 191

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGTLPGLTSKKIKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHILINNETVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ + K  + + +      + ++P ++++N   +  +            
Sbjct: 117 SYNCEPGDIITIRNREKSQSIITKNINSFHKSEIPNHLTLNSTQLRGSINTTIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKVNELLVVEYYSR 189


>gi|228480563|gb|AAY62914.2| small ribosomal protein subunit 4 [Loeskeobryum brevirostre]
          Length = 194

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D J +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFJTIKNQQKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|121761712|gb|ABM64943.1| ribosomal protein S4 [Plagiomnium undulatum]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INPSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLKKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|37992511|gb|AAR06434.1| small ribosomal protein 4 [Euptychium robustum]
          Length = 198

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITEQQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTISGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I VK +      + +     ++  +P +++           +I 
Sbjct: 117 DCIVNIPSYRCKPQDFIIVKNEKNSEEVINKDGDFHQKSKIPNHLTYIFLEKKGLVNKI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|49182799|gb|AAT57861.1| small ribosomal protein [Sphaerocarpos texanus]
          Length = 192

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+      Y   ++      K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGALPGLTNKTLKTKSGY---INQSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I
Sbjct: 57  LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNTVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK  DVI +K + K  + + +     ++  +P ++S +         +I       
Sbjct: 117 PSYSCKPKDVITIKDRQKSQSIITKNINSFQKPKIPNHLSFDLIQFKGLVNQIIDR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIYLKINELLVVEYYSR 190


>gi|28194835|gb|AAO33679.1|AF481034_1 ribosomal protein S4 [Barbula indica]
 gi|28194837|gb|AAO33680.1|AF481035_1 ribosomal protein S4 [Barbula ehrenbergii]
 gi|28194839|gb|AAO33681.1|AF481036_1 ribosomal protein S4 [Barbula ehrenbergii]
          Length = 196

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKTPHLKSSS---INQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    V +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPEDFITIKDRKKSQVMVTKNLNFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|157785984|gb|ABV74166.1| small ribosomal protein 4 [Hypopterygium didictyon]
          Length = 196

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG 
Sbjct: 57  ERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNGY 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFINIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LNRESIGLKINELLVVEYYSR 194


>gi|222103412|gb|ACM44235.1| small ribosomal protein subunit 4 [Tetraphis pellucida]
 gi|222103414|gb|ACM44236.1| small ribosomal protein subunit 4 [Tetraphis pellucida]
          Length = 194

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLKYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P ++++N         ++   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 REFIDLKINELLVVEYYSR 192


>gi|20531092|gb|AAM27367.1| ribosomal protein 4 [Muscoflorschuetzia pilmaiquen]
          Length = 191

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++    
Sbjct: 3   RLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 59  VRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RC+  D I +K + K    +++    +++  +P +++ +         +I   L      
Sbjct: 119 RCQPQDFITIKDRQKSQGIIVKNMDFSQKYKIPNHLTFDSLEKKGVVNQI---LDRESIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|67035730|gb|AAY62796.1| small ribosomal protein subunit 4 [Physcomitrella patens]
          Length = 186

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S       Q    K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V+I SYRC
Sbjct: 56  IARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I VK + K  A + +    +++  VP +++ +         +I   L      + 
Sbjct: 116 KPEDSITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTQKKGLVNQI---LDRESIGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|11228662|gb|AAG33116.1| small ribosomal protein 4 [Pleuridium acuminatum]
 gi|33413217|emb|CAD86743.1| ribosomal protein small subunit 4 [Pleuridium acuminatum]
          Length = 190

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQKSQAMIIKNIDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|227345113|gb|ACP28109.1| small ribosomal protein 4 [Archeophylla schusteri]
          Length = 191

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++   
Sbjct: 2   RRLGALPGLISKTLKLKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +N   V+I S
Sbjct: 58  YVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHGHISINNFIVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C  GDVI V+ K K  + + +   L +  ++P +++++   +  +  +  +       
Sbjct: 118 YNCAPGDVITVRNKQKSRSIITKNINLLQNSEIPNHLTLDSTQLRGSINQTINR---EWI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 HLKINELLVVEYYSR 189


>gi|26421773|gb|AAN78145.1| ribosomal protein S4 [Tortula muralis]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P          +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLSNKIPPLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSKVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|18920779|gb|AAL82434.1| ribosomal protein system 4 [Platydictya jungermannioides]
          Length = 194

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  +++ +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEAIISKNIEFYQKNKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|3098152|gb|AAC15524.1| small ribosomal protein 4 [Ptychomitrium gardneri]
          Length = 194

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A V++    ++   VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKARQKSQAMVIKNVDFSQNYKVPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 HGSIGLKINELLVVEYYSR 192


>gi|67035863|gb|AAY62858.1| small ribosomal protein subunit 4 [Potamium lonchophyllum]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G  L    K+P    S    ++      K S + ++L  KQK++ YYG I+E+
Sbjct: 2   VKIIRRLGTLLGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFYYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 58  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNSMV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  E+  +P +++ N         +I   L 
Sbjct: 118 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYEKSKIPNHLTYNSLEKKGLINKI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIGLKINELLVVEYYSR 193


>gi|63101063|gb|AAY33156.1| small ribosomal protein 4 [Pilotrichopsis dentata]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VNIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|20531109|gb|AAM27375.1| ribosomal protein 4 [Bryum caespiticium]
          Length = 193

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 2   IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I
Sbjct: 58  LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +     ++  +P +++ N  N       I   L   
Sbjct: 118 PSYRCKPQDFITIKDQQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNXI---LDRE 174

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 175 SIDLKINELLVVEYYSR 191


>gi|121761714|gb|ABM64944.1| ribosomal protein S4 [Plagiomnium insigne]
 gi|121761716|gb|ABM64945.1| ribosomal protein S4 [Plagiomnium insigne]
 gi|121761720|gb|ABM64947.1| ribosomal protein S4 [Plagiomnium insigne]
 gi|121761740|gb|ABM64957.1| ribosomal protein S4 [Plagiomnium insigne]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|67035622|gb|AAY62742.1| small ribosomal protein subunit 4 [Dicnemon seriatum]
          Length = 194

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A  ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A +++    +++  VP +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|118626057|emb|CAL41749.1| small ribosomal protein 4 [Southbya gollanii]
          Length = 192

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQ+++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTSKTLKLKSSY---IDRSVSNKKVSQYRIRLEEKQRLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+ +N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQSVNHGHISINNSIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I V+ K K  + + +   L ++ + P +++ +   +  +  +  +      
Sbjct: 117 SYDCEPGDIITVRNKRKSQSVITKNINLFKKLETPSHLTFDSTELRGSVDQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|18920771|gb|AAL82430.1| ribosomal protein system 4 [Plagiothecium latebricola]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|121761754|gb|ABM64964.1| ribosomal protein S4 [Plagiomnium elatum]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I +  
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILNRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|37960605|gb|AAP70672.1| small ribosomal protein 4 [Flatbergium sericeum]
          Length = 195

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +   Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTNKTPQSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  + +  +   ++    P +++++         +I     
Sbjct: 118 NIPSYRCKPRDFITIKDRQKSRSIITRSLDYSQSYKTPNHLTLDSLQKKGLVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|224179500|ref|YP_002601030.1| ribosomal protein S4 [Monomastix sp. OKE-1]
 gi|217314543|gb|ACK36886.1| ribosomal protein S4 [Monomastix sp. OKE-1]
          Length = 208

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G+       +  + ++  PG HG  R  K S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLRITRRLGDLPGLVNTAKSSGKTTLPGQHGGSRPQKASQYSIRLKEKQKLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E +     K+A   +G T   ++  LE RLD+IV+R+   PT+ AARQ V+H H
Sbjct: 61  NYG-VNESQLVRYVKKARNMKGSTGELVLQLLEMRLDSIVFRSGLAPTLRAARQLVSHGH 119

Query: 121 VLVNGR-----------SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
           + +  +            VNI SY+C+ GD + +       A        +   +P +I 
Sbjct: 120 IAIETKTSQNKTENSFLPVNIPSYQCRPGDNVRLINLPTGEAR-------SSTSLPAHIH 172

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ +      ++    +       +   L++E+YSR
Sbjct: 173 FDNASKSYQVKQLIPRSE---VSCSVNELLIIEYYSR 206


>gi|37992611|gb|AAR06484.1| small ribosomal protein 4 [Orthostichella pentasticha]
          Length = 192

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG  V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNGCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|18920799|gb|AAL82444.1| ribosomal protein system 4 [Trachythecium verrucosum]
          Length = 197

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 57

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 58  ERQLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 117

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I  YRCK  D+I +K + K    + +  +  +R  +P +++ +         +I   
Sbjct: 118 IVDISGYRCKPQDLITIKNQQKSETIINKNIEFYQRFKIPNHLTYSSLEKKGLVNQILDR 177

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   L+VE+YSR
Sbjct: 178 Q---SIGLKINELLIVEYYSR 195


>gi|47606908|gb|AAT36374.1| ribosomal protein subunit 4 [Leptotheca gaudichaudii]
          Length = 194

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIINKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|328488176|gb|AEB19901.1| small ribosomal protein 4 [Schistochila lehmanniana]
          Length = 191

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKTPKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKQKSQSMITRNLNLLQKPKIPNHLTFDPTQLRGLVNQ---RVHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|7576773|gb|AAF63983.1| small ribosomal protein 4 [Polytrichadelphus magellanicus]
          Length = 192

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI
Sbjct: 57  LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D + +K + +  A +      +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFVTIKNRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LNRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|283781653|ref|YP_003372408.1| 30S ribosomal protein S4 [Pirellula staleyi DSM 6068]
 gi|283440106|gb|ADB18548.1| ribosomal protein S4 [Pirellula staleyi DSM 6068]
          Length = 202

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++    K +++RR+G  ++        +  R   PG+H + R+   S +G+    KQK+
Sbjct: 1   MARYHGPKARVNRRLGALIYEAAGAARALERRDNPPGMHIKGRR--LSNWGMASAEKQKI 58

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K YYG + E++ R  +      +G+T   L++  E RLD +V RA +  T   ARQ + H
Sbjct: 59  KHYYG-LGERQLRKYYHMVAAKKGNTGEQLLTLCERRLDNVVRRAGYTKTRPQARQGIVH 117

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  VNG  V   SY+ + GDVI ++ K                  PE+++ + +++ AT
Sbjct: 118 GHFFVNGVKVTSPSYQLRPGDVITIRPKEAIYGLYKGVCDNHAPQTPEWLTFDSESLRAT 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + IP    D   PV +    VVEF SR
Sbjct: 178 MMGIPGPG-DYSLPVNVDI--VVEFLSR 202


>gi|239623374|ref|ZP_04666405.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522340|gb|EEQ62206.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 197

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R        +R   K S +G+QLR KQK K 
Sbjct: 1   MAVDRVPVLKRCRSLGLDPVYLGIDKKSNRES------RRTNKKLSEYGMQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A +  G    NL+  LE RLD +++R     T    RQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKASKMNGMVGTNLMILLECRLDNVLFRMGLGRTRKETRQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI SY+ K GDVIEV++K K      +  +    R  P ++ V+ +N+  T 
Sbjct: 114 ILVNGKPVNIPSYQVKAGDVIEVREKYKSAQRYKDILEVTGGRLTPAWLEVDQENLRGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KEMPTRDE---IDVPVNEMLIVELYSK 197


>gi|63101045|gb|AAY33147.1| small ribosomal protein 4 [Baldwiniella kealeensis]
          Length = 194

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLKKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035664|gb|AAY62763.1| small ribosomal protein subunit 4 [Trichodon cylindricus]
          Length = 194

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNVNFSQKSKVPNHLTFNSLENKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|50235324|gb|AAT70695.1| Rps4 [Plasteurhynchium meridionale]
          Length = 195

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|160932173|ref|ZP_02079564.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753]
 gi|156868775|gb|EDO62147.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753]
          Length = 200

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K      K    +G +    G  K   N         G + + K   + LQL  KQK+
Sbjct: 1   MAKNMQPIAKRCHALGISPTVMGYSKKTTNRNP------GGQMRKKKGEYALQLAEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I E++FRS +++A R  G    NL+  +E RLD +VYR  F  T   ARQ VNH
Sbjct: 55  KFVYG-ILERQFRSYYEKATRMPGKAGENLLILVERRLDNVVYRLGFASTRRDARQLVNH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176
            H  VNG+ VNI SY  K GDVIEV + S+      +          VP ++     ++ 
Sbjct: 114 GHFTVNGKRVNIPSYLVKPGDVIEVAETSRSSVKFSKLTGEDAPMVTVPRWLEREKSSLK 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P+  +D+  PV  + +L+VE YS+
Sbjct: 174 GVVAAMPAR-EDIDLPV--EEHLIVELYSK 200


>gi|151370786|gb|ABS11011.1| ribosomal protein subunit 4 [Dendro-hypnum reinwardtii]
          Length = 194

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G  L    K+     S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 2   KIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+
Sbjct: 58  LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVD 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L  
Sbjct: 118 IPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI---LDR 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   L+VE+YSR
Sbjct: 175 ESIGLKINELLIVEYYSR 192


>gi|78102639|gb|ABB21533.1| small ribosomal protein 4 [Plagiochila cymbiformis]
 gi|78102645|gb|ABB21536.1| small ribosomal protein 4 [Plagiochila duricaulis]
 gi|78102683|gb|ABB21555.1| small ribosomal protein 4 [Plagiochila latifrons]
          Length = 189

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|20531059|gb|AAM27352.1| ribosomal protein 4 [Buxbaumia piperi]
          Length = 193

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K P     Y    +      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KIIRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VN
Sbjct: 57  LLKYVRIARAAKGSTGQILLQSLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNHIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K   K    + +  +L++R  +P ++++N         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNSQKSPTIITKNIELSQRYQIPNHLTLNSLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|63191685|gb|AAY34804.1| small ribosomal protein subunit 4 [Leptodictyum riparium]
 gi|63191687|gb|AAY34805.1| small ribosomal protein subunit 4 [Warnstorfia exannulata]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    L+      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|227345117|gb|ACP28111.1| small ribosomal protein 4 [Chiloscyphus austrigenus]
          Length = 191

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDLIKLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|22854703|gb|AAN09771.1| small ribosomal protein 4 [Distichium capillaceum]
          Length = 189

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A +++  + +++  VP +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIIIKNIEFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|49182805|gb|AAT57864.1| small ribosomal protein [Targionia hypophylla]
          Length = 195

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N   
Sbjct: 57  RQLVKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNP 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SY CK  D+I +K + K    + +     ++  +P +++ +   +     +I    
Sbjct: 117 IDIPSYNCKPKDIITIKDRPKSKLIITKNLNSFQKQKIPNHLTFDLVQVKGLVNQIIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIYLKINELLVVEYYSR 193


>gi|42556490|gb|AAS19840.1| small ribosomal protein 4 [Ptilidium pulcherrimum]
          Length = 191

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +VNI 
Sbjct: 57  KYVCIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K + K  + +     L ++  +P +++ +   +  +  ++        
Sbjct: 117 SYNCKPGDIITIKNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSVNQMIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IHLKINELLVVEYYSR 189


>gi|17025851|gb|AAL32091.1| ribosomal protein 4 [Mitthyridium sp. Wall 3637]
          Length = 199

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           ++ KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++
Sbjct: 4   ARVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LT 59

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN  
Sbjct: 60  ERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNN 119

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   
Sbjct: 120 IVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI--- 176

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 177 LDHESIGLKINELLVVEYYSR 197


>gi|27227947|gb|AAN85771.1| ribosomal protein subunit 4 [Plagiobryum orthothecium]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67036066|gb|AAY62959.1| small ribosomal protein subunit 4 [Gollania philippinensis]
          Length = 195

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67035746|gb|AAY62804.1| small ribosomal protein subunit 4 [Polymerodon andinus]
          Length = 197

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGXLPGLTXKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGZVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNB 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
           R VBI SYRCK  D I  K + K    + +     ++   P +++ N         +I  
Sbjct: 117 RXVBIPSYRCKPQDFITXKDRQKSQXXIXKNIDFYQKYKXPNHLTXNSLXKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDXESIXLKINELLVVEYYSR 195


>gi|63101069|gb|AAY33159.1| small ribosomal protein 4 [Muellerobryum whiteleggei]
          Length = 195

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|293634047|gb|ADE60403.1| ribosomal protein subunit 4 [Pogonatum nipponicum]
          Length = 191

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|28194681|gb|AAO33602.1|AF480957_1 ribosomal protein S4 [Syntrichia ammonsiana]
          Length = 195

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S+    +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKIPHLKSSFT---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 NQESIGLKINELLVVEYYSR 193


>gi|328541064|gb|AEB21756.1| ribosomal protein S4 [Kurzia trichoclados]
          Length = 198

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR G       K+      Y           K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRXGGXPGLXSKTVKQKSGY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMASTIPXARQLVNHRHISINX 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+  D+I +++K K  + V +   L +   +P +++ +   +  +  +  +
Sbjct: 117 DIVDIPSYNCEPDDIITIREKQKSQSVVTKNINLFQNLKIPSHLTFDSIKLCGSINQTIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---ESIDLKINELLVVEYYSR 195


>gi|28194729|gb|AAO33626.1|AF480981_1 ribosomal protein S4 [Syntrichia ruralis]
 gi|28194829|gb|AAO33676.1|AF481031_1 ribosomal protein S4 [Syntrichia intermedia]
 gi|33413245|emb|CAD86757.1| ribosomal protein small subunit 4 [Syntrichia ruralis]
          Length = 196

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|63101057|gb|AAY33153.1| small ribosomal protein 4 [Symphysodon longicuspis]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K    + +  +  ++  +P +++ ++        +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETMISKNIEFYQKYKIPNHLTYSYLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|309785618|ref|ZP_07680249.1| ribosomal protein S4 [Shigella dysenteriae 1617]
 gi|308926738|gb|EFP72214.1| ribosomal protein S4 [Shigella dysenteriae 1617]
 gi|313647394|gb|EFS11846.1| ribosomal protein S4 [Shigella flexneri 2a str. 2457T]
 gi|323164860|gb|EFZ50651.1| ribosomal protein S4 [Shigella sonnei 53G]
 gi|332086274|gb|EGI91430.1| ribosomal protein S4 [Shigella dysenteriae 155-74]
          Length = 154

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/158 (41%), Positives = 100/158 (63%), Gaps = 5/158 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QLR KQK+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T 
Sbjct: 1   MQLREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATR 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168
             ARQ V+H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++
Sbjct: 60  AEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWL 119

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+   M  TF R P           +  +L+VE YS+
Sbjct: 120 EVDAGKMEGTFKRKPERSD---LSADINEHLIVELYSK 154


>gi|33413201|emb|CAD86736.1| ribosomal protein small subunit 4 [Paraleucobryum longifolium]
          Length = 191

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|29027204|gb|AAN47164.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027206|gb|AAN47165.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027208|gb|AAN47166.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027210|gb|AAN47167.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027212|gb|AAN47168.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027214|gb|AAN47169.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027216|gb|AAN47170.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027218|gb|AAN47171.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027222|gb|AAN47173.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027224|gb|AAN47174.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027226|gb|AAN47175.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027228|gb|AAN47176.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027230|gb|AAN47177.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027232|gb|AAN47178.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027234|gb|AAN47179.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027236|gb|AAN47180.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027238|gb|AAN47181.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIGKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|327479347|gb|AEA82657.1| 30S ribosomal protein S4 [Pseudomonas stutzeri DSM 4166]
          Length = 167

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/172 (38%), Positives = 103/172 (59%), Gaps = 6/172 (3%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           +HGQ R+ + S +G QLR KQK+++ YG + E++F   +KEA   +G T  NL+  LE R
Sbjct: 1   MHGQ-RRGRLSDYGTQLREKQKVRRIYGVL-ERQFSGYYKEAASRKGATGENLLQLLECR 58

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +VYR  F  T   +RQ V+H+ + VNG++VNI SY+ K GDV+ V++K +    + +
Sbjct: 59  LDNVVYRMGFGSTRAESRQLVSHKSITVNGQTVNIPSYQVKAGDVVAVREKCRNQLRIAQ 118

Query: 156 ASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A +L A+R   E++ V+ D     F  +P+          +  NL+VE YS+
Sbjct: 119 ALELCAQRGRVEWVEVDADKKSGVFKNVPARSD---LSADINENLIVELYSK 167


>gi|118626033|emb|CAL41743.1| small ribosomal protein 4 [Barbilophozia attenuata]
          Length = 191

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+ FLE RLD  ++R    PTI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMAPTIPGARQLVNHRHISVNNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + V +   L ++  +P +++ +   +  +  +  +      
Sbjct: 117 SYNCEPGDIITIRSKQKSQSIVTKNINLFQKLKIPSHLTFDLTQLRGSVNQTVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVV +YSR
Sbjct: 174 VNLKINELLVVXYYSR 189


>gi|302550146|ref|ZP_07302488.1| ribosomal protein S4 [Streptomyces viridochromogenes DSM 40736]
 gi|302467764|gb|EFL30857.1| ribosomal protein S4 [Streptomyces viridochromogenes DSM 40736]
          Length = 204

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A + +G T   LI  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-VSERQLVRAYERASKVQGKTGEALIIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG+ V+  S+R +  DV++V+ +SK+      A +     + + P Y+ VN   +  
Sbjct: 119 IAVNGKKVDKPSFRVRPDDVVQVRDRSKEKTLFTIAREGGFAPDGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204


>gi|37992721|gb|AAR06539.1| small ribosomal protein 4 [Weymouthia cochlearifolia]
          Length = 195

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    +       K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---IXQSPSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|18920749|gb|AAL82419.1| ribosomal protein system 4 [Isopterygium albescens]
          Length = 196

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I +K + K    + +  +  +R  +P +++ +         +I   
Sbjct: 117 IVDISSYRCKPQDLITIKNQQKSETIINKNIEFYQRSKIPNHLTYSSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|59803307|gb|AAX07762.1| Rps4 [Noteroclada confluens]
          Length = 192

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K   +   Y   ++      K S + ++L  KQK++ +YG ++E++  
Sbjct: 3   IRRLGVLPGLTSKIVESKSGY---INQPTSSKKVSQYRIRLEEKQKLRFHYG-LTERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 59  KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHILINDNMVDIP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY C+ GDVI VK + +  + + +  +     +P ++++N      +  ++ +       
Sbjct: 119 SYNCEPGDVITVKNRRESQSIIAKNMEFQRPKIPNHLTLNSIQFQGSVNQVINR---ECI 175

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 176 DLKINELLVVEYYSR 190


>gi|78369641|gb|ABB43050.1| ribosomal protein 4 [Calymperes erosum]
          Length = 198

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N
Sbjct: 57  LTERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D I +K + K    +++   +  +  +P +++ N         +I 
Sbjct: 117 NRIVNIPSYQCKPQDFITLKDQQKYQTMIVKNINVYPKYKIPSHLTFNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|63101073|gb|AAY33161.1| small ribosomal protein 4 [Phyllodon truncatulus]
          Length = 198

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N     A    I 
Sbjct: 117 DCIVDIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKSKIPNHLTYNFLEKKALVNEI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|41323083|gb|AAR99771.1| small ribosomal protein 4 [Herbertus subdentatus]
          Length = 188

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K   +  SY   +       K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY 
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIPSYN 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +  +        +
Sbjct: 117 CEPGDIITIKNKQKSQSIITKNISLFQKFKIPSHLTFDSTKLHGSINQTINR---EWINL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|18920793|gb|AAL82441.1| ribosomal protein system 4 [Taxiphyllum deplanatum]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++ ++P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSEIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|121761837|gb|ABM65004.1| ribosomal protein S4 [Plagiomnium confertidens]
          Length = 195

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|33413195|emb|CAD86733.1| ribosomal protein small subunit 4 [Dicranum tauricum]
          Length = 191

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYIRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|12330510|gb|AAG52792.1| ribosomal protein 4 [Ditrichum pallidum]
          Length = 189

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A +++    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIIIKNIDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|118577542|gb|ABL07137.1| small ribosomal protein 4 [Peperomia galioides]
          Length = 186

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K PV+  S    L  Q R  K S + ++L  KQK++ +YG + E++     +
Sbjct: 1   GALPGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I ++   K    V  +   A R ++P++++++         +I  S       + 
Sbjct: 116 KPRDIITMRNAQKSKVLVQNSMDSASREELPKHLTLDSSQYKGIVNQIIDSK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|89147838|gb|ABD62767.1| ribosomal protein 4 [Podomitrium malaccense]
          Length = 202

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 8/205 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++    + KI RR+G       K   +  SY    +      K S + ++L  KQK++ +
Sbjct: 2   ARYRGPRTKIIRRLGALPGLSYKMLGSKSSYT---NRLTTNRKISQYRIRLEEKQKLRFH 58

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A  ++G T   L+  LE RLD IV+R    PTI AARQ VNHRH+
Sbjct: 59  YG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHI 117

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFV 180
           +++  +VNI SY CK G+VI +K + +  + + +   L  E+ +P +++ +      +  
Sbjct: 118 VIDENTVNIPSYNCKPGEVITIKNRRESQSIITKNVNLFREQRIPNHLTFDSTRFYGSVN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
           +I          + +   LV E+YS
Sbjct: 178 QIIDR---ECISLKINELLVXEYYS 199


>gi|12642236|gb|AAK00200.1| rps4 [Aphanorrhegma serratum]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S       Q    K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGVLPGLTNKTPQLKSSSA----NQSTAKKISQYRIRLEEKQKLRFHYG-ITE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNH HVLVN   
Sbjct: 56  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHXHVLVNDCI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SYRCK  D I VK + K  A + +    +++  VP +++ +         +I   L
Sbjct: 116 LDIPSYRCKPEDXITVKNRQKSQAIITKNIDFSQKSKVPNHLTFDSTXKKGLVNQI---L 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+ SR
Sbjct: 173 HRESIGLKINELLVVEYNSR 192


>gi|16565395|gb|AAL26212.1|AF313612_1 small ribosomal protein 4 [Pinus thunbergii]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K P N +        +    K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H+ VN   
Sbjct: 56  RQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGHIRVNDHM 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +         +I  S 
Sbjct: 116 VDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFINQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WINLKINELLVVEYYSR 192


>gi|63100993|gb|AAY33121.1| small ribosomal protein 4 [Spiridentopsis longissima]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035720|gb|AAY62791.1| small ribosomal protein subunit 4 [Syrrhopodon texanus]
          Length = 194

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG ++E+
Sbjct: 1   VKIIRRLGTLXGLTNKIPQLKSSS---INQSTSNKKTSQYRIRLEEKQKLRFHYG-LTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SY+CK  D I +K + K    +++    + +  +P +++ N         +I   L 
Sbjct: 117 NIPSYQCKPQDFITLKDQQKYQTMIIKNVNFSPKYKIPSHLTFNSVEKKGLVTQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKVNELLVVEYYSR 192


>gi|42794732|gb|AAS45761.1| Rps4 [Vaccinium poasanum]
          Length = 211

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K   S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTRNSRRTQSRXVKKK--KSQYHIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ V HRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLXIKELLVVEYYSR 207


>gi|328541174|gb|AEB21811.1| ribosomal protein S4 [Telaranea pulcherrima var. mooreana]
          Length = 196

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K+     SY           K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVXRRLGALPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  + R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRPDNTILRLGMASTIPGARQLVNHRHISINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDLITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDSIKLCGSIDQTINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIDLKINELLVVEYYSR 193


>gi|49182776|gb|AAT57850.1| small ribosomal protein [Petalophyllum ralfsii]
          Length = 195

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G           +  SY   ++      K S + ++L  KQK++ +YG ++E
Sbjct: 1   RAKVIRRLGALPGLTDGILASKFSY---INRSASSKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNH H+ ++G +
Sbjct: 57  RQLLRYVRIAREAKGSTGRVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIAIDGNT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY  K GDVI +K + +  + +      +++  +P +++++      +  ++    
Sbjct: 117 VDIPSYNRKPGDVITIKNRRESQSIITRNMSSSQKPKIPNHLTLDSAQFRGSVDQVIDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---WMNLKINELLVVEYYSR 193


>gi|37992479|gb|AAR06418.1| small ribosomal protein 4 [Cyathophorella tonkinensis]
          Length = 194

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNQQKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|21914172|gb|AAM81308.1| ribosomal protein subunit 4 [Bryum pseudotriquetrum]
          Length = 196

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           ++ +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   ARVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESIGLKINELLVVEYYSR 194


>gi|121761875|gb|ABM65023.1| ribosomal protein S4 [Plagiomnium maximoviczii]
          Length = 195

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|121761820|gb|ABM64996.1| ribosomal protein S4 [Plagiomnium maximoviczii]
          Length = 195

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SINLKINELLVVEYYSR 193


>gi|111115445|ref|YP_710063.1| 30S ribosomal protein S4 [Borrelia afzelii PKo]
 gi|122956337|sp|Q0SMP1|RS4_BORAP RecName: Full=30S ribosomal protein S4
 gi|110890719|gb|ABH01887.1| ribosomal protein S4 [Borrelia afzelii PKo]
          Length = 208

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 119/210 (56%), Gaps = 8/210 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++++ +K K+ RR G N++ +PK    +  + + PG+HG+ RK+K + +G QL  KQK+
Sbjct: 1   MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKI 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG +SE++  + FKEA +  G T +NL+S LE+ +D IVYRA F  +   AR  V+H
Sbjct: 61  KFTYG-VSERQLPNTFKEAKKHHGVTGYNLLSILETIIDNIVYRAGFAFSRAHARLIVSH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMV 176
             V++NGR V I S   +  D I +++       +    +   A+R++P  I +N D + 
Sbjct: 120 GIVILNGRRVTIPSIILRANDQILIQEIDSLKKLIGSNIEQTSAQRNLPTGIELNADYLN 179

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 PS  +    P +    +VVE+YS+
Sbjct: 180 IKVKHAPSRDE---IPTLANEQMVVEYYSK 206


>gi|67036104|gb|AAY62978.1| small ribosomal protein subunit 4 [Hylocomiopsis cylindracarpa]
          Length = 194

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I  K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITTKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|147669123|ref|YP_001213941.1| 30S ribosomal protein S4 [Dehalococcoides sp. BAV1]
 gi|146270071|gb|ABQ17063.1| SSU ribosomal protein S4P [Dehalococcoides sp. BAV1]
          Length = 197

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 13/202 (6%)

Query: 12  DRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
            RR G+ L+ +      K     R   PG   G+ R+   S  G QLR KQ ++  YG +
Sbjct: 2   CRRSGDKLFLKGDKCVTKCVFEKRPKPPGPQLGRPRR--LSDRGQQLRQKQSIRWSYG-M 58

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++FR  F  A+   G T  N++  LE RLD +++R  F  +   ARQ V H H+LVNG
Sbjct: 59  TERQFRRFFGLANAQPGVTGDNMMILLERRLDNVLFRLGFGTSRAQARQIVMHGHILVNG 118

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPS 184
           +  +I SY  KEG  I V++ SK  A     ++  E + +P ++S++   +    + +P+
Sbjct: 119 QKTDIPSYLIKEGQEITVRETSKATAYFKTLAENIEAKAIPGWLSLDRKTLSGKVISLPN 178

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           +              VVE+YSR
Sbjct: 179 AGD---IDARFDAQTVVEYYSR 197


>gi|22854687|gb|AAN09763.1| small ribosomal protein 4 [Chorisodontium mittenii]
          Length = 190

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++    +++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|42794648|gb|AAS45721.1| Rps4 [Disterigma alaternoides]
          Length = 211

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRNRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|7576769|gb|AAF63981.1| small ribosomal protein 4 [Pogonatum contortum]
          Length = 191

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---INQTISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A + +    +++  +P +++ N         +I        
Sbjct: 117 SYRCKPQDFITIKNRQESQAIITKNIDFSQKYKIPNHLTFNSLEKKGLVNQILDRD---S 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|227345131|gb|ACP28118.1| small ribosomal protein 4 [Chiloscyphus sp. XHN-2009]
          Length = 191

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNKHKSQSIITKNINLFQKLKIPSHLTFDLIKLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|63191877|gb|AAY34898.1| small ribosomal protein subunit 4 [Eucladium verticillatum]
          Length = 194

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLSNKTPHLKFSST---NQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 SIPSYRCKPQDFIXIKDRQKSXIMITKNVDFSQKSKIPNHLTFNSIEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|116008993|gb|ABJ52165.1| ribosomal protein S4 [Phyllostachys edulis]
          Length = 198

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 9/202 (4%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ +Y
Sbjct: 1   RYRGPRFKKIRRLGALPGLTRKTP----KSGSNLKKKFHSGKKEQYRIRLQEKQKLRFHY 56

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+L
Sbjct: 57  G-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRHIL 115

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVR 181
           VN R V+I S+RCK  D+I  K   +    V  +   ++   +P++++++         +
Sbjct: 116 VNRRIVDIPSFRCKPRDIITTKDNQRSKCLVQNSIASSDPGKLPKHLTIDTLQYKGLVKK 175

Query: 182 IPSSLKDVPYPVIMQPNLVVEF 203
           I          + +   LVVE+
Sbjct: 176 ILDRK---WVGLKINELLVVEY 194


>gi|37960581|gb|AAP70660.1| small ribosomal protein 4 [Flatbergium sericeum]
          Length = 195

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P +   Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRILRRLGVLPGLTNKTPQSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V
Sbjct: 58  QLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  + +  +   ++    P +++++         +I     
Sbjct: 118 NIPSYRCKPRDFITIKDRQKSRSIITRSLDYSQSYKTPNHLTLDSLQKKGLVNQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|7576765|gb|AAF63979.1| small ribosomal protein 4 [Meiotrichum lyallii]
          Length = 191

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI 
Sbjct: 57  NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|49182698|gb|AAT57811.1| small ribosomal protein [Dendrohypopterygium arbuscula]
          Length = 195

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYV 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67036102|gb|AAY62977.1| small ribosomal protein subunit 4 [Thuidiopsis furfurosa]
          Length = 194

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTTKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|210611153|ref|ZP_03288767.1| hypothetical protein CLONEX_00957 [Clostridium nexile DSM 1787]
 gi|210152140|gb|EEA83147.1| hypothetical protein CLONEX_00957 [Clostridium nexile DSM 1787]
          Length = 197

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +        ++ +S        R+ S+   +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGMDPIYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ F +A +  G T  NL+  LESRLD +V+R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYFAKASKMNGMTGENLMILLESRLDNVVFRMGFARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+K+K K      +  +    R VPE++ VN + +  T 
Sbjct: 114 VLVNGKQVNIPSYLVKAGDVIEIKEKHKGSQRYKDILEVTGGRLVPEWLDVNAEGLQGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPTR---EVIDVPVDEMLIVELYSK 197


>gi|154483162|ref|ZP_02025610.1| hypothetical protein EUBVEN_00863 [Eubacterium ventriosum ATCC
           27560]
 gi|149735970|gb|EDM51856.1| hypothetical protein EUBVEN_00863 [Eubacterium ventriosum ATCC
           27560]
          Length = 197

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R+        R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGLDPIYLGIDKKSNRNL------NRSSRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +++A +  G T  NL+  LE+RLD +++R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYQKAQKKPGMTGENLMIILETRLDNVIFRMGFARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+K+K K      +  +    R VP ++ V+ +N+    
Sbjct: 114 VLVNGKQVNIPSYLIKVGDVIEIKEKCKGSQRYKDIIEVTGGRTVPAWVEVDQENLKGEI 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P   +     V +   L+VE YS+
Sbjct: 174 KELPKRDE---IDVPVDEMLIVELYSK 197


>gi|42556398|gb|AAS19794.1| small ribosomal protein 4 [Blasia pusilla]
          Length = 191

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K   +   Y   L+      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKILKSKSGY---LNPSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNINVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK  D+I +K + K  + + +     ++  +P +++ +         +I        
Sbjct: 117 SYNCKPKDIITIKNRQKSQSIITKNLNSFQKSKIPNHLTFDLIQFKGLVNQIIDR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|29027168|gb|AAN47146.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027170|gb|AAN47147.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027172|gb|AAN47148.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027176|gb|AAN47150.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027178|gb|AAN47151.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027180|gb|AAN47152.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027182|gb|AAN47153.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027184|gb|AAN47154.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027186|gb|AAN47155.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027188|gb|AAN47156.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027196|gb|AAN47160.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027198|gb|AAN47161.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027200|gb|AAN47162.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027202|gb|AAN47163.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
          Length = 194

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIGKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|300088170|ref|YP_003758692.1| 30S ribosomal protein S4 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527903|gb|ADJ26371.1| ribosomal protein S4 [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 207

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGR-----PKSPVNTRSYGPG-LHGQRRKSKPSYFGLQLRA 54
           M++   +  +  RR GE L  +      K   + R   PG   G+ R+   S  G QLR 
Sbjct: 1   MARYYLAVCRQCRRSGEKLMLKGNKCLSKCTFDKRPKPPGPQLGRPRR--LSDRGTQLRE 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++  YG + E++FR +F +A+R  G T  N I  LE RLD +VYR     +   ARQ
Sbjct: 59  KQKIRYTYGVL-ERQFRRVFADAERLAGVTGDNFIVLLERRLDNVVYRLGLADSRAQARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            V H H+ VNGR ++I SY  KE D I  +++S++        ++ E + VP+++SV+  
Sbjct: 118 LVRHGHITVNGRKLDIPSYLVKESDEITFREQSRKTGYYKRVVEVIETKVVPDWLSVDRK 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +V     +P+          +     VE+YSR
Sbjct: 178 TLVCKVSSLPTPGD---LEQKLDAQAAVEYYSR 207


>gi|225574732|ref|ZP_03783342.1| hypothetical protein RUMHYD_02809 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038061|gb|EEG48307.1| hypothetical protein RUMHYD_02809 [Blautia hydrogenotrophica DSM
           10507]
          Length = 197

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +  +         +TR        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLDLDPIYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +K+AD+ +G T  NL+  LESRLD IV+R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYKKADKMQGQTGENLMVMLESRLDNIVFRMGFARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           + VNG+ VNI SY  K GDVIE+K+K K         +    R VPE++ V+ + +  T 
Sbjct: 114 ITVNGKVVNIPSYLVKAGDVIEIKEKCKGSERYKGILEVTGGRLVPEWLDVDQEALRGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPTRDI---IDVPVNEMLIVELYSK 197


>gi|121761839|gb|ABM65005.1| ribosomal protein S4 [Plagiomnium vesicatum]
          Length = 195

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMASTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|157689418|gb|ABV65265.1| ribosomal protein S4 [Batis maritima]
          Length = 193

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 9/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RTVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSLTIPQARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I VK + K  A V       A  ++P+++++          +I     
Sbjct: 116 DIPSYRCKPRDIITVKDEQKSRALVHTFLDSSAHEELPKHLTLQTFQYEGFVNQIIDRK- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 --SVSLKINELLVVEYYSR 191


>gi|32401802|gb|AAP80889.1| small ribosomal protein 4 [Nandina domestica]
          Length = 191

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P    + G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 6   GALPGLTSKRP----TPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 60

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 61  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 120

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  + + K  A +      +   ++P++++++         +I  S       + 
Sbjct: 121 KPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGLVNQIIDSK---WVGLK 177

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 178 INELLVVEYYSR 189


>gi|63101043|gb|AAY33146.1| small ribosomal protein 4 [Sphaerotheciella sphaerocarpa]
          Length = 194

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|28194747|gb|AAO33635.1|AF480990_1 ribosomal protein S4 [Tortula atrovirens]
 gi|28194777|gb|AAO33650.1|AF481005_1 ribosomal protein S4 [Crossidium davidai]
          Length = 196

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLNINELLVVEYYSR 194


>gi|28194727|gb|AAO33625.1|AF480980_1 ribosomal protein S4 [Tetrapterum tetragonum]
 gi|157887722|emb|CAM33383.1| ribosomal protein s4 [Tetrapterum tetragonum]
          Length = 196

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SY CK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYCCKPQDFITINDRKKSQVIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQDSIGLKINELLVVEYYSR 194


>gi|6002041|emb|CAA58929.1| ribosomal protein S4 [Cyperus vegetus]
          Length = 199

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 6/204 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+        +       + P       + K   + ++L  KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLRALPGLVQRKKYRKLKFRPVDAKIPFRKKKKPYRIRLEEKQKIRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A +S+G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 61  HYG-LTERQLVRYIHIAGKSKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATF 179
           +LVNG  V+I SYRCK  D+I +K   +    V ++    A+  +P+++++   N     
Sbjct: 120 ILVNGHIVDIPSYRCKPRDIITIKDNERSFDLVKKSIASSAQNKLPKHLTI-SKNYTGRV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEF 203
            +I    +     + +   LVVE+
Sbjct: 179 KKIIDRPE---VGLQIDELLVVEY 199


>gi|28194745|gb|AAO33634.1|AF480989_1 ribosomal protein S4 [Tortula bolanderi]
 gi|28194773|gb|AAO33648.1|AF481003_1 ribosomal protein S4 [Tortula bolanderi]
 gi|85001763|gb|ABC68419.1| small ribosomal protein 4 [Tortula bolanderi]
          Length = 196

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKTPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I + ++ K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|170516219|gb|ACB15111.1| small ribosomal protein 4 [Lepidozamia peroffskyana]
          Length = 194

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K P  +R+        RR    S + ++L  KQK++ +YG ++E
Sbjct: 1   RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRR---ISQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 56  RQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRV 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  DVI V+ + K  A + +   L+++D +P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDVITVRDQQKLRAMIEKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WIGLKINELLVVEYYSR 192


>gi|157689498|gb|ABV65305.1| ribosomal protein S4 [Hypseocharis bilobata]
          Length = 197

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 11/204 (5%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVN-TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
              + K   R+G       KSP + ++   P      R  K S + ++L  KQK++ +YG
Sbjct: 1   RGPRFKKICRLGALPGLTSKSPRDVSKKKTP-----SRARKKSQYRIRLEEKQKLRFHYG 55

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LV
Sbjct: 56  -LTERQLLKYVRIARKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPRARQLVNHRHILV 114

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D+I  ++K K  A +  +   +  + +P ++++N         +I
Sbjct: 115 NDHIVDIPSYRCKPRDIITAREKPKSRALIQNSLDSSPPKKLPNHLTLNPLQYKGLVNKI 174

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             S +     + ++  LVVE+YSR
Sbjct: 175 IDSKR---AGLKIKELLVVEYYSR 195


>gi|20531081|gb|AAM27362.1| ribosomal protein 4 [Diphyscium fulvifolium]
          Length = 192

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    +++    +++   P ++ ++         +I       
Sbjct: 117 PSYRCKPQDFITIKDRQKSQNIIVKNMDFSQKYKTPNHLXLDSLXKKGLVNQILDRG--- 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|153854997|ref|ZP_01996210.1| hypothetical protein DORLON_02216 [Dorea longicatena DSM 13814]
 gi|149752494|gb|EDM62425.1| hypothetical protein DORLON_02216 [Dorea longicatena DSM 13814]
          Length = 197

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +        ++ +S        R+ S+   +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGMDPVYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK F + FK+A +  G T  NL+  LESRLD +V+R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFLNYFKKASKMNGMTGENLMVLLESRLDNVVFRLGLARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ +NI SY  K GDV+E+K+  K      E  +    R VPE++  + +N+  T 
Sbjct: 114 VLVNGKQINIPSYLVKAGDVVEIKEAKKSSPRYKEIVEVTGGRLVPEWLEADLENLKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P         V +   L+VE YS+
Sbjct: 174 KELPKR---EAIDVPVDEMLIVELYSK 197


>gi|67036070|gb|AAY62961.1| small ribosomal protein subunit 4 [Leskeella nervosa]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|63191869|gb|AAY34894.1| small ribosomal protein subunit 4 [Ephemerum serratum]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKTPHVKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDCITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|49182791|gb|AAT57857.1| small ribosomal protein [Riccardia sp. Davis 151]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       + P +  SY   +       K S + L+L  KQK++ ++G ++E
Sbjct: 1   RTKIIRRLGALPGLTSRIPKSRSSY---IDRSASSKKISQYRLRLEEKQKLRFHHG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD  ++R   VPTI AARQ VNHRH+L+N   
Sbjct: 57  RQLLKYVCIAKKAKGSTGQFLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHILINASM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I +K + +   S+L A+   ++  +P +++ +  +   +  R     
Sbjct: 117 VDIPSYNCKIGDIITIKNRGRNQLSLLTATSSTQKPGIPNHLTFDSVDFRGSVNRTIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EGIDLKINELLVVEYYSR 193


>gi|17025860|gb|AAL32095.1| ribosomal protein 4 [Mitthyridium sp. Wall 3830]
          Length = 199

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 5   RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 60

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 61  RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 120

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L
Sbjct: 121 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI---L 177

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 178 DHESIGLKINELLVVEYYSR 197


>gi|170516225|gb|ACB15114.1| small ribosomal protein 4 [Ceratozamia miqueliana]
          Length = 194

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K P  +R+        R+    S + ++L  KQK++ +YG ++E
Sbjct: 1   RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 56  RQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRV 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRC   DVI V+ + +  A + +   L+++D +P +++++         +I  S 
Sbjct: 116 VDIPSYRCNPRDVITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVHQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WISLKINELLVVEYYSR 192


>gi|293634127|gb|ADE60443.1| ribosomal protein subunit 4 [Polytrichum strictum]
          Length = 191

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI 
Sbjct: 57  NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|37548877|gb|AAO32707.1| ribosomal protein 4 [Polytrichastrum formosum]
          Length = 192

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 2   IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI 
Sbjct: 58  NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L    
Sbjct: 118 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 174

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 175 IGLKINELLVVEYYSR 190


>gi|28194683|gb|AAO33603.1|AF480958_1 ribosomal protein S4 [Syntrichia caninervis]
          Length = 196

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGILPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|67035624|gb|AAY62743.1| small ribosomal protein subunit 4 [Mesotus celatus]
          Length = 194

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSGS---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A  ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  VP +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|32401804|gb|AAP80890.1| small ribosomal protein 4 [Magnolia stellata]
          Length = 189

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGALPGLTSKRP----RPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLR 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I S
Sbjct: 56  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I  + + +  A +      +   ++ ++++ +         +I  S      
Sbjct: 116 YRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLVNQIIDSK---WI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|67036008|gb|AAY62930.1| small ribosomal protein subunit 4 [Claopodium whippleanum]
          Length = 194

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE+RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLETRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63101009|gb|AAY33129.1| small ribosomal protein 4 [Limbella tricostata]
          Length = 194

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI AARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPAARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|294628350|ref|ZP_06706910.1| 30S ribosomal protein S4 [Streptomyces sp. e14]
 gi|292831683|gb|EFF90032.1| 30S ribosomal protein S4 [Streptomyces sp. e14]
          Length = 204

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A + +G T   LI  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-VSERQLVRAYERASKVQGKTGEALIVELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG+ V+  S+R +  DV++V+ +SK+      A +     E + P Y+ VN   +  
Sbjct: 119 IQVNGQKVDKPSFRVRPDDVVQVRDRSKEKTLFTIAREGGFAPEGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204


>gi|92417455|gb|ABE76823.1| ribosomal protein subunit 4 [Fissidens taxifolius]
          Length = 196

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGILQGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMTPTIPGARQLVNHRHILVNDH 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    +++    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDQQKYQVMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQIIDQ 176

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 177 ---ESIGLKINELLVVEYYSR 194


>gi|293634097|gb|ADE60428.1| ribosomal protein subunit 4 [Polytrichastrum pallidisetum]
          Length = 191

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T   L+  LE RLD I++R     TI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|37992641|gb|AAR06499.1| small ribosomal protein 4 [Penzigiella cordata]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQLTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|121761841|gb|ABM65006.1| ribosomal protein S4 [Plagiomnium integrum]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIXLKINELLVVEYYSR 193


>gi|63078605|gb|AAY29389.1| ribosomal protein S4 [Pleurochaete squarrosa]
          Length = 196

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 2   RVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 58  RQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L
Sbjct: 118 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 175 DQESIGLKINELLVVEYYSR 194


>gi|63078591|gb|AAY29382.1| ribosomal protein S4 [Pleurochaete squarrosa]
 gi|63078601|gb|AAY29387.1| ribosomal protein S4 [Pleurochaete squarrosa]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|42556424|gb|AAS19807.1| small ribosomal protein 4 [Heteroscyphus argutus]
          Length = 191

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHILINDDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIIAIKNKQKSQSVITKNLNLFQKLKIPSHLTFDSMKLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|50235354|gb|AAT70710.1| Rps4 [Brachythecium bellicum]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42556426|gb|AAS19808.1| small ribosomal protein 4 [Hygrolembidium acrocladum]
          Length = 191

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+      Y           K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKPKSGY---NDRSTPNKKVSQYRVRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYVRIARRAKGSTGQVLLQLLEMRLDNTILRFGMASTIPGARQLVNHRHIPINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K K K  + + +   L +   +P +++ +   +  +  +  +      
Sbjct: 117 SYNCKPGDIITIKNKQKSQSVITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNIKINELLVVEYYSR 189


>gi|290961835|ref|YP_003493017.1| 30S ribosomal protein S4 [Streptomyces scabiei 87.22]
 gi|260651361|emb|CBG74483.1| 30S ribosomal protein S4 [Streptomyces scabiei 87.22]
          Length = 204

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A + +G T   LI  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-VSERQLVRAYERASKVQGKTGEALIIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R K  DV+ V+++S+Q      A +    A+ + P Y+ VN   +  
Sbjct: 119 IEVNGHKVDKPSFRVKPDDVVMVRERSRQKPLFEVAREGGFAADGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---VPVICDEQLVVEYYAR 204


>gi|209969161|emb|CAR92828.1| ribosomal protein S4 [Iris humilis]
 gi|209969163|emb|CAR92829.1| ribosomal protein S4 [Iris humilis]
 gi|209969165|emb|CAR92830.1| ribosomal protein S4 [Iris humilis]
 gi|209969167|emb|CAR92831.1| ribosomal protein S4 [Iris humilis]
 gi|209969169|emb|CAR92832.1| ribosomal protein S4 [Iris humilis]
 gi|209969171|emb|CAR92833.1| ribosomal protein S4 [Iris humilis]
 gi|209969173|emb|CAR92834.1| ribosomal protein S4 [Iris humilis]
 gi|209969175|emb|CAR92835.1| ribosomal protein S4 [Iris humilis]
 gi|209969177|emb|CAR92836.1| ribosomal protein S4 [Iris humilis]
 gi|209969179|emb|CAR92837.1| ribosomal protein S4 [Iris humilis]
 gi|209969181|emb|CAR92838.1| ribosomal protein S4 [Iris humilis]
 gi|209969183|emb|CAR92839.1| ribosomal protein S4 [Iris humilis]
 gi|209969185|emb|CAR92840.1| ribosomal protein S4 [Iris humilis]
          Length = 187

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  K K +  A +          ++P +++++         +I  S       +
Sbjct: 116 CKPRDIITTKDKQRSKALIQNFIASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|22854723|gb|AAN09781.1| small ribosomal protein 4 [Leucoloma zeyheri]
          Length = 191

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIASTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K        +++ +  +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|28194827|gb|AAO33675.1|AF481030_1 ribosomal protein S4 [Tortula revolvens]
          Length = 196

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPSHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|121761833|gb|ABM65002.1| ribosomal protein S4 [Plagiomnium cordatum]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 IDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---FIDLKINELLVVEYYSR 193


>gi|121761845|gb|ABM65008.1| ribosomal protein S4 [Plagiomnium vesicatum]
          Length = 195

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMASTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|33413219|emb|CAD86745.1| ribosomal protein small subunit 4 [Dichodontium pellucidum]
          Length = 187

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTSKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A +++    +++  VP++++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNQQKSQAMIMKNLDFSQKYKVPDHLTFNSLEKKGLVNQI---LDQESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|42794699|gb|AAS45745.1| Rps4 [Sphyrospermum buxifolium]
          Length = 211

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|67035734|gb|AAY62798.1| small ribosomal protein subunit 4 [Bryobartramia novae-valesiae]
          Length = 188

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +V+R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVVFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  VP ++S +         +I   L      +
Sbjct: 117 CKPQDFISIKNRQKSQAIIIKNIDFSQKYKVPNHLSFDSLQKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|169142796|ref|YP_001687221.1| ribosomal protein S4 [Aneura mirabilis]
 gi|187608859|sp|A2T833|RR4_ANEMR RecName: Full=Plastid 30S ribosomal protein S4
 gi|153973822|gb|ABS54482.1| ribosomal protein S4 [Aneura mirabilis]
          Length = 202

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR G       K+P                 K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRMKMIRRPGTLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRL 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++       A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           V +N   ++I SY CK GDVI +  + K            ++ ++P +++ +    + + 
Sbjct: 117 VSINEHIIDIPSYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I          + +   LVVE+YSR
Sbjct: 177 QQIIDRD---WIDLKINELLVVEYYSR 200


>gi|42794654|gb|AAS45724.1| Rps4 [Disterigma rimbachii]
          Length = 211

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQXKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAERD-----VPEYISVN 171
           RHVLVNG  ++I SYRCK  D+I  ++KS+ L   S      L  R      VP ++++N
Sbjct: 116 RHVLVNGHIIDIPSYRCKPRDIITAREKSRALIHNSFQNLFDLPSRKQKRKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|302388060|ref|YP_003823882.1| ribosomal protein S4 [Clostridium saccharolyticum WM1]
 gi|302198688|gb|ADL06259.1| ribosomal protein S4 [Clostridium saccharolyticum WM1]
          Length = 197

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 106/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R        +R   K S +G+QLR KQK K 
Sbjct: 1   MAVDRVPVLKRCRSLGLDPIYLGIDKKSNREL------KRANRKMSEYGIQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A R  G    NL+  LE RLD +V+R  F  T    RQ V+H+ 
Sbjct: 55  IYGVL-EKPFRNYYAKASRMNGLVGENLMILLERRLDNVVFRMGFGRTRRETRQMVDHKS 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI SY  K GDVIEVK+KSK  A      +  A R VP ++ V+H+N+  T 
Sbjct: 114 ILVNGKCVNIPSYLIKAGDVIEVKEKSKANARFKSVQEATAGRMVPAWLDVDHENLRGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              P+  +     V +   L+VE YS+
Sbjct: 174 KEFPTRDE---IDVPVNEMLIVELYSK 197


>gi|121761879|gb|ABM65025.1| ribosomal protein S4 [Plagiomnium vesicatum]
          Length = 195

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE+R D I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYIRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPAARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNFLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|67036064|gb|AAY62958.1| small ribosomal protein subunit 4 [Isopterygiopsis muelleriana]
          Length = 195

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVSLQSPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|284049231|ref|YP_003399570.1| ribosomal protein S4 [Acidaminococcus fermentans DSM 20731]
 gi|283953452|gb|ADB48255.1| ribosomal protein S4 [Acidaminococcus fermentans DSM 20731]
          Length = 197

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  ++   K  R +G +         + R        +R+  K S +G+QL  KQK K 
Sbjct: 1   MAIDKTPVLKRCRSLGMSPAFVGVMKESNRQP------KRQFKKKSEYGMQLAEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +++A +  G    NL+  LE RLD +VYR     T   ARQ V H H
Sbjct: 55  IYGVL-EKQFRGYYEKAKKMEGIAGANLLILLERRLDNVVYRMGLAHTRRQARQLVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           + VNG+ ++I S   K GDV+ V + S+  A     ++ L +  VP +ISV+  N+    
Sbjct: 114 IAVNGKRLDIPSALVKAGDVVSVMENSRSSAYFKGMAEVLGKTSVPAWISVDAQNLCGKV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P   +D+  PV  +  ++VE YS+
Sbjct: 174 DRLPVR-EDIDVPV--EEQMIVELYSK 197


>gi|209969129|emb|CAR92812.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969131|emb|CAR92813.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969133|emb|CAR92814.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969135|emb|CAR92815.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969137|emb|CAR92816.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969139|emb|CAR92817.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969141|emb|CAR92818.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969143|emb|CAR92819.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969145|emb|CAR92820.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969147|emb|CAR92821.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969149|emb|CAR92822.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969151|emb|CAR92823.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969153|emb|CAR92824.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969155|emb|CAR92825.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969157|emb|CAR92826.1| ribosomal protein S4 [Iris mandshurica]
 gi|209969159|emb|CAR92827.1| ribosomal protein S4 [Iris mandshurica]
          Length = 187

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRP----RSGSDLENQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  K K +  A +          ++P +++++         +I  S       +
Sbjct: 116 CKPRDIITTKDKQRSKALIQNFIASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|209969113|emb|CAR92804.1| ribosomal protein S4 [Iris vorobievii]
          Length = 187

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKGP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  K K +  A +          ++P +++++         +I  S       +
Sbjct: 116 CKPRDIITTKDKQRSKALIQNFMASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|163816004|ref|ZP_02207374.1| hypothetical protein COPEUT_02184 [Coprococcus eutactus ATCC 27759]
 gi|158448814|gb|EDP25809.1| hypothetical protein COPEUT_02184 [Coprococcus eutactus ATCC 27759]
          Length = 214

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 77/208 (37%), Positives = 112/208 (53%), Gaps = 13/208 (6%)

Query: 1   MSKRESSKHKIDRRIG-ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M+   +   K  R +G E ++       N +         R   K S +GLQLR KQK K
Sbjct: 18  MAVDRTPVLKRCRSLGMEPMYLGIDKKSNRKP-------NRSNRKQSEYGLQLREKQKAK 70

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK FR+++ +A++ +G T  NL++ LE RLD I++R  F  T   ARQ V+H+
Sbjct: 71  FIYGVL-EKPFRNLYAKAEQQKGLTGPNLMTLLELRLDNIIFRLGFARTRREARQIVDHK 129

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVAT 178
           HVLVNG+ VNI SY  K GD IE+++KSK L    +     E   VP +++ + DN+   
Sbjct: 130 HVLVNGKCVNIPSYSVKPGDKIEIREKSKSLQRYKDIMAATEGVLVPGWLTADRDNLTGE 189

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V  PS  +     V +   L+VE YS+
Sbjct: 190 VVEKPSREQ---IDVPVNETLIVELYSK 214


>gi|42794630|gb|AAS45714.1| Rps4 [Cavendishia bracteata]
          Length = 211

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+ L          L + +   + VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKKVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|209969095|emb|CAR92795.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969097|emb|CAR92796.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969099|emb|CAR92797.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969101|emb|CAR92798.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969103|emb|CAR92799.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969105|emb|CAR92800.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969107|emb|CAR92801.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969109|emb|CAR92802.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969111|emb|CAR92803.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969117|emb|CAR92806.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969119|emb|CAR92807.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969121|emb|CAR92808.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969123|emb|CAR92809.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969125|emb|CAR92810.1| ribosomal protein S4 [Iris vorobievii]
 gi|209969127|emb|CAR92811.1| ribosomal protein S4 [Iris vorobievii]
          Length = 187

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  K K +  A +          ++P +++++         +I  S       +
Sbjct: 116 CKPRDIITTKDKQRSKALIQNFMASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|78102665|gb|ABB21546.1| small ribosomal protein 4 [Plagiochila gigantea]
          Length = 189

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|28194841|gb|AAO33682.1|AF481037_1 ribosomal protein S4 [Syntrichia rigescens]
          Length = 196

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGILPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNC 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|67036000|gb|AAY62926.1| small ribosomal protein subunit 4 [Trachypus bicolor]
          Length = 195

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLK---PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++           +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYGSLEKKGLVTQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESVGLKINELLVVEYYSR 193


>gi|67036076|gb|AAY62964.1| small ribosomal protein subunit 4 [Bestia vancouveriensis]
          Length = 194

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|78369621|gb|ABB43040.1| ribosomal protein 4 [Calymperes tenerum]
          Length = 198

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S+   ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALSGLTNKIPQLKSSF---VNQSISSKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D I +K + K    +++ +  + +  +P ++  N         +I 
Sbjct: 117 KRIVNIPSYQCKLQDAITIKDQQKYHTMIVKNTNFSPKYKIPSHLMFNSVEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|67035859|gb|AAY62856.1| small ribosomal protein subunit 4 [Warburgiella leucocytus]
          Length = 194

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  + +++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFSQKSKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|24473842|gb|AAL82765.1| small ribosomal subunit protein 4 [Plagiobryum demissum]
          Length = 195

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A + +   L  E   P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQEYKTPNHLTYNFLKKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|20531124|gb|AAM27382.1| ribosomal protein 4 [Hedwigia ciliata]
          Length = 194

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 3   IIRRLGTLPGLTNKTPQLKSSS---INQSTPNKKISQYRIRLEEKQKLRFHYG-ITERQL 58

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I
Sbjct: 59  LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNDRIVDI 118

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L   
Sbjct: 119 PSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLQKKGLVNQI---LDRE 175

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 176 LIGLKINELLVVEYYSR 192


>gi|63191755|gb|AAY34837.1| small ribosomal protein subunit 4 [Macrocoma tenuis]
          Length = 196

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNQR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +     ++  +P ++  N         +I   
Sbjct: 117 IVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLVYNSLEKKGLVNQIVDR 176

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 177 ---ELIGLKINELLVVEYYSR 194


>gi|63101007|gb|AAY33128.1| small ribosomal protein 4 [Pleuroziopsis ruthenica]
          Length = 194

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|293634045|gb|ADE60402.1| ribosomal protein subunit 4 [Pogonatum neesii]
          Length = 191

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPHLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A + +     ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQESQAIITKNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|78102693|gb|ABB21560.1| small ribosomal protein 4 [Plagiochila minutula]
          Length = 189

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+ FLE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|28194703|gb|AAO33613.1|AF480968_1 ribosomal protein S4 [Gymnostomum viridulum]
          Length = 196

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGNLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITIKDRQKSEIMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|328488190|gb|AEB19908.1| small ribosomal protein 4 [Schistochila glaucescens]
          Length = 191

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  V+R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTVFRMGIATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K + K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNEQKSQSIITRNLNLLQKVKIPNHLTFDPTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|153812444|ref|ZP_01965112.1| hypothetical protein RUMOBE_02843 [Ruminococcus obeum ATCC 29174]
 gi|149831369|gb|EDM86457.1| hypothetical protein RUMOBE_02843 [Ruminococcus obeum ATCC 29174]
          Length = 197

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         +TR        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKVSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK F + + +ADR  G T  NL+  LESRLD +V+R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFHNYYNKADRMPGQTGENLMVLLESRLDNVVFRMGLARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GD IE+K+K K         +    R VPE++ VN + +  T 
Sbjct: 114 VLVNGKCVNIPSYLVKAGDTIEIKEKCKGSERYKGILEVTGGRLVPEWLDVNQEALSGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P         V +   L+VE YS+
Sbjct: 174 KELPRR---EAIDVPVNEMLIVELYSK 197


>gi|28194739|gb|AAO33631.1|AF480986_1 ribosomal protein S4 [Pottia bryoides]
          Length = 196

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I + ++ K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFCQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|78102681|gb|ABB21554.1| small ribosomal protein 4 [Plagiochilion oppositum]
          Length = 189

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + +++     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIIIKNINSFQKLKIPSHLTFDPTQLQGSVNQVINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|42556480|gb|AAS19835.1| small ribosomal protein 4 [Pellia sp. Koponen et al. 47823]
 gi|311223012|gb|ADP76588.1| small ribosomal protein 4 [Pellia endiviifolia]
          Length = 191

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   ++      K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKLESSY---INQSTPNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+++N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHGHIVINDYTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+  DVI +K ++K  + + +      +  +P +++ +      +  +         
Sbjct: 117 SYNCEPRDVITIKNRNKSQSLITKNIDSFRKPKIPNHLTFDFTKFRGSVNQTIDR---EC 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|118577589|gb|ABL07160.1| small ribosomal protein 4 [Piper khasianum]
          Length = 187

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYR
Sbjct: 56  RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  + + +    V  +   A R ++P++++++         +I  S       +
Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|303233180|ref|ZP_07319853.1| ribosomal protein S4 [Atopobium vaginae PB189-T1-4]
 gi|302480765|gb|EFL43852.1| ribosomal protein S4 [Atopobium vaginae PB189-T1-4]
          Length = 176

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 66/162 (40%), Positives = 97/162 (59%), Gaps = 5/162 (3%)

Query: 46  SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105
           S +G QLR KQK K  YG I EK+FR  + +A ++ G T  NL+S LE+RLD +V+R  F
Sbjct: 19  SEYGTQLREKQKAKFIYG-ILEKQFRGYYNKALKNEGITGDNLMSLLETRLDNVVFRLGF 77

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164
             T   ARQ V H H+ VNG+ V+I SY+ K  DVI V  K+K L  + E+  ++ER  V
Sbjct: 78  ARTRKEARQTVRHGHITVNGKRVDIPSYQVKAQDVIAVNPKAKDLLPIKESLIVSERMAV 137

Query: 165 PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           P ++ V+ + +  T ++IP   +     + +   L+VE YS+
Sbjct: 138 PAWLEVDIEKLQGTVLQIPVRDQ---IDLDIDAQLIVELYSK 176


>gi|157785997|gb|ABV74171.1| small ribosomal protein 4 [Lopidium concinnum]
 gi|157786000|gb|ABV74172.1| small ribosomal protein 4 [Lopidium concinnum]
          Length = 198

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 7/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       KS    +     ++      K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 58

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG 
Sbjct: 59  ERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGY 118

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K K K  + + +  +  ++  +  +++ +         +I   
Sbjct: 119 IVDIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI--- 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 176 LDRESIGLKINELLVVEYYSR 196


>gi|66866239|gb|AAY57788.1| small ribosomal protein 4 [Leucolepis acanthoneura]
          Length = 204

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 13/206 (6%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 4   PRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 59

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 60  ERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 119

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFV 180
            V+I SYRCK  D I +K + K    +         D      +P +++ N  N      
Sbjct: 120 LVDIPSYRCKPQDFITIKDRQKSQTMIXXXXXXKNIDFYQKYKIPNHLTYNSLNKKGLVN 179

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I   L      + +   LVVE+YSR
Sbjct: 180 QI---LDRESIDLKINELLVVEYYSR 202


>gi|37992723|gb|AAR06540.1| small ribosomal protein 4 [Weymouthia mollis]
          Length = 192

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ N         +   +L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQ---TLDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|21914148|gb|AAM81296.1| ribosomal protein subunit 4 [Brachymenium capitulatum]
          Length = 195

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|269101005|ref|YP_003289153.1| 30S ribosomal protein S4 [Ectocarpus siliculosus]
 gi|266631513|emb|CAV31184.1| Chloroplast 30S ribosomal protein S4 [Ectocarpus siliculosus]
 gi|270118643|emb|CAT18689.1| Chloroplast 30S ribosomal protein S4 [Ectocarpus siliculosus]
          Length = 204

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 16/212 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +    + KI  R+G +L G  +  V  +        +++KSK S + ++L  KQK++ 
Sbjct: 1   MVRYRGPRLKIINRLG-DLPGLTRKVVIKQETP-----EQKKSKASPYKIRLNEKQKLRY 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E +     KEA R +G T   L+  LE RLD I++R    PTI AARQFV+H H
Sbjct: 55  NYG-ITESQLLRYVKEARRRKGLTGFLLMQLLEMRLDNIIFRLGLAPTIPAARQFVSHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP------EYISVNHDN 174
           V++N + VNI S++C+  D+I   +  K +  +       E   P       ++  +   
Sbjct: 114 VMINKKRVNIPSFQCQPNDIISFSKNPKTVTLIKANLNQKENSNPNDNVSNSHLEFDSQL 173

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V +            +   LV+E+YSR
Sbjct: 174 LTGKIVNLIQRKD---LRFKINDMLVIEYYSR 202


>gi|17025866|gb|AAL32098.1| ribosomal protein 4 [Mitthyridium sp. Wall 2546]
          Length = 200

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 6   RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 61

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 62  RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 121

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L
Sbjct: 122 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---L 178

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 179 DQESIGLKINELLVVEYYSR 198


>gi|7576761|gb|AAF63977.1| small ribosomal protein 4 [Itatiella ulei]
          Length = 193

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 2   IIRRLGALPGLTNKTLQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI
Sbjct: 58  LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L   
Sbjct: 118 PSYRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 174

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 175 SIGLKINELLVVEYYSR 191


>gi|42794662|gb|AAS45728.1| Rps4 [Macleania cordifolia]
          Length = 211

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQXKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|28194775|gb|AAO33649.1|AF481004_1 ribosomal protein S4 [Crossidium squamiferum]
          Length = 196

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVIITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|28194743|gb|AAO33633.1|AF480988_1 ribosomal protein S4 [Pottia lanceolata]
          Length = 194

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       + P          +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNEIPHLR---PSSXNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G +   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSSGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I + ++ K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|46486540|gb|AAS98706.1| ribosomal protein subunit 4 [Hampeella alaris]
          Length = 198

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I VK        + +    +++  +P ++  +         +I 
Sbjct: 117 DCIVNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|289599856|gb|ADD12879.1| ribosomal protein S4 [Curatella americana]
          Length = 189

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I S
Sbjct: 56  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I VK + K  A +          ++P++++++         +I  S      
Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WV 172

Query: 192 PVIMQPNLVVEFYSR 206
            V +   LVVE+YSR
Sbjct: 173 GVKINELLVVEYYSR 187


>gi|11228658|gb|AAG33114.1| small ribosomal protein 4 [Oncophorus wahlenbergii]
          Length = 191

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQAMIIKNVDFSQKAKIPNHLTFNSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67036072|gb|AAY62962.1| small ribosomal protein subunit 4 [Lescuraea radicosa]
          Length = 195

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|260589250|ref|ZP_05855163.1| ribosomal protein S4 [Blautia hansenii DSM 20583]
 gi|331082658|ref|ZP_08331781.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540331|gb|EEX20900.1| ribosomal protein S4 [Blautia hansenii DSM 20583]
 gi|330400277|gb|EGG79919.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 197

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         +TR        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGLDPVYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +K+AD+  G T  NL+  LE+RLD +++R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYKKADQKPGQTGENLMIMLETRLDNVIFRMGLARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           V+VNG+ VNI SY  K GDVIE+K+K K      +  +    R VP ++ ++ + +    
Sbjct: 114 VMVNGKQVNIPSYLVKAGDVIEIKEKCKGSQRYKDILEVTGGRLVPAWLDIDQEALKGEV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KALPTREE---IDVPVDEMLIVELYSK 197


>gi|74273099|gb|ABA01249.1| ribosomal protein S4 [Passiflora arborea]
          Length = 186

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K + K    +  +  L+   ++P +++++         +I  S       + 
Sbjct: 116 KPRDIIMTKDEQKSRTLIQNSLDLSPHEELPNHLTLHPFQYKGLVNQIIDSK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|157689458|gb|ABV65285.1| ribosomal protein S4 [Crypteronia paniculata]
          Length = 191

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   KIRRLGALPGLTSKRP----RTGSDFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I
Sbjct: 56  LKCVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D+I  K + K  A +       A  ++ ++++++         +I  S    
Sbjct: 116 PSYRCKPRDIITAKDEQKSRALIQNYLDSSAHEELSKHLTLHPVQYKGLVNQIIDSK--- 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 WVGLKINELLVVEYYSR 189


>gi|28194685|gb|AAO33604.1|AF480959_1 ribosomal protein S4 [Pterygoneurum lamellatum]
 gi|28194763|gb|AAO33643.1|AF480998_1 ribosomal protein S4 [Tortula subulata var. subinermis]
 gi|28194779|gb|AAO33651.1|AF481006_1 ribosomal protein S4 [Crossidium aberrans]
 gi|28194857|gb|AAO33690.1|AF481045_1 ribosomal protein S4 [Bryoerythrophyllum recurvirostrum]
 gi|28194859|gb|AAO33691.1|AF481046_1 ribosomal protein S4 [Crossidium laevipilum]
          Length = 196

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|295109501|emb|CBL23454.1| SSU ribosomal protein S4P [Ruminococcus obeum A2-162]
          Length = 197

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         +TR        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGLDPIYLGIDKKSTRQL------KRANRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK F + + +ADR  G T  NL+  LESRLD +V+R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFHNYYNKADRMPGQTGENLMVLLESRLDNVVFRMGLARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GD IE+K+K K         +    R VPE++ VN + +  T 
Sbjct: 114 VLVNGKCVNIPSYLVKAGDTIEIKEKCKGSERYKGILEVTGGRLVPEWLDVNQEALSGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P         V +   L+VE YS+
Sbjct: 174 KELPRR---EVIDVPVNEMLIVELYSK 197


>gi|63191761|gb|AAY34840.1| small ribosomal protein subunit 4 [Cyrtopus setosus]
          Length = 194

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|121761829|gb|ABM65000.1| ribosomal protein S4 [Plagiomnium maximoviczii]
          Length = 195

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---FIDLKINELLVVEYYSR 193


>gi|42794627|gb|AAS45713.1| Rps4 [Anthopterus revolutus]
          Length = 211

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S         +K       ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRXTQSRFVXKKKXXXX--IRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE  LD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMGLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKGKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|146261569|gb|ABQ15094.1| ribosomal protein S4 [Itea virginica]
          Length = 187

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P+     G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRPI----VGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  + + K  A +      +   ++P++++++         +I  +       +
Sbjct: 116 CKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDTK---WVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|20531094|gb|AAM27368.1| ribosomal protein 4 [Barbula convoluta]
          Length = 193

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KIIRRLGTLPGLTNKIPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VN
Sbjct: 57  LLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNNIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQ 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|49182682|gb|AAT57803.1| small ribosomal protein [Bryopteris filicina]
          Length = 192

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K           +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTGKISKTK------IDRSVLNKKISQYRIRLEEKQKLRFHYG-LTE 53

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++     PTI +ARQ VNHRH+ +N   
Sbjct: 54  RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINDYI 113

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           +NI SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +     
Sbjct: 114 LNIPSYNCKPGDIITIKNKEKSQSIISKNINLSQKLQIPNHLTFDSTQLRGLVNQTIRR- 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 --EWIDLKINELLVVEYYSR 190


>gi|85001765|gb|ABC68420.1| small ribosomal protein 4 [Ephemerum sessile]
          Length = 195

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKTPQVKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|29422397|gb|AAO84594.1| small ribosomal protein 4 [Flowersia sinensis]
          Length = 198

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKPPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I +  + K  A + +     ++  +P +++ N         +I 
Sbjct: 117 DHIVNIPSYRCKPQDFITIXDRQKSQAIISKNIDXYQKYKIPNHLTYNSLENKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   L VE+YSR
Sbjct: 176 --LDRESIGLKINXLLXVEYYSR 196


>gi|18920773|gb|AAL82431.1| ribosomal protein system 4 [Plagiothecium neckeroideum]
          Length = 196

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 3   CEIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 58

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 59  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 118

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 119 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 RESIGLKINELLVVEYYSR 194


>gi|67035755|gb|AAY62808.1| small ribosomal protein subunit 4 [Muelleriella crassifolia]
          Length = 194

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H++VN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P +++ N         +I     
Sbjct: 117 DIPSYRCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --LIGLKINELLVVEYYSR 192


>gi|17025828|gb|AAL32081.1| ribosomal protein 4 [Syrrhopodon muelleri]
          Length = 198

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKILRRLGTLSGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D I +K + K    +++ +    +   P ++  N         +I 
Sbjct: 117 NRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTSFFPKYKTPNHLIFNSVEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|227345135|gb|ACP28120.1| small ribosomal protein 4 [Clasmatocolea humilis]
          Length = 191

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++    
Sbjct: 3   RLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY
Sbjct: 59  MRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            C+ GD+I ++ K K  + + +      E  +P +++ +   +  +  ++ +        
Sbjct: 119 NCEPGDIITIRNKQKSQSIITKNINFFQELKIPSHLTFDSIKLRGSVNQMINR---EWVN 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|17025830|gb|AAL32082.1| ribosomal protein 4 [Mitthyridium sp. Wall 1086]
          Length = 200

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 6   RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 61

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 62  RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 121

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L
Sbjct: 122 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI---L 178

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 179 DQESIGLKINELLVVEYYSR 198


>gi|125662690|gb|ABN50295.1| small ribosomal protein 4 [Cathaya argyrophylla]
          Length = 198

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+        K P   +        +    K S + ++   KQK++ +YG +
Sbjct: 1   GPRLKIIRRLKTLPGLTSKRPQKRKDS----MNRSSSRKISQYRIRSEEKQKLRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A R++G T   L+  LE RLD I+++    PTI  ARQ VNH H+ VN 
Sbjct: 56  TERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNILFQLGMAPTIPGARQLVNHGHIQVND 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDNMVATFVRI 182
             V+I SY CK  DVI ++ + +  A + +   L +R+   +P +++ +         +I
Sbjct: 116 HMVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRNRDKLPNHLTFHSLQCKGFINQI 175

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             S       + +   LVVE+YSR
Sbjct: 176 IDSK---WISLKINELLVVEYYSR 196


>gi|49182690|gb|AAT57807.1| small ribosomal protein [Ceratolejeunea coarina]
          Length = 192

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 11/200 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K           L       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTE 53

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++      TI  ARQ VNHRH+ +N   
Sbjct: 54  RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQIVNHRHIFINDYI 113

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +     
Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNITLSQKLQIPNHLTFDSTQLRGLINQTIRR- 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 --EWIDLKINELLVVEYYSR 190


>gi|67035947|gb|AAY62900.1| small ribosomal protein subunit 4 [Forsstroemia trichomitria]
          Length = 198

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       ++     S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGTLPGLTNRTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNH+HVL+N
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHKHVLIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYR K  D I +K + K    + +  +L ++  +P +++ N         +I 
Sbjct: 117 DSMVDIPSYRRKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYNSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|63191781|gb|AAY34850.1| small ribosomal protein subunit 4 [Notoligotrichum australe]
          Length = 194

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K       Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKILQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R V
Sbjct: 57  QLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + +  A + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|151370784|gb|ABS11010.1| ribosomal protein subunit 4 [Dendro-hypnum milnei]
          Length = 194

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G  L    K+     S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 2   RIIRRLGALLGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+
Sbjct: 58  LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVD 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L  
Sbjct: 118 IPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI---LDR 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 ESIGLKINELLVVEYYSR 192


>gi|37683554|gb|AAQ98828.1| small ribosomal protein 4 [Pogonatum nudiusculum]
          Length = 190

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|37039871|gb|AAQ88209.1| small ribosomal protein 4 [Andreaea rothii]
          Length = 195

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 2   VRIIRRLGALPGLTNKTPQLKSGY---MNPFISNKKMSQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R V
Sbjct: 58  QLLKYVRIARRAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +    +++  +P ++  N         +I     
Sbjct: 118 NIPSYRCKPQDFITIKDRQKSQAIITKNIDCSQKYKIPNHLIFNSLQKKGLINQIIDR-- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 -ESIGLKINELLVVEYYSR 193


>gi|7576763|gb|AAF63978.1| small ribosomal protein 4 [Lyellia aspera]
          Length = 191

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y    +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGYS---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI 
Sbjct: 57  KYVRIARGAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIAKNIDFSQKYKIPNHLTFNSLETKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67036004|gb|AAY62928.1| small ribosomal protein subunit 4 [Cryptopapillaria penicillata]
          Length = 194

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035935|gb|AAY62894.1| small ribosomal protein subunit 4 [Pseudoleskea andina]
          Length = 197

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K P         ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVRIIRRLGTLPGLTNKXPQLKSXS---INQXTSNKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A + +G T   L+  LE R D  ++R     TI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKXKGSTGEVLLQLLEMRXDNXIFRLGMAXTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I  
Sbjct: 117 XIVDIPSYRCKPQDFITIKNQRKSEAIIXKNIEFYQKXKIPNHLTYSSLEKKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|77019193|emb|CAH60202.1| chloroplast 30S ribosomal protein S4 [Grimmia ovalis]
          Length = 191

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|218135254|ref|ZP_03464058.1| hypothetical protein BACPEC_03159 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990639|gb|EEC56650.1| hypothetical protein BACPEC_03159 [Bacteroides pectinophilus ATCC
           43243]
          Length = 197

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 105/209 (50%), Gaps = 15/209 (7%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+       K  R +  +    G  K                   K S +GLQLR KQK 
Sbjct: 1   MAVNRVPVLKRCRSLDLDPIYLGVDKKSKRKAKNA--------GRKISEYGLQLREKQKA 52

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + EK FR+ +K+A++  G +  NL+  LE RLD +++R  F  T   ARQ V+H
Sbjct: 53  KFIYGVL-EKPFRNYYKKAEKMSGQSGENLMILLELRLDNVIFRMGFARTRKEARQIVDH 111

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVA 177
           +HVLVNG+ VNI SY  K GDVIE+++KSK      +     + R VPE++  + + +  
Sbjct: 112 KHVLVNGKRVNIPSYLVKAGDVIEIREKSKGSERYKQILDATSGRVVPEWLEADAEALKG 171

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   +P+        V +   L+VE YS+
Sbjct: 172 SVKAVPTRDI---IDVPVNEMLIVELYSK 197


>gi|11228635|gb|AAG33103.1| small ribosomal protein 4 [Dicranum muehlenbeckii]
          Length = 191

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|331091640|ref|ZP_08340474.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403397|gb|EGG82956.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 197

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +        ++ +S        R+ S+   +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGMDPIYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ F +A +  G T  NL+  LESRLD +V+R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYFAKASKMNGMTGDNLMILLESRLDNVVFRMGLARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GD IE+K+K K      +  +    R VPE++ V+ +N+  + 
Sbjct: 114 VLVNGKQVNIPSYLVKAGDTIEIKEKHKGSQRYKDILEVTGGRLVPEWLDVDAENLKGSV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P         V +   L+VE YS+
Sbjct: 174 KELPLR---EAIDVPVDEMLIVELYSK 197


>gi|313892596|ref|ZP_07826183.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E]
 gi|329121298|ref|ZP_08249925.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965]
 gi|313118993|gb|EFR42198.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E]
 gi|327470232|gb|EGF15695.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965]
          Length = 197

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   + + K  RR G N++G PK+                + K S +G+QL  KQK+K 
Sbjct: 1   MATNRNPRFKTSRRFGLNIYGHPKALKR-------QTADAHQKKQSEYGMQLAEKQKVKA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ E++F   + +A R  G    NL++ LE RLD IVYRA F  +I  ARQ VNH  
Sbjct: 54  IY-NLLERQFYRYYDKARRMSGVVGENLLALLERRLDNIVYRAGFARSIRQARQMVNHGL 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY  + G V+ +++  +      ++ ++L   D+P YI  + DN   T 
Sbjct: 113 ISVNGKKVDIPSYSVQPGQVVSLRENYRSNEMFKQSFNELKTFDLP-YIEKSFDNWSVTL 171

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP   +++PY   +    +VE YS+
Sbjct: 172 TRIPLR-EELPYKDEVNETYIVELYSK 197


>gi|63101059|gb|AAY33154.1| small ribosomal protein 4 [Symphysodontella cylindracea]
          Length = 195

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    S+   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLTNKTPQLKSSF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  AR  VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARXLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY+CK  D I +K + K    + +  +  ++  +P +++ ++        +I   L
Sbjct: 117 VDIPSYQCKPQDXITIKNQRKSETIISKNIEFYQKYKIPNHLTYSYLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|50235350|gb|AAT70708.1| Rps4 [Brachythecium percurrens]
 gi|50235366|gb|AAT70716.1| Rps4 [Brachythecium percurrens]
          Length = 195

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFHQKYKIPNHLTYSFLEKKGLVTQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +  +LVVE+YSR
Sbjct: 174 DRESIGLKINESLVVEYYSR 193


>gi|63101061|gb|AAY33155.1| small ribosomal protein 4 [Cryptogonium phyllogonioides]
          Length = 194

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 3   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 58

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 59  LNYVRIARKTKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 118

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY+CK  D I +K++ K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 119 PSYQCKPQDFITIKKQQKSETIITKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRE 175

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 176 SIGLKINELLVVEYYSR 192


>gi|293634049|gb|ADE60404.1| ribosomal protein subunit 4 [Pogonatum perichaetiale]
          Length = 190

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|37992705|gb|AAR06531.1| small ribosomal protein 4 [Thamniopsis sinuata]
          Length = 194

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN   +
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIL 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  + +++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQPKSEAIISKNIEFSQKVKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|28194789|gb|AAO33656.1|AF481011_1 ribosomal protein S4 [Pottia wilsonii]
          Length = 196

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPDLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I + ++ K    V +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQLMVTKNVDFYQKSQIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|3098188|gb|AAC15542.1| small ribosomal protein 4 [Plagiomnium affine]
          Length = 192

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K +      + +     ++  +P +++ N  N      +I       
Sbjct: 117 PSYRCKPQDFITIKDRQTSQTMISKNIDFYQKSKIPNHLTYNSLNKKGLVNQILDRD--- 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIDLKINELLVVEYYSR 190


>gi|49182730|gb|AAT57827.1| small ribosomal protein [Jubula hutchinsiae subsp. pennsylvanica]
          Length = 195

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       ++     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTGRASKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++     PTI +ARQ VNHRH+ +N  +
Sbjct: 57  RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINNYT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VN+ SY C+ GD+I +K + K    + +     ++ ++P ++  N   +     +     
Sbjct: 117 VNVPSYNCEPGDIITIKNREKSQLIITKNINSFQKLEIPNHLIFNSIKLQGFVNQTIRR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --ESIDLKINELLVVEYYSR 193


>gi|21914186|gb|AAM81315.1| ribosomal protein subunit 4 [Rhodobryum umbraculum]
          Length = 198

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 4   RVKIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD ++++    PTI  ARQ VNHRH+LVN R 
Sbjct: 60  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFQLGMAPTIPGARQLVNHRHILVNDRI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L
Sbjct: 120 VNIPSYRCKPEDSITIKDRPKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---L 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 DRESIGLKINELLVVEYYSR 196


>gi|50235342|gb|AAT70704.1| Rps4 [Brachythecium salebrosum]
          Length = 195

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|170516227|gb|ACB15115.1| small ribosomal protein 4 [Dioon spinulosum]
          Length = 194

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K P  +R+        R+    S + ++L  KQK++ +YG ++E
Sbjct: 1   RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE R D  ++R+   PTI  ARQ VNHRH+LVN R 
Sbjct: 56  RQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRSGMAPTIPGARQLVNHRHILVNDRV 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  DVI V+ + +  A + +   L+++D +P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDVITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WISLKINELLVVEYYSR 192


>gi|17025841|gb|AAL32086.1| ribosomal protein 4 [Mitthyridium sp. Wall 1043]
          Length = 195

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L
Sbjct: 117 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNSVEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|22854735|gb|AAN09787.1| small ribosomal protein 4 [Sclerodontium pallidum]
          Length = 190

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K        +++ +  +++  VP +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|281356805|ref|ZP_06243296.1| ribosomal protein S4 [Victivallis vadensis ATCC BAA-548]
 gi|281316932|gb|EFB00955.1| ribosomal protein S4 [Victivallis vadensis ATCC BAA-548]
          Length = 200

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 6/200 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           +KHK  RRIG+ +WG PK P   R Y  G HG+ R+ K S +G  L  KQK+K YY  IS
Sbjct: 7   AKHKFCRRIGQCIWGDPKCPSVKRPYAAGPHGKGRRVKLSTYGELLMEKQKLKNYYA-IS 65

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+ +  + +A    G T   L   LE RLD +V+RA F PTIFAA+QFVNH H+LV+G+
Sbjct: 66  EKQLQIAYAKAKAGTGQTHEKLFRSLEQRLDAMVFRAGFAPTIFAAKQFVNHGHILVDGK 125

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
            ++  S   KEG VI +   + +  ++ E ++     +P Y+ V+ +N+ AT  R P   
Sbjct: 126 RIDRSSCLVKEGQVISI--DAAKSPAIAEIAKKGNSTIPAYMEVDLENLKATLTRAP--- 180

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           +    PV ++   V+E+Y+R
Sbjct: 181 QLEEIPVSVKIMSVIEYYAR 200


>gi|74273231|gb|ABA01315.1| ribosomal protein S4 [Ancistrothyrsus sp. LBF-2005]
          Length = 187

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 10/193 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P+     G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRPI----AGSALQNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I VK + K    +  +       R +P++++++         +I  S       +
Sbjct: 116 KPRDLITVKDEQKSKDLIQNSLDSFPPGRKLPKHLTLDPFQYKGLVNQIIDSK---WVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 QINELLVVEYYSR 185


>gi|77862529|gb|ABB04537.1| small ribosomal protein 4 [Exormotheca pustulosa]
          Length = 201

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+      Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGVLPGLTNKTLKLKSGY---INQSISNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   VNI SY CK  DVI +K   K  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNIVNIPSYTCKPKDVITIKNGPKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            I          + +   LVVE+YSR
Sbjct: 177 EIIDR---EWILLKINELLVVEYYSR 199


>gi|42794634|gb|AAS45716.1| Rps4 [Cavendishia complectens]
 gi|42794673|gb|AAS45733.1| Rps4 [Psammisia ulbrichiana]
 gi|42794693|gb|AAS45743.1| Rps4 [Satyria vargasii]
          Length = 211

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|12330512|gb|AAG52793.1| ribosomal protein 4 [Pleuridium subulatum]
          Length = 189

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A +++    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQAMIIKNIDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|288870170|ref|ZP_06113170.2| ribosomal protein S4 [Clostridium hathewayi DSM 13479]
 gi|288868139|gb|EFD00438.1| ribosomal protein S4 [Clostridium hathewayi DSM 13479]
          Length = 197

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 106/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVDRVPVLKRCRSLGLDPIYLGIDKKSNREL------KRANRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A R  G    NL+  LE RLD +V+R  F  T    RQ V+H+ 
Sbjct: 55  IYGVL-EKPFRNYYAKASRMNGMVGENLMILLERRLDNVVFRMGFGRTRRETRQMVDHKS 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI SY  K GDVIEVK+K K  A   +  +  A R  P ++ V+H+N+  T 
Sbjct: 114 ILVNGKCVNIPSYLVKAGDVIEVKEKCKGNARFKDVVETTAGRLTPAWVDVDHENLRGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KELPTRDE---IDVPVNEMLIVELYSK 197


>gi|17025858|gb|AAL32094.1| ribosomal protein 4 [Mitthyridium sp. Wall 3848]
          Length = 199

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGFGVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I
Sbjct: 117 NNNIVNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSIEKKGLINQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|20531096|gb|AAM27369.1| ribosomal protein 4 [Dicnemon semicryptum]
          Length = 192

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A  ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LNYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A +++    +++  VP +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|78369637|gb|ABB43048.1| ribosomal protein 4 [Calymperes hispidum]
          Length = 199

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGILSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R VNI SY CK  D I +K + K    +++  + + +  +P ++  N         ++
Sbjct: 117 NNRIVNIPSYPCKLHDFITIKDQQKYQTMIVQNIKFSPKYKIPSHLIFNSVEQKGVVNQL 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDQESIGLKINELLVVEYYSR 197


>gi|118577621|gb|ABL07176.1| small ribosomal protein 4 [Piper stipulare]
          Length = 187

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYR
Sbjct: 56  RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRMVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  + + +    V  +   A R ++P++++++         +I  S       +
Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|46811040|gb|AAT01838.1| small ribosomal protein 4 [Phyllothallia nivicola]
          Length = 200

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + K  RR+G       K       Y    +      K S + ++L  KQK++ +YG +
Sbjct: 1   GPRAKSTRRLGFLPGLTNKILELNLGYT---NQSTVNKKISQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN 
Sbjct: 57  TERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIIVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPS 184
            +V+I SY C+  D I +  + +  + + +   L  E  +P +++ +      +  ++ +
Sbjct: 117 DTVDIPSYSCEPKDTITISNRRESQSIITKNMNLFRENKIPNHLTFDSTKSRGSVNQVIN 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 R---EWIDLKINELLVVEYYSR 195


>gi|42556450|gb|AAS19820.1| small ribosomal protein 4 [Lepidolaena taylorii]
          Length = 191

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKKLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHILINNETVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ + K  + +        + ++P ++S+N   +  +            
Sbjct: 117 SYNCEPGDIITIRNREKSQSIITRNMNSFHKSEIPNHLSLNSTQLRGSINTTIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKVNELLVVEYYSR 189


>gi|47606902|gb|AAT36371.1| ribosomal protein subunit 4 [Goniobryum subbasilare]
          Length = 195

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNIYFYQKYKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42405300|gb|AAS13476.1| rps4 small ribosomal protein [Arbusculohypopterygium arbusculum]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYVV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|238922856|ref|YP_002936369.1| 30S ribosomal protein S4 [Eubacterium rectale ATCC 33656]
 gi|259495279|sp|C4ZBU5|RS4_EUBR3 RecName: Full=30S ribosomal protein S4
 gi|238874528|gb|ACR74235.1| 30S ribosomal protein S4 [Eubacterium rectale ATCC 33656]
 gi|291523756|emb|CBK89343.1| SSU ribosomal protein S4P [Eubacterium rectale DSM 17629]
 gi|291528778|emb|CBK94364.1| SSU ribosomal protein S4P [Eubacterium rectale M104/1]
          Length = 197

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +    K  R +G           + R+        R   K S +GLQLR KQK K 
Sbjct: 1   MAVNKVPVLKRCRSLGLEPSYLGYDKKSRRNLT------RANRKVSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +K+AD+ +G T  NL++ LESR+D +++R  F  T   ARQ V+H+ 
Sbjct: 55  IYGVL-EKPFRNYYKKADQMKGLTGLNLMTILESRIDNVIFRLGFARTRKEARQIVDHKF 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATF 179
           V VNG+ VNI SY  K GDVIE+K+  K    + +  ++A  R VPE++ V+ + +  T 
Sbjct: 114 VTVNGKVVNIPSYLVKAGDVIEIKESKKNTQRMKDIVEVAGGRIVPEWLDVDAEKLQGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KDLPTREQ---IDVPVDEMLIVELYSK 197


>gi|63078634|gb|AAY29403.1| ribosomal protein S4 [Tortella tortuosa]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR G       K+P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRFGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|293634055|gb|ADE60407.1| ribosomal protein subunit 4 [Pogonatum subulatum]
          Length = 191

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +++    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPKDFIIIKNQQESQAIIVKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|118577575|gb|ABL07153.1| small ribosomal protein 4 [Piper excelsum]
          Length = 187

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYR
Sbjct: 56  RIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  + + +    V  +   A R ++P++++++         +I  S       +
Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|47606930|gb|AAT36385.1| ribosomal protein subunit 4 [Pyrrhobryum medium]
          Length = 196

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGALPGXTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K + K    + +     ++  +P +++ +         +I   
Sbjct: 117 IVDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYSFLEKKGVVNQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDRESISLKINELLVVEYYSR 194


>gi|67036106|gb|AAY62979.1| small ribosomal protein subunit 4 [Leskea gracilescens]
          Length = 192

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|78102661|gb|ABB21544.1| small ribosomal protein 4 [Plagiochila fruticella]
          Length = 189

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGVLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH+H+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHKHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWLILKINELLVVE 189


>gi|42794632|gb|AAS45715.1| Rps4 [Cavendishia capitulata]
          Length = 211

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
             +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ V H
Sbjct: 57  GFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVTH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKSKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|28194699|gb|AAO33611.1|AF480966_1 ribosomal protein S4 [Oxystegus sinuosus]
 gi|28194751|gb|AAO33637.1|AF480992_1 ribosomal protein S4 [Bryoerythrophyllum recurvirostrum]
          Length = 196

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|63191807|gb|AAY34863.1| small ribosomal protein subunit 4 [Dialytrichia mucronata]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|50235330|gb|AAT70698.1| Rps4 [Scorpiurium circinatum]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFHQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42794679|gb|AAS45736.1| Rps4 [Satyria cerander]
          Length = 211

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K   S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRRTQSRFVKKK--KSQYHIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WIGLKIKELLVVEYYSR 207


>gi|63101047|gb|AAY33148.1| small ribosomal protein 4 [Ischyrodon lepturus]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEVIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|42405306|gb|AAS13479.1| rps4 small ribosomal protein [Thamniopsis incurva]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTISAARQLVNHRHIVVNNYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQPKSEAIITKNIEFYQKIKIPNHLTSNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035676|gb|AAY62769.1| small ribosomal protein subunit 4 [Campylopodiella stenocarpa]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+     +    +       K S + ++L  KQK++ +YG I+E++ 
Sbjct: 3   IIRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 58

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI
Sbjct: 59  LNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNI 118

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    V +    +++  VP +++ N         +I   L   
Sbjct: 119 PSYRCKPQDFITIKNRQKSQFIVAKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LNKE 175

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 176 SIGLKINELLVVEYYSR 192


>gi|37992495|gb|AAR06426.1| small ribosomal protein 4 [Diploneuron connivens]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITEQ 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I     
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQILDRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIGLKINELLVVEYYSR 192


>gi|46486560|gb|AAS98716.1| ribosomal protein subunit 4 [Bescherellia cryphaeoides]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L
Sbjct: 117 VDIASYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|46486566|gb|AAS98719.1| ribosomal protein subunit 4 [Mniodendron camptotheca]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+     ++   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTAQLKSNF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ ++        +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|63191873|gb|AAY34896.1| small ribosomal protein subunit 4 [Leptobarbula berica]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|50235356|gb|AAT70711.1| Rps4 [Brachythecium bolanderi]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|50235344|gb|AAT70705.1| Rps4 [Scleropodium touretii]
 gi|50235372|gb|AAT70719.1| Rps4 [Scleropodium obtusifolium]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|289599959|gb|ADD12930.1| ribosomal protein S4 [Tetracera portobellensis]
          Length = 189

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I S
Sbjct: 56  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I VK + K  A +      +   ++P++++++         +I  S      
Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSPHEELPKHLTLHAFQYKGLVNQIIDSK---WV 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|28194711|gb|AAO33617.1|AF480972_1 ribosomal protein S4 [Phascum cuspidatum]
          Length = 196

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINNRKKSQVIITKNVDFYQKSKIPTHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|67036002|gb|AAY62927.1| small ribosomal protein subunit 4 [Diaphanodon blandus]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67035616|gb|AAY62739.1| small ribosomal protein subunit 4 [Pleurophascum grandiglobum]
          Length = 193

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           SYRCK  D I +K +    A +++        +  VP +++ N         +I   L +
Sbjct: 117 SYRCKPQDFITIKDRQTSQAIIIKNKNVDFSQKYKVPNHLTFNSLEKKGLVNQI---LDE 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|63100983|gb|AAY33116.1| small ribosomal protein 4 [Vesicularia vesicularis]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYIRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIAGARQLVNHRHILVNHCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI  YRCK  D+I +K + K    + +  +  +R  +P +++ +         +I   L 
Sbjct: 117 NISGYRCKPQDIITIKNQQKSETIINKNIEFYQRSKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|50235346|gb|AAT70706.1| Rps4 [Brachythecium leibergii]
 gi|50235368|gb|AAT70717.1| Rps4 [Brachythecium velutinum]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42556420|gb|AAS19805.1| small ribosomal protein 4 [Herbertus sendtneri]
          Length = 188

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K   +  SY   +       K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPSLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY 
Sbjct: 57  RIARKTKGSTGEVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIPSYN 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           C+ GD+I +K K K  + + +   L ++  +P +++ +   +  +  +  +        +
Sbjct: 117 CEPGDIITIKNKQKSQSIITKNISLFQKLKIPSHLTFDSTKLYGSINQTINR---EWINL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|28194765|gb|AAO33644.1|AF480999_1 ribosomal protein S4 [Tortula subulata var. subinermis]
          Length = 196

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIAKKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|50235332|gb|AAT70699.1| Rps4 [Eurhynchium fuegianum]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNYCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|118626055|emb|CAL39336.1| small ribosomal protein 4 [Nowellia curvifolia]
          Length = 191

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  +Y           K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLSNKTLKSKSNYIDP---STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD   +R    PTI  ARQ VNH H+ +N   ++I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTXFRLGMAPTIPGARQLVNHGHISMNNNIIDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K +  + + +   L ++   P +++ N   +  +  ++ +      
Sbjct: 117 SYNCQPGDIITIRNKLESRSMITKNINLFQKLKTPSHLTFNLTELQGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|28194705|gb|AAO33614.1|AF480969_1 ribosomal protein S4 [Acaulon triquetrum]
 gi|28194707|gb|AAO33615.1|AF480970_1 ribosomal protein S4 [Pottia recta]
 gi|28194733|gb|AAO33628.1|AF480983_1 ribosomal protein S4 [Pottia davalliana]
          Length = 196

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|242910210|ref|YP_002970646.1| ribosomal protein S4 [Alsophila spinulosa]
 gi|218454879|gb|ACK77216.1| ribosomal protein S4 [Alsophila spinulosa]
          Length = 207

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 15/213 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+    + K+ RR+        K+  P  TR        Q    K S F ++L AKQ++
Sbjct: 1   MSRYRGPRLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG ++E++     + A +++G T    +  LE RLD I++ +    TI AARQ VNH
Sbjct: 57  RFNYG-LTERQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHD 173
           RH+LVN R V++ SYRCK  D+I V+ +      +      + R  ++P++++      +
Sbjct: 116 RHILVNDRIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGN 175

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  RI          + +   LVVE+YSR
Sbjct: 176 RPKGLVNRI---ANRESIDLNINELLVVEYYSR 205


>gi|18920783|gb|AAL82436.1| ribosomal protein system 4 [Pseudotaxiphyllum laetevirens]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    +       K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R   VPTI  ARQ VNHRH+L+N   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMVPTIPGARQLVNHRHILINDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSQAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67036116|gb|AAY62984.1| small ribosomal protein subunit 4 [Puiggariopsis aurifolia]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQATSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEIIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035618|gb|AAY62740.1| small ribosomal protein subunit 4 [Braunfelsia dicranoides]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSGS---INQSASNKKVSQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNHVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRVV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A +++    +++  VP +++ +         +I   L 
Sbjct: 117 NIPSYRCKPRDFITIKDRQKSQAIIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|63191747|gb|AAY34833.1| small ribosomal protein subunit 4 [Brachymitrion jamesonii]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CEIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKTSQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|158318038|ref|YP_001510546.1| RNA-binding S4 domain-containing protein [Frankia sp. EAN1pec]
 gi|158113443|gb|ABW15640.1| RNA-binding S4 domain protein [Frankia sp. EAN1pec]
          Length = 201

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 7/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
              K+ R IG  L  +       R Y PG HG+ RK+   Y   +LR KQ+++  Y  IS
Sbjct: 5   PVAKLSRSIGLPLTDKAARYFENRPYPPGPHGRGRKTMSPY-KERLREKQRLRFQY-HIS 62

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           EK+ R  F EADR  G T H LI  LE+RLD +V RA F  TI+ ARQFV+HRHV VN  
Sbjct: 63  EKQLRRAFDEADRGAGRTGHLLIEDLETRLDAVVLRAGFAKTIYQARQFVSHRHVQVNSS 122

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLA--SVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184
            V+   YR + GDV+ +  +S+ +A   ++  +Q A    P Y+ V+   +VA   R P+
Sbjct: 123 RVDRPGYRVQPGDVVTIAGRSRPMAPFRIVAETQPAGTAPPAYLDVDRTALVAVLSRRPT 182

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV+    LVVE+Y+R
Sbjct: 183 RPE---IPVVCDEQLVVEYYAR 201


>gi|238763710|ref|ZP_04624669.1| 30S ribosomal protein S4 [Yersinia kristensenii ATCC 33638]
 gi|238698012|gb|EEP90770.1| 30S ribosomal protein S4 [Yersinia kristensenii ATCC 33638]
          Length = 154

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 99/158 (62%), Gaps = 5/158 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QLR KQK+++ YG + E++FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T 
Sbjct: 1   MQLREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATR 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168
             +RQ V+H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++
Sbjct: 60  AESRQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWL 119

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+   M   F RIP           +  +L+VE YS+
Sbjct: 120 EVDAVKMEGVFKRIPERTD---LSADINEHLIVELYSK 154


>gi|78102647|gb|ABB21537.1| small ribosomal protein 4 [Plagiochila dusenii]
          Length = 189

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCQPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|67035662|gb|AAY62762.1| small ribosomal protein subunit 4 [Cheilothela chloropus]
          Length = 192

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI
Sbjct: 57  LNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A +++    +++  VP +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNRQKSQAMIIKNLTFSQKAKVPNHLTFNSLENKGLVNQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|37992443|gb|AAR06400.1| small ribosomal protein 4 [Calyptrochaeta brownii]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + +    + +  +  +   +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDQRESEDIINKNIEFYQNSKIPNHLNYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|75858244|gb|ABA28696.1| small ribosomal protein 4 [Tetracymbaliella cymbalifera]
          Length = 191

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+          +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTGKTL---EPKSSSIDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH+H+L+N   V+I 
Sbjct: 57  KYMRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHQHILINEDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C  GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCSPGDIITIRNKEKSQSIITKNINLFQKLKIPSHLTFDLTQLRGSVNQMINR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|328541146|gb|AEB21797.1| ribosomal protein S4 [Lepidozia setigera]
          Length = 190

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     SY           K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGAPPGLTSKTLKPKSSY---NDRSASNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD  ++R     TI  ARQ VNH+H+ +N   V+I SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNTIFRLGIASTIPGARQLVNHKHISINNNIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  +  +        
Sbjct: 117 NCEPGDIITIRDKQKSRSIITKNVNLFQNLKIPSHLTFDPIKLCGSINQTINR---EWIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|170516229|gb|ACB15116.1| small ribosomal protein 4 [Bowenia spectabilis]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K P  +R+        R+    S + ++L  KQK++ +YG ++E
Sbjct: 1   RLKIIRRLRVLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE R D  ++R     TI  ARQ VNHRH+LVN R 
Sbjct: 56  RQLLQYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHILVNDRV 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  DVI V+ + +  A + +   L+++D +P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDVITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WISLKINELLVVEYYSR 192


>gi|12330452|gb|AAG52763.1| ribosomal protein 4 [Takakia lepidozioides]
          Length = 189

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G +     K+P +   Y   ++      K S + ++L  KQK++ ++G ++E++    
Sbjct: 1   RLGASPGLTNKTPQSKSGY---INQSTSNKKISQYRIRLEEKQKLRFHHG-VTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN R+VNI S+
Sbjct: 57  VRIARRAKGSTGQVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRTVNIPSF 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I  K + K  A + +    +++ ++P ++++N         +I          
Sbjct: 117 RCKPQDFITTKDRQKSQAVITKNMDCSQKSEMPNHLTLNSSQKRGLVNQIIDR---ESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|88856256|ref|ZP_01130916.1| 30S ribosomal protein S4 [marine actinobacterium PHSC20C1]
 gi|88814575|gb|EAR24437.1| 30S ribosomal protein S4 [marine actinobacterium PHSC20C1]
          Length = 220

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 8/205 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
           R  SK ++ R +G  L  +    +  R Y PG HG+ ++ + S + ++LR KQ+++  YG
Sbjct: 17  RTRSKTRLSRALGIALTPKAAKYLEKRPYAPGEHGRTKRKQDSDYAVRLREKQRLRAQYG 76

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I E + +  F+EA ++ G T  NL+  LE RLD ++ R+    T   ARQ + HRH+LV
Sbjct: 77  -IREAQLKIQFEEARKTPGLTGENLVEQLEMRLDALLVRSAIARTTAQARQMIVHRHILV 135

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNMVATF 179
           +G+ V+  S+R K G ++ VK +S+ +     ++     DV    P Y+ V  D + A  
Sbjct: 136 DGQLVDRPSFRVKPGQLMHVKARSEGMEIFQVSAAGGHVDVLPKTPGYLEVEIDKLQARL 195

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFY 204
           VR P   +    PV  +  LVVE+Y
Sbjct: 196 VRRPKRAE---VPVTCEVQLVVEYY 217


>gi|121761814|gb|ABM64993.1| ribosomal protein S4 [Orthomnion bryoides]
 gi|121761825|gb|ABM64998.1| ribosomal protein S4 [Orthomnion nudum]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I +  
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILNRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|42794728|gb|AAS45759.1| Rps4 [Thibaudia parvifolia]
          Length = 211

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S         +K   S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQXXXXXKK--KSQYHIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++ +N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKGKRKRVPYHLXLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|218157229|gb|ACK58431.1| ribosomal protein subunit 4 [Polytrichastrum formosum]
 gi|293633983|gb|ADE60371.1| ribosomal protein subunit 4 [Hebantia rigida]
 gi|293634129|gb|ADE60444.1| ribosomal protein subunit 4 [Polytrichum subpilosum]
          Length = 190

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A +      +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|42794677|gb|AAS45735.1| Rps4 [Satyria boliviana]
 gi|42794689|gb|AAS45741.1| Rps4 [Satyria polyantha]
          Length = 211

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|37992419|gb|AAR06388.1| small ribosomal protein 4 [Aerobryum speciosum]
          Length = 193

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+
Sbjct: 57  LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNQRKSETIIGKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|12642252|gb|AAK00208.1| rps4 [Fissidens subbasilaris]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGILQGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLPEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDHI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K    +++    +++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKDQQKYQIMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|59803309|gb|AAX07763.1| Rps4 [Pallavicinia lyellii]
          Length = 201

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G  L G       +RS         +K   S + ++L  K K++ +YG
Sbjct: 3   YRGPRAKIIRRLGA-LPGVSHKMRXSRSXYTNXXXXGKK--ISXYRIRLEEKXKLRFHYG 59

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E+      + A R++G T   L+  LE RLD I++R    PTI +ARQ VNHRH+L+
Sbjct: 60  -LTERHLVKYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPSARQLVNHRHILI 118

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182
           N  +VNI SY C+  D+I +K + +  + + +   L+ E+ +P +++ +      +  RI
Sbjct: 119 NAYTVNIPSYNCETRDIITIKNRHESQSLITKNMNLSREQRIPNHLTFDLTRFRGSVNRI 178

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 179 TDR---EWIGLKINELLVVEYYSR 199


>gi|89147836|gb|ABD62766.1| ribosomal protein 4 [Noteroclada confluens]
          Length = 192

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K   +   Y   ++      K S + ++L  KQK++ +YG ++E++  
Sbjct: 3   IRRLGVLPGLTSKIVESKSGY---INQPTSSKKVSQYRIRLEEKQKLRFHYG-LTERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 59  KYVRIARKAKGSTGEVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHILINDNMVDIP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY C+ GDVI VK + +  + + +  +     +P ++++N      +  ++ +       
Sbjct: 119 SYNCEPGDVITVKNRRESQSIIAKNMEFQRPKIPNHLTLNSIPFQGSVNQVINR---ECI 175

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 176 DLKINELLVVEYYSR 190


>gi|121761775|gb|ABM64974.1| ribosomal protein S4 [Plagiomnium rhynchophorum]
 gi|121761798|gb|ABM64985.1| ribosomal protein S4 [Plagiomnium integrum]
 gi|121761800|gb|ABM64986.1| ribosomal protein S4 [Plagiomnium rhynchophorum]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 IDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---FIDLKINELLVVEYYSR 193


>gi|37992593|gb|AAR06475.1| small ribosomal protein 4 [Meteoriopsis reclinata]
 gi|67035996|gb|AAY62924.1| small ribosomal protein subunit 4 [Barbellopsis trichophora]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|28194831|gb|AAO33677.1|AF481032_1 ribosomal protein S4 [Syntrichia papillosa]
          Length = 196

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L+N R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|47606914|gb|AAT36377.1| ribosomal protein subunit 4 [Mesochaete undulata]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN + 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDQI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY+CK  D I +K + K  A + +     ++  +P ++  +         +I   L
Sbjct: 117 VDIPSYQCKPQDFITIKDRQKSQAIISKNIYFYQKYKIPNHLIYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|329938951|ref|ZP_08288325.1| 30S ribosomal protein S4 [Streptomyces griseoaurantiacus M045]
 gi|329301836|gb|EGG45729.1| 30S ribosomal protein S4 [Streptomyces griseoaurantiacus M045]
          Length = 204

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A +++G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-VSERQLVRAYERAAKTQGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R K  DV+ V+++S++      A +     E + P Y+ VN   +  
Sbjct: 119 IEVNGHKVDKPSFRVKPDDVVMVRERSREKTLFSIAREGGFAPEGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204


>gi|325663035|ref|ZP_08151485.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086642|ref|ZP_08335719.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470489|gb|EGC73719.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409808|gb|EGG89243.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 197

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +        ++ +S        R+ S+   +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGMDPIYLG---IDKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ F +A +  G T  NL+  LESRLD +V+R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYFAKAQKMNGMTGDNLMILLESRLDNVVFRLGLARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+K+K+K      +  +    R VP+++  + +N+  T 
Sbjct: 114 VLVNGKQVNIPSYLVKAGDVIEIKEKNKGSQRYKDILEVTGGRMVPDWLEADAENLKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P         V +   L+VE YS+
Sbjct: 174 KELPLR---EAIDVPVDEMLIVELYSK 197


>gi|12642258|gb|AAK00211.1| rps4 [Splachnum sphaericum]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CKIIRRLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P ++  N         +I     
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIGLKINELLVVEYYSR 192


>gi|63078638|gb|AAY29405.1| ribosomal protein S4 [Tortella tortuosa]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|18568420|gb|AAL76079.1| ribosomal protein system 4 [Calliergon cordifolium]
          Length = 193

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+
Sbjct: 57  LLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|67035897|gb|AAY62875.1| small ribosomal protein subunit 4 [Orthotheciella varia]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|33413225|emb|CAD86748.1| ribosomal protein small subunit 4 [Oncophorus wahlenbergii]
          Length = 188

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNRQKSQAMIIKNVDFSQKTKIPNHLTFNSLEKKGLVNQI---LDQESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|49182770|gb|AAT57847.1| small ribosomal protein [Odontolejeunea lunulata]
          Length = 192

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K           +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTGKISKTK------IDRSVLNKKISQYRIRLEEKQKLRFHYG-LTE 53

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++      TI +ARQ VNH+H+ +N   
Sbjct: 54  RQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHKHIFINNDI 113

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +     
Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNMNLSKKLQIPNHLTFDSIQLRGLVNQTIRR- 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 --EWINLKINELLVVEYYSR 190


>gi|3098220|gb|AAC15558.1| small ribosomal protein 4 [Macromitrium levatum]
          Length = 199

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
                 +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPCGRIIRRLGALPGSTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K    + +     ++  +P ++  N         +I
Sbjct: 117 NYRMVDIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRELIGLKINELLVVEYYSR 197


>gi|46811004|gb|AAT01820.1| small ribosomal protein 4 [Fossombronia foveolata]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E
Sbjct: 1   RAKMIRRLGVLPGLTDRIVEPRSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +
Sbjct: 57  RQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  +     
Sbjct: 117 VNIPSYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDLTRLRGSINQTIDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---WIDLKINELLVVEYYSR 193


>gi|46810998|gb|AAT01817.1| small ribosomal protein 4 [Pellia sp. LLF-2004]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 8/201 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K  +   S   G     +K   S + ++L  KQK++ +YG +
Sbjct: 1   GPRTKIIRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQILSQTLEMRLDNIIFRLGMSPTIPGARQLVNHRHILIND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
            +V+I SY C+  DVI V  + K+   +       +  VP +++ +      +  +    
Sbjct: 117 DTVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 ---ECIDLKINELLVVEYYSR 193


>gi|29027190|gb|AAN47157.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027192|gb|AAN47158.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
 gi|29027194|gb|AAN47159.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
          Length = 194

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQAIIGKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63191697|gb|AAY34810.1| small ribosomal protein subunit 4 [Plagiobryum zierii]
          Length = 195

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + +  A + +   L  E   P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPEDSITIKDRQESQAVISKNLNLYQEYKTPNHLTYNFLKKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67035865|gb|AAY62859.1| small ribosomal protein subunit 4 [Rhaphidostichum schwaneckeanum]
          Length = 192

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQPASNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  E+  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYEKSKIPNHLTYNSLEKKGLINQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|328488156|gb|AEB19891.1| small ribosomal protein 4 [Pachyschistochila childii]
          Length = 191

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G +     K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGISPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +          +    
Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVN---ERIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|293634063|gb|ADE60411.1| ribosomal protein subunit 4 [Polytrichadelphus ciliatus]
          Length = 190

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y        +K   S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGYINQQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SY
Sbjct: 58  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A ++     +++  +P +++ N         +I   L      
Sbjct: 118 RCKPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 174

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 175 LKINELLVVEYYSR 188


>gi|28194725|gb|AAO33624.1|AF480979_1 ribosomal protein S4 [Pseudocrossidium hornschuchianum]
          Length = 196

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +    +++  +P ++S N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDSSQKSKIPNHLSFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LNQESIGLKINELLVVEYYSR 194


>gi|17025845|gb|AAL32088.1| ribosomal protein 4 [Mitthyridium sp. Wall 3653]
          Length = 199

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 5   RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 60

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 61  RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNM 120

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L
Sbjct: 121 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNFVEKKGLVNQI---L 177

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 178 DQESIGLKINELLVVEYYSR 197


>gi|28194769|gb|AAO33646.1|AF481001_1 ribosomal protein S4 [Tortula canescens]
 gi|28194771|gb|AAO33647.1|AF481002_1 ribosomal protein S4 [Tortula canescens]
          Length = 196

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I + ++ K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINERKKSQIMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|289599907|gb|ADD12904.1| ribosomal protein S4 [Hibbertia cuneiformis]
          Length = 189

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I S
Sbjct: 56  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I VK + K  A +      +   ++P+Y++++         +I  S      
Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSSHEELPKYLTLHPFQYKGLVNQIIDSK---WV 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|21914158|gb|AAM81301.1| ribosomal protein subunit 4 [Rosulabryum capillare]
          Length = 194

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVTQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|283824452|gb|ADB43042.1| small ribosomal protein 4 [Cyanolophocolea echinella]
 gi|283824454|gb|ADB43043.1| small ribosomal protein 4 [Cyanolophocolea echinella]
 gi|283824456|gb|ADB43044.1| small ribosomal protein 4 [Cyanolophocolea echinella]
 gi|283824458|gb|ADB43045.1| small ribosomal protein 4 [Cyanolophocolea echinella]
 gi|283824460|gb|ADB43046.1| small ribosomal protein 4 [Cyanolophocolea echinella]
 gi|283824464|gb|ADB43048.1| small ribosomal protein 4 [Cyanolophocolea echinella]
 gi|283824466|gb|ADB43049.1| small ribosomal protein 4 [Cyanolophocolea echinella]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKILKPKASY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 57  KYMRIARKAKGSTGQILLQLLEMRPDNTIFRLGMSSTIPEARQLVNHRHISINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD I +K K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDTITIKNKQKSQSVITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|33413253|emb|CAD86761.1| ribosomal protein small subunit 4 [Syrrhopodon prolifer]
          Length = 193

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KIIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VN
Sbjct: 57  LLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           I SY+CK  D I +K + K    +++ +   ++  +P ++  N         +I   L  
Sbjct: 117 IPSYQCKPQDFITIKDQQKYQTMIIKNTNFFSKHKIPNHLIFNSVEKKGLVNQI---LDQ 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|12642248|gb|AAK00206.1| rps4 [Archidium donnellii]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     +    ++      K S    +L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLTNKTSELKSNS---VNQSTSNKKISQXRXRLXEKQKLRSHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNXI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  + V++    +++  VP ++++N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITIKNRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 NHESIGLKINELLVVEYYSR 193


>gi|3098166|gb|AAC15531.1| small ribosomal protein 4 [Anomobryum julaceum]
 gi|24473830|gb|AAL82759.1| small ribosomal subunit protein 4 [Bryum russulum]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|121761881|gb|ABM65026.1| ribosomal protein S4 [Plagiomnium maximoviczii]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---FIDLKINELLVVEYYSR 193


>gi|328488180|gb|AEB19903.1| small ribosomal protein 4 [Schistochila sciurea]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     S    +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKTLKTKSSS---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  V+R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMATTIPGARQLVNHRHILINNNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K + K  + + +   L  +  +P +++ +   +     +         
Sbjct: 117 SYNCELGDIIAIKNEQKSQSIITKNLNLLHKLKIPNHLTFDSTQLRGLINQKIHR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|78369643|gb|ABB43051.1| ribosomal protein 4 [Calymperes couguiense]
          Length = 198

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D I +K + K    +++ +  + +  +P ++  N         ++ 
Sbjct: 117 NRIVNIPSYQCKLQDFITIKDQQKYQTMIVKNTNFSPKYKIPSHLMFNSVEKKGVVNQL- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDQESIGLKINELLVVEYYSR 196


>gi|289599935|gb|ADD12918.1| ribosomal protein S4 [Hibbertia scandens]
          Length = 189

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I S
Sbjct: 56  YVRIAGKAKGATGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I VK + K  A +      +   ++P+Y++++         +I  S      
Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSSHEELPKYLTLHPFQYKGLVNQIIDSK---WV 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|121761792|gb|ABM64982.1| ribosomal protein S4 [Orthomnion elimbatum]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRN 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|42794681|gb|AAS45737.1| Rps4 [Satyria grandifolia]
          Length = 211

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K   S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRRTQSRFVKKK--KSQYHIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|47606888|gb|AAT36364.1| ribosomal protein subunit 4 [Calomnion complanatum]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|77862521|gb|ABB04533.1| small ribosomal protein 4 [Corsinia coriandra]
          Length = 201

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR+G       K+      Y   ++      K S + ++L  KQK++ +
Sbjct: 1   SRYRGPRVKIIRRLGVLPGLTNKTLKIKSGY---INQSISNKKVSQYRIRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+
Sbjct: 58  YG-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHI 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFV 180
           L+N   VNI SY CK  DVI +K + K  + + +     ++  +P +++ +   +     
Sbjct: 117 LINNNIVNIPSYTCKPKDVITIKNQLKSQSIITKNLNSFQKQKIPNHLTFDLMQVKGLIN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            I          + +   LVVE+YSR
Sbjct: 177 EIIDR---EWILLKINELLVVEYYSR 199


>gi|28194753|gb|AAO33638.1|AF480993_1 ribosomal protein S4 [Tortula inermis]
 gi|28194757|gb|AAO33640.1|AF480995_1 ribosomal protein S4 [Tortula inermis]
 gi|28194759|gb|AAO33641.1|AF480996_1 ribosomal protein S4 [Tortula inermis]
 gi|28194761|gb|AAO33642.1|AF480997_1 ribosomal protein S4 [Tortula inermis]
          Length = 196

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRFGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|67036058|gb|AAY62955.1| small ribosomal protein subunit 4 [Mahua enervis]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITMKNQRKSEAIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035953|gb|AAY62903.1| small ribosomal protein subunit 4 [Curvicladium kurzii]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|295093660|emb|CBK82751.1| SSU ribosomal protein S4P [Coprococcus sp. ART55/1]
          Length = 197

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/208 (37%), Positives = 112/208 (53%), Gaps = 13/208 (6%)

Query: 1   MSKRESSKHKIDRRIG-ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M+   +   K  R +G E ++       N R         R   K S +GLQLR KQK K
Sbjct: 1   MAVDRTPVLKRCRSLGMEPMYLGIDKKSNRRP-------NRSNRKQSEYGLQLREKQKAK 53

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + EK FR+++ +A++ +G T  NL++ LE RLD I++R  F  T   ARQ V+H+
Sbjct: 54  FIYGVL-EKPFRNLYAKAEQQKGLTGPNLMTLLELRLDNIIFRLGFARTRREARQIVDHK 112

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVAT 178
           HVLVNG+ VNI SY  K GD IE+++KSK L    +     E   VP +++ + DN+   
Sbjct: 113 HVLVNGKCVNIPSYSVKPGDKIEIREKSKSLQRYKDIMAATEGVLVPGWLTADRDNLAGE 172

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V  PS  +     V +   L+VE YS+
Sbjct: 173 VVEKPSREQ---IDVPVNETLIVELYSK 197


>gi|37683552|gb|AAQ98827.1| small ribosomal protein 4 [Pogonatum fastigiatum]
          Length = 190

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFIAIKNRQESQAIIAKNINFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|37548835|gb|AAO32686.1| ribosomal protein 4 [Atrichum undulatum]
          Length = 192

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI
Sbjct: 57  LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A        +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNRQEFQAITTRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIDLEINELLVVEYYSR 190


>gi|325678657|ref|ZP_08158267.1| ribosomal protein S4 [Ruminococcus albus 8]
 gi|324109707|gb|EGC03913.1| ribosomal protein S4 [Ruminococcus albus 8]
          Length = 198

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  + +G +      +    R          ++ K S +GLQL+ KQK++ 
Sbjct: 1   MAVNREPILKRCKYLGISPMVMGVAKETKRDP-----NANKRKKVSEYGLQLKEKQKLRF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   F+ A +  G    NL++ LESRLD++V+R     T   ARQ V H H
Sbjct: 56  IYGVL-EKQFHHYFEIAQKMEGQAGTNLLTILESRLDSVVFRMGLSMTRREARQLVVHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG+ V+I SYR K GDVI +K+ SK+     +  +  A R VP ++ ++ +N  A  
Sbjct: 115 FLVNGKRVDIPSYRVKAGDVISLKENSKKSPKFKQIIEATAGRVVPTWLDMDKENQTAKV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P           ++ +L+VE YS+
Sbjct: 175 VRMPVK---EDLDYEIEEHLIVELYSK 198


>gi|7576753|gb|AAF63973.1| small ribosomal protein 4 [Atrichum angustatum]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI 
Sbjct: 57  NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +      +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQEFQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLEINELLVVEYYSR 189


>gi|225026390|ref|ZP_03715582.1| hypothetical protein EUBHAL_00639 [Eubacterium hallii DSM 3353]
 gi|224956279|gb|EEG37488.1| hypothetical protein EUBHAL_00639 [Eubacterium hallii DSM 3353]
          Length = 197

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R +  +      +  + R         R   K S +GLQLR KQK K 
Sbjct: 1   MAIDRTPVLKRCRSLDMDPVYLGVNKKSNRKLV------RSSRKISEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +  A+R +G T  NL+  LESRLD +V+R  F  T   ARQ V H+H
Sbjct: 55  IYGVL-EKPFRNYYATAERMKGLTGPNLMVLLESRLDNVVFRMGFARTRKEARQIVGHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNG+ VNI SYR K GDV+E+K+  K +    +  +      VP ++  + + +  T 
Sbjct: 114 VLVNGKCVNIPSYRIKAGDVVEIKENKKTMQRYKDIVEATGGVLVPAWLDADIEELKGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +PS        V +   L+VE YS+
Sbjct: 174 KELPSRD---MIDVPVNETLIVELYSK 197


>gi|222103542|gb|ACM44300.1| small ribosomal protein subunit 4 [Hylocomium splendens]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|209969115|emb|CAR92805.1| ribosomal protein S4 [Iris vorobievii]
          Length = 187

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P      G  L    R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRP----RSGSDLKNHLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  K K +  A +          ++P +++++         +I  S       +
Sbjct: 116 CKPRDIITTKDKQRSKALIQNFMASSPHEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|42794708|gb|AAS45749.1| Rps4 [Themistoclesia epiphytica]
          Length = 211

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 21/217 (9%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPV--NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P   N+R        +    K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKKRRLGALPGLTNKKPKPGNSRRTQS----RXXXXKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---------AERDVPEYIS 169
           RHVLVNGR ++I SYRCK  D+I  ++  K  A +  + Q            + VP +++
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE--KSRALIQNSFQNLFDLPSHKGKRKRVPYHLT 173

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +N         +I ++       + ++  LVVE+YSR
Sbjct: 174 LNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|18920789|gb|AAL82439.1| ribosomal protein system 4 [Rhizofabronia sphaerocarpa]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVNDFI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K K      + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNKQNSQTIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 NRESIGLKINELLVVEYYSR 193


>gi|157887714|emb|CAM33379.1| ribosomal protein S4 [Leptodontium paradoxum]
 gi|157887716|emb|CAM33380.1| ribosomal protein S4 [Leptodontium paradoxum]
          Length = 197

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 7/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S            K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSST--NQSTTSNKKISQYRIRLEEKQKLRFHYG-IT 57

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 58  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNR 117

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 118 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI--- 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 175 LDQESIGLKINELLVVEYYSR 195


>gi|12642260|gb|AAK00212.1| rps4 [Tayloria scabriseta]
          Length = 193

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 3   IRRLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 59  NYVRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L    
Sbjct: 119 SYRCKPQDFITIKDRVKSQAIINKNIEFXQKYKIPNHLTYNSLKKQGLVNQI---LDRES 175

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 176 IGLKINELLVVEYYSR 191


>gi|11228623|gb|AAG33097.1| small ribosomal protein 4 [Campylopus atrovirens]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     +    +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTFQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  + + +  + +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQSIIAKNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLNINELLVVEYYSR 189


>gi|67035949|gb|AAY62901.1| small ribosomal protein subunit 4 [Metaneckera menziesii]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +L ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63191887|gb|AAY34903.1| small ribosomal protein subunit 4 [Weisiopsis anomala]
          Length = 199

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+     S     +      K S + ++L  KQK++ +YG
Sbjct: 1   YPGRRVRIIRRLGILPGLTNKTSQLKSSST---NQPTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   +NI SY CK  D I +K + K  A + +    +++  VP ++  N         +I
Sbjct: 117 NNSLINIPSYCCKPQDFITIKDQQKSQALITKNIDFSQKQKVPNHLIFNLLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +    VVE+YSR
Sbjct: 177 ---LDPEXVGLKINELXVVEYYSR 197


>gi|63191757|gb|AAY34838.1| small ribosomal protein subunit 4 [Schlotheimia torquata]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+          ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTSQLK---YNSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++D +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDSITIKDRRKSQDIINKNIDFYQKDKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           +     + +   LVVE+YSR
Sbjct: 174 ERELIGLKINELLVVEYYSR 193


>gi|42556488|gb|AAS19839.1| small ribosomal protein 4 [Porella platyphylla]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGFTAKTLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  ++G T   L+  LE RLD  ++      TI  ARQ VNH+H+ +N  +V+I 
Sbjct: 57  KYVRTARNAKGSTGQILLQLLEMRLDNTIFCLGMASTIPGARQLVNHKHISINNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ + K  + +       ++ ++P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDIITIRNREKSQSIITRNINSFKKLEIPNHLTFDSTQLRGSVNQMINR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKVNELLVVEYYSR 189


>gi|67035620|gb|AAY62741.1| small ribosomal protein subunit 4 [Dicranoloma eucamptodontoides]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRMIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK + K  A +++  + +++  VP +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFITVKNRQKSQAMIIKNLEFSQKYKVPNHLTFSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|317054794|ref|YP_004103261.1| 30S ribosomal protein S4 [Ruminococcus albus 7]
 gi|315447063|gb|ADU20627.1| ribosomal protein S4 [Ruminococcus albus 7]
          Length = 198

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  + +G +      +    R          ++ K S +GLQL+ KQK++ 
Sbjct: 1   MAVNREPILKRCKYLGISPMVMGVAKETKRDP-----NANKRKKVSEYGLQLKEKQKLRF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   F+ A +  G    NL++ LESRLD++V+R     T   ARQ V H H
Sbjct: 56  IYGVL-EKQFHHYFEIAQKMEGQAGTNLLTILESRLDSVVFRMGLSMTRREARQLVVHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
            LVNG+ V+I SYR K GDVI +K+ SK+     +  +  A R VP ++ ++ +N  A  
Sbjct: 115 FLVNGKRVDIPSYRIKAGDVISLKENSKKSPKFKQIIETTAGRVVPTWLDMDKENQTAKV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR+P           ++ +L+VE YS+
Sbjct: 175 VRMPVK---EDLDYEIEEHLIVELYSK 198


>gi|63078656|gb|AAY29414.1| ribosomal protein S4 [Weissia controversa var. densifolia]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|3098216|gb|AAC15556.1| small ribosomal protein 4 [Aulacomnium androgynum]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSEAIINKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|30468054|ref|NP_848941.1| ribosomal protein S4 [Cyanidioschyzon merolae strain 10D]
 gi|30409154|dbj|BAC76103.1| 30S ribosomal protein S4 [Cyanidioschyzon merolae strain 10D]
          Length = 190

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 109/206 (52%), Gaps = 19/206 (9%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       KSP N R+  PG H  + +    Y  +QL+ KQK++ 
Sbjct: 1   MSRYLGPRVRIIRRLGILPAFTNKSP-NKRTGVPGEHAHKTRKLSEY-AVQLQEKQKLQY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG I+  +    F++A +SR  T   L+  LE+RLD +VYRA F PT+ AARQ VNH H
Sbjct: 59  YYG-ITNNQLARYFRQAKKSRASTGIELLKMLETRLDHVVYRAGFAPTLPAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  V I S+ C+   +IEVK KS   A            +P Y+ V +      FV
Sbjct: 118 VKVNGNQVTIASFACQVNHIIEVKAKSPSSAQ-----------LPPYLQVEN-----QFV 161

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++   ++       +   LVVE+Y+R
Sbjct: 162 KMIQPVEKDWLAFRVNELLVVEYYTR 187


>gi|313904924|ref|ZP_07838295.1| ribosomal protein S4 [Eubacterium cellulosolvens 6]
 gi|313470181|gb|EFR65512.1| ribosomal protein S4 [Eubacterium cellulosolvens 6]
          Length = 197

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +         + R        +  + K S +G+QLR KQK K 
Sbjct: 1   MAVDRVPVLKRCRSLGLDPTYLGIDKKSRRQL------RNNRRKISEYGMQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +ADR +G T  NL++ LE RLD +++R     T   ARQ V+H+ 
Sbjct: 55  IYGVL-EKPFRNYYAKADRMKGQTGDNLMALLEMRLDNVIFRLALARTRKEARQIVDHKF 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATF 179
           V VNG+ VNI SY+ K GDVIE+K+  K    + + A   A R VP ++ VN D +  T 
Sbjct: 114 VTVNGKVVNIPSYQVKPGDVIEIKESKKTTQRMKDVADATAGRVVPAWLDVNADALQGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+        V +    +VE YS+
Sbjct: 174 KQVPTRD---MIDVPVDDMSIVELYSK 197


>gi|20531126|gb|AAM27383.1| ribosomal protein 4 [Rhizomnium punctatum]
          Length = 193

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K P          +      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KIIRRLGTLPGLSNKIPQLKSGS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+
Sbjct: 57  LLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNNRLVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +   L+++  +P +++ N  N      +I   L  
Sbjct: 117 IPSYRCKPQDFITIKDRQKSQTIIGKTLDLSQKSKIPNHLTYNSLNKKGFVTQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIELKINELLVVEYYSR 191


>gi|63078615|gb|AAY29394.1| ribosomal protein S4 [Tortella densa]
          Length = 193

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VN
Sbjct: 57  LLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKFKIPNHLTFNSLEKKGLVNQI---LDQ 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|11228621|gb|AAG33096.1| small ribosomal protein 4 [Campylopus argyrocaulon]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     +    +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  + +    + +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLNINELLVVEYYSR 189


>gi|121761750|gb|ABM64962.1| ribosomal protein S4 [Rhizomnium appalachianum]
          Length = 195

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P          +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKIPQLKSGS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNNRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +   L+++  +P +++ N  N      +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQTIIGKTLDLSQKSKIPNHLTYNSLNKKGFVTQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIELKINELLVVEYYSR 193


>gi|37992639|gb|AAR06498.1| small ribosomal protein 4 [Papillaria imponderosa]
          Length = 193

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+
Sbjct: 57  LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|293634095|gb|ADE60427.1| ribosomal protein subunit 4 [Polytrichastrum ohioense]
          Length = 190

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R     TI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A +      +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|42556440|gb|AAS19815.1| small ribosomal protein 4 [Lejeunea catanduana]
          Length = 188

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 11/196 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K           L       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTSKISKTK------LDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++      TI  ARQ VNH+H+ +N   VNI 
Sbjct: 54  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHKHIFINDYIVNIP 113

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY+CK GD+I +K K+K  + + +   L+++  +P +++ +   +     +         
Sbjct: 114 SYKCKPGDIITIKNKAKSQSIINKNINLSQKLQIPNHLTFDSTKLQGLVNQTIRR---EW 170

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 171 IDLKINELLVVEYYSR 186


>gi|7109193|gb|AAF36672.1| ribosomal protein 4 [Amphidium lapponicum]
          Length = 190

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGVLPGLTNKTPQLKSXS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ V HRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVXHRHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +    +++  +P ++S N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQKSQAMIXKNXDFSQKXKIPNHLSFNSLEKKGLVNKI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|22854683|gb|AAN09761.1| small ribosomal protein 4 [Bruchia flexuosa]
          Length = 191

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +L+    +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAMILKNVDFSQKSKVPNHLTFNSLEKKGVVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|28194667|gb|AAO33595.1|AF480950_1 ribosomal protein S4 [Didymodon australasiae]
          Length = 196

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    V +    +++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINNRKKSQVMVAKNVDFSQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L+     + +   LVVE+YSR
Sbjct: 174 LEQESIGLKINELLVVEYYSR 194


>gi|67035905|gb|AAY62879.1| small ribosomal protein subunit 4 [Pseudocalliergon angustifolium]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992501|gb|AAR06429.1| small ribosomal protein 4 [Distichophyllum pulchellum]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKILQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N+        +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEVIINKNIEFYQKSKIPNHLTYNYLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CESIGLKINELLVVEYYSR 192


>gi|37992691|gb|AAR06524.1| small ribosomal protein 4 [Stenodictyon pallidum]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K      S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKLIRRLGVLPGLTNKIAELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  + +++  +P +++ N         +I     
Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEAIISKNIEFSQKIKIPNHLTYNFLEKKGLINQILDRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIGLKINELLVVEYYSR 192


>gi|37992439|gb|AAR06398.1| small ribosomal protein 4 [Callicostellopsis meridensis]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSPSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKVKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035913|gb|AAY62883.1| small ribosomal protein subunit 4 [Gradsteinia andicola]
 gi|67035915|gb|AAY62884.1| small ribosomal protein subunit 4 [Hygroamblystegium varium]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67036086|gb|AAY62969.1| small ribosomal protein subunit 4 [Renauldia mexicana]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|227345139|gb|ACP28122.1| small ribosomal protein 4 [Clasmatocolea trachypus]
          Length = 189

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G        +     SY   +       K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGALPGLTSTTLKRKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-MTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY
Sbjct: 57  MRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  +  ++          
Sbjct: 117 NCEPGDIITVRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMIDR---EWIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|49182671|gb|AAT57798.1| small ribosomal protein [Metzgeria frontipilis]
          Length = 195

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P +++ +   ++ +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQKRYRSIIMETLNSVQKPGIPNHLAFDSTKIIGSVNRMINR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWIDLKINELLVVEYYSR 193


>gi|28194665|gb|AAO33594.1|AF480949_1 ribosomal protein S4 [Triquetrella tristicha]
 gi|28194735|gb|AAO33629.1|AF480984_1 ribosomal protein S4 [Triquetrella arapilensis]
 gi|157887692|emb|CAM33368.1| ribosomal protein S4 [Triquetrella arapilensis]
 gi|157887694|emb|CAM33369.1| ribosomal protein S4 [Triquetrella californica]
 gi|157887696|emb|CAM33370.1| ribosomal protein S4 [Triquetrella papillata]
 gi|157887700|emb|CAM33372.1| ribosomal protein S4 [Triquetrella patagonica]
 gi|157887702|emb|CAM33373.1| ribosomal protein S4 [Triquetrella patagonica]
 gi|157887704|emb|CAM33374.1| ribosomal protein S4 [Triquetrella mxinwana]
 gi|157887706|emb|CAM33375.1| ribosomal protein S4 [Triquetrella mxinwana]
 gi|157887708|emb|CAM33376.1| ribosomal protein S4 [Triquetrella mxinwana]
 gi|157887710|emb|CAM33377.1| ribosomal protein S4 [Triquetrella tristicha]
 gi|157887712|emb|CAM33378.1| ribosomal protein S4 [Triquetrella tristicha]
          Length = 196

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|63101003|gb|AAY33126.1| small ribosomal protein 4 [Rigodiadelphus robustus]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE+RLD  ++R    PTI  ARQ VNHRH+LVN    
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLETRLDNXIFRLGMAPTIPGARQLVNHRHILVNDCIX 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +   +  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIXKNIEFYPKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|50235348|gb|AAT70707.1| Rps4 [Homalothecium megaptilum]
          Length = 195

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|37992701|gb|AAR06529.1| small ribosomal protein 4 [Thamniopsis cruegeriana]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKLIRRLGVLPGLTNKIPELKSSS---IAQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  + +++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFSQKMKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992499|gb|AAR06428.1| small ribosomal protein 4 [Distichophyllidium nymanianum]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K      +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKVFQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CESIGLKINELLVVEYYSR 192


>gi|12330554|gb|AAG52814.1| ribosomal protein 4 [Catoscopium nigritum]
          Length = 189

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +    +++  VP +++ N         +I          
Sbjct: 117 RCKPQDFISIKDQQKSQAIIXKNIDFSQKAKVPNHLTFNFLQKNGLVNQILDRD---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|328488160|gb|AEB19893.1| small ribosomal protein 4 [Pachyschistochila nivicola]
 gi|328488162|gb|AEB19894.1| small ribosomal protein 4 [Pachyschistochila subhyalina]
 gi|328488166|gb|AEB19896.1| small ribosomal protein 4 [Pachyschistochila virescens]
          Length = 191

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G +     K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGISPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|63145906|gb|AAY33891.1| small ribosomal protein 4 [Jensenia wallisii]
          Length = 198

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
              KI RR+G  L G     + +RS            K S + ++L  KQK++ +YG ++
Sbjct: 3   PXRKIIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-LT 58

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+L+N  
Sbjct: 59  ERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILINDD 118

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
            VNI SY CK  DVI +K + +  + + +   L  E+ +P +++ +      +  +I   
Sbjct: 119 IVNIPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVNQIIDR 178

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 179 ---EWISLKINELLVVEYYSR 196


>gi|37992615|gb|AAR06486.1| small ribosomal protein 4 [Orthostichidium pentagonum]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNSCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992471|gb|AAR06414.1| small ribosomal protein 4 [Crosbya straminea]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G  L G        +S            K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGV-LPGLTNKVFELKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQKKSEVIINKNIEFYQKSKIPTHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CESIGLKINELLVVEYYSR 192


>gi|21220006|ref|NP_625785.1| 30S ribosomal protein S4 [Streptomyces coelicolor A3(2)]
 gi|256788896|ref|ZP_05527327.1| 30S ribosomal protein S4 [Streptomyces lividans TK24]
 gi|289772782|ref|ZP_06532160.1| 30S ribosomal protein S4 [Streptomyces lividans TK24]
 gi|26399515|sp|Q9KXP5|RS4_STRCO RecName: Full=30S ribosomal protein S4
 gi|8249964|emb|CAB93385.1| 30S ribosomal protein S4 [Streptomyces coelicolor A3(2)]
 gi|289702981|gb|EFD70410.1| 30S ribosomal protein S4 [Streptomyces lividans TK24]
          Length = 204

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQPRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A ++   T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-LSERQLVRAYERASKTNMKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG+ V+  S+R +  DV++V+++SK+      A +     + + P Y+ VN   +  
Sbjct: 119 IQVNGQKVDKPSFRVRPDDVVQVRERSKEKTLFTIAREGGFAPDGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204


>gi|3098210|gb|AAC15553.1| small ribosomal protein 4 [Tayloria orthodonta]
          Length = 190

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PT+  ARQ VNHRH+LVN R V+I S
Sbjct: 57  YVRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNDRIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  + +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQQKSQAIINKNIEFSQKSKIPNHLTYNSLKKQGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|222103456|gb|ACM44257.1| small ribosomal protein subunit 4 [Niphotrichum ericoides]
          Length = 200

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 5   RVRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 60

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R 
Sbjct: 61  RQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRI 120

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A +++    +++  +P +++ N         +I   L
Sbjct: 121 VNIPSYRCKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLAFNSLENKGLINQI---L 177

Query: 187 KDVPYPVIMQPNLVVEFYS 205
                 + +   LVVE++S
Sbjct: 178 DHESIGLKINELLVVEYHS 196


>gi|121761802|gb|ABM64987.1| ribosomal protein S4 [Orthomnion dilatatum]
 gi|121761804|gb|ABM64988.1| ribosomal protein S4 [Orthomnion dilatatum]
          Length = 195

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGPTNKTPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N  N      +I    
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQIIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRN 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIDLKINELLVVEYYSR 193


>gi|67035672|gb|AAY62767.1| small ribosomal protein subunit 4 [Brothera leana]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI R +G       K+     +    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRXLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    V +  +L+++  VP +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNRQKSQFIVAKNIELSQKYKVPNHLTFNSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 KESIGLKINELLVVEYYSR 192


>gi|42794638|gb|AAS45717.1| Rps4 [Ceratostema lanigerum]
          Length = 211

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 21/217 (9%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S +  +L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHXRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     +   +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIXGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---------AERDVPEYIS 169
           RHVLVNGR ++I SYRCK  D+I  ++  K  A +  + Q            + VP +++
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE--KSRALIQNSFQNLFDLPSHKRKRKRVPYHLT 173

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +N         +I ++       + ++  LVVE+YSR
Sbjct: 174 LNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|63191722|gb|AAY34821.1| small ribosomal protein subunit 4 [Anacolia webbii]
          Length = 191

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|80974158|gb|ABB53772.1| small ribosomal subunit protein 4 [Garovaglia zantenii]
          Length = 198

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGTLPRLTNKVPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLPNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              VNI SYRCK  D I VK +      + +     ++  +P +++           +I 
Sbjct: 117 DCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LDRESIGLKINELLVVEYYSR 196


>gi|67035716|gb|AAY62789.1| small ribosomal protein subunit 4 [Arthrocormus schimperi]
          Length = 199

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+     S    ++      K S + ++L  KQK++ +YG 
Sbjct: 2   RGPRVKILRRLGTLSGLTNKTSQLKSSS---INQSISNKKVSQYRIRLEEKQKLRFHYG- 57

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN
Sbjct: 58  LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVN 117

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R VNI SY+CK  D I +K + K    +++ +    +   P ++  N         +I 
Sbjct: 118 NRIVNIPSYQCKPQDFITIKDQQKYQKMIIKNTSFFPKYKTPNHLIFNSVEKKGLVNQI- 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 177 --LDQESIGLKINELLVVEYYSR 197


>gi|13358061|ref|NP_078335.1| 30S ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762225|ref|YP_001752581.1| 30S ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920263|ref|ZP_02690589.2| ribosomal protein S4 [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|183508584|ref|ZP_02689436.2| ribosomal protein S4 [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186701633|ref|ZP_02553689.2| ribosomal protein S4 [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|26399528|sp|Q9PPZ2|RS4_UREPA RecName: Full=30S ribosomal protein S4
 gi|189045404|sp|B1AJD7|RS4_UREP2 RecName: Full=30S ribosomal protein S4
 gi|11276522|pir||A82883 ribosomal protein S4 UU498 [imported] - Ureaplasma urealyticum
 gi|6899497|gb|AAF30910.1|AE002148_2 ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|168827802|gb|ACA33064.1| ribosomal protein S4 [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171902667|gb|EDT48956.1| ribosomal protein S4 [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|182676037|gb|EDT87942.1| ribosomal protein S4 [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186700867|gb|EDU19149.1| ribosomal protein S4 [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 202

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 114/209 (54%), Gaps = 12/209 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+   S +K  RR+G +L    K       R+YGPG HG  +K K S +G QL  KQK+
Sbjct: 1   MSRYTGSIYKKSRRLGFSLLENNKEFNSGKKRTYGPGQHGN-KKVKLSNYGQQLVEKQKL 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
              YG +++++FR +++ A    G  + NL+  LESRLD++VYRA F PT  AARQ VNH
Sbjct: 60  MFLYG-LNDRQFRRLYRVALGRPGVLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV-NHDNMVA 177
            HVLVN + VNI S   + G  I +K KS ++  +            ++I + + +  VA
Sbjct: 119 SHVLVNNKKVNIPSALVEVGSTIALKAKSLEIPLIKNTLNKPA----DFIELIDKEKKVA 174

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R+P   +    P  +    VVE+Y+R
Sbjct: 175 KLARLPERNE---LPADVNEAYVVEWYNR 200


>gi|67035867|gb|AAY62860.1| small ribosomal protein subunit 4 [Radulina borbonica]
          Length = 191

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K K K    + +  +  E+  +P +++ N         +I        
Sbjct: 117 SYRCKPHDFITIKNKQKSETIINKNIEFYEKSKIPNHLTYNSLEKKGLINQILDRD---S 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|50235326|gb|AAT70696.1| Rps4 [Eurhynchium striatulum]
 gi|50235336|gb|AAT70701.1| Rps4 [Rhynchostegium serrulatum]
          Length = 195

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42794701|gb|AAS45746.1| Rps4 [Sphyrospermum ellipticum]
          Length = 211

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I +R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIXFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIIXAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|33413191|emb|CAD86731.1| ribosomal protein small subunit 4 [Dicranum acutifolium]
          Length = 190

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I ++ + K  A +++    +++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|21914140|gb|AAM81292.1| ribosomal protein subunit 4 [Acidodontium heteroneuron]
          Length = 197

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 4   VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 59

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 60  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 119

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L 
Sbjct: 120 NIPSYRCKPEDSITIKNRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 176

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 177 RESIGLKINELLVVEYYSR 195


>gi|315504644|ref|YP_004083531.1| ribosomal protein s4 [Micromonospora sp. L5]
 gi|315411263|gb|ADU09380.1| ribosomal protein S4 [Micromonospora sp. L5]
          Length = 202

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 7/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K ++ R +G  L  +       R Y PG+HG+ R++   Y  ++L  KQ+++  Y ++S
Sbjct: 6   PKARLSRALGIPLTRKCVRYFERRPYPPGVHGRSRRTTSDYQ-VRLLEKQRLRHQY-NVS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R +F EA R  G T   L++ LE RLD +V RA    +I+ ARQ V H H+ V+GR
Sbjct: 64  EAQLRRLFDEAARGAGKTGETLVALLERRLDAVVLRAGLARSIYQARQLVAHGHITVDGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP--EYISVNHDNMVATFVRIPS 184
            V+  S+R + G V+ V+++S+ L     A+  A  D     Y+S     + AT VR P+
Sbjct: 124 KVDRPSHRLRPGQVVGVRERSRALPPFQLAAAGAHADAQPRPYLSAQPAELRATLVREPA 183

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV+    LVVEFYSR
Sbjct: 184 RHE---VPVVCDEQLVVEFYSR 202


>gi|63078626|gb|AAY29399.1| ribosomal protein S4 [Tortella humilis]
 gi|63191875|gb|AAY34897.1| small ribosomal protein subunit 4 [Tortella humilis]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQIMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|157786004|gb|ABV74174.1| small ribosomal protein 4 [Lopidium struthiopteris]
          Length = 198

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 7/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       KS    +     ++      K S + ++L  KQK++ +YG I+
Sbjct: 2   PRVRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-IT 58

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG 
Sbjct: 59  ERQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGY 118

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +K K K  + + +  +L ++  +  +++ +         +I   
Sbjct: 119 IVDIPSYRCKPQDFITIKNKQKYESIISKNIELYQKSKIANHLTYSSLEKKGLVNQI--- 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 176 LDRESIGLKINELLVVEYYSR 196


>gi|33413175|emb|CAD86723.1| ribosomal protein small subunit 4 [Ptychomitrium crassinervium]
          Length = 192

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R VNI
Sbjct: 57  LNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    V++    +++  VP +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITLKARQKFQDMVIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHG 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|37992541|gb|AAR06449.1| small ribosomal protein 4 [Hemiragis aurea]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---IAQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQLKSEAIISKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035992|gb|AAY62922.1| small ribosomal protein subunit 4 [Duthiella wallichii]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLPNYVRIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|11228619|gb|AAG33095.1| small ribosomal protein 4 [Campylopus areodictyon]
          Length = 191

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     +    +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  + +    + +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFIXIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLNINELLVVEYYSR 189


>gi|37992675|gb|AAR06516.1| small ribosomal protein 4 [Scleropodium obtusifolium]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|29422385|gb|AAO84588.1| small ribosomal protein 4 [Aulacomnium palustre]
          Length = 190

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    +       K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTTKTPQLKSSS---IDQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +   L ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQKSEAIINKNIDLYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|67036006|gb|AAY62929.1| small ribosomal protein subunit 4 [Habrodon perpusillus]
          Length = 195

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++           +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYISLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLXINELLVVEYYSR 193


>gi|67036048|gb|AAY62950.1| small ribosomal protein subunit 4 [Eurhynchium hians]
          Length = 194

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVTQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|29422375|gb|AAO84583.1| small ribosomal protein 4 [Quathlamba debilicostata]
          Length = 197

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K P         ++      K S + ++L  KQK++ +YG +
Sbjct: 1   GXRVRIIRRLGXLPGLTNKIPQLK---SLSINQSTSNKKISQYRIRLEEKQKLRFHYG-M 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SYRCK  D I +K + +    + +     ++  +P ++S N         +I  
Sbjct: 117 CIVDIPSYRCKPHDFITIKDRQRSQTIISKNIDFYQKYKIPNHLSYNSLENKGLVNQI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|50235338|gb|AAT70702.1| Rps4 [Kindbergia praelonga]
          Length = 195

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|63101015|gb|AAY33132.1| small ribosomal protein 4 [Platygyriella aurea]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLK---FSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|42794675|gb|AAS45734.1| Rps4 [Satyria allenii]
          Length = 211

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S       +  K     + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRRT--QSRFVKXXXXXYHIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L   LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLFQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|21914170|gb|AAM81307.1| ribosomal protein subunit 4 [Ptychostomum pallens]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|288574373|ref|ZP_06392730.1| ribosomal protein S4 [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570114|gb|EFC91671.1| ribosomal protein S4 [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 205

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 7/205 (3%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           ++ + K K+ RR G N++G  K               RR +K S +G QL  KQK++  Y
Sbjct: 7   RKTAPKGKMVRRFGVNVFGNTKYDRLLAKKSGANKKNRRPAKQSIYGQQLLEKQKIRFAY 66

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G +SEK+ R+ + +A    G   HN++  LESRLD +VYR     T   ARQ V H H  
Sbjct: 67  G-VSEKQLRAAYAKAKNQGGVAGHNMLILLESRLDNVVYRLGLCSTRPQARQLVRHGHFT 125

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
           +N R V+I S   K GDVI V +KS+++  + E S++A     P ++S+N   M     R
Sbjct: 126 LNDRKVDIPSALVKPGDVIAVAEKSREMKVLRENSEVASAVSKPGWLSLN--GMSGKVER 183

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P   +    P I    +VVE+YSR
Sbjct: 184 LPERQE---IPTIADEQIVVEYYSR 205


>gi|63191863|gb|AAY34891.1| small ribosomal protein subunit 4 [Pleurochaete squarrosa]
          Length = 192

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|37992441|gb|AAR06399.1| small ribosomal protein 4 [Callicostella pallida]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I     
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIGLKINELLVVEYYSR 192


>gi|11228664|gb|AAG33117.1| small ribosomal protein 4 [Ptychomitrium gardneri]
          Length = 191

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A V++    ++   VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKARQKSQAMVIKNVDFSQNYKVPNHLTFNSLEKKGLVNQI---LDHGS 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|325108696|ref|YP_004269764.1| 30S ribosomal protein S4P [Planctomyces brasiliensis DSM 5305]
 gi|324968964|gb|ADY59742.1| SSU ribosomal protein S4P [Planctomyces brasiliensis DSM 5305]
          Length = 202

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +    K +I+RR+G  ++           R   PG+H +R+K     +G  L  KQK+
Sbjct: 1   MGRYTGPKARINRRLGSPVFESAGALRASEKRDSPPGMHQRRKKPTI--YGAALTEKQKI 58

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K YYG   E++ R  F EA R +G+T  NL+   E RLD +V RA F  T   ARQ + H
Sbjct: 59  KYYYGF-RERQLRKYFNEARRLKGNTGQNLLVLCERRLDNVVRRAGFAQTRPQARQAIVH 117

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  +NGR+VN  S + + GDVI V+ +    A   E    A+    E++SV+   +   
Sbjct: 118 SHFQLNGRTVNKPSIQVRAGDVITVRNRPNLHAIYKEQVGRADTAACEFVSVDDSALKIV 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              IP+   DV  PV +    VV F SR
Sbjct: 178 VSAIPT-FADVSLPVDVN--QVVAFLSR 202


>gi|22854713|gb|AAN09776.1| small ribosomal protein 4 [Holomitrium cylindraceum]
          Length = 191

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAMIIKNIYFSQKSKIPNHLTFSSLEKRGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67036056|gb|AAY62954.1| small ribosomal protein subunit 4 [Dichelyma falcatum]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQTTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++           +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIISKNIEFYKKYKIPNHLTYISLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63101055|gb|AAY33152.1| small ribosomal protein 4 [Pterobryopsis stolonacea]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K K K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNKRKSETIISKNIEFDQKYKIPNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|22854729|gb|AAN09784.1| small ribosomal protein 4 [Orthodicranum flagellare]
          Length = 189

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A +++    +++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|67035748|gb|AAY62805.1| small ribosomal protein subunit 4 [Pentastichella pentasticha]
          Length = 193

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KIIRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+
Sbjct: 57  LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNRQKSQDIITKNIDFYQKYKIPNHLTYNSLEKNGFVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ELIGLKINELLVVEYYSR 191


>gi|37992483|gb|AAR06420.1| small ribosomal protein 4 [Cyclodictyon roridum]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I     
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIDLKINELLVVEYYSR 192


>gi|74273237|gb|ABA01318.1| ribosomal protein S4 [Deidamia sp. LBF-2005]
          Length = 186

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP N  ++      Q R  K S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLPSKSPKNRSAFQ----NQSRSGKKSQYSIRLQEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVNGR V+I +YRC
Sbjct: 56  IAAKAKGPTGQVLLQLLEMRLDNMLFRLGMASTIPQARQLVNHRHILVNGRIVDIPNYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I          + 
Sbjct: 116 KPRDLITVKDEQKLKDLIRNSLASFPQDKLPKHLTLDPLQYKGLVNQIIDRK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|149178472|ref|ZP_01857061.1| 30S ribosomal protein S4 [Planctomyces maris DSM 8797]
 gi|148842685|gb|EDL57059.1| 30S ribosomal protein S4 [Planctomyces maris DSM 8797]
          Length = 201

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 9/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +    K +++RR+G  ++        ++ R+  PG+  +RRK   S FGL L  KQK+
Sbjct: 1   MGRYTGPKGRVNRRLGALVFEDAGATRALDQRNLPPGMSQRRRK--SSNFGLALIEKQKI 58

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K YYG + E++ R  F +A R +G+T   L+   E RLD ++ RA F  T   ARQ + H
Sbjct: 59  KFYYG-LRERQLRRYFDKARRIKGNTGEALLILCERRLDNVICRAGFAQTRPQARQGIVH 117

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  +NGR+VN  S   K GDVI V+ +        E  +   R    ++++    + AT
Sbjct: 118 SHFQLNGRTVNKPSIWVKPGDVITVRNRPNLKKLYAELIESG-RPGCAWLTLEKKELSAT 176

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V  P+ ++DV  PV +    VV   SR
Sbjct: 177 VVTAPT-MEDVSLPVDV--GQVVALISR 201


>gi|39546759|gb|AAR28106.1| small ribosomal protein 4 [Pellia epiphylla]
 gi|46811036|gb|AAT01836.1| small ribosomal protein 4 [Pellia epiphylla]
          Length = 195

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 8/201 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K  +   S   G     +K   S + ++L  KQK++ +YG +
Sbjct: 1   GPRTKIIRRLGTLPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILIND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
            +V+I SY C+  DVI V  + K+   +       +  VP +++ +      +  +    
Sbjct: 117 DTVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 ---ECIDLKINELLVVEYYSR 193


>gi|67035994|gb|AAY62923.1| small ribosomal protein subunit 4 [Chrysocladium flammeum]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   +
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMI 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|42794691|gb|AAS45742.1| Rps4 [Satyria sp. EAP-2003]
          Length = 211

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K   S + ++L+ KQK + 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPKXXNSRRTQSRFXKKK--KSQYHIRLQEKQKXRX 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+ L          L + Q   + VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRQRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|47606934|gb|AAT36387.1| ribosomal protein subunit 4 [Pyrrhobryum novae-caledoniae]
          Length = 195

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P  T S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLTSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 IDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESISLKINELLVVEYYSR 193


>gi|37992433|gb|AAR06395.1| small ribosomal protein 4 [Brymela websteri]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G  L G     +  +S            K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGV-LPGLTNKILELKSSSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A V +  +  ++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNQQKSEAIVNKNIEFYQKTKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|7576759|gb|AAF63976.1| small ribosomal protein 4 [Dendroligotrichum dendroides]
          Length = 190

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTIKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A +      +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|46486538|gb|AAS98705.1| ribosomal protein subunit 4 [Mesochaete taxiforme]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN + V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDQIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K  A + +     ++  +P ++  +         +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKDRQKSQAIISKNIYFYQKYKIPNHLIYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|3098256|gb|AAC15576.1| small ribosomal protein 4 [Syntrichia ruralis]
          Length = 196

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 2   RVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 58  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L
Sbjct: 118 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---L 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 175 DQESIGLKINELLVVEYYSR 194


>gi|67035929|gb|AAY62891.1| small ribosomal protein subunit 4 [Entodon hampeanus]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|20531101|gb|AAM27371.1| ribosomal protein 4 [Dicnemon seriatum]
          Length = 191

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A  ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +++    +++  VP +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|28194675|gb|AAO33599.1|AF480954_1 ribosomal protein S4 [Desmatodon latifolius]
          Length = 196

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   
Sbjct: 117 IVNIPSYRCKPQDFITINNRKKSQVMINKNIDFYQKSKIPNHLTFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQELIGLKINELLVVEYYSR 194


>gi|42556404|gb|AAS19797.1| small ribosomal protein 4 [Cephalozia bicuspidata]
          Length = 191

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G +     K+  +  +Y   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRPGISPGLTSKTLKSKSNY---IDRSTSNKKVSQYRVRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+ +N   ++I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISMNNNIIDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K +  + + +   L ++  +P ++S +   +  +  ++ +      
Sbjct: 117 SYNCQPGDIITIRNKPESRSMISKNINLFQKLKMPSHLSFDLTELQGSVNQMVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|37992623|gb|AAR06490.1| small ribosomal protein 4 [Papillaria imponderosa]
          Length = 192

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|37992703|gb|AAR06530.1| small ribosomal protein 4 [Thamniopsis pendula]
          Length = 194

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|160894729|ref|ZP_02075504.1| hypothetical protein CLOL250_02280 [Clostridium sp. L2-50]
 gi|156863663|gb|EDO57094.1| hypothetical protein CLOL250_02280 [Clostridium sp. L2-50]
          Length = 197

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R +G           + R         R   K S +GLQLR KQK K 
Sbjct: 1   MAVDRTPVLKRCRSLGMEPMYLGIDKKSNRKST------RANRKVSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+++ +A++ +G T  NL++ LE RLD +++R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNLYAKAEQQKGLTGPNLMTLLELRLDNVIFRLGFARTRREARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNG+SVNI SY+ K GD IE+++KSK L    +     E   VP +++ + +N+    
Sbjct: 114 VLVNGKSVNIPSYQVKAGDKIEIREKSKSLQRYKDIIAATEGHLVPGWLTADRENLCGEV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V  P+  +     V +   L+VE YS+
Sbjct: 174 VEKPNREQ---IDVPVNETLIVELYSK 197


>gi|37992487|gb|AAR06422.1| small ribosomal protein 4 [Daltonia longifolia]
          Length = 194

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKVIRRLGVLPGLTNKVLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  + +++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEVLINKNIEFSQKSKIPNHLTYNSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CESIGLKINELLVVEYYSR 192


>gi|33413187|emb|CAD86730.1| ribosomal protein small subunit 4 [Dicranella palustris]
          Length = 187

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTSKTPKLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A +++    +++  VP +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQKSQAMIIKNVDFSQKYKVPNHLTFNSLEKKGLVNQI---LDQESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|7576571|gb|AAF63898.1| ribosomal protein system 4 [Hypnum lindbergii]
          Length = 190

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQQKSKTIITKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|3098260|gb|AAC15578.1| small ribosomal protein 4 [Plagiopus oederi]
          Length = 197

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I  R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 3   RVRIISRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 58

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 59  RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRM 118

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L
Sbjct: 119 VDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---L 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 DRESIGLKINELLVVEYYSR 195


>gi|146261585|gb|ABQ15102.1| ribosomal protein S4 [Ribes americanum]
          Length = 187

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGXLPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYR
Sbjct: 56  RIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  K   K  A +      +   ++P+Y++++         +I  +       +
Sbjct: 116 CKPRDIITAKDDQKSRALIQNYLDSSPHEELPKYLTLHPLQYKGLVNQIIDT---EWVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|37992573|gb|AAR06465.1| small ribosomal protein 4 [Lepidopilum polytrichoides]
          Length = 194

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P Y++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEAIINKNIEFYQKMKIPNYLTYNFVEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|32892116|gb|AAP88997.1| ribosomal protein S4 [Mitostemma brevifilis]
 gi|74273239|gb|ABA01319.1| ribosomal protein S4 [Dilkea johannesii]
          Length = 186

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+     G     Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPI----AGSAFQNQSRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 116 KPRDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|67035984|gb|AAY62918.1| small ribosomal protein subunit 4 [Ptilium crista-castrensis]
          Length = 194

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L   LE RLD +++R    PTI  ARQ VNH H+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|302669990|ref|YP_003829950.1| ribosomal protein S4 RpsD [Butyrivibrio proteoclasticus B316]
 gi|302394463|gb|ADL33368.1| ribosomal protein S4 RpsD [Butyrivibrio proteoclasticus B316]
          Length = 208

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 110/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +  +         + R+        R   K S +GLQLR KQK K 
Sbjct: 12  MAVNRVPVLKRCRSLDLDPTFLGYDKKSKRTSA------RAGKKMSEYGLQLREKQKAKF 65

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +  ADR +G T  NL++ LESRLD +V+R  F  T   ARQ V H+ 
Sbjct: 66  IYGVL-EKPFRNYYDRADRMKGQTGANLMTILESRLDNVVFRMGFARTRREARQVVLHKF 124

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           VLVNG+ +N+ SY  K GD IE+K+ +K +    + +++ A R VPE+I VN DN+  T 
Sbjct: 125 VLVNGKQINVPSYLVKAGDTIEIKEAAKNIQRFKDITEITAGRLVPEWIDVNKDNLQGTV 184

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +PS        V +   L+VE YS+
Sbjct: 185 KELPSR---EVIDVPVDEMLIVELYSK 208


>gi|78102697|gb|ABB21562.1| small ribosomal protein 4 [Plagiochila rutilans var. moritziana]
          Length = 189

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLNINELLVVE 189


>gi|78102699|gb|ABB21563.1| small ribosomal protein 4 [Plagiochila nobilis]
          Length = 189

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINDDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ G++I ++ + K  +++ +     ++  VP +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGEIITIRNRQKSQSAITKNINSFQKLKVPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + ++  LVVE
Sbjct: 176 --EWINLKIKELLVVE 189


>gi|21914162|gb|AAM81303.1| ribosomal protein subunit 4 [Plagiobryum cyclophyllum]
          Length = 195

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKIPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|63191793|gb|AAY34856.1| small ribosomal protein subunit 4 [Takakia ceratophylla]
          Length = 188

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P +   Y   ++      K S + ++L  KQK++ ++G I+E++     
Sbjct: 1   LGALPGLTNKTPQSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHHG-ITERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN R+VNI S+R
Sbjct: 57  RIARRAKGSTGQVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRTVNIPSFR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +    +++  +P ++++N         +I          +
Sbjct: 117 CKPQDFITIKDRQKSQAIITKNMDCSQKSKIPNHLTLNSSQKRGLVNQIIDR---ESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|67035980|gb|AAY62916.1| small ribosomal protein subunit 4 [Hylocomium splendens]
          Length = 194

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035957|gb|AAY62905.1| small ribosomal protein subunit 4 [Circulifolium microdendron]
          Length = 192

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|37992719|gb|AAR06538.1| small ribosomal protein 4 [Weymouthia mollis]
          Length = 190

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|37992445|gb|AAR06401.1| small ribosomal protein 4 [Calyptrochaeta japonica]
          Length = 194

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I  K + +    + +  +  +   +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITTKDQRESEDIINKNIEFYQNYKIPNHLNYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|240145850|ref|ZP_04744451.1| ribosomal protein S4 [Roseburia intestinalis L1-82]
 gi|257201998|gb|EEV00283.1| ribosomal protein S4 [Roseburia intestinalis L1-82]
 gi|291535455|emb|CBL08567.1| SSU ribosomal protein S4P [Roseburia intestinalis M50/1]
 gi|291537904|emb|CBL11015.1| SSU ribosomal protein S4P [Roseburia intestinalis XB6B4]
          Length = 197

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +    K  R +G           + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNKVPVLKRCRSLGLEPSYLGYDKKSNREL------KRANKKVSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK F + +++AD+ +G T  NL++ LESRLD +V+R  F  T   ARQ V+H+ 
Sbjct: 55  IYGVL-EKPFHNYYEKADQMKGMTGTNLMTMLESRLDNVVFRMGFARTRKEARQIVDHKF 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           +LVNG+ VNI SY  K GDVIE+K+K+K L  + +  +    R VPE++ V+ + +  T 
Sbjct: 114 ILVNGKQVNIPSYLVKAGDVIEIKEKNKGLQRMKDIVEVTGGRLVPEWLDVDAEKLQGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +PS  +     V +   L+VE YS+
Sbjct: 174 KELPSREQ---IDVPVDEMLIVELYSK 197


>gi|222084196|ref|YP_002519790.1| ribosomal protein S4 [Gnetum parvifolium]
 gi|172048621|sp|A6BM54|RR4_GNEPA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|149941464|dbj|BAF64899.1| ribosomal protein S4 [Gnetum parvifolium]
 gi|220983533|dbj|BAH11301.1| ribosomal protein S4 [Gnetum parvifolium]
          Length = 204

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 10/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P   +         R   K S     L+ KQK++ 
Sbjct: 1   MSRYLGPRFKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           ++G ++E++ R   +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH
Sbjct: 58  HFG-LTERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVA 177
           +LVN   VNI SY+CK  DVI +K K       +     ++  E  +P +++++      
Sbjct: 117 ILVNDHVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKG 176

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I          + ++  LV+E+YSR
Sbjct: 177 IVNKIIDRKD---IQLNIKEMLVIEYYSR 202


>gi|32892122|gb|AAP89000.1| ribosomal protein S4 [Passiflora lancetillensis]
          Length = 183

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P+   ++        R  K S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRPIVGSAF-------SRSGKKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     R+ +P++++++         +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPREKLPKHLTLDPFQYKGLVNQIIDSK---WVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|48527363|gb|AAT45814.1| small ribosomal protein 4 [Plagiochila chonotica]
          Length = 179

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 5/183 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRI 182
            ++
Sbjct: 177 NQM 179


>gi|328488154|gb|AEB19890.1| small ribosomal protein 4 [Pachyschistochila berggrenii]
          Length = 191

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLSSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K   K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNNKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|22854693|gb|AAN09766.1| small ribosomal protein 4 [Dicnemon semicryptum]
          Length = 191

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A  ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +  A +++    +++  VP +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQESQAMIIKNLDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|74273227|gb|ABA01313.1| ribosomal protein S4 [Adenia isaloensis]
          Length = 185

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 10/192 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP N  ++       + + K S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKNRSAFQ-----NQSRCKKSQYSIRLQEKQKLRFHYG-LTERQLLKYVR 54

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVNGR V+I +YRC
Sbjct: 55  IAAKAKGPTGQVLLQLLEMRLDNMLFRLGMASTIPQARQLVNHRHILVNGRIVDIPNYRC 114

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I          + 
Sbjct: 115 KPRDLITVKDEQKSKDLIRNSLASFPQEKLPKHLTLDPLQYKGLVNQIIDRK---WVGLK 171

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 172 INELLVVEYYSR 183


>gi|238064635|ref|ZP_04609344.1| RNA-binding S4 domain-containing protein [Micromonospora sp. ATCC
           39149]
 gi|237886446|gb|EEP75274.1| RNA-binding S4 domain-containing protein [Micromonospora sp. ATCC
           39149]
          Length = 202

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 9/203 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K K  RR+G  L  +    +  R + PG HG+ R     Y  ++L  KQ++K  Y  + 
Sbjct: 6   PKAKRSRRLGIALTPKCVRYLERRPFPPGDHGRARTKDSDY-KVRLLEKQRLKAQYD-LR 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R  F  A R  G T   L+  LE+RLD +V RA F  TI+ ARQ V HRH+ VNGR
Sbjct: 64  EGQLRRAFDRAVRRPGKTGEELVVDLETRLDALVLRAGFARTIYQARQLVTHRHLTVNGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIP 183
            V+  S R + GD I V ++S+  A  L A+  A   +R  P Y+ V+   +VA   R P
Sbjct: 124 RVDRPSARLRPGDEIAVAERSRGRAPFLLAAGGAHAPQRPAP-YLDVDLAGLVARLTRPP 182

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             ++    PVI    LVVE YSR
Sbjct: 183 RRVE---VPVICDEQLVVEHYSR 202


>gi|121761853|gb|ABM65012.1| ribosomal protein S4 [Plagiomnium maximoviczii]
          Length = 192

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE+R D I++R    PTI  ARQ VNHRH+LVN R V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I       
Sbjct: 117 PSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD--- 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 FIDLKINELLVVEYYSR 190


>gi|37992645|gb|AAR06501.1| small ribosomal protein 4 [Pilotrichum andersonii]
          Length = 194

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    +    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTILGARQLVNHKHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSQAIISKNIEFYQKFKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|28194671|gb|AAO33597.1|AF480952_1 ribosomal protein S4 [Barbula unguiculata]
          Length = 196

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGTLPGLTNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D+I +  + K    + +     ++  +P ++  N         +I   
Sbjct: 117 IVDIPSYRCKPQDLITINDRQKSQVMITKNVDFFQKSKIPNHLIFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|328541144|gb|AEB21796.1| ribosomal protein S4 [Sprucella succida]
          Length = 200

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K+ RR+G +     K+     SY           K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKVIRRLGASPGLTSKTLKPKSSY---NDRSTSNKKVSQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +
Sbjct: 58  -LTERQLLKYVRIARKAKGSTGQILLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISI 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   ++I SY C+ GD+I ++ K K  + + +   L +   +P +++ +   +  +  + 
Sbjct: 117 NNNIIDIPSYNCEPGDIITIRNKQKSRSIITKNVNLFQNLKMPNHLTFDSTKLCGSINQT 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 177 INR---EWINLKINELLVVEYYSR 197


>gi|302868886|ref|YP_003837523.1| 30S ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
 gi|302571745|gb|ADL47947.1| ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
          Length = 202

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 7/202 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K ++ R +G  L  +       R Y PG+HG+ R++   Y  ++L  KQ+++  Y ++S
Sbjct: 6   PKARLSRALGIPLTRKCVRYFERRPYPPGVHGRSRRTTSDYQ-VRLLEKQRLRHQY-NVS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R +F EA R  G T   L++ LE RLD +V RA    +++ ARQ V H H+ V+GR
Sbjct: 64  EAQLRRLFDEAARGAGKTGETLVALLERRLDAVVLRAGLARSVYQARQLVAHGHITVDGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP--EYISVNHDNMVATFVRIPS 184
            V+  SYR + G V+ V+++S+ L     A+  A  D     Y+S     + AT VR P+
Sbjct: 124 KVDRPSYRLRPGQVVGVRERSRALPPFQLAAAGAHADAQPRPYLSAQPAELRATLVREPA 183

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             +    PV+    LVVEFYSR
Sbjct: 184 RHE---VPVVCDEQLVVEFYSR 202


>gi|37548885|gb|AAO32711.1| ribosomal protein 4 [Polytrichum piliferum]
          Length = 192

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG  +E++ 
Sbjct: 1   IIRRLGXLPGLTNKTPQTKSXY---INQAVSNKKMSQYRIRLEEKQKLRFHYGX-TERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H+LVN R +NI
Sbjct: 57  LNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHXHILVNDRIINI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +  A +      ++   +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQESQAIIARNIDXSQXXKIPNHLTFNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|297588221|ref|ZP_06946865.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516]
 gi|297574910|gb|EFH93630.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516]
          Length = 198

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 12/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + K  RR+G N+ G PK+         G    R   K + +G+QL  KQ+++ 
Sbjct: 1   MARMMGPRFKQSRRLGLNVCGHPKANKRM-----GKGLGRNDKKLTEYGMQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRG--DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           YYG ++EK+    F++A  ++    T   ++  LE+RLD +V RA F  +I  ARQ V+H
Sbjct: 56  YYG-VNEKQMHKYFEKALNNKEGLTTGDVMVRQLETRLDNLVLRASFASSIRQARQMVSH 114

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
             + VNG+ V+I SY+  EG VIE+K+KS+      E  +        YI    +N   T
Sbjct: 115 GLIRVNGKKVDIPSYQVAEGSVIELKEKSRSNELFKENYETNFAQSLPYID-KEENFKVT 173

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R+P   +    P+ +  +L+VE YSR
Sbjct: 174 LTRLPERQE---IPIEITDSLIVELYSR 198


>gi|42794641|gb|AAS45718.1| Rps4 [Ceratostema reginaldii]
          Length = 211

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++ + KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRPQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     +   +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIXGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|63191783|gb|AAY34851.1| small ribosomal protein subunit 4 [Atrichum undulatum]
          Length = 190

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A +      +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQEFQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLEINELLVVEYYSR 188


>gi|17025843|gb|AAL32087.1| ribosomal protein 4 [Mitthyridium sp. Wall 3673]
          Length = 195

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++E+
Sbjct: 2   VKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 58  QLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNMV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L 
Sbjct: 118 NIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNFVEKKGLVNQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 QESIGLKINELLVVEYYSR 193


>gi|14276328|gb|AAK58202.1| small ribosomal protein 4 [Schistostega pennata]
          Length = 190

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKIPQLRSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++    + +  VP +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQKSHAMIMKNVDFSRKAKVPNHLTFNSLEKNGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|197131478|gb|ACH47257.1| ribosomal protein S4 [Erodium chrysanthum]
          Length = 198

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  +R+  NL G        R   P      +K +   +  +L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKVQRLETNLPGFT----TKRPIIP-----LKKKRERIYITRLKEKQKLRL 51

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 52  HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 110

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDNMVA 177
           +LVNGR V+I SYRCK  D++  ++K+K    +     +S  + + +P +++ +      
Sbjct: 111 ILVNGRIVDIPSYRCKPRDILTGREKAKSRNLMQNYLDSSSSSHKRLPNHLTTHPLQYKG 170

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I          + +   LVVE+YSR
Sbjct: 171 LVHQIIDRR---CVGLKINEFLVVEYYSR 196


>gi|297198341|ref|ZP_06915738.1| ribosomal protein S4 [Streptomyces sviceus ATCC 29083]
 gi|197714395|gb|EDY58429.1| ribosomal protein S4 [Streptomyces sviceus ATCC 29083]
          Length = 204

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQPRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A +++G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-VSERQLVRAYERAAKTQGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG+ V+  S+R +  DV+ V+++S++      A +     E + P Y+ VN   +  
Sbjct: 119 IEVNGQKVDKPSFRVRPDDVVMVRERSREKTLFSIAREGGFAPEGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204


>gi|67035600|gb|AAY62731.1| small ribosomal protein subunit 4 [Micromitrium austinii]
          Length = 188

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  + V++    +++  VP +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992489|gb|AAR06423.1| small ribosomal protein 4 [Dendrocyathophorum decolyi]
          Length = 194

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NH+H+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHKHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +L ++  +P ++  N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIINKNIELYQKYKIPNHLIYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|18920767|gb|AAL82428.1| ribosomal protein system 4 [Plagiothecium curvifolium]
          Length = 194

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   CEIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|157887698|emb|CAM33371.1| ribosomal protein S4 [Triquetrella papillata]
          Length = 196

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K P  T S        R+    S + ++L  KQK++ +YG I+
Sbjct: 1   PRVKIIRRLGTLPGLSNKIPHLTSSSTNQSTSNRK---ISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LDQESIGLKINELLVVEYYSR 194


>gi|37992731|gb|AAR06544.1| small ribosomal protein 4 [Zelometeorium patulum]
          Length = 195

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D + +K + K    + +  +  ++  +P +++           +I   L
Sbjct: 117 VDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|293633969|gb|ADE60364.1| ribosomal protein subunit 4 [Atrichum androgynum]
          Length = 190

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +  A +      ++   +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQEFQAIITRNIDFSQTYKIPNHLTFNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLEINELLVVEYYSR 188


>gi|37992613|gb|AAR06485.1| small ribosomal protein 4 [Orthostichidium involutifolium]
          Length = 192

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNSCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|11228629|gb|AAG33100.1| small ribosomal protein 4 [Dicranodontium denudatum]
          Length = 191

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     +    +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    V +  + +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI---LNKES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|323483273|ref|ZP_08088663.1| hypothetical protein HMPREF9474_00412 [Clostridium symbiosum
           WAL-14163]
 gi|323691228|ref|ZP_08105504.1| ribosomal protein S4 [Clostridium symbiosum WAL-14673]
 gi|323403371|gb|EGA95679.1| hypothetical protein HMPREF9474_00412 [Clostridium symbiosum
           WAL-14163]
 gi|323504747|gb|EGB20533.1| ribosomal protein S4 [Clostridium symbiosum WAL-14673]
          Length = 197

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +  +         + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVDRVPVLKRCRSLDLDPIYLGIDKKSKREL------KRANRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A +  G    NL+  LE RLD +++R  F  T    RQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKASKMSGQVGTNLMILLECRLDNVLFRMGFGRTRKETRQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SYR K GD IE+K+K K         +  A R VP ++  + +N+    
Sbjct: 114 VLVNGKPVNIPSYRVKAGDTIEIKEKYKSSQRYKNILEVTAGRMVPAWLEADMENLKGVV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KELPTRDE---IDVPVNEVLIVELYSK 197


>gi|29422407|gb|AAO84599.1| small ribosomal protein 4 [Philonotis falcata]
          Length = 195

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGAXXGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKXKGSTGEVLLQLLEMRLDNVIFRLGMAXTIPGARQLVNHRHILVNDRX 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|21914166|gb|AAM81305.1| ribosomal protein subunit 4 [Plagiobryum meesioides]
          Length = 194

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+     +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTAQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K  A + +   L ++   P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|46486546|gb|AAS98709.1| ribosomal protein subunit 4 [Mniodendron comosum]
          Length = 195

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+     ++   ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALAGLTNKTAQLKSNF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ ++        +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|29833389|ref|NP_828023.1| 30S ribosomal protein S4 [Streptomyces avermitilis MA-4680]
 gi|41017832|sp|Q827S7|RS4_STRAW RecName: Full=30S ribosomal protein S4
 gi|29610512|dbj|BAC74558.1| putative ribosomal protein S4 [Streptomyces avermitilis MA-4680]
          Length = 204

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+ +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  +SE++    ++ A +++G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-VSERQLVRAYERAAKTQGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG+ V+  S+R K  DV+ V+++S+Q      A +     + + P Y+ VN   +  
Sbjct: 119 IEVNGQKVDKPSFRVKPDDVVMVRERSRQKPLFEVAREGGFAPDGETPRYLQVNLRALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDREPNRKE---IPVICDEQLVVEYYAR 204


>gi|67035871|gb|AAY62862.1| small ribosomal protein subunit 4 [Rhacopilopsis trinitensis]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPRLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|66866231|gb|AAY57785.1| small ribosomal protein 4 [Hymenodontopsis bifaria]
          Length = 204

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 13/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASV------LEASQLAERDVPEYISVNHDNMVA 177
           N R V+I SYRCK  D I +K + K  A +             +  +P +++ +      
Sbjct: 117 NDRIVDIPSYRCKPQDFITMKDRQKYQAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKKG 176

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I   L      + +   LVVE+YSR
Sbjct: 177 LVTQI---LDRESIGLKINELLVVEYYSR 202


>gi|323141381|ref|ZP_08076272.1| ribosomal protein S4 [Phascolarctobacterium sp. YIT 12067]
 gi|322414130|gb|EFY04958.1| ribosomal protein S4 [Phascolarctobacterium sp. YIT 12067]
          Length = 197

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   +   K  R +G        S  + R        +R+  K S +G+QL  KQK K 
Sbjct: 1   MAIDRTPVLKRCRSLGLAPAFMGISKESKRQV------RRQNRKKSEYGIQLTEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  + +A +  G T  NL+  LE R+D +V+R     T   ARQ V H H
Sbjct: 55  IYGVL-EKQFRGYYDKAKKMEGITGENLLILLERRIDNVVFRLGLANTRRQARQIVRHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           + VNG+ ++I S   + GDV+ V + S+         + LA + VP ++ ++  N+    
Sbjct: 114 IAVNGKRLDIPSALVRVGDVVTVMENSRAKEYFKGMDETLATKAVPAWLVLDAANVSGKV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P+  +     V ++ + +VE YS+
Sbjct: 174 DRFPTREE---IDVPIEEHFIVELYSK 197


>gi|7576581|gb|AAF63903.1| ribosomal protein system 4 [Haplocladium virginianum]
          Length = 189

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  + +++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFSQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|256370802|ref|YP_003108627.1| 30S ribosomal protein S4 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009594|gb|ACU52954.1| 30S ribosomal subunit protein S4 [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 223

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 25/225 (11%)

Query: 1   MSKRESSKHKIDRR--IGENLWGRPKSPVNTRSYGPGLHGQRRKSK-------------- 44
           M+K    K+KI R+  +GE+++ + K+    +    G +   R  K              
Sbjct: 1   MAKYIGPKNKIARKFELGESIYLKEKNNFENKKTFDGQYVNPRSGKNRKIIKKLNKKLNK 60

Query: 45  -----PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
                 S++ +QL  KQK+K  YG I EK+FR +F++A + +G     L+   ESRLD I
Sbjct: 61  KLNKKKSFYFIQLLEKQKVKYTYG-ILEKQFRKMFEKASKKKGRKGEILLQLCESRLDNI 119

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           VYR K   T   ARQ V+HRH+ VNG+ VNI SY  K GD I + +K K+  ++L   + 
Sbjct: 120 VYRLKLSHTRPEARQLVSHRHITVNGKIVNIPSYNLKPGDKISLIEKYKKQKAILLEKKR 179

Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
               V  ++S +++N +     IP   +    P ++  NL+VE Y
Sbjct: 180 LVGKVTTWLSWDNENFIGILKSIPRREQ---IPEMINENLIVELY 221


>gi|3098258|gb|AAC15577.1| small ribosomal protein 4 [Pyrrhobryum spiniforme]
 gi|46486584|gb|AAS98728.1| ribosomal protein subunit 4 [Pyrrhobryum spiniforme]
 gi|47606938|gb|AAT36389.1| ribosomal protein subunit 4 [Pyrrhobryum pungens]
          Length = 195

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P  T S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLTSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDREKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESISLKINELLVVEYYSR 193


>gi|49182712|gb|AAT57818.1| small ribosomal protein [Haplomitrium blumei]
          Length = 198

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGT-LPGLTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+++N ++
Sbjct: 57  RQLLRYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMINDKT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSK----QLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183
           V+   Y C+  D+I  K  +K        + +     +  +P ++ ++    V    +I 
Sbjct: 117 VDAPGYNCEPRDIITTKITTKNPMESRLGMAKGMDSIQYKIPNHLFLDSSKGVGLVNQII 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 177 DR---EWISLKINELLVVEYYSR 196


>gi|63191871|gb|AAY34895.1| small ribosomal protein subunit 4 [Gyroweisia tenuis]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P ++S N         +I   L 
Sbjct: 117 NIPSYRCKPQDFISIKNRQKSQVMITKNIDFSQKSKIPNHLSFNSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|328488178|gb|AEB19902.1| small ribosomal protein 4 [Schistochila pseudociliata]
          Length = 191

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKKKSQSIITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|37683548|gb|AAQ98825.1| small ribosomal protein 4 [Pogonatum macrophyllum]
          Length = 190

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +    + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQESQVIIAKIIDFSQKYKIPNHLTFNSFEKKGLVNKI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|37548853|gb|AAO32695.1| ribosomal protein 4 [Pogonatum campylocarpon]
          Length = 190

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGVLPGLSGKTLRQKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C+ GD I V+ + K  + + +   L     +P +++ +   +     +  +       
Sbjct: 117 YSCEPGDNITVRNRQKSQSIITKNINLFPNSKIPSHLTFDSMKLRGFVNQTINR---ELI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 NLKINELLVVEYYSR 188


>gi|12330472|gb|AAG52773.1| ribosomal protein 4 [Muscoflorschuetzia pilmaiquen]
          Length = 187

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++     +
Sbjct: 1   GALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           +  D I +K + K    +++    +++  +P +++ +         +I   L      + 
Sbjct: 117 QPQDFITIKDRQKSQGIIVKNMDFSQKYKIPNHLTFDSLEKKGVVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|50235360|gb|AAT70713.1| Rps4 [Eurhynchiastrum pulchellum]
          Length = 195

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L   LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVTQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +  +LVVE+YSR
Sbjct: 174 DRESIGLKINESLVVEYYSR 193


>gi|12642220|gb|AAK00192.1| rps4 [Encalypta ciliata]
 gi|67035736|gb|AAY62799.1| small ribosomal protein subunit 4 [Encalypta ciliata]
          Length = 189

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGILPGLTNKTPQLKSSS---INXSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PT+  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNNCIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A +++    +++  VP ++S +         +I   L      
Sbjct: 117 RCKPQDFISIKDRQKSQAIIIKNLDFSQKSKVPNHLSFDSLQKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|118626093|emb|CAL41755.1| small ribosomal protein 4 [Scapania compacta]
          Length = 191

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLXSKTLKSXSSY---IDRSXSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ VN  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHISVNNDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  +      ++    
Sbjct: 117 SYHCEPGDIITVRNKQKSQSIITKNLNLFQKLKIPSHLTFDSTQLQGSVN---ETVNREW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|37992647|gb|AAR06502.1| small ribosomal protein 4 [Pilotrichidium antillarum]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGILPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CESIGLKINELLVVEYYSR 192


>gi|46486564|gb|AAS98718.1| ribosomal protein subunit 4 [Spiridens camusii]
 gi|63191765|gb|AAY34842.1| small ribosomal protein subunit 4 [Spiridens reinwardtii]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|290794180|gb|ADD64420.1| small ribosomal protein subunit 4 [Habrodon perpusillus]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++           +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYISLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLXINELLVVEYYSR 192


>gi|295101438|emb|CBK98983.1| SSU ribosomal protein S4P [Faecalibacterium prausnitzii L2-6]
          Length = 200

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K      K  + +G +    G  K      S G        + K S +  QL+ KQK+
Sbjct: 1   MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNSNG------NMRKKQSEYATQLKEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + EK+F + + +A+   G T  NL+  +E RLD +V+R  F  T   ARQ V+H
Sbjct: 55  KFIYGVL-EKQFHNAYLKAEAMPGKTGENLLQLMERRLDNVVFRLGFAQTRRDARQLVSH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176
            H  VNG+ VNI SY  K GDVIEV++ S+  A   +    +     +P ++      + 
Sbjct: 114 AHFTVNGKKVNIPSYLIKAGDVIEVRESSRSSAKFAKLTGPEAPVVALPSWLDREAGTLK 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++P    D+ Y V    +L+VE YS+
Sbjct: 174 GVVNKLPER-SDIDYEVA--EHLIVELYSK 200


>gi|63191885|gb|AAY34902.1| small ribosomal protein subunit 4 [Scopelophila cataractae]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G        +P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 4   IRRLGTLPGLTNXTPQLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VBI 
Sbjct: 60  NYVRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNRLVBIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK  D I +K + K  A + +     ++  +P +++ N         +I   L    
Sbjct: 120 SYCCKPQDFITIKDRQKSQALITKHIDFYQKSKIPNHLTFNSLEKKGLVNQI---LDQES 176

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 177 IGLKINELLVVEYYSR 192


>gi|11228627|gb|AAG33099.1| small ribosomal protein 4 [Dicranella heteromalla]
          Length = 191

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R VNI 
Sbjct: 57  NYVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK  D I +K + K  A + +   L+++  VP +++ N         +I   L    
Sbjct: 117 SYHCKPQDFITIKDREKSQAMITKNVDLSQKYKVPNHLTFNFLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67036118|gb|AAY62985.1| small ribosomal protein subunit 4 [Horridohypnum mexicanum]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNKRKSEIIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|11466958|ref|NP_054379.1| ribosomal protein S4 [Epifagus virginiana]
 gi|266975|sp|P30056|RR4_EPIVI RecName: Full=Plastid 30S ribosomal protein S4
 gi|336927|gb|AAA65853.1| ribosomal protein S4 [Epifagus virginiana]
          Length = 202

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G       K       +      + R  K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPSLKKIRRLGALPGLTNKRSKAENDFI----KKLRSDKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++ R  F  A ++RG T   L+  LE RLD I++R     TI AARQ VNHRH
Sbjct: 57  NYG-LRERQLRKYFSIAIKTRGSTGKVLMQLLEMRLDNIIFRLGMASTIPAARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER---DVPEYISVNHDNMVA 177
           VLVNGR V+I SYRCK  D+I  + + +    +      +     + P ++++ H     
Sbjct: 116 VLVNGRIVDIPSYRCKSRDIIMARDEQQSNTFINNCINYSTHNRMEAPNHLTLLHP-FKG 174

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFY 204
              +I  S         +   LVVE+Y
Sbjct: 175 LVNQIIDSK---WVGFKINELLVVEYY 198


>gi|7576651|gb|AAF63938.1| ribosomal protein system 4 [Breutelia scoparia]
          Length = 190

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNDRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|63191718|gb|AAY34819.1| small ribosomal protein subunit 4 [Epipterygium wrightii]
          Length = 192

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTISGARQLVNHRHILVNDRLVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +     +   +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFIIIKDRQKSQTMISKKIDFYQNYKIPNHLTYNFLTKKGLVKQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIDLKINELLVVEYYSR 190


>gi|169823881|ref|YP_001691492.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328]
 gi|302379778|ref|ZP_07268262.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3]
 gi|303234754|ref|ZP_07321380.1| ribosomal protein S4 [Finegoldia magna BVS033A4]
 gi|226699066|sp|B0RZT8|RS4_FINM2 RecName: Full=30S ribosomal protein S4
 gi|167830686|dbj|BAG07602.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328]
 gi|302312366|gb|EFK94363.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3]
 gi|302494095|gb|EFL53875.1| ribosomal protein S4 [Finegoldia magna BVS033A4]
          Length = 198

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 12/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + K  RR+G N+ G PK+         G    R   K + +G+QL  KQ+++ 
Sbjct: 1   MARMMGPRFKQSRRLGLNVCGHPKANKRM-----GKGLGRNDKKLTEYGMQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRG--DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           YYG ++EK+    F++A  ++    T   ++  LE+RLD +V RA F  +I  ARQ V+H
Sbjct: 56  YYG-VNEKQMHKYFEKALNNKEGLTTGDVMVRQLETRLDNLVLRASFASSIRQARQMVSH 114

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
             + VNG+ V+I S++  EG VIE+K+KS+      E  +        YI    +N   T
Sbjct: 115 GLIRVNGKKVDIPSFQVAEGSVIELKEKSRSNELFKENYETNFAQSLPYID-KEENFKVT 173

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R+P   +    P+ +  +L+VE YSR
Sbjct: 174 LTRLPERQE---IPIEITDSLIVELYSR 198


>gi|78102717|gb|ABB21572.1| small ribosomal protein 4 [Plagiochila bicuspidata]
          Length = 189

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|37992545|gb|AAR06451.1| small ribosomal protein 4 [Hildebrandtiella cuspidans]
          Length = 194

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992629|gb|AAR06493.1| small ribosomal protein 4 [Papillaria nigrescens]
          Length = 192

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|23013991|ref|ZP_00053834.1| COG0522: Ribosomal protein S4 and related proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 151

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 100/152 (65%), Positives = 116/152 (76%), Gaps = 2/152 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT-RSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           MSKR  +K+KI+RR+G NLWGR KSP+N  +   PG HGQRRK KPS FG QL AKQK+K
Sbjct: 1   MSKRIEAKYKINRRLGANLWGRSKSPLNRGKENPPGQHGQRRK-KPSDFGTQLMAKQKLK 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG+ISEK+FR ++ EA R RGDTS NLI  LE RLD +VYR KF PT FAARQ VNH 
Sbjct: 60  GYYGNISEKQFRRLYDEAVRRRGDTSENLIGLLECRLDAVVYRLKFAPTPFAARQLVNHC 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           H+LVNG+ VNI SYR  EGDV+ VK KSK +A
Sbjct: 120 HILVNGKRVNIPSYRVNEGDVVSVKTKSKDMA 151


>gi|125662692|gb|ABN50296.1| small ribosomal protein 4 [Pseudolarix amabilis]
          Length = 195

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 9/201 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+        K P +          +    K S + ++   KQK++ +YG ++
Sbjct: 1   PRLKIIRRLKTLPGLTSKRPKHRNDSI----NRSSSRKISQYRIRPEEKQKLRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN  
Sbjct: 56  ERQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDH 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
            V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +         +I  +
Sbjct: 116 MVDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFHSLQYKGLINQIIDT 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVVE+YSR
Sbjct: 176 K---WITLKINELLVVEYYSR 193


>gi|37992497|gb|AAR06427.1| small ribosomal protein 4 [Distichophyllum freycinetii]
          Length = 194

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGILPGLTNKVLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRVARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKSQQKSEVIINKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CESIGLKINELLVVEYYSR 192


>gi|28194723|gb|AAO33623.1|AF480978_1 ribosomal protein S4 [Pseudocrossidium porphyreoneurum]
          Length = 196

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+
Sbjct: 1   PRVRIIRRLGILPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-IT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R
Sbjct: 57  ERQLLNYVRVARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNR 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SYRCK  D I +  + K    + +    +++  +P +++ N          I   
Sbjct: 117 IVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINNI--- 173

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
           L      + +   LVVE+YSR
Sbjct: 174 LNQESIGLKINELLVVEYYSR 194


>gi|11228641|gb|AAG33106.1| small ribosomal protein 4 [Ditrichum pallidum]
          Length = 187

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKTSST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A +++    +++  VP +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQKSQAMIIKNIDFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|63101005|gb|AAY33127.1| small ribosomal protein 4 [Antitrichia curtipendula]
          Length = 191

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|12330466|gb|AAG52770.1| ribosomal protein 4 [Dendroligotrichum dendroides]
 gi|218157215|gb|ACK58424.1| ribosomal protein subunit 4 [Dendroligotrichum dendroides]
 gi|293634021|gb|ADE60390.1| ribosomal protein subunit 4 [Oligotrichum suzukii]
 gi|293634083|gb|ADE60421.1| ribosomal protein subunit 4 [Polytrichastrum appalachianum]
 gi|293634119|gb|ADE60439.1| ribosomal protein subunit 4 [Polytrichum commune]
          Length = 189

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|63191861|gb|AAY34890.1| small ribosomal protein subunit 4 [Oxystegus tenuirostris]
          Length = 192

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S            K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLSNKTPNLKSSS---TSQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 LIGLKINELLVVEYYSR 190


>gi|63101053|gb|AAY33151.1| small ribosomal protein 4 [Calyptothecium praelongum]
          Length = 194

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63078628|gb|AAY29400.1| ribosomal protein S4 [Tortella humilis]
          Length = 194

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLSNKIPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|83940935|gb|ABC48864.1| rps4 [Sinojackia sarcocarpa]
          Length = 193

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P+     G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 8   GALPGLTNKRPI----AGTDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 62

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRC
Sbjct: 63  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRC 122

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  + + K  A +  +   +   ++P+++++          +I  S       + 
Sbjct: 123 KPRDIITARDEQKSRALIQNSFDSSHHEELPKHLTLYPFQYKGLVNQIIDSK---WIGLK 179

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 180 INELLVVEYYSR 191


>gi|37992729|gb|AAR06543.1| small ribosomal protein 4 [Zelometeorium patulum]
          Length = 195

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D + +K + K    + +  +  ++  +P +++           +I   L
Sbjct: 117 VDIPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|293634105|gb|ADE60432.1| ribosomal protein subunit 4 [Polytrichastrum sphaerothecium]
          Length = 189

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDCIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +    +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIS 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|66866216|gb|AAY57780.1| small ribosomal protein 4 [Bryobrothera crenulata]
          Length = 208

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 13/208 (6%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K      S        +R    S + ++L  KQK++ +YG 
Sbjct: 6   RGPRVKIIRRLGVLPGLINKISQLKSSSNDQSTSNKR---ISQYRIRLEEKQKLRFHYG- 61

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A + +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 62  ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 121

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASV------LEASQLAERDVPEYISVNHDNMVAT 178
              V+I SYRCK  D I +K + K    +             +  +P +++ +       
Sbjct: 122 DFIVDIPSYRCKPQDFITIKNQQKSEVIIXXXXXXKNMEFYQKSKIPNHLTYSSLEKKGL 181

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I   L      + +   LVVE+YSR
Sbjct: 182 VKQI---LDRESIGLKINELLVVEYYSR 206


>gi|78102727|gb|ABB21577.1| small ribosomal protein 4 [Plagiochila vincentina]
          Length = 189

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTFKSKSNY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  QQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +  K K  + V +     ++  +P ++  +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWIDLKINELLVVE 189


>gi|293634081|gb|ADE60420.1| ribosomal protein subunit 4 [Polytrichastrum altaicum]
 gi|293634091|gb|ADE60425.1| ribosomal protein subunit 4 [Polytrichastrum norwegicum]
          Length = 189

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +      ++   +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|78102713|gb|ABB21570.1| small ribosomal protein 4 [Plagiochila radiculosa]
          Length = 189

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKILKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + + +     ++  +P +++     +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFESTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|37992559|gb|AAR06458.1| small ribosomal protein 4 [Hypnella diversifolia]
          Length = 194

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    +    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P Y++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKMKIPNYLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|7576511|gb|AAF63868.1| ribosomal protein system 4 [Leucodon andrewsianus]
          Length = 190

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|239978418|ref|ZP_04700942.1| 30S ribosomal protein S4 [Streptomyces albus J1074]
 gi|291450314|ref|ZP_06589704.1| 30S ribosomal protein S4 [Streptomyces albus J1074]
 gi|291353263|gb|EFE80165.1| 30S ribosomal protein S4 [Streptomyces albus J1074]
          Length = 204

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRARKAEGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           + VNG  V+  SYR +  DV+ V+++S++      A +     E + P Y+ VN   +  
Sbjct: 119 IEVNGHKVDKPSYRVRPDDVVMVRERSREKHPFQVAREGGYDTEGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|37992455|gb|AAR06406.1| small ribosomal protein 4 [Catharomnion ciliatum]
          Length = 194

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNGYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P ++  N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLIYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|258645943|ref|ZP_05733412.1| ribosomal protein S4 [Dialister invisus DSM 15470]
 gi|260403312|gb|EEW96859.1| ribosomal protein S4 [Dialister invisus DSM 15470]
          Length = 197

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  ++ + K  RR G N++G PK+             + R+ K S +GLQL  KQK+K 
Sbjct: 1   MATNKNLRFKTSRRFGMNIYGHPKALKR-------QPAETRQKKMSEYGLQLAEKQKVKA 53

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y ++ E++F   + +A R  G    NL+S LE+RLD +VYRA F  +I  ARQ V+H  
Sbjct: 54  LY-NLLERQFYRYYDKARRMSGVVGENLLSLLETRLDNLVYRAGFARSIRQARQMVSHGL 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATF 179
           + V+G+ V+I SY  + G VI +K+  +      +A  +L   D+P Y+  + DN  AT 
Sbjct: 113 IAVDGKKVDIPSYPVRPGQVITLKEAYRTNEMFKQAFLELKSFDLP-YVEKSFDNWSATL 171

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +++PY   +   L+VE YS+
Sbjct: 172 VRTPLR-EELPYKDEVNETLIVELYSK 197


>gi|225376437|ref|ZP_03753658.1| hypothetical protein ROSEINA2194_02079 [Roseburia inulinivorans DSM
           16841]
 gi|225211813|gb|EEG94167.1| hypothetical protein ROSEINA2194_02079 [Roseburia inulinivorans DSM
           16841]
          Length = 197

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +    K  R +G           + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNKVPVLKRCRSLGLEPSYLGYDKKSNREL------KRANKKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK F + ++ AD+ +G T  NL++ LESRLD +V+R  F  T   ARQ V+H+ 
Sbjct: 55  IYGVL-EKPFHNYYERADQMKGMTGQNLMTILESRLDNVVFRLGFARTRKEARQIVDHKF 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           V VNG+ VNI SY  K GDVIE+K+K+K +  + +  +    R VP+++ V+ + +  T 
Sbjct: 114 VTVNGKQVNIPSYLVKAGDVIEIKEKNKNIQRMKDIVEVTGGRLVPDWLEVDAEKLQGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +PS  +     V +   L+VE YS+
Sbjct: 174 KELPSREQ---IDVPVDEMLIVELYSK 197


>gi|291549394|emb|CBL25656.1| SSU ribosomal protein S4P [Ruminococcus torques L2-14]
          Length = 197

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +        +N +S        R+ S+   +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGMDPIYLG---INKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A +  G T  NL+  LESRLD +V+R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKAKQQEGMTGENLMIILESRLDNVVFRLGLARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+K+  K      E  +  A   VPE++  + +N+  T 
Sbjct: 114 VLVNGKQVNIPSYLVKAGDVIEIKENKKGSQRYKEILEATAGNMVPEWLEADAENLRGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPNR---EAIDVPVDEMLIVELYSK 197


>gi|289599911|gb|ADD12906.1| ribosomal protein S4 [Hibbertia drummondii]
          Length = 189

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P         L    R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGSLPGLTSKRPKTR----SDLRNLSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I S
Sbjct: 56  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I VK + K  A +      +   ++P++++++         +I  S      
Sbjct: 116 YRCKPRDIITVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLINQIIDSK---WI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|157689414|gb|ABV65263.1| ribosomal protein S4 [Aphloia theiformis]
          Length = 185

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----RVGSDLRNQSRSVKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVNG  V+I SYRCK
Sbjct: 56  AGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRHILVNGHIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  +   K  A +      +   ++P++++++         +I  S       + +
Sbjct: 116 PRDIITARDAQKSRALIQNYLDSSLHEELPKHLTLHPSQYKGLVNQIIDSK---WIGLKI 172

Query: 196 QPNLVVEFYSR 206
              L+VE+YSR
Sbjct: 173 NELLIVEYYSR 183


>gi|37992717|gb|AAR06537.1| small ribosomal protein 4 [Trachypus bicolor]
          Length = 192

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P         ++      K S + L+L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRLRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D + +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SVGLKINELLVVEYYSR 190


>gi|7576585|gb|AAF63905.1| ribosomal protein system 4 [Leskea gracilescens]
          Length = 190

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|7576599|gb|AAF63912.1| ribosomal protein system 4 [Sanionia georgico-uncinata]
          Length = 190

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IALKINELLVVEYYSR 189


>gi|16565397|gb|AAL26213.1|AF313613_1 small ribosomal protein 4 [Austrobaileya scandens]
          Length = 190

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 9/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   MRRLKTLPGLTSKRP----RSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLL 55

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I 
Sbjct: 56  RYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRLVDIP 115

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D+I  K + +    +      +   ++P++++++         +I  S     
Sbjct: 116 SYRCKPRDIITTKDEHRSRTLIQNYIDSSPHEELPKHLTLHSLQYKGLVNQIVDSQ---W 172

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 173 VGLKINELLVVEYYSR 188


>gi|291087195|ref|ZP_06345679.2| ribosomal protein S4 [Clostridium sp. M62/1]
 gi|291075940|gb|EFE13304.1| ribosomal protein S4 [Clostridium sp. M62/1]
 gi|295092573|emb|CBK78680.1| SSU ribosomal protein S4P [Clostridium cf. saccharolyticum K10]
          Length = 197

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +  +         + R+       +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLDLDPIYLGIDKKSNRNS------KRANKKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A R  G    NL+  LESRLD +++R  F  T    RQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKASRMNGQVGTNLMIILESRLDNVLFRMGFGRTRKETRQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDVIE+K+K K      +  +  A R VP ++ V+ +N+  T 
Sbjct: 114 VLVNGKCVNIPSYLVKAGDVIEIKEKYKSSQRYKDVLEVTAGRLVPAWLEVDQENLRGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KELPTRDE---IDVPVNEVLIVELYSK 197


>gi|160415782|gb|ABX39198.1| small ribosomal protein 4 [Dryptodon austrofunalis]
          Length = 188

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|28194673|gb|AAO33598.1|AF480953_1 ribosomal protein S4 [Dialytrichia mucronata]
          Length = 192

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I
Sbjct: 57  LNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|37992465|gb|AAR06411.1| small ribosomal protein 4 [Cladomnion ericoides]
          Length = 194

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K +      + +     ++  +P +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFIIIKNEKNSEGVIDKNEDFYQKYKIPNHLTYSFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992619|gb|AAR06488.1| small ribosomal protein 4 [Orthostichopsis tetragona]
          Length = 191

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPHDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|42405302|gb|AAS13477.1| rps4 small ribosomal protein [Hypopterygium tamarisci]
 gi|157785986|gb|ABV74167.1| small ribosomal protein 4 [Hypopterygium discolor]
          Length = 194

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG  V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNGYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|134274701|emb|CAL30292.1| small ribosomal protein 4 [Cheilolejeunea trifaria]
          Length = 186

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 11/196 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K           L       K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQL 53

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD  ++      TI  ARQ VNHRH+ +N   VNI
Sbjct: 54  LKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHRHIFINDYIVNI 113

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK GD+I +K K K  + + +   L+++  VP +++ +   +     +        
Sbjct: 114 PSYNCKPGDIITIKNKEKSQSIINKNMNLSQKLQVPNHLTFDSTQLRGLVNQTIRR---E 170

Query: 190 PYPVIMQPNLVVEFYS 205
              + +   LVVE+YS
Sbjct: 171 WIDLKINELLVVEYYS 186


>gi|145596878|ref|YP_001161175.1| 30S ribosomal protein S4 [Salinispora tropica CNB-440]
 gi|145306215|gb|ABP56797.1| SSU ribosomal protein S4P [Salinispora tropica CNB-440]
          Length = 202

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 9/203 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K K  R +G  L  +       R + PG HG+ RK   S + ++L  KQ++K  Y  ++
Sbjct: 6   PKIKRSRALGIPLTPKCVRYFERRPFPPGQHGRSRK-STSDYKIRLLEKQRLKAQY-HVN 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E + R  F    R    T   LI  LE+RLD +V R+    TI+ ARQ V HRH+ VNGR
Sbjct: 64  EGQLRRAFTRVARLESKTGEALIVDLETRLDALVLRSGLARTIYQARQTVTHRHITVNGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIP 183
            V+  S R + GDVI V   S+  A  L     +  AER  P Y++VN  ++    +R+P
Sbjct: 124 RVDRPSARLRPGDVIAVATGSRTKAPFLVAAAGAHAAERSAP-YLAVNLADLTVRLIRLP 182

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
              +    PV  Q  LVVE+YSR
Sbjct: 183 LRSE---VPVTCQEQLVVEYYSR 202


>gi|42556456|gb|AAS19823.1| small ribosomal protein 4 [Mastigolejeunea auriculata]
 gi|134274699|emb|CAL30291.1| small ribosomal protein 4 [Mastigolejeunea auriculata]
          Length = 188

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K           +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTGKISKTK------IDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++      TI +ARQ VNHRH+ +N   VNI 
Sbjct: 54  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNIP 113

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +         
Sbjct: 114 SYNCKPGDIITIKNKEKSQSIISKNINLSQKLQIPNHLTFDSTQLRGLVNQTIRR---EW 170

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 171 IDLKINELLVVEYYSR 186


>gi|37992653|gb|AAR06505.1| small ribosomal protein 4 [Pilotrichum procerum]
          Length = 194

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P         +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLK---ASSITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +L ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNLELYQKFKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|32172406|sp|O22020|RR4_CYAME RecName: Full=30S ribosomal protein S4, chloroplastic
          Length = 190

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 19/206 (9%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I RR+G       KSP N R+  PG H  + +    Y G+ L+ +QK++ 
Sbjct: 1   MSRYLGPRVRIIRRLGILPAFTNKSP-NKRTGVPGEHAHKTRKLSEYAGV-LQGEQKLQY 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG I+  +    F++A +SR  T   L+  LE+RLD +VYRA F PT+ AARQ VNH H
Sbjct: 59  YYG-ITNNQLARYFRQAKKSRASTGIELLKMLETRLDHVVYRAGFAPTLPAARQLVNHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  V I S+ C+   +IEVK KS   A            +P Y+ V +      FV
Sbjct: 118 VKVNGNQVTIASFACQVNHIIEVKAKSPSSAQ-----------LPPYLQVEN-----QFV 161

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++   ++       +   LVVE+Y+R
Sbjct: 162 KMIQPVEKDWLAFRVNELLVVEYYTR 187


>gi|63101075|gb|AAY33162.1| small ribosomal protein 4 [Rutenbergia madagassa]
          Length = 194

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKYEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 SESIGLKINELLVVEYYSR 192


>gi|328881154|emb|CCA54393.1| SSU ribosomal protein S4p [Streptomyces venezuelae ATCC 10712]
          Length = 204

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  DV+ V+++S+       A +    A+ + P Y+ VN   +  
Sbjct: 119 IQVNGGKVDKPSFRVRPDDVVMVRERSRTKPLFEMAREGGFAADGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|282866226|ref|ZP_06275273.1| ribosomal protein S4 [Streptomyces sp. ACTE]
 gi|282559010|gb|EFB64565.1| ribosomal protein S4 [Streptomyces sp. ACTE]
          Length = 204

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRARKAEGKTGEALVVELERRLDALVLRSGIAKTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  DV++V+++S+       A +     E + P Y+ VN   +  
Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVQVRERSRSKVPFQVAREGGYDTEGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|160881758|ref|YP_001560726.1| RNA-binding S4 domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|189045375|sp|A9KJG7|RS4_CLOPH RecName: Full=30S ribosomal protein S4
 gi|160430424|gb|ABX43987.1| RNA-binding S4 domain protein [Clostridium phytofermentans ISDg]
          Length = 198

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 12/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++  S   K  R +G           + R++       R   K S +G QLR KQK K 
Sbjct: 1   MARDMSPVLKRCRALGLEPTFLGIDKKSNRNFA------RAGKKISEYGTQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK FR+ F +A + + G T  NL+  LE RLD +++R  +  T   ARQ V+H+
Sbjct: 55  IYGVL-EKPFRNNFDKAKKLKYGTTGENLLILLELRLDNVMFRMGYGRTRTEARQIVDHK 113

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVAT 178
           HVLVNG+ VNI SY+ K GDVI +K+K K      +  ++ + R VP ++  +H+N+  T
Sbjct: 114 HVLVNGKCVNIPSYQVKAGDVISIKEKCKSAQRYKDILEVTDGRTVPAWLEADHENLTGT 173

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              IP+  +     V +   L+VE YS+
Sbjct: 174 VKEIPTRDQ---IDVPVNEVLIVELYSK 198


>gi|37992587|gb|AAR06472.1| small ribosomal protein 4 [Lopidium concinnum]
 gi|37992589|gb|AAR06473.1| small ribosomal protein 4 [Lopidium concinnum]
 gi|37992591|gb|AAR06474.1| small ribosomal protein 4 [Lopidium plumarium]
          Length = 195

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 7/199 (3%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       KS    +     ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V
Sbjct: 58  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K  + + +  +  ++  +  +++ +         +I   L 
Sbjct: 118 DIPSYRCKPQDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIGLKINELLVVEYYSR 193


>gi|7576591|gb|AAF63908.1| ribosomal protein system 4 [Lembophyllum divulsum]
          Length = 189

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|328488164|gb|AEB19895.1| small ribosomal protein 4 [Pachyschistochila trispiralis]
          Length = 191

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G +     K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGISPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  + R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTILRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|42556516|gb|AAS19853.1| small ribosomal protein 4 [Trocholejeunea sandvicensis]
          Length = 188

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K           +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTGKISKTK------IDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++      TI +ARQ VNHRH+ +N   VNI 
Sbjct: 54  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNIP 113

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +         
Sbjct: 114 SYNCKPGDIITIKNKEKSQSIISKNINLSQKTQIPNHLTFDSTQLRGLVNQTIRR---EW 170

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 171 IDLKINELLVVEYYSR 186


>gi|12330468|gb|AAG52771.1| ribosomal protein 4 [Dendroligotrichum squamosum]
          Length = 189

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + +  A +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIXDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|121761855|gb|ABM65013.1| ribosomal protein S4 [Plagiomnium rhynchophorum]
          Length = 194

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R +
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLI 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I     
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKNGLVNQILDRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --FIDLKINELLVVEYYSR 192


>gi|63100975|gb|AAY33112.1| small ribosomal protein 4 [Pylaisia speciosa]
          Length = 191

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A + +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETLINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|37992649|gb|AAR06503.1| small ribosomal protein 4 [Pilotrichum bipinnatum]
          Length = 194

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P         +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLK---ASSITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +L ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIELYQKFKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992415|gb|AAR06386.1| small ribosomal protein 4 [Aerobryopsis longissima]
 gi|37992417|gb|AAR06387.1| small ribosomal protein 4 [Aerobryopsis wallichii]
          Length = 192

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|260886902|ref|ZP_05898165.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
 gi|330839300|ref|YP_004413880.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
 gi|260863501|gb|EEX78001.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
 gi|329747064|gb|AEC00421.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
          Length = 197

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+   S+  K  R +G        S  + R        +R+  K S +G+QL+ KQK K 
Sbjct: 1   MAIDRSATLKRCRSLGIEPGMVGISRQSKRQP------RRQARKVSEYGMQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  +++A    G T  NL+  LE R+D +VYR     T   ARQ V H H
Sbjct: 55  IYGVL-EKQFRKYYEKAKTMPGVTGENLLGLLERRIDNVVYRLGLAQTRRQARQLVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATF 179
           + VNG+ ++I S   +  D I + +KS+  A     A      ++P +++ +   +  T 
Sbjct: 114 IRVNGKRLDIPSALVRAEDEITIDEKSRSNAFFKALAENYKPLNLPAWLAADGAKLSGTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R PS  +     V +    +VE YSR
Sbjct: 174 TRYPSRDE---IDVPVNEQAIVELYSR 197


>gi|32344858|gb|AAM82188.1| ribosomal protein S4 [Erythrophyllopsis boliviana]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +    K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITINDGKKSQVMITKNVGFSQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|63191823|gb|AAY34871.1| small ribosomal protein subunit 4 [Pterygoneurum ovatum]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VNIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|42405296|gb|AAS13474.1| rps4 small ribosomal protein [Callicostella colombica]
          Length = 194

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K      S    +       K S + ++L  KQK++ +YG I+E++
Sbjct: 2   KIIRRLGVLPGLTNKISELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+
Sbjct: 58  LLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVD 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I      
Sbjct: 118 IPSYRCKPQDSITIKNQQKSETIISKNLEFYQKIKIPNHLTYNFLEKKGLINQILDRD-- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 -SIGLKINELLVVEYYSR 192


>gi|32344860|gb|AAM82189.1| ribosomal protein S4 [Erythrophyllopsis fuscula]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRVARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +    K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITINDHKKSQVMITKNVGFSQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|295839931|ref|ZP_06826864.1| ribosomal protein S4 [Streptomyces sp. SPB74]
 gi|302517976|ref|ZP_07270318.1| ribosomal protein S4 [Streptomyces sp. SPB78]
 gi|318057087|ref|ZP_07975810.1| 30S ribosomal protein S4 [Streptomyces sp. SA3_actG]
 gi|318077859|ref|ZP_07985191.1| 30S ribosomal protein S4 [Streptomyces sp. SA3_actF]
 gi|197696761|gb|EDY43694.1| ribosomal protein S4 [Streptomyces sp. SPB74]
 gi|302426871|gb|EFK98686.1| ribosomal protein S4 [Streptomyces sp. SPB78]
          Length = 204

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRARKAEGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  DV+ V+++S+       A +     + + P Y+ VN   +  
Sbjct: 119 IEVNGTKVDKPSFRVRPDDVVMVRERSRSKHPFQVAREGGYDTDGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|86438888|emb|CAJ55420.1| small ribosomal protein 4 [Plagiochila elegans]
          Length = 187

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGALPGLTGKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   VNI
Sbjct: 57  LKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++ +     
Sbjct: 117 PSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLQGSVNQMINR---E 173

Query: 190 PYPVIMQPNLVVEF 203
              + +   LVVE+
Sbjct: 174 WINLKINELLVVEY 187


>gi|293634011|gb|ADE60385.1| ribosomal protein subunit 4 [Oligotrichum austroaligerum]
          Length = 189

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R     TI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|121761847|gb|ABM65009.1| ribosomal protein S4 [Plagiomnium integrum]
          Length = 191

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRVARKAKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +     ++  +P++++ N  N      +I        
Sbjct: 117 SYRCKPQDFITIKDRQKSQIMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD---S 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|22854733|gb|AAN09786.1| small ribosomal protein 4 [Sclerodontium clavinerve]
          Length = 191

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 3   RLGTLPGLTNKIPELKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 59  VRIARKAKGSTGQILLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNNRIVNIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K        +++ +  +++  VP +++ N         +I   L      
Sbjct: 119 RCKPQDFITIKDPQNFQDMIIKNADFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|26554211|ref|NP_758145.1| 30S ribosomal protein S4 [Mycoplasma penetrans HF-2]
 gi|41017842|sp|Q8EV12|RS4_MYCPE RecName: Full=30S ribosomal protein S4
 gi|26454220|dbj|BAC44549.1| ribosomal protein S4 [Mycoplasma penetrans HF-2]
          Length = 202

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 104/208 (50%), Gaps = 10/208 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN--TRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+   S  K  RR G +L    +  +    R+Y PG HG +R     Y G QL+ KQKM
Sbjct: 1   MSRYLGSITKKSRRYGFSLLETEREFIKGKKRTYAPGQHGNKRVKLSGY-GEQLQEKQKM 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
              YG +++++FR  F  A   +G  + N    LESRLD +VYR  F PT  AARQ VNH
Sbjct: 60  MYLYG-LNDRQFRRTFVIAKHMKGALTLNTFIALESRLDNLVYRMGFAPTRRAARQLVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+L++G+ V I S   K    IEV  KSK L  V   +  A     +++  +       
Sbjct: 119 GHILLDGKKVTIPSCMVKLEQTIEVAPKSKDLPIV---AAGASNTPCKFVDSDLKTKKGK 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +VR P   +    P  +    VVE+++R
Sbjct: 176 YVRFPERDE---LPEGINEAYVVEWFNR 200


>gi|47606946|gb|AAT36393.1| ribosomal protein subunit 4 [Rhizogonium pennatum]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|17025871|gb|AAL32100.1| ribosomal protein 4 [Mitthyridium sp. Streimann 63086]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K P    S    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKLIRRLGTLSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L
Sbjct: 117 VNIPSYQCKSQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 NQESIGLKINELLVVEYYSR 193


>gi|67036074|gb|AAY62963.1| small ribosomal protein subunit 4 [Ptychodium plicatum]
          Length = 194

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       ++P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNRTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE+RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLETRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|289599866|gb|ADD12884.1| ribosomal protein S4 [Davilla nitida]
          Length = 188

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGSLPGLTSKRPKPR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKY 55

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R VNI SY
Sbjct: 56  VRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVNIPSY 115

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D+I VK + K  A +      +   ++P++++++         +I  S       
Sbjct: 116 RCKPRDIITVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVG 172

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 173 LKINELLVVEYYSR 186


>gi|297195512|ref|ZP_06912910.1| 30S ribosomal protein S4 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722128|gb|EDY66036.1| 30S ribosomal protein S4 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 204

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK     + ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNS-DYKVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISEK+    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISEKQMARAYDRARKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  DV+ V+++S++      A +    A+ + P Y+ VN   +  
Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVMVRERSREKTLFQVAREGGFAADGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P   +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPQRKE---VPVICDEQLVVEYYAR 204


>gi|160415792|gb|ABX39203.1| small ribosomal protein 4 [Dryptodon torquatus]
          Length = 188

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|7576569|gb|AAF63897.1| ribosomal protein system 4 [Hypnum imponens]
          Length = 190

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|90970058|gb|ABE02798.1| ribosomal protein S4 [Passiflora deidamioides]
          Length = 183

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIVGSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPTGPVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|42556504|gb|AAS19847.1| small ribosomal protein 4 [Schistochila laminigera]
          Length = 191

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI AARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPAARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K    + +   L ++  +P ++  +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKKKSQLMINKNLNLLQKLKIPNHLIFDSTQLRGLVDQ---RINRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|15145844|gb|AAK83540.1| rps4 [Tayloria orthodonta]
 gi|42718070|gb|AAS38457.1| rps4 [Tayloria chiapensis]
          Length = 189

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PT+  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  + +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNQQKSQAIINKNIEFSQKSKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|63101081|gb|AAY33165.1| small ribosomal protein 4 [Hookeriopsis cuspidata]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K      S    +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIIRRLGVLPGLTNKIAELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYSI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I    
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIGLKINELLVVEYYSR 193


>gi|42794697|gb|AAS45744.1| Rps4 [Semiramisia speciosa]
          Length = 211

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K        +L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKXXXXXXXXRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     +   +++G     L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIXGKAKGSPGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKHKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|47606950|gb|AAT36395.1| ribosomal protein subunit 4 [Trachyloma planifolium]
 gi|63101077|gb|AAY33163.1| small ribosomal protein 4 [Trachyloma planifolium]
          Length = 195

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +  +  ++  +P ++  +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|325479161|gb|EGC82258.1| ribosomal protein S4 [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 197

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +   +K  R +G +      +  + R+        RR++K S +G+Q R KQK K 
Sbjct: 1   MAVSKDPVYKKARALGISPAYLGYTGESNRTLP------RRRAKLSEYGMQQREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FR  ++ A + +G T   LI   E RLD + +R+    T   ARQ V H H
Sbjct: 55  IYG-VSEKQFRGYYEAASKMKGQTGEQLIILCERRLDNVAFRSGLARTRREARQIVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+ +EGDVIEV++KS+         +  A   V E+++ + +N+  T 
Sbjct: 114 LTVNGKQVDIPSYQIEEGDVIEVREKSRSSQLFKAIKETNATFGVVEWLTSDIENLKVTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P+  +D+  PV  +  ++VEFYS+
Sbjct: 174 DRFPTR-EDIDIPV--EERMIVEFYSK 197


>gi|291562745|emb|CBL41561.1| SSU ribosomal protein S4P [butyrate-producing bacterium SS3/4]
          Length = 197

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +  +         + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVDRVPVLKRCRSLDLDPIYLGIDKKSNRES------KRANKKISEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A+R  G T  NL+  LE RLD +++R  F  T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYDKAERLNGQTGENLMILLERRLDNVIFRLGFARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GDV+E+++K+K         +  A R VP ++  +H+N+    
Sbjct: 114 VLVNGKCVNIPSYLVKAGDVVEIREKNKGDNHYKLVLETTAGRLVPAWLESDHENLKGEI 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +   L+VE YS+
Sbjct: 174 KTLPTREE---IDVPVNEMLIVELYSK 197


>gi|239939944|ref|ZP_04691881.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 15998]
 gi|239986428|ref|ZP_04707092.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 11379]
 gi|291443375|ref|ZP_06582765.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 15998]
 gi|291346322|gb|EFE73226.1| 30S ribosomal protein S4 [Streptomyces roseosporus NRRL 15998]
          Length = 204

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  D+++V+++S+       A +     E + P Y+ VN   +  
Sbjct: 119 IEVNGGKVDKPSFRVRPDDIVQVRERSRSKVPFQVAREGGYDTEGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|320011906|gb|ADW06756.1| ribosomal protein S4 [Streptomyces flavogriseus ATCC 33331]
          Length = 204

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRARKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  DV++V+++S+       A +     + + P Y+ VN   +  
Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVQVRERSRSKVPFQVAREGGYDTDGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|160415804|gb|ABX39209.1| small ribosomal protein 4 [Bucklandiella crispipila]
          Length = 188

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|67035718|gb|AAY62790.1| small ribosomal protein subunit 4 [Calymperes lonchophyllum]
          Length = 194

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG ++E+
Sbjct: 1   VKIIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-LTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R   VPTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIVPTIPGARQLVNHRHILVNNCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SY+CK  D I +K   K    +++    + +  +P +++ N         +I   L 
Sbjct: 117 NIPSYQCKPQDFITIKDPQKYQTMIVKNINFSPKYKIPSHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|37992665|gb|AAR06511.1| small ribosomal protein 4 [Ptychomnion cygnisetum]
          Length = 194

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K +      + +     ++  +P +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992617|gb|AAR06487.1| small ribosomal protein 4 [Orthostichopsis praetermissa]
          Length = 191

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|63078652|gb|AAY29412.1| ribosomal protein S4 [Tuerckheimia valeriana]
          Length = 194

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRQKSQVMITKNVYFSQKYKIPNHLTFNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|33413189|emb|CAD86770.1| ribosomal protein small subunit 4 [Dicranoloma billarderi]
          Length = 190

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I VK + K  A +++    +++  VP +++ +         +I   L     
Sbjct: 117 YRCKPQDFITVKNRQKSQAMIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|157689466|gb|ABV65289.1| ribosomal protein S4 [Elaeagnus sp. Nickrent 2898]
          Length = 184

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R SK S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKKP----RAGSDLRNQSRPSKKSQYRIRLEEKQKLRFHYG-LTEQQLLKYIRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+ VNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHIFVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I VK + K  A V      A   ++P++++++         +I  S       + + 
Sbjct: 116 RDIITVKDEQKSRALVQNYLDSASHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|7576619|gb|AAF63922.1| ribosomal protein system 4 [Pilosium chlorophyllum]
          Length = 190

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTKKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE R D +++R     TI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMATTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY+CK  D I +K + K  A + +  +   E  VP +++ N         +I   L    
Sbjct: 117 SYQCKPQDFITIKNQQKFEAIISKNIEFYQESKVPNHLTYNSLGKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|74273233|gb|ABA01316.1| ribosomal protein S4 [Barteria fistulosa]
          Length = 186

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  LAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I  + + K  A +  +   + + ++P+++++          +I  S       + 
Sbjct: 116 KPRDTIAARDEQKSRALIQNSLDSSPQEELPKHLTLQPFQYNGLVNQIIDSK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|78102657|gb|ABB21542.1| small ribosomal protein 4 [Plagiochila fastigiata]
 gi|78102695|gb|ABB21561.1| small ribosomal protein 4 [Plagiochila montagnei]
          Length = 189

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+L+N   
Sbjct: 57  RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHILINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|63078585|gb|AAY29379.1| ribosomal protein S4 [Pleurochaete squarrosa]
          Length = 191

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|47606894|gb|AAT36367.1| ribosomal protein subunit 4 [Euptychium cuspidatum]
          Length = 199

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGXRVKIIRRLGTLQGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITEQQLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTISGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I VK +      + +     ++  +P +++           +I
Sbjct: 117 NDCIVNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESIGLKINELLVVEYYSR 197


>gi|7576525|gb|AAF63875.1| ribosomal protein system 4 [Orthostichopsis tetragona]
          Length = 190

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPHDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|228480564|gb|AAY62917.2| small ribosomal protein subunit 4 [Pleurozium schreberi]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLTNKTPQLK---ASSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L   LE RLD +++R    PTI  ARQ VNH H+LVN   V
Sbjct: 57  QLLNYVRJARKAKGSTGEVLSQLLEMRLDNVIFRLGMAPTIPGARQLVNHTHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIIGKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|254283192|ref|ZP_04958160.1| ribosomal protein S4 [gamma proteobacterium NOR51-B]
 gi|219679395|gb|EED35744.1| ribosomal protein S4 [gamma proteobacterium NOR51-B]
          Length = 154

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/158 (42%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QLR KQK+++ YG + EK+FR+ +KEA R +G T  NL+  LE RLD +VYR  F  T 
Sbjct: 1   MQLREKQKVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLECRLDNVVYRMGFGSTR 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168
             ARQ V H+ +L+N   VNI SY+ K GDV+ +++K+K+   V  A  LAE R  P +I
Sbjct: 60  AEARQLVAHKGILINNAVVNIPSYQVKPGDVVSIREKAKKQLRVQAALSLAEQRGEPVWI 119

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            VN++ +  TF   P           +  NL+VE YS+
Sbjct: 120 EVNNEKLEGTFKAKPERAD---LSSEINENLIVELYSK 154


>gi|37992595|gb|AAR06476.1| small ribosomal protein 4 [Meteoridium remotifolium]
          Length = 193

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   V+
Sbjct: 57  LLNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D + +K + K    + +  +  ++  +P +++           +I   L  
Sbjct: 117 IPSYRCKPQDFVTMKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|67036028|gb|AAY62940.1| small ribosomal protein subunit 4 [Lindigia aciculata]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D + +K K K    + +  +L ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFVTIKNKRKSENIISKNMELYQKYKIPNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992709|gb|AAR06533.1| small ribosomal protein 4 [Trachyxiphium vagum]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---IIQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K++ K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKKQRKSEAIISKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035680|gb|AAY62771.1| small ribosomal protein subunit 4 [Schistomitrium brevi-apiculatum]
          Length = 192

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+        K+     +    +       K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLXTLPGLTNKTSQLKSNS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI
Sbjct: 57  LNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  + V +  + ++   VP +++++         +I   L   
Sbjct: 117 PSYRCKPQDFISIKNRQKSQSIVAKTIEFSQEYKVPNHLTLDSLEKKGLVNQI---LNHE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|49182789|gb|AAT57856.1| small ribosomal protein [Radula perrottetii]
          Length = 195

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G+      K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGDLPGLSNKTLKPKSSY---IDRSVSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+     + A  ++G T   L+  LE RLD  ++     PTI  ARQ VNH+H+ +N  +
Sbjct: 57  KQLLKYVRIARNAKGSTGQILLQLLEMRLDNTIFCLGMAPTIPGARQLVNHKHIFINNST 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++   K  + + +      + ++P ++  +   +     +    +
Sbjct: 117 VDIPSYNCELGDIITIRNTHKSKSIITKNINSFRKLEIPNHLIFDSTQLRGLINQ---RI 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 PCNWISLKINELLVVEYYSR 193


>gi|37992485|gb|AAR06421.1| small ribosomal protein 4 [Daltonia gracilis]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKVIRRLGVLPGLTNKVLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQQKSEVIINKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CESIGLKINELLVVEYYSR 192


>gi|37992577|gb|AAR06467.1| small ribosomal protein 4 [Lepidopilum scabrisetum]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    +    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSNS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K  A + +  +  ++  +P Y++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNKKKSEAIISKNIEFYQKIKIPNYLTYNFVEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|320173940|gb|EFW49116.1| SSU ribosomal protein S4p (S9e) [Shigella dysenteriae CDC 74-1112]
          Length = 152

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/156 (40%), Positives = 98/156 (62%), Gaps = 5/156 (3%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           +R KQK+++ YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   
Sbjct: 1   MREKQKVRRIYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAE 59

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISV 170
           ARQ V+H+ ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V
Sbjct: 60  ARQLVSHKAIMVNGRIVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEV 119

Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   M  TF R P           +  +L+VE YS+
Sbjct: 120 DAGKMEGTFKRKPERSD---LSADINEHLIVELYSK 152


>gi|80974168|gb|ABB53777.1| small ribosomal subunit protein 4 [Hampeella pallens]
          Length = 197

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG I
Sbjct: 1   GPRVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG-I 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHR +LVN 
Sbjct: 57  TERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNILFRLNMAPTIPGARQLVNHRQILVNN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPS 184
             VNI SYRCK  D I VK        + +    +++D +P ++  +         +I  
Sbjct: 117 CIVNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKDKIPNHLIYSSLEKKGLVNKI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 175 -LDRESIGLKINELLVVEYYSR 195


>gi|63101051|gb|AAY33150.1| small ribosomal protein 4 [Palisadula chrysophylla]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGILPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I+++    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRVARKAKGSTGEVLLQLLEMRLDNIIFQLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|182439823|ref|YP_001827542.1| 30S ribosomal protein S4 [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326780487|ref|ZP_08239752.1| ribosomal protein S4 [Streptomyces cf. griseus XylebKG-1]
 gi|226695079|sp|B1W3H7|RS4_STRGG RecName: Full=30S ribosomal protein S4
 gi|178468339|dbj|BAG22859.1| putative 30S ribosomal protein S4 [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660820|gb|EGE45666.1| ribosomal protein S4 [Streptomyces cf. griseus XylebKG-1]
          Length = 204

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  D+++V+++S+       A +     + + P Y+ VN   +  
Sbjct: 119 IEVNGGKVDKPSFRVRPDDIVQVRERSRSKVPFQVAREGGYDTDGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|37992583|gb|AAR06470.1| small ribosomal protein 4 [Leucomium strumosum]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKLKIPNHLTYNFLEKKGLINQI---LH 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|12330488|gb|AAG52781.1| ribosomal protein 4 [Oedipodium griffithianum]
          Length = 189

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 10/195 (5%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           R+G       K+        PG   Q     K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RLGALPGLTNKTSQLK----PGYINQSVSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLN 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 56  YVRIARGAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +    +++  +P +++ N         +I   L     
Sbjct: 116 YRCKPQDFITIKDRQKSQAIIAKNMDFSQKYKIPNHLTFNSLQKKGLVNQI---LDRESI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 GLKINELLVVEYYSR 187


>gi|37992407|gb|AAR06382.1| small ribosomal protein 4 [Actinodontium sprucei]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K      S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLVSKISELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K  A + +  +  ++  +P +++ N         +I     
Sbjct: 117 DIPSYRCKPQDFITIKNKKKSEAIISKNIEFYQKIKIPNHLTYNFLEKKGLINQILDRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIGLKINELLVVEYYSR 192


>gi|3098208|gb|AAC15552.1| small ribosomal protein 4 [Tayloria lingulata]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN R V
Sbjct: 57  QLLNYVRVARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHIIVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P+++  N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKARQKSQVIINKNIEFYQKHKIPDHLIYNSLKKQGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63101029|gb|AAY33139.1| small ribosomal protein 4 [Pseudoleskeopsis imbricata]
          Length = 189

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQQKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|78102633|gb|ABB21530.1| small ribosomal protein 4 [Plagiochila circinalis]
          Length = 189

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|74273201|gb|ABA01300.1| ribosomal protein S4 [Passiflora cirrhiflora]
          Length = 183

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIVGSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|42556466|gb|AAS19828.1| small ribosomal protein 4 [Nipponolejeunea pilifera]
          Length = 192

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       ++P    SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGFTSRTPKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++     PTI +ARQ VNHRH+ +N  +VN+ 
Sbjct: 57  KYVRIARKTKGSTGQILLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINNYTVNVP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + + +     ++ ++P +++ N   +     +         
Sbjct: 117 SYNCEPGDIITIKNKEKSQSIITKNINSFQKLEIPNHLTFNSIELQGFVNQTIRR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|46811052|gb|AAT01844.1| small ribosomal protein 4 [Schistochila appendiculata]
          Length = 195

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I
Sbjct: 57  LKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY C+ GD+I ++ K K  + +     L ++   P +++ +   +     +        
Sbjct: 117 PSYNCELGDIIGIQNKQKSQSMITRNLGLLQKLKTPNHLTFDSTQLRGLVNQKVHR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 FINLKINELLVVEYYSR 190


>gi|7576545|gb|AAF63885.1| ribosomal protein system 4 [Haplohymenium triste]
          Length = 190

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|63191827|gb|AAY34873.1| small ribosomal protein subunit 4 [Tortula subulata]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVIITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|111283700|gb|ABH09200.1| small ribosomal protein 4 [Lejeunea cavifolia]
          Length = 188

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K           L       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGSLPGLTSKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-V 53

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++      TI  ARQ VNHRH+ +N 
Sbjct: 54  TERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHRHISIND 113

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             VNI SY CK GD+I +K K K    + +   L+++   P +++ +   +     +   
Sbjct: 114 YIVNIPSYNCKPGDIITIKNKEKSQLIINKNINLSQKLQTPNHLTFDSTKLRGLVNQTIR 173

Query: 185 SLKDVPYPVIMQPNLVVE 202
                   + +   LVVE
Sbjct: 174 R---EWIDLKINELLVVE 188


>gi|50299385|gb|AAT73597.1| small ribosomal protein 4 [Plagiochila deflexa]
          Length = 183

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 5/187 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   VNI SY C+ GD+I +  + K  ++V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVNIPSYNCEPGDIITIGNEQKSRSTVTKNINSFQKLKIPSHLTFDSTQLRGSV 176

Query: 180 VRIPSSL 186
            ++ +  
Sbjct: 177 NQMINRE 183


>gi|42794666|gb|AAS45730.1| Rps4 [Polyclita turbinata]
          Length = 211

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K   S + ++LR  Q ++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTANSRRTQSRFVKKK--KSQYHIRLRENQXLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G     L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSXGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKHKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|50235328|gb|AAT70697.1| Rps4 [Rhynchostegiella tenella]
          Length = 195

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPRDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42794643|gb|AAS45719.1| Rps4 [Ceratostema silvicola]
          Length = 211

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 21/217 (9%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++ +  QK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRXQXXQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---------AERDVPEYIS 169
           RHVLVNGR ++I SYRCK  D+I  ++  K  A +  + Q            + VP +++
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE--KSRALIQNSFQNLFDLPSHKRKRKRVPYHLT 173

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +N         +I ++       + ++  LVVE+YSR
Sbjct: 174 LNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|32892094|gb|AAP88986.1| ribosomal protein S4 [Passiflora sidifolia]
          Length = 183

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-VTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDST---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|63101083|gb|AAY33166.1| small ribosomal protein 4 [Amblytropis hispidula]
          Length = 193

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGTLPGLTNKIPELKSSS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH++VN   V+
Sbjct: 57  LLNYVRIAKKAKGSTGEVLLQLLEMRLDNXIFRLGMAPTIPGARQLVNHRHIVVNDYIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNQQKSEAIISKNIEFYQKIKIPNHLTYNFIEKKGLINQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|66866245|gb|AAY57791.1| small ribosomal protein 4 [Rhacocarpus purpurascens]
          Length = 200

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 13/205 (6%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L+N R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVR 181
           V+I SYRCK  D I VK + K  A +         D      +P +++ N         +
Sbjct: 117 VDIPSYRCKPQDFITVKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYNSLKKKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRELIGLKINELLVVEYYSR 198


>gi|63101067|gb|AAY33158.1| small ribosomal protein 4 [Jaegerina scariosa]
          Length = 191

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+          +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTSQLKSGS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYQCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|222139880|ref|YP_002519947.1| ribosomal protein S4 [Ephedra equisetina]
 gi|220983548|dbj|BAH11315.1| ribosomal protein S4 [Ephedra equisetina]
          Length = 209

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 14/212 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMK 59
           MS+    + KI RR+        K P   +     +H   R   K S + + L+ KQK++
Sbjct: 4   MSRYLGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIR 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +YG ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHR
Sbjct: 60  FHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDN 174
           H+LVN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N   
Sbjct: 119 HILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQ 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 +I  +       + ++  LV+E+YSR
Sbjct: 179 NKGIVNKIIDTKD---LQLKIKEMLVIEYYSR 207


>gi|67035752|gb|AAY62807.1| small ribosomal protein subunit 4 [Zygodon bartramioides]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNHRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDLITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 REFIGLKINELLVVEYYSR 192


>gi|268609565|ref|ZP_06143292.1| small subunit ribosomal protein S4 [Ruminococcus flavefaciens FD-1]
          Length = 199

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 110/209 (52%), Gaps = 13/209 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+ ++    K  R +G +    G  K                 + K S +GLQL+ KQK+
Sbjct: 1   MAVQKEPILKKCRYLGISPAVMGVSKKESIRFKNA------NNRKKISEYGLQLKEKQKL 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + EK+FR  F  A++  G    NLI+ LESRLD++VYR     T   ARQ V H
Sbjct: 55  KFIYGVL-EKQFRHYFAIAEKMEGKAGDNLITVLESRLDSVVYRMGLALTRREARQLVVH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVA 177
            H  VNG+ VNI SYR K GDVI +K+K +          +  +R VP +++ N D+  A
Sbjct: 114 SHYTVNGKKVNIPSYRVKVGDVIALKEKDRTSEKFKATVEETKDRLVPVWLTANKDDFSA 173

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           T  R+PS  +D+ Y V    +L+VE YS+
Sbjct: 174 TVNRLPS-AEDIDYEVAT--HLIVELYSK 199


>gi|75858251|gb|ABA28699.1| small ribosomal protein 4 [Lycopodium clavatum]
          Length = 190

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+GE      K+P     Y    +      K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGELPGLTHKTPKLKPDYS---NQSTSSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R++N+ S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRAINVPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I  + +S+    + + +++++   +P +++++         +I         
Sbjct: 117 YRCKPKDIITTRDRSESRTIIAKNNKISQTYKIPNHLTLHSLQNKGLVNKIIDR---ESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLNINELLVVEYYSR 188


>gi|111283704|gb|ABH09202.1| small ribosomal protein 4 [Goebelobryum unguiculatum]
          Length = 188

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+     SY   +       K S + ++L  KQK++ ++G +
Sbjct: 1   GPRVKIIRRLGALPGLTGKTLRPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHHG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A  ++G T   L+   E RLD  ++R     TI  ARQ VNHRH+L+N 
Sbjct: 57  TERQLLKYVRIARGAKGSTGQVLLQLFEMRLDNTIFRLGMASTIPEARQLVNHRHILINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD I VK + K  + ++    L ++  +P +++++   +     +  +
Sbjct: 117 NIVDIPSYNCEPGDTITVKTEQKSQSMIIRNINLFQKSKIPSHLTLDAAGLRGFVNQTIN 176

Query: 185 SLKDVPYPVIMQPNL 199
                   + +   L
Sbjct: 177 R---EWIDLKINELL 188


>gi|7576575|gb|AAF63900.1| ribosomal protein system 4 [Isopterygium tenerum]
          Length = 190

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 3   RLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V+I SY
Sbjct: 59  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D+I +K + K    + +  +  ++  +P +++ N         +I          
Sbjct: 119 RCKPHDLITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQIIDR---ESIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|67035951|gb|AAY62902.1| small ribosomal protein subunit 4 [Neckera pennata]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +L ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|307694124|ref|ZP_07636361.1| 30S ribosomal protein S4 [Ruminococcaceae bacterium D16]
          Length = 200

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++      K  + +  +    G  K   N         GQ R+ +  Y  +QL  KQK+
Sbjct: 1   MARNMQPIAKRCKALNLSPAAMGYAKKTTNRNPK-----GQMRRKQSEY-AMQLTEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG I EK+F   +++A R  G T  NL++ +E RLD +VYR  F  T   ARQ V H
Sbjct: 55  KFVYG-IMEKQFHMYYEKATRMPGKTGENLLTLIERRLDNVVYRLGFAMTRREARQLVTH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS--QLAERDVPEYISVNHDNMV 176
            H  VNG+ V+I S+  K GDVIEV++KS+                +VP+++    + + 
Sbjct: 114 GHFTVNGQRVDIPSFLVKVGDVIEVREKSRSSVKFKRLLGEDAPVVNVPKWLDHAKNTLQ 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              V +P    D+ +PV  + +L+VE YS+
Sbjct: 174 GKVVALPVR-DDIDFPV--EEHLIVELYSK 200


>gi|11228637|gb|AAG33104.1| small ribosomal protein 4 [Dicranum scoparium]
 gi|20531107|gb|AAM27374.1| ribosomal protein 4 [Dicranum scoparium]
          Length = 191

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+ ++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITGRQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I ++ + K  A +++    +++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|15145842|gb|AAK83539.1| rps4 [Tayloria serrata var. tenuis]
          Length = 189

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTSKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L+N R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILINDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576603|gb|AAF63914.1| ribosomal protein system 4 [Papillaria nigrescens]
          Length = 190

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|12330518|gb|AAG52796.1| ribosomal protein 4 [Scopelophila cataractae]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VBI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVLFRLGIAPTIPGARQLVNHRHILVNNRLVBIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK  D I +K + K  A + +     ++  +P +++ N         +I   L      
Sbjct: 117 CCKPQDFITIKDRQKSQALITKHIDFYQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|67036122|gb|AAY62987.1| small ribosomal protein subunit 4 [Taxiphyllopsis iwatsukii]
          Length = 192

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K K K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKSQDFITIKNKRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|63078568|gb|AAY29371.1| ribosomal protein S4 [Chionoloma bombayense]
          Length = 192

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLSNKTPHLKSSS---TNQSNSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R +NI
Sbjct: 57  LNYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIINI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 LIGLKINELLVVEYYSR 190


>gi|12330532|gb|AAG52803.1| ribosomal protein 4 [Conostomum tetragonum]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|28194679|gb|AAO33601.1|AF480956_1 ribosomal protein S4 [Aloina ambigua]
          Length = 195

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P   R      +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLSNKIP---RLKSSSTNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DQESIGLKINELLVVEYYSR 193


>gi|59803316|gb|AAX07766.1| Rps4 [Riccardia capillacea]
          Length = 201

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S     + KI RR+G +     + P +  SY   +       K S + L+L  KQK++ +
Sbjct: 1   SVYRGPRTKIIRRLGVSPGLTSRIPKSRSSY---IDRSAPNKKISQYRLRLEEKQKLRFH 57

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           +G ++EK+  +    A +++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV
Sbjct: 58  HG-VTEKQLLNYVCVAKKAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHV 116

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATFV 180
           L+N   V+I SY CK GD+I +K + +    +      + +  +P +++    +   +  
Sbjct: 117 LINANMVDIPSYNCKTGDIITIKNRVRNQLELESNRISVQKPGIPNHLAFESIDFRGSVN 176

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R           + +   LVVE+YSR
Sbjct: 177 RTIDR---EGIDLKINELLVVEYYSR 199


>gi|187763094|ref|YP_001876569.1| ribosomal protein S4 [Welwitschia mirabilis]
 gi|254809472|sp|B2Y1V2|RR4_WELMI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|163311624|gb|ABY26782.1| ribosomal protein S4 [Welwitschia mirabilis]
 gi|220983467|dbj|BAH11236.1| ribosomal protein S4 [Welwitschia mirabilis]
          Length = 201

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P   +         R   K S   + L+ KQK++ 
Sbjct: 1   MSRYLGPRFKIIRRLKTLPGLTSKRPKYKKRVR--RRFSRPWWKKSQHLICLQEKQKIRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++ R     A R++G T   L+  LE RLD I+++     TI AARQ VNHRH
Sbjct: 59  HYG-LTERQLRQYINIAKRAQGSTGQVLLQLLEMRLDNIIFQLGIARTIPAARQIVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERDVPEYISVNHDNMVAT 178
           VLVNGR V+I SYRCK  DV+ +K K+ +     + +      R VP +++++       
Sbjct: 118 VLVNGRVVDIPSYRCKPQDVLTIKTKNPEELRTIINKNRSKFRRKVPYHLTLDLAQNKGI 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFY 204
             +I          + +Q  LV+E+Y
Sbjct: 178 VNKIIDRKD---IQLKIQEMLVIEYY 200


>gi|7109197|gb|AAF36674.1| ribosomal protein 4 [Uleastrum paraguense]
 gi|67035650|gb|AAY62756.1| small ribosomal protein subunit 4 [Uleastrum paraguense]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K    ++     +       K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGPLPGLTNK---ISKLKSGSISQPTSNKKISQYRIRLEXKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    +++    +++  VP +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQTMIIKNLDFSQKIKVPNHLTFNSLEKKGLVNQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|78102725|gb|ABB21576.1| small ribosomal protein 4 [Plagiochila validissima]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWINLKINELLVV 188


>gi|37992689|gb|AAR06523.1| small ribosomal protein 4 [Squamidium nigricans]
          Length = 192

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D + +K + K    + +  +  ++  +P +++           +I   L   
Sbjct: 117 PSYRCKPQDFVTMKNQRKSETIINKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|15145838|gb|AAK83537.1| rps4 [Tayloria grandis (D.G.Long) Goffinet & A.J.Shaw, 2002]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRLKSQALINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576757|gb|AAF63975.1| small ribosomal protein 4 [Dawsonia papuana]
          Length = 191

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTSQLKSGY---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI 
Sbjct: 57  NYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    +++    +++  +P ++  NH        +I   L    
Sbjct: 117 SYRCKPQDSITIKNRQKSQNIIVKNIDFSQKYKIPNHLIFNHLERKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|118577538|gb|ABL07135.1| small ribosomal protein 4 [Peperomia congesta]
          Length = 184

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K PV+  S    L  Q R  K S + ++L  KQK++ +YG + E++     + A
Sbjct: 1   LPGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNG  V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  +   K    V  +   A R ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTRNAQKSKILVQNSMDSASREELPKHLTLDSSQYKGIVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|16565382|gb|AAL26206.1|AF313605_1 small ribosomal protein 4 [Huperzia lucidula]
          Length = 192

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+GE      K+P     Y   ++      K S + ++L  KQK++ ++G ++E++ 
Sbjct: 1   IIRRLGELPGLTRKTPKXKPDY---INKSTPNKKVSQYCIRLEEKQKLRFHHG-LAEQQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R++N+
Sbjct: 57  LKYVRIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRAINV 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D+I  + + +  A + +  + ++   +P +++++    V    +I       
Sbjct: 117 PSYRCKPKDIITTRDRPESRARITKNYEFSQTYKIPNHLTLHSLQSVGLVNKIVDR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIDLNINELLVVEYYSR 190


>gi|78102705|gb|ABB21566.1| small ribosomal protein 4 [Plagiochila pachyloma]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKALKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  A Q VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGAXQXVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C  GD+I V+ + K  + V +     ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCXPGDIITVRNEQKSQSXVTKNINSFQKLKMPSHLTFDSTQLRGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|28194767|gb|AAO33645.1|AF481000_1 ribosomal protein S4 [Tortula subulata]
          Length = 194

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S            K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLSNKIPHLKSSS---TTQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +     ++  +P +++ N+        +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKDRKKSQVMITKNVDFYQKSKIPNHLTFNYLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|16565365|gb|AAL26201.1|AF313594_1 small ribosomal protein 4 [Ophioglossum reticulatum]
          Length = 194

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 12/200 (6%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+G NL G  K    +   G      ++    S + ++L AKQ+++  YG ++E++ 
Sbjct: 1   LIRRLG-NLPGLTKKSPKSEGIGSDQPVSKK---ISQYCIRLEAKQRLRLNYG-LTERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R+RG T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN R V++
Sbjct: 56  LKYVRIARRARGSTGQVSLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDRVVDV 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVN---HDNMVATFVRIPSSL 186
            SY C   D+I V+ +      + +  + + E ++P ++S++    D +     RI    
Sbjct: 116 PSYCCGPNDIITVRDRKNSQDLIRKNMESSYESEIPNHLSLSLSKSDKLKGFVNRIIDR- 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   L+VE+YSR
Sbjct: 175 --ESIGLEVNELLIVEYYSR 192


>gi|32892110|gb|AAP88994.1| ribosomal protein S4 [Passiflora incarnata]
          Length = 183

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLHSFPQEKLPKHLTLHPFQYKGLVNQIIDST---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|160415808|gb|ABX39211.1| small ribosomal protein 4 [Niphotrichum elongatum]
          Length = 188

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|47606936|gb|AAT36388.1| ribosomal protein subunit 4 [Pyrrhobryum paramattense]
          Length = 194

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P  T S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLTSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLSQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDQEKYQTIISKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESISLKINELLVVEYYSR 192


>gi|63191789|gb|AAY34854.1| small ribosomal protein subunit 4 [Tetraphis pellucida]
          Length = 190

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++   
Sbjct: 1   RRLGVLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +    +++  +P ++++N         ++   L     
Sbjct: 117 YRCKPQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LDREFI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLKINELLVVEYYSR 188


>gi|50235340|gb|AAT70703.1| Rps4 [Clasmatodon parvulus]
          Length = 195

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D + +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|328488188|gb|AEB19907.1| small ribosomal protein 4 [Schistochila gayana]
          Length = 191

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRSGILPGLTSKTLKPKSSY---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + ++    L  +  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKQKSQSMIIRNLDLLHKLKIPNHLTFDSTQLQGLVSQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|12330480|gb|AAG52777.1| ribosomal protein 4 [Aplodon wormskioldii]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V+I SY
Sbjct: 57  VRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQTIISKNIEFYQKYKIPNHLTFNSLQKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576653|gb|AAF63939.1| ribosomal protein system 4 [Prionodon densus]
          Length = 189

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNIIFRFGMASTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQPKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|49182696|gb|AAT57810.1| small ribosomal protein [Cyclolejeunea convexistipa]
          Length = 192

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+G       K           L       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKVIRRLGSLPGLTRKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTE 53

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++      TI  ARQ VNHRH+ +N   
Sbjct: 54  RQLLKFVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPNARQLVNHRHIFINDYI 113

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +     
Sbjct: 114 VNIPSYNCKPGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDLTQLRGLVNQTIRR- 172

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 173 --EWIDLKINELLVVEYYSR 190


>gi|74273163|gb|ABA01281.1| ribosomal protein S4 [Passiflora trisecta]
          Length = 183

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +S    +  +P++++ +         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSSDSFPQEKLPKHLTFHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|63191865|gb|AAY34892.1| small ribosomal protein subunit 4 [Tetrapterum recurvirostre]
          Length = 191

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +    +++  +P +++ N         +I        
Sbjct: 117 SYRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---SDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|328488158|gb|AEB19892.1| small ribosomal protein 4 [Pachyschistochila colensoana]
          Length = 191

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P ++  +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNINLLQKLKIPNHLIFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|118577571|gb|ABL07151.1| small ribosomal protein 4 [Piper divaricatum]
          Length = 187

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P   RS G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRP---RSEGS-LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYR
Sbjct: 56  RIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  + + +    V  +   A R ++P++++++         +I  S       +
Sbjct: 116 CKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|37992581|gb|AAR06469.1| small ribosomal protein 4 [Leskeodon auratus]
          Length = 194

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G  L G     +  +S         +K   S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGV-LPGLTNKILQLKSNSINQSASNKK--ISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63191821|gb|AAY34870.1| small ribosomal protein subunit 4 [Crossidium crassinerve]
          Length = 194

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|49182760|gb|AAT57842.1| small ribosomal protein [Metzgeria sp. Davis 361]
          Length = 195

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 8/198 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K   +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKIFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I +K +    + ++E     ++  +P +++ +   M+ +  +I    
Sbjct: 117 VDIPSYNCKPGDIITIKNQKIYRSIIMETLNSIQKPGIPNHLAFDSTKMIGSVNQIIHR- 175

Query: 187 KDVPYPVIMQPNLVVEFY 204
                 + +   LVVE+Y
Sbjct: 176 --EWIDLKINELLVVEYY 191


>gi|42718082|gb|AAS38463.1| rps4 [Tayloria acuminata]
          Length = 189

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|42556392|gb|AAS19791.1| small ribosomal protein 4 [Austrolejeunea nudipes]
          Length = 188

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K           L       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTSKISKTK------LDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++      TI  ARQ VNH+H+ +N   VNI 
Sbjct: 54  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFSLGMATTIPNARQLVNHKHIFINNYIVNIP 113

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +         
Sbjct: 114 SYNCKPGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDSTQLRGLINQTIRR---EW 170

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 171 IDLKINELLVVEYYSR 186


>gi|63100985|gb|AAY33117.1| small ribosomal protein 4 [Foreauella orthothecia]
          Length = 192

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       ++P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNRTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDQQKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|153805598|ref|YP_001382179.1| ribosomal protein S4 [Leptosira terrestris]
 gi|171704565|sp|A6YGA2|RR4_LEPTE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|134270129|gb|ABO69318.1| ribosomal protein S4 [Leptosira terrestris]
          Length = 221

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 23/224 (10%)

Query: 1   MSKRESSKHKIDRR--IGENLWGRPKSPVNTRSYGPGLHGQRRKSKP---------SYFG 49
           MS+   ++ +I R+  + + L G  +   + R   PG H ++R             + + 
Sbjct: 1   MSRYRGARLRIVRQFDLKQTLRGLTRKRTDNRCM-PGQHRKKRNDSTKKTKNSKKVAQYQ 59

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++L+ KQK++  YG I+E +  +  ++A +++G T   L+  LE RLD IV+R    PTI
Sbjct: 60  IRLQEKQKLRFNYG-ITESQLINYVRQARKTKGSTGETLLQLLEMRLDNIVFRLGMAPTI 118

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-------ER 162
            AARQ VNH H++VN + V+I SY+C+  DVI V +       +                
Sbjct: 119 PAARQLVNHGHIVVNNKKVDISSYQCQSQDVISVTKNKTIRTLISNFINSKTPKNLLRNP 178

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P ++  N   ++ T   +          + ++  L+VEFYSR
Sbjct: 179 QIPSHLIFNKSTLLGTIKSVVPRR---WIGLKIKELLIVEFYSR 219


>gi|42718080|gb|AAS38462.1| rps4 [Tayloria kilimandscharica]
          Length = 189

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|42556474|gb|AAS19832.1| small ribosomal protein 4 [Pallavicinia sp. He-Nygren 1407]
          Length = 191

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G  L G     + +RS            K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGA-LPGLSHKMLGSRSGYTNQ--LTTGKKISQYRIRLEEKQKLRFHYG-LTERQLV 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RLD IV+R    PTI +ARQ VNHRH+L+N  +VNI 
Sbjct: 57  KYVRIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPSARQLVNHRHILINANTVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK  D+I +K + +  + + +   L+ E+ +P +++ +      +  RI        
Sbjct: 117 SYNCKTKDIITIKNRHESQSLITKNINLSREQRIPNHLTFDSTRFCGSVNRITDR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|157689570|gb|ABV65341.1| ribosomal protein S4 [Tapiscia sinensis]
          Length = 186

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRP----RAGSDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K + K  A +      +   ++P+++ ++         +I          + 
Sbjct: 116 KPRDIITAKDEQKSRALIKNYLDSSTHEELPKHLILHTFQYKGLVNQIIDRK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|42718078|gb|AAS38461.1| rps4 [Tayloria scabriseta]
          Length = 189

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRVKSQAIINKNIEFNQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|33413215|emb|CAD86742.1| ribosomal protein small subunit 4 [Ditrichum pusillum]
          Length = 190

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N R VNI S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +    +++  VP +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQKSRAMISKNVDFSQKSKVPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|32892080|gb|AAP88979.1| ribosomal protein S4 [Passiflora foetida]
 gi|32892084|gb|AAP88981.1| ribosomal protein S4 [Passiflora speciosa]
 gi|32892118|gb|AAP88998.1| ribosomal protein S4 [Passiflora recurva]
 gi|32892140|gb|AAP89009.1| ribosomal protein S4 [Passiflora maliformis]
 gi|74273153|gb|ABA01276.1| ribosomal protein S4 [Passiflora coccinea]
 gi|74273155|gb|ABA01277.1| ribosomal protein S4 [Passiflora vitifolia]
 gi|74273159|gb|ABA01279.1| ribosomal protein S4 [Passiflora palmeri]
 gi|74273161|gb|ABA01280.1| ribosomal protein S4 [Passiflora antioquiensis]
 gi|74273165|gb|ABA01282.1| ribosomal protein S4 [Passiflora manicata]
 gi|74273171|gb|ABA01285.1| ribosomal protein S4 [Passiflora ambigua]
 gi|74273189|gb|ABA01294.1| ribosomal protein S4 [Passiflora riparia]
 gi|74273193|gb|ABA01296.1| ribosomal protein S4 [Passiflora serratodigitata]
 gi|74273197|gb|ABA01298.1| ribosomal protein S4 [Passiflora trintae]
 gi|74273211|gb|ABA01305.1| ribosomal protein S4 [Passiflora mixta]
 gi|74273213|gb|ABA01306.1| ribosomal protein S4 [Passiflora tripartita]
 gi|74273215|gb|ABA01307.1| ribosomal protein S4 [Passiflora trifoliata]
 gi|74273217|gb|ABA01308.1| ribosomal protein S4 [Passiflora luetzelburgii]
 gi|89031436|gb|ABD59455.1| Rps4 [Passiflora incarnata]
 gi|89031438|gb|ABD59456.1| Rps4 [Passiflora cincinnata x Passiflora incarnata]
 gi|89031440|gb|ABD59457.1| Rps4 [Passiflora cincinnata]
 gi|89031442|gb|ABD59458.1| Rps4 [Passiflora foetida x Passiflora palmeri]
 gi|89031444|gb|ABD59459.1| Rps4 [Passiflora foetida]
 gi|91795201|gb|ABE60881.1| ribosomal protein S4 [Passiflora hatschbachii]
          Length = 183

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|15145850|gb|AAK83543.1| rps4 [Tayloria solitaria]
          Length = 189

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFINIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|146261589|gb|ABQ15104.1| ribosomal protein S4 [Saxifraga stolonifera]
          Length = 186

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  DVI  K + K    +  +   +   +VP+Y++++         +I  +       + 
Sbjct: 116 KSRDVITAKDEQKSRTLIQNSLDSSPHEEVPKYLTLHPLQYKGLVNQIIDNK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|254383598|ref|ZP_04998948.1| 30S ribosomal protein S4 [Streptomyces sp. Mg1]
 gi|194342493|gb|EDX23459.1| 30S ribosomal protein S4 [Streptomyces sp. Mg1]
          Length = 203

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++  Y  IS
Sbjct: 6   PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRAQYD-IS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H+ VNG 
Sbjct: 64  ERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRSGIARTIYQARQMVVHGHIEVNGD 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183
            V+  S+R +  DVI V+++S++      A +     E + P Y+ VN   +     R P
Sbjct: 124 KVDKPSFRVRPDDVITVRERSREKVPFQVAREGGYAGEGETPRYLQVNLKALAFRLDRDP 183

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +  +    PVI    LVVE+Y+R
Sbjct: 184 NRKE---IPVICDEQLVVEYYAR 203


>gi|15145848|gb|AAK83542.1| rps4 [Tayloria rudolphiana]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|74273103|gb|ABA01251.1| ribosomal protein S4 [Passiflora ceratocarpa]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K GD+I VK + K    +  +     ++ +P++++++      +  +I  S       + 
Sbjct: 113 KPGDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLHRSQYKGSVNKIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|78102703|gb|ABB21565.1| small ribosomal protein 4 [Plagiochila oresitropha]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ N   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|293633973|gb|ADE60366.1| ribosomal protein subunit 4 [Atrichum flavisetum]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQEFQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LEINELLVVEYYSR 187


>gi|291302390|ref|YP_003513668.1| 30S ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728]
 gi|290571610|gb|ADD44575.1| ribosomal protein S4 [Stackebrandtia nassauensis DSM 44728]
          Length = 203

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 9/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    K K  R +G  L  +       R + PG HG+RR+S+  Y   +L  KQ++++
Sbjct: 1   MNRPR-PKAKRSRALGIALTPKCVKYFERRPFPPGQHGRRRRSESDYSR-RLLEKQRLRE 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y +I E + +  F EA R  G T  NL+S LE RLD  V RA F  TI+ +RQ V HRH
Sbjct: 59  QY-NIREAQMKRAFAEAVRRDGKTGDNLVSLLERRLDAFVLRAGFARTIYQSRQQVVHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVA 177
            LVNGR V+  SYR K GDV++V   S+           +      +P Y+      + A
Sbjct: 118 FLVNGRRVDKPSYRLKPGDVVQVAPGSRDKTPFQLAAAGAWAGSGPLPGYLEAKLPELKA 177

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  P   +    PV+    LVVEFYSR
Sbjct: 178 RLIAEPPRAQ---VPVVCDEQLVVEFYSR 203


>gi|254525444|ref|ZP_05137496.1| ribosomal protein S4 [Prochlorococcus marinus str. MIT 9202]
 gi|221536868|gb|EEE39321.1| ribosomal protein S4 [Prochlorococcus marinus str. MIT 9202]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +GE      K+    +S  PG HGQ R+ +  Y  ++L  KQK++  YG +SEK+     
Sbjct: 1   MGELPGLTRKAS--KKSNPPGQHGQARRKRSEY-AIRLEEKQKLRFNYG-VSEKQLVRYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           K+A    G T  NL+  LE+RLD + +R  F  TI  +RQ VNH HV VNG+ ++I  Y+
Sbjct: 57  KKARAQEGSTGTNLLRLLENRLDNVCFRLGFGGTIPGSRQLVNHGHVTVNGKVLDIAGYQ 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK GDVI +K+       V    +     +VP ++ ++   +                 +
Sbjct: 117 CKSGDVIGIKENKASKKLVEGNIEFPGLANVPPHLDLDKPKLTGKIN---GKCDREWVAL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 EINELLVVEYYSR 186


>gi|32401820|gb|AAP80898.1| small ribosomal protein 4 [Eucalyptus globulus]
          Length = 184

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  +   K  A +      +   +VP++++++         +I  S       + + 
Sbjct: 116 RDIITARDDQKSRAMIQNYFDSSPPEEVPKHLTLHPFQYKGLVNQIIDSK---WIGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|49182714|gb|AAT57819.1| small ribosomal protein [Haplomitrium gibbsiae]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P   +    G        K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGSLPGLTNKAP---KPRPGGTDQSIANKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+L+N ++V+I S 
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVISRLGMAPTIPGARQLVNHRHILLNDKTVDIPSC 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            C+ GD+I V+ ++     + E +  ++R   P +++++    +    +I          
Sbjct: 117 NCEPGDIITVRDRAGSRPVIAEGTDPSQRSRTPNHLNLDSARNMGFVNQIIDR---EWIS 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37548827|gb|AAO32682.1| ribosomal protein 4 [Buxbaumia aphylla]
          Length = 193

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P     Y    +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 3   IRRLGALPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  ++G T    +   E RLD I++R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 59  KYVRIARGAKGSTGQISLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNNIVNIP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K   K    + +  +L+++  +P +++ N         +I   L    
Sbjct: 119 SYRCKPQDFITIKNSQKSQTIITKNIELSQKYKIPNHLTFNSLEKKGLVNQI---LDRES 175

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 176 IGLKINELLVVEYYSR 191


>gi|67035931|gb|AAY62892.1| small ribosomal protein subunit 4 [Mesonodon flavescens]
          Length = 194

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+L+N   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILINDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|157689524|gb|ABV65318.1| ribosomal protein S4 [Myrtus communis]
          Length = 185

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK
Sbjct: 56  AGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  +   K    +      +   ++P++++++         +I  S       + +
Sbjct: 116 PRDIITARDDQKSRTMIQNFLDSSPHEEMPKHLTLHPFQYKGLVNQIIDSK---WIGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|49182785|gb|AAT57854.1| small ribosomal protein [Ptilidium ciliare]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K      SY   +       K S++ ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTGKILKPKSSY---IDRSTSNKKVSHYRIRLEEKQKLRFHYG-LTERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +VNI SY 
Sbjct: 57  CIARKAKGSTGQILLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVNIPSYN 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK GD+I ++ + K  + +     L ++  +P +++ +   +  +  ++          +
Sbjct: 117 CKPGDMITIRNREKSQSIITRNINLFQKLKIPNHLTFDLTQLRGSVNQMIHR---EWIHL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|50235334|gb|AAT70700.1| Rps4 [Lescuraea mutabilis]
          Length = 195

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +  RR+G       ++P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRXIRRLGTLPGLTNRTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67035724|gb|AAY62793.1| small ribosomal protein subunit 4 [Luisierella barbula]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLSGLTTKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  D I +K + K  A + +  ++ ++  +P +++ N         +I   L     
Sbjct: 117 YCCKTQDFITIKNRQKSQAIINKNIEIYQKYKLPNHLTFNSLQKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|67035843|gb|AAY62848.1| small ribosomal protein subunit 4 [Donnellia commutata]
          Length = 194

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGXILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|32892136|gb|AAP89007.1| ribosomal protein S4 [Passiflora gabrielliana]
 gi|91795199|gb|ABE60880.1| ribosomal protein S4 [Passiflora cerasina]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSTF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|3098244|gb|AAC15570.1| small ribosomal protein 4 [Hymenodontopsis vallis-gratiae]
 gi|47606940|gb|AAT36390.1| ribosomal protein subunit 4 [Hymenodontopsis vallis-gratiae]
          Length = 195

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKIPQLRSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K + K  A + +     ++  +P +++ ++        +I    
Sbjct: 117 VNIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYSYLEKKGFVNQILDRK 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 177 ---SIGLKINELLVVEYYSR 193


>gi|325261520|ref|ZP_08128258.1| ribosomal protein S4 [Clostridium sp. D5]
 gi|324032974|gb|EGB94251.1| ribosomal protein S4 [Clostridium sp. D5]
          Length = 197

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+    +  K  R +G +      +  + R        +R   K S +GLQLR KQK K 
Sbjct: 1   MAVNRVAVLKRCRSLGMDPIYLGINKKSNRQL------KRSNRKMSEYGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A +  G T  NL+  LESRLD +++R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKAKKMEGMTGENLMILLESRLDNVMFRMGLARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           V+VNG+ VNI SY  K GD IE+K+K K      +  ++   + +P+++ V+ +N+ AT 
Sbjct: 114 VMVNGKQVNIPSYLVKAGDTIEIKEKHKGSQRYKDILEMTGGNMIPDWLEVDAENLKATV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPAR---EAIDVPVDEMLIVELYSK 197


>gi|12330464|gb|AAG52769.1| ribosomal protein 4 [Polytrichastrum pallidisetum]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG  +E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGY---INQAVSNKKISXYRIRLEEKQKLRFHYGX-TERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD  ++R    PTI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNXIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|3098206|gb|AAC15551.1| small ribosomal protein 4 [Amblyodon dealbatus]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P  T S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLTSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|63191837|gb|AAY34878.1| small ribosomal protein subunit 4 [Leptodontium luteum]
          Length = 191

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    +     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +  + K  + + +    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDCITINDRQKSQSIITKNIDFSQKSKIPHHLAFNSLEKKGLINQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|7576547|gb|AAF63886.1| ribosomal protein system 4 [Anomodon rugelii]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQSLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|293634123|gb|ADE60441.1| ribosomal protein subunit 4 [Polytrichum hyperboreum]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A +      +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|11121335|emb|CAC14831.1| ribosomal protein subunit 4 [Racopilum tomentosum]
          Length = 192

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHRHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A   +     ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQKSQAITSKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIDLKINELLVVEYYSR 190


>gi|67036062|gb|AAY62957.1| small ribosomal protein subunit 4 [Plagiothecium cavifolium]
          Length = 192

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L   LE R D +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLSQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|63191728|gb|AAY34824.1| small ribosomal protein subunit 4 [Plagiopus oederi]
          Length = 192

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRMVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K  A + +     ++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              +     LVVE+YSR
Sbjct: 174 SIGLKTNELLVVEYYSR 190


>gi|63191771|gb|AAY34845.1| small ribosomal protein subunit 4 [Meiotrichum lyallii]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A +      +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|7576549|gb|AAF63887.1| ribosomal protein system 4 [Thelia lescurii]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETVISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|184127935|gb|ACC67867.1| ribosomal protein small subunit 4 [Christensenia aesculifolia]
          Length = 200

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+ +      K+  + ++       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLRIIRRLKDLPGLTNKTLRSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PT  AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTTPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISV----NHDNMVATFVRI 182
           VNI SYRCK  D+I V+ ++     V +  +   +D +PE++++    +++       RI
Sbjct: 118 VNIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLDDNEKPQGFVNRI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 178 VTRD---SIGLNINELLVVEYYSR 198


>gi|37992565|gb|AAR06461.1| small ribosomal protein 4 [Camptochaete arbuscula]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    +       K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---IXXSXSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|32892090|gb|AAP88984.1| ribosomal protein S4 [Passiflora setacea]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEPKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|12330536|gb|AAG52805.1| ribosomal protein 4 [Leptobryum wilsonii]
 gi|42718116|gb|AAS38480.1| rps4 [Leptobryum wilsonii]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFIIIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|283549372|dbj|BAI66348.1| small ribosomal protein 4 [Eocalypogeia quelpartensis]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKPKSSY---IERSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A + +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRTARKVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNNI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I VK K K   +V +   L ++  +P +++ +   +     +  +  
Sbjct: 117 VDIPSYHCKPGDIITVKNKQKSRLTVTKNISLFQKLKIPSHLTFDSTELRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWIDLKINELLVV 188


>gi|302533389|ref|ZP_07285731.1| ribosomal protein S4 [Streptomyces sp. C]
 gi|302442284|gb|EFL14100.1| ribosomal protein S4 [Streptomyces sp. C]
          Length = 203

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++  Y  IS
Sbjct: 6   PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRAQYD-IS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++    +  A ++ G T   L+  LE RLD +V RA    TI+ ARQ V H H+ VNG 
Sbjct: 64  ERQMARAYDRAKKAEGKTGEALVVELERRLDALVLRAGIARTIYQARQMVVHGHIEVNGG 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183
            V+  S+R +  DVI V+++S++      A +     E + P Y+ VN   +     R P
Sbjct: 124 KVDKPSFRVRPDDVITVRERSREKHPFQVAREGGYAGEGETPRYLQVNLKALAFRLDRDP 183

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +  +    PVI    LVVE+Y+R
Sbjct: 184 NRKE---IPVICDEQLVVEYYAR 203


>gi|257067034|ref|YP_003153290.1| 30S ribosomal protein S4 [Anaerococcus prevotii DSM 20548]
 gi|256798914|gb|ACV29569.1| ribosomal protein S4 [Anaerococcus prevotii DSM 20548]
          Length = 197

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +   +K  R +G +      +  + R+         R+SK S +G+Q R KQK K 
Sbjct: 1   MAVSKDPVYKKARALGISPAYLGYTGESKRALP------NRRSKLSEYGMQQREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FR  ++ A + +G T   LI   E RLD I +R+    T   ARQ V H H
Sbjct: 55  IYG-VSEKQFRGYYEAASKMKGQTGEQLIILCERRLDNIAFRSGLARTRREARQIVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+  EGDVIEV++KS+         +  A   V E++S + +N+  T 
Sbjct: 114 LTVNGKQVDIPSYKVSEGDVIEVREKSRSNTLFKTIKETNATFGVVEWLSSDLENLKVTV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P+  +D+  PV  +  ++VEFYS+
Sbjct: 174 DRFPTR-EDIDIPV--EERMIVEFYSK 197


>gi|7576627|gb|AAF63926.1| ribosomal protein system 4 [Pseudocryphaea domingensis]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|293634025|gb|ADE60392.1| ribosomal protein subunit 4 [Pogonatum aloides]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDNIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           C   D I +K + +  A + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CXPXDFITIKNRQESQAIIAKNIDFSQKXKIPNHLTFNSLEKKGLVNQI---LDRESISL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|293634087|gb|ADE60423.1| ribosomal protein subunit 4 [Polytrichastrum longisetum]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A +      +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|302541108|ref|ZP_07293450.1| ribosomal protein S4 [Streptomyces hygroscopicus ATCC 53653]
 gi|302458726|gb|EFL21819.1| ribosomal protein S4 [Streptomyces himastatinicus ATCC 53653]
          Length = 203

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K K  R +G  L  +       R Y PG HG+ RK + S + ++L  KQ+++  Y  IS
Sbjct: 6   PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRK-QTSDYKVRLLEKQRLRAQYD-IS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++    +  A +  G T   LI  LE RLD +V R+    TI+ ARQ V H H+ VNGR
Sbjct: 64  ERQMARAYDRARKVDGKTGEALIIELERRLDALVLRSGIARTIYQARQMVVHGHIEVNGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183
            V+  S+R +  DV+ V+++S++      A +     + + P Y+ VN   +     R P
Sbjct: 124 KVDKPSFRVRPDDVVMVRERSREKHPFQVAREGGYAPDGETPRYLQVNLKALAFRLDRDP 183

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +  +    PVI    LVVE+Y+R
Sbjct: 184 NRKE---VPVICDEQLVVEYYAR 203


>gi|32892102|gb|AAP88990.1| ribosomal protein S4 [Passiflora cincinnata]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|11121111|emb|CAC14742.1| ribosomal protein subunit 4 [Bescherellia brevifolia]
          Length = 191

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIA 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|50235370|gb|AAT70718.1| Rps4 [Brachythecium dieckei]
          Length = 195

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR G       K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRXGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|74273157|gb|ABA01278.1| ribosomal protein S4 [Passiflora clathrata]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPLQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|78102675|gb|ABB21551.1| small ribosomal protein 4 [Plagiochila javanica]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINEXLVVE 189


>gi|37992477|gb|AAR06417.1| small ribosomal protein 4 [Cyathophorella hookeriana]
          Length = 194

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + +    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRESETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|328488184|gb|AEB19905.1| small ribosomal protein 4 [Schistochila ciliata]
          Length = 191

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMTTTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIITIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|74273187|gb|ABA01293.1| ribosomal protein S4 [Passiflora odontophylla]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTNKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVC 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|42405298|gb|AAS13475.1| rps4 small ribosomal protein [Dichelodontium nitidum]
          Length = 195

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D I++R     TI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLLEMRSDNILFRLGMASTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I +K +      + +     ++  +P +++ +         +I   L
Sbjct: 117 VNIPSYRCKPQDFIIIKDEKNSEGVINKKEDFYQKYKIPNHLTYSFLEKKGLVNKI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|7576519|gb|AAF63872.1| ribosomal protein system 4 [Thamnobryum allegrense]
 gi|7576521|gb|AAF63873.1| ribosomal protein system 4 [Neckeropsis disticha]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|227345133|gb|ACP28119.1| small ribosomal protein 4 [Clasmatocolea ctenophylla]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K      SY   +       K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGALPGLTNKILKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY
Sbjct: 57  MRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            C+ GD+I ++ K K  + + +   L ++ ++P ++  +   +  +  ++ +        
Sbjct: 117 NCEPGDIIAIRNKHKSRSIITKNINLFQKLEIPSHLIFDSIKLRGSVNQMINR---EWIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|3098156|gb|AAC15526.1| small ribosomal protein 4 [Blindia acuta]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I E+   + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-IXERXLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D   +K + K  A V++    +++  VP +++ N         +I   L      
Sbjct: 117 RCKPQDFFTIKDRQKSQAMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|317501800|ref|ZP_07959986.1| ribosomal protein S4 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088679|ref|ZP_08337589.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896833|gb|EFV18918.1| ribosomal protein S4 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407202|gb|EGG86705.1| 30S ribosomal protein S4 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 197

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +        +N +S        R+ S+   +GLQLR KQK K 
Sbjct: 1   MAVNRVPVLKRCRSLGMDPIYLG---INKKSNRQLKRANRKMSE---YGLQLREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ + +A +  G T  NL+  LESRLD +++R     T   ARQ V+H+H
Sbjct: 55  IYGVL-EKPFRNYYAKAKQMEGMTGENLMRILESRLDNVIFRMGLARTRKEARQIVDHKH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           VLVNG+ VNI SY  K GD IE+K+  K      +  +    + VPE++ V+ +N+  + 
Sbjct: 114 VLVNGKQVNIPSYLVKAGDTIEIKENKKGSQRYKDILEATGSNMVPEWLDVDAENLKGSV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+        V +   L+VE YS+
Sbjct: 174 KELPAR---EAIDVPVDEMLIVELYSK 197


>gi|74273177|gb|ABA01288.1| ribosomal protein S4 [Passiflora ischnoclada]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     ++ +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQKKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|293634077|gb|ADE60418.1| ribosomal protein subunit 4 [Polytrichastrum alpinum]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A +      ++   +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|17025849|gb|AAL32090.1| ribosomal protein 4 [Mitthyridium sp. Wall 3685]
          Length = 199

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 5   RVKIIRRLGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTE 60

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +K  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 61  RKLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNM 120

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY+CK  D I +K + K    +++ ++ + +   P +++ N         +I   L
Sbjct: 121 VNIPSYQCKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPTHLTFNFVEKKGLVNQI---L 177

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 178 DQESIGLKINELLVVEYYSR 197


>gi|184127943|gb|ACC67871.1| ribosomal protein small subunit 4 [Marattia laevis]
          Length = 199

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+ +      K+  + ++       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIIFRLGMSPTIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183
           V+I SYRCK  D+I V+ +      V +  +   +D +PE+++++    +       RI 
Sbjct: 118 VDIPSYRCKPKDIISVRDQPNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197


>gi|157689578|gb|ABV65345.1| ribosomal protein S4 [Tropaeolum majus]
          Length = 186

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKKP----RVGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ +NHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLINHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I V+ + K  A +       A  ++P++++++         +I          + 
Sbjct: 116 KSRDIITVRNEQKSRALIQNFLDSSAHEELPKHLTLHTFQYEGLVNQIIDRK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|12642250|gb|AAK00207.1| rps4 [Ephemerum spinulosum]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    +     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKTPHVKSNS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YIRIARKTKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDCITIKDRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|12330506|gb|AAG52790.1| ribosomal protein 4 [Drummondia prorepens]
          Length = 189

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +    +++  VP +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|78369607|gb|ABB43033.1| ribosomal protein 4 [Syrrhopodon parasiticus]
          Length = 192

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGTLSGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY+CK  D I +K + K    +++ +   ++   P ++  N         +I   L   
Sbjct: 117 PSYQCKPQDFITIKDQQKYQTMIIKNTTFFSKHKTPNHLIFNSVEKKGFVNQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|307828379|gb|ADN94988.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI S
Sbjct: 57  YVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK GDVI V+ + K  + + +   L ++   P +++++   +  +  +          
Sbjct: 117 YSCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 NLKINELLVVEYYSR 188


>gi|42794716|gb|AAS45753.1| Rps4 [Thibaudia floribunda]
          Length = 211

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K    +  ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFGKKKKXQXH--IRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG +++++     +   +++G     L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTDRQLLKYVRIXGKAKGSPGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKQKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|32892100|gb|AAP88989.1| ribosomal protein S4 [Passiflora actinia]
          Length = 183

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-VTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|37992621|gb|AAR06489.1| small ribosomal protein 4 [Papillaria imponderosa]
 gi|37992633|gb|AAR06495.1| small ribosomal protein 4 [Papillaria nigrescens]
          Length = 190

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|32892142|gb|AAP89010.1| ribosomal protein S4 [Passiflora quadrangularis]
          Length = 183

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIAKSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  +E RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLIEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +    ++  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSFDSFSQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|29422391|gb|AAO84591.1| small ribosomal protein 4 [Breutelia arundinifolia]
          Length = 190

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGAXPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPXDFITIKDRXKSQXIISKNIDFYQKYXIPNHLTYNSXENKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|86438898|emb|CAJ55424.1| small ribosomal protein 4 [Plagiochila hookeriana]
          Length = 187

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++
Sbjct: 1   PRIKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  
Sbjct: 57  ERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINND 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  ++ + 
Sbjct: 117 IVDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR 176

Query: 186 LKDVPYPVIMQPNL 199
                  + +   L
Sbjct: 177 ---EWINLKINELL 187


>gi|78102669|gb|ABB21548.1| small ribosomal protein 4 [Plagiochila gymnoclada]
          Length = 189

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +   L ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNINLFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|49182704|gb|AAT57814.1| small ribosomal protein [Fossombronia pusilla]
          Length = 194

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++  
Sbjct: 4   IRRLGVLPGLTDRIVEPRSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI 
Sbjct: 60  KYVRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  +         
Sbjct: 120 SYSCKPGDVITVRNRQKSQSIIAKSMSLFQKPKTPNHLTLDLTRLRGSINQTIDRD---W 176

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 177 IDLKINELLVVEYYSR 192


>gi|32401826|gb|AAP80901.1| small ribosomal protein 4 [Cornus kousa]
          Length = 184

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + K  A +  + + +   ++P++++V+         +I  S       + + 
Sbjct: 116 QDIITARDEQKSRALIQNSLESSPHEELPKHLTVHPFQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|297155790|gb|ADI05502.1| 30S ribosomal protein S4 [Streptomyces bingchenggensis BCW-1]
          Length = 204

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +      TR Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFETRPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  ISE++    +  A ++ G T   L+  LE RLD +V R+    TI+ ARQ V H H
Sbjct: 60  QYD-ISERQMARAYDRARKAEGKTGEALVIELERRLDALVLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           + VNGR V+  S+R +  DV+ V+++S+       A +     + + P Y+ VN   +  
Sbjct: 119 IEVNGRKVDKPSFRVRPDDVVMVRERSRDKHPFQVAREGGYALDGETPRYLQVNLLALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R P+  +    PVI    LVVE+Y+R
Sbjct: 179 RLDRDPNRKE---IPVICDEQLVVEYYAR 204


>gi|160415786|gb|ABX39200.1| small ribosomal protein 4 [Dryptodon decipiens]
          Length = 188

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  + +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|7576537|gb|AAF63881.1| ribosomal protein system 4 [Myurium hochstetteri]
          Length = 189

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|118577540|gb|ABL07136.1| small ribosomal protein 4 [Peperomia dolabriformis]
          Length = 183

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K PV+  S    L  Q R  K S + ++L  KQK++ +YG + E++     + A 
Sbjct: 1   PGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNG  V+I SYRCK  
Sbjct: 56  KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  +   K    V  +   A R ++P++++++         +I  +       + +  
Sbjct: 116 DIITTRNAQKSKILVQNSMDSASREELPKHLTLDSSQYKGIVNQIIDNK---WVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|32892108|gb|AAP88993.1| ribosomal protein S4 [Passiflora elegans]
          Length = 183

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSTF-------SRSGKKSQYCIRLEEKQKLRFHYG-VTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|293634071|gb|ADE60415.1| ribosomal protein subunit 4 [Polytrichadelphus purpureus]
          Length = 188

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 7/192 (3%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y        +K   S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGYINQQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 57

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 58  IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRC 117

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A ++     +++  +P +++ N         +I   L      + 
Sbjct: 118 KPQDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 174

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 175 INELLVVEYYSR 186


>gi|50235364|gb|AAT70715.1| Rps4 [Brachytheciastrum fendleri]
          Length = 190

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|50235358|gb|AAT70712.1| Rps4 [Scleropodium cespitans]
          Length = 195

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+        K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLXTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42794724|gb|AAS45757.1| Rps4 [Thibaudia martiniana]
          Length = 211

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++         Q   KQK + 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFVKKXXXXXXXXXQ--EKQKWRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E +     +   +++G T   L+  LE RLD I++R     TI  ARQ VNH H
Sbjct: 59  PYG-LTEPQLLKYVRXPXKAKGSTGQVLLQLLERRLDNILFRWGMASTIPGARQLVNHSH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-------LEASQLAERDVPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+ L          L + +   + VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIIXAREKSRALIQNSFQNLFDLPSXKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|33413223|emb|CAD86747.1| ribosomal protein small subunit 4 [Dicranoweisia crispula]
          Length = 188

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +    +++  VP +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|67035646|gb|AAY62754.1| small ribosomal protein subunit 4 [Aulacopilum hodgkinsoniae]
          Length = 191

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNH+H+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVNHKHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D+I +K + K    +L+    +++  VP +++ N         +I   L    
Sbjct: 117 SYRCKPQDLITIKNRQKSQGIILKNVDFSQKFKVPNHLTFNSLEKKGIVNQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|63191825|gb|AAY34872.1| small ribosomal protein subunit 4 [Stegonia latifolia]
          Length = 194

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|118577550|gb|ABL07141.1| small ribosomal protein 4 [Peperomia quadrifolia]
          Length = 183

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K PV+  S    L  Q R  K S + ++L  KQK++ +YG + E++     + A 
Sbjct: 1   PGLTSKRPVSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK  
Sbjct: 56  KAKGSTGQVLLQILEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  +   K    V  +   A R ++P++++++         +I          + +  
Sbjct: 116 DIITTRNAQKSKVLVQNSIDSASREELPKHLTLDSSQYKGIVNQIIDGK---WVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|157689408|gb|ABV65260.1| ribosomal protein S4 [Albizia julibrissin]
          Length = 187

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 10/193 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPS-YFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           G       K P+     G  L  Q R       + ++L  KQK++ +YG ++E++     
Sbjct: 1   GALPGLTSKKPI----VGSELRNQARLDNKKSQYCIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYR
Sbjct: 56  GIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHVLVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  + + K    +      + R ++P++++++         +I  S       +
Sbjct: 116 CKPQDIITARDEQKSRTLIQNYLDSSPREELPKHLTLHPFQYKGLVNQIIDSK---WVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|50235362|gb|AAT70714.1| Rps4 [Brachytheciastrum collinum]
          Length = 195

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+        K+P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLXTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|118626061|emb|CAL41751.1| small ribosomal protein 4 [Pachyschistochila carnosa]
          Length = 191

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G +     K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSHPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T    +  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVSLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY  + GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNRELGDIIAIKNKKKSQSVITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|32892106|gb|AAP88992.1| ribosomal protein S4 [Passiflora edulis]
          Length = 183

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLHSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|15145852|gb|AAK83544.1| rps4 [Tayloria froelichiana]
          Length = 189

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|78102671|gb|ABB21549.1| small ribosomal protein 4 [Plagiochila hirta]
          Length = 189

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCELGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|118577587|gb|ABL07159.1| small ribosomal protein 4 [Piper kadsura]
 gi|118577619|gb|ABL07175.1| small ribosomal protein 4 [Piper ribesioides]
          Length = 185

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK
Sbjct: 56  AGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  + + +    V  +   A R ++P++++++         +I  S       + +
Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|37992603|gb|AAR06480.1| small ribosomal protein 4 [Meteoriopsis reclinata]
 gi|37992607|gb|AAR06482.1| small ribosomal protein 4 [Neodicladiella pendula]
          Length = 190

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|32892144|gb|AAP89011.1| ribosomal protein S4 [Passiflora alata]
          Length = 183

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +    ++  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSFDSFSQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|37992599|gb|AAR06478.1| small ribosomal protein 4 [Meteorium buchananii]
          Length = 190

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|33411996|emb|CAD86744.1| ribosomal protein small subunit 4 [Amphidium lapponicum]
          Length = 187

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A +++    +++  +P ++S N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQKSQAMIIKNVDFSQKSKIPNHLSFNSLEKKGLVNKI---LDQESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|328488172|gb|AEB19899.1| small ribosomal protein 4 [Perssoniella vitreocincta]
          Length = 191

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K K K  + +     L ++  +P +++ N   +     +    +    
Sbjct: 117 SYNCKLGDIIAIKNKQKSQSMITRNLNLLQKFKIPNHLTFNSTQLRGLVNQ---RIHREF 173

Query: 191 YPVIMQPNLVVEFYSR 206
               +   LVVE+YSR
Sbjct: 174 INFKINELLVVEYYSR 189


>gi|75858246|gb|ABA28697.1| small ribosomal protein 4 [Treubia lacunosa]
          Length = 191

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGVLPGLTNKTLKSKLGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L+N ++V+I 
Sbjct: 57  KYVGIARKAKGSTGEVLLQLLEMRLDNIIFRLGLAFTIPGARQLVNHRHILINNKTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK  D+I +K K      + +    + +  +P +++ +    +    +I        
Sbjct: 117 SYHCKPKDLITIKNKPTSQLLITKNIDYSTKYKIPNHLTFDSVKKIGLVNQIIDR---EF 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|160415796|gb|ABX39205.1| small ribosomal protein 4 [Jaffueliobryum raui]
 gi|160415798|gb|ABX39206.1| small ribosomal protein 4 [Jaffueliobryum wrightii]
 gi|322719583|gb|ADX07728.1| small ribosomal protein subunit 4 [Jaffueliobryum wrightii]
          Length = 188

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A V++    +++D VP +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKARQKSQAMVIKNVDFSQKDKVPNHLTFNSLEKKGLVNQI---LDHGSIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|47606906|gb|AAT36373.1| ribosomal protein subunit 4 [Hymenodon sphaerothecius]
          Length = 195

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+     +    ++      K S + ++L  KQK++ YYG I+E
Sbjct: 1   RVRIIRRLGTLSGLTNKTSQLKANS---INQLTSNKKISQYRIRLEEKQKLRFYYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    V +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNRRKSQTIVNKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESISLKINELLVVEYYSR 193


>gi|37992697|gb|AAR06527.1| small ribosomal protein 4 [Tetrastichium fontanum]
          Length = 194

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKLIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKLKIPNHLTYSFLEKKGLINQI---LH 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|88608362|ref|YP_506463.1| ribosomal protein S4 [Neorickettsia sennetsu str. Miyayama]
 gi|123491757|sp|Q2GDI3|RS4_NEOSM RecName: Full=30S ribosomal protein S4
 gi|88600531|gb|ABD45999.1| ribosomal protein S4 [Neorickettsia sennetsu str. Miyayama]
          Length = 205

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 82/205 (40%), Positives = 131/205 (63%), Gaps = 3/205 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+     K ++ R++  +LWG  K PV+ R+Y PG HG+    K S F  Q  A++  + 
Sbjct: 1   MTTTIRRKFRVSRQMKASLWGSQKDPVHKRNYAPGQHGRAPVKKISDFYKQNAAQRAFR- 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  I +K+F ++F +A R +G+T+ NLIS LESR+ +++YR+  VPTIFAARQ ++H+H
Sbjct: 60  TYYVIGKKQFANVFSKAYRGKGNTNDNLISLLESRVSSVLYRSGMVPTIFAARQLISHKH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNI S+  KEGDV++++ ++  +  V+ A   +  + P Y+ V+ +      +
Sbjct: 120 VTVNGEIVNICSFTLKEGDVVQIRDRASNIPCVVAALN-SNSESPHYLEVDREKRSVKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
            +P   +DVPYPV+M+PNLV E++S
Sbjct: 179 VLP-KFEDVPYPVVMEPNLVTEYFS 202


>gi|283549380|dbj|BAI66352.1| small ribosomal protein 4 [Jungermannia subulata]
          Length = 188

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKVLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I VK K K  + + +   L ++  +P +++ +   +  +  +  +  
Sbjct: 117 VDIPSYNCELGDIIAVKNKQKSQSIITKNINLFQKSKIPSHLTFDSAKLHGSVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWVHLKINELLVV 188


>gi|89031434|gb|ABD59454.1| Rps4 [Passiflora incarnata x Passiflora sprucei]
          Length = 183

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPXARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|42718094|gb|AAS38469.1| rps4 [Tetraplodon lamii]
          Length = 189

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I  K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITTKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37992685|gb|AAR06521.1| small ribosomal protein 4 [Squamidium macrocarpum]
          Length = 192

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D + +K + K    + +  +  ++  +P +++           +I   L   
Sbjct: 117 PSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|7576509|gb|AAF63867.1| ribosomal protein system 4 [Leucodon brachypus]
          Length = 189

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|78102721|gb|ABB21574.1| small ribosomal protein 4 [Plagiochila stephensoniana]
          Length = 189

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|328488186|gb|AEB19906.1| small ribosomal protein 4 [Schistochila doriae]
          Length = 191

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ YYG ++E++  
Sbjct: 1   IRRLGSLPGLTNKILKPKSSY---IDRSTANKKLSQYRIRLEEKQKLRFYYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K    +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIRNKQKSQLIITRNLNLLQKLKIPNHLTFDSTQLQGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|160415802|gb|ABX39208.1| small ribosomal protein 4 [Codriophorus aquaticus]
          Length = 188

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPPLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|11878070|gb|AAG40783.1| small ribosomal protein 4 [Sphagnum palustre]
          Length = 186

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P +  SY   ++      K S + ++L  KQK++ +YG I+E++     + 
Sbjct: 1   VLPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI SYRCK
Sbjct: 57  ARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K  A +  +   +     P +++++      +  +I          + +
Sbjct: 117 PQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|16565399|gb|AAL26214.1|AF313614_1 small ribosomal protein 4 [Chloranthus multistachys]
          Length = 190

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 9/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLKTLPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRFHYG-LTERQLL 55

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVN R V+I 
Sbjct: 56  RYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRHILVNSRIVDIP 115

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D+I  + + +    +      +   ++P++++++         +I  S     
Sbjct: 116 SYRCKPRDIITTRDEQRSRTLIQNHIDSSPHEELPKHLTLHSFQYKGLVNQIIDSK---S 172

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 173 IGLKINELLVVEYYSR 188


>gi|37683556|gb|AAQ98829.1| small ribosomal protein 4 [Pogonatum nanum]
          Length = 189

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 2   LGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYR
Sbjct: 58  RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDNIVNIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A + +    +++  +P +++ N         +I   L      +
Sbjct: 118 CKPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESISL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|46486562|gb|AAS98717.1| ribosomal protein subunit 4 [Spiridens vieillardii]
          Length = 194

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P ++  +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLKYSSLEKKGFVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|78369611|gb|ABB43035.1| ribosomal protein 4 [Syrrhopodon japonicus]
          Length = 193

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KIIRRLGVLPGLTNKIPQLKSSS---INQAISNKKISQYRIRLEEKQKLRFHYG-LTERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHR +LVN R VN
Sbjct: 57  LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRQILVNNRIVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SY+CK  D I +K + K    +++ +  + +  +P +++ N         ++   L  
Sbjct: 117 IPSYQCKLQDSITIKDEQKYQTMIVKNTNFSPKYKIPSHLTFNSVEQKGIVNQL---LDQ 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|63191799|gb|AAY34859.1| small ribosomal protein subunit 4 [Hilpertia velenovskyi]
          Length = 191

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRKKSQVMITKNLDFSQKSKIPNHLTFNSLEKKGLINQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|149192393|ref|ZP_01870594.1| 30S ribosomal protein S4 [Vibrio shilonii AK1]
 gi|148833784|gb|EDL50820.1| 30S ribosomal protein S4 [Vibrio shilonii AK1]
          Length = 172

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/166 (39%), Positives = 104/166 (62%), Gaps = 6/166 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++T+      PG+HG RR     Y G+QLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEY-GVQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           +H+ +LVNG+ VN+ S++    DV+ +++K+KQ A +  A ++A+ 
Sbjct: 119 SHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVADN 164


>gi|37992457|gb|AAR06407.1| small ribosomal protein 4 [Chaetomitrium borneense]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG ++E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-VTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNGCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I ++ + K    + +  +  ++  +P +++ +          I   L 
Sbjct: 117 DIPSYRCKPQDFITIENRQKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNEI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|13508185|ref|NP_110134.1| 30S ribosomal protein S4 [Mycoplasma pneumoniae M129]
 gi|1173262|sp|P46775|RS4_MYCPN RecName: Full=30S ribosomal protein S4
 gi|639791|gb|AAA61698.1| ribosomal protein S4 [Mycoplasma pneumoniae]
 gi|1674077|gb|AAB96043.1| ribosomal protein S4 [Mycoplasma pneumoniae M129]
 gi|301633685|gb|ADK87239.1| ribosomal protein S4 [Mycoplasma pneumoniae FH]
          Length = 205

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 79/207 (38%), Positives = 111/207 (53%), Gaps = 9/207 (4%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           K   S  K  RR+G +L    K  S    R   PG HG R R S  S +  QL+ KQ+M+
Sbjct: 2   KYTGSIFKRSRRLGFSLLENNKEFSKGKKRKTIPGQHGNRFRSSTMSGYAQQLQEKQRMQ 61

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I++K+FR +F+   + RG+ + NL   LESRLD IVYR  F PT  +ARQ VNH 
Sbjct: 62  YMYG-ITDKQFRRLFRLVLKQRGNLAVNLFRVLESRLDNIVYRMGFAPTRRSARQLVNHG 120

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HVL+N R+V+  S     GD + +K K+ ++  V  AS+     V  ++  N+     T+
Sbjct: 121 HVLLNDRTVDTPSIILNPGDKVRLKAKTIKIPIVKAASESG--VVSPFVETNNKTFEGTY 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VR P   +    P  +  + VVE+Y R
Sbjct: 179 VRFPERSE---LPAGINESYVVEWYKR 202


>gi|32401828|gb|AAP80902.1| small ribosomal protein 4 [Euptelea polyandra]
          Length = 184

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + K  A +  +       ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTRDEQKSRALIQNSLDSPPHEELPKHLTLHSSQYQGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|160415784|gb|ABX39199.1| small ribosomal protein 4 [Grimmia caespiticia]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|42718098|gb|AAS38471.1| rps4 [Tetraplodon angustatus]
          Length = 189

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|42718072|gb|AAS38458.1| rps4 [Tayloria indica]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PT+  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTVPGARQLVNHRHILVNDRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  + +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNQQKSQAIINKNIEFSQKSKIPNHLTYNSLKKQGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|42405304|gb|AAS13478.1| rps4 small ribosomal protein [Rhynchostegiopsis flexuosa]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A + +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKLKIPNHLTYSFLEKKGLINQI---LH 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992663|gb|AAR06510.1| small ribosomal protein 4 [Ptychomnion aciculare]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K +      + +     ++  +P +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFIIIKDEKNYEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|71679580|gb|AAZ38858.1| ribosomal protein small subunit 4 [Hymenophyllum mnioides]
          Length = 207

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 10/207 (4%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+ +      K      +       Q    K S F ++L AKQ+++  YG
Sbjct: 5   YRGPRFKIIRRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYG 62

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
             +E++     + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LV
Sbjct: 63  S-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILV 121

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYIS--VNHDNM-VATF 179
           N   V+I SYRCK  D+I V+ +    +   E    + R  +P++++   + DNM     
Sbjct: 122 NNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNMPKGLV 181

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             I          + +   LVVE+YSR
Sbjct: 182 NGI---ANRESIDLNINELLVVEYYSR 205


>gi|160415788|gb|ABX39201.1| small ribosomal protein 4 [Grimmia mollis]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|11228643|gb|AAG33107.1| small ribosomal protein 4 [Eucamptodon muelleri]
          Length = 189

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +++    +++  VP +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLINQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|328488182|gb|AEB19904.1| small ribosomal protein 4 [Schistochila blumei]
          Length = 191

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ YYG ++E++  
Sbjct: 1   IRRLGSLPGLTNKILKPKSSY---IDRSTANKKFSQYRIRLEEKQKLRFYYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K    +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIRNKQKSQLIITRNLNLLQKLKIPNHLTFDSTQLQGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|157689536|gb|ABV65324.1| ribosomal protein S4 [Penaea mucronata]
          Length = 187

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 10/193 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R SK S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRP----KAGSDLRNQSRSSKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  + + K  A +      + RD  +P++ + +         +I  S +     +
Sbjct: 116 KPQDIITARDEQKSRALIQNCLDSSPRDEELPKHXTFHPFQYKGLVNQIIDSKR---VGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|21914178|gb|AAM81311.1| ribosomal protein subunit 4 [Haplodontium reticulatum]
 gi|24473840|gb|AAL82764.1| small ribosomal subunit protein 4 [Ptychostomum pallescens]
          Length = 190

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +   L ++   P +++ N         +I   L     
Sbjct: 117 YRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|254796937|ref|YP_003081774.1| ribosomal protein S4 [Neorickettsia risticii str. Illinois]
 gi|254590185|gb|ACT69547.1| ribosomal protein S4 [Neorickettsia risticii str. Illinois]
          Length = 205

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 85/205 (41%), Positives = 132/205 (64%), Gaps = 3/205 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+     K ++ R++  +LWG  K PV+ R+YGPG HG+    K S F  Q  A++  + 
Sbjct: 1   MTTTIRRKFRVSRQMKASLWGSQKDPVHKRNYGPGQHGRAPVKKISDFYKQNAAQRAFR- 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y  I +K+F ++F +A R +G+T+ NLIS LESR+ +++YR+  VPTIFAARQ V+H+H
Sbjct: 60  TYYVIGKKQFANVFGKAYRGKGNTNDNLISLLESRVSSVLYRSGMVPTIFAARQLVSHKH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           V VNG  VNI S+  KEGDV++++ ++  +  V+ A   +  + P Y+ VN +      +
Sbjct: 120 VTVNGEIVNICSFTLKEGDVVQIRDRASNIPCVVAALS-SNSESPHYLEVNREKRSVKLL 178

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYS 205
            +P   +DVPYPV+M+PNLV E++S
Sbjct: 179 VLP-KFEDVPYPVVMEPNLVTEYFS 202


>gi|257126747|ref|YP_003164861.1| 30S ribosomal protein S4 [Leptotrichia buccalis C-1013-b]
 gi|260891350|ref|ZP_05902613.1| ribosomal protein S4 [Leptotrichia hofstadii F0254]
 gi|257050686|gb|ACV39870.1| ribosomal protein S4 [Leptotrichia buccalis C-1013-b]
 gi|260858733|gb|EEX73233.1| ribosomal protein S4 [Leptotrichia hofstadii F0254]
          Length = 195

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 11/206 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  R +G +      +  + R+  P         K + +G Q R KQK+K 
Sbjct: 1   MARDRQPVLKRCRNLGLDPIVLGVNKKSNRNIRP-----NANRKLTEYGTQQREKQKVKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F  +++EA R  G T   L+ +LE RLD ++YR  F  T   ARQ V+H H
Sbjct: 56  VYG-VMEKQFYKLYEEATRKEGVTGELLLQYLERRLDNVIYRLGFGATRRQARQIVSHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +L+NG+ VNI SYR K+GDVI VK+ SK+LA + E+    ++ VP ++S+    + A  +
Sbjct: 115 ILINGKRVNIASYRVKQGDVITVKEDSKELALIKESV--GQKTVPGWLSLEEGALTAKVL 172

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P           +   +++EFYSR
Sbjct: 173 ENPGRDA---VDFEVDEAMIIEFYSR 195


>gi|37992423|gb|AAR06390.1| small ribosomal protein 4 [Ancistrodes genuflexa]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   LRIIRRLGFLPGLSNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T    +   E+R D I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVSLQLPETRSDNIIFRLGMTPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDQRKSEAIIGKNIEFYQKYKIPNHLTYNLLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESISLKINELLVVEYYSR 192


>gi|29027220|gb|AAN47172.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
          Length = 189

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIIGKNLDFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|74273209|gb|ABA01304.1| ribosomal protein S4 [Passiflora mathewsii]
          Length = 183

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +      + +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPRKKLPKHLTLHPFQYKGLVTQIIDSK---WVGLP 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|160415812|gb|ABX39213.1| small ribosomal protein 4 [Schistidium sp. RHM-2007]
 gi|160415814|gb|ABX39214.1| small ribosomal protein 4 [Schistidium papillosum]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSL---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|42794710|gb|AAS45750.1| Rps4 [Thibaudia costaricensis]
          Length = 211

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K        Q   KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPKIGNSRRTQSRFVKKKXXXXXXXXQ--EKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     +   +++G T   L+  LE RLD I++R     TI  ARQ VN RH
Sbjct: 59  HYG-LTERQLLKYVRIPGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNXRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           V VNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VXVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPSHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|32892086|gb|AAP88982.1| ribosomal protein S4 [Passiflora caerulea]
 gi|32892092|gb|AAP88985.1| ribosomal protein S4 [Passiflora setulosa]
 gi|32892096|gb|AAP88987.1| ribosomal protein S4 [Passiflora tenuifila]
 gi|32892098|gb|AAP88988.1| ribosomal protein S4 [Passiflora urubiciensis]
 gi|32892130|gb|AAP89004.1| ribosomal protein S4 [Passiflora amethystina]
 gi|32892132|gb|AAP89005.1| ribosomal protein S4 [Passiflora campanulata]
 gi|32892134|gb|AAP89006.1| ribosomal protein S4 [Passiflora jilekii]
 gi|32892138|gb|AAP89008.1| ribosomal protein S4 [Passiflora garckei]
 gi|74273179|gb|ABA01289.1| ribosomal protein S4 [Passiflora kermesina]
 gi|74273181|gb|ABA01290.1| ribosomal protein S4 [Passiflora miersii]
 gi|74273195|gb|ABA01297.1| ribosomal protein S4 [Passiflora sprucei]
 gi|74273199|gb|ABA01299.1| ribosomal protein S4 [Passiflora watsoniana]
 gi|74273219|gb|ABA01309.1| ribosomal protein S4 [Passiflora mendoncaei]
 gi|90970052|gb|ABE02795.1| ribosomal protein S4 [Passiflora gibertii]
 gi|91795203|gb|ABE60882.1| ribosomal protein S4 [Passiflora loefgrenii]
 gi|91795205|gb|ABE60883.1| ribosomal protein S4 [Passiflora picturata]
          Length = 183

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|32892112|gb|AAP88995.1| ribosomal protein S4 [Passiflora mansoi]
          Length = 183

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K GD+I VK + K    +  +     +  +P++++++      +  +I  S       + 
Sbjct: 113 KPGDLITVKDEQKSKDMIKNSLDSFRQAQLPKHLTLHRSQYKGSVNKIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|37992535|gb|AAR06446.1| small ribosomal protein 4 [Glyphothecium sciuroides]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKLIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K +      + +     ++  +P +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992481|gb|AAR06419.1| small ribosomal protein 4 [Cyclodictyon albicans]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +L ++  +P +++ N         +I +   
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIELYQKIKIPNHLTYNFLEKKGLINQILNRD- 175

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 176 --SIGLKINELLVVEYYSR 192


>gi|26421789|gb|AAN78153.1| ribosomal protein S4 [Tortula vahliana]
          Length = 195

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI R +G       K P          +      K S + ++L  KQK++  YG I+E+
Sbjct: 2   VKIIRGLGGLPGLSNKIPHLK---PSSTNQSTSNKKISQYRIRLEEKQKLRFLYG-ITER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 58  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +  + K    + +     ++  +P +++ N         +I   L 
Sbjct: 118 NIPSYRCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LD 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 QESIGLKINELLVVEYYSR 193


>gi|63101071|gb|AAY33160.1| small ribosomal protein 4 [Chaetomitriopsis glaucocarpa]
          Length = 195

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +          I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNRQKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNEI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|42718096|gb|AAS38470.1| rps4 [Tetraplodon itatiaiae]
 gi|42718102|gb|AAS38473.1| rps4 [Tetraplodon fuegianus]
          Length = 189

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSST---NQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN R V+I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37992669|gb|AAR06513.1| small ribosomal protein 4 [Rhynchostegiopsis tunguraguana]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNKRKSETIISKNIEFYQKLKIPNHLTYSFLEKKGLINQI---LH 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|32401816|gb|AAP80896.1| small ribosomal protein 4 [Erigeron formosissimus]
          Length = 184

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRLA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I  + + K  A +  +   + + ++P ++++          +I  S       + + 
Sbjct: 116 RDTIAARDEQKSRALIQNSLDSSPQEELPNHLTLQPFQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|302339986|ref|YP_003805192.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293]
 gi|301637171|gb|ADK82598.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293]
          Length = 205

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 7/203 (3%)

Query: 7   SKHKIDRRIGENLWGRPK--SPVNTRSYGPGLH-GQRRKSKPSYFGLQLRAKQKMKKYYG 63
            + KI RR+G NL+G PK    +  +  GPG     RR  K S +G+QL  KQK++  YG
Sbjct: 7   PRGKIVRRLGVNLFGNPKYDRILKKKPNGPGKSPKNRRGRKISDYGMQLLEKQKVRYCYG 66

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            +SEK+FR+ F EA R +G T    I  LESRLD  +YR  +  +   ARQ V+H+H  V
Sbjct: 67  -LSEKQFRTTFFEAKRKQGVTDEIFIQLLESRLDNSIYRLGWAVSREQARQMVSHKHFKV 125

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183
           NG+S NI S R K GD I V+ K    A + E    + R    ++S ++D ++AT+   P
Sbjct: 126 NGQSTNIPSIRLKPGDEIAVRDKKNIQAIIRERIVNSGRARTPWLSADNDKLIATYDAHP 185

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           S     P         ++EFYS+
Sbjct: 186 SLEAAKPVG---DLQAIIEFYSK 205


>gi|160415778|gb|ABX39196.1| small ribosomal protein 4 [Glyphomitrium humillimum]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++ +VP ++  N         +I   L      +
Sbjct: 117 CKPQDFITIKNRQKSQAMIIKNVDFSQKAEVPNHLIFNSLEKNGLVNQI---LDQESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992673|gb|AAR06515.1| small ribosomal protein 4 [Schimperobryum splendidissimum]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+ +
Sbjct: 1   VRIIRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITXR 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 NIPSYRCKPQDFITIKNQRKSEDIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|12330508|gb|AAG52791.1| ribosomal protein 4 [Rhachithecium papillosum]
          Length = 189

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K           ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGPLPGLTNKISQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVSIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    +++    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIXDRQKSQTIIIKNLDFSQKTKIPNHLTFNSLEKKGLVNQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|46811022|gb|AAT01829.1| small ribosomal protein 4 [Jensenia connivens]
          Length = 197

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G  L G     + +RS            K S + ++L  KQK++ +YG ++E++
Sbjct: 5   KNIRRLGA-LPGLSHKMLGSRSGYTNQ--LTANKKISQYRIRLEEKQKLRFHYG-LTERQ 60

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+L+N   VN
Sbjct: 61  LLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHILINDDIVN 120

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKD 188
           I SY CK  DVI +K + +  + + +   L  E+ +P +++ +      +  +I      
Sbjct: 121 IPSYNCKPRDVITIKNRRESQSVITKNINLLREQRIPNHLTFDSTRFCGSVNQIIDR--- 177

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 178 EWISLKINELLVVEYYSR 195


>gi|49182787|gb|AAT57855.1| small ribosomal protein [Radula complanata]
          Length = 195

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+    +     +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+     + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H ++N  +
Sbjct: 57  KQLLKYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY C+ GD+I V+ + K  + + +   L ++ ++P +++ +   +  +  +    +
Sbjct: 117 VNIPSYNCELGDIITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSINQ---RI 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                   +   LVVE+YSR
Sbjct: 174 DYNSINFKINELLVVEYYSR 193


>gi|33413183|emb|CAD86728.1| ribosomal protein small subunit 4 [Nanobryum dummeri]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    L+      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 5   RRLGILQGLTNKIPQLKSSS---LNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 60

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI S
Sbjct: 61  YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPS 120

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++   L+++  VP +++ N         +I   L     
Sbjct: 121 YRCKPQDFITIKDRQKSQAMIIKNINLSQKYKVPNHLTFNSLEKKGLVNQI---LDQESI 177

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 178 GLKINELLVVEYYSR 192


>gi|63191867|gb|AAY34893.1| small ribosomal protein subunit 4 [Weissia controversa]
          Length = 190

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|74273223|gb|ABA01311.1| ribosomal protein S4 [Passiflora umbilicata]
          Length = 183

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  +       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDTK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|78102631|gb|ABB21529.1| small ribosomal protein 4 [Plagiochila bispinosa]
          Length = 189

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|213856915|ref|ZP_03384155.1| 30S ribosomal protein S4 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 167

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/169 (40%), Positives = 108/169 (63%), Gaps = 7/169 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
              K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQK+++
Sbjct: 1   MGPKLKLSRREGTDLFLKSGVRAIDTKCKIGQAPGQHGA-RKPRLSDYGVQLREKQKVRR 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 60  IYGVL-ERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKA 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168
           ++VNGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++
Sbjct: 119 IMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWL 167


>gi|160415794|gb|ABX39204.1| small ribosomal protein 4 [Indusiella thianschanica]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A V++    +++D VP +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKARKKSQAMVIKNVDFSQKDKVPNHLTFNSLEKKGLVNQI---LDHGSIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|67035891|gb|AAY62872.1| small ribosomal protein subunit 4 [Schofieldiella micans]
          Length = 194

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I  R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIXRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P ++  +         +I     
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQIXDR-- 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 -ESIGLKINELLVVEYYSR 192


>gi|16565359|gb|AAL26198.1|AF313591_1 small ribosomal protein 4 [Angiopteris evecta]
 gi|184128009|gb|ACC67904.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128029|gb|ACC67914.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128045|gb|ACC67922.1| ribosomal protein small subunit 4 [Angiopteris angustifolia]
 gi|184128047|gb|ACC67923.1| ribosomal protein small subunit 4 [Angiopteris angustifolia]
 gi|184128065|gb|ACC67932.1| ribosomal protein small subunit 4 [Angiopteris caudatiformis]
          Length = 199

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + ++ RR+ +      K+  + ++       Q    K S + ++L AKQ+++  +G ++E
Sbjct: 1   RLRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183
           V+I SYRCK  D+I V+ ++     V +  +   +D +PE+++ +    +       RI 
Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLDINELLVVEYYSR 197


>gi|12330454|gb|AAG52764.1| ribosomal protein 4 [Sphagnum perichaetiale]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P +  +Y   ++      K S + ++L  KQK++ +YG I+ ++     +
Sbjct: 2   GILPGLTSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITXRQLLKYVR 57

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI SYRC
Sbjct: 58  IARRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRC 117

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A +  +   +     P +++++      +  +I          + 
Sbjct: 118 KPQDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLK 174

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 175 INELLVVEYYSR 186


>gi|310657466|ref|YP_003935187.1| 30S ribosomal protein s4 [Clostridium sticklandii DSM 519]
 gi|308824244|emb|CBH20282.1| 30S ribosomal protein S4 [Clostridium sticklandii]
          Length = 192

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 14/206 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + K+ R +G N++  PK+            G + + K S +G QLR KQK+K 
Sbjct: 1   MARPMGPRFKVARSLGVNVFDHPKAL---------NRGVKPQKKISEYGKQLREKQKLKA 51

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F+   + A  S+G++   L+  LE RLD + YR  F  T+  ARQ V H H
Sbjct: 52  YYGVL-EKQFKIYVEAAMHSKGNSGEKLVQRLEQRLDNMTYRLGFASTLRQARQMVVHGH 110

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+  SY+ +  D I +K+KSK +A   ++      ++P Y+  N ++     +
Sbjct: 111 ILVNGKKVDRPSYKVEVEDTISLKEKSKSIAIFKDSFTSTTTNLP-YLEKNLNDFSGKLI 169

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P   +    P+ +  + ++EFYS+
Sbjct: 170 AEPKRDQ---VPIEVTDSYIIEFYSK 192


>gi|160415810|gb|ABX39212.1| small ribosomal protein 4 [Schistidium crassipilum]
          Length = 188

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|293634051|gb|ADE60405.1| ribosomal protein subunit 4 [Pogonatum proliferum]
          Length = 187

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPPLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I  K + +  A + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITTKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|160415780|gb|ABX39197.1| small ribosomal protein 4 [Dryptodon anomalus]
          Length = 188

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  + +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|21914156|gb|AAM81300.1| ribosomal protein subunit 4 [Bryum bicolor]
          Length = 195

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 6   RRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 61

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 62  YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 121

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +   L ++   P +++ N         +I   L     
Sbjct: 122 YRCKPEDSITIKNRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESI 178

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 179 GLKINELLVVEYYSR 193


>gi|47606942|gb|AAT36391.1| ribosomal protein subunit 4 [Rhizogonium graeffeanum]
          Length = 194

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    +    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKIPQLKSNS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDQQKYKTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|47606896|gb|AAT36368.1| ribosomal protein subunit 4 [Garovaglia elegans]
          Length = 195

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P         ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I VK +      + +     ++  +P +++           +I   L
Sbjct: 117 VNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|16565389|gb|AAL26209.1|AF313609_1 small ribosomal protein 4 [Cycas revoluta]
          Length = 194

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+        K P  +R+        R+    S + ++   KQK++ +YG ++E
Sbjct: 1   RVRIIRRLRTLPGLTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 56  RQLLKYVRIAGRAKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRV 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  DVI +  + +  A + +   L+++D +P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDVITIIDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WISLKINELLVVEYYSR 192


>gi|7576523|gb|AAF63874.1| ribosomal protein system 4 [Henicodium geniculatum]
          Length = 190

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKPETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|86438912|emb|CAJ55428.1| small ribosomal protein 4 [Plagiochila pleurata]
          Length = 180

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 5/184 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGILPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLXXSV 176

Query: 180 VRIP 183
            ++ 
Sbjct: 177 NQMI 180


>gi|293634015|gb|ADE60387.1| ribosomal protein subunit 4 [Oligotrichum canaliculatum]
          Length = 189

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTLQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|262192902|gb|ACY30468.1| small ribosomal subunit protein 4 [Pohlia nutans]
          Length = 188

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +     ++  +P +++ N  N      +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|42794720|gb|AAS45755.1| Rps4 [Thibaudia litensis]
          Length = 211

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKW 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG + E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LPERQLLKSVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP +++ N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTXN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|63191829|gb|AAY34874.1| small ribosomal protein subunit 4 [Calyptopogon mnioides]
          Length = 194

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L 
Sbjct: 117 NIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|170516209|gb|ACB15106.1| small ribosomal protein 4 [Nothotsuga longibracteata]
          Length = 194

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K P     Y      +    K S + ++   KQK++ +YG ++E
Sbjct: 1   RLKIIRRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   
Sbjct: 56  RQLLKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHM 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK  DVI ++ + +  A + +   L +RD +P++++ N         +I  S 
Sbjct: 116 VDIPSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 ---WISLKINELLVVEYYSR 192


>gi|37992549|gb|AAR06453.1| small ribosomal protein 4 [Hildebrandtiella guyanensis]
 gi|37992551|gb|AAR06454.1| small ribosomal protein 4 [Hildebrandtiella guyanensis]
          Length = 190

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNSCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YQCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|15145858|gb|AAK83547.1| rps4 [Tayloria splachnoides]
          Length = 189

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSNS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDHIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRLKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37683558|gb|AAQ98830.1| small ribosomal protein 4 [Pogonatum gracilifolium]
          Length = 187

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFIIIKNRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|118577629|gb|ABL07180.1| small ribosomal protein 4 [Piper vitiense]
 gi|118577645|gb|ABL07188.1| small ribosomal protein 4 [Macropiper puberulum]
          Length = 185

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK
Sbjct: 56  AGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  + + +    V  +   A R ++P++++++         +I  S       + +
Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|37992655|gb|AAR06506.1| small ribosomal protein 4 [Pilotrichella flexilis]
          Length = 190

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|12330504|gb|AAG52789.1| ribosomal protein 4 [Schlotheimia rugifolia]
          Length = 189

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTSQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++D +P +++ N         +I   L+     
Sbjct: 117 RCKPQDSITIKDRQKSQDIINKNIDFYQKDKIPNHLTYNSLEKKGLVNQI---LERELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|2541880|dbj|BAA22816.1| ribosomal protein S4 [Cyanidioschyzon merolae]
          Length = 191

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 20/207 (9%)

Query: 1   MSKRESSKHKIDRR-IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           MS+    + +I RR +G       KSP N R+  PG H  + +    Y G QL+ KQK++
Sbjct: 1   MSRYLGPRVRIIRRRLGILPAFTNKSP-NKRTGVPGEHAHKTRKLSEYAG-QLQGKQKLQ 58

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YYG I+  +    F++A +SR  T   L+  LE+RLD +VYRA F PT+ AARQ VNH 
Sbjct: 59  YYYG-ITNNQLARYFRQAKKSRASTGIELLKMLETRLDHVVYRAGFAPTLPAARQLVNHG 117

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV VNG  V I S+ C+   +IEVK KS   A            +P Y+ V +      F
Sbjct: 118 HVKVNGNQVTIASFACQVNHIIEVKAKSPSSAQ-----------LPPYLQVEN-----QF 161

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V++   ++       +   LVVE+Y+R
Sbjct: 162 VKMIQPVEKDWLAFRVNELLVVEYYTR 188


>gi|328488170|gb|AEB19898.1| small ribosomal protein 4 [Paraschistochila pinnatifolia]
          Length = 191

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRSGVLPGLTSKTLKPKSSY---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +         
Sbjct: 117 SYNCELGDIIAIKNKQKSESMITRNLNLLQKFKIPNHLTFDSTQLQGLVNQKIHR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
               +   LVVE+YSR
Sbjct: 174 VNFKINELLVVEYYSR 189


>gi|59803311|gb|AAX07764.1| Rps4 [Pellia appalachiana]
          Length = 194

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+G       K  +   S   G     +K   S + ++L  KQK++ +YG ++
Sbjct: 1   PRTKIIRRLGALPGLTSK-ILELESGYIGQSIPNKK--VSQYRIRLEEKQKLRFHYG-LT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++     + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+L+N  
Sbjct: 57  ERQLLKYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDD 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
           +V+I SY C+  DVI V  + K+   +       +  VP +++ +      +  +     
Sbjct: 117 TVDIPSYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR- 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 175 --ECIDLKINELLVVEYYSR 192


>gi|78102719|gb|ABB21573.1| small ribosomal protein 4 [Plagiochila salacensis]
          Length = 189

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQVLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I +  K K  A V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCKPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|11228656|gb|AAG33113.1| small ribosomal protein 4 [Leucoloma serrulatum]
          Length = 191

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPELKSNS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K +       ++ +  +++  VP +++ N         +I        
Sbjct: 117 SYRCKPKDFITIKNRQNFQNMTIKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|74273185|gb|ABA01292.1| ribosomal protein S4 [Passiflora nitida]
          Length = 183

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLSSKSPIARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|157689470|gb|ABV65291.1| ribosomal protein S4 [Elatine triandra]
          Length = 183

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K P+   +    L  Q R  K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   PGLTSKRPIAKNN----LRNQSRPGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAA 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ +NHRH+LVNGR V+I SYRCK  
Sbjct: 56  KAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLINHRHILVNGRIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  + + K  A +      + ++++P++++++         +I  S       + +  
Sbjct: 116 DIITARDEQKSRAMIQNYLDSSPQKELPKHLTLHPLQYKGLVNQIIDSK---WVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|37992683|gb|AAR06520.1| small ribosomal protein 4 [Squamidium leucotrichum]
          Length = 193

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   RIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+
Sbjct: 57  LLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNECIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D + +K + K    + +  +  ++  +P +++           +I   L  
Sbjct: 117 IPSYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|46811042|gb|AAT01839.1| small ribosomal protein 4 [Podomitrium phyllanthus]
          Length = 194

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G  L G     + ++      +      K S + ++L  KQK++ +YG ++E++
Sbjct: 2   KIIRRLGA-LPGLSYKMLGSKPSHT--NRLTTNRKISQYRIRLEEKQKLRFHYG-LTERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A  ++G T   L+  LE RLD IV+R    PTI AARQ VNHRH+++N  +VN
Sbjct: 58  LLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIVINDNTVN 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKD 188
           I SY CK  DVI +K + +  + + +   L  E+ +P +++ +      +  +I      
Sbjct: 118 IPSYNCKPRDVITIKNRRESQSIITKNINLFREQRIPNHLTFDSTRFYGSVNQIIDR--- 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 EWISLKINELLVVEYYSR 192


>gi|207108317|ref|ZP_03242479.1| 30S ribosomal protein S4 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 178

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 9/180 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           M++   +  +++RR G +L  +       KS ++ R+YGPG HGQ R++K S +GLQL+ 
Sbjct: 1   MARYRGAVERLERRFGVSLALKGERRLSGKSALDKRAYGPGQHGQ-RRAKTSDYGLQLKE 59

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK K  YG ISEK+FRSIF EA+R  G+T  NLI  +E RLD +VYR  F  T  +ARQ
Sbjct: 60  KQKAKMMYG-ISEKQFRSIFVEANRLDGNTGENLIRLIERRLDNVVYRMGFATTRSSARQ 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHD 173
            V H HVLV+G+ ++I SY  + G  IE+K+K+K    V+ A +L A+  +  +I V  +
Sbjct: 119 LVTHGHVLVDGKRLDIPSYFVRSGQKIEIKEKTKSNPQVVRAMELTAQTGIVPWIDVEKE 178


>gi|7576567|gb|AAF63896.1| ribosomal protein system 4 [Rhytidiadelphus squarrosus]
          Length = 188

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQKKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|160415800|gb|ABX39207.1| small ribosomal protein 4 [Ptychomitrium drummondii]
          Length = 188

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ +NH+H+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLNMAPTIPGARQLINHKHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A V++    +++  VP +++ N      +  +I   L      +
Sbjct: 117 CKPQDFITIKARQKSQAMVIKNVDFSQKYKVPNHLTFNSLEKKGSVNQI---LDHGSIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|7576573|gb|AAF63899.1| ribosomal protein system 4 [Ctenidium malacodes]
          Length = 190

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|184127941|gb|ACC67870.1| ribosomal protein small subunit 4 [Marattia kaulfussii]
          Length = 199

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+ +      K+  + ++       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183
           V+I SYRCK  D+I V+ +      + +  +   +D +PE+++ +    +       RI 
Sbjct: 118 VDIPSYRCKPKDIISVRDQPNSQILMKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197


>gi|63191839|gb|AAY34879.1| small ribosomal protein subunit 4 [Streptotrichum ramicola]
          Length = 191

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    +     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +  + K  + +    + +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITINNRKKSQSIITNNIEFSQKSKIPHHLAFNSLEKKGLINQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|118577615|gb|ABL07173.1| small ribosomal protein 4 [Piper pendulispicum]
          Length = 185

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK
Sbjct: 56  AGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  + + +    V  +   A   ++P++++++         +I  S       + +
Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASHEELPKHLTLDSSQYKGVVNQIIDSK---WVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|67035885|gb|AAY62869.1| small ribosomal protein subunit 4 [Pterogonidium pulchellum]
          Length = 190

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 2   RLGTLPGLTNKTSQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V+I SY
Sbjct: 58  IRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCMVDIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D+I +K + K    + +  +  ++  +P +++ N         +I          
Sbjct: 118 RCKPQDLISIKNQLKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQIIDR---ESIG 174

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 175 LKINELLVVEYYSR 188


>gi|67036120|gb|AAY62986.1| small ribosomal protein subunit 4 [Taxiphyllum deplanatum]
          Length = 194

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRXGILPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|74273111|gb|ABA01255.1| ribosomal protein S4 [Passiflora racemosa]
          Length = 183

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRLVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|184128041|gb|ACC67920.1| ribosomal protein small subunit 4 [Angiopteris lygodiifolia]
          Length = 199

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + ++ RR+ +      K+  + ++       Q    K S + ++L AKQ+++  +G ++E
Sbjct: 1   RLRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183
           V+I SYRCK  D+I V+ ++     V +  +   +D +PE+++++    +       RI 
Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLDINELLVVEYYSR 197


>gi|146261581|gb|ABQ15100.1| ribosomal protein S4 [Pterostemon rotundifolius]
          Length = 188

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGPLPGLTSKRP----RVISDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKY 55

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 56  VRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRJVDIPSY 115

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D+I  + + K  A +      +   ++P++++++         +I  +       
Sbjct: 116 RCKSRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDTK---WVG 172

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 173 LKINELLVVEYYSR 186


>gi|258543843|ref|ZP_05704077.1| 30S ribosomal protein S4 [Cardiobacterium hominis ATCC 15826]
 gi|258520932|gb|EEV89791.1| 30S ribosomal protein S4 [Cardiobacterium hominis ATCC 15826]
          Length = 159

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 5/163 (3%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S +G QLR KQK+K+ YG + E++FR+ +K+A + +G T  NL+ FLE RLD +VYR  
Sbjct: 1   MSDYGNQLREKQKLKRIYGVL-ERQFRNYYKKASQKKGSTGENLLQFLEQRLDNVVYRMG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERD 163
           +  T   ARQ V+H  + VNG+ V I SY+ +  DV+ V++KS++   +  + +  A+R 
Sbjct: 60  YGATRAEARQLVSHGAIEVNGKRVTIASYQVRAEDVVAVREKSRKQVRIQSSLEVAAQRG 119

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +++ V+   M   F R+P     +     +  +LVVE YS+
Sbjct: 120 FVDWVEVDTAKMSGLFKRVPER---IDLSADINESLVVELYSK 159


>gi|118577548|gb|ABL07140.1| small ribosomal protein 4 [Peperomia puteolata]
          Length = 183

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K PV+  S    L  Q R  K S + ++L  KQK++ +YG + E++     + A 
Sbjct: 1   PGLTSKRPVSESS----LRSQPRYGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNG  V+I SYRCK  
Sbjct: 56  KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  +   K    V  +   A R ++P++++++         +I +S       + +  
Sbjct: 116 DIITTRNAQKSKVLVQNSMDSASREELPKHLTLDSSQYKGIVNQIINSK---WVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|67035750|gb|AAY62806.1| small ribosomal protein subunit 4 [Pleurorthotrichum chilense]
          Length = 191

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNRQKSQDIITKNIDFYQKYKIPNHLTYNSLEKNGFVNQI---LDREL 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67036020|gb|AAY62936.1| small ribosomal protein subunit 4 [Scorpiurium deflexifolium]
          Length = 190

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNMEFHQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|262192922|gb|ACY30477.1| small ribosomal subunit protein 4 [Pohlia crudoides]
          Length = 188

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +     ++  +P +++ N  N      +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|32401763|gb|AAP80870.1| small ribosomal protein 4 [Pinus wallichiana]
          Length = 191

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 7/195 (3%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K P N +          RK   S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLKTLPGLTSKRPKNRKDSMNMNRSSSRK--ISQYRIRLEEKQKLRFHYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + + R++G T   L+  LE RLD I++R    PTI  ARQ VNH H+ VN   V+I S
Sbjct: 58  YVRISRRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  DVI ++ + +  A + +   L +RD +P +++ +         +I  S      
Sbjct: 118 YPCKPQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFINQIIDSK---WI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 SLKINELLVVEYYSR 189


>gi|33413233|emb|CAD86752.1| ribosomal protein small subunit 4 [Hypodontium dregei]
          Length = 192

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 3   RRLGTLPGRTKKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 58

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 59  YVRIARKAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 118

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A +++    +++  VP +++ N         +I   L     
Sbjct: 119 YRCKPQDFITIKDRQKYQAMIIKNLDFSQKTKVPNHLTFNSLEKNGLVNQI---LDQESI 175

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 176 GLKINELLVVEYYSR 190


>gi|15145846|gb|AAK83541.1| rps4 [Tayloria squarrosa]
 gi|42718074|gb|AAS38459.1| rps4 [Tayloria longiseta]
          Length = 189

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAIINKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|12642266|gb|AAK00215.1| rps4 [Discelium nudum]
          Length = 188

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       KSP    S    ++      K S + ++L+ KQK++ +YG I+E++  +  
Sbjct: 1   LGVLPGLTNKSPQLKSST---INPSTSNKKISQYRIRLKEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +V R    PT+  ARQ VNH+H+LVN   V++ S R
Sbjct: 57  RIARKAKGSTGQVLLQILEMRLDNVVXRXGMAPTVPGARQLVNHKHILVNDCIVDVPSDR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  VP +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKDRPKSQAIIIKNIDFSQKSKVPNHLTFDSLXKKGIVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|66866222|gb|AAY57782.1| small ribosomal protein 4 [Leptotheca gaudichaudii]
          Length = 205

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 13/202 (6%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 9   IIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 64

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 65  LNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHIVDI 124

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVRIPS 184
            SYRCK  D I +K + K  A +         D      +P +++ N         +I  
Sbjct: 125 PSYRCKPQDFITIKDRQKSQAIIXXXXXXKNLDFYQKYKIPNHLTYNSLEKKGLVNQI-- 182

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
            L      + +   LVVE+YSR
Sbjct: 183 -LDRESIGLKINELLVVEYYSR 203


>gi|33413257|emb|CAD86763.1| ribosomal protein small subunit 4 [Cinclidotus fontinaloides]
          Length = 190

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I S
Sbjct: 57  YVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +  + K    + +  + +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITINDRQKSQVMITKNVEFSQKSKIPNHLTFNFLEKKGLINQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|42405294|gb|AAS13473.1| rps4 small ribosomal protein [Brymela tutezona]
          Length = 194

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGILPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +  +  ++  +  +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEAIISKNIEFYQKMKISNHLTYNFLEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|222103418|gb|ACM44238.1| small ribosomal protein subunit 4 [Sphagnum subsecundum]
          Length = 185

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 8/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+P +  SY   ++      K S + ++L  KQK++ +YG I+E++     + A
Sbjct: 1   LPGLTSKTPQSKSSY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIA 56

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI SYRCK 
Sbjct: 57  RRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCKP 116

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + K  A +  +   +     P +++++      +  +I          + + 
Sbjct: 117 QDFITIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLKIN 173

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 174 ELLVVEYYSR 183


>gi|328541086|gb|AEB21767.1| ribosomal protein S4 [Zoopsis liukiuensis]
          Length = 186

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 13/187 (6%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            +PKS  N RS            K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 10  LKPKSSYNDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKA 60

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R     TI  ARQ VNH H+ +N   V+I SY C+ GD+
Sbjct: 61  KGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHGHIAINHNIVDIPSYNCEPGDI 120

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I ++ K K  + +++   L +   +P +++ +   +  +  +  +        + +   L
Sbjct: 121 ITIRDKQKSQSVIIKNINLFQNLKIPSHLTFDSIKLCGSINQTIN---CEWINLKINELL 177

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 178 VVEYYSR 184


>gi|118577573|gb|ABL07152.1| small ribosomal protein 4 [Piper dominantinervium]
 gi|118577593|gb|ABL07162.1| small ribosomal protein 4 [Piper longum]
 gi|118577595|gb|ABL07163.1| small ribosomal protein 4 [Piper magnibaccum]
 gi|118577617|gb|ABL07174.1| small ribosomal protein 4 [Piper phuwuaense]
 gi|118577633|gb|ABL07182.1| small ribosomal protein 4 [Piper sp. AC013]
          Length = 184

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + +    V  +   A R ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|283549374|dbj|BAI66349.1| small ribosomal protein 4 [Mnioloma fuscum]
          Length = 188

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTNKILKTKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARRVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY C+ GD+I VK+K K    + +   L ++  +P +++ +   +     +  +  
Sbjct: 117 VNIPSYNCEPGDIITVKKKQKSQFIIGKNLNLFQKLKIPSHLTFDPTELRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWIDLKINELLVV 188


>gi|37992713|gb|AAR06535.1| small ribosomal protein 4 [Trachypodopsis serrulata]
          Length = 190

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|12330474|gb|AAG52774.1| ribosomal protein 4 [Entosthodon drummondii]
          Length = 188

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S       Q    K S + ++L  K K++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLRSSSA----NQSTAKKISQYRIRLEEKXKLRFHYG-ITERQLLNY 55

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRHVLVN   V I SY
Sbjct: 56  VRIARKAKGSTGQVLLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHVLVNXGIVXIPSY 115

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I VK + K  A + + +  +++  VP +++ +         +I   L      
Sbjct: 116 RCKPEDXITVKNRKKSQAIITKNTYFSQKYKVPNHLTFDFTQKKGLVTQI---LDRESXG 172

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 173 LKINELLVVEYYSR 186


>gi|12330514|gb|AAG52794.1| ribosomal protein 4 [Archidium tenerrimum]
          Length = 189

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTSELKSSS---VNQSTSNKKISQYRIRLEEKQKLRXHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  + V++    +++  VP ++++N         +I   L +    
Sbjct: 117 RCKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---LNNDSIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|59803322|gb|AAX07769.1| Rps4 [Targionia hypophylla]
          Length = 194

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E++ 
Sbjct: 3   IIRRLGALPGLINKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQL 58

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N   V+I
Sbjct: 59  LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNIVDI 118

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK  D+I +K + K  + + +     ++  +P ++ ++   +     +        
Sbjct: 119 PSYNCKPKDIITIKDRQKSQSIITKNLNSFQKQKIPNHLILDLMQIKGLVNQTIDR---E 175

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 176 WIYLKINELLVVEYYSR 192


>gi|42556502|gb|AAS19846.1| small ribosomal protein 4 [Schistochila appendiculata]
          Length = 191

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ K K  + +     L ++   P +++ +   +     +         
Sbjct: 117 SYNCELGDIIGIQNKQKSQSMITRNLGLLQKLKTPNHLTFDSTQLRGLVNQKVHR---EF 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|22854737|gb|AAN09788.1| small ribosomal protein 4 [Symblepharis lindigii]
          Length = 186

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRCK
Sbjct: 57  ARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K  A +++    +++  VP +++ N         +I   L      + +
Sbjct: 117 PQDFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|47606924|gb|AAT36382.1| ribosomal protein subunit 4 [Hymenodontopsis bifaria]
          Length = 195

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGALPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L
Sbjct: 117 VDIPSYRCKPQDFITMKDRQKYQAIISKNIDFYQKYKIPNHLTYSSLEKKGLVTQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|7576629|gb|AAF63927.1| ribosomal protein system 4 [Fontinalis dalecarlica]
          Length = 190

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A  ++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARNAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +  ++  +P +++           +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFCKKYKIPNHLTYISLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67035853|gb|AAY62853.1| small ribosomal protein subunit 4 [Hydropogon fontinaloides]
          Length = 195

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I R +G       K+P                 K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRXLGILPGLTNKTPQLKSXS---SXQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKNQQKSEILINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|7576593|gb|AAF63909.1| ribosomal protein system 4 [Pilotrichella flexilis]
          Length = 189

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|66866249|gb|AAY57793.1| small ribosomal protein 4 [Racopilum ferriei]
          Length = 200

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 13/205 (6%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGALPGLTDKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+HVLVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRFGVAPTIPGARQLVNHKHVLVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLAS-----VLEASQLAER-DVPEYISVNHDNMVATFVR 181
           V+I SYRCK  D I +K + K  A        +     ++  +P +++ +         +
Sbjct: 117 VDIPSYRCKPQDFITIKDRQKSQAITXXXXXXKNIDFYQKYKIPNHLTYSSLEKKGFVNQ 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I   L      + +   LVVE+YSR
Sbjct: 177 I---LDRESIDLKINELLVVEYYSR 198


>gi|63100991|gb|AAY33120.1| small ribosomal protein 4 [Henicodium geniculatum]
          Length = 191

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKPETIISKNIEFYQKSKIPNHLTYSXLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|256544532|ref|ZP_05471905.1| 30S ribosomal protein S4 [Anaerococcus vaginalis ATCC 51170]
 gi|256399857|gb|EEU13461.1| 30S ribosomal protein S4 [Anaerococcus vaginalis ATCC 51170]
          Length = 197

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +      S  + R+         ++ K S +G+Q R KQK K 
Sbjct: 1   MAVSRDPIFKRCRSLGISPAYLGYSGESKRTN------SNQRRKLSEYGMQQREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FRS +++A + +G T  NLI   E RLD I +R+    T   ARQ V H H
Sbjct: 55  IYG-VSEKQFRSYYEKASKMQGQTGENLIILCERRLDNIAFRSGLARTRREARQIVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVNG+SV+I S    EGDVIEVK+KS+         +  +   V  ++  + +N+    
Sbjct: 114 LLVNGKSVDIPSILVNEGDVIEVKEKSRSSQLFKAIKETNQSFGVVSWLDSDLENLKVKV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              P+  +D+  PV  +  ++VEFYS+
Sbjct: 174 TNFPTR-EDIDIPV--EERMIVEFYSK 197


>gi|42556476|gb|AAS19833.1| small ribosomal protein 4 [Paraschistochila tuloides]
          Length = 191

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+     SY           K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRSGILPGLTGKTLKPKSSYTD---RSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINKNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKQKSQSMITRNLNLLQKFKIPNHLTFDSTQLQGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|7576557|gb|AAF63891.1| ribosomal protein system 4 [Acroporium pungens]
          Length = 190

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHCMVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L+   
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LERES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   L+VE+YSR
Sbjct: 174 IGLKINELLIVEYYSR 189


>gi|229829399|ref|ZP_04455468.1| hypothetical protein GCWU000342_01489 [Shuttleworthia satelles DSM
           14600]
 gi|229791830|gb|EEP27944.1| hypothetical protein GCWU000342_01489 [Shuttleworthia satelles DSM
           14600]
          Length = 197

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  ++   K  R +G +         + R        +  + K S +G QL+ KQK K 
Sbjct: 1   MAIDKTPVLKRCRSLGLDPVFLGVDKKSKRQP------RNSRRKVSEYGKQLKEKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK FR+ +++AD  +G T  NL++ LESRLD +V+R  +  T   ARQ V+H+ 
Sbjct: 55  IYGVL-EKPFRNYYRQADVKKGQTGENLMTILESRLDNVVFRLGWARTRREARQIVDHKF 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
           V VNGR VNI SY  K GD++E+ +K K L  + +  +    R +P+++  + +N+ AT 
Sbjct: 114 VAVNGRKVNIPSYLVKAGDLVEIVEKKKTLQRMKDIVEVTGGRMIPDWLEADTENLKATV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P+  +     V +    +VE YS+
Sbjct: 174 KSLPTRDQ---IDVPVDEMQIVELYSK 197


>gi|197131482|gb|ACH47259.1| ribosomal protein S4 [Geranium carolinianum]
          Length = 204

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 13/209 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+GE      + P +           R+K + +Y+   L  KQ+++ 
Sbjct: 1   MSRYRGPRFKKIRRLGELPGLTTRIPKDKTQPF------RKKREKNYYQSCLHEKQRIRF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 55  HYG-LTERQLLQYVRIAVKAKGITGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVA 177
           +LVNGR V+I SYRCK  D+I  ++K K    +    + +   ++ +P++++        
Sbjct: 114 ILVNGRMVDIPSYRCKPRDIITAREKEKSRTLIQNYLESSLRKKKKLPDHLTRYPLQYKG 173

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I          + ++  ++V +YSR
Sbjct: 174 LVNQIIDRK---SVGLKIEELVLVGYYSR 199


>gi|184127951|gb|ACC67875.1| ribosomal protein small subunit 4 [Marattia laxa]
 gi|184127953|gb|ACC67876.1| ribosomal protein small subunit 4 [Marattia laxa]
          Length = 199

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+ +      K+  + ++       Q    K S + ++L AKQ+++  +G ++E
Sbjct: 1   RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183
           V+I SYRCK  D+I V+ ++     V +  +   +D +PE+++++    +       RI 
Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDKIPEHLTLSSLEDNKPQGFVNRIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197


>gi|63100997|gb|AAY33123.1| small ribosomal protein 4 [Herpetineuron toccoae]
          Length = 194

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---XNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37992667|gb|AAR06512.1| small ribosomal protein 4 [Ptychomnion ptychocarpon]
          Length = 194

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K +      + + +   ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFIIIKNQQNFEIVINKNTDFYQKYKIPNHLTYSSLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|42794718|gb|AAS45754.1| Rps4 [Thibaudia inflata]
          Length = 211

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 106/215 (49%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K K S + ++L+ KQK 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKKKSQYHIRLQEKQKW 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG + E+      + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LPERXLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP +++ N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTXN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|34147961|gb|AAQ62557.1| ribosomal protein S4 [Tetrastylis ovalis]
          Length = 180

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
            R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 13  SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVRIAAKAKGPTGPVLLQLLEMRLDNI 71

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-Q 158
           ++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I VK + K    +  +   
Sbjct: 72  LFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDLITVKDEQKSKDMIQNSLDS 131

Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  +P++++++         +I  S       + +   LVVE+YSR
Sbjct: 132 FPQEKLPKHLTLDPFQYKGLVNQIIDSK---WVGLQINELLVVEYYSR 176


>gi|32892082|gb|AAP88980.1| ribosomal protein S4 [Passiflora haematostigma]
 gi|74273095|gb|ABA01247.1| ribosomal protein S4 [Passiflora rhamnifolia]
          Length = 183

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K GD+I VK + K    +  +     ++ +P+++++       +  +I  S       + 
Sbjct: 113 KPGDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLYRSQYKGSVNKIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|32401799|gb|AAP80888.1| small ribosomal protein 4 [Calycanthus chinensis]
          Length = 184

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RSGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + +  A +       +  ++P++++           +I  S       + + 
Sbjct: 116 RDIITTRDEQRSRALIQNYLDSPSHEELPKHLTFQPSQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|67035815|gb|AAY62838.1| small ribosomal protein subunit 4 [Anomodon viticulosus]
          Length = 189

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|197131492|gb|ACH47264.1| ribosomal protein S4 [Pelargonium cotyledonis]
          Length = 229

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 27/230 (11%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYG--------------PGLHGQRRKSKPS 46
           MS+    + KI  R+        K P + +                           K S
Sbjct: 1   MSRYRGPRQKIINRLRSLPGLTSKQPRDNKQPRVVSDPSDVSDPRVEKDPRNPPPSKKKS 60

Query: 47  YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
            + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD  ++R    
Sbjct: 61  QYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMA 119

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERD 163
            TI  ARQ VNHRH+LVN R V+I SYRCK  D+I  ++K K  A +      +   ++ 
Sbjct: 120 STIPQARQLVNHRHILVNNRIVDIPSYRCKPRDIISAREKEKSRALIQNYLDSSAKNQKA 179

Query: 164 VPEYISVNH-------DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P ++ +NH       D +  +  +I    + V     ++  LVVE+YSR
Sbjct: 180 LPHHLILNHRLSDDPRDLLKGSVKQIIDR-EGVGLK-EIKELLVVEYYSR 227


>gi|46811008|gb|AAT01822.1| small ribosomal protein 4 [Haplomitrium blumei]
          Length = 193

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 7/195 (3%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G  L G     + +RS         +K   S + ++L  KQK++ +YG ++E++  
Sbjct: 4   IRRLGT-LPGXTNKVLGSRSGRTDQLIPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+++N ++V+  
Sbjct: 60  RYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHIMINDKTVDAP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
            Y C+  D+I  K   +    + +     +   P ++ ++    V    +I         
Sbjct: 120 GYNCEPRDIITTKNPMESRLGMAKGMDSIQSKKPNHLFIDSSKGVGLVNQIIDR---EWI 176

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 177 SLKINELLVVEYYSR 191


>gi|37992695|gb|AAR06526.1| small ribosomal protein 4 [Symphyodon imbricatifolius]
          Length = 194

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ RR+G       K+     S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRLIRRLGTLPGLTNKTSQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|22854731|gb|AAN09785.1| small ribosomal protein 4 [Paraleucobryum longifolium]
          Length = 187

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I ++ + K  A +++    +++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIEDRQKSQAMIIKNIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|37683562|gb|AAQ98832.1| small ribosomal protein 4 [Pogonatum proliferum]
          Length = 188

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    P+I  ARQ VNH+H+L+N   VNI SYR
Sbjct: 57  RIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPSIPGARQLVNHKHILINDYIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LNRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|33413249|emb|CAD86759.1| ribosomal protein small subunit 4 [Calymperes palisotii subsp.
           richardii]
          Length = 192

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K P    S    ++      K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGTLSGLTNKIPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY+CK  D I +K + K    +++    + +  +P +++ N         +I   L   
Sbjct: 117 PSYQCKPQDFITIKDQQKYQTMIVKNINFSPKYKIPSHLTFNSVEKKGLVNQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|39546755|gb|AAR28104.1| small ribosomal protein 4 [Andreaea wilsonii]
 gi|63191769|gb|AAY34844.1| small ribosomal protein subunit 4 [Andreaea wilsonii]
          Length = 191

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSGY---MNQFISNKKMSQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RL+ I++R     TI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  KYVRIARRAKGSTGQILLQLLEMRLNNIIFRLGMASTIPGARQLVNHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A +++    +++  +P ++  N         +I        
Sbjct: 117 SYRCKPQDFITIKDRQKSQAIIIKNIDCSQKYKIPNHLIFNSLQKKGLINQIIDR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|12330458|gb|AAG52766.1| ribosomal protein 4 [Andreaeobryum macrosporum]
          Length = 189

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++    
Sbjct: 1   RLGVLPGLTNKTSQLKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+L+N R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNVIFRLGLAPTIPGARQLVNHRHILINNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +    +++  +P ++++N      +  +I          
Sbjct: 117 RCKPQDFITIKDRQKSRAIITKNMDCSQKYKIPNHLTLNSLEKKGSVNQIIDR---ESLG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|12330540|gb|AAG52807.1| ribosomal protein 4 [Meesia uliginosa]
 gi|42718106|gb|AAS38475.1| rps4 [Meesia triquetra]
          Length = 188

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LNRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|20531090|gb|AAM27366.1| ribosomal protein 4 [Diphyscium longifolium]
          Length = 192

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGALPGLTSKTPQLKSSS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +    +++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDRQKSQNIIGKNLDFSQKYKIPNHLTFDSLEKKGLVNQI---LDHE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   L  E+YSR
Sbjct: 174 SSGLKINELLXXEYYSR 190


>gi|78102707|gb|ABB21567.1| small ribosomal protein 4 [Plagiochila parvifolia]
          Length = 189

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIIIIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --ELIDLKINELLVVE 189


>gi|33413229|emb|CAD86750.1| ribosomal protein small subunit 4 [Dialytrichia mucronata]
          Length = 190

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKIPHLKSSST---NQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I S
Sbjct: 57  YVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +  + K    + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|32401824|gb|AAP80900.1| small ribosomal protein 4 [Rubus odoratus]
          Length = 184

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKKP----RAGNDLRTQSRPGKKSQYRIRLEEKQKLRFHYG-LTEQQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + K  A +      +   ++P++++++         +I  S       + + 
Sbjct: 116 RDIITXRDEQKSKALIQNHLDSSPPEELPKHLTLHPLQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|12330542|gb|AAG52808.1| ribosomal protein 4 [Meesia triquetra]
 gi|42718104|gb|AAS38474.1| rps4 [Meesia uliginosa]
          Length = 189

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNLEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|293634007|gb|ADE60383.1| ribosomal protein subunit 4 [Notoligotrichum trichodon]
          Length = 188

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVTHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNFLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|16565355|gb|AAL26196.1|AF313589_1 small ribosomal protein 4 [Danaea elliptica]
 gi|184127921|gb|ACC67860.1| ribosomal protein small subunit 4 [Danaea elliptica]
          Length = 198

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 11/203 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+ +      K+  +  S    +       K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKLIRRLKDLPGLTTKTLKSKESQ---IAMDPASKKISQYCIRLEAKQRLRFNYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    P+I AARQ VNHRH+LVN R 
Sbjct: 57  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRL 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISV---NHDNMVATFVRIP 183
           V+I SYRCK  D+I V+ ++   + V  + +   +D +PE+++      D       +I 
Sbjct: 117 VDIPSYRCKPKDIINVRNQTNSQSLVKRSLESLNKDKIPEHLTFSLLEDDKPQGLVNKIV 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 177 TRD---SIGLNINELLVVEYYSR 196


>gi|78102653|gb|ABB21540.1| small ribosomal protein 4 [Plagiochila sciophila subsp. echinata]
          Length = 189

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S +  +L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTFKSKSSY---IDRSTPNKKVSQYRXRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  + R    PTI  ARQ VNH H+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTILRLGMSPTIPGARQLVNHGHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++    
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMIDR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   L VE
Sbjct: 176 --EWINLKINEVLXVE 189


>gi|67036022|gb|AAY62937.1| small ribosomal protein subunit 4 [Rhynchostegium serrulatum]
 gi|67036024|gb|AAY62938.1| small ribosomal protein subunit 4 [Steerecleus serrulatus]
          Length = 194

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ +NHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLINHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P ++  +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLIYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|33413197|emb|CAD86734.1| ribosomal protein small subunit 4 [Kiaeria glacialis]
          Length = 185

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G      + +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPHLKSSSINQ--STSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR VNI SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNGRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  VP +++ N         +I   L      + +  
Sbjct: 118 DFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|7576595|gb|AAF63910.1| ribosomal protein system 4 [Hygroamblystegium tenax]
          Length = 188

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576579|gb|AAF63902.1| ribosomal protein system 4 [Thuidium delicatulum]
          Length = 190

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+          ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTSQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67035817|gb|AAY62839.1| small ribosomal protein subunit 4 [Haplohymenium triste]
          Length = 191

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPRLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67036018|gb|AAY62935.1| small ribosomal protein subunit 4 [Eurhynchiella acanthophylla]
          Length = 194

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTSKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNYCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|7576561|gb|AAF63893.1| ribosomal protein system 4 [Pseudoscleropodium purum]
          Length = 189

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNMEFYQKYKIPNHLNYSFLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|37992525|gb|AAR06441.1| small ribosomal protein 4 [Garovaglia compressa]
          Length = 194

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKLIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I VK +      + +     ++  +P +++           +I   L 
Sbjct: 117 DIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67036034|gb|AAY62943.1| small ribosomal protein subunit 4 [Stenocarpidiopsis salicicola]
          Length = 194

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTXKTPQLKSXS---INQSTSNKKXSQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNBXIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEXIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|74273229|gb|ABA01314.1| ribosomal protein S4 [Adenia keramanthus]
          Length = 185

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G P     +RS          + K S + ++L+ KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLPSKSPKSRSAFQNQS----RCKKSQYSIRLQEKQKLRFHYG-LTERQLLKYVRIAA 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R V+I +YRCK  
Sbjct: 58  KAKGPTGQVLLQLLEMRLDNMLFRLGMASTIPQARQLVNHRHILVNSRIVDIPNYRCKPR 117

Query: 139 DVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I VK + K    +  +     +  +P++++++         +I          + +  
Sbjct: 118 DLITVKDEQKSKDMIQNSLASFPQEKLPKHLTLDPLQYKGLVNQIIDRK---WVGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|167749411|ref|ZP_02421538.1| hypothetical protein EUBSIR_00365 [Eubacterium siraeum DSM 15702]
 gi|167657583|gb|EDS01713.1| hypothetical protein EUBSIR_00365 [Eubacterium siraeum DSM 15702]
 gi|291532117|emb|CBK97702.1| SSU ribosomal protein S4P [Eubacterium siraeum 70/3]
 gi|291558143|emb|CBL35260.1| SSU ribosomal protein S4P [Eubacterium siraeum V10Sc8a]
          Length = 198

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  + +G +      S    R           + K S +G+QL+ KQK+K 
Sbjct: 1   MAVDRQPVLKRCKALGISPMVLGYSKETNRHA-----NANNRKKVSEYGMQLKEKQKLKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   ++ A +  G    NLI  LESRLD +V+R     T   ARQ V H H
Sbjct: 56  IYGVL-EKQFYHYYEMAVKMDGVAGENLIKILESRLDNVVFRMGMAITRREARQLVTHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ V++ SYR K GDV+ V + SK+     +  +    R VP ++ VN + M A  
Sbjct: 115 FTVNGKKVDVPSYRIKPGDVVAVSETSKKSPKFAQIIEQTNGRIVPLWLDVNKEAMTAKV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R  +  +       +  +L++E YS+
Sbjct: 175 TREFNRDE---LDYEIAEHLIIELYSK 198


>gi|7576615|gb|AAF63920.1| ribosomal protein system 4 [Entodon brevisetus]
          Length = 188

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|3098168|gb|AAC15532.1| small ribosomal protein 4 [Bryum stenotrichum]
          Length = 190

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGSLPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +   L ++   P +++ N         +I   L     
Sbjct: 117 YRCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|63101065|gb|AAY33157.1| small ribosomal protein 4 [Horikawaea redfearnii]
          Length = 194

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGELLLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SY+CK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYQCKPQDFITIKNQRKSKTIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LN 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|307828428|gb|ADN95011.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 190

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++    
Sbjct: 2   RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY
Sbjct: 58  VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK GDVI V+ + K  + + +   L ++   P +++++   +  +  +           
Sbjct: 118 SCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WIN 174

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 175 LKINELLVVEYYSR 188


>gi|12642264|gb|AAK00214.1| rps4 [Amblyodon dealbatus]
 gi|42718118|gb|AAS38481.1| rps4 [Amblyodon dealbatus]
          Length = 188

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P  T S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLTSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|58293903|gb|AAW69898.1| small ribosomal protein 4 [Stoneobryum mirum]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSSA---NQLTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I          
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKSKIPNHLTYNFLEKKGFVNQIIDR---ELIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|20531098|gb|AAM27370.1| ribosomal protein 4 [Timmiella crassinervis]
 gi|22854741|gb|AAN09790.1| small ribosomal protein 4 [Timmiella crassinervis]
 gi|33413243|emb|CAD86756.1| ribosomal protein small subunit 4 [Timmiella anomala]
          Length = 186

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK
Sbjct: 57  ARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K  A + +  +  ++  VP +++ N         +I   L      + +
Sbjct: 117 PQDFITIKDRQKSQAIITKNIEFFQKYKVPNHLTFNSLQKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|307828424|gb|ADN95009.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 190

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++    
Sbjct: 2   RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY
Sbjct: 58  VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK GDVI V+ + K  + + +   L ++   P +++++      +  +           
Sbjct: 118 SCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WIN 174

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 175 LKINELLVVEYYSR 188


>gi|218157213|gb|ACK58423.1| ribosomal protein subunit 4 [Atrichum tenellum]
          Length = 188

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A +      +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNRQEFQAIITRNINFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 EINELLVVEYYSR 186


>gi|99640381|emb|CAJ45120.1| putative ribosomal protein S4 gene [Lygodium japonicum]
          Length = 200

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+ +      K+    ++   G     RK   S F ++L AKQ+++  YG  +E
Sbjct: 1   RLKIVRRLKDLPGLTSKTSNPKKTRIDGDPSASRK--TSQFCIRLEAKQRLRFNYGS-TE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A ++ G T    +  LE RLD IV+R    PTI AARQ VNHRH+ VN R 
Sbjct: 58  RQLLRYIRIARKAEGSTGQVSLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIPVNNRI 117

Query: 128 VNIGSYRCKEGDVIEVKQ--KSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRI 182
           V+I SYRCK  D+I  K           +        ++P+++++     D    +   I
Sbjct: 118 VDIPSYRCKPKDIIASKGLLIPSGTLKSIGTESFKRNEIPDHLTLFAAEADQTKGSVNGI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
            +        + +   LVVE+YSR
Sbjct: 178 VNR---ESIHLNINELLVVEYYSR 198


>gi|7576605|gb|AAF63915.1| ribosomal protein system 4 [Trachypus bicolor]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESV 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 SLKINELLVVEYYSR 188


>gi|58293873|gb|AAW69884.1| small ribosomal protein 4 [Orthotrichum affine]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHSIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGVVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|63191809|gb|AAY34864.1| small ribosomal protein subunit 4 [Crumia latifolia]
          Length = 190

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKIPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +  + K    + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESV 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|42556390|gb|AAS19790.1| small ribosomal protein 4 [Aphanolejeunea gracilis]
          Length = 188

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K           L       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTSKISKTK------LDRSTLNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++      TI  ARQ VNH+H+ +N   VNI 
Sbjct: 54  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFSMGMARTIPNARQLVNHKHIFINNYIVNIP 113

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +         
Sbjct: 114 SYNCKAGDIITIKNKEKSQSIINKNINLSQKLQIPNHLTFDSTELRGLINQTIRR---EW 170

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 171 IDLKINELLVVEYYSR 186


>gi|32892088|gb|AAP88983.1| ribosomal protein S4 [Passiflora eichleriana]
 gi|74273173|gb|ABA01286.1| ribosomal protein S4 [Passiflora exura]
          Length = 183

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP     +        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSVF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|157689462|gb|ABV65287.1| ribosomal protein S4 [Datisca cannabina]
          Length = 174

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 5/176 (2%)

Query: 32  YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISF 91
            G  L  Q R  K S + ++L  KQK++ +YG ++E++       A +++G T   L+  
Sbjct: 1   TGSDLKNQARSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVHIAGKAKGSTGQVLLQL 59

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK  D+I  K + K  A
Sbjct: 60  LEMRLDNIIFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCKPRDIITAKDEQKSRA 119

Query: 152 SVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +      +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 LIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WIGLKINELLVVEYYSR 172


>gi|184128039|gb|ACC67919.1| ribosomal protein small subunit 4 [Angiopteris hypoleuca]
 gi|184128063|gb|ACC67931.1| ribosomal protein small subunit 4 [Angiopteris caudatiformis]
 gi|184128073|gb|ACC67936.1| ribosomal protein small subunit 4 [Archangiopteris caudata]
          Length = 198

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 10/202 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ RR+ +      K+  + ++       Q    K S + ++L AKQ+++  +G ++E+
Sbjct: 1   LRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V
Sbjct: 58  QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPS 184
           +I SYRCK  D+I V+ ++     V +  +   +D +PE+++ +    +       RI +
Sbjct: 118 DIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVT 177

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 178 RD---SIGLDINELLVVEYYSR 196


>gi|33413221|emb|CAD86746.1| ribosomal protein small subunit 4 [Dicranoweisia cirrata]
          Length = 185

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  VP +++ N         +I   L      + +  
Sbjct: 118 DFITIKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|3098178|gb|AAC15537.1| small ribosomal protein 4 [Cyrtomnium hymenophyllum]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N  N      +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|17025820|gb|AAL32077.1| ribosomal protein 4 [Syrrhopodon ciliatus]
          Length = 194

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S    ++      K S + ++L  KQK++ +YG ++E+
Sbjct: 1   VKIIRRLGTLSGLTSKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-LTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SY+CK  D I +K + K    +++ +    +   P+++  N         +I   L 
Sbjct: 117 NIPSYQCKPQDFITIKDQQKYQTMIVKNTTFFSKYKTPKHLLFNSVEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|7576541|gb|AAF63883.1| ribosomal protein system 4 [Phyllogonium viride]
          Length = 188

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|257440241|ref|ZP_05615996.1| ribosomal protein S4 [Faecalibacterium prausnitzii A2-165]
 gi|257197275|gb|EEU95559.1| ribosomal protein S4 [Faecalibacterium prausnitzii A2-165]
          Length = 200

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K      K  + +G +    G  K      S     +G  RK +  Y   QL+ KQK+
Sbjct: 1   MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNS-----NGNVRKKQSEY-ASQLKEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + EK+F + +  A+   G T  NL+  +E RLD +V+R  F  T   ARQ V+H
Sbjct: 55  KFIYGVL-EKQFHNAYLRAEARPGKTGENLLQIMECRLDNVVFRLGFAQTRRDARQLVSH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176
            H  VNG+ VNI SY+ K GDVIEV++ S+  A   +    +     +P +++     + 
Sbjct: 114 AHFTVNGKKVNIPSYQVKAGDVIEVRESSRSSAKFAKLVGPEAPVVALPSWLNREAGTLK 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++P    D+ Y V    +L+VE YS+
Sbjct: 174 GVVTKLPER-SDIDYEVA--EHLIVELYSK 200


>gi|12330482|gb|AAG52778.1| ribosomal protein 4 [Tayloria splachnoides]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSNS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRLKSQAIINKNIEFHQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|49182716|gb|AAT57820.1| small ribosomal protein [Haplomitrium hookeri]
          Length = 195

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G +L G     + ++          RK   S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLG-SLPGLTNKVLGSKPGYTDQLISNRK--VSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T H L   LE RLD +++R     TI  ARQ VNHRH+L+N  +
Sbjct: 57  RQLLKYVRIARRAKGSTGHVLSQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILINDEA 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I  Y CK  D+I +K  S+  +   +    ++R   P ++  +    +    +I    
Sbjct: 117 VDIPGYNCKPRDIITLKNTSESRSGSAKDIDFSKRSRTPNHLVFDSSRGMGFVNQIIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWISLKINELLVVEYYSR 193


>gi|160415790|gb|ABX39202.1| small ribosomal protein 4 [Dryptodon patens]
          Length = 188

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  + +++     ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSKSMIIKNMDFYQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|42718076|gb|AAS38460.1| rps4 [Tayloria subglabra]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQESQAIINKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|218157231|gb|ACK58432.1| ribosomal protein subunit 4 [Polytrichum juniperinum]
 gi|293633981|gb|ADE60370.1| ribosomal protein subunit 4 [Dendroligotrichum squamosum]
 gi|293634111|gb|ADE60435.1| ribosomal protein subunit 4 [Polytrichastrum tenellum]
 gi|293634115|gb|ADE60437.1| ribosomal protein subunit 4 [Polytrichastrum xanthopilum]
          Length = 187

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A +      +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|7576617|gb|AAF63921.1| ribosomal protein system 4 [Plagiothecium laetum]
          Length = 188

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|67035841|gb|AAY62847.1| small ribosomal protein subunit 4 [Chionostomum rostratum]
          Length = 192

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + +    + +  +  ++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRQSETIINKNIEFYQKSKIPNHLTYNSLENKGLINQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIDLKINELLVVEYYSR 190


>gi|90970060|gb|ABE02799.1| ribosomal protein S4 [Passiflora gardneri]
          Length = 183

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIPNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|7576539|gb|AAF63882.1| ribosomal protein system 4 [Neorutenbergia usagarae]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P+   S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPLLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKYEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDSESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   L+VE+YSR
Sbjct: 174 GLKINELLIVEYYSR 188


>gi|7576551|gb|AAF63888.1| ribosomal protein system 4 [Brachythecium oxycladon]
          Length = 189

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|86438904|emb|CAJ55414.1| small ribosomal protein 4 [Plagiochila obovata]
          Length = 185

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KIIRRLGALPGLTSKTLESKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+ FLE RLD  ++R    PTI  ARQ VNHRH+ +N   V+
Sbjct: 57  LLKYMRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  ++ +    
Sbjct: 117 IPSYNCEPGDIITIRDKQKSQSAITKNINSFQKVKIPSHLTFDSTQLRGSVNQMINR--- 173

Query: 189 VPYPVIMQPNLV 200
               + +   LV
Sbjct: 174 EWINLKINELLV 185


>gi|37992527|gb|AAR06442.1| small ribosomal protein 4 [Garovaglia elegans]
          Length = 194

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKIPQVRSSS---INQSTSNKKMSQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVSLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  DVI VK +      + +     ++  +P +++           +I   L 
Sbjct: 117 NIPSYRCKPQDVIIVKNEKNSEGVINKDEDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|125662712|gb|ABN50306.1| small ribosomal protein 4 [Ephedra rhytidosperma]
          Length = 206

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 14/211 (6%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60
           S+    + KI RR+        K P   +     +H   R   K S + + L+ KQK++ 
Sbjct: 2   SRYRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175
           +LVN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N    
Sbjct: 117 ILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKSRNRVPHYLTFNLSQN 176

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +I  +       + ++  LV+E+YSR
Sbjct: 177 KGIVNKIIDTKD---LQLKIKEMLVIEYYSR 204


>gi|7576597|gb|AAF63911.1| ribosomal protein system 4 [Campylium chrysophyllum]
          Length = 189

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|11228652|gb|AAG33111.1| small ribosomal protein 4 [Leucoloma humbertii]
 gi|22854721|gb|AAN09780.1| small ribosomal protein 4 [Leucoloma sprengelianum]
          Length = 191

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPELKSNS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R   VPTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIVPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K +       L+ +  +++  VP +++ N         +I        
Sbjct: 117 SYRCKPKDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|118577611|gb|ABL07171.1| small ribosomal protein 4 [Piper ornatum]
          Length = 184

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I    + +    V  +   A R ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTINEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|115531917|ref|YP_784073.1| ribosomal protein S4 [Pelargonium x hortorum]
 gi|122164277|sp|Q06FV8|RR4_PELHO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|112382071|gb|ABI17264.1| ribosomal protein S4 [Pelargonium x hortorum]
          Length = 214

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 12/214 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  +R+G       K P         L   + K K  Y  ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKKIKRLGSLPGLTTKKPPIVVRDPRKLSRPKPKKKSQYR-IRLEEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 60  HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMASTIPQARQLVNHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER---DVPEYISVNHDN--- 174
           +LVNGR V+I SYRCK  D+I  ++K K  A +        +    +P+++ + H +   
Sbjct: 119 ILVNGRIVDIPSYRCKPRDLISGREKEKSKALIQNYLDSTAKRPIPLPKHLLLFHSDDPR 178

Query: 175 --MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  +  +I    +       ++  LV+E+YSR
Sbjct: 179 DLLKGSVKKIIDRKEVGL--KKIKELLVIEYYSR 210


>gi|32892104|gb|AAP88991.1| ribosomal protein S4 [Passiflora edmundoi]
          Length = 183

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +        +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNYLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|22091645|emb|CAC86579.1| small ribosomal protein S4 [Schimperobryum splendidissimum]
          Length = 190

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSEDIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|218157227|gb|ACK58430.1| ribosomal protein subunit 4 [Polytrichastrum alpinum]
 gi|293634073|gb|ADE60416.1| ribosomal protein subunit 4 [Polytrichastrum alpinum]
 gi|293634089|gb|ADE60424.1| ribosomal protein subunit 4 [Polytrichastrum norwegicum]
          Length = 187

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A +      ++   +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|91795207|gb|ABE60884.1| ribosomal protein S4 [Passiflora subrotunda]
          Length = 183

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRLVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK   K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDAQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|37992503|gb|AAR06430.1| small ribosomal protein 4 [Duthiella declinata]
          Length = 191

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 2   RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 58  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 118 YRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVTQI---LDRESI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 GLKINELLVVEYYSR 189


>gi|15145832|gb|AAK83534.1| rps4 [Tetraplodon urceolatus]
          Length = 189

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSKAIISKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|42718108|gb|AAS38476.1| rps4 [Meesia muelleri]
          Length = 189

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKNSQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNLEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37992693|gb|AAR06525.1| small ribosomal protein 4 [Stenodictyon wrightii]
          Length = 194

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKIPELKSSS---ITQSISSKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIVVNDSIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K  A + +     ++  +P Y++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNKKKSEAIISKNIDFYQKIKIPNYLTYNFVEKKGLINQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37548863|gb|AAO32700.1| ribosomal protein 4 [Pogonatum neesii]
          Length = 187

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A + +     ++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNRQESQAIITKNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|12330538|gb|AAG52806.1| ribosomal protein 4 [Neomeesia paludella]
 gi|42718110|gb|AAS38477.1| rps4 [Neomeesia paludella]
          Length = 189

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPKDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKRQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|289599893|gb|ADD12897.1| ribosomal protein S4 [Doliocarpus validus]
          Length = 186

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GSLPGLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K  A +          ++P++++++         +I  S       + 
Sbjct: 116 KPRDIITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|75858238|gb|ABA28693.1| small ribosomal protein 4 [Pleurozia paradoxa]
          Length = 190

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     +Y   +       K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGALPGLTNKTLKLKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A + +G T   L+  LE RLD  ++R   V TI  ARQ VNHRH+L+N   V+I S
Sbjct: 57  YVRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVSTIPGARQLVNHRHILINDNVVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C+ GDVI +K   K  + + +     +R  +P ++  +      +  +          
Sbjct: 117 YNCEPGDVITIKNPEKNKSIITKNINSFQRPKIPNHLVFDSTQFRGSVNKTIDR---EWI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLKINELLVVEYYSR 188


>gi|7576513|gb|AAF63869.1| ribosomal protein system 4 [Forsstroemia trichomitria]
          Length = 189

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +L ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|269218536|ref|ZP_06162390.1| ribosomal protein S4 [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211647|gb|EEZ77987.1| ribosomal protein S4 [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 197

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 9/201 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +  R +G  L  + +  +  R Y PG HG+ R      + ++L+ KQ+++  YG I E +
Sbjct: 2   RQSRSLGIALSPKAERYMQRRPYRPGEHGRGRTKDS-DYSVRLKEKQRLRAQYG-IREAQ 59

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
            R +++EA R+ G +  NL+  LE RLD +V RA F  TI  ARQ V HRH+LV+G+ V+
Sbjct: 60  MRRVWEEARRAEGLSGENLVELLEMRLDALVLRAGFARTIAQARQVVVHRHLLVDGKIVD 119

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD----VPEYISVNHDNMVATFVRIPSS 185
             S+R K G  ++VK +S+       A+Q A RD    VP Y+ V+ + +  T  R P  
Sbjct: 120 RPSFRVKPGQTVQVKPRSQTSPQFHVAAQGAHRDVLPQVPGYLDVDLEKLRFTLTRRPKR 179

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
            +    PVI    +VVE YSR
Sbjct: 180 AE---VPVICDVQMVVEHYSR 197


>gi|42556416|gb|AAS19803.1| small ribosomal protein 4 [Gottschea nuda]
          Length = 191

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRSGILPGLTSKTLKPKSSY---IDRSTANKKISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R   V TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKTKGSTGQVLLQLLEMRLDNTIFRLGMVTTIPGARQLVNHRHILINNNIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K   K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNNKKSQSMITRNLNLLQKFKIPNHLTFDSTQLQGLVNQ---RIHREF 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|11121139|emb|CAC14785.1| ribosomal protein subunit 4 [Hookeria lucens]
          Length = 190

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+ VN   VNI S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGVNDCIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  +  ++   P +++ +         RI   L     
Sbjct: 117 YRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|59803320|gb|AAX07768.1| Rps4 [Symphyogyna undulata]
          Length = 189

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G  L G     + +RS         +K   S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGA-LPGLSYEMIGSRSGYTNQLATNKK--ISQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH++VN  +VNI SY
Sbjct: 57  VRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIIVNDNAVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK  DVI +K + +  + + +   L  ER +P +++ +      +  +I          
Sbjct: 117 NCKPQDVITIKDRRESQSIITKNINLFRERKIPNHLTFDSTRFCGSVNQIIDR---EWIS 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|47606898|gb|AAT36369.1| ribosomal protein subunit 4 [Garovaglia subelegans]
          Length = 195

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           +  I RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVXIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T    +   E+RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKTKGSTGEVSLQLPETRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I VK +      + +     ++  +P +++           +I   L
Sbjct: 117 VNIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|184128019|gb|ACC67909.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128035|gb|ACC67917.1| ribosomal protein small subunit 4 [Angiopteris rapensis]
 gi|184128059|gb|ACC67929.1| ribosomal protein small subunit 4 [Angiopteris sp. China]
          Length = 198

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 10/202 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            ++ RR+ +      K+  + ++       Q    K S + ++L AKQ+++  +G ++E+
Sbjct: 1   LRLIRRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V
Sbjct: 58  QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPS 184
           +I SYRCK  D+I V+ ++     V +  +   +D +PE+++++    +       RI +
Sbjct: 118 DIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVT 177

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 178 RD---SIGLDINELLVVEYYSR 196


>gi|3098238|gb|AAC15567.1| small ribosomal protein 4 [Mniodendron dendroides]
          Length = 189

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTAQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +     ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNLDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|74273175|gb|ABA01287.1| ribosomal protein S4 [Passiflora galbana]
 gi|74273183|gb|ABA01291.1| ribosomal protein S4 [Passiflora mucronata]
          Length = 183

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRLVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|42718068|gb|AAS38456.1| rps4 [Brachymitrion cochabambae]
          Length = 189

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKTSQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|42794650|gb|AAS45722.1| Rps4 [Disterigma ovatum]
          Length = 211

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K        Q   KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFVKKKKXXXXXXXQ--EKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++ ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTXRQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+ L   S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIENSFQNLFDLPSRKRKRNRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|77019171|emb|CAH60191.1| chloroplast 30S ribosomal protein S4 [Grimmia fuscolutea]
          Length = 187

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  + +++    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|37992517|gb|AAR06437.1| small ribosomal protein 4 [Floribundaria aurea]
          Length = 190

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T    +   E R D +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVSLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|12642208|gb|AAK00186.1| rps4 [Diphyscium foliosum]
          Length = 189

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G        +P    +    ++      K S + ++L  KQK++ +YG I+E++    
Sbjct: 1   RLGALPGLTIXTPQLKSNS---INQSASNKKISQYRIRLEEKQKLRFHYG-ITERQLLXY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ V+HRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVHHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RC   D I +K++ K    +++   L+++  +P +++ N         +I   L      
Sbjct: 117 RCXPQDFITIKERQKSQGIIVKNMDLSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|28194713|gb|AAO33618.1|AF480973_1 ribosomal protein S4 [Leptodontium flexifolium]
          Length = 190

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    +     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKIPHLKSTST---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I S
Sbjct: 57  YVRVARKAKGSTGLILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +  + K    + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDCITINDRKKSQIMITKNIDFSQKSKIPHHLAFNSLEKKGLINQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|307828396|gb|ADN94996.1| small ribosomal protein 4 [Fossombronia truncata]
 gi|307828419|gb|ADN95007.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 189

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY
Sbjct: 57  VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK GDVI V+ + K  + + +   L ++   P +++++      +  +           
Sbjct: 117 SCKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|15145840|gb|AAK83538.1| rps4 [Brachymitrion moritzianum]
          Length = 189

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLKKQGFINQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|12642212|gb|AAK00188.1| rps4 [Theriotia lorifolia]
          Length = 186

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 10/193 (5%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S            K S + ++L  KQK++ +YG I+E++     
Sbjct: 1   LGALPGLTSKTPQLKSSSI-----NASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYV 54

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SY 
Sbjct: 55  RIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNERIVNIPSYH 114

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  + +++    +++  +P +++ +         ++   L      +
Sbjct: 115 CKPQDFITIKDRQKSQSIIVKNMDFSQKYKIPNHLTFDSLEKKGLVNQV---LDREYIGL 171

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 172 KINELLVVEYYSR 184


>gi|269991304|emb|CAX12488.1| 30S ribosomal protein S4 [Fucus vesiculosus]
          Length = 202

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +    + KI +++GE L G  +  +  ++       Q++++K S + ++L  KQK++ 
Sbjct: 1   MVRYRGPRIKIIKKLGE-LPGLTRKAIKKKNV-----NQKKETKASAYKIRLNEKQKLRY 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG I+E +  S  KEA R +G T   L+  LE RLD I++R    PTI AARQ VNH H
Sbjct: 55  NYG-ITESQLLSYVKEARRRKGLTGFLLMQLLEMRLDNIIFRLGLAPTIPAARQIVNHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ----LAERDVPEYISVNHDNMV 176
           VL+N + VNI S++C+  D+I    KSK    +   S     L ++    ++  +  ++ 
Sbjct: 114 VLINNKKVNIPSFQCRPKDIISFSSKSKTNNLLKINSSEPNHLTDKVSTSHLEFDKQSLT 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A    + +          +   LV+E+YSR
Sbjct: 174 AKINNLVNRKD---LRFKINDMLVIEYYSR 200


>gi|118577635|gb|ABL07183.1| small ribosomal protein 4 [Piper wichmannii]
          Length = 183

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  
Sbjct: 56  KAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  + + +    V  +   A R ++P++++++         +I  S       + +  
Sbjct: 116 DIITTRNEQRSKVLVQNSMDFASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|146261549|gb|ABQ15084.1| ribosomal protein S4 [Aphanopetalum resinosum]
          Length = 184

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  K K++ +YG ++E++       A
Sbjct: 1   LPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKXKLRFHYG-LTERQLLKYVHIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  K + K  A +      +   ++P++++++         +I  +       + + 
Sbjct: 116 QDIITAKDQQKSRAXIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDNK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|7576661|gb|AAF63943.1| ribosomal protein system 4 [Plagiothecium cavifolium]
          Length = 190

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L   LE R D +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLSQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|46486536|gb|AAS98704.1| ribosomal protein subunit 4 [Rhizogonium distichum]
          Length = 195

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K      S    +       K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGTLPGLTNKILQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLINQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|67035612|gb|AAY62737.1| small ribosomal protein subunit 4 [Dicranella heteromalla]
          Length = 190

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPRLTNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARKTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  D I +K + K  A + +   L+++  VP +++ N         +I   L     
Sbjct: 117 YHCKPQDFITIKDREKSQAMITKNVDLSQKYKVPNHLTFNFLEKKGLVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|125662716|gb|ABN50308.1| small ribosomal protein 4 [Ephedra sp. Tibet-5]
          Length = 206

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 14/211 (6%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60
           S+    + KI RR+        K P   +     +H   R   K S + + L+ KQK++ 
Sbjct: 2   SRYRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175
           +LVN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N    
Sbjct: 117 ILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQN 176

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +I  +       + ++  LV+E+YSR
Sbjct: 177 KGIVNKIIDTKD---LQLKIKEMLVIEYYSR 204


>gi|184127927|gb|ACC67863.1| ribosomal protein small subunit 4 [Danaea nodosa]
          Length = 199

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+ +      K+  +  S            K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKLIRRLKDLPGLTMKTLKSKESQI--AMDPSASKKISQYCIRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    P+I AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYIS---VNHDNMVATFVRIP 183
           V+I SYRCK  D+I V+ ++   + V    +  ++D +PE+++   +  D       +I 
Sbjct: 118 VDIPSYRCKPKDIINVRNQTNSHSLVKRNLESLDKDKIPEHLTLSLLEDDKPQGLVNKIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197


>gi|37992513|gb|AAR06435.1| small ribosomal protein 4 [Euptychium setigerum]
          Length = 194

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKIPQVKSGS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK        + +     ++  +P +++           +I   L 
Sbjct: 117 NIPSYRCKPQDXIIVKNXKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|63101021|gb|AAY33135.1| small ribosomal protein 4 [Pseudotaxiphyllum elegans]
          Length = 189

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSCLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|118577647|gb|ABL07189.1| small ribosomal protein 4 [Macropiper timothianum]
          Length = 183

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  
Sbjct: 56  KAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  + + +    V  +   A R ++P++++++         +I  S       + +  
Sbjct: 116 DIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|307326779|ref|ZP_07605971.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113]
 gi|306887542|gb|EFN18536.1| ribosomal protein S4 [Streptomyces violaceusniger Tu 4113]
          Length = 203

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K K  R +G  L  +       R Y PG HG+ RK + S + ++L  KQ+++  Y  IS
Sbjct: 6   PKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRK-QTSDYKVRLLEKQRLRAQYD-IS 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++    +  A ++ G T   L+  LE RLD +V R+    TI+ +RQ V H H+ VNGR
Sbjct: 64  ERQMARAYDRARKAGGKTGEALVIELERRLDALVLRSGIARTIYQSRQMVTHGHIEVNGR 123

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVATFVRIP 183
            V+  S+R +  DV+ V+++S+       A +     + + P Y+ VN   +     R P
Sbjct: 124 KVDKPSFRVRPDDVVMVRERSRDKHPFQVAREGGYAPDGETPRYLQVNLMALAFRLDRDP 183

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +  +    PVI    LVVE+Y+R
Sbjct: 184 NRKE---IPVICDEQLVVEYYAR 203


>gi|32401814|gb|AAP80895.1| small ribosomal protein 4 [Viburnum betulifolium]
          Length = 184

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + +      +  +   +   ++P++++++         +I  S       + + 
Sbjct: 116 RDIITARDEQNSRVLIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|58293889|gb|AAW69891.1| small ribosomal protein 4 [Leptodontiopsis fragilifolia]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTXKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I  Y
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPGY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LDRELID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|160942871|ref|ZP_02090110.1| hypothetical protein FAEPRAM212_00347 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445772|gb|EDP22775.1| hypothetical protein FAEPRAM212_00347 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103949|emb|CBL01493.1| SSU ribosomal protein S4P [Faecalibacterium prausnitzii SL3/3]
          Length = 200

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K      K  + +G +    G  K      S     +G  RK +  Y   QL+ KQK+
Sbjct: 1   MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNS-----NGNVRKKQSEY-ASQLKEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + EK+F + + +A+   G T  NL+  +E RLD +V+R  F  T   ARQ V+H
Sbjct: 55  KFIYGVL-EKQFHNAYLKAESRPGKTGENLLQIMECRLDNVVFRLGFAQTRRDARQLVSH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176
            H  VNG+ VNI SY+ K GDVIEV++ S+  A   +   ++     +P +++    ++ 
Sbjct: 114 AHFTVNGKKVNIPSYQVKAGDVIEVRESSRSSAKFAKLTGAEAPVVALPAWLNRETGSLK 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++P    D+ Y V    +L+VE YS+
Sbjct: 174 GVVAKLPER-SDIDYEVA--EHLIVELYSK 200


>gi|74273247|gb|ABA01323.1| ribosomal protein S4 [Malesherbia linearifolia]
          Length = 187

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 10/193 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G     Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRP----RAGSAFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAAKAKGPTGRVLLQLLEMRLDNTLFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K + K    +  +     +   +P++++++         +I  S       +
Sbjct: 116 KPRDLITAKDEQKSKDMIQNSLDSFPQGGKLPKHLTLHPFQYKGLVNQIIDSK---WVGL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|80974164|gb|ABB53775.1| small ribosomal subunit protein 4 [Hampeella alaris]
          Length = 196

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SYRCK  D I VK        + +    +++  +P ++  +         +I   L
Sbjct: 117 VNIPSYRCKPQDFIIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIGLKINELLVVEYYSR 193


>gi|37992469|gb|AAR06413.1| small ribosomal protein 4 [Crossomitrium rotundifolium]
          Length = 194

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH++VN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVVNDFLV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K K K    + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKSQDFITIKNKKKSKTIISKNIEFYQKSKIPNHLTYNFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|12330558|gb|AAG52816.1| ribosomal protein 4 [Catagonium nitens]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A ++ G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRXARKAXGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKXQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|47606920|gb|AAT36380.1| ribosomal protein subunit 4 [Pterogonium gracile]
          Length = 200

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 13  LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 68

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 69  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 128

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ N         +I   L      +
Sbjct: 129 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIGL 185

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 186 KINELLVVEYYSR 198


>gi|20531083|gb|AAM27363.1| ribosomal protein 4 [Diphyscium mucronifolium]
          Length = 186

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P         ++      K S + ++L  KQK++ +YG I+E++     + 
Sbjct: 1   ALPGLTSKTPQLR---ASSINQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK
Sbjct: 57  ARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    +++    +++  +P +++++         +I   L      + +
Sbjct: 117 PQDFITIKDRQKSQDIIVKNMDFSQKYKIPNHLTLDSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|63101019|gb|AAY33134.1| small ribosomal protein 4 [Heterophyllium affine]
          Length = 190

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHLLVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|42405292|gb|AAS13472.1| rps4 small ribosomal protein [Benitotania elimbata]
          Length = 193

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 8/198 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++
Sbjct: 1   KIIRRLGVLPGLTNKIPQVKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD ++++     TI  ARQ VNHRH+LVN   V+
Sbjct: 57  LLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFQLGMATTIPGARQLVNHRHILVNNFIVD 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + K    + + ++  ++  +P +++ +         +I   L  
Sbjct: 117 IPSYRCKPQDFITIKNQRKSEVIINKNTEFYKKYKIPNHLTYSSLEKKGLVNKI---LDR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESIGLKINELLVVEYYSR 191


>gi|37548849|gb|AAO32693.1| ribosomal protein 4 [Oligotrichum hercynicum]
          Length = 187

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  + I +K + +  A +      +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQEFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|58293879|gb|AAW69886.1| small ribosomal protein 4 [Ulota phyllantha]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---VNQSTSNRKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH H++VN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHXHIIVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTXNSXEKKGFVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|118577631|gb|ABL07181.1| small ribosomal protein 4 [Piper yinkiangense]
          Length = 184

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + +    V  +   A R ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTRNEQRSKVLVPNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|22854727|gb|AAN09783.1| small ribosomal protein 4 [Oreas martiana]
          Length = 185

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  
Sbjct: 58  KAKGSTGKVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I VK + K  A +++    +++  VP +++ N         +I   L      + +  
Sbjct: 118 DFITVKNRQKSQAMIIKNVDFSQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|15145836|gb|AAK83536.1| rps4 [Voitia nivalis]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSST---NQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R V I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVXIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  + +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFSQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYS 205
           + +   LVVE+YS
Sbjct: 174 LKINELLVVEYYS 186


>gi|12330530|gb|AAG52802.1| ribosomal protein 4 [Thelia asprella]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETVISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|74273105|gb|ABA01252.1| ribosomal protein S4 [Passiflora kawensis]
          Length = 183

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     ++ +P++++++      +  +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLHRSQYKGSVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|42718086|gb|AAS38465.1| rps4 [Tayloria dubyi]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKAPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRVARKAKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  VP ++  N         +I   L      
Sbjct: 117 RCKPQDSITIKDRQKSQTIINKNIEFNQKYKVPNHLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|50235352|gb|AAT70709.1| Rps4 [Brachythecium appleyardiae]
          Length = 193

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L   
Sbjct: 117 PSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              +     LVVE+YSR
Sbjct: 174 SIGLKRNELLVVEYYSR 190


>gi|328488168|gb|AEB19897.1| small ribosomal protein 4 [Paraschistochila conchophylla]
          Length = 191

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+     SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRSGVLPGLTSKTLKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQILLQLLEMRLDNTIFRLGMATTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ N   +     +         
Sbjct: 117 SYNCELGDIIAIKNKQKSESMITRNLNLLQKFKIPNHLTFNSTQLQGLVNQKIHR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
               +   LVVE+YSR
Sbjct: 174 INFKINELLVVEYYSR 189


>gi|126643072|ref|YP_001086056.1| 30S ribosomal protein S4 [Acinetobacter baumannii ATCC 17978]
          Length = 140

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 4/143 (2%)

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           + E++F + +KEA R +G T  NL+  LESRLD +VYR  F  T   ARQ V+HR + +N
Sbjct: 1   MLERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQLVSHRSITLN 60

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIP 183
           GR VNI S + K GDVI V + +KQ   +  A +L A+R +P +I V+H  +  TF   P
Sbjct: 61  GRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIEVDHSKLEGTFKAAP 120

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                   P  +  +L+VE YS+
Sbjct: 121 DRSD---LPAEINESLIVELYSK 140


>gi|307828390|gb|ADN94993.1| small ribosomal protein 4 [Fossombronia alata]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY
Sbjct: 57  VRVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK GDVI V+ + K  + + +   L ++   P +++++   +  +  +           
Sbjct: 117 SCKPGDVITVRNRHKSQSIIAKNMSLFQKPRTPNHLTLDSTRLRGSINQTIDRD---WIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|293633991|gb|ADE60375.1| ribosomal protein subunit 4 [Notoligotrichum angulatum]
          Length = 188

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + +  A + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992529|gb|AAR06443.1| small ribosomal protein 4 [Garovaglia powellii var. brevifolia]
 gi|37992533|gb|AAR06445.1| small ribosomal protein 4 [Garovaglia subelegans]
          Length = 194

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK +      + +     ++  +P +++           +I   L 
Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGGINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37683572|gb|AAQ98837.1| small ribosomal protein 4 [Pogonatum pergranulatum]
          Length = 187

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + + L  KQK++ +YG I+E++  +  +
Sbjct: 1   GAXPGLTNKTPQLKSGY---INQTVSNKKISQYRIALEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +    + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNRQESQTIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|32892114|gb|AAP88996.1| ribosomal protein S4 [Passiflora villosa]
 gi|74273221|gb|ABA01310.1| ribosomal protein S4 [Passiflora reflexiflora]
          Length = 183

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPKARSAF-------SRSGKKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE R D I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRWDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S       + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|12642214|gb|AAK00189.1| rps4 [Bryoxiphium norvegicum]
          Length = 186

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   ALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK
Sbjct: 57  ARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K  A +++    +++  VP +++ N         +I   L      + +
Sbjct: 117 PQDFITIKDRQKAQAIIIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDRESINLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|7576529|gb|AAF63877.1| ribosomal protein system 4 [Lepyrodon pseudolagurus]
          Length = 190

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARRAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNVYMVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|63191801|gb|AAY34860.1| small ribosomal protein subunit 4 [Bryoerythrophyllum
           campylocarpum]
          Length = 191

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S     +      K S + ++L  KQK++ +YG I+EK+  
Sbjct: 1   IRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITEKQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|254391328|ref|ZP_05006532.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064]
 gi|294811568|ref|ZP_06770211.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064]
 gi|326440047|ref|ZP_08214781.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064]
 gi|197705019|gb|EDY50831.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064]
 gi|294324167|gb|EFG05810.1| 30S ribosomal protein S4 [Streptomyces clavuligerus ATCC 27064]
          Length = 205

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M  +   K K  R +G  L  +       R Y PG HG+ RK    Y  ++L  KQ+++ 
Sbjct: 1   MPNQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDY-KVRLLEKQRLRA 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            Y +ISE++    +  A ++ G T   L+  LE RLD ++ R+    TI+ ARQ V H H
Sbjct: 60  QY-NISERQMARAYDRARKAEGKTGEALVVELERRLDALLLRSGIARTIYQARQMVVHGH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ---LAERDVPEYISVNHDNMVA 177
           + VNG  V+  S+R +  DV+ V+++S+  +    A +    A+ + P Y+ VN   +  
Sbjct: 119 IEVNGGKVDKPSFRVRPDDVVMVRERSRAKSLFQVAREGGFAADGETPRYLQVNLKALAF 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFY 204
              R P   +    PVI    LVVE+Y
Sbjct: 179 RMDRDPQRKE---IPVICDEQLVVEYY 202


>gi|146261555|gb|ABQ15087.1| ribosomal protein S4 [Corylopsis pauciflora]
          Length = 185

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----RTGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYIRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK
Sbjct: 56  AGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPGARQLVNHRHILVNGRIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  + + K  A +      +   ++P++++++         +I  S       + +
Sbjct: 116 PRDIITARDEQKSTALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|29422387|gb|AAO84589.1| small ribosomal protein 4 [Fleischerobryum longicolle]
          Length = 190

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++   KQK++ +YG I+E++  +
Sbjct: 1   RRLGAXPGLTNKTPQLKSSX---INQSTFNKKISQYRIRXEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNARIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +     ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|47606944|gb|AAT36392.1| ribosomal protein subunit 4 [Rhizogonium novae-hollandiae]
          Length = 195

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E
Sbjct: 1   RVRIIRRLGILPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D I +K + K    + +     ++  +P ++  N         +I   L
Sbjct: 117 VDIPSYRCKPQDFITIKDQQKYQTIISKNINFYQKYKIPNHLIYNSLEKKGLVNQI---L 173

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 174 DRESIDLKINELLVVEYYSR 193


>gi|15145856|gb|AAK83546.1| rps4 [Tayloria hornschuchii]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRLVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRLKSQAIINKNIEFHQKYKIPNHLTYNSVKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|293634041|gb|ADE60400.1| ribosomal protein subunit 4 [Pogonatum macrophyllum]
          Length = 187

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRELIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|157689558|gb|ABV65335.1| ribosomal protein S4 [Stachyurus praecox]
          Length = 185

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P         L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----RSVSDLRNQSRPVKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK
Sbjct: 56  AGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  + + K    +      +   ++P+++++          +I  S       + +
Sbjct: 116 PQDIITARNEQKSRTLIQNYLDSSPHEELPKHLTLPPFQYKGLVNQIIDSK---WVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|3098222|gb|AAC15559.1| small ribosomal protein 4 [Orthotrichum lyellii]
 gi|58293881|gb|AAW69887.1| small ribosomal protein 4 [Ulota hutchinsiae]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|26454646|sp|O47032|RR4_PROWI RecName: Full=Plastid 30S ribosomal protein S4
 gi|5748666|emb|CAB53104.1| 30S ribosomal protein S4 [Prototheca wickerhamii]
          Length = 207

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 15/213 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRK------SKPSYFGLQLRA 54
           MS+    +  I RR+GE L G  K  ++     PG HG ++K      SK S +G++L+ 
Sbjct: 1   MSRYRGPRLPIIRRLGE-LPGFSKK-IDRNHTPPGQHGWKKKASDQKKSKESQYGIRLKE 58

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++  YG I+E++  +  +EA R +G T   L+  LE RLD I+YR  F PTI AARQ
Sbjct: 59  KQKLRYNYG-INERQLINYVREARRRKGSTGEVLLQLLEMRLDNIIYRLGFAPTIPAARQ 117

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHD 173
            +NH H+ VN +++NI SY CK  D+I V         +    Q     ++   +++N +
Sbjct: 118 LINHGHINVNNKNINIPSYICKINDIISV--LKNSQQLIKNYLQNGGISELSTCLNLNKE 175

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + A+   I          + +   LV+E+YSR
Sbjct: 176 KLEASINNIIPRD---LVKLEINELLVIEYYSR 205


>gi|157689406|gb|ABV65259.1| ribosomal protein S4 [Ailanthus altissima]
          Length = 186

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  +   K  A +      +   ++P++++++         +I  S       + 
Sbjct: 116 KPRDIITARDDHKSRALIQNYLDSSHHEELPKHLTLHAFQYKGLVNQIIDSK---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVV +YSR
Sbjct: 173 INELLVVXYYSR 184


>gi|12330522|gb|AAG52798.1| ribosomal protein 4 [Weissia ludoviciana]
          Length = 189

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576601|gb|AAF63913.1| ribosomal protein system 4 [Zelometeorium patulum]
          Length = 190

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D + +K + K    + +  +  ++  +P +++           +I   L    
Sbjct: 117 SYRCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|37992715|gb|AAR06536.1| small ribosomal protein 4 [Trachypus bicolor var. viridulus]
          Length = 189

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +        ++I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVIQI---LDRESVS 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576517|gb|AAF63871.1| ribosomal protein system 4 [Neckera pennata]
          Length = 190

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +L ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|33411990|emb|CAD86725.1| ribosomal protein small subunit 4 [Archidium sp. CCRU]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTFELKSNSVNQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  + V++    +++  VP ++++N         +I   L +    + +  
Sbjct: 118 DFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---LNNESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|42556434|gb|AAS19812.1| small ribosomal protein 4 [Jubulopsis novae-zelandiae]
          Length = 192

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLSSKKLKPKSSY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-VTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ +N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHISINNETVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ + K  + + +      + ++P ++++N   +  +            
Sbjct: 117 SYNCEPGDIITIRNREKSQSIITKNLNSFHKSEIPNHLTLNSTQLRGSINTTIHR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKVNELLVVEYYSR 189


>gi|18920777|gb|AAL82433.1| ribosomal protein system 4 [Plagiothecium piliferum]
          Length = 191

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 4   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 59

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 60  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 119

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  +  ++  +P +++ +         +I   L      +
Sbjct: 120 CKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 176

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 177 KINELLVVEYYSR 189


>gi|168186545|ref|ZP_02621180.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
 gi|169295481|gb|EDS77614.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
          Length = 196

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 7/187 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+K    + K+ RR+G N++G PK+   +     GL G+R+K     +G QL  KQK++ 
Sbjct: 1   MAKMRQPRFKLSRRLGVNIYGHPKAMKRSE----GLKGRRKKMS--DYGSQLLEKQKVRA 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+FR   ++A +S+  T   L+  LE RLD +VYR  F  +I  ARQ VNH H
Sbjct: 55  YYG-VMEKQFRRYVEKAMKSKDVTGDILLKLLECRLDNLVYRIGFANSIRQARQMVNHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG  V+I SY  K GD +E+K+K ++                 YI  ++DN     +
Sbjct: 114 ILVNGSKVDIPSYEVKVGDKVELKEKYRKNEMFFNNFLELRTFELPYIEKDYDNFSGKLI 173

Query: 181 RIPSSLK 187
           R+P+  +
Sbjct: 174 RMPNREE 180


>gi|58293905|gb|AAW69899.1| small ribosomal protein 4 [Sehnemobryum paraguense]
          Length = 189

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSPA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN R VNI SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTISGARQLVNHRHIIVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNINFNQKYKIPNHLTYNSLEKKGFVNQI---LDRELIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|20531117|gb|AAM27379.1| ribosomal protein 4 [Streptopogon calymperes]
          Length = 191

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLSNKIPHLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R     TI  ARQ V+HRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVSHRHILVNDRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +  + K    + +    +++  +P ++  N         +I   L    
Sbjct: 117 SYRCKPQDFITISDRKKSQVIITKNVDSSQKSKIPNHLIFNSLEKKGLINQI---LNQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|37992671|gb|AAR06514.1| small ribosomal protein 4 [Sauloma tenella]
          Length = 194

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   LRIIRRLGVLPGLSNKVPQLRSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITEQ 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K++ K  A + +  +  ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKKQRKSEAIINKNIEFYQKYKIPNHLTYNFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|32401757|gb|AAP80867.1| small ribosomal protein 4 [Zamia pumila]
          Length = 190

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 9/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K P            Q    K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLRVLPGLTNKRP----KSINDPTNQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLL 55

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 56  KYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIP 115

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  DVI V+ + +  A + +   L+++D +P +++++         +I  S     
Sbjct: 116 SYRCKPRDVITVRDQQRSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---W 172

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 173 ISLKINELLVVEYYSR 188


>gi|293634053|gb|ADE60406.1| ribosomal protein subunit 4 [Pogonatum subulatum]
          Length = 187

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A +++    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPKDFIIIKNQQESQAIIVKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|145848879|emb|CAJ91116.1| ribosomal protein S4 [Acrocladium auriculatum]
          Length = 188

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNXKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K K K  A + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|74273191|gb|ABA01295.1| ribosomal protein S4 [Passiflora serratifolia]
          Length = 183

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIARSAF-------SRSGKKSQYCIRLKEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPKGRVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++         +I  S +     + 
Sbjct: 113 KPQDLITVKDEQKSKDMIQNSLDSFPQEKLPKHLTLHPFQYKGLVNQIIDSKR---VGLQ 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|157785978|gb|ABV74163.1| small ribosomal protein 4 [Cyathophorum parvifolium]
          Length = 191

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V+I 
Sbjct: 57  NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + +    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRESETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LNRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|146261571|gb|ABQ15095.1| ribosomal protein S4 [Kalanchoe daigremontiana]
          Length = 186

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLSLASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K   K  A +          ++P++++++         +I  S       + 
Sbjct: 116 KPSDIITAKDDKKSRALIQNYIDSIPHEELPKHLTLHPFQYKGLVNQIIDSK---GVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 173 INELLVVEYYSR 184


>gi|157689444|gb|ABV65278.1| ribosomal protein S4 [Cephalotus follicularis]
          Length = 185

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P      G     Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----RTGSAFRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLFKYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK
Sbjct: 56  AGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRHILVNGHIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I    + K  A +       A  ++P+++++          +I  S       + +
Sbjct: 116 PRDIITATDEQKSRALIQNYLDSSAHEELPKHLTLQPLQYKGLVNQIIDSK---WVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|42556428|gb|AAS19809.1| small ribosomal protein 4 [Hymenophyton flabellatum]
          Length = 191

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L G     +  +S         +K   S + ++L  KQK++ +YG ++E++     
Sbjct: 3   LGA-LPGLSNKMLELKSGYTNQSTANKK--ISQYRIRLEEKQKLRFHYG-LTERQLLKYV 58

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+ +N   V+I SY 
Sbjct: 59  RIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIPINDDMVDIPSYN 118

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  DVI  + + K    +     L ++  +P +++ +      +  ++          +
Sbjct: 119 CKPEDVITTRNRRKSQLIITRNINLFQKQKIPNHLTFDSTQFRGSVNQMIDR---ECINL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 KINELLVVEYYSR 188


>gi|37992561|gb|AAR06459.1| small ribosomal protein 4 [Hypnella pallescens]
          Length = 199

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 8/204 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI RR+G       K P    S    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVKIIRRLGVLPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++V
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   VNI SYRCK  D I +K + K    V +  +  ++  +P +++ N         +I
Sbjct: 117 NNNIVNIPSYRCKPQDFITIKNQGKSDTIVSKNIEFYQKIKIPNHLTYNFLEKKGLIKQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   LVVE+YSR
Sbjct: 177 ---LDRESISLKINELLVVEYYSR 197


>gi|12330516|gb|AAG52795.1| ribosomal protein 4 [Archidium alternifolium]
          Length = 189

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S    +L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTSELKSSS---VNQSTSNXKISQXRXRLEEKQKLRXHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  + V++    +++  VP ++++N         +I ++       
Sbjct: 117 RCKPQDFITIKDRQKSQSMVIKNIDFSQKYKVPNHLTLNSLEKKGLINQIXNND---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|22854725|gb|AAN09782.1| small ribosomal protein 4 [Mesotus celatus]
          Length = 188

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSGS---INQSISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A  ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIAREAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  VP +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|29027174|gb|AAN47149.1| small ribosomal protein 4 [Hymenodontopsis mnioides]
          Length = 188

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +     ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAIIGKNIDFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|118577546|gb|ABL07139.1| small ribosomal protein 4 [Peperomia obtusifolia]
          Length = 183

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 5/185 (2%)

Query: 23  PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82
           P  P         L  Q R  K S + ++L  KQK++ +YG + E++     + A +++G
Sbjct: 1   PGLPSKRPVSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIAGKAKG 59

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
            T H L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK  D+I 
Sbjct: 60  STGHVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHIVDIPSYRCKPRDIIT 119

Query: 143 VKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201
            +   K    V  +   A R ++P+++++          +I  S       + +   LVV
Sbjct: 120 TRNAQKSKVLVQNSMDSASREELPKHLTLESSQYKGIVNQIIDSK---WVGLKINELLVV 176

Query: 202 EFYSR 206
           E+YSR
Sbjct: 177 EYYSR 181


>gi|37992411|gb|AAR06384.1| small ribosomal protein 4 [Aerobryidium aureonitens]
          Length = 189

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37992421|gb|AAR06389.1| small ribosomal protein 4 [Aerolindigia capillacea]
          Length = 190

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D + +K K K    + +  +L ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFVTIKNKRKSENIISKNMELYQKYKIPNHLTYSFLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|118577544|gb|ABL07138.1| small ribosomal protein 4 [Peperomia hoffmannii]
          Length = 184

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K PV+  S    L  Q R  K S + ++L  KQK++ +YG + E++     + A
Sbjct: 1   LPGLTSKRPVSESS----LRSQPRYGKRSQYRIRLEEKQKLRFHYG-LGERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNG  V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGHIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  +   K    V  +   A R ++P++++++         +I +S       + + 
Sbjct: 116 RDIITTRNAQKSKVLVQNSMYSASREELPKHLTLDSSQYKGIVNQIINSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|157689530|gb|ABV65321.1| ribosomal protein S4 [Ochna mossambicensis]
          Length = 182

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRP----RAGSDLRNQSRFGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAAK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 56  AKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I  + + K  A +      + + ++P++++++         +I  S       + +   
Sbjct: 116 IITARDEQKSRAMIQNYLDSSPQEELPKHLTLHTFQYKGLVNQIIDSR---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|42794726|gb|AAS45758.1| Rps4 [Thibaudia pachyantha]
          Length = 211

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG--LQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  +       ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVEKKKXXXXIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     +   ++ G T   L+  L  RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIPGKAXGSTGQVLLQLLXMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I  YRCK  D+I  ++KS+     S      L  R      VP +++ N
Sbjct: 116 RHVLVNGRIIDIPRYRCKPRDIIXAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTXN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|42718064|gb|AAS38454.1| rps4 [Brachymitrion immersum]
          Length = 189

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L+ KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKTSQYRIRLKEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|11121222|emb|CAC14796.1| ribosomal protein subunit 4 [Mielichhoferia macrocarpa]
          Length = 190

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +   L ++   P +++ N         +I   L     
Sbjct: 117 YRCKLEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKNKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|328541072|gb|AEB21760.1| ribosomal protein S4 [Paracromastigum macrostipum]
          Length = 184

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            +PKS  N RS            K S + ++L  KQK++ +YG ++E++     + A R+
Sbjct: 8   LKPKSSYNDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQSLKYVRIARRA 58

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD+
Sbjct: 59  KGSTGQVLLQSLEMRLDNTIFRLGMASTIPGARQLVNHRHIAINNNIVDIPSYNCQPGDI 118

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I ++ K +  + + +   L +   +P +++ +   +  +  +  +        + +   L
Sbjct: 119 ITIRDKQRSQSIITKNVNLFQNLKIPSHLTFDSTKLCGSINQTINR---EWIDLKINELL 175

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 176 VVEYYSR 182


>gi|157689566|gb|ABV65339.1| ribosomal protein S4 [Suriana maritima]
          Length = 182

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 56  AKGSTGQVLLQLLEMRLDNIIFRLGMASTIPQARQLVNHRHILVNGRMVDIPSYRCKPQD 115

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I  + + K  A +        R ++P++++++         +I  S       + +   
Sbjct: 116 IITPRDEQKSRALLQNYLDSPPREELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|50299387|gb|AAT73598.1| small ribosomal protein 4 [Plagiochila renitens]
          Length = 188

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNHDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFDLTQLQGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWINLKINELLVV 188


>gi|12330494|gb|AAG52784.1| ribosomal protein 4 [Orthotrichum alpestre]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H++VN R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D + +K + K    + +     ++  +P +++ N         +I          
Sbjct: 117 RCKPQDFLTIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|22854709|gb|AAN09774.1| small ribosomal protein 4 [Holomitrium borbonicum]
          Length = 186

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTPQLKSGSINQ--STSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ +         +I   L      + +  
Sbjct: 119 DFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|7576655|gb|AAF63940.1| ribosomal protein system 4 [Hypopterygium tamarisci]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNG  V+I S
Sbjct: 57  YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNGYIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LNRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|12330492|gb|AAG52783.1| ribosomal protein 4 [Orthotrichum anomalum]
 gi|58293877|gb|AAW69885.1| small ribosomal protein 4 [Orthotrichum jetteae]
 gi|58293895|gb|AAW69894.1| small ribosomal protein 4 [Muelleriella crassifolia]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H++VN R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I          
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|32401797|gb|AAP80887.1| small ribosomal protein 4 [Platanus x acerifolia]
          Length = 193

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              KSP      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 13  LTTKSP----KAGSDLRNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 67

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+
Sbjct: 68  KGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDI 127

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I  + + K  A +      +   ++P++++++         +I  S       + +   L
Sbjct: 128 ITTRDEQKSRALIQNYLDSSSHEELPKHLTLHSFQYKGLVNQIIDSK---WVGLQINELL 184

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 185 VVEYYSR 191


>gi|42556512|gb|AAS19851.1| small ribosomal protein 4 [Trichotemnoma corrugatum]
          Length = 187

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+     SY   +       K S + ++L  KQK++ ++G ++E++     +
Sbjct: 1   GALPGLTSKTLKPKSSY---IDRSTSTKKVSQYRIRLEEKQKLRFHHG-LTERQLLKYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ ++   V+I SY C
Sbjct: 57  IARKAKGSTGQVLLQLLEMRPDNTIFRLGMASTIPGARQLVNHRHISIDNDIVDIPSYNC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           + G++I VK K K  + + +   L ++  +P +++ +   +     +  S        + 
Sbjct: 117 EPGNIITVKNKQKSQSIIAKNIDLFQKSKIPSHLTFDSTKLQGFVNQTISR---ELVNLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|37992531|gb|AAR06444.1| small ribosomal protein 4 [Dichelodontium nitidum]
          Length = 194

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKLIRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK +      + +     ++  +P +++           +I   L 
Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGGINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|33413177|emb|CAD86724.1| ribosomal protein small subunit 4 [Tridontium tasmanicum]
          Length = 192

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   LIRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRHVLVN R V+I
Sbjct: 57  LNYVRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVLVNNRIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L   
Sbjct: 117 PSYRCKPQDFITINNRKKSQVMIAKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINELLVVEYYSR 190


>gi|67035945|gb|AAY62899.1| small ribosomal protein subunit 4 [Dozya japonica]
          Length = 194

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       ++     S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNRTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNH+HVL+N   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHKHVLINDSMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYR K  D I +K + K    + +  +L ++  +P +++ N         +I   L 
Sbjct: 117 DIPSYRRKPQDFITIKNQRKSETIISKNIELYQKSKIPNHLTYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|67035849|gb|AAY62851.1| small ribosomal protein subunit 4 [Sematophyllum demissum]
          Length = 191

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNFLEKKGLINQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|3098236|gb|AAC15566.1| small ribosomal protein 4 [Mniodendron camptotheca]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     ++   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTAQLKSNF---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ ++        +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQTIISKNLDFYQKYKIPNHLTYSYLEKKGFVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|67035875|gb|AAY62864.1| small ribosomal protein subunit 4 [Brotherella recurvans]
          Length = 192

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I  R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IICRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L    E RLD +++R     TI  ARQ VNHRH+LVN   V+I
Sbjct: 57  LNYVRIARKAKGSTGEVLSQLPEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCMVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I       
Sbjct: 117 PSYRCKPQDFITIKNQRKSETMISKNIEFYQKYKIPNHLTYNSLENKGLVNQIVDR---E 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 LIGLKINELLVVEYYSR 190


>gi|12330500|gb|AAG52787.1| ribosomal protein 4 [Zygodon viridissimus]
 gi|58293885|gb|AAW69889.1| small ribosomal protein 4 [Zygodon inermis]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R+V+I  Y
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRTVDIPGY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  +++ +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIEFYQKNKIPNHLTYNSLEKKGFINQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|86438894|emb|CAJ55423.1| small ribosomal protein 4 [Plagiochila fusca]
          Length = 183

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 5/187 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRSARRAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +K K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIIAIKNKEKSRSIVTKNINSFQKFKIPSHLTFDSTELRGSV 176

Query: 180 VRIPSSL 186
            ++ +  
Sbjct: 177 NQMINRE 183


>gi|118577601|gb|ABL07166.1| small ribosomal protein 4 [Piper methysticum]
          Length = 182

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D
Sbjct: 56  AKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I  + + +    V  +   A R ++P++++++         +I  S       + +   
Sbjct: 116 IITTRNEQRSKVLVQNSMDFASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|20531075|gb|AAM27359.1| ribosomal protein 4 [Diphyscium perminutum]
          Length = 185

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 10/192 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S            K S + ++L  KQK++ +YG I+E++     +
Sbjct: 1   GALPGLTNKTPQLKSSSI-----NASNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVR 54

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 55  IARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHILVNERIVNIPSYRC 114

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    +++    +++  +P +++ +         +I   L      + 
Sbjct: 115 KPQDFITIKDRQKSQNIIVKNMDFSQKYKIPNHLTFDSLEKKGLVNQI---LDRESIGLK 171

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 172 INELLVVEYYSR 183


>gi|307828375|gb|ADN94986.1| small ribosomal protein 4 [Fossombronia altilamellosa]
          Length = 187

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLTDRTIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRIAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 60  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + ++  L ++   P +++++   +  +  +           + +  
Sbjct: 120 DVITVRNRHKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|184127955|gb|ACC67877.1| ribosomal protein small subunit 4 [Marattia salicina]
 gi|184127961|gb|ACC67880.1| ribosomal protein small subunit 4 [Marattia sambucina]
 gi|184127969|gb|ACC67884.1| ribosomal protein small subunit 4 [Marattia mertensiana]
 gi|184127971|gb|ACC67885.1| ribosomal protein small subunit 4 [Marattia pellucida]
 gi|184127975|gb|ACC67887.1| ribosomal protein small subunit 4 [Marattia smithii]
 gi|184127991|gb|ACC67895.1| ribosomal protein small subunit 4 [Marattia fraxinea]
 gi|184127997|gb|ACC67898.1| ribosomal protein small subunit 4 [Marattia melanesica]
 gi|184127999|gb|ACC67899.1| ribosomal protein small subunit 4 [Marattia melanesica]
          Length = 199

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+ +      K+  + ++       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQPASKKISQYCIRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKHVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183
           V+I SYRCK  D+I V+ ++     V +  +   +D +PE+++++    +       RI 
Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197


>gi|42556486|gb|AAS19838.1| small ribosomal protein 4 [Pleurozia gigantea]
          Length = 191

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     SY   L       K S + ++L  KQK++ +YG ++E++   
Sbjct: 2   RRLGALPGLTNKTLKLKSSY---LDRSMSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A + +G T   L+  LE RLD  ++R   V TI  ARQ VNHRH+L+N   V+I S
Sbjct: 58  YVRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVSTIPGARQLVNHRHILINDNIVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C+ GDVI +K   K  + + +     +R  +P ++ ++         +          
Sbjct: 118 YNCEPGDVIAIKNPEKNQSIITKNMNSFQRPKIPNHLVLDSTQFRGLVNKTIDR---EWV 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVEFYSR
Sbjct: 175 DLKINELLVVEFYSR 189


>gi|12330496|gb|AAG52785.1| ribosomal protein 4 [Ulota crispa]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH++VN R V+I  Y
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHIIVNHRIVDIPXY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|63191749|gb|AAY34834.1| small ribosomal protein subunit 4 [Groutiella tomentosa]
          Length = 191

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P   R     ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGALPGLTNKTP---RLKSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +     ++  +P ++  N         +I   L    
Sbjct: 117 SYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDREL 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|48527397|gb|AAT45831.1| small ribosomal protein 4 [Plagiochila patriciae]
          Length = 178

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 5/182 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLKSKSNY---IDRSSLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQALLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K    + +     +R  +P ++  +   +  + 
Sbjct: 117 ISINNDVVDIPSYNCEPGDIITIGNKQKSRFIITKNINSFQRLKIPSHLIFDSTQLRGSV 176

Query: 180 VR 181
            +
Sbjct: 177 NQ 178


>gi|63191751|gb|AAY34835.1| small ribosomal protein subunit 4 [Macromitrium levatum]
          Length = 194

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGSTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNYRMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P ++  N         +I   L 
Sbjct: 117 DIPSYRCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RELIGLKINELLVVEYYSR 192


>gi|37992459|gb|AAR06408.1| small ribosomal protein 4 [Chaetomitrium dusenii]
          Length = 194

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 3   LIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 58

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I
Sbjct: 59  LNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDI 118

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +  +  ++  +P +++ +          I   L   
Sbjct: 119 PSYRCKPQDFITIKNRQKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNEI---LDRE 175

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 176 SIGLKINELLVVEYYSR 192


>gi|118577639|gb|ABL07185.1| small ribosomal protein 4 [Macropiper latifolium]
          Length = 182

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D
Sbjct: 56  AKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I  + + +    V  +   A R ++P++++++         +I  S       + +   
Sbjct: 116 IITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|145848881|emb|CAJ91117.1| ribosomal protein S4 [Acrocladium auriculatum]
          Length = 188

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K K K  A + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|29027242|gb|AAN47183.1| small ribosomal protein 4 [Hymenodontopsis stresemannii]
          Length = 199

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 13/204 (6%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGALPGSTNKTPQLK---YNSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHKHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVRI 182
           +I SYRCK  D I +K + K  A + +       D      +P +++ +         +I
Sbjct: 117 DIPSYRCKPQDFITIKNRQKYQAIINKNIDSKNIDFSQKYKIPNHLTYSFLEKKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
              L      + +   L+VE+YSR
Sbjct: 177 ---LDRESIDLKINELLIVEYYSR 197


>gi|74273107|gb|ABA01253.1| ribosomal protein S4 [Passiflora lindeniana]
          Length = 183

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQFVNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQFVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++ +          I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEQLPKHLTFHRFQYKGLVNEIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|37992523|gb|AAR06440.1| small ribosomal protein 4 [Garovaglia binsteadii var. mirabilis]
          Length = 194

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLPGLTNKVPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T    +   E R D I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLPNYVRIARKTKGSTGEVSLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK +      + +     ++  +P +++           +I   L 
Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|290487080|gb|ADD29924.1| ribosomal protein S4 [Rhododendron simsii]
          Length = 208

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 12/212 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+        K P    +        +RK   S + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLRALPGLTNKRPKPRNARRTQSRFVKRK--KSKYCIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGPTGQVLLQLLEMRLDNTLFRLGMALTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------DVPEYISVNHDN 174
           VLVNGR ++I SYRCK  D+I  + + K  A +  +     R       +P ++++    
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITARDERKSRALIQNSFDSLRRRKKFKFKLPNHLTLYRIQ 177

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 +I  S       + +    VVE+YSR
Sbjct: 178 YKGLVNQIIDSK---WVGLKINQMRVVEYYSR 206


>gi|184127967|gb|ACC67883.1| ribosomal protein small subunit 4 [Marattia squamosa]
          Length = 199

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 10/203 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+ +      K+  + ++       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLRIIRRLKDLPGLTNKTLKSKKAQI--AIDQPASKKISQYCIRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLKHVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRL 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIP 183
           V+I SYRCK  D+I V+ ++     V +  +   +D +PE+++++    +       RI 
Sbjct: 118 VDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKTQGFVNRIV 177

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +        + +   LVVE+YSR
Sbjct: 178 TRD---SIGLNINELLVVEYYSR 197


>gi|146261559|gb|ABQ15089.1| ribosomal protein S4 [Daphniphyllum sp. 205-82]
          Length = 184

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P         L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RAISDLRKQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNTLFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + K  A +      +   ++P++++++         +I  S       + + 
Sbjct: 116 RDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|7576553|gb|AAF63889.1| ribosomal protein system 4 [Brachythecium austroglareosum]
 gi|7576555|gb|AAF63890.1| ribosomal protein system 4 [Brachythecium salebrosum]
          Length = 188

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETVINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576639|gb|AAF63932.1| ribosomal protein system 4 [Pilotrichum fendleri]
          Length = 190

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P         +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGVLPGLTNKIPQLK---ASSITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTILGARQLVNHRHIVVNDYIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +L ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSEAIISKNIELYQKFKIPNHLTYSSLEKKGLINQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|78102677|gb|ABB21552.1| small ribosomal protein 4 [Plagiochila junghuniana]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQVLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I +  K K  A V +     ++  +P +++ +   +  +  ++    
Sbjct: 117 VDIPSYNCKPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMIXR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINEVLVVE 189


>gi|140083435|gb|ABO84829.1| ribosomal protein S4 [Pulchrinodus inflatus]
          Length = 187

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A + +     ++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQKSQAIITKNIDFYQKYKIPNHLTYNSLKKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|20531071|gb|AAM27357.1| ribosomal protein 4 [Theriotia kashmirensis]
          Length = 189

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       ++P    S            K S   ++L  KQK++ +YG I+E++  
Sbjct: 1   MRRLGALPGLTSQTPQLKSSSI-----NASXKKISQDRIRLEEKQKLRFHYG-ITERQLL 54

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 55  KYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNERIVNIP 114

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK  D I +K + K  + +++    +++   P +++ +         ++   L    
Sbjct: 115 SYHCKPQDFITIKDRQKSQSIIVKNMDFSQKYKTPNHLTFDSLEKKGLVNQV---LDRES 171

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 172 IGLKINXLLVVEYYSR 187


>gi|118577569|gb|ABL07150.1| small ribosomal protein 4 [Piper dilatatum]
          Length = 185

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRPRSESS----LRSQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK
Sbjct: 56  AGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  + + +    V  +   A R ++P++++++         +I  +       + +
Sbjct: 116 PRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDNK---GVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|212697279|ref|ZP_03305407.1| hypothetical protein ANHYDRO_01847 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848945|ref|ZP_08170455.1| ribosomal protein S4 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212675728|gb|EEB35335.1| hypothetical protein ANHYDRO_01847 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480589|gb|EGC83651.1| ribosomal protein S4 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 197

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+       K  R +G +      S  + RS         ++ K S +G+Q R KQK K 
Sbjct: 1   MAVSRDPIFKRCRSLGISPAYLGYSGESKRSN------SNQRRKLSEYGMQQREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FRS +++A +  G T  NLI   E RLD I +R+    T   ARQ V H H
Sbjct: 55  IYG-VSEKQFRSYYEKASKMHGQTGENLIILCERRLDNIAFRSGLARTRREARQVVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +L+NG+SV+I S   KEGDVIEV++KS+         +  +   +  ++  + +N+    
Sbjct: 114 LLLNGKSVDIPSILVKEGDVIEVREKSRSSQLFKAIKETNQSFGIVSWLDSDLENLKVKV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              P+  +D+  PV  +  ++VEFYS+
Sbjct: 174 TNFPTR-EDIDIPV--EERMIVEFYSK 197


>gi|37992435|gb|AAR06396.1| small ribosomal protein 4 [Bryobrothera crenulata]
          Length = 190

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQKKSEVIINKNMEFYQKSKIPNHLTYSSLEKKGLVXQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|3098144|gb|AAC15520.1| small ribosomal protein 4 [Timmia sibirica]
          Length = 184

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 8/191 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A +++    +++  VP +++ N         +I   L      
Sbjct: 117 RCKPQDFIXIKNRQKSQAIIMKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEF 203
           + +   LVVE+
Sbjct: 174 LKINELLVVEY 184


>gi|157689506|gb|ABV65309.1| ribosomal protein S4 [Juglans nigra]
          Length = 180

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  +  Q R SK S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 3   KRPKAGSDVRNQSRSSKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 61

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 62  LLQLLEMRLDNILFRLGMTSTIPQARQLVNHRHILVNGRIVDIPSYRCKPQDIITARDEQ 121

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           K  A +      + R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 122 KSRALIQNYLDSSPREELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 178


>gi|32401787|gb|AAP80882.1| small ribosomal protein 4 [Abies homolepis]
          Length = 191

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K P     Y      +    K S + ++L  KQK++ +YG ++E++   
Sbjct: 3   RRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I S
Sbjct: 58  YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  D+I ++ + +  A + +   L +RD+ P +++ N         +I  S      
Sbjct: 118 YPCKPQDIITIRDQQRLRAIIRKNIDLFQRDILPNHLTFNSLQYKGFINQIIDSK---WI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 SLKINELLVVEYYSR 189


>gi|12330462|gb|AAG52768.1| ribosomal protein 4 [Tetraphis geniculata]
          Length = 189

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++     
Sbjct: 2   LGVLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 58  RIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +    +++  +P ++++N         ++   L      +
Sbjct: 118 CKPQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LDREFIDL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|313112851|ref|ZP_07798497.1| ribosomal protein S4 [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624756|gb|EFQ08065.1| ribosomal protein S4 [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 200

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 1   MSKRESSKHKIDRRIGENL--WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M+K      K  + +G +    G  K      S G        + K S +  QL+ KQK+
Sbjct: 1   MAKNTQPIAKRCKALGISPAVMGYAKKNTTRNSNG------NMRKKQSEYASQLKEKQKV 54

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K  YG + EK+F + +  A+   G T  NL+  +E RLD +V+R  F  T   ARQ V+H
Sbjct: 55  KFIYGVL-EKQFHNAYLRAEARPGKTGENLLQIMECRLDNVVFRLGFAQTRRDARQLVSH 113

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMV 176
            H  VNG+ VNI SY+ K GDVIEV++ S+  A   +    +     +P +++    ++ 
Sbjct: 114 AHFTVNGKKVNIPSYQVKAGDVIEVRESSRSSAKFAKLTGPEAPVVALPAWLNRETGSLK 173

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++P    D+ Y V    +L+VE YS+
Sbjct: 174 GVVAKLPER-SDIDYEVA--EHLIVELYSK 200


>gi|160415806|gb|ABX39210.1| small ribosomal protein 4 [Bucklandiella didyma]
          Length = 188

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSNA---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A +++    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 KINKLLIVEYYSR 186


>gi|86438892|emb|CAJ55422.1| small ribosomal protein 4 [Plagiochila fasciculata]
          Length = 179

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 5/183 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  + 
Sbjct: 117 ISINNDMVDIPSYNCEPGDIIAIRNKEKSQSIVTKNMNSFQKLKIPSHLTFDSTQLQGSV 176

Query: 180 VRI 182
            ++
Sbjct: 177 NQM 179


>gi|67035877|gb|AAY62865.1| small ribosomal protein subunit 4 [Aptychella proligera]
          Length = 191

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 3   RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD +++R    PTI  ARQ VNH+H+LVN   VNI SY
Sbjct: 59  VRIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P Y++ +         +I          
Sbjct: 119 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNYLTYSSLEKKGFVNQIVDR---ELIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|67035714|gb|AAY62788.1| small ribosomal protein subunit 4 [Leucophanes mayottense]
          Length = 197

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 6/200 (3%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G  L G        ++    ++      K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKILRRLGT-LSGLSNKTPQLKASSISINQSISNKKISQYRIRLEEKQKLRFHYG-LTE 58

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 59  RQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNRI 118

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           VNI SY CK  D I +K + K    +++ +    +   P ++  N         +I   L
Sbjct: 119 VNIPSYHCKPQDFITIKDQQKYQTMIVKNTNFFPKYKTPNHLIFNSVEKKGLVNQI---L 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 DQESIGLKINELLVVEYYSR 195


>gi|293633997|gb|ADE60378.1| ribosomal protein subunit 4 [Notoligotrichum australe]
          Length = 187

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|12642262|gb|AAK00213.1| rps4 [Zygodon intermedius]
          Length = 190

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+   +
Sbjct: 1   RRLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERPLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R+V+I  
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRTVDIPG 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPHDFITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LDRELI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|313199636|ref|YP_004021252.1| ribosomal protein S4 [Isoetes flaccida]
 gi|291575365|gb|ADE18078.1| ribosomal protein S4 [Isoetes flaccida]
          Length = 202

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+    +     ++      K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIIRRLGRLPGPTQKTH---KKKPDFINRSTSSKKASKYRVRLEEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A  ++G T    +  LE R D I+      PTI  ARQ VNH+H
Sbjct: 58  HYG-LTERQLLEYVRIARGAKGSTGQVSLQSLEMRSDNIILGLGMAPTIPGARQMVNHKH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN  ++NI SYRCK  D+I ++ + K  A +      + +   P + + +    +   
Sbjct: 117 ILVNSCTINIPSYRCKPKDIITMRNRPKSQAMITRNRDSSRKYKKPNHSTFHSSQNIGLV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I            ++  LVVE++SR
Sbjct: 177 NQIIDR---EWIDSKIKELLVVEYHSR 200


>gi|7576663|gb|AAF63944.1| ribosomal protein system 4 [Bescherellia cryphaeoides]
          Length = 188

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIASY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +     ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|118577563|gb|ABL07147.1| small ribosomal protein 4 [Piper retrofractum]
          Length = 181

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+
Sbjct: 56  KGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDI 115

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I  + + +    V  +   A R ++P++++++         +I  S       + +   L
Sbjct: 116 ITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELL 172

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 173 VVEYYSR 179


>gi|12642242|gb|AAK00203.1| rps4 [Chamaebryum pottioides]
          Length = 193

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     S    ++     +K S + ++L  KQK++ +YG I+E++  +
Sbjct: 4   RRVGALPGLTNKTSQLKSST---INQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLN 59

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE R D +++R     TI  ARQ VNHRH+LVN   V+I S
Sbjct: 60  YVRIARKAKGSTGQVLLQILEMRSDNVIFRLGMALTIPEARQLVNHRHILVNDCIVDIPS 119

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +    +++  VP +++ N         +I   L     
Sbjct: 120 YRCKPQDFITIKDRQKSQAMITKNIDFSQKSKVPNHLTFNSLQKKGLVNQI---LDRESI 176

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVV +YSR
Sbjct: 177 GLKINELLVVXYYSR 191


>gi|74273151|gb|ABA01275.1| ribosomal protein S4 [Passiflora microstipula]
          Length = 183

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P+   ++        R  K S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKRPIVGSAF-------SRSGKKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEA-SQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K + K    +  +     E+ +P++++++         +I  S       + 
Sbjct: 113 KPRDLITAKDEEKLKDVIQHSFLSFPEKKLPKHLTLHLLQYKGLVNQIIDSK---WVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|293634005|gb|ADE60382.1| ribosomal protein subunit 4 [Notoligotrichum tapes]
          Length = 187

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNFLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|37992635|gb|AAR06496.1| small ribosomal protein 4 [Papillaria penicillata]
 gi|37992637|gb|AAR06497.1| small ribosomal protein 4 [Papillaria penicillata]
          Length = 188

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|15145866|gb|AAK83551.1| rps4 [Tayloria tasmanica]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNRKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKTKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P ++  N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQAIINKNIEFHQKYKIPNHLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576611|gb|AAF63918.1| ribosomal protein system 4 [Sematophyllum demissum]
          Length = 190

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNFLEKKGLINQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|77862547|gb|ABB04546.1| small ribosomal protein 4 [Peltolepis quadrata]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +    + KI RR+G+      K+  +   Y   ++      K S + ++L  KQK++ +Y
Sbjct: 1   RYRGPRVKIIRRLGDLPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHY 57

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L
Sbjct: 58  G-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIL 116

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVR 181
           +N   V+I SY CK  DVI +K + K  + + +      ++  P +++ +   +     +
Sbjct: 117 INNNMVDIPSYNCKPKDVITIKDRQKSQSIITKNLTSFQKQKTPNHLTFDLLQVKGLVNQ 176

Query: 182 IPSSLKDVPYPVIMQ 196
           I          + + 
Sbjct: 177 IIDR---EWIYLKIN 188


>gi|307828377|gb|ADN94987.1| small ribosomal protein 4 [Fossombronia pusilla]
 gi|307828383|gb|ADN94990.1| small ribosomal protein 4 [Fossombronia pusilla]
 gi|307828385|gb|ADN94991.1| small ribosomal protein 4 [Fossombronia wattsii]
 gi|307828436|gb|ADN95015.1| small ribosomal protein 4 [Fossombronia sp. VF-2010]
          Length = 188

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY 
Sbjct: 57  RVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  +           +
Sbjct: 117 CKPGDVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|42556462|gb|AAS19826.1| small ribosomal protein 4 [Nardia assamica]
          Length = 191

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  V+R    PTI  ARQ VNHRH+ +N   ++I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQLLEMRLDNTVFRLGMAPTIPGARQLVNHRHISINNDIIDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD I +K K K  + + +   L ++  +P +++ +   +  +  ++ +      
Sbjct: 117 SYNCEPGDKITIKNKQKSQSIITKNISLFQKLKIPSHLTFDLTQLQGSVNQMVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|7576527|gb|AAF63876.1| ribosomal protein system 4 [Pterobryon densum]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKILQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D + +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFVTIKNQQKSETIINKNIKFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|146261567|gb|ABQ15093.1| ribosomal protein S4 [Heuchera micrantha]
          Length = 184

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  K + K    +      +   ++P+Y++++         +I  +       + + 
Sbjct: 116 RDIITAKDEQKSRTLIQNYLDSSPHEELPKYLTLHPLQYKGLVNQIIDNK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|42556492|gb|AAS19841.1| small ribosomal protein 4 [Ptychanthus striatus]
          Length = 188

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K           +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGSLPGLTSKISKTK------IDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQLL 53

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++      TI +ARQ VNHRH+ +N   VNI 
Sbjct: 54  KYVRIARKTKGSTGQLLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNIP 113

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +K K K  + + +   L+++  +P +++ +   +     +         
Sbjct: 114 SYNCKPGDIITIKNKEKSQSIISKNINLSQKLQIPNHLTFDSTQLRGLVNQTIRR---EW 170

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 171 IDLKINELLVVEYYSR 186


>gi|7576587|gb|AAF63906.1| ribosomal protein system 4 [Helicodontium capillare]
          Length = 190

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D + +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFVTMKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|307828388|gb|ADN94992.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++     
Sbjct: 2   LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY 
Sbjct: 58  RVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK GDVI V+ + K  + + +   L ++   P +++++      +  +           +
Sbjct: 118 CKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WINL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|32401810|gb|AAP80893.1| small ribosomal protein 4 [Sassafras albidum]
          Length = 184

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RSGSDLRNQSRFGKRSQYRIRLEEKQKLRFHYG-LTERQLLXYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRVVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + +  A +      + R D+ ++++ +         +I          + + 
Sbjct: 116 RDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQYKGLVNQIIDIK---WIGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 EFLVVEYYSR 182


>gi|12330484|gb|AAG52779.1| ribosomal protein 4 [Tetraplodon lamii]
          Length = 188

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I  K + K  A + +     ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITTKDRQKSQAIISKNIXFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|58293897|gb|AAW69895.1| small ribosomal protein 4 [Schlotheimia torquata]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+          ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTSQLK---YNSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++D +P +++ N         +I   L+     
Sbjct: 117 RCKPQDSITIKDRRKSQDIINKNIDFYQKDKIPNHLTYNSLEKKGLVNQI---LERELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|218157225|gb|ACK58429.1| ribosomal protein subunit 4 [Polytrichadelphus peruvianus]
          Length = 186

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 7/190 (3%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+P     Y        +K   S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKTPQLKSGYINQQTLSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 57

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRCK 
Sbjct: 58  RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKP 117

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + +  A ++     +++  +P +++ N         +I   L      + + 
Sbjct: 118 QDFITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKIN 174

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 175 ELLVVEYYSR 184


>gi|32892124|gb|AAP89001.1| ribosomal protein S4 [Passiflora macrophylla]
          Length = 183

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     +  +P++++++          I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQEQLPKHLTLHRFQYKGLVNEIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|67035839|gb|AAY62846.1| small ribosomal protein subunit 4 [Schroeterella zygodonta]
          Length = 191

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|118577557|gb|ABL07144.1| small ribosomal protein 4 [Piper aequale]
          Length = 176

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 7   LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + +    V  
Sbjct: 66  LDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQN 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 126 SMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 174


>gi|22854695|gb|AAN09767.1| small ribosomal protein 4 [Dicranum majus]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P         +       K S + ++L   +K++ +YG I+E++  +  
Sbjct: 2   LGTLPGLTNKTPQLKSGS---IIQSTSNKKVSQYRIRLEENRKLRFHYG-ITERQLLNYI 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 58  RIARKAKGSTGQVLLQLLEMRLDNVILRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I ++ + K  A +++    +++  +P +++ +         +I   L      +
Sbjct: 118 CKPQDFITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|225552320|ref|ZP_03773260.1| ribosomal protein S4 [Borrelia sp. SV1]
 gi|225371318|gb|EEH00748.1| ribosomal protein S4 [Borrelia sp. SV1]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 6/184 (3%)

Query: 25  SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
             +  + + PG+HG+ RK+K + +G QL  KQK+K  YG +SE++  + FKEA +  G T
Sbjct: 8   KILKKKPHPPGMHGKARKAKITEYGKQLIEKQKIKFTYG-VSERQLTNTFKEAKKHHGVT 66

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
             NL+S LE R+D +VYRA F  +   ARQ V+H  +++NGR V I S   +  D I++K
Sbjct: 67  GDNLLSILERRIDNVVYRAGFAISRAHARQIVSHGIIILNGRRVTIPSIVLRTNDQIQIK 126

Query: 145 QKSKQLASVLEASQ--LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
           +K      +    +   + R++P +I VN D++       PS  +    P +    +VVE
Sbjct: 127 EKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLNIKVKHAPSRDE---IPTLANEQMVVE 183

Query: 203 FYSR 206
           +YS+
Sbjct: 184 YYSK 187


>gi|32401818|gb|AAP80897.1| small ribosomal protein 4 [Pterocarya stenoptera]
          Length = 174

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 5/175 (2%)

Query: 33  GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92
           G  L  Q R SK S + ++L  KQK++ +YG ++E++     + A +++G T   L+  L
Sbjct: 2   GSDLRNQSRFSKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLL 60

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + K  A 
Sbjct: 61  EMRLDNILFRLGMTSTIPQARQLVNHRHILVNGRIVDIPSYRCKPQDIITARDEQKSRAL 120

Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      + R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 IQNYLDSSPREELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 172


>gi|42718066|gb|AAS38455.1| rps4 [Brachymitrion jamesonii]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSXS---INQSTSNKKTSQYRIRLXEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRMARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLKNQGLINQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|46486572|gb|AAS98722.1| ribosomal protein subunit 4 [Cyrtopus setosus]
          Length = 199

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 12  LGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 67

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 68  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 127

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +     ++  +P +++ +         +I   L      +
Sbjct: 128 CKPQDFITIKDRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIGL 184

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 185 KINELLVVEYYSR 197


>gi|7576637|gb|AAF63931.1| ribosomal protein system 4 [Leucomium strumosum]
          Length = 190

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNFIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQRKSETIISKNIEFYQKLKIPNHLTYNFLEKKGLINQI---LHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|74272274|gb|AAT01827.2| small ribosomal protein 4 [Hymenophyton flabellatum]
          Length = 193

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           R +G  L G     +  +S         +K   S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RXLGT-LPGLSNKMLELKSGYTNQSTANKK--ISQYRIRLEEKQKLRFHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+ +N   V+I S
Sbjct: 57  YVRIARRAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPGARQLVNHRHIPINDDMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  DVI  + + K    +     L ++  +P +++ +      +  ++         
Sbjct: 117 YNCKPEDVITTRNRRKSQLIITRNINLFQKQKIPNHLTFDSTQFRGSVNQMIDR---ECI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 NLKINELLVVEYYSR 188


>gi|58293899|gb|AAW69896.1| small ribosomal protein 4 [Desmotheca apiculata]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K   K    + +     ++  +P ++  N         +I   L      
Sbjct: 117 RCKPLDFITIKDGRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|3098196|gb|AAC15546.1| small ribosomal protein 4 [Philonotis fontana]
 gi|29422373|gb|AAO84582.1| small ribosomal protein 4 [Philonotis fontana]
          Length = 187

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A + +     ++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|58293869|gb|AAW69882.1| small ribosomal protein 4 [Orthotrichum macrocephalum]
          Length = 189

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H++VN R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I          
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLENKGFVNQILDRK---LIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|12330456|gb|AAG52765.1| ribosomal protein 4 [Andreaea rothii]
 gi|20531051|gb|AAM27349.1| ribosomal protein 4 [Andreaea rothii]
          Length = 188

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y       ++ S+   + ++L  KQK++ +YG I+E++     
Sbjct: 1   LGALPGLTNKTPQLKSGYMDPFISNKKMSQ---YRIRLEEKQKLRFHYG-ITERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +    +++  +P ++  N         +I          +
Sbjct: 117 CKPQDFITIKDRQKSQAIITKNIDCSQKXKIPNHLIFNSLQKKGLINQIIDR---ESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|258611701|ref|ZP_05711611.1| ribosomal protein S4 [Listeria monocytogenes FSL R2-503]
 gi|258605525|gb|EEW18133.1| ribosomal protein S4 [Listeria monocytogenes FSL R2-503]
          Length = 170

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 5/168 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S +GLQ   KQK++  YG ++E++F++ F +A + +G    N +  LE RLD 
Sbjct: 8   QLNVKKYSEYGLQQAEKQKLRHMYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 66

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IVYR     T  AARQ VNH H+ V+G+ V+I SY+   G VI V++KS + +++ E+ +
Sbjct: 67  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLE 126

Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++   VPEY++ + + +  +  R+P   +       +    +VEFYSR
Sbjct: 127 VSSF-VPEYVTFDAEKLTGSLNRLPERSE---LAAEINEAFIVEFYSR 170


>gi|163804148|ref|ZP_02197919.1| 30S ribosomal protein S4 [Vibrio sp. AND4]
 gi|159172034|gb|EDP57005.1| 30S ribosomal protein S4 [Vibrio sp. AND4]
          Length = 143

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 5/147 (3%)

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR+ +K+A R +G+T  NL+  LE RLD +VYR  F  T   ARQ V+H+ 
Sbjct: 1   MYGVL-EKQFRNYYKDAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKA 59

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           +LVNG+ VN+ S++    DV+ +++K+KQ A +  A ++AE R+ P +I V+   M  TF
Sbjct: 60  ILVNGKVVNVPSFKVAANDVVSIREKAKQQARIKAALEVAEQREKPTWIEVDGGKMEGTF 119

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P           +   L+VE YS+
Sbjct: 120 KRMPERSD---LSADINEQLIVELYSK 143


>gi|48927217|emb|CAE47544.1| small ribosomal protein 4 [Equisetum telmateia subsp. braunii]
          Length = 207

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I  R   NL G     V ++        Q  + K S +G++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQTSGSDQSNQKKVSQYGIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V+I S+ CK  D+I +       + + +  +  A+  +P+++++         
Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GLVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|262192914|gb|ACY30474.1| small ribosomal subunit protein 4 [Bryum apiculatum]
          Length = 188

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ V+HRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +   L ++   P +++ N         +I   L      +
Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFFKKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|296120999|ref|YP_003628777.1| ribosomal protein S4 [Planctomyces limnophilus DSM 3776]
 gi|296013339|gb|ADG66578.1| ribosomal protein S4 [Planctomyces limnophilus DSM 3776]
          Length = 202

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M +    K +++RR+G  ++        +  R+  PG+  +RRK     +G     KQK+
Sbjct: 1   MGRYTGPKGRVNRRLGAIVFENAGAIRALERRNTPPGMAERRRKLSA--YGTAHFEKQKI 58

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K YYG + E + R  F+ A   +G+T   L+   E RLD IV RA F  +   ARQ + H
Sbjct: 59  KYYYG-LREAQLRKYFEMARAKKGNTGEFLLLTCERRLDNIVRRAGFTKSRLQARQGIVH 117

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
           RH  +NG +V+I S   K GDVI ++ +        +  + A     ++++V+       
Sbjct: 118 RHFQLNGHTVDIPSILVKPGDVITLRNRPNVKELYADLVESASLPSVDWLAVDRSGFEIR 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + +P++  D+  PV +   LVV   SR
Sbjct: 178 VMALPTAT-DISLPVEI--GLVVALMSR 202


>gi|37992631|gb|AAR06494.1| small ribosomal protein 4 [Papillaria nigrescens]
          Length = 188

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|7576589|gb|AAF63907.1| ribosomal protein system 4 [Echinodium umbrosum]
          Length = 186

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P  T S    ++     +K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLTSSS---INQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|262192918|gb|ACY30476.1| small ribosomal subunit protein 4 [Rosulabryum capillare]
          Length = 188

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +   L ++   P +++ N         +I   L      +
Sbjct: 117 CKPEDSITIKDRQKSQAIINKNLNLYQKYKTPNHLTYNFLKKKGLVTQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|166836614|gb|ABY90539.1| ribosomal protein small subunit 4 [Pilularia minuta]
          Length = 200

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K+    ++       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKIIRRLKSLPGLTGKASKQKKTRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD +V+     PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS--QLAERDVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +           ++P ++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSGSNEIPNHLSLSILEGNKPKGLVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198


>gi|12330470|gb|AAG52772.1| ribosomal protein 4 [Buxbaumia aphylla]
          Length = 189

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P     Y    +      K S + ++L  KQK++ +YG I+E++    
Sbjct: 1   RLGALPGLTNKIPXLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T    +   E RLD I++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARGAKGSTGQISLQSSEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNNIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K   K    +    +L+++  +P +++ N          I   L      
Sbjct: 117 RCKPQDFITIKNSQKSQTXITXNIELSQKYKIPNHLTFNSLEKKGLVNXI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576565|gb|AAF63895.1| ribosomal protein system 4 [Clasmatodon parvulus]
          Length = 190

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D + +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|146261563|gb|ABQ15091.1| ribosomal protein S4 [Haloragis aspera]
          Length = 182

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRP----RVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 56  AKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPQD 115

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I  K + K  A +     L+   ++P+++++          +I  +       + +   
Sbjct: 116 IITAKDEQKSRAMIQNYLDLSPHEELPKHLTLQPFQYKGLVNQIIDNK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|32401822|gb|AAP80899.1| small ribosomal protein 4 [Hedera helix]
          Length = 184

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK 
Sbjct: 56  GKVKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + +      +  +   +   ++P++++++         +I  S       + + 
Sbjct: 116 RDIITARDEENSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|307828405|gb|ADN95000.1| small ribosomal protein 4 [Fossombronia sp. VF-2010]
 gi|307828413|gb|ADN95004.1| small ribosomal protein 4 [Fossombronia cultriformis]
          Length = 187

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 60  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + +  +  L ++   P +++++   +  +  +           + +  
Sbjct: 120 DVITVRNRQKSQSIIARSMSLFQKAKTPNHLTLDSTQLRGSINQTIDRD---WINLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|12330534|gb|AAG52804.1| ribosomal protein 4 [Leptobryum stellatum]
 gi|42718114|gb|AAS38479.1| rps4 [Leptobryum stellatum]
          Length = 189

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRIHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I S 
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSD 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFIIIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|108796748|ref|YP_636511.1| ribosomal protein S4 [Zygnema circumcarinatum]
 gi|90101671|sp|Q32RL5|RR4_ZYGCR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|61393732|gb|AAX45874.1| ribosomal protein S4 [Zygnema circumcarinatum]
          Length = 199

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K     R        Q +K K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRVKIVRRLGPLPGLTTK----RRKLTEQNKLQDKKQKKSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD  ++R     TI AARQ VNH H
Sbjct: 57  HYG-LTERQLLRYIRIARKAKGSTGQTLLQLLEMRLDNTIFRLGMAATIRAARQLVNHGH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +++N R V+I SYRCK  D I ++ + +    + +      R  +P ++++      A  
Sbjct: 116 IVLNERVVDIPSYRCKPNDKITIRDRDRSRILIEKNRTARSRLRIPGHLAM--KQNTALI 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++          + +    +VE+YSR
Sbjct: 174 TQVVDPK---SIGLKVNELFIVEYYSR 197


>gi|307828417|gb|ADN95006.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 188

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY 
Sbjct: 57  RVARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK GDVI V+ + K  + + +   L ++   P +++++   +  +  +           +
Sbjct: 117 CKPGDVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|7576609|gb|AAF63917.1| ribosomal protein system 4 [Taxithelium planum]
          Length = 190

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 3   RLGTLPGLTNKTLQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V+I SY
Sbjct: 59  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAATIPEARQLVNHRHILVNDCIVDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K K K    + +  + +++  +P +++ N         +I          
Sbjct: 119 RCKPQDFITIKNKRKSETIINKNIEFSQKYKIPNHLTYNSLEKKGLINQIVDR---ELIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|15145864|gb|AAK83550.1| rps4 [Tayloria magellanica]
          Length = 189

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQTIINKNIEFYQKYKIPNHLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|67036036|gb|AAY62944.1| small ribosomal protein subunit 4 [Bryhnia novae-angliae]
          Length = 189

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|3098172|gb|AAC15534.1| small ribosomal protein 4 [Rhodobryum giganteum]
          Length = 189

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A + +   L ++   P +++ N         +I   L      
Sbjct: 117 RCKPEDSIIIKDRQESQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576563|gb|AAF63894.1| ribosomal protein system 4 [Anacamptodon splachnoides]
          Length = 188

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGPTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIINKNIEFYQKFKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|297179943|gb|ADI23951.1| small ribosomal protein 4 [Sphagnum palenae]
          Length = 186

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 7/190 (3%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G       ++S         +K   S + ++L  KQK++ +YG I+E++     + A
Sbjct: 1   SLPGLTNKTPQSKSGYINQSISNKK--VSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIA 57

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            R++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI SYRCK 
Sbjct: 58  RRAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCKP 117

Query: 138 GDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + K  A +  +   ++    P +++++         +I          + + 
Sbjct: 118 RDFITIKDRPKSQAIITRSMDYSQSHKTPNHLNLDSSQKKGLVNQIIDR---ESIGLKIN 174

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 175 ELLVVEYYSR 184


>gi|293633995|gb|ADE60377.1| ribosomal protein subunit 4 [Notoligotrichum australe]
          Length = 187

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|63191853|gb|AAY34886.1| small ribosomal protein subunit 4 [Molendoa sendtneriana]
          Length = 191

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPNLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R +  PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLRMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K    + +    ++   +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRQKSQIMITKNVDFSQNYKIPNHLTFNSLEKKGLVNQI---LNQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|18920785|gb|AAL82437.1| ribosomal protein system 4 [Pseudotaxiphyllum pohliicarpum]
          Length = 190

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 2   RLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 58  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L      
Sbjct: 118 RCKPKDFITIKNQRKSEAIISKNMEFYQKSKIPNHLTYSSLEKKGLVTQI---LDRESIG 174

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 175 LKINELLVVEYYSR 188


>gi|37992409|gb|AAR06383.1| small ribosomal protein 4 [Adelothecium bogotense]
          Length = 194

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI  R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIHRLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMATTIPGARQLVNHRHILVNNFIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNQRKSEVIINKNIEFYQKSKIPNHLTYSSLEKKGVVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 CKSIGLKINELLVVEYYSR 192


>gi|67035602|gb|AAY62732.1| small ribosomal protein subunit 4 [Aongstroemia jamaicensis]
          Length = 186

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 59  KTKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +    +++  VP +++ N         +I   L      + +  
Sbjct: 119 DFITIKNRQKSQAMITKNVDFSQKYKVPNHLTFNFLEKKGLVNQI---LDQESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|33411992|emb|CAD86726.1| ribosomal protein small subunit 4 [Brachydontium trichodes]
          Length = 185

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  VP ++++N         +I   L      + +  
Sbjct: 118 DFITIKDRQKSQAMIIKNIDFSQKYKVPNHLTLNSLEKKGLINQI---LNHESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|58293871|gb|AAW69883.1| small ribosomal protein 4 [Orthotrichum assimile]
 gi|116517476|gb|ABJ99092.1| ribosomal protein subunit 4 [Orthotrichum freyanum]
 gi|116517478|gb|ABJ99093.1| ribosomal protein subunit 4 [Orthotrichum freyanum]
          Length = 189

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P          +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSGSA---NQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H++VN R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I          
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|34763719|ref|ZP_00144640.1| SSU ribosomal protein S4P [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886498|gb|EAA23752.1| SSU ribosomal protein S4P [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 187

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 68/197 (34%), Positives = 100/197 (50%), Gaps = 11/197 (5%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  R +G +         + R   P         KP+ +  QLR KQK K  Y ++ EK+
Sbjct: 2   KKCRNLGIDPVILGVKKSSNRQIRP-----NANKKPTEYATQLREKQKAKFIY-NVMEKQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
           FR I++EA R  G T   LI +LE RL+ +VYR  F  T   ARQ V+H H+ VNGR VN
Sbjct: 56  FRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGHIAVNGRRVN 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189
           I S+R K GD++ V + SK +  +  A + A    P ++ ++        ++ P+     
Sbjct: 116 IASFRVKVGDIVSVIENSKNVELIKLAVEDA--TPPAWLELDRAAFSGKVLQNPTKDD-- 171

Query: 190 PYPVIMQPNLVVEFYSR 206
                +  +L+VEFYSR
Sbjct: 172 -LDFDLNESLIVEFYSR 187


>gi|262192904|gb|ACY30469.1| small ribosomal subunit protein 4 [Bryum recurvulum]
          Length = 188

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ V+HRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +   L ++   P +++ N         +I   L      +
Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|118577605|gb|ABL07168.1| small ribosomal protein 4 [Piper muricatum]
 gi|118577623|gb|ABL07177.1| small ribosomal protein 4 [Piper sylvaticum]
          Length = 180

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 3   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 61

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 62  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 121

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 122 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 178


>gi|7576645|gb|AAF63935.1| ribosomal protein system 4 [Leskeodon cubensis]
          Length = 189

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K      +    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGVLPGLTNKILQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNFTVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|63191763|gb|AAY34841.1| small ribosomal protein subunit 4 [Hypnodendron microstictum]
          Length = 191

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRXGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMALTIPGARQLVNHRHILVNDRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIKDRPKSQAIISKNIDFYQKYKIPNHLTYSSLEKKGFINQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|224533471|ref|ZP_03674062.1| ribosomal protein S4 [Borrelia burgdorferi CA-11.2a]
 gi|224513375|gb|EEF83735.1| ribosomal protein S4 [Borrelia burgdorferi CA-11.2a]
          Length = 178

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 6/180 (3%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88
            + + PG+HG+ RK+K + +G QL  KQK+K  YG +SE++  + FKEA +  G T  NL
Sbjct: 1   KKPHPPGMHGKARKAKITEYGKQLIEKQKIKFTYG-VSERQLTNTFKEAKKHHGVTGDNL 59

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           +S LE R+D +VYRA F  +   ARQ V+H  +++NGR V I S   +  D I++K+K  
Sbjct: 60  LSILERRIDNVVYRAGFAISRAHARQIVSHGIIILNGRRVTIPSIILRANDQIQIKEKDS 119

Query: 149 QLASVLEASQ--LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +    +   + R++P +I VN D++       PS  +    P +    +VVE+YS+
Sbjct: 120 LKKLIRSNIEKTSSLRNLPTWIEVNADDLNIKVKHAPSRDE---IPTLANEQMVVEYYSK 176


>gi|77019207|emb|CAH60211.1| chloroplast 30S ribosomal protein S4 [Dryptodon torquatus]
          Length = 187

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + L+L  KQK++ +YG I+E++  +  + A 
Sbjct: 4   PGLTNKTPQLKSSS---INQSTSNKKISQYRLRLEEKQKLRFHYG-ITERQLLNYVRIAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 60  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 119

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ N         +I   L      + +  
Sbjct: 120 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|262192910|gb|ACY30472.1| small ribosomal subunit protein 4 [Bryum yuennanense]
          Length = 188

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +     ++   P +++ N         +I   L      +
Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNFYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|74273225|gb|ABA01312.1| ribosomal protein S4 [Passiflora tryphostemmatoides]
          Length = 183

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAKSAF-------SRPRRKSQYCIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPTGPVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     ++ +P++++++          I          + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPQKKLPKHLTLHRFPYKGLVHEIID---CKWVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|74273245|gb|ABA01322.1| ribosomal protein S4 [Paropsia guineensis]
          Length = 178

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 1   KRPRAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRLAGKAKGSTGQV 59

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 60  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQ 119

Query: 148 KQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           K +  V  +   + + ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 KSIVLVQNSLDSSPQEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 176


>gi|58293887|gb|AAW69890.1| small ribosomal protein 4 [Pentastichella pentasticha]
 gi|58293891|gb|AAW69892.1| small ribosomal protein 4 [Pleurorthotrichum chilense]
          Length = 189

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYQKYKIPNHLTYNSLEKNGFVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|297571412|ref|YP_003697186.1| ribosomal protein S4 [Arcanobacterium haemolyticum DSM 20595]
 gi|296931759|gb|ADH92567.1| ribosomal protein S4 [Arcanobacterium haemolyticum DSM 20595]
          Length = 206

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 1   MSKRESSKH-KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M+   + K  +  R +G  L  + +  +  R Y PG HG+ R  K S + ++L+ KQ+++
Sbjct: 1   MATNRARKLVRQSRALGLALTPKAERYMQRRPYRPGEHGRGR-VKESDYSVRLKEKQRLR 59

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I E + R ++ EA R+ G +  NL+  LE RLD +V RA F  TI  ARQ V HR
Sbjct: 60  AQYG-IREAQLRKVWDEARRTEGMSGENLVELLEMRLDALVLRAGFARTIAQARQVVVHR 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVNHDNM 175
           H+LV+G+ V+  S+R K G V++VK +S+  A  L A+Q    DV    PEY+ V  + +
Sbjct: 119 HILVDGKLVDRPSFRVKPGQVVQVKPRSQASAQFLAAAQGQHADVLPAAPEYMKVELEKL 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               VR P   +    PV     +VVEFYSR
Sbjct: 179 RFELVRRPKRAE---VPVTCDVQMVVEFYSR 206


>gi|238058442|gb|ACR39372.1| small ribosomal protein 4 [Ptychostomum lonchocaulon]
 gi|262192912|gb|ACY30473.1| small ribosomal subunit protein 4 [Anomobryum auratum]
 gi|262192916|gb|ACY30475.1| small ribosomal subunit protein 4 [Bryum amblyodon]
          Length = 188

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +   L ++   P +++ N         +I   L      +
Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992625|gb|AAR06491.1| small ribosomal protein 4 [Papillaria imponderosa]
          Length = 188

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|21914154|gb|AAM81299.1| ribosomal protein subunit 4 [Plagiobryum archangelicum]
          Length = 197

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 10  LGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 65

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 66  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 125

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +   L ++   P +++ N         +I   L      +
Sbjct: 126 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 182

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 183 KINELLVVEYYSR 195


>gi|7576515|gb|AAF63870.1| ribosomal protein system 4 [Cryphaea glomerata]
          Length = 190

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I 
Sbjct: 57  NYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I ++ + K  A + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFITIQNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|118577625|gb|ABL07178.1| small ribosomal protein 4 [Piper thomsonii]
          Length = 184

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGRVLLQLLEMRLDNILFRLSMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + +    V  +   A R ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|194738528|gb|ACF93821.1| small ribosomal protein 4 [Leptoscyphus gibbosus]
 gi|194738558|gb|ACF93836.1| small ribosomal protein 4 [Leptoscyphus gibbosus]
          Length = 177

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++   K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNTQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  +I +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175


>gi|118577609|gb|ABL07170.1| small ribosomal protein 4 [Piper nigrum]
          Length = 176

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 7   LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + +    V  
Sbjct: 66  LDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQN 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   A   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 126 SMDSASHEELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 174


>gi|12642216|gb|AAK00190.1| rps4 [Drummondia obtusifolia]
          Length = 189

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLXALPGLTSKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQILLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +    +++  VP +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIDFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|63101033|gb|AAY33141.1| small ribosomal protein 4 [Scorpidium scorpioides]
          Length = 188

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|15145868|gb|AAK83552.1| rps4 [Tayloria lingulata]
          Length = 189

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P+++  N         +I   L      
Sbjct: 117 RCKPQDFITIKARQKSQVIINKNIEFHQKHKIPDHLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|12045167|ref|NP_072978.1| 30S ribosomal protein S4 [Mycoplasma genitalium G37]
 gi|255660353|ref|ZP_05405762.1| 30S ribosomal protein S4 [Mycoplasma genitalium G37]
 gi|1350998|sp|P47553|RS4_MYCGE RecName: Full=30S ribosomal protein S4
 gi|1046011|gb|AAC71533.1| ribosomal protein S4 [Mycoplasma genitalium G37]
 gi|166078669|gb|ABY79287.1| ribosomal protein S4 [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 205

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 3   KRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQR-RKSKPSYFGLQLRAKQKMK 59
           K   S  K  RR+G +L    K  S    R   PG HG R R S  S +  QL+ KQ+M+
Sbjct: 2   KYTGSIFKRSRRLGFSLLENNKEFSKGKKRKSIPGQHGNRFRSSTLSGYAQQLQEKQRMQ 61

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG I++K+FR +F+   + +G+ + NL   LESRLD IVYR  F PT  +ARQ VNH 
Sbjct: 62  YMYG-ITDKQFRRLFRFVLKQKGNLTVNLFRVLESRLDNIVYRMGFAPTRKSARQMVNHG 120

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           HV++N ++V+  S     GD + +K +  +   V    +     +  ++  N      T+
Sbjct: 121 HVILNDQTVDTPSIIINPGDKVRLKARITKSPLVKNFIE--NSVISSFVETNKKAFEGTY 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +R P   +    P  +  + VVE+Y R
Sbjct: 179 IRFPERSE---LPAGINESYVVEWYKR 202


>gi|223587846|emb|CAQ03833.1| ribosmal protein S4 [Syringodea unifolia]
          Length = 186

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 10/194 (5%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 56  LTERQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRI 182
           GR V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I
Sbjct: 116 GRIVDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQI 175

Query: 183 PSSLKDVPYPVIMQ 196
             S       + + 
Sbjct: 176 IDSK---WIGLKIN 186


>gi|218157211|gb|ACK58422.1| ribosomal protein subunit 4 [Atrichopsis compressa]
 gi|218157219|gb|ACK58426.1| ribosomal protein subunit 4 [Notoligotrichum minimum]
 gi|293634001|gb|ADE60380.1| ribosomal protein subunit 4 [Notoligotrichum crispulum]
          Length = 187

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+      Y   ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTNKTLQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A + +    +++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|7576559|gb|AAF63892.1| ribosomal protein system 4 [Bryhnia novae-angliae]
          Length = 188

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETVIDKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|63191681|gb|AAY34802.1| small ribosomal protein subunit 4 [Lepyrodontopsis trichophylla]
          Length = 198

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRIRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I 
Sbjct: 117 DYIVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 176 --LNRESIGLKINELLVVEYYSR 196


>gi|227501160|ref|ZP_03931209.1| ribosomal protein S4 [Anaerococcus tetradius ATCC 35098]
 gi|227216745|gb|EEI82146.1| ribosomal protein S4 [Anaerococcus tetradius ATCC 35098]
          Length = 197

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +   +K  R +G +      +  + R+         R+SK S +G+Q R KQK K 
Sbjct: 1   MAVSKDPVYKRARALGISPAYLGYTGESKRALP------NRRSKLSEYGMQQREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FR  ++ A + +G T   LI   E RLD + +R+    T   ARQ V H H
Sbjct: 55  IYG-VSEKQFRGYYEAASKMKGQTGEELIILCERRLDNVAFRSGLARTRREARQIVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           + VNG  V+I SY+  EGDVIEV++KS+  +      +  A   V E+++ + +N+    
Sbjct: 114 LTVNGVQVDIPSYKVSEGDVIEVREKSRSNSLFKAIKETNATFGVVEWLNSDIENLKVIV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P+  +D+  PV  +  ++VEFYS+
Sbjct: 174 DRFPTR-EDIDIPV--EERMIVEFYSK 197


>gi|146261551|gb|ABQ15085.1| ribosomal protein S4 [Cercidiphyllum japonicum]
          Length = 174

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 5/175 (2%)

Query: 33  GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92
           G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  L
Sbjct: 2   GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLL 60

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD I++R     TI  ARQ VNH+H+LVNG  VNI SYRCK  D+I  + + K  A 
Sbjct: 61  EMRLDNILFRLGMASTIPGARQLVNHKHILVNGGIVNIPSYRCKPRDIITARDEQKSRAL 120

Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +      +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 IQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 172


>gi|37992571|gb|AAR06464.1| small ribosomal protein 4 [Lepidopilidium laevisetum]
          Length = 191

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G  L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGV-LPGLSNKILELKSNSITQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI AARQ VNHRH++VN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTISAARQLVNHRHIVVNNYIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITIKNQPKSEAMISKNIEFYKKIKIPNHLTSNFLEKKGLINQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|75858224|gb|ABA28686.1| small ribosomal protein 4 [Allisonia cockaynii]
          Length = 191

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G  L G     + ++S         +K   S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGA-LPGLTNKILKSKSGYTNQSVSNKK--ISQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L++  +V+I 
Sbjct: 57  KYVRIARKAKGSTGRVLLQSLEMRLDNIIFRFGMAPTIPGARQLVNHRHILIDDATVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK  DVI +K + K  + +      +++  +P +++ +      +  ++        
Sbjct: 117 SYGCKPRDVITIKNQRKPQSIITRDINSSQKPRIPNHLTFDSTQXRGSVNQMIDRD---W 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|7109195|gb|AAF36673.1| ribosomal protein 4 [Aulacopilum hodgkinsoniae]
          Length = 190

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKIPQLKSSS---INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R     TI  ARQ VNH+H+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMALTIPGARQLVNHKHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I +K + K    +L+    +    VP +++ N         +I   L     
Sbjct: 117 YRCKPQDLITIKNRQKSQGIILKNVDFSXXFKVPIHLTFNSLEKKGIVNQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|58293861|gb|AAW69878.1| small ribosomal protein 4 [Leiomitrium plicatum]
          Length = 189

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P ++  N         +I   L      
Sbjct: 117 RCKPLDFITIKDRQKSQNIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|67035959|gb|AAY62906.1| small ribosomal protein subunit 4 [Echinodium umbrosum]
          Length = 187

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLXSSS---INQSTSNXKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|328488194|gb|AEB19910.1| small ribosomal protein 4 [Schistochila tasmanica]
          Length = 191

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRSGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMTTTIPGARQLVNHRHILINNYIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K   K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNNKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|118577561|gb|ABL07146.1| small ribosomal protein 4 [Piper argyrophyllum]
 gi|118577581|gb|ABL07156.1| small ribosomal protein 4 [Piper graeffei]
          Length = 179

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 2   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 60

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 61  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 177


>gi|77019175|emb|CAH60193.1| chloroplast 30S ribosomal protein S4 [Grimmia incurva]
          Length = 195

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 12  PGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 67

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 68  KAKGSTGQVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 127

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ N         +I   L      + +  
Sbjct: 128 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 184

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 185 LLVVEYYSR 193


>gi|67035887|gb|AAY62870.1| small ribosomal protein subunit 4 [Fauriella tenuis]
          Length = 188

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSNS---INESTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+   E RLD +++R     T+  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMASTVPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I          +
Sbjct: 117 CKPQDFISIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQIVDR---ESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992515|gb|AAR06436.1| small ribosomal protein 4 [Euptychium vitiense]
          Length = 194

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGTLQGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITEQ 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLPEMRSDNIIFRLGMAPTISGARQLVNHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK +      + +     ++  +P +++           +I   L 
Sbjct: 117 NIPSYRCKPQDFIIVKNEKNSEGVINKDGDFHQKSKIPNHLTYIFLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|307828444|gb|ADN95018.1| small ribosomal protein 4 [Fossombronia altilamellosa]
          Length = 185

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 58  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + ++  L ++   P +++++   +  +  +           + +  
Sbjct: 118 DVITVRNRHKSQSIIAKSMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|157689438|gb|ABV65275.1| ribosomal protein S4 [Carica papaya]
          Length = 177

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 5/179 (2%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88
               G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L
Sbjct: 1   RPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVL 59

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           +  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D I VK + K
Sbjct: 60  LQLLEMRLDNILFRMGMALTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDTITVKDEQK 119

Query: 149 QLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A +      +   ++P +++++         +I          + +   LVVE+YSR
Sbjct: 120 SRALIQSFLDSSTHEELPNHLTLHTFQYEGLVNQIIDRK---WVGLKINELLVVEYYSR 175


>gi|42718100|gb|AAS38472.1| rps4 [Tetraplodon mnioides]
          Length = 189

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIIKKNIEFYQKYKIPNHLTYNSLQKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFY 204
           + +   LVVE+Y
Sbjct: 174 LKINELLVVEYY 185


>gi|307828415|gb|ADN95005.1| small ribosomal protein 4 [Fossombronia cultriformis]
          Length = 188

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       +       Y   L   ++ S+   + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRFHYG-LTERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY 
Sbjct: 57  RVARKAKGSTGQTLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYS 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK GDVI V+ + +  + + +   L ++   P +++++   +  +  +           +
Sbjct: 117 CKPGDVITVRNRQESQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|218157221|gb|ACK58427.1| ribosomal protein subunit 4 [Notoligotrichum tapes]
          Length = 186

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTLQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  
Sbjct: 59  RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +  A + +    +++  +P +++ N         +I   L      + +  
Sbjct: 119 DFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNFLEKKGLVNQI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|15145860|gb|AAK83548.1| rps4 [Tayloria octoblepharum]
          Length = 189

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLNSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRVARKAKGSTGEILLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K +    A + +  +  ++  +P ++  N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQTSQAIINKNIEFHQKHKIPTHLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|15145828|gb|AAK83532.1| rps4 [Aplodon wormskioldii]
          Length = 189

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEXKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R V+I SY
Sbjct: 57  VRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQTIISKNIEFYQKYKIPNHLTFNFLQKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFY 204
           + +   LVVE+Y
Sbjct: 174 LKINELLVVEYY 185


>gi|293633985|gb|ADE60372.1| ribosomal protein subunit 4 [Itatiella ulei]
 gi|293633987|gb|ADE60373.1| ribosomal protein subunit 4 [Itatiella ulei]
 gi|293634019|gb|ADE60389.1| ribosomal protein subunit 4 [Oligotrichum riedelianum]
          Length = 186

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTLQLKSGYINQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  
Sbjct: 59  RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +  A +      +++  +P +++ N         +I   L      + +  
Sbjct: 119 DFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|66352020|gb|AAY44743.1| ribosomal protein system 4 [Splachnum pensylvanicum]
          Length = 190

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G  L G     +  +S            K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGA-LPGLTNKTLQLKSSPINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I S
Sbjct: 57  YVRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +     ++  +P ++  N         +I         
Sbjct: 117 YRCKPQDFITIKDRQKSQVIISKNIDFYQKYKLPNHLVYNSLKKEGLVTQILDRQ---SI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|293376356|ref|ZP_06622593.1| ribosomal protein S4 [Turicibacter sanguinis PC909]
 gi|292645045|gb|EFF63118.1| ribosomal protein S4 [Turicibacter sanguinis PC909]
          Length = 169

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 5/163 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S +GLQL+ KQK++  YG ++E++FR  + +A +  G    N +  LESRLD +VYR 
Sbjct: 12  KISEYGLQLQEKQKLRHAYG-MTERQFRRTYDKAGKLAGKHGENFLYMLESRLDNLVYRL 70

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
               T   ARQ VNH H+ V+G+ V+I SY  K G  I +++KS  LA V  + + A   
Sbjct: 71  GLAATRRQARQLVNHGHITVDGKRVDIPSYSVKPGQTISLREKSANLAVVKASLE-ATIH 129

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            P++++ +   M  T+VR+P   +       +  NL+VEFYSR
Sbjct: 130 RPDFVTFDEATMTGTYVRLPERSE---VFADIHENLIVEFYSR 169


>gi|7576623|gb|AAF63924.1| ribosomal protein system 4 [Homalotheciella subcapillata]
          Length = 190

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAPTIPGARQLVNHRHILINDCIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D + +K + K    + +  +  ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFVTIKNQRKSENIISKNMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|3098160|gb|AAC15528.1| small ribosomal protein 4 [Imbribryum alpinum]
          Length = 188

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGVLPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ V+HRH+LVN R VNI SYR
Sbjct: 57  RSARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVSHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +   L ++   P +++ N         +I   L      +
Sbjct: 117 CKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|157689572|gb|ABV65342.1| ribosomal protein S4 [Terminalia catappa]
          Length = 181

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+
Sbjct: 56  KGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRMVDIPSYRCKPRDI 115

Query: 141 IEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I  +   K  A +       +  +VP++++++         +I  S       + +   L
Sbjct: 116 ITARDDQKSRAMIQNYLDSYSHEEVPKHLTLHPFQSKGVVNQIIDSK---WVGLKINELL 172

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 173 VVEYYSR 179


>gi|33413251|emb|CAD86760.1| ribosomal protein small subunit 4 [Octoblepharum albidum]
          Length = 195

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       K+    +S     +      K S + ++L  KQK++ +YG ++E++ 
Sbjct: 3   KIRRLGILPGLTNKTISQLKSSS--NNQSISNKKVSQYRIRLEEKQKLRFHYG-LTEQQL 59

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE RLD +++R    PTI AARQ VNHR++LVN   VNI
Sbjct: 60  LNYMRVARKTKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPAARQLVNHRYILVNNCIVNI 119

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  DVI +K +      +++  +  ++  +P ++S N         +I   L   
Sbjct: 120 PSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKYKIPNHLSFNALEKKGLVKQI---LDQE 176

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 177 FVGLKINELLVVEYYSR 193


>gi|37548865|gb|AAO32701.1| ribosomal protein 4 [Pogonatum nipponicum]
          Length = 186

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   ALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLXEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRCK
Sbjct: 57  ARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + +  A + +    +++  +P +++ N         +I   L      + +
Sbjct: 117 PQDFITIKNRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|37548841|gb|AAO32689.1| ribosomal protein 4 [Dendroligotrichum squamosum]
 gi|37548843|gb|AAO32690.1| ribosomal protein 4 [Hebantia rigida]
 gi|293634113|gb|ADE60436.1| ribosomal protein subunit 4 [Polytrichastrum torquatum]
          Length = 186

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   ALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK
Sbjct: 57  ARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + +  A +      +++  +P +++ N         +I   L      + +
Sbjct: 117 PQDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|37992677|gb|AAR06517.1| small ribosomal protein 4 [Squamidium brasiliense]
          Length = 189

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D + +K + K    + +  +  ++  +P +++           +I   L      
Sbjct: 117 RCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|293634075|gb|ADE60417.1| ribosomal protein subunit 4 [Polytrichastrum alpinum]
 gi|293634079|gb|ADE60419.1| ribosomal protein subunit 4 [Polytrichastrum alpinum]
          Length = 186

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   ALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK
Sbjct: 57  ARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + +  A +      ++   +P +++ N         +I   L      + +
Sbjct: 117 PQDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|18920741|gb|AAL82415.1| ribosomal protein system 4 [Herzogiella seligeri]
          Length = 193

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 6   LGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 61

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 62  RIARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 121

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 122 CKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGL 178

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 179 KINELLVVEYYSR 191


>gi|254553691|gb|ACT67304.1| ribosomal protein S4 [Joinvillea plicata]
          Length = 181

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P        GL  Q    K S + ++L  KQK++ +YG ++E++       A ++
Sbjct: 1   LTSKTP----RSESGLKNQLHPGKKSQYRIRLEEKQKLRFHYG-LTERQLLRYVHIAGKA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I S+RCK  D+
Sbjct: 56  KRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSFRCKPRDI 115

Query: 141 IEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I  K   +    +  +    A+  +P++++++         +I  S       + +   L
Sbjct: 116 ITTKDDQRSKRLIQNSIASSAQVKLPKHLTIDTLQYKGLVNQIIDSK---WIGLKINELL 172

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 173 VVEYYSR 179


>gi|194738548|gb|ACF93831.1| small ribosomal protein 4 [Leptoscyphus sp. 3 ND-2008]
          Length = 177

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 13/187 (6%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            +PKS    RS            K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LKPKSSYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKT 51

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD+
Sbjct: 52  KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDI 111

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           + ++ + K  + + +   L ++  +P +++ +   +  +  +I +        + +   L
Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELL 168

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 169 VVEYYSR 175


>gi|22854689|gb|AAN09764.1| small ribosomal protein 4 [Chorisodontium setaceum]
 gi|22854691|gb|AAN09765.1| small ribosomal protein 4 [Dichodontium pellucidum]
          Length = 184

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P         ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ +         +I   L      + +  
Sbjct: 117 DFITIKDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|63191797|gb|AAY34858.1| small ribosomal protein subunit 4 [Triquetrella californica]
          Length = 191

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I 
Sbjct: 57  NYVRIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQIVNHRHILVNNRIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +  + K    + +    +++  +P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLAFNSLEKKGLINQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|40204825|emb|CAF02174.1| ribosomal protein small subunit 4 [Andreaea rupestris]
          Length = 188

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++     
Sbjct: 1   LGALPGLTNKTPQLKSGY---MNQFISNKKMSQYRIRLEEKQKLRFHYG-ITERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD +++R     TI  ARQ VNHRH+L+N R VNI SYR
Sbjct: 57  RIARRAKGSTGQILLQLLEMRLDNVIFRLGMASTIPEARQLVNHRHILINDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +    +++  +P ++  N         +I          +
Sbjct: 117 CKPQDFITIKDRQKSQAIITKNIDCSQKYKIPNHLIFNSLQKKGLINQIIDR---ESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|293634023|gb|ADE60391.1| ribosomal protein subunit 4 [Oligotrichum tenuirostre]
          Length = 185

 Score =  154 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKILQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYRCK  
Sbjct: 58  RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +  A + +    +++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|118577585|gb|ABL07158.1| small ribosomal protein 4 [Piper hongkongense]
 gi|118577603|gb|ABL07167.1| small ribosomal protein 4 [Piper montium]
 gi|118577627|gb|ABL07179.1| small ribosomal protein 4 [Piper tricolor]
          Length = 178

 Score =  154 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 1   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 60  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 119

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176


>gi|74273109|gb|ABA01254.1| ribosomal protein S4 [Passiflora pittieri]
          Length = 183

 Score =  154 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++L+ KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIARSAF-------SRPGRKSQYCIRLQEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     R+ +P+++ ++          I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFPREKLPKHLILHRFQYKGLVNEIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|42556484|gb|AAS19837.1| small ribosomal protein 4 [Pleurozia conchifolia]
          Length = 191

 Score =  154 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+     SY   L       K S + ++L  KQK++ +YG ++E++   
Sbjct: 2   RRLGTLPGLTNKTLKLKSSY---LDRSMSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A + +G T   L+  LE RLD  ++R   V TI  ARQ VNHRHVL+N   V+I S
Sbjct: 58  YVRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVSTIPGARQLVNHRHVLINDNIVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y C+ GDVI +K   K  + + +     +R  +P ++ ++         +          
Sbjct: 118 YNCEPGDVIAIKNPEKNKSIITKNMNSFQRPKIPNHLVLDSTQFRGLVNKTIDR---EWI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVEFYSR
Sbjct: 175 DLKINELLVVEFYSR 189


>gi|42718092|gb|AAS38468.1| rps4 [Tayloria stenophysata]
          Length = 189

 Score =  154 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLNSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRVARKAKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K +    A + +  +  ++  +P ++  N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQTSQAIINKNIEFHQKYKIPTHLVYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37992505|gb|AAR06431.1| small ribosomal protein 4 [Duthiella flaccida]
          Length = 188

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|15145854|gb|AAK83545.1| rps4 [Tayloria pseudoalpicola]
          Length = 189

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD IV+R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIAKKAKGSTGEVLLQLLEMRLDNIVFRLGMXPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|328488174|gb|AEB19900.1| small ribosomal protein 4 [Schistochila chlorophylla]
 gi|328488192|gb|AEB19909.1| small ribosomal protein 4 [Schistochila kirkiana]
          Length = 191

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGILPGLTSKILKPKSSY---IDRSTANKKVSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+L+N   V+I 
Sbjct: 57  KYVRIARKAKGSTGQLLLQLLEMRLDNTIFRLGMTTTIPGARQLVNHRHILINNDIVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I +K K K  + +     L ++  +P +++ +   +     +    +    
Sbjct: 117 SYNCELGDIIAIKNKKKSQSMITRNLNLLQKLKIPNHLTFDSTQLRGLVNQ---RIHRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 INLKINELLVVEYYSR 189


>gi|307828434|gb|ADN95014.1| small ribosomal protein 4 [Fossombronia sp. VF-2010]
          Length = 186

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 2   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 59  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + ++  L ++   P +++++   +  +  +           + +  
Sbjct: 119 DVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|11228654|gb|AAG33112.1| small ribosomal protein 4 [Leucoloma rutenbergii]
          Length = 191

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 3   RLGTLPGLTNKIPELKSNS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R   VPTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 59  VRIARKAKGSTGQVLLQLLEMRLDNVIFRLGIVPTIPGARQLVNHRHILVNNRIVNIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K +       L+ +  +++  VP +++ N         +I          
Sbjct: 119 RCKPKDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ESIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|118577613|gb|ABL07172.1| small ribosomal protein 4 [Piper ossanum]
          Length = 184

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + +    V  +   A R ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|307828381|gb|ADN94989.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 187

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 60  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + +   L ++   P +++++   +  +  +           + +  
Sbjct: 120 DVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|7576777|gb|AAF63985.1| small ribosomal protein 4 [Psilopilum laevigatum]
          Length = 189

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGAWPXLTNKTPQLKSGY---INQAVSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VN +H+LVN R VNI SY
Sbjct: 57  VRIAGRAKGSTGPILLQLLEMRLDNIIFRLGMAPTIPGARQLVNPKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A +      +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7109203|gb|AAF36677.1| ribosomal protein 4 [Stegonia latifolia]
          Length = 190

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKXPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +  + K    + +     ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|222103450|gb|ACM44254.1| small ribosomal protein subunit 4 [Sphagnum subsecundum]
          Length = 181

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K+P +  +Y   ++      K S + ++L  KQK++ +YG I+E++     + A R++
Sbjct: 1   TSKTPQSKSNY---INQPISNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARRAK 56

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN  +VNI SYRCK  D I
Sbjct: 57  GSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRCKPQDFI 116

Query: 142 EVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
            +K + K  A +  +   +     P +++++      +  +I          + +   LV
Sbjct: 117 TIKDRQKSQAIITRSMDYSRGYKTPNHLTLDSSQKKGSVNQIIDR---ESIGLKINELLV 173

Query: 201 VEFYSR 206
           VE+YSR
Sbjct: 174 VEYYSR 179


>gi|118577607|gb|ABL07169.1| small ribosomal protein 4 [Piper mutabile]
          Length = 178

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 1   KRPRSESSLRTQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 60  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 119

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176


>gi|307828398|gb|ADN94997.1| small ribosomal protein 4 [Fossombronia truncata]
 gi|307828430|gb|ADN95012.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 187

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 60  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + +   L ++   P +++++      +  +           + +  
Sbjct: 120 DVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRFRGSINQTIDRD---WINLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|307828407|gb|ADN95001.1| small ribosomal protein 4 [Fossombronia pusilla]
 gi|307828440|gb|ADN95016.1| small ribosomal protein 4 [Fossombronia pusilla]
          Length = 185

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 58  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + ++  L ++   P +++++   +  +  +           + +  
Sbjct: 118 DVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|16565385|gb|AAL26207.1|AF313607_1 small ribosomal protein 4 [Lygodium lanceolatum]
          Length = 196

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 11/199 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K+    ++   G     RK   S F ++L AKQ+++  YG  +E +   
Sbjct: 2   RRLKDLPGLTSKTSNPKKTRIDGDPSASRK--TSQFCIRLEAKQRLRFNYGS-TECQLLR 58

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A ++ G T    +  LE RLD IV+R    PTI AARQ VNHRH+ VN R V+I S
Sbjct: 59  YIRIARKAEGSTGQVSLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIPVNNRIVDIPS 118

Query: 133 YRCKEGDVIEVKQKSKQLASVLEA--SQLAERDVPEYISV---NHDNMVATFVRIPSSLK 187
           YRCK  D+I  K       ++           ++P+++++     D    +   I +   
Sbjct: 119 YRCKPKDIIASKGLLTPSGTLKSIGTESFKRNEIPDHLTLFAAEADQTKGSVNGIVNR-- 176

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 177 -ESIHLNINELLVVEYYSR 194


>gi|7576643|gb|AAF63934.1| ribosomal protein system 4 [Hookeria acutifolia]
          Length = 189

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G         P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGVLPGLTNNIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+ VN   VNI S
Sbjct: 57  YVRIARRAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIGVNNCIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K  A + +  +  ++   P +++ +         RI   L     
Sbjct: 117 YRCKPQDFITIKNQQKSEAIISKNIEFYQKFKRPNHLTYSSLEKKGLVNRI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|297522434|gb|ADI44666.1| small ribosomal protein 4 [Micromitrium tenerum]
          Length = 184

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G        +S         +K   S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   PGLTNKTPQLKSGSINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 58  AKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  + V++    +++  VP +++ N         +I   L      + +   
Sbjct: 118 FITIKDRQKSQSMVIKNIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIGLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|118577641|gb|ABL07186.1| small ribosomal protein 4 [Macropiper melanostachyum]
          Length = 179

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 2   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQI 60

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 61  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 177


>gi|157689552|gb|ABV65332.1| ribosomal protein S4 [Ruptiliocarpon caracolito]
          Length = 180

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 3   KRPRAGNDLRSQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 61

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 62  LLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQ 121

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           K  A +      +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 122 KSRALIQNYLDSSSHEELPKHLTLHTFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 178


>gi|118577599|gb|ABL07165.1| small ribosomal protein 4 [Piper methysticum]
          Length = 179

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 2   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQI 60

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 61  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 RSKVLVQNSMDFASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 177


>gi|67035961|gb|AAY62907.1| small ribosomal protein subunit 4 [Thamnobryum ellipticum]
          Length = 188

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|115380404|ref|ZP_01467397.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
 gi|310817857|ref|YP_003950215.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
 gi|115362588|gb|EAU61830.1| ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
 gi|309390929|gb|ADO68388.1| 30S ribosomal protein S4 [Stigmatella aurantiaca DW4/3-1]
          Length = 207

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 10/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-----KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           M++    + +  RR+   L         K P   R Y PG HG  +K+K + +GL++  K
Sbjct: 1   MARYTGPRGRRARRLFVALTHLSTKDPDKDPSLRRPYPPGQHGPTQKTKMTDYGLRMMEK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K  Y ++ EK+ R     A RS  + +  LI+ +ESR D +V RA +  +I  ARQF
Sbjct: 61  QKLKLSY-ELLEKQCRRYVDRAKRSGSNATQVLITLIESRFDAMVLRAGYATSIRQARQF 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDN 174
           V H +  V+G+  N+     K G  +E++++ +Q   VL+  +  A R VP ++++    
Sbjct: 120 VRHGYFTVDGKKANLPGMEFKPGTTVELRERFRQHPLVLQVREKTAHRGVPSHVALLEG- 178

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
                 R+ +  +D+  PV +    ++EFY
Sbjct: 179 --GKGFRVLTRPEDIDPPVALDLAKIIEFY 206


>gi|12330498|gb|AAG52786.1| ribosomal protein 4 [Pentastichella pentasticha]
          Length = 189

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +      +  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQDIITKNIDFYXKYXIPNHLTYNSLEKNGFVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576583|gb|AAF63904.1| ribosomal protein system 4 [Schwetschkeopsis fabronia]
          Length = 188

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGILPGLTNKTPQLNSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576535|gb|AAF63880.1| ribosomal protein system 4 [Garovaglia elegans]
          Length = 190

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T    +   E RLD I++R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 57  NYVRIARKTKGSTGEVSLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I VK +      + +     ++  +P +++           +I   L    
Sbjct: 117 SYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|7576531|gb|AAF63878.1| ribosomal protein system 4 [Ptychomnion aciculare]
          Length = 190

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 57  NYVRIARKTKGSTGEVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDSIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K +      + +     ++  +P +++ +         +I   L    
Sbjct: 117 SYRCKPQDFIIIKDEKNYEGIINKNEDFYQKSKIPNHLTYSFLEKKGLVNKI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|63191787|gb|AAY34853.1| small ribosomal protein subunit 4 [Lyellia crispa]
          Length = 188

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+      Y    +      K S + ++L  KQK++ +YG I+E++     
Sbjct: 1   LGALPGLTNKTSQLKSGYS---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A  ++G T   L+  LE RLD I+++    PTI  ARQ VNH+H+LVN R VNI SYR
Sbjct: 57  RIARGAKGSTGQILLQLLEMRLDNIIFQLGMAPTIPGARQLVNHKHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +     ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAIIAKNIDFYQKYKIPNHLTFNSLEQKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|121761867|gb|ABM65019.1| ribosomal protein S4 [Plagiomnium cf. tezukae Harris 859]
          Length = 186

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGPTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE+RLD I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGEVLLQLLETRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +     ++  +P++++ N  N      +I          + +  
Sbjct: 119 DFITIKDRQKSQTMISKNIDFYQKSKIPDHLTYNSLNKKGLVNQILDRD---SIDLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|7576657|gb|AAF63941.1| ribosomal protein system 4 [Brachythecium plumosum]
          Length = 188

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGILPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|254935389|gb|ACT88082.1| ribosomal protein S4 [Fatsia japonica]
 gi|254935391|gb|ACT88083.1| ribosomal protein S4 [Raukaua anomalus]
 gi|254935393|gb|ACT88084.1| ribosomal protein S4 [Schefflera digitata]
 gi|254935421|gb|ACT88098.1| ribosomal protein S4 [Pseudopanax colensoi var. ternatus]
 gi|254935423|gb|ACT88099.1| ribosomal protein S4 [Pseudopanax colensoi var. ternatus]
 gi|254935425|gb|ACT88100.1| ribosomal protein S4 [Pseudopanax colensoi var. colensoi]
 gi|254935429|gb|ACT88102.1| ribosomal protein S4 [Pseudopanax laetus]
 gi|254935431|gb|ACT88103.1| ribosomal protein S4 [Pseudopanax macintyrei]
 gi|254935435|gb|ACT88105.1| ribosomal protein S4 [Pseudopanax arboreus]
 gi|254935437|gb|ACT88106.1| ribosomal protein S4 [Meryta sinclairii]
 gi|254935439|gb|ACT88107.1| ribosomal protein S4 [Meryta denhamii]
 gi|254935445|gb|ACT88110.1| ribosomal protein S4 [Pseudopanax colensoi var. fiordensis]
 gi|254935447|gb|ACT88111.1| ribosomal protein S4 [Meryta latifolia]
 gi|254935453|gb|ACT88114.1| ribosomal protein S4 [Pseudopanax kermadecensis]
          Length = 181

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  +   +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179


>gi|293634069|gb|ADE60414.1| ribosomal protein subunit 4 [Polytrichadelphus longisetus]
          Length = 184

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P     Y        +K   S + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   GLTNKTPQLKSGYINQQTLSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D
Sbjct: 58  AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKPQD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + +  A ++     +++  +P +++ N         +I   L      + +   
Sbjct: 118 FITIKDRQESQAIIIRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|48927195|emb|CAE47533.1| small ribosomal protein 4 [Equisetum diffusum]
          Length = 207

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I  R   NL G     V ++      + Q  + K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQASGNDQSNQKKVSQYCIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V+I S+ CK  D+I +       + + +  +  A+  +P+++++         
Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEQKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|151370788|gb|ABS11012.1| ribosomal protein subunit 4 [Rhizogonium novae-hollandiae]
          Length = 194

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGILPGLTNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +     ++  +P ++  N         +I   L 
Sbjct: 117 DIPSYRCKPQDFITIKDQQKYQTIISKNINFYQKYKIPNHLIYNSLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIDLKINELLVVEYYSR 192


>gi|7576659|gb|AAF63942.1| ribosomal protein system 4 [Loeskeobryum brevirostre]
          Length = 186

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++     +K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---VNQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++   P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNQQKSETIISKNIEFYQKSKXPNHLTYNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|307828403|gb|ADN94999.1| small ribosomal protein 4 [Fossombronia densa]
          Length = 185

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   LPGLTNRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 58  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + +   L ++   P +++++   +  +  +           + +  
Sbjct: 118 DVITVRNRHKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|32401773|gb|AAP80875.1| small ribosomal protein 4 [Picea rubens]
          Length = 191

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 9/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+        K P N +        +    K S + ++   KQK++ +YG ++E++ 
Sbjct: 1   LIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRFHYG-LTERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE R D I+++    PTI  ARQ VNH H+ VN   V+I
Sbjct: 56  LKYVRIARRAKGSTGQVLLQLLEMRSDNIIFQLGMAPTIPGARQLVNHGHIRVNDHMVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK  DVI ++ + +    + +   L +RD +P +++ +         +I  S    
Sbjct: 116 PSYPCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFINQIIDSK--- 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 WISLKINELLVVEYYSR 189


>gi|22854719|gb|AAN09779.1| small ribosomal protein 4 [Leucobryum albidum]
          Length = 186

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  + V +  + +++  VP +++ N         +I   L      + +  
Sbjct: 119 DFISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|63191785|gb|AAY34852.1| small ribosomal protein subunit 4 [Bartramiopsis lescurii]
          Length = 185

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S         +K   S + ++L  KQK++ +YG I+E++     + A 
Sbjct: 1   LPGLTNKTTQLKSGYSNQSVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
            ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  
Sbjct: 58  GAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +    +++  +P ++++N         +I   L      + +  
Sbjct: 118 DFITIKDQQKSQAIIAKNMNFSQKYKIPNHLTLNSLEKKGLVNQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|227345119|gb|ACP28112.1| small ribosomal protein 4 [Chiloscyphus helmsianus]
          Length = 183

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+     +Y   +       K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKTLKPKSNY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD
Sbjct: 57  AKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSYNCEPGD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +        + +   
Sbjct: 117 IITIRDKHKSQSMITKNINLFQKLKIPSHLTFDSIKLQGSVNQMINR---EWINLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|37548833|gb|AAO32685.1| ribosomal protein 4 [Atrichum oerstedianum]
          Length = 187

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S + ++L  KQK++ +YG I+E+   +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERXLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A +       ++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNRQEXQAIITXNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLE 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|18920765|gb|AAL82427.1| ribosomal protein system 4 [Plagiothecium conostegium]
          Length = 193

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
            G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 6   FGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 61

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 62  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 121

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  +  ++  +P +++ +         +I   L      +
Sbjct: 122 CKPQDFITIKNQRKSEAIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 178

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 179 KINELLVVEYYSR 191


>gi|58293865|gb|AAW69880.1| small ribosomal protein 4 [Macrocoma tenuis]
          Length = 189

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNQRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P ++  N         +I          
Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLVYNSLEKKGLVNQIVDR---ELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|3098162|gb|AAC15529.1| small ribosomal protein 4 [Bryum caespiticium]
          Length = 189

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPRLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +   L ++   P +++ N         +I   L      
Sbjct: 117 RCKPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|307828422|gb|ADN95008.1| small ribosomal protein 4 [Fossombronia alata]
          Length = 187

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 60  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 119

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + +   L ++   P +++++   +  +  +           + +  
Sbjct: 120 DVITVRNRHKSQSIIAKNMSLFQKPRTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|225571581|ref|ZP_03780577.1| hypothetical protein CLOHYLEM_07679 [Clostridium hylemonae DSM
           15053]
 gi|225159658|gb|EEG72277.1| hypothetical protein CLOHYLEM_07679 [Clostridium hylemonae DSM
           15053]
          Length = 181

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           +R   K S +GLQLR KQK K  YG + EK FR+ + +A +  G T  NL+  LESRLD 
Sbjct: 17  KRSNRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYTKAKQMSGMTGENLMILLESRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +V+R     T   ARQ V+H+HV+VNG+ +NI SY  K GDV+E+K+K K         +
Sbjct: 76  VVFRMGLARTRREARQIVDHKHVMVNGKQINIPSYIVKAGDVVEIKEKHKSSPRYKGILE 135

Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               R VP+++ V+ +N+  T   +P+        V +   L+VE YS+
Sbjct: 136 VTGGRLVPDWLEVDTENLKGTVKELPARDA---IDVPVDEMLIVELYSK 181


>gi|157689478|gb|ABV65295.1| ribosomal protein S4 [Floerkea proserpinacoides]
          Length = 186

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 9/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P         L  Q    K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GTLPGLTSKRP----KTVSDLRNQPHFGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 56  IAGKAKGSTGLVLLQLLEMRLDNILFRLGMALTIPQARQLVNHRHILVNNHIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I VK + K  A +   +  +   + P++++ +         +I          + 
Sbjct: 116 KPQDSITVKNEQKSRALIQNFNDSSVHEEFPKHLTRHTFQYEGLVNQIIDRN---WVGLK 172

Query: 195 MQPNLVVEFYSR 206
           +   L+VE+YSR
Sbjct: 173 INELLIVEYYSR 184


>gi|67035668|gb|AAY62765.1| small ribosomal protein subunit 4 [Campylopus filifolius]
          Length = 186

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN   VNI SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  + +    + +++  VP +++ N         +I   L      + +  
Sbjct: 119 DFITIKNRQKSQSIIARNLEFSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLNINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|51860509|gb|AAU11391.1| ribosomal protein small subunit 4 [Ephedra antisyphilitica]
          Length = 205

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62
               + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +Y
Sbjct: 3   YRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 58

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L
Sbjct: 59  G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 117

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177
           VN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N      
Sbjct: 118 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 177

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  +       + ++  LV+E+YSR
Sbjct: 178 IVNKIIDTKD---LQLKIKEMLVIEYYSR 203


>gi|255116230|gb|ACU01167.1| small ribosomal protein subunit 4 [Rhytidiadelphus triquetrus]
          Length = 186

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTSKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK
Sbjct: 57  ARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|118577591|gb|ABL07161.1| small ribosomal protein 4 [Piper leucophyllum]
          Length = 183

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  
Sbjct: 56  KAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  + + +    V  +   A R ++P++++++         +I  S       + +  
Sbjct: 116 DIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|254935433|gb|ACT88104.1| ribosomal protein S4 [Pseudopanax arboreus]
          Length = 181

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEXKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  +   +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179


>gi|58293863|gb|AAW69879.1| small ribosomal protein 4 [Matteria gracillima]
          Length = 189

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P ++  N         +I   L      
Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|307828426|gb|ADN95010.1| small ribosomal protein 4 [Fossombronia truncata]
          Length = 185

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 58  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + +   L ++   P +++++   +  +  +           + +  
Sbjct: 118 DVITVRNRQKSQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|194738510|gb|ACF93812.1| small ribosomal protein 4 [Leptoscyphus azoricus]
 gi|194738512|gb|ACF93813.1| small ribosomal protein 4 [Leptoscyphus azoricus]
 gi|194738514|gb|ACF93814.1| small ribosomal protein 4 [Leptoscyphus azoricus]
 gi|194738516|gb|ACF93815.1| small ribosomal protein 4 [Leptoscyphus azoricus]
 gi|194738538|gb|ACF93826.1| small ribosomal protein 4 [Leptoscyphus jackii]
 gi|194738540|gb|ACF93827.1| small ribosomal protein 4 [Leptoscyphus jackii]
 gi|194738542|gb|ACF93828.1| small ribosomal protein 4 [Leptoscyphus physocalyx]
 gi|194738546|gb|ACF93830.1| small ribosomal protein 4 [Leptoscyphus porphyrius]
          Length = 177

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  +I +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175


>gi|118577637|gb|ABL07184.1| small ribosomal protein 4 [Macropiper latifolium]
 gi|118577643|gb|ABL07187.1| small ribosomal protein 4 [Macropiper puberulum f. glabrum]
          Length = 178

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 1   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQI 59

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 60  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 119

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176


>gi|33413235|emb|CAD86753.1| ribosomal protein small subunit 4 [Hypodontium pomiforme]
          Length = 185

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 8/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKKPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK 
Sbjct: 57  RKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKP 116

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + K  A +++    +++  VP +++ N         +I   L      + + 
Sbjct: 117 QDFITIKDRQKYQAMIIKNLDFSQKTKVPNHLTFNFLEKNGLVNQI---LDQESIGLKIN 173

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 174 ELLVVEYYSR 183


>gi|37992413|gb|AAR06385.1| small ribosomal protein 4 [Aerobryopsis capensis]
          Length = 188

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|67035827|gb|AAY62844.1| small ribosomal protein subunit 4 [Acroporium pungens]
          Length = 190

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P   R      +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKIP---RLKSSSSNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  ++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLKINELLVVEYYSR 188


>gi|162415090|gb|ABX89119.1| ribosomal protein S4 [Syntrichia gemmascens]
          Length = 189

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +    K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINDSKKSQVMITKNVDSFQKSKIPNHLTFNSLEKKGLINQI---LNQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|11121333|emb|CAC14832.1| ribosomal protein subunit 4 [Splachnum ampullaceum]
          Length = 195

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G  L G     +  +S            K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVRIIRRLGV-LPGLTNKTLQLKSSPINQ--STSNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLNYVRIARHAKGSTGEVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNERV 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+  SYRCK  D I +K + K    + +  +  ++  +P ++  N         +I    
Sbjct: 117 VDRPSYRCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDRQ 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+ SR
Sbjct: 177 ---SIGLKINELLVVEYXSR 193


>gi|12330544|gb|AAG52809.1| ribosomal protein 4 [Paludella squarrosa]
 gi|42718112|gb|AAS38478.1| rps4 [Paludella squarrosa]
          Length = 188

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLTYNSLKKQGLINQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   +VVE+YSR
Sbjct: 174 KINELIVVEYYSR 186


>gi|74273145|gb|ABA01272.1| ribosomal protein S4 [Passiflora truncata]
          Length = 183

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPGVRSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ ++         +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILSPKKYKGLVNQIIDSK---SVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|42718054|gb|AAS38449.1| rps4 [Splachnum sphaericum]
          Length = 189

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P ++  N         +I          
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|32401808|gb|AAP80892.1| small ribosomal protein 4 [Kadsura japonica]
          Length = 184

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G     Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RPGSDPRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRLVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D+I  + + +  A +  +   +   ++P++++++         +I  S       + + 
Sbjct: 116 RDIITTRDEHRSRALIQNSIDSSPNEELPKHLTLHSLQYKGLVNQIIDSK---WVGLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|32401769|gb|AAP80873.1| small ribosomal protein 4 [Tsuga mertensiana]
          Length = 191

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 12/197 (6%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+        K P +             + K S + ++   KQK++  YG ++E++ 
Sbjct: 4   IIRRLKTLPGLTSKRPKSRNDSI-------NRRKISQYRIRPEEKQKLRFNYG-LTERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I
Sbjct: 56  LKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK  DVI ++ + +  A + +   L +RD +P++++ N         +I  S    
Sbjct: 116 PSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK--- 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 WISLKINELLVVEYYSR 189


>gi|22854685|gb|AAN09762.1| small ribosomal protein 4 [Ceratodon purpureus]
          Length = 186

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK
Sbjct: 57  ARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    +++ +  +++  VP +++ N         +I   L      + +
Sbjct: 117 PQDFITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI---LDQESVGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|67035759|gb|AAY62810.1| small ribosomal protein subunit 4 [Ulota phyllantha]
          Length = 188

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGXLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H++VN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNXRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I ++ + K    + +     ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIRNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|283549382|dbj|BAI66353.1| small ribosomal protein 4 [Metacalypogeia cordifolia]
          Length = 188

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKPKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A + +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYVRIARKVKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY  + GD+I V+ K K  + + +     ++  +  +++ +   +     +  +  
Sbjct: 117 VDIPSYNREPGDIITVRNKQKSQSIISKNVNSFQKSKISSHLNFDSKELRGFVNQTINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWIDLKINELLVV 188


>gi|167759834|ref|ZP_02431961.1| hypothetical protein CLOSCI_02197 [Clostridium scindens ATCC 35704]
 gi|167662453|gb|EDS06583.1| hypothetical protein CLOSCI_02197 [Clostridium scindens ATCC 35704]
          Length = 181

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/169 (41%), Positives = 96/169 (56%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           +R   K S +GLQLR KQK K  YG + EK FR+ FK+A    G T  NL+  LESRLD 
Sbjct: 17  KRSNRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYFKKASHMSGMTGENLMVLLESRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +V+R     T   ARQ V+H+H+LVNG+ +NI SY  K GDVIE+K+K K      E  +
Sbjct: 76  VVFRLGLARTRREARQIVDHKHILVNGKQINIPSYLIKAGDVIEIKEKHKSSPRYKEIVE 135

Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               R VP+++  + +N+  T   +P         V +   L+VE YS+
Sbjct: 136 VTGGRLVPDWLEADLENLKGTVKELPKR---EAIDVPVDEMLIVELYSK 181


>gi|37992725|gb|AAR06541.1| small ribosomal protein 4 [Weymouthia mollis]
          Length = 188

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    +       K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---IIQSXSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|22854711|gb|AAN09775.1| small ribosomal protein 4 [Holomitrium calycinum]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSGSINQ--STSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ +         +I   L      + +  
Sbjct: 118 DFITIKDRQKSQAMIIKNIDFSQKSKIPNHLAFSFLEKKGLVNQI---LDQESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|241518581|ref|YP_002979209.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862994|gb|ACS60658.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 146

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 98/138 (71%), Positives = 113/138 (81%), Gaps = 1/138 (0%)

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +FR IF EA+R RGDTS NLI+ LESRLD IVYRAKF PT FAARQF+NH HV+VNG  V
Sbjct: 10  QFRRIFNEANRLRGDTSENLIALLESRLDAIVYRAKFAPTPFAARQFINHGHVIVNGMRV 69

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           NI SYRCK GDVIEV+ KSKQLA VLE+  LAERDVP+YI+ +H+ M ATF R+P+ L D
Sbjct: 70  NISSYRCKAGDVIEVRPKSKQLAVVLESVGLAERDVPDYIAADHNKMTATFSRVPA-LAD 128

Query: 189 VPYPVIMQPNLVVEFYSR 206
           VP+ VIM+P LVVEFYSR
Sbjct: 129 VPFAVIMEPQLVVEFYSR 146


>gi|7576613|gb|AAF63919.1| ribosomal protein system 4 [Trichosteleum papillosum]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G  L    K+P    S     + Q    K S + ++L  KQK++ YYG I+E++  +
Sbjct: 1   RRLGTLLGLTNKTPQLKSSS---SNQQTSNKKISQYRIRLEEKQKLRFYYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNSMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + K    + +  +  E+  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITIKNQRKSETIINKNIEFYEKSKIPNHLTYNSLEKKGLINKI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|293633999|gb|ADE60379.1| ribosomal protein subunit 4 [Notoligotrichum bellii]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTLQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYRCK  
Sbjct: 58  RAKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +  A + +    +++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|77019203|emb|CAH60207.1| chloroplast 30S ribosomal protein S4 [Grimmia alpestris]
          Length = 184

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ N         +I   L      + +  
Sbjct: 117 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLVNQI---LDHESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|77019181|emb|CAH60196.1| chloroplast 30S ribosomal protein S4 [Grimmia lisae]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   PGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R +NI SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIINIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  + +++    +++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQKSQSIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|222103420|gb|ACM44239.1| small ribosomal protein subunit 4 [Amblystegium serpens]
          Length = 202

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 16  GTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 71

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 72  IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 131

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 132 KPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 188

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 189 INELLVVEYYSR 200


>gi|78102643|gb|ABB21535.1| small ribosomal protein 4 [Plagiochila drepanophylla]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +   Y   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLSSKTLKSKSGY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY+C+ GD+I +  K K  A V +     ++  +  +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYKCEPGDIITIGNKQKSRAIVTKNINSFQKLKISGHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLVVE 202
                 + +   LVVE
Sbjct: 176 --EWINLKINELLVVE 189


>gi|297522436|gb|ADI44667.1| small ribosomal protein 4 [Micromitrium megalosporum]
          Length = 184

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G        +S            K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   PGLTNKTSQLKSNSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 58  AKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  + V++  + +++  VP +++ N         +I   L      + +   
Sbjct: 118 FITIKDRQKSQSMVIKNIEFSQKYKVPNHLTFNSLEKKGLINQI---LNHESIGLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|293634121|gb|ADE60440.1| ribosomal protein subunit 4 [Polytrichum ericoides]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 8/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK 
Sbjct: 57  RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKP 116

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + +  A +      +++  +P +++ N         +I   L      + + 
Sbjct: 117 QDFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKIN 173

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 174 ELLVVEYYSR 183


>gi|293634107|gb|ADE60433.1| ribosomal protein subunit 4 [Polytrichastrum sphaerothecium]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 8/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VNI SYRCK 
Sbjct: 57  RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDCIVNIPSYRCKP 116

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + +    +      +++  +P +++ N         +I   L      + + 
Sbjct: 117 QDFITIKDRQESQTIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESISLKIN 173

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 174 ELLVVEYYSR 183


>gi|33413213|emb|CAD86741.1| ribosomal protein small subunit 4 [Ditrichum heteromallum]
          Length = 187

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GILPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I  K + K  A +++  +  ++  VP +++ N         +I   L      + 
Sbjct: 117 KPQDFITSKNRPKSQAMIIKNVEFYQKYKVPNHLTFNSLEKKGLVNQI---LDQESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|229825290|ref|ZP_04451359.1| hypothetical protein GCWU000182_00644 [Abiotrophia defectiva ATCC
           49176]
 gi|229790662|gb|EEP26776.1| hypothetical protein GCWU000182_00644 [Abiotrophia defectiva ATCC
           49176]
          Length = 198

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 16/210 (7%)

Query: 1   MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           M++      K  R +G      G  K    T        G  R+    Y G QLR KQK 
Sbjct: 1   MARDMVPVLKRCRALGIEPMVMGLDKKSNRT-------AGNSRRKISEY-GAQLREKQKA 52

Query: 59  KKYYGDISEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           K  YG + EK FR+ F  A + + G T  NL+  LE RLD +++R     T   ARQ V 
Sbjct: 53  KFIYGVL-EKPFRNNFARAQKLKYGTTGENLMILLELRLDNVIFRLGLARTRKEARQMVG 111

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMV 176
           H+ VLVNG+ VNI SY    GD IE+K+K K +  + +  +    R VP ++ ++ +N+ 
Sbjct: 112 HKMVLVNGKQVNIPSYTVAVGDKIEIKEKKKSIQRIKDVLEATNGRLVPAWLEMDRENLT 171

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           AT   IP+  +     V +    +VE YS+
Sbjct: 172 ATVKEIPTRDQ---IDVPVDEVFIVELYSK 198


>gi|49182793|gb|AAT57858.1| small ribosomal protein [Riccia fluitans]
          Length = 187

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+  +   Y   ++      K S + ++L  KQ ++ +YG ++E++     +
Sbjct: 1   GALPGLTNKTFKSKSGY---INQSTSNKKXSQYRIRLEEKQNLRFHYG-LTERQLLKYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+L+N  +V+I SY C
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHQHILINNNTVDIPSYNC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I +K + K  + + +     ++  +P +++ +         +I          + 
Sbjct: 117 KPKDIITIKDRQKSQSIITKNLNFFQKQKIPNHLTFDLIQFKGLINQIVDR---ECIYLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|33413231|emb|CAD86751.1| ribosomal protein small subunit 4 [Didymodon asperifolius]
          Length = 190

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLSNKIPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +  + K    + +    +++  +P +++ N         +I   L     
Sbjct: 117 YRCKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|12330520|gb|AAG52797.1| ribosomal protein 4 [Scouleria aquatica]
          Length = 188

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGVLPGLTNKTPQLKSSS---TNQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYI 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +    +++  VP +++ N         +I   L      +
Sbjct: 117 CKPLDFITIKNRQKSQAIISKNINFSQKYKVPTHLTFNSLQKKGLVNQI---LNRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|293634093|gb|ADE60426.1| ribosomal protein subunit 4 [Polytrichastrum norwegicum]
 gi|293634099|gb|ADE60429.1| ribosomal protein subunit 4 [Polytrichastrum papillatum]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 8/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK 
Sbjct: 57  RRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKP 116

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + +  A +      ++   +P +++ N         +I   L      + + 
Sbjct: 117 QDFITIKDRQESQAIIARNIDFSQNYKIPNHLTFNSLEKKGLVNQI---LDRESINLKIN 173

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 174 ELLVVEYYSR 183


>gi|184128031|gb|ACC67915.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 194

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K+  + ++       Q    K S + ++L AKQ+++  +G ++E++   
Sbjct: 1   RRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I S
Sbjct: 58  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKD 188
           YRCK  D+I V+ ++     V +  +   +D +PE+++++    +       RI +    
Sbjct: 118 YRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD-- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 -SIGLDINELLVVEYYSR 192


>gi|58293901|gb|AAW69897.1| small ribosomal protein 4 [Groutiella chimborazensis]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P   R     ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTP---RLKSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNYRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P ++  N         +I   L      
Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKSKIPNHLIYNSLEKKGLVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576533|gb|AAF63879.1| ribosomal protein system 4 [Glyphothecium sciuroides]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN   VNI S
Sbjct: 57  YVRIARKTKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K +      + +     ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDFIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|194738530|gb|ACF93822.1| small ribosomal protein 4 [Leptoscyphus hexagonus]
          Length = 177

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDLVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  +I +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175


>gi|92417451|gb|ABE76821.1| ribosomal protein subunit 4 [Atrichum undulatum]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLXALPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SY
Sbjct: 57  VRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + +  A        +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQEFQAITTRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LEINELLVVEYYSR 187


>gi|12330548|gb|AAG52811.1| ribosomal protein 4 [Brachelyma subulatum]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E R D +++R     TI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMALTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++           +I   L      
Sbjct: 117 RCKPQDFITIKNQQKSEAIISKNIEFYKKYKIPNHLTYISLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|58293867|gb|AAW69881.1| small ribosomal protein 4 [Cardotiella quinquefaria]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P ++  N         +I   L      
Sbjct: 117 RCKPLDFITIKDRRKSQDIINKNIDFYQKYKIPNHLIYNSLEKKGLVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|194738496|gb|ACF93805.1| small ribosomal protein 4 [Leptoscyphus antarcticus]
          Length = 177

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 13/187 (6%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            +PKS    RS            K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LKPKSSYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKA 51

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD+
Sbjct: 52  KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSYNCEPGDI 111

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           + ++ + K  + + +   L ++  +P +++ +   +  +  ++ +        + +   L
Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINR---EWINLKINELL 168

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 169 VVEYYSR 175


>gi|108861124|gb|ABG21434.1| ribosomal protein small subunit 4 [Pilularia americana]
 gi|166836606|gb|ABY90535.1| ribosomal protein small subunit 4 [Pilularia americana]
 gi|166836608|gb|ABY90536.1| ribosomal protein small subunit 4 [Pilularia americana]
 gi|166836616|gb|ABY90540.1| ribosomal protein small subunit 4 [Pilularia novae-hollandiae]
 gi|166836618|gb|ABY90541.1| ribosomal protein small subunit 4 [Pilularia novae-zelandiae]
          Length = 200

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K+    ++       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKIIRRLKSLPGLTGKASKQKKTRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD +V+     PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P ++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198


>gi|125662696|gb|ABN50298.1| small ribosomal protein 4 [Larix gmelinii var.
           principis-rupprechtii]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K P     Y      +    K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I S
Sbjct: 56  YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  D I ++ + +    + +   L +RD +P +++ N         +I  S      
Sbjct: 116 YPCKPQDEITIRDQQRLRTIIRKNIDLLQRDKLPNHLTFNSLQYKGFINQIIDSK---WI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 SLKINELLVVEYYSR 187


>gi|12330476|gb|AAG52775.1| ribosomal protein 4 [Splachnobryum obtusum]
          Length = 188

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L G     +N +S         +K   S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGT-LPGLSNKTLNLKSSFTNQSSSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKTKGSTGQILLQLLEMRLDNVLFRLGMATTIPGARQLVNHRHILVNKRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +    +++  +P ++  N         +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQIMINKTVDFSQKPKIPNHLIFNSLEKKGLVNQI---LDQESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|12330556|gb|AAG52815.1| ribosomal protein 4 [Pterobryella praenitens]
          Length = 189

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSGS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + + +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRISRKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +     ++  +P +++ +         +I   L      
Sbjct: 117 RCKLHDFITIKDRQKSQTIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|227485499|ref|ZP_03915815.1| ribosomal protein S4 [Anaerococcus lactolyticus ATCC 51172]
 gi|227236498|gb|EEI86513.1| ribosomal protein S4 [Anaerococcus lactolyticus ATCC 51172]
          Length = 197

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +   +K  R +G +      +  + R+        +R+SK S +G+Q R KQK K 
Sbjct: 1   MAVSKDPVYKRARALGISPAYLGYAGSSNRALP------KRRSKLSEYGMQQREKQKAKF 54

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG +SEK+FR  + +A R +G T   LI   E RLD + +R+    T   ARQ V H H
Sbjct: 55  IYG-VSEKQFRGYYDKASRMKGQTGEQLIILCERRLDNVAFRSGLARTRREARQIVTHGH 113

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATF 179
           +LVNG+ V+I SY  +EGDVIEV++KSK         ++ A   V E+++ + +N+    
Sbjct: 114 LLVNGKQVDIPSYLIEEGDVIEVREKSKSSTLFKTIKEVNAAFGVVEWLNSDIENLKVKV 173

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + P+  +     + ++  ++VEFYS+
Sbjct: 174 EKFPTREE---IDIPVEERMIVEFYSK 197


>gi|92417445|gb|ABE76818.1| ribosomal protein subunit 4 [Conocephalum conicum]
          Length = 186

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     + ++S         +K   S + ++L  KQK++ ++G ++E++     + A 
Sbjct: 2   LPGLTNKTLKSKSGYINQSISNKK--VSQYRIRLEEKQKLRFHFG-LTERQLLKYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I SY CK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNITVDIPSYNCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI +K + K  + + +  +  ++  +P ++S +   +     +I          + +  
Sbjct: 119 DVITIKDRQKSQSIITKNLKSFQKSKIPNHLSFDLIQIKGLVNQIIDR---EWILLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|42556494|gb|AAS19842.1| small ribosomal protein 4 [Radula complanata]
 gi|118626059|emb|CAL41750.1| small ribosomal protein 4 [Radula complanata]
          Length = 191

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+    +     +       K S + ++L  KQK++ +YG ++EK+  
Sbjct: 1   IRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRFHYG-LTEKQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H ++N  +VNI 
Sbjct: 57  KYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I V+ + K  + + +   L ++ ++P +++ +   +  +  +    +    
Sbjct: 117 SYNCELGDIITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDYNS 173

Query: 191 YPVIMQPNLVVEFYSR 206
               +   LVVE+YSR
Sbjct: 174 INFKINELLVVEYYSR 189


>gi|37548829|gb|AAO32683.1| ribosomal protein 4 [Buxbaumia piperi]
          Length = 187

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P     Y    +      K S + ++L  KQK++ +YG I+E++     +
Sbjct: 1   GXXPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRC
Sbjct: 57  IARAAKGSTGQILLQSLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K   K    + +  +L++R  +P ++++N         +I   L      + 
Sbjct: 117 KPQDFITIKNSQKSQTIITKNIELSQRYKIPNHLTLNSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|254516934|ref|ZP_05128992.1| ribosomal protein S4 [gamma proteobacterium NOR5-3]
 gi|219674439|gb|EED30807.1| ribosomal protein S4 [gamma proteobacterium NOR5-3]
          Length = 154

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 5/158 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QLR KQK+++ YG + EK+FR+ +KEA R +G T  NL+  LESRLD +VYR  F  T 
Sbjct: 1   MQLREKQKVRRIYGVL-EKQFRNYYKEAARLKGATGENLLQLLESRLDNVVYRIGFGSTR 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYI 168
             +RQ V H+ +LVNG+ VNI SY+ K GDV+ +++K+K+   V  A  L A+R  PE+I
Sbjct: 60  SESRQLVAHKAILVNGKVVNIASYKVKAGDVVSLREKAKKQLRVQSAMALAAQRGEPEWI 119

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +N + + A +   P           +  NL+VE YS+
Sbjct: 120 DINVEKLEAVYKAAPDRQD---LSSDINENLIVELYSK 154


>gi|80974150|gb|ABB53768.1| small ribosomal subunit protein 4 [Garovaglia elegans]
          Length = 191

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K P         ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGTLPGLTNKIPQLKSGS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI 
Sbjct: 57  NYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I VK +      + +     ++  +P +++           +I   L    
Sbjct: 117 SYRCKPQDFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|20531122|gb|AAM27381.1| ribosomal protein 4 [Rosulabryum billarderi]
          Length = 187

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGLTSKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A + +G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKVKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A + +   L ++   P +++ N         +I   L      + 
Sbjct: 117 KPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|37992601|gb|AAR06479.1| small ribosomal protein 4 [Meteorium illecebrum]
          Length = 187

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|255017199|ref|ZP_05289325.1| 30S ribosomal protein S4 [Listeria monocytogenes FSL F2-515]
          Length = 152

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 5/157 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +Q   KQK++  YG ++E++F++ F +A + +G    N +  LE RLD IVYR     T 
Sbjct: 1   MQQAEKQKLRHMYG-LTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLGLARTR 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
            AARQ VNH H+ V+G+ V+I SY+   G VI V +KS + +++ E+ +++   VPEY++
Sbjct: 60  RAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVCEKSAKNSAIAESLEVSSF-VPEYVT 118

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + + +  +  R+P   +       +    +VEFYSR
Sbjct: 119 FDAEKLTGSLNRLPERSE---LAAEINEAFIVEFYSR 152


>gi|37992543|gb|AAR06450.1| small ribosomal protein 4 [Hildebrandtiella cuspidans]
          Length = 188

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY+
Sbjct: 57  RIARKTKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNCIVDIPSYQ 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|33411994|emb|CAD86769.1| ribosomal protein small subunit 4 [Bryoxiphium norvegicum subsp.
           japonicum]
          Length = 180

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  A +++    +++  VP +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQKSQAMIIKNIDFSQKYKVPNHLTFNSLEKKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|37992429|gb|AAR06393.1| small ribosomal protein 4 [Barbellopsis trichophora]
          Length = 187

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|42794722|gb|AAS45756.1| Rps4 [Thibaudia macrocalyx]
          Length = 211

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 17/215 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K             QK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKXXXXXXXXXXXXQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E+      + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RXHYG-LTERXLLKYVRIAXKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVN 171
           RHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKPKHKRVPYHLTLN 175

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I ++       + ++  LVVE+YSR
Sbjct: 176 RGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|289599889|gb|ADD12895.1| ribosomal protein S4 [Doliocarpus multiflorus]
 gi|289599891|gb|ADD12896.1| ribosomal protein S4 [Doliocarpus subandinus]
          Length = 182

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P         L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 56  AKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I VK + K  A +          ++P++++++         +I  S       + +   
Sbjct: 116 IITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|37992519|gb|AAR06438.1| small ribosomal protein 4 [Floribundaria floribunda]
          Length = 187

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|3098232|gb|AAC15564.1| small ribosomal protein 4 [Thuidium tamariscinum]
          Length = 188

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+          ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTSQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNRRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|194738560|gb|ACF93837.1| small ribosomal protein 4 [Leptoscyphus porphyrius]
          Length = 177

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L  +  +P +++ +   +  +  +I +        + +   LVVE+YSR
Sbjct: 130 LFPKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175


>gi|37992493|gb|AAR06425.1| small ribosomal protein 4 [Dimorphocladon borneense]
          Length = 194

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S     +      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGTLPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +          I   L 
Sbjct: 117 DIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKSKIPNHLNYSFLEKKGLVNEI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|99640372|emb|CAJ45118.1| putative ribosomal protein S4 gene [Pilularia globulifera]
 gi|108861126|gb|ABG21435.1| ribosomal protein small subunit 4 [Pilularia globulifera]
 gi|166836612|gb|ABY90538.1| ribosomal protein small subunit 4 [Pilularia globulifera]
          Length = 200

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K+    ++       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKIIRRLKSLPGLTGKASKQKKTRVAAE--QSTSKKISQFCVRLEAKQRLRFNYG-VTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD +V+     PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P ++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198


>gi|134274697|emb|CAL30290.1| small ribosomal protein 4 [Marchesinia brachiata]
          Length = 184

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K           +       K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGSLPGLTGKISKTK------IDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQL 53

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD  ++      TI +ARQ VNHRH+ +N   VNI
Sbjct: 54  LKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMATTIPSARQLVNHRHIFINDYIVNI 113

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK GD+I +K K K  + + +   L+++   P +++ +   +     +        
Sbjct: 114 PSYNCKPGDIITIKNKEKSQSIISKNINLSQKLQTPNHLTFDSTQLRGLVNQTIRR---E 170

Query: 190 PYPVIMQPNLVVEF 203
                +   LVVE+
Sbjct: 171 WIDFKINELLVVEY 184


>gi|12330524|gb|AAG52799.1| ribosomal protein 4 [Barbula unguiculata]
          Length = 189

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINDRQKSQVMITKNVDFFQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|293634117|gb|ADE60438.1| ribosomal protein subunit 4 [Polytrichum commune]
          Length = 184

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  
Sbjct: 57  RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +  A +      +++  +P +++ N         +I   L      + +  
Sbjct: 117 DFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|37992699|gb|AAR06528.1| small ribosomal protein 4 [Tetraphidopsis pusilla]
          Length = 190

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 10/198 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGILPGLTNKILQVKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 57  QLLNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           NI SYRCK  D I V+ K K  A         +  +P +++ +         +I   L  
Sbjct: 117 NIPSYRCKPQDFIIVENKQKSEA---ATDFSKKYKIPNHLTYSFLEKKGLVNKI---LDR 170

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 171 ESIGLKINELLVVEYYSR 188


>gi|157689562|gb|ABV65337.1| ribosomal protein S4 [Strasburgeria robusta]
          Length = 185

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----KAGSDLRNQSRSLKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK
Sbjct: 56  ARKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D+I  + + K  A +      +   ++ +++++          +I  S       + +
Sbjct: 116 ARDIITARDEQKSRALIQNYLDSSFHEELTKHLTLYPSQYKGLVNQIIDSK---WVGLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|29422401|gb|AAO84596.1| small ribosomal protein 4 [Bartramia ithyphylla]
          Length = 189

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+        K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLEALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMASTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K  A + +     ++ ++P +++ N         +I 
Sbjct: 117 DRIVDIPSYRCKPHDFITIKDRPKSQAIISKNIDFYQKYEIPNHLTYNSSENKGLVNQI- 175

Query: 184 SSLKDVPYPVIMQPNL 199
             L      + +   L
Sbjct: 176 --LDRELIGLKINELL 189


>gi|262192908|gb|ACY30471.1| small ribosomal subunit protein 4 [Rhodobryum ontariense]
          Length = 188

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGPTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYI 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           C+  D I +K + K  A + +   L ++   P +++ N         +I   L      +
Sbjct: 117 CRPEDFITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|194738544|gb|ACF93829.1| small ribosomal protein 4 [Leptoscyphus porphyrius]
          Length = 177

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  +I +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDQIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175


>gi|63101101|gb|AAY33175.1| small ribosomal protein 4 [Pseudotrismegistia perundulata]
          Length = 188

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLESSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+   E R D I++R    PTI  ARQ VNHRH+L+N   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILINDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|118577567|gb|ABL07149.1| small ribosomal protein 4 [Piper darienense]
          Length = 178

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 1   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 60  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKTRDIITTRNEQ 119

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---WVGLKINELLVVEYYSR 176


>gi|77019159|emb|CAH60185.1| chloroplast 30S ribosomal protein S4 [Dryptodon decipiens]
          Length = 184

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  + +++    +++  +P +++ N         +I   L      + +  
Sbjct: 117 DFITIKDRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|118577559|gb|ABL07145.1| small ribosomal protein 4 [Piper amalago]
          Length = 180

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 3   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 61

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 62  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 121

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 122 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 178


>gi|42556496|gb|AAS19843.1| small ribosomal protein 4 [Radula okamurana]
          Length = 191

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K+    +     +       K S + ++L  KQK++ +YG ++EK+  
Sbjct: 1   IRRLGYLPGLSNKTL---KPKSISIDRSMSNKKISQYRIRLEEKQKLRFHYG-LTEKQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H ++N  +VNI 
Sbjct: 57  KYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+I ++ + K  + +     L ++ ++P +++ +   +  +  +    +    
Sbjct: 117 SYNCELGDIITIRNRQKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDCNS 173

Query: 191 YPVIMQPNLVVEFYSR 206
               +   LVVE+YSR
Sbjct: 174 INFKINELLVVEYYSR 189


>gi|17025869|gb|AAL32099.1| ribosomal protein 4 [Mitthyridium sp. Orban 1995]
          Length = 190

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    +    ++      K S + ++L  KQK++ +YG ++E++  +  
Sbjct: 3   LGTLSGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYV 58

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SY+
Sbjct: 59  RIARKVKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNSIVNIPSYQ 118

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    +++ ++ + +   P +++ N         +I   L      +
Sbjct: 119 CKPQDFITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 KINELLVVEYYSR 188


>gi|118577597|gb|ABL07164.1| small ribosomal protein 4 [Piper marginatum]
          Length = 183

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K P +  S    L  Q R  K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   PGLTSKRPRSESS----LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  
Sbjct: 56  KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I  + + +    V  +   A   ++P++++++         +I  S       + +  
Sbjct: 116 DIITTRNEQRSKVLVQNSMDSAYPEELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|121761831|gb|ABM65001.1| ribosomal protein S4 [Plagiomnium affine]
          Length = 186

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   ALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK
Sbjct: 57  ARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +     ++  +P +++ N  N      +I          + +
Sbjct: 117 PQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD---SIDLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|293612008|gb|ADE48448.1| ribosomal protein 4 [Lepidozamia peroffskyana]
          Length = 183

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       +R+        RR    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSRNDPTNQSSSRR---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 57  AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + K  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITVRDQQKLRAMIEKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|157689404|gb|ABV65258.1| ribosomal protein S4 [Picramnia polyantha]
          Length = 168

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD
Sbjct: 1   NQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLD 59

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
            I++R     TI  ARQ VNH+H+ VN R V+I SYRCK  D+I  + + K +  +    
Sbjct: 60  NILFRLGMASTIPQARQLVNHKHIFVNSRIVDIPSYRCKPQDIITARDEQKSINLIQNYL 119

Query: 158 QLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   ++P +++++         +I  S       + +   LVVE+YSR
Sbjct: 120 DSSPHEELPNHLTLHPIQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 166


>gi|15145870|gb|AAK83553.1| rps4 [Tayloria gunnii]
          Length = 189

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G  L G        +S         +K   S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGA-LPGLTNKISQLKSSPINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKAKGSTGEVLLQLLEMRLDNVIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P ++  N+        +I   L      
Sbjct: 117 RCKPQDFITIKDQQKSQAIINKNIEFHQKYKIPTHLIYNYLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|20531073|gb|AAM27358.1| ribosomal protein 4 [Theriotia lorifolia]
          Length = 184

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S            K S   ++L  KQK++ +YG I+E++     + 
Sbjct: 1   ALPGLTSKTPQLKSSSI-----NASNKKISQXRIRLEEKQKLRFHYG-ITERQLLKYVRI 54

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SY CK
Sbjct: 55  ARKAKGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNERIVNIPSYHCK 114

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K  + +++    +++  +P +++ +         ++   L      + +
Sbjct: 115 PQDFITIKDRQKSQSIIVKNMDFSQKYKIPNHLTFDSLEKKGLVNQV---LDRESIGLKI 171

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 172 NELLVVEYYSR 182


>gi|289599955|gb|ADD12928.1| ribosomal protein S4 [Tetracera oblongata]
          Length = 182

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P         L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 56  AKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I VK + K  A +      +   ++P++++++         +I  S       + +   
Sbjct: 116 IIIVKDEHKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|42718062|gb|AAS38453.1| rps4 [Splachnum vasculosum]
          Length = 189

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I          
Sbjct: 117 RCKPQDFITIKDRQKSXVIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576543|gb|AAF63884.1| ribosomal protein system 4 [Trachyloma diversinerve]
          Length = 188

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P ++  +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQI---LDRESID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|254935413|gb|ACT88094.1| ribosomal protein S4 [Pseudopanax linearis]
 gi|254935443|gb|ACT88109.1| ribosomal protein S4 [Pseudopanax linearis]
          Length = 181

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +      +  D +P++++++         +I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179


>gi|32401795|gb|AAP80886.1| small ribosomal protein 4 [Nymphaea tetragona]
          Length = 181

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P         L  Q R  K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LTSKKP----RSASDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
            G T   L+  LE RLD I++R     TI  ARQ VNH H+LVNGR V+I SYRCK  D+
Sbjct: 56  NGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSYRCKPRDI 115

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I  K K    A +      +   ++P++++++         +I  S       + +   L
Sbjct: 116 ITTKDKQGSRALIQNHMDSSSNAELPKHLTLHSLQYKGVVNQIIDSK---WVGLKVNELL 172

Query: 200 VVEFYSR 206
           +VE+YSR
Sbjct: 173 IVEYYSR 179


>gi|77019187|emb|CAH60199.1| chloroplast 30S ribosomal protein S4 [Grimmia montana]
          Length = 184

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ N         +I   L      + +  
Sbjct: 117 DFITIKDRQKSQAIIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|7576607|gb|AAF63916.1| ribosomal protein system 4 [Pylaisiadelpha tenuirostris]
          Length = 190

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 3   RLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE R D +++R     TI  ARQ VNHRH+LVN   V+I SY
Sbjct: 59  VRIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I          
Sbjct: 119 RCKPQDFITIKNQRKSETMISKNIEFYQKSKIPNHLTYSSLEKKGLVNQIVDR---ELIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|170516247|gb|ACB15125.1| small ribosomal protein 4 [Encephalartos gratus]
          Length = 187

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G       +R+        R+    S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 4   LPGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAG 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 60  RAKGSTGQVLLQLLEMRSDNTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPR 119

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  A + +   L+++D +P +++++         +I  S       + +  
Sbjct: 120 DVITVRDQQKSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|307828409|gb|ADN95002.1| small ribosomal protein 4 [Fossombronia cultriformis]
          Length = 187

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV   +VNI SY CK G
Sbjct: 60  KAKGSTGQTLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVGDDTVNIPSYSCKPG 119

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + +  + + +   L ++   P +++++   +  +  +           + +  
Sbjct: 120 DVITVRNRQESQSIIAKNMSLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|157689442|gb|ABV65277.1| ribosomal protein S4 [Celtis occidentalis]
          Length = 182

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 10/188 (5%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P      G  L  Q R +K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LTSKKP----RAGSDLRNQLRPNKKSQYRIRLEEKQKLRFHYG-LTEEQLLKYVRIAGKA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+ VNGR V+I SYRCK  D+
Sbjct: 56  KGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHIFVNGRMVDIPSYRCKPRDI 115

Query: 141 IEVKQKSKQLASVLEA--SQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           I V+ + K+  S+++      A  ++P++++++      +  +I  S       + +   
Sbjct: 116 ITVRDEQKKSKSMVQNYLDSSAREELPKHLTLDPFQSKGSVNQIIDSK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|29027240|gb|AAN47182.1| small ribosomal protein 4 [Hymenodontopsis bifaria]
          Length = 194

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+        K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLXALPGLTNKTPQLKSSS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K  A + +     ++  +P +++ +         +I   L 
Sbjct: 117 DIPSYRCKPQDFITMKDRQKYQAIISKNIDFYQKYKIPNHLTYSSLEKKGLVTQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|37683568|gb|AAQ98835.1| small ribosomal protein 4 [Pogonatum piliferum]
          Length = 190

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR         K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRFRNLPGLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNH+H+LVNG  VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMALTIPEARQLVNHKHILVNGHIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +K + +    + +    +++  +P Y++ N  +      ++   L     
Sbjct: 117 YRCKPQDFITIKDRQESQILIEKNIDFSQKYKIPNYLTFNFLDKKGLINQL---LNRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|194738522|gb|ACF93818.1| small ribosomal protein 4 [Leptoscyphus cuneifolius]
 gi|194738524|gb|ACF93819.1| small ribosomal protein 4 [Leptoscyphus cuneifolius]
 gi|194738526|gb|ACF93820.1| small ribosomal protein 4 [Leptoscyphus cuneifolius]
 gi|194738554|gb|ACF93834.1| small ribosomal protein 4 [Leptoscyphus cuneifolius]
 gi|194738556|gb|ACF93835.1| small ribosomal protein 4 [Leptoscyphus cuneifolius]
 gi|194738562|gb|ACF93838.1| small ribosomal protein 4 [Leptoscyphus cuneifolius]
          Length = 177

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  ++ +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQMINR---EWINLKINELLVVEYYSR 175


>gi|11228625|gb|AAG33098.1| small ribosomal protein 4 [Cynodontium jenneri]
          Length = 166

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I
Sbjct: 1   TSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNI 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K  A +++    
Sbjct: 60  IFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQDFITIKNRQKSQAIIIKNVDF 119

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 120 SQKAKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 164


>gi|146261547|gb|ABQ15083.1| ribosomal protein S4 [Altingia excelsa]
          Length = 177

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88
               G  L  Q R  K S + ++L  K K++ +YG ++E++     + A +++G T   L
Sbjct: 1   RPRAGSDLRHQSRSGKRSQYRIRLEEKXKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVL 59

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           +  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + K
Sbjct: 60  LQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQK 119

Query: 149 QLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A V      + R ++P +++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SRALVQNYLDSSPREELPNHLTLHLFQYKGLVNQIIDSK---WVSLKINELLVVEYYSR 175


>gi|37992579|gb|AAR06468.1| small ribosomal protein 4 [Lepyrodontopsis trichophylla]
          Length = 187

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQQKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LNRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|32401775|gb|AAP80876.1| small ribosomal protein 4 [Keteleeria davidiana]
          Length = 189

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K P     Y      +    K S + ++L  KQK++ +YG ++E++    
Sbjct: 2   RLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I SY
Sbjct: 57  VRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK  DVI ++ + +  A + +   L +RD +P +++ N         +I  S       
Sbjct: 117 PCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFNSLQYKGFINQIIDSK---WIS 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|18920751|gb|AAL82420.1| ribosomal protein system 4 [Isopterygium minutirameum]
          Length = 193

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 10  PGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 65

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R     TI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 66  KAKGSTGEVLLQLPEMRLDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 125

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I +K + K    + +  +  ++  +P +++ N         +I          + +  
Sbjct: 126 DLITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQIIDR---ESIGLKINE 182

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 183 LLVVEYYSR 191


>gi|63191667|gb|AAY34795.1| small ribosomal protein subunit 4 [Noguchiodendron sphaerocarpum]
          Length = 190

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       ++P    S    ++      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPGLAIETPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE R D +++R     TI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAHTIPGARQLVNHRHILVNDCIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I +K + K    + +  +  ++  +P +++ +         +I   L     
Sbjct: 117 YRCKPQDLITIKDQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 GLKINELLVVEYYSR 188


>gi|293611962|gb|ADE48425.1| ribosomal protein 4 [Ceratozamia kuesteriana]
 gi|293611964|gb|ADE48426.1| ribosomal protein 4 [Ceratozamia microstrobila]
          Length = 183

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       +R+        R+    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRC   D
Sbjct: 57  AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCNPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + +  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVHQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|118577583|gb|ABL07157.1| small ribosomal protein 4 [Piper hispidum]
          Length = 169

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 5/171 (2%)

Query: 37  HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96
             Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RL
Sbjct: 1   RSQPRSWKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAGKAKGSTGRVLLQLLEMRL 59

Query: 97  DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156
           D I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + +    V  +
Sbjct: 60  DNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQNS 119

Query: 157 SQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 MDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 167


>gi|172072915|ref|YP_001806676.1| ribosomal protein S4 [Cryptomeria japonica]
 gi|171854934|dbj|BAG16674.1| ribosomal protein S4 [Cryptomeria japonica]
 gi|239794302|dbj|BAH73299.1| ribosomal protein S4 [Cryptomeria japonica]
 gi|239794385|dbj|BAH73381.1| ribosomal protein S4 [Cryptomeria japonica]
          Length = 207

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 11/211 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI  R+        K+P   R+  P      +  KPS + ++L+ KQ+++ 
Sbjct: 1   MSRYRGPRLKIINRLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--M 175
           +LVN R V+I SYRCK  D I +K K +    +     + ++D   VP +++        
Sbjct: 118 ILVNDRIVDIPSYRCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQY 177

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +I  + +     + +   LVVE+YSR
Sbjct: 178 SGLVKKIIDNNR---IGLKINELLVVEYYSR 205


>gi|118577565|gb|ABL07148.1| small ribosomal protein 4 [Piper cordulatum]
          Length = 176

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 7   LRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAGKAKGSTGQVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + +    V  
Sbjct: 66  LDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQN 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 126 SMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 174


>gi|58293883|gb|AAW69888.1| small ribosomal protein 4 [Zygodon bartramioides]
          Length = 189

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKIPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLNMAPTIPGARQLVNHRHILVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D+I +K + K    + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDLITIKNRQKSQDIITKNIEFYQKYKIPNHLTYNSLEKKGFVNQI---LDREFIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|24473802|gb|AAL82744.1| small ribosomal subunit protein 4 [Leptostomum inclinans]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 58  KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +     ++   P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQKSQAIISKNIDFYQKYKTPNHLTYNSLKKKGLVNQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|194738550|gb|ACF93832.1| small ribosomal protein 4 [Leptoscyphus sp. 1 ND-2008]
          Length = 177

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 13/187 (6%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            +PKS    RS            K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LKPKSNYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKT 51

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD+
Sbjct: 52  KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDI 111

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           + ++ + K  + + +   L ++  +P +++ +   +  +  +I +        + +   L
Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLTFDPIKLRGSITQIINR---EWINLKINELL 168

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 169 VVEYYSR 175


>gi|162415086|gb|ABX89117.1| ribosomal protein S4 [Pottia intermedia]
          Length = 189

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I + ++ K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINERKKSQIMITKNVDFCQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|94962381|gb|ABF48497.1| small ribosomal protein subunit 4 [Paranapiacabaea paulista]
          Length = 193

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 5   RLGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 60

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 61  VRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYMVDIPSY 120

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ N         +I   L      
Sbjct: 121 RCKPQDFITIKNQHKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESID 177

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 178 LKINELLVVEYYSR 191


>gi|63101079|gb|AAY33164.1| small ribosomal protein 4 [Rhizofabronia persoonii]
          Length = 188

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLINHRHILVNDFIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K K      + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNKRNSQTIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LNRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|63191813|gb|AAY34866.1| small ribosomal protein subunit 4 [Microbryum davallianum]
          Length = 191

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 3   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI  Y
Sbjct: 59  VRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPXY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    + +    +++  +P +++ N         +I   L      
Sbjct: 119 RCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|7576631|gb|AAF63928.1| ribosomal protein system 4 [Climacium americanum]
          Length = 186

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++     +K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLRSSS---INQSTSNTKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|52783271|sp|Q6H9K8|RR4_EQUPA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927207|emb|CAE47539.1| small ribosomal protein 4 [Equisetum palustre]
          Length = 207

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I  R   NL G     + ++        Q  + K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRII-RRLRNLPGLTNKLIESKKNQASGSDQSNQKKVSQYCIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V+I S+ CK  D+I +       + + +  +  A+  +P+++++         
Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|184127939|gb|ACC67869.1| ribosomal protein small subunit 4 [Marattia kaulfussii]
          Length = 194

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K+  + ++       Q    K S + ++L AKQ+++  YG ++E++   
Sbjct: 1   RRLKDLPGLTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I S
Sbjct: 58  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKD 188
           YRCK  D+I V+ +      + +  +   +D +PE+++++    +       RI +    
Sbjct: 118 YRCKPKDIISVRDQPNSQILMKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD-- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 -SIGLNINELLVVEYYSR 192


>gi|166836604|gb|ABY90534.1| ribosomal protein small subunit 4 [Pilularia americana]
 gi|166836610|gb|ABY90537.1| ribosomal protein small subunit 4 [Pilularia americana]
          Length = 200

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K+    ++       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKIIRRLKSLPGLTGKASKQKKTRV--AADQPTSKKISQFCVRLEAKQRLRFNYG-VTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD +V+     PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P ++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198


>gi|37992403|gb|AAR06380.1| small ribosomal protein 4 [Achrophyllum dentatum]
          Length = 194

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       + P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGVLPGLTNRIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + + +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH+LVN   V
Sbjct: 57  QLLNYVRISRKAKGSTGDILLQLLEMRLDNIIFRLGMSPTIPGARQLINHRHILVNDCMV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +  +++ +         +I   L 
Sbjct: 117 DIPSYRCKPRDFITIKNQRKSEDIINKNIEFYQKFKISNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|307828392|gb|ADN94994.1| small ribosomal protein 4 [Fossombronia altilamellosa]
          Length = 186

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 2   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 59  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + +  +  L ++   P +++++   +  +  +           + +  
Sbjct: 119 DVITVRNRHKSQSIIARSMGLFQKPKTPNHLTLDSTRLRGSINQTIDRD---WINLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|254935419|gb|ACT88097.1| ribosomal protein S4 [Pseudopanax colensoi var. colensoi]
          Length = 181

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 5/179 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
                +  +   +  D +P++++++         +I  S       + +   LVVE+YS
Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYS 178


>gi|37992679|gb|AAR06518.1| small ribosomal protein 4 [Squamidium brasiliense]
          Length = 188

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D + +K + K    + +  +  ++  +P +++           +I   L      +
Sbjct: 117 CKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|62287264|sp|Q6H9K4|RR4_EQUSY RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927215|emb|CAE47543.1| small ribosomal protein 4 [Equisetum sylvaticum]
          Length = 207

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I  R   NL G     V ++        Q  + K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQASGSDQSNQKKVSQYCIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V+I S+ CK  D+I +       + + +  +  A+  +P+++++         
Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|12330526|gb|AAG52800.1| ribosomal protein 4 [Mitthyridium constrictum]
          Length = 189

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG ++E++  + 
Sbjct: 1   RLGTLSGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           +CK  D I  K + K    +++ ++ + +   P +++ N         +I   L      
Sbjct: 117 QCKSQDFITXKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---LNQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|194738518|gb|ACF93816.1| small ribosomal protein 4 [Leptoscyphus cleefii]
          Length = 177

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  ++ +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVNQMINR---EWINLKINELLVVEYYSR 175


>gi|125662724|gb|ABN50312.1| small ribosomal protein 4 [Ephedra trifurca]
          Length = 203

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62
               + K+ RR+        K P   +     +H   R   K S + + L+ KQK++ +Y
Sbjct: 1   YRGPRFKLIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 56

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L
Sbjct: 57  G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177
           VN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N      
Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  +       + ++  LV+E+YSR
Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201


>gi|17025810|gb|AAL32072.1| ribosomal protein 4 [Syrrhopodon perarmatus]
          Length = 194

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K+P    S     +      K S + ++L  KQK++ +YG ++E+
Sbjct: 1   VKILRRLGTLSGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-LTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V
Sbjct: 57  QLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRLGLTPTIPGARQLVNHRHILVNNRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLK 187
           NI SY+CK  D I +K + K    +++ +    +   P ++  N         +I   L 
Sbjct: 117 NIPSYQCKPQDFITIKDQQKYQTRIIKNTNFFPKHKTPNHLIFNSREKRGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 QESIGLKINELLVVEYYSR 192


>gi|146261573|gb|ABQ15096.1| ribosomal protein S4 [Liquidambar styraciflua]
          Length = 167

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + K  A V     
Sbjct: 60  ILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDEQKSRALVQNYLA 119

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R ++P +++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SSPREELPNHLTLHLFQYKGLVNQIIDSK---WVSLKINELLVVEYYSR 165


>gi|14090476|gb|AAK53523.1| small ribosomal protein 4 [Holomitrium vaginatum]
          Length = 182

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 72  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDSITIKDRQKSQAMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 132 NIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|42794712|gb|AAS45751.1| Rps4 [Thibaudia densiflora]
          Length = 211

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 15/214 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P      G     Q R  K       +R ++K K 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFXKKKKSXXHIRPQEKQKL 56

Query: 61  YYGD-ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +   ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHR
Sbjct: 57  GFXXGLTERQLLKSXRXAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHR 116

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNH 172
           HVLVNGR ++I SYRCK  D+I  ++KSK     S      L  R      VP ++++N 
Sbjct: 117 HVLVNGRIIDIPSYRCKPRDIITAREKSKALIQNSFQNLFDLPSRKRKRKRVPYHLTLNR 176

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +I ++       + ++  LVVE+YSR
Sbjct: 177 GQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|284468539|gb|ADB90330.1| ribosomal protein subunit 4 [Scleropodium cespitans]
          Length = 187

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|146261587|gb|ABQ15103.1| ribosomal protein S4 [Micranthes integrifolia]
          Length = 173

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 5/175 (2%)

Query: 33  GPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFL 92
           G  L  Q R  K S + ++L  KQK++ +YG I+E++     + A +++G T   L+  L
Sbjct: 1   GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAGKAKGSTGQVLLQLL 59

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK  D+I  K + K    
Sbjct: 60  EMRLDNILFRLGMASTIPGARQLVNHRHILVNGGIVDIPSYRCKPRDIITAKDEQKSRTL 119

Query: 153 VLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +   +   ++P+Y++++         +I  +       + +   LVVE+YSR
Sbjct: 120 IQNSLDSSPHEELPKYLTLHPLQQKGLVNQIIDNK---WVGLKINELLVVEYYSR 171


>gi|14090478|gb|AAK53524.1| small ribosomal protein 4 [Amphidium californicum]
          Length = 182

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 72  LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NVDFSQKSKVPNHLTFNSLEKKGLVNKI---LDQESIGLKINELLVVEYYSR 180


>gi|254935395|gb|ACT88085.1| ribosomal protein S4 [Raukaua simplex]
          Length = 181

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +Y  ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHY-XLTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  +   +  D +P++++++         +I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179


>gi|37992651|gb|AAR06504.1| small ribosomal protein 4 [Pilotrichidium callicostatum]
          Length = 188

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S    +       K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGILPGLTNKIPELKSSS---ITQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH++VN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHIVVNDYIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSEAIINKNIEFYQKMKIPNHLTYNFLEKKGLINQI---LDXESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|42405290|gb|AAS13471.1| rps4 small ribosomal protein [Achrophyllum quadrifarium]
          Length = 194

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       + P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VRIIRRLGVLPGLTNRIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + + +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH+LVN   V
Sbjct: 57  QLLNYVRISRKAKGSTGDILLQLLEMRLDNIIFRLGMSPTIPGARQLINHRHILVNDCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +  +++ +         +I   L 
Sbjct: 117 DIPSYRCKPRDFITIKNRRKSEDIINKNIEFYQKSKISNHLTYSFLEKKGLVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|307828411|gb|ADN95003.1| small ribosomal protein 4 [Austrofossombronia australis]
          Length = 186

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A 
Sbjct: 2   LPGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK G
Sbjct: 59  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPG 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  + + ++  L ++   P +++++   +  +  +           + +  
Sbjct: 119 DVITVRNRQKSQSIIAKSIILFQKPKAPNHLTLDSTRLRGSINQTIDRD---WINLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|121761808|gb|ABM64990.1| ribosomal protein S4 [Plagiomnium acutum]
          Length = 185

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 58  KAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I +K + K    + +     ++  +P +++ N  N      +I          + +  
Sbjct: 118 DLITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLNKKGLVNQILDRD---SIDLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|11275973|gb|AAG33845.1| small ribosomal protein 4 [Leucoloma sp. La Farge 5555]
          Length = 188

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       + P    +    ++      K S + ++L  KQK++ +YG ++E++  +  
Sbjct: 1   LGTLPGLTTQIPELKSNS---INHSTSNKKISQYRVRLEEKQKLRFHYG-LTERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVISRLGIAPTIPGARQLVNHRHILVNNCIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           C   D I +K +       L+ +  +++  VP +++ N         +I          +
Sbjct: 117 CXPXDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGXVNQIIDQ---ESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992687|gb|AAR06522.1| small ribosomal protein 4 [Squamidium macrocarpum]
          Length = 189

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTISGARQLVNHRHILVNECIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D + +K + K    + +  +  ++  +P +++           +I   L      
Sbjct: 117 RCKPQDFVTIKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|77019153|emb|CAH60182.1| chloroplast 30S ribosomal protein S4 [Grimmia caespiticia]
          Length = 188

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 5   PGLTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 60

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 61  KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQ 120

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ N         +I   L      + +  
Sbjct: 121 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 177

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 178 LLVVEYYSR 186


>gi|18920761|gb|AAL82425.1| ribosomal protein system 4 [Orthothecium intricatum]
          Length = 188

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
                    K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   FRTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K  A + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQKKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|154505142|ref|ZP_02041880.1| hypothetical protein RUMGNA_02655 [Ruminococcus gnavus ATCC 29149]
 gi|153794621|gb|EDN77041.1| hypothetical protein RUMGNA_02655 [Ruminococcus gnavus ATCC 29149]
          Length = 181

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           +R   K S +GLQLR KQK K  YG + EK FR+ + +A +  G T  NL+  LESRLD 
Sbjct: 17  KRANRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKAKQMEGMTGENLMILLESRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R  F  T   ARQ V+H+HVLVNG+ VNI SY  K GDVIE+K+K K      +  +
Sbjct: 76  VMFRMGFARTRKEARQIVDHKHVLVNGKQVNIPSYLVKAGDVIEIKEKHKDCQRYKDILE 135

Query: 159 LAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   + +P+++ V+ +N+  T   +PS        V +   L+VE YS+
Sbjct: 136 VTGGNMIPDWLEVDAENLKGTVKELPSR---EAIDVPVDEMLIVELYSK 181


>gi|32401781|gb|AAP80879.1| small ribosomal protein 4 [Abies fraseri]
          Length = 189

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           R +        K P     Y      +    K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RPLKTLPGLTSKRP----KYRNDSINRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I S
Sbjct: 56  YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  DVI ++ + +  A + +   L +RD+ P +++ N         +I  S      
Sbjct: 116 YPCKPQDVITIRDQQRLRAIIRKNIDLFQRDILPNHLTFNSLQYKGFINQIIDSK---WI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 SLKINELLVVEYYSR 187


>gi|32401806|gb|AAP80891.1| small ribosomal protein 4 [Pachysandra procumbens]
          Length = 187

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 11/195 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LV GR V I S
Sbjct: 56  YVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVXGRIVXIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I  K + K  A +      +   ++P++++++         +I  S      
Sbjct: 116 YRCKPRDIITAKDEQKSXALIQNYLDSSPHEELPKHLTLHS--FQGLVNQIIDSK---WV 170

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVV +YSR
Sbjct: 171 GLKINELLVVXYYSR 185


>gi|289599945|gb|ADD12923.1| ribosomal protein S4 [Pinzona coriacea]
          Length = 181

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P         L  Q R  K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LTSKRPKTR----SDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+
Sbjct: 56  KGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDI 115

Query: 141 IEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I VK + K  A +          ++P++++++         +I  S       + +   L
Sbjct: 116 ITVKDEHKSRALIQNYLDSFPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELL 172

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 173 VVEYYSR 179


>gi|33413199|emb|CAD86735.1| ribosomal protein small subunit 4 [Leucoloma sprengelianum]
          Length = 188

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       + P    +    ++      K S + ++L  KQK++ +YG ++E++  +  
Sbjct: 1   LGTLPGLTTQIPELKSNS---INHSTSNKKISQYRVRLEEKQKLRFHYG-LTERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD ++ R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RIARKAKGSTGQVLLQLLEMRLDNVISRLGIAPTIPGARQLVNHRHILVNNCIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K +       L+ +  +++  VP +++ N         +I          +
Sbjct: 117 CKPQDFITIKDRQNFQNMTLKNTGFSQKYKVPNHLTFNSLEKKGLVNQIIDQ---ESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|293611958|gb|ADE48423.1| ribosomal protein 4 [Bowenia spectabilis]
          Length = 182

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G       +R+        R+    S + ++L  KQK++ +YG ++E++     + A R+
Sbjct: 1   GLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLQYVRIAGRA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  DV
Sbjct: 57  KGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 116

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I V+ + +  A + +   L+++D +P +++++         +I  S       + +   L
Sbjct: 117 ITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|162415082|gb|ABX89115.1| ribosomal protein S4 [Hilpertia velenovskyi]
          Length = 189

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    + +    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINDRKKSQVMISKNVDFSQKYKIPNHLTFNSLEKKGLINQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|14090494|gb|AAK53532.1| small ribosomal protein 4 [Paraleucobryum enerve]
          Length = 183

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+    +S            K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTXPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D 
Sbjct: 58  KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I ++ + K  A +++    +++  +P +++ +         +I   L      + +   L
Sbjct: 118 ITIEDRQKSQAMIIKNIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELL 174

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 175 VVEYYSR 181


>gi|184128007|gb|ACC67903.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128017|gb|ACC67908.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128033|gb|ACC67916.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128053|gb|ACC67926.1| ribosomal protein small subunit 4 [Angiopteris boninensis]
 gi|184128057|gb|ACC67928.1| ribosomal protein small subunit 4 [Angiopteris durvilleana]
 gi|184128067|gb|ACC67933.1| ribosomal protein small subunit 4 [Angiopteris smithii]
 gi|184128071|gb|ACC67935.1| ribosomal protein small subunit 4 [Archangiopteris hokouensis]
          Length = 190

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +  Q    K S + ++L AKQ+++  +G ++E++     + A
Sbjct: 1   DLPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 59  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++     V +  +   +D +PE+++ +    +       RI +        +
Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 DINELLVVEYYSR 188


>gi|42718060|gb|AAS38452.1| rps4 [Splachnum melanocaulon]
          Length = 189

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I          
Sbjct: 117 RCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576641|gb|AAF63933.1| ribosomal protein system 4 [Crossomitrium rotundifolium]
          Length = 190

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K      S    ++      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRRLGVLPGLTNKISQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH++VN   V+I 
Sbjct: 57  NYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVVNDFLVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +K K K    + +  +  ++  +P +++ N         +I   L    
Sbjct: 117 SYRCKSQDFITIKNKKKSKTIISKNIEFYQKSKIPNHLTYNFLEKKGLVNQI---LDRES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|157689490|gb|ABV65301.1| ribosomal protein S4 [Hua gabonii]
          Length = 201

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 11/203 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P   +     L  + R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTCKWPRKKKDN---LRKRWRYRKKSQYRIRLEEKQKLRFHYG-LTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 57  QLLKYVRMAGKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-----DVPEYISVNHDNMVATFVRIP 183
           +I SYRCK  D+I  K + K  A + +  + +         P ++++          +I 
Sbjct: 117 DIPSYRCKPRDIITAKDEQKSRALIQKYLKSSRHRRTRPKFPNHLTLQGYQYKGVVNQII 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            S K V     +   LVVE+YSR
Sbjct: 177 DS-KWVGLQ-KINELLVVEYYSR 197


>gi|42718056|gb|AAS38450.1| rps4 [Splachnum weberbaueri]
          Length = 189

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G  L G        +S            K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGV-LPGLTNKTFQLKSSPINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I          
Sbjct: 117 RCKPEDSITIKDRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDRQ---LIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|293612040|gb|ADE48464.1| ribosomal protein 4 [Zamia vazquezii]
          Length = 183

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       + +        R+    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSINDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 57  AKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + +  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|77019185|emb|CAH60198.1| chloroplast 30S ribosomal protein S4 [Grimmia meridionalis]
          Length = 182

 Score =  152 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSL---INQATSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  + +++    +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQKSQSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|78102691|gb|ABB21559.1| small ribosomal protein 4 [Plagiochila massalongoana]
          Length = 189

 Score =  152 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 8/194 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQVLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I +  K K  A V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCKPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLV 200
                 + +   LV
Sbjct: 176 --EWINLQINELLV 187


>gi|293633979|gb|ADE60369.1| ribosomal protein subunit 4 [Dendroligotrichum microdendron]
          Length = 183

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   GLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D
Sbjct: 57  AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + +  A +      +++  +P +++ N         +I   L      + +   
Sbjct: 117 FITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|49182772|gb|AAT57848.1| small ribosomal protein [Odontoschisma denudatum]
          Length = 195

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RAKIIRRLGALPGLTGKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L    E RLD  + R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQSSKYVRIARKAKGSTGQVLPQLPEMRLDNTILRLGMAPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           ++I SY  + GD+I +K K K  + +     L ++  +P +++ +   +  +  ++ +  
Sbjct: 117 IDIPSYDREPGDIITIKDKQKSRSIITRNINLFQKSKIPSHLTFDLTQLQGSVNQMVNR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVNLKINELLVVEYYSR 193


>gi|33413179|emb|CAD86768.1| ribosomal protein small subunit 4 [Seligeria polaris]
          Length = 182

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
            D +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D   +K + K  A +++
Sbjct: 72  SDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSYRCKPQDFFTIKDRQKSQAMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NIDFSQKYKVPNHLTFNSLEKKGLVNQI---LDHESIGLKINELLVVEYYSR 180


>gi|22854707|gb|AAN09773.1| small ribosomal protein 4 [Eucamptodontopsis brittoniae]
          Length = 175

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 6   INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 64

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 65  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDSITIKDRQKSQAMIIK 124

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 125 NIDFSQKSKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 173


>gi|32401779|gb|AAP80878.1| small ribosomal protein 4 [Tsuga canadensis]
          Length = 188

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 12/197 (6%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+        K P +             + K S + ++   KQK++  YG ++E++ 
Sbjct: 1   IIRRLKTLPGLTSKRPKSRNDSI-------NRRKISQYRIRPEEKQKLRFNYG-LTERQL 52

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A  ++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I
Sbjct: 53  LKYVRIARXTKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDI 112

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK  DVI ++ + +  A + +   L +RD +P++++ N         +I  S    
Sbjct: 113 PSYPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK--- 169

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 170 WISLKINELLVVEYYSR 186


>gi|293634103|gb|ADE60431.1| ribosomal protein subunit 4 [Polytrichastrum sexangulare]
          Length = 185

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSGYINQTVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  
Sbjct: 58  RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +  A +      +++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRELIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|22854681|gb|AAN09760.1| small ribosomal protein 4 [Brothera leana]
          Length = 185

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  
Sbjct: 58  KAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    V +  +L+++  VP +++ N         +I   L      + +  
Sbjct: 118 DFITIKNRQKSQFIVAKNIELSQKYKVPNHLTFNSLEKKGLVNQI---LNKESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|22854699|gb|AAN09769.1| small ribosomal protein 4 [Dicranoloma blumii]
          Length = 191

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
                    K+P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 4   FRTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 59

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 60  RIARKAKGSTGQVLLQLLEMRSDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYR 119

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I VK + K  A +++    +++  VP +++ +         +I   L      +
Sbjct: 120 CKPQDFITVKNRQKSQAMIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESIGL 176

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 177 KINELLVVEYYSR 189


>gi|7576767|gb|AAF63980.1| small ribosomal protein 4 [Oligotrichum parallelum]
          Length = 182

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A R+
Sbjct: 1   LTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + +  A +      +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDQQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|38000439|gb|AAR06424.1| small ribosomal protein 4 [Diaphanodon procumbens]
          Length = 196

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 3   VRIIRRLGPLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITER 58

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V
Sbjct: 59  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMV 118

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D I +K + K    + +  +  ++  +P +++ +         +I   L 
Sbjct: 119 DIPSYRCKPQDFITIKNRRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVTQI---LD 175

Query: 188 DVPYPVIMQPNLVVE 202
                + +   LVVE
Sbjct: 176 RESIGLKINELLVVE 190


>gi|89112923|gb|ABD61080.1| ribosomal protein subunit 4 [Campylostelium pitardii]
 gi|89112925|gb|ABD61081.1| ribosomal protein subunit 4 [Campylostelium pitardii]
 gi|89112927|gb|ABD61082.1| ribosomal protein subunit 4 [Campylostelium pitardii]
          Length = 172

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMAPTIPGARQLVNHRHILVNNHIVNIPSYRCKPQDFITIKNRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ N         +I   L+     + +   LVVE+YSR
Sbjct: 122 NIDFSQKYKVPNHLTFNSLEKKGLVNQI---LQHESIGLKINELLVVEYYSR 170


>gi|291544483|emb|CBL17592.1| SSU ribosomal protein S4P [Ruminococcus sp. 18P13]
          Length = 198

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 10/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+  +    K  R +G +      S  + R+          + K S +G+QL+ KQK+K 
Sbjct: 1   MAVSKEPILKRCRHLGISPMVMGISKNSNRNP-----NANSRKKVSEYGMQLKEKQKLKF 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK F   F+ A++  G    NLI+ LESRLD + YR     T   ARQ V HRH
Sbjct: 56  IYGVL-EKPFYHYFEIAEKMEGKAGDNLITLLESRLDNVAYRMGMALTRREARQLVTHRH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNMVATF 179
             VNG+ VNI SYR KEGDVI + + S+      +  +  A R VP ++  N +N     
Sbjct: 115 FTVNGQRVNIPSYRVKEGDVIALYEGSRSSQKFKDVLEQTANRPVPLWLEANKENFSVKV 174

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R+P  ++D+ Y V  + +L+VE YS+
Sbjct: 175 TRMP-KVEDLDYEV--EAHLIVELYSK 198


>gi|297179939|gb|ADI23949.1| small ribosomal protein 4 [Ambuchanania leucobryoides]
          Length = 184

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P +   Y   ++      K S + ++L  KQK++ +YG I+E++     + A 
Sbjct: 1   PGLTNKTPQSKSIY---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD +++R    PTI  ARQ VNHRHVLVN  +VNI SYRCK  
Sbjct: 57  RAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHVLVNNHTVNIPSYRCKPR 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I ++ + K  A +  +    +    P +++++         +I          + +  
Sbjct: 117 DFIIIRDRQKSQAIITRSMDYFQSYKTPNHLTLDSSQKKGLINQIIDR---ESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|184128061|gb|ACC67930.1| ribosomal protein small subunit 4 [Angiopteris sp. China]
          Length = 190

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +  Q    K S + ++L AKQ+++  +G ++E++     + A
Sbjct: 1   DLPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 59  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++     V +  +   +D +PE+++++    +       RI +        +
Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 DINELLVVEYYSR 188


>gi|194738532|gb|ACF93823.1| small ribosomal protein 4 [Leptoscyphus infuscatus]
 gi|194738534|gb|ACF93824.1| small ribosomal protein 4 [Leptoscyphus infuscatus]
          Length = 177

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD + ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDTLTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +     ++ +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGFVNQMINR---EWINLKINELLVVEYYSR 175


>gi|37992661|gb|AAR06509.1| small ribosomal protein 4 [Pseudotrachypus martinicensis]
          Length = 187

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|89112921|gb|ABD61079.1| ribosomal protein subunit 4 [Campylostelium strictum]
          Length = 172

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K   K  A +++
Sbjct: 62  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFINIKDGQKSQAMIIK 121

Query: 156 ASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++D +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NVDFSQKDKIPNHLTFNSLEKKGLVNQI---LNHESVGLKINELLVVEYYSR 170


>gi|37992597|gb|AAR06477.1| small ribosomal protein 4 [Meteoriella soluta]
          Length = 189

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    +       K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLTNKTPQLKSSS---IXQSXSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNKI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|11228639|gb|AAG33105.1| small ribosomal protein 4 [Ditrichum flexicaule]
 gi|33413211|emb|CAD86740.1| ribosomal protein small subunit 4 [Ditrichum flexicaule]
 gi|77019137|emb|CAH60175.1| chloroplast 30S ribosomal protein S4 [Ditrichum flexicaule]
          Length = 181

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  + A +++
Sbjct: 1   TNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAK 56

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I
Sbjct: 57  GSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFI 116

Query: 142 EVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
            +  + K  A +++    +++  VP +++ N         +I   L      + +   LV
Sbjct: 117 TINDRQKSQAVIIKNIGFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIGLKINELLV 173

Query: 201 VEFYSR 206
           VE+YSR
Sbjct: 174 VEYYSR 179


>gi|194738498|gb|ACF93806.1| small ribosomal protein 4 [Leptoscyphus australis]
          Length = 177

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGEVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY CK GD++ ++ K K    + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINNDIVDIPSYNCKPGDILTIRNKQKSQFIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  ++ +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVNQMINR---EWINLKINELLVVEYYSR 175


>gi|227345137|gb|ACP28121.1| small ribosomal protein 4 [Clasmatocolea obvoluta]
          Length = 191

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G        +     SY   +       K S + ++L  KQK++ +YG +SE++    
Sbjct: 3   RVGAFPGLTSTTLKPISSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-MSERQLLKS 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE R D  ++R     TI  ARQFVNHRH+ +N   V+I SY
Sbjct: 59  MRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSSTIPGARQFVNHRHISINNDIVDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            C+ GD+I V+ K K  + + +   L ++  +P +++ +   +  +  ++          
Sbjct: 119 NCEPGDIITVRNKHKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMIDR---EWIN 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 176 LKINELLVVEYYSR 189


>gi|77019177|emb|CAH60194.1| chloroplast 30S ribosomal protein S4 [Grimmia khasiana]
          Length = 184

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTPQLKSSL---VNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNHIVNIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ N         +I   L      + +  
Sbjct: 117 DFITIKDRQKSQAMIIKNMNFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|62287265|sp|Q6H9K7|RR4_EQUPT RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927209|emb|CAE47540.1| small ribosomal protein 4 [Equisetum pratense]
          Length = 207

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I  R   NL G     V ++        Q  + K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQVSGSDQSNQKKVSQYCIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V+I S+ CK  D+I +       + + +  +  A+  +P+++++         
Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIESFAKDQIPDHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|194738552|gb|ACF93833.1| small ribosomal protein 4 [Leptoscyphus sp. 2 ND-2008]
          Length = 177

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKTKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   +NI SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDILNIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  +I +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQIINR---EWINLKINELLVVEYYSR 175


>gi|121761806|gb|ABM64989.1| ribosomal protein S4 [Plagiomnium arbuscula]
          Length = 185

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGPTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E+R D I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 58  KAKGSTGEVLLQLPETRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +     ++  +P++++ N  N      +I          + +  
Sbjct: 118 DFITIKDRQKSQTMISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD---SIDLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|37992539|gb|AAR06448.1| small ribosomal protein 4 [Hampeella pallens]
          Length = 194

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       K P    +    ++      K S + ++L  KQK++ +YG I+E+
Sbjct: 1   VKIIRRLGNLPGLTNKIPQLKSNS---INQSTSTKKISQYRIRLEEKQKLRFHYG-ITER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +  +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHR +LVN   V
Sbjct: 57  QLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIFRLNMAPTIPGARQLVNHRQILVNNCIV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLK 187
           NI SYRCK  D I VK        + +    +++D +P ++  +         +I   L 
Sbjct: 117 NIPSYRCKPQDFIIVKNLKNSEVKMNKNKDFSQKDKIPNHLIYSSLEKKGLVNKI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|32401777|gb|AAP80877.1| small ribosomal protein 4 [Tsuga caroliniana]
          Length = 188

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 12/197 (6%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+        K P +             + K S + ++   KQK++  YG ++E++ 
Sbjct: 1   LIRRLKTLPGLTSKRPKSRNDSI-------NRRKISQYRIRPEEKQKLRFNYG-LTERQL 52

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I
Sbjct: 53  LKYVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDI 112

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK  DVI ++ + +  + + +   L +RD +P++++ N         +I  S    
Sbjct: 113 PSYPCKPQDVITIRDQQRLRSIIRKNIDLFQRDKLPKHLTFNSLQYKGFINQIIDSK--- 169

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 170 WISLKINELLVVEYYSR 186


>gi|313183929|ref|YP_004021783.1| ribosomal protein S4 [Equisetum arvense]
 gi|52783273|sp|Q6H9L6|RR4_EQUAR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62287268|sp|Q6H9L3|RR4_EQUFL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927191|emb|CAE47531.1| small ribosomal protein 4 [Equisetum arvense]
 gi|48927197|emb|CAE47534.1| small ribosomal protein 4 [Equisetum fluviatile]
 gi|281371649|gb|ADA63582.1| ribosomal protein S4 [Equisetum arvense]
          Length = 207

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I  R   NL G     V ++      + Q  + K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNQASGNDQSNQKKVSQYCIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V+I S+ CK  D+I +       + + +  +  A+  +P+++++         
Sbjct: 119 ILVNNRIVDIPSFHCKPKDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEQKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GFVNYLINR---ESIGLKINELLVVEYYSR 205


>gi|14090492|gb|AAK53531.1| small ribosomal protein 4 [Leucobryum sanctum]
          Length = 186

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+    +S            K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTXSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 58  KGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  + V +  + +++  VP +++ +         +I   L      + +   L
Sbjct: 118 ISIKNRQKSQSIVAKNIEFSQKYKVPNHLTFDSLEKKGLVNQI---LNHESIGLKINELL 174

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 175 VVEYYSR 181


>gi|15145824|gb|AAK83530.1| rps4 [Splachnum rubrum]
          Length = 189

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I          
Sbjct: 117 RCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLIYNSLKNQGLVNQILDRQ---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|12330528|gb|AAG52801.1| ribosomal protein 4 [Fissidens bushii]
          Length = 189

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G        +P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGILQGLTNXTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE+R D I++R+   PTI  ARQ VNHRH+LVN   VNI SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLETRPDNIIFRSGMTPTIPGARQLVNHRHILVNDHIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    +++    +++ ++P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDQQKYQVMIIKNINFSQKYEIPNHLTFNSLEKKGLVKQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|284468551|gb|ADB90336.1| ribosomal protein subunit 4 [Homalothecium nuttallii]
          Length = 187

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|157689500|gb|ABV65306.1| ribosomal protein S4 [Irvingia malayana]
          Length = 182

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRP----RAGSDLRNQYRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAAK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK  D
Sbjct: 56  AKGSTGQVLLQLLEMRLDNILFRLGMSSTIPRARQLVNHRHILVNGCIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I  + + K  A +      + + ++P+++++          +I  S       + +   
Sbjct: 116 IITARDEQKSRAMIQNYLDSSPQEELPKHLTLYPFQYKGLVTQIIDSK---WVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|42718084|gb|AAS38464.1| rps4 [Tayloria mirabilis]
          Length = 189

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKAKGSTGEILLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P  +  N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFHQKYKIPNNLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|311223018|gb|ADP76591.1| small ribosomal protein 4 [Pellia neesiana]
          Length = 189

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K  +   S   G     +K   S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQILSQTLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDNTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY C+  DVI V  + K+   +       +  VP +++ +      +  +          
Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---ECI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 DLKINELLVVEYYSR 187


>gi|293633967|gb|ADE60363.1| ribosomal protein subunit 4 [Alophosia azorica]
          Length = 183

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P     Y   ++      K S + ++L  KQK++ +YG I+E++     + A  
Sbjct: 1   GLTNKTPQLKSGY---INQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAKG 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    P+I  ARQ VNH+H+LVN   VNI SYRCK  D
Sbjct: 57  AKGSTGQILLQLLEMRLDNIIFRLGMAPSIPGARQLVNHKHILVNDCIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A +L+    +++  +P +++ N         +I   L      + +   
Sbjct: 117 FITIKNRQKSQAIILKNMDFSQKYKIPNHLTFNSFEKKGLVNQI---LDRELIDLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|42718088|gb|AAS38466.1| rps4 [Tayloria purpurascens]
          Length = 188

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    +    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKIPQLKSNP---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RVARKTKGSTGEVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K +    A + +  +  ++  +P ++  N         +I   L      +
Sbjct: 117 CKPQDFITIKNRQNSQAIINKNIEFHQKYKIPTHLIYNSLKKQGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992605|gb|AAR06481.1| small ribosomal protein 4 [Neobarbella comes]
          Length = 184

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 57  KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ N         +I   L      + +  
Sbjct: 117 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYNSLEKKGLVNQI---LDRESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|14090496|gb|AAK53533.1| small ribosomal protein 4 [Paraleucobryum longifolium]
 gi|14090498|gb|AAK53534.1| small ribosomal protein 4 [Paraleucobryum longifolium]
          Length = 183

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 14  INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 72

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I ++ + K  A +++
Sbjct: 73  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIEDRQKSQAMIIK 132

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 133 NIDFSQKYKIPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 181


>gi|125662718|gb|ABN50309.1| small ribosomal protein 4 [Ephedra sp. Tibet-7]
          Length = 205

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 14/211 (6%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60
           S+    + KI RR+          P   +     +H   R   K S + + L+ KQK++ 
Sbjct: 1   SRDRGPRFKIIRRLKTLPGLTSTRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175
           +LVN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N    
Sbjct: 116 ILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQN 175

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +I  +       + ++  LV+E+YSR
Sbjct: 176 KGIVNKIIDTKD---LQLKIKEMLVIEYYSR 203


>gi|125662722|gb|ABN50311.1| small ribosomal protein 4 [Ephedra tweediana]
          Length = 203

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62
               + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +Y
Sbjct: 1   YRGPRFKIIRRLKPLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 56

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L
Sbjct: 57  G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177
           VN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N      
Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  +       + ++  LV+E+YSR
Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201


>gi|184128049|gb|ACC67924.1| ribosomal protein small subunit 4 [Angiopteris angustifolia]
          Length = 190

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +  Q    K S + ++L AKQ+++  +G ++E++     + A
Sbjct: 1   DLPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYIRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 59  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++     V +  +   +D +PE+++ +    +       RI +        +
Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 DINELLVVEYYSR 188


>gi|22854745|gb|AAN09792.1| small ribosomal protein 4 [Braunfelsia dicranoides]
          Length = 191

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 7   LPGLTNKTPQLKSGSINQSASNKK--VSQYRIRLEEKQKLRFHYG-ITERQLLNHVRIAR 63

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 64  KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNDRVVNIPSYRCKPR 123

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  VP +++ +         +I   L      + +  
Sbjct: 124 DFITIKDRQKSQAIIIKNIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 180

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 181 LLVVEYYSR 189


>gi|74273089|gb|ABA01244.1| ribosomal protein S4 [Passiflora podlechii]
 gi|74273121|gb|ABA01260.1| ribosomal protein S4 [Passiflora lobbii subsp. ayaucuchoensis]
          Length = 183

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGQTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|14090486|gb|AAK53528.1| small ribosomal protein 4 [Timmiella crassinervis]
          Length = 182

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L   QK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEENQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A + +
Sbjct: 72  LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFITIKDRQKSQAMITK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NVDFFQKSKVPNHLTFNSLQKKGLVNQI---LDRESIGLKINELLVVEYYSR 180


>gi|157689426|gb|ABV65269.1| ribosomal protein S4 [Brexia madagascariensis]
          Length = 181

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LTSKRP----RVGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     T+  ARQ VNHRH+LVNGR V+I SYRCK  D+
Sbjct: 56  KGSTGEILLQLLEMRLDNILFRLGMASTVPQARQLVNHRHILVNGRIVDIPSYRCKPRDI 115

Query: 141 IEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I  K + K    +          +VP++++++         +I  S       + +   L
Sbjct: 116 ITAKDEQKSRTLIQNYLDSFPHEEVPKHLTLHPIQYKGLVNQIIDSK---SIGLKINELL 172

Query: 200 VVEFYSR 206
           +VE+YSR
Sbjct: 173 IVEYYSR 179


>gi|162415134|gb|ABX89141.1| ribosomal protein S4 [Didymodon rigidulus var. ditrichoides]
          Length = 189

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    + +    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|162415108|gb|ABX89128.1| ribosomal protein S4 [Didymodon hedysariformis]
          Length = 189

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    + +    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|37548845|gb|AAO32691.1| ribosomal protein 4 [Notoligotrichum australe]
          Length = 184

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     +  +S         +      + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   PGLTNKTLQLKSGYINQAVSNKIFS--QYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYRCK  D
Sbjct: 58  AKGSTGQILLQLLEMRLDNIIFRLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRCKPQD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + +  A + +    +++  +P +++ N         +I   L      + +   
Sbjct: 118 FITIKDRQESQAIIAKNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|293611992|gb|ADE48440.1| ribosomal protein 4 [Encephalartos bubalinus]
 gi|293612000|gb|ADE48444.1| ribosomal protein 4 [Encephalartos manikensis]
          Length = 183

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       +R+        R+    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 57  AKGSTGQVLLQLLEMRSDNTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + K  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITVRDQQKSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|162415118|gb|ABX89133.1| ribosomal protein S4 [Bryoerythrophyllum inaequalifolium]
          Length = 188

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G      + +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 4   LPGLSNKIPHLKSSSTNQ--PTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVAR 60

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 61  KAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 120

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +  + K    + +    +++  +P +++ N         +I   L      + +  
Sbjct: 121 DFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNSLEKRGLINQI---LDQESIGLKINE 177

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 178 LLVVEYYSR 186


>gi|51860467|gb|AAU11370.1| ribosomal protein small subunit 4 [Gnetum parvifolium]
          Length = 199

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 10/204 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+        K P   +         R   K S     L+ KQK++ ++G +
Sbjct: 1   GPRFKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R   +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182
             VNI SY+CK  DVI +K K       +     ++  E  +P +++++         +I
Sbjct: 117 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + ++  LV+E+YSR
Sbjct: 177 IDRKD---IQLNIKEMLVIEYYSR 197


>gi|32892128|gb|AAP89003.1| ribosomal protein S4 [Passiflora rufa]
          Length = 183

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GTLPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGPVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++        +P ++++          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPWNKLPTHLTLYPKKYKGLVNQIIDSK---WVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INEFLVIEYYSR 181


>gi|307828432|gb|ADN95013.1| small ribosomal protein 4 [Fossombronia pusilla]
          Length = 184

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     +  +S         +K     + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   PGLTDRIIEPKSGYTSQLVSNKKMS--QYRIRLEEKQKLRFHYG-LTERQLLKYVRVARK 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LV+  +VNI SY CK GD
Sbjct: 58  AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPGD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + K  + +  +  L ++   P +++++   +  +  +           + +   
Sbjct: 118 VITVRNRQKSQSIIARSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WINLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|49182732|gb|AAT57828.1| small ribosomal protein [Jubulopsis novae-zelandiae]
          Length = 186

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 20  STSNKKISQYRIRLEEKQKLRFHYG-VTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++     PTI  ARQ VNHRH+ +N  +V+I SY C+ GD+I ++ + K  + + +   
Sbjct: 79  TIFCLGMAPTIPGARQLVNHRHISINNETVDIPSYNCEPGDIITIRNREKSQSIITKNLN 138

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + ++P ++++N   +  +              + +   LVVE+YSR
Sbjct: 139 SFHKSEIPNHLTLNSTQLRGSINTTIHR---EWIDLKVNELLVVEYYSR 184


>gi|42556472|gb|AAS19831.1| small ribosomal protein 4 [Odontoschisma sp. He-Nygren 702]
          Length = 191

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G +     K+  +  SY   +       K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGASPGLTGKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQSS 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L   LE RLD  V+R    PTI  ARQ VNHRH+ +N   ++I 
Sbjct: 57  KYVRIARKAKGSTGQVLPQLLEMRLDNTVFRLGMAPTIPGARQLVNHRHISINNDIIDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY  + GD+I +K K K  + + +   L ++  +P +++ +   +  +  +I +      
Sbjct: 117 SYDREPGDIITIKDKQKSRSIITKNINLFQKSKIPSHLTFDLTQLQGSVNQIVNR---EW 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 VNLKINELLVVEYYSR 189


>gi|32401765|gb|AAP80871.1| small ribosomal protein 4 [Pinus canariensis]
          Length = 184

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P N +        +    K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            R++G T   L+  LE RLD I++R    PTI  ARQ VNH H+ +N   V+I SY CK 
Sbjct: 56  RRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGHIRINDHMVDIPSYPCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            DVI ++ + +  A + +   L +RD +P +++ +         +I  S       + + 
Sbjct: 116 QDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFINQIIDSK---WINLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|37992547|gb|AAR06452.1| small ribosomal protein 4 [Hildebrandtiella endotrichelloides]
 gi|37992553|gb|AAR06455.1| small ribosomal protein 4 [Hildebrandtiella pachyclada]
          Length = 187

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY+C
Sbjct: 57  IARKTKGSTGEILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNCIVDIPSYQC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ +         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSFLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|42718090|gb|AAS38467.1| rps4 [Tayloria callophylla]
          Length = 189

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    +    ++      K S + ++L  KQK++ + G I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSNP---INQSTANKKISQYRIRLEEKQKLRFHXG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNH H+LVN   V+I SY
Sbjct: 57  VRIARKTKGSTGEILLQLLEMRLDNVIFRLGMSPTIPGARQLVNHXHILVNDHXVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P ++  N         +I   L      
Sbjct: 117 RCKPQDFITIKNRQKSQAIINKNIEFHQKYKIPTHLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576647|gb|AAF63936.1| ribosomal protein system 4 [Adelothecium bogotense]
          Length = 189

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 2   RLGVLPGLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LVN   V+I SY
Sbjct: 58  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMATTIPGARQLVNHRHILVNNFIVDIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 118 RCKPQDFITIKNQRKSEVIINKNIEFYQKSKIPNHLTYSSLEKKGVVNQI---LDCKSIG 174

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 175 LKINELLVVEYYSR 188


>gi|121761763|gb|ABM64968.1| ribosomal protein S4 [Plagiomnium rostratum]
          Length = 186

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGPTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E R D I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGEVLLQLPEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +     ++  +P++++ N  N      +I          + +  
Sbjct: 119 DFITIKDRQKSQIIISKNIDFYQKYKIPDHLTYNSLNKKGLVNQILDRD---SIDLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|15145822|gb|AAK83529.1| rps4 [Splachnum ampullaceum]
          Length = 189

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSP---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEILLQLLEMRLDNIIFRLGXAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I          
Sbjct: 117 RCKPQDFITIKDRQKSQXIISKNIEFYQKYKIPNHLIYNSLKKQGLVNQILDRQ---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|254935415|gb|ACT88095.1| ribosomal protein S4 [Pseudopanax linearis]
          Length = 181

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 5/179 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
                +      +   ++P++++++         +I  S       + +   LVVE+YS
Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYS 178


>gi|33413163|emb|CAD86718.1| ribosomal protein small subunit 4 [Dryptodon torquatus]
          Length = 181

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 12  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 70

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 71  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 130

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 131 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 179


>gi|225387211|ref|ZP_03756975.1| hypothetical protein CLOSTASPAR_00963 [Clostridium asparagiforme
           DSM 15981]
 gi|225046690|gb|EEG56936.1| hypothetical protein CLOSTASPAR_00963 [Clostridium asparagiforme
           DSM 15981]
          Length = 159

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 5/163 (3%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S +GLQLR KQK K  YG + EK FR+ + +A +  G    NL+  LE RLD +++R  
Sbjct: 1   MSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKASKMNGMVGTNLMILLECRLDNVLFRMG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERD 163
              T    RQ V+H+HVLVNG+ VNI SYR K GDVIE+K+K K      +  +    R 
Sbjct: 60  LGRTRKETRQIVDHKHVLVNGKPVNIPSYRVKTGDVIEIKEKYKSAQRYKDILEVTGGRM 119

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VP ++ V+ +N+  T   +P+  +     V +   L+VE YS+
Sbjct: 120 VPAWLDVDQENLRGTVKEMPTRDE---IDVPVNEMLIVELYSK 159


>gi|293611986|gb|ADE48437.1| ribosomal protein 4 [Dioon merolae]
          Length = 183

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       +R+        R+    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 57  AKGSTGQVLLQLLEMRSDNTIFRPGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + +  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|170516249|gb|ACB15126.1| small ribosomal protein 4 [Macrozamia moorei]
          Length = 186

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G       +R+        R+    S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 3   LPGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAG 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I  YRCK  
Sbjct: 59  RAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPGYRCKPR 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + K  A + +   L+++D +  +++++         +I  S       + +  
Sbjct: 119 DVITVRDQQKSRAMIEKNIDLSQKDQMSNHLTLHSSRYKGLVNQIIDSK---WISLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|255116232|gb|ACU01168.1| small ribosomal protein subunit 4 [Sematophyllum subpinnatum]
          Length = 189

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
            G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 2   FGTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 58  RIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ N         +I   L      +
Sbjct: 118 CKPQDFITIKNQQKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|77019197|emb|CAH60204.1| chloroplast 30S ribosomal protein S4 [Grimmia plagiopodia]
          Length = 185

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   PGLTNKIPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|11878077|gb|AAG40786.1| small ribosomal protein 4 [Tetraphis pellucida]
 gi|12330460|gb|AAG52767.1| ribosomal protein 4 [Tetraphis pellucida]
          Length = 186

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P     Y   ++      K S + ++L  KQK++ +YG I+E++     + 
Sbjct: 1   VLPGLTIKTPQLKSGY---INPSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK
Sbjct: 57  ARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +    +++  +P ++++N         ++   L      + +
Sbjct: 117 PQDFITIKDRQKSQNVIAKNMDFSQKYKIPNHLTLNSLQKKGLVNQV---LDREFIDLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|89112959|gb|ABD61098.1| ribosomal protein subunit 4 [Grimmia hartmanii]
          Length = 172

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  + +++
Sbjct: 62  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSKSMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSSENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|24473826|gb|AAL82756.1| small ribosomal subunit protein 4 [Rhodobryum roseum]
          Length = 187

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GALPGPTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYIR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC
Sbjct: 57  IARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           +  D I +K + K  A + +   L ++   P +++ N         +I   L      + 
Sbjct: 117 RPEDSITIKDRQKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|108861104|gb|ABG21424.1| ribosomal protein small subunit 4 [Marsilea nubica var. gymnocarpa]
          Length = 200

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKLIRRLKSLPGLTGKAPNPRESRV--ASDQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|37683564|gb|AAQ98833.1| small ribosomal protein 4 [Pogonatum neglectum]
          Length = 177

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 14  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNILF 72

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + +  A + +    ++
Sbjct: 73  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQ 132

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 133 KYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINELLVVEYYSR 175


>gi|74273141|gb|ABA01270.1| ribosomal protein S4 [Passiflora tricuspis]
          Length = 183

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIAGSAFL-------RSGKKSQYWIRLEEKQKLRFHYG-VTERQLLKYAR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|157689448|gb|ABV65280.1| ribosomal protein S4 [Clusia rosea]
          Length = 179

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 2   KRPRVGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAAKAKGSTGQV 60

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRH+L+NG  VNI SYRCK  D+I  + + 
Sbjct: 61  LLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILINGHIVNIPSYRCKPRDIITARDEQ 120

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           K  A +      + R ++P+++++          +I  S       + +   LVVE+YSR
Sbjct: 121 KSRAMIQNYLDSSSREELPKHLTLRPFEYKGLVNQIIDSK---WVGLKINELLVVEYYSR 177


>gi|74273125|gb|ABA01262.1| ribosomal protein S4 [Passiflora organensis]
          Length = 183

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|63191855|gb|AAY34887.1| small ribosomal protein subunit 4 [Aschisma carniolicum]
          Length = 172

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 6   SNSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K    + +   
Sbjct: 65  VIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVD 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 125 FSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 170


>gi|63191819|gb|AAY34869.1| small ribosomal protein subunit 4 [Dolotortula mniifolia]
          Length = 190

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGTLPRLSNKIPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI S
Sbjct: 57  YVRIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D I +  + K    + +     ++  +P ++  N         +I   L     
Sbjct: 117 YRCKPQDFITINDRKKSQIMITKNLDFFQKSKIPNHLIFNSLEKKGLINQI---LDQESI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 DLKINELLVVEYYSR 188


>gi|194738536|gb|ACF93825.1| small ribosomal protein 4 [Leptoscyphus intermedius]
          Length = 177

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 13/187 (6%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            +PKS    RS            K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 1   LKPKSSYIDRS--------TSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKT 51

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD+
Sbjct: 52  KGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDI 111

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           + ++ + K  + + +   L ++  +P ++  +   +  +  +I +        + +   L
Sbjct: 112 LTIRNRQKSQSIITKNINLFQKLKIPSHLIFDPIKLRGSITQIINR---EWINLKINELL 168

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 169 VVEYYSR 175


>gi|37683576|gb|AAQ98839.1| small ribosomal protein 4 [Pogonatum belangeri]
          Length = 179

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 16  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 74

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + K  A + +    ++
Sbjct: 75  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFIIIKNRQKSQAIIAKNIDFSQ 134

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 135 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 177


>gi|262192906|gb|ACY30470.1| small ribosomal subunit protein 4 [Pohlia annotina]
          Length = 188

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGALPGLTNKIPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDRLVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    V +     ++  +P  ++ N  N      +I   L      +
Sbjct: 117 CKPQDFITIKDRQKSQTMVSKNIDFYQKYKIPNNLTYNSLNKKGLVNQI---LDRESIDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|289599939|gb|ADD12920.1| ribosomal protein S4 [Hibbertia dilatata]
 gi|289599941|gb|ADD12921.1| ribosomal protein S4 [Hibbertia juncea]
          Length = 167

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNH+H+LVN R V+I SYRCK  D+I VK + K  A +     
Sbjct: 60  ILFRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDLITVKDEHKSRALIQNFLD 119

Query: 159 LA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++P+++++          +I  S       + +   LVVE+YSR
Sbjct: 120 SSLHEELPKHLTLQPFQYKGLVNQIIDSK---WIGLQINELLVVEYYSR 165


>gi|162415084|gb|ABX89116.1| ribosomal protein S4 [Syntrichia sinensis]
          Length = 189

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQILLQLLEMRLDNVIFRLSMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    + +    +++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINDRKKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|49182780|gb|AAT57852.1| small ribosomal protein [Pleurozia purpurea]
 gi|75858240|gb|ABA28694.1| small ribosomal protein 4 [Pleurozia purpurea]
          Length = 189

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     SY   L       K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGALXGLTNKTLKLKSSY---LDRSMSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A + +G T   L+  LE RLD  ++R   VPTI  ARQ VNHRH+L+N   V+I SY
Sbjct: 57  VRIARKIKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPGARQLVNHRHILINDNIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            C+ GDVI +K   K  + + +     +R  +P ++ ++         +           
Sbjct: 117 NCEPGDVIAIKNPEKNQSIITKNMNSFQRPKIPNHLVLDSTQFRGLVNKTIDR---ECID 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVEFYSR
Sbjct: 174 LKINELLVVEFYSR 187


>gi|15145862|gb|AAK83549.1| rps4 [Tayloria mirabilis]
          Length = 189

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRVARKAKGSTGEILLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P  +  N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFHQKYKIPNNLIYNSLKKQGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|7576635|gb|AAF63930.1| ribosomal protein system 4 [Lepidopilum surinamense]
          Length = 188

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K      S    +       K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGILPGLTNKITELKSSS---ITQSISNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH++VN   V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPAARQLVNHRHIVVNDYIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSEAIIKKNIEFYQKIKIPNHLTYNFVEKKGLINQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|254995551|emb|CAO82733.1| ribosomal protein S4 [Lycopodium sabinifolium]
          Length = 172

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                  S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   STPSXXXSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + +S+  A + + ++
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNE 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++   +P +++++         +I            +   LVVE+YSR
Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 170


>gi|293633989|gb|ADE60374.1| ribosomal protein subunit 4 [Lyellia aspera]
          Length = 183

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P     Y    +      K S + ++L  KQK++ +YG I+E++     + A  
Sbjct: 1   GLTNKTPQLKSGYS---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARG 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D
Sbjct: 57  AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A + +    +++  +P +++ N         +I   L      + +   
Sbjct: 117 FITIKDRQKSQAIIAKNIDFSQKYKIPNHLTFNSLEQKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|37683550|gb|AAQ98826.1| small ribosomal protein 4 [Pogonatum comosum]
          Length = 176

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 13  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 71

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + +  A + +    ++
Sbjct: 72  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQ 131

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINELLVVEYYSR 174


>gi|22854701|gb|AAN09770.1| small ribosomal protein 4 [Dicranoloma menziesii]
          Length = 185

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTSQLKSSSINQ--STSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNVIFRLGMXPTIPGARQLVNHRHILVNDRVVDIPSYRCKPR 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A +++    +++  VP +++ +         +I   L      + +  
Sbjct: 118 DFITIKDRRKSEAIIIKNIDFSQKHKVPNHLTFSSLEKKGLVNQI---LDQESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|162415098|gb|ABX89123.1| ribosomal protein S4 [Didymodon perobtusus]
          Length = 189

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
                    K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 2   FRTLPGLSNKTPHLKSSS---TNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 58  RIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +    +++  +P +++ N         +I   L      +
Sbjct: 118 CKPQDFITIKDRQKSQVIITKNVDFSQKSKIPNHLTFNSLEKKGLVNQI---LDQESIGL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|118577555|gb|ABL07143.1| small ribosomal protein 4 [Piper aduncum]
          Length = 179

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 2   KRPRSESSLRSQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLIRYVRIAGKAKGSTGRV 60

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + 
Sbjct: 61  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQ 120

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    V  +   A R ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 RSKVLVQNSMDSASREELPKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 177


>gi|77019173|emb|CAH60192.1| chloroplast 30S ribosomal protein S4 [Grimmia hartmanii]
          Length = 176

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 7   INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  + +++
Sbjct: 66  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSKSMIIK 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 126 NMDFSQKYKIPNHLTFNSSENKGLINQI---LDHESIGLKINELLVVEYYSR 174


>gi|311223008|gb|ADP76586.1| small ribosomal protein 4 [Pellia epiphylla]
 gi|311223010|gb|ADP76587.1| small ribosomal protein 4 [Pellia epiphylla]
          Length = 189

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K  +   S   G     +K   S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGTLPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY C+  DVI V  + K+   +       +  VP +++ +      +  +          
Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---ECI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 DLKINELLVVEYYSR 187


>gi|218157217|gb|ACK58425.1| ribosomal protein subunit 4 [Lyellia crispa]
          Length = 186

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S         +K   S + ++L  KQK++ +YG I+E++     + A 
Sbjct: 2   LPGLTNKTSQLKSGYSNQSVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
            ++G T   L+  LE RLD I+++    PTI  ARQ VNH+H+LVN R VNI SYRCK  
Sbjct: 59  GAKGSTGQILLQLLEMRLDNIIFQLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +     ++  +P +++ N         +I   L      + +  
Sbjct: 119 DFITIKDRQKSQAIIAKNIDFYQKYKIPNHLTFNSLEQKGLVNQI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|11228645|gb|AAG33108.1| small ribosomal protein 4 [Fissidens dubius]
          Length = 186

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 4   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 59

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 60  AKGSTGQVLLQLPEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQD 119

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K    +++    +++  +P +++ N         +I   L      + +   
Sbjct: 120 FITIKDQQKYQVMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQI---LDQESIGLKINEL 176

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 177 LVVEYYSR 184


>gi|14090474|gb|AAK53522.1| small ribosomal protein 4 [Fissidens mooreae]
          Length = 182

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKARQKSQVMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NVNFSQKYKVPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|37683578|gb|AAQ98840.1| small ribosomal protein 4 [Pogonatum usambaricum]
          Length = 180

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 17  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 75

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + K  A + +    ++
Sbjct: 76  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFIIIKNRQKSQAIIAKNIDFSQ 135

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 136 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|7524703|ref|NP_042457.1| ribosomal protein S4 [Pinus thunbergii]
 gi|1173263|sp|P41638|RR4_PINTH RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|1262697|dbj|BAA04412.1| ribosomal protein S4 [Pinus thunbergii]
          Length = 198

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++L  KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G +    I+  E RLD   +   +  T   ARQ VNH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKG-SRVRSIAITEMRLDKS-FSIGYGST-SGARQLVNHGH 112

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 113 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIKKNIDLFQRDKLPNHLTFHSLQYKGFI 172

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 173 NQIIDSK---WINLKINELLVVEYYSR 196


>gi|184127945|gb|ACC67872.1| ribosomal protein small subunit 4 [Marattia alata]
 gi|184127947|gb|ACC67873.1| ribosomal protein small subunit 4 [Marattia douglasii]
          Length = 190

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +  Q    K S + ++L AKQ+++  +G ++E++     + A
Sbjct: 1   DLPGLTNKTLKSKKAQIAI-DQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 59  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++     V +  +   +D +PE+++++    +       RI +        +
Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDKIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 NINELLVVEYYSR 188


>gi|108861074|gb|ABG21409.1| ribosomal protein small subunit 4 [Marsilea crotophora]
          Length = 200

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+P    S       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +           ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSVLEGNKPKGVVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|12330502|gb|AAG52788.1| ribosomal protein 4 [Macromitrium richardii]
          Length = 189

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  K+K++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKRKLRFHYG-ITERQLLNC 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K   K    + +     ++  +P ++            +I   L      
Sbjct: 117 RCKPLDFITIKDGQKSQDIINKNIDFYQKSKIPNHLIHXSLEKKGXVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|92417463|gb|ABE76827.1| ribosomal protein subunit 4 [Eurhynchium praelongum]
          Length = 189

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P         ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLXTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P +++ +         +I   L      
Sbjct: 117 RCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|77019201|emb|CAH60206.1| chloroplast 30S ribosomal protein S4 [Grimmia sessitana]
          Length = 195

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 26  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 84

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 85  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 144

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 145 NMDFSQKYKIPNHLTFNSLENKGLVNQI---LDHESIGLKINELLVVEYYSR 193


>gi|89147842|gb|ABD62769.1| ribosomal protein 4 [Takakia ceratophylla]
          Length = 168

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ ++G ++E++     + A R++G T    +  LE RLD 
Sbjct: 2   STXNXKXSQYRIRLEEKQKLRFHHG-LTERQLFKYVRIARRAKGSTGQVPLQLLEMRLDN 60

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R    PTI  ARQ VNHRH+LVN R+VNI S+RCK  D I +K + K  A + +   
Sbjct: 61  VIFRLGMAPTIPGARQLVNHRHILVNDRTVNIPSFRCKPQDFITIKDRQKSQAIITKNMD 120

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  +P ++++N         +I          + +   LVVE+YSR
Sbjct: 121 CSQKSKIPNHLTLNSSQKRGLVNQIIDR---ESIGLKINELLVVEYYSR 166


>gi|63101017|gb|AAY33133.1| small ribosomal protein 4 [Pterogoniadelphus montevidensis]
          Length = 186

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK
Sbjct: 57  ARKAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K  A + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|67035873|gb|AAY62863.1| small ribosomal protein subunit 4 [Clastobryella kusatsuensis]
          Length = 188

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE R D +++R     TI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLLEMRPDNVIFRLGMAATIPGARQLVNHRHILVNDCIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I          +
Sbjct: 117 CKPQDFITIKNQRKSETMISKNIEFYQKSKIPNHLTYSSLEKKGLVNQIVDR---ELIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|20531062|gb|AAM27353.1| ribosomal protein 4 [Atrichum altecristatum]
          Length = 187

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P     Y   ++      K S   ++L  KQK++ +YG I+ ++  +  +
Sbjct: 1   GALPGLTNKTPQLKSGY---INQAVSNKKISQXRIRLEEKQKLRFHYG-ITXRQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RLD I++R     TI  ARQ VNH+H+LVN   VNI SYRC
Sbjct: 57  IARRAKGSTGQILLQLLEMRLDNIIFRLGMASTIPGARQLVNHKHILVNDHIVNIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + +  A +   +  +++  +P +++ N         +I   L        
Sbjct: 117 KPQDFITIKDRQESQAIIARKNDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGXK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|311223000|gb|ADP76582.1| small ribosomal protein 4 [Noteroclada confluens]
 gi|311223004|gb|ADP76584.1| small ribosomal protein 4 [Noteroclada confluens]
 gi|311223006|gb|ADP76585.1| small ribosomal protein 4 [Noteroclada confluens]
          Length = 171

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 5   INQPTSSKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGEVLLQLLEMR 63

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD  ++R     TI  ARQ VNHRH+L+N   V+I SY C+ GDVI VK + +  + + +
Sbjct: 64  LDNTIFRLGMSSTIPGARQLVNHRHILINDNMVDIPSYNCEPGDVITVKNRRESQSIIAK 123

Query: 156 ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +     +P ++++N      +  ++ +        + +   LVVE+YSR
Sbjct: 124 NMEFQRPKIPNHLTLNSIQFQGSVNQVINR---ECIDLKINELLVVEYYSR 171


>gi|74273101|gb|ABA01250.1| ribosomal protein S4 [Passiflora candida]
          Length = 183

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++ + KQK++ +YG I+E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRFQEKQKLRLHYG-ITERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     ++ +P++++++          I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLHRIQYKGLVNEIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|254995571|emb|CAO82744.1| ribosomal protein S4 [Lycopodium casuarinoides]
          Length = 172

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S +G++L  KQK++ +YG ++E++     + A R++G T   L+  LE RLD 
Sbjct: 6   STPSKKFSQYGIRLEEKQKLRFHYG-LTEQQLLKYVRIARRAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + + +  A + +  +
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRPESRAIIAKNEK 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   +P +++++         +I          + +   LVVE+YSR
Sbjct: 125 FYQTCKIPNHLTLDSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170


>gi|12642254|gb|AAK00209.1| rps4 [Goniomitrium acuminatum]
          Length = 189

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 2   LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 58  RVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +  + K    + +    +++  +P +++ N         +I   L      +
Sbjct: 118 CKPQDFITINDRKKSQVMISKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESIGL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|254935399|gb|ACT88087.1| ribosomal protein S4 [Pseudopanax lessonii]
 gi|254935401|gb|ACT88088.1| ribosomal protein S4 [Pseudopanax lessonii]
 gi|254935403|gb|ACT88089.1| ribosomal protein S4 [Pseudopanax crassifolius]
 gi|254935405|gb|ACT88090.1| ribosomal protein S4 [Pseudopanax crassifolius]
 gi|254935407|gb|ACT88091.1| ribosomal protein S4 [Pseudopanax lessonii]
 gi|254935409|gb|ACT88092.1| ribosomal protein S4 [Pseudopanax gilliesii]
 gi|254935411|gb|ACT88093.1| ribosomal protein S4 [Pseudopanax ferox]
 gi|254935417|gb|ACT88096.1| ribosomal protein S4 [Pseudopanax chathamicus]
 gi|254935449|gb|ACT88112.1| ribosomal protein S4 [Pseudopanax ferox]
 gi|254935451|gb|ACT88113.1| ribosomal protein S4 [Pseudopanax ferox]
          Length = 181

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +      +  D +P+++++          +I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLRPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179


>gi|14090470|gb|AAK53520.1| small ribosomal protein 4 [Leucobryum tahitense]
          Length = 182

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 16  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K  + V +  +
Sbjct: 75  IIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIE 134

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  VP +++++         +I   L      + +   LVVE+YSR
Sbjct: 135 FSQKYKVPNHLTLDSLEKKGLVNQI---LNHESIGLKINELLVVEYYSR 180


>gi|51860569|gb|AAU11421.1| ribosomal protein small subunit 4 [Ephedra gerardiana]
          Length = 205

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63
              + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG
Sbjct: 4   RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 59

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LV
Sbjct: 60  -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 118

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178
           N   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N       
Sbjct: 119 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 178

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  +       + ++  LV+E+YSR
Sbjct: 179 VNKIIDTKD---LQLKIKEMLVIEYYSR 203


>gi|118626069|emb|CAL39338.1| small ribosomal protein 4 [Isopaches decolorans]
          Length = 153

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 86/155 (55%), Gaps = 5/155 (3%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             KQK++ +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  A
Sbjct: 1   EEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGA 59

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171
           RQ VNHRH+ VN  +V+I SY C+ GD+I +K K K  + + +   L ++  +P +++ +
Sbjct: 60  RQLVNHRHISVNNDTVDIPSYNCEPGDIITIKNKQKSQSIITKNINLFQKLKIPSHLTFD 119

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +  +  +  +        + +   LVVE+YSR
Sbjct: 120 LTQLRGSINQTVNR---EWVNLKINELLVVEYYSR 151


>gi|11228647|gb|AAG33109.1| small ribosomal protein 4 [Fissidens subbasilaris]
          Length = 185

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 3   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 59  AKGSTGQVLLQLPEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K    +++    +++  +P +++ N         +I   L      + +   
Sbjct: 119 FITIKDQQKYQIMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQI---LDQESIGLKINEL 175

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 176 LVVEYYSR 183


>gi|51860481|gb|AAU11377.1| ribosomal protein small subunit 4 [Ephedra aphylla]
          Length = 203

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62
               + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +Y
Sbjct: 1   YGGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHY 56

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L
Sbjct: 57  G-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177
           VN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N      
Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  +       + ++  LV+E+YSR
Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201


>gi|254935427|gb|ACT88101.1| ribosomal protein S4 [Pseudopanax laetus]
          Length = 181

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I+ R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQXLEMRLDNILXRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  +   +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179


>gi|37992733|gb|AAR06545.1| small ribosomal protein 4 [Zelometeorium recurvifolium]
          Length = 187

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P         ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+   E RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLPEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D + +K + K    + +  +  ++  +P +++           +I   L      + 
Sbjct: 117 KPQDFVTMKNQRKSETIISKNIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|63191845|gb|AAY34882.1| small ribosomal protein subunit 4 [Anoectangium aestivum]
          Length = 186

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 25  KISQYRIRLEEKQKLRFHYG-IXERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 83

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K    + +    +++ 
Sbjct: 84  GMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDFITIKNRQKSQVMITKNIDFSQKS 143

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 144 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 184


>gi|157689542|gb|ABV65327.1| ribosomal protein S4 [Polygala cruciata]
          Length = 179

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 12/188 (6%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P    +         R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKRPRALINKP-------RFRKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 52

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK  D
Sbjct: 53  AKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGHIVDIPSYRCKPQD 112

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I  +   K  A +    + +  + +P++++++         +I  S       + +   
Sbjct: 113 IITARDNQKSRALIQNYLESSPHEKLPKHLTLHPFQYKGLVNQIIDSK---WVGLKINEL 169

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 170 LVVEYYSR 177


>gi|293634003|gb|ADE60381.1| ribosomal protein subunit 4 [Notoligotrichum sp. Hedderson 14147]
          Length = 182

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ V H+H+LVN R VNI SYRCK  D I +K + +    + +    ++
Sbjct: 78  RLGMAPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQTIIAKNIDFSQ 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 138 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 180


>gi|51860537|gb|AAU11405.1| ribosomal protein small subunit 4 [Ephedra rupestris]
          Length = 206

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 6   GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 60

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 61  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 120

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 121 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 180

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 181 NKIIDTKD---LQLKIKEMLVIEYYSR 204


>gi|289599943|gb|ADD12922.1| ribosomal protein S4 [Hibbertia sphenandra]
          Length = 167

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNH+H+LVN R V+I SYRCK  D+I VK + K  A +     
Sbjct: 60  ILFRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNFLG 119

Query: 159 LA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++P+++++          +I  S       + +   LVVE+YSR
Sbjct: 120 SSLHEELPKHLTLQPFQYKGLVNQIIDSK---WIGLQINELLVVEYYSR 165


>gi|194738508|gb|ACF93811.1| small ribosomal protein 4 [Leptoscyphus amphibolius]
          Length = 177

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD + ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDTLTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  VP +++ +   +     ++ +        + +   LVVE+YSR
Sbjct: 130 LFQKLKVPSHLTFDPIKLRGFVNQMINR---ESINLKINELLVVEYYSR 175


>gi|162415102|gb|ABX89125.1| ribosomal protein S4 [Didymodon constrictus var. flexicuspis]
 gi|162415124|gb|ABX89136.1| ribosomal protein S4 [Didymodon rigidulus var. icmadophilus]
          Length = 188

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYR
Sbjct: 57  RVARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +  + K    + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITINNRKKSQVMIAKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37548889|gb|AAO32713.1| ribosomal protein 4 [Steereobryon subulirostrum]
          Length = 183

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D
Sbjct: 57  AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + +  A +      +++  +P +++ N         +I   L      + +   
Sbjct: 117 FITIKDRQEFQAIITRNINFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|46810992|gb|AAT01814.1| small ribosomal protein 4 [Austrofossombronia peruviana]
          Length = 168

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
               S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++
Sbjct: 5   NKXMSQYRIRLEEKQKLRFHYG-LTERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIF 63

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LV+  +VNI SY CK GDVI  + + +  + + ++  L +
Sbjct: 64  RLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPGDVITARNRHRSQSIIAKSMSLFQ 123

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R   P +++++   +  +  +           + +   LVVE+YSR
Sbjct: 124 RSKTPNHLTLDSTRLRGSINQTIDRD---WIDLKINELLVVEYYSR 166


>gi|52694762|gb|AAU85550.1| Rps4 [Brachytheciastrum trachypodium]
 gi|52694764|gb|AAU85551.1| Rps4 [Brachytheciastrum venustum]
          Length = 190

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 6   LPGLTNKTPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 62

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T    +  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 63  KAKGSTGEVSLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 122

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 123 DFITMKNQRKSETIINKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 179

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 180 LLVVEYYSR 188


>gi|14090482|gb|AAK53526.1| small ribosomal protein 4 [Campylopus umbellatus]
          Length = 182

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 16  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRHVLVN   VNI SYRCK  D I +K + K  + + +  +
Sbjct: 75  IIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIPSYRCKPQDFITIKNRQKSQSIIAKNLE 134

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLNINELLVVEYYSR 180


>gi|125662714|gb|ABN50307.1| small ribosomal protein 4 [Ephedra gerardiana]
          Length = 206

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 14/211 (6%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKK 60
           S+    + KI RR+        K P   +     +H   R   K S + + L+ KQK++ 
Sbjct: 2   SRYRGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNM 175
           +LVN   V+I SYRCK  D+I +K K  +   +       +       VP Y + N    
Sbjct: 117 ILVNHHIVDIRSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYSTFNLSQN 176

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +I  +       + ++  LV+E+YSR
Sbjct: 177 KGIVNKIIDTKN---LQLKIKEMLVIEYYSR 204


>gi|3914845|sp|O20208|RR4_DIEGR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292835|emb|CAA92536.1| ribosomal protein S4 [Dietes grandiflora]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P +    G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRPGS----GSDPKNQSRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPQDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|14090464|gb|AAK53517.1| small ribosomal protein 4 [Hypodontium dregei]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 72  LDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKYQAMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NLDFSQKTKVPNHLTFNSLEKNGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|184127977|gb|ACC67888.1| ribosomal protein small subunit 4 [Marattia sp. New Caledonia]
          Length = 194

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K+  + ++       Q    K S + ++L AKQ+++  YG ++E++   
Sbjct: 1   RRLKDLPGLTNKTLKSKKAQI--AIDQPASKKISQYCIRLEAKQRLRFNYG-LTERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I S
Sbjct: 58  HVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKD 188
           YRCK  D+I V+ ++     V +  +   +D +PE+++++    +       RI +    
Sbjct: 118 YRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD-- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 -SIGLNINELLVVEYYSR 192


>gi|22854743|gb|AAN09791.1| small ribosomal protein 4 [Trichodontium falcatum]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 21  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGQILLQLLEMRLDNVIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A + +    +++ 
Sbjct: 80  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDCITIKDRQKSQAMITKNVDFSQKY 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 140 KVPNHLTFNFLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|117306750|emb|CAH73343.1| ribosomal protein S4 [Acrocladium chlamydophyllum]
          Length = 183

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 57  AKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNQQKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|184128013|gb|ACC67906.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128051|gb|ACC67925.1| ribosomal protein small subunit 4 [Angiopteris angustifolia]
          Length = 189

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     + ++     +  Q    K S + ++L AKQ+++  +G ++E++     + A 
Sbjct: 1   LPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAG 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194
           D+I V+ ++     V +  +   +D +PE+++ +    +       RI +        + 
Sbjct: 119 DIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLD 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|32892126|gb|AAP89002.1| ribosomal protein S4 [Passiflora morifolia]
          Length = 185

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    +         R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVRIAV-------SRSGRKSQYCIRLEEKQKLRFHYG-VTERQLLKYAR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIAQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ +          +I          + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDRK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|17154479|emb|CAC83918.1| ribosomal protein S4 [Diplarrhena latifolia]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQVRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +  +       ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|125662698|gb|ABN50299.1| small ribosomal protein 4 [Metasequoia glyptostroboides]
          Length = 207

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 11/210 (5%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI  R+        K+P   RS  P      +  KPS + ++L+ KQ+++ +
Sbjct: 2   SRYRGPRLKIINRLKTLPGLSKKTP--NRSEQPSKKKHSKPPKPSKYPVRLKEKQRLRFH 59

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A R++G T   L+  LE RLD I++R     ++  ARQ +NHRH+
Sbjct: 60  YG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALSMPEARQLINHRHI 118

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MV 176
            VN R V+I SYRCK  D+I +K K +    + +   + ++D   VP ++++        
Sbjct: 119 RVNDRIVDIPSYRCKPQDLISIKDKQRLRNIINKNIDIFQKDKMRVPPHLNLIKKKSQYS 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I  + +     + +   LVVE+YSR
Sbjct: 179 GLVKKIIDNNR---IGLKINELLVVEYYSR 205


>gi|32401783|gb|AAP80880.1| small ribosomal protein 4 [Cedrus deodara]
          Length = 187

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 9/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +        K P     Y      +    K S + ++   KQK++ +YG ++E++     
Sbjct: 1   LKALPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H+ VN   V+I SY 
Sbjct: 56  RIARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSYP 115

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  DVI ++ + +  + + +   L +RD +P +++ N         +I  S       +
Sbjct: 116 CKPQDVITIRDQQRLRSIIKKNIDLFQRDKLPNHLTFNSLQYKGFINQIIDSK---WISL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 KINELLVVEYYSR 185


>gi|89112931|gb|ABD61084.1| ribosomal protein subunit 4 [Codriophorus aciculare]
          Length = 172

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R     TI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPHDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|289599953|gb|ADD12927.1| ribosomal protein S4 [Tetracera nordtiana]
          Length = 167

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +     
Sbjct: 60  ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SSPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165


>gi|225621051|ref|YP_002722309.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1]
 gi|225215871|gb|ACN84605.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1]
          Length = 189

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 6/193 (3%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +  +     K  +  +   PG   ++ K    Y G+Q+R KQK+K+ YG + EK+FR+ +
Sbjct: 2   LKGDRCLTAKCAITKKRDVPGPANRKMKQLSEY-GIQMREKQKVKRIYGVL-EKQFRNYY 59

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
            EA R  G +  NL+  LE RLD +VYR     +   ARQFV H  + VNG+ + I SY 
Sbjct: 60  HEAIRVAGVSGENLLRLLELRLDNVVYRLGLAKSRNQARQFVAHGFISVNGKRMTIPSYC 119

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
            K GD +   ++   +A V    +  + + VP ++S++  N     V +P   + + YP 
Sbjct: 120 VKVGDKVSFTERGNAVAEVKTIVEGLKSEYVPAWLSLDLSNKTGEIVTLPIR-EHIEYP- 177

Query: 194 IMQPNLVVEFYSR 206
            +   L++E+YS+
Sbjct: 178 -INEQLIIEYYSK 189


>gi|22854739|gb|AAN09789.1| small ribosomal protein 4 [Symblepharis vaginata]
          Length = 185

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 8/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKTPQLKSSS---NNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK 
Sbjct: 57  RKAKGSTGQILLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNDHIVNIPSYRCKP 116

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K +    A +++    +++  VP +++ N         +I   L      + + 
Sbjct: 117 QDFITIKNRQXSQAMIIKNVDFSQKXKVPNHLTFNSLEKKGLVNQI---LDQESIGLKIN 173

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 174 ELLVVEYYSR 183


>gi|125662728|gb|ABN50314.1| small ribosomal protein 4 [Ephedra major]
          Length = 203

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63
              + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG
Sbjct: 2   RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178
           N   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N       
Sbjct: 117 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 176

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  +       + ++  LV+E+YSR
Sbjct: 177 VNKIIDTKD---LQLKIKEMLVIEYYSR 201


>gi|289599957|gb|ADD12929.1| ribosomal protein S4 [Tetracera parviflora]
          Length = 167

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +     
Sbjct: 60  ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SSPHEELPKHLTLHAFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165


>gi|299139416|ref|ZP_07032591.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8]
 gi|298598685|gb|EFI54848.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8]
          Length = 207

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 8/203 (3%)

Query: 8   KHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           K K+ R +G  L G  K   +  R+Y PG HG+ ++   + FGLQLR KQK+  +YG + 
Sbjct: 6   KFKLQRSLGIELPGLGKPGALAKRNYPPGQHGRAQRPTMTQFGLQLREKQKLLFHYG-LR 64

Query: 67  EKKFRSIFKEADR-SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           E++ R   ++A   S  +   +LI  LE RLD +V+R  F  +I AARQ V+H H+LVNG
Sbjct: 65  EEQLRRFVRKARSLSASNWIESLIGLLERRLDNVVFRLGFGRSIAAARQLVSHGHILVNG 124

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIP 183
           R   IGS   + G+V+ + +K+ QL ++  + +     +P Y+ + +         + IP
Sbjct: 125 RRQTIGSMVLRPGEVVWLSEKAAQLEAIQSSLESPRLPLPSYLQLQNPGTPSKGIVLFIP 184

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +S      P       V E+Y++
Sbjct: 185 NSSH---IPFEFNKKQVAEYYAK 204


>gi|63078654|gb|AAY29413.1| ribosomal protein S4 [Weissia controversa]
          Length = 186

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 25  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 83

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K    + +    +++ 
Sbjct: 84  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSQVMITKNVDFSQKS 143

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 144 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 184


>gi|89112939|gb|ABD61088.1| ribosomal protein subunit 4 [Schistidium rivulare]
          Length = 172

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++D +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKDKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|46811064|gb|AAT01850.1| small ribosomal protein 4 [Xenothallus vulcanicola]
          Length = 175

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++     + A  ++G T   L+  LE RLD IV+
Sbjct: 12  NKKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVF 70

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA- 160
           R    PTI +ARQ VNHRH++VN  +VNI SY CK  DVI +K + +  + + +   L  
Sbjct: 71  RLGMAPTIPSARQLVNHRHIIVNDNAVNIPSYNCKPQDVITIKDRRESQSVITKNINLFR 130

Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ER +P +++ +      +  +I          + +   LVVE+YSR
Sbjct: 131 ERKIPNHLTFDSTRFCGSVNQIIDR---EWISLKINELLVVEYYSR 173


>gi|33413171|emb|CAD86721.1| ribosomal protein small subunit 4 [Schistidium crassipilum]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  A +++    +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|33413207|emb|CAD86739.1| ribosomal protein small subunit 4 [Cheilothela chloropus]
          Length = 185

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 8/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKTPQLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 56

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK 
Sbjct: 57  RKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNIPSYRCKP 116

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K + K  A +++    +++  VP +++ N         +I   L      + + 
Sbjct: 117 QDFITIKNRQKSQAMIIKNLTFSQKAKVPNHLTFNSLENKGLVNQI---LDQESIGLKIN 173

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 174 ELLVVEYYSR 183


>gi|77019205|emb|CAH60208.1| chloroplast 30S ribosomal protein S4 [Grimmia tergestina]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  A +++    +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDREKSQAIIVKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|37992627|gb|AAR06492.1| small ribosomal protein 4 [Papillaria imponderosa]
          Length = 186

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK
Sbjct: 57  ARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|77019163|emb|CAH60187.1| chloroplast 30S ribosomal protein S4 [Grimmia donniana]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKAPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  A +++    +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|197303838|ref|ZP_03168874.1| hypothetical protein RUMLAC_02577 [Ruminococcus lactaris ATCC
           29176]
 gi|197297131|gb|EDY31695.1| hypothetical protein RUMLAC_02577 [Ruminococcus lactaris ATCC
           29176]
          Length = 181

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 69/169 (40%), Positives = 95/169 (56%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           +R   K S +GLQLR KQK K  YG + EK FR+ + +A +  G T  NL+  LESRLD 
Sbjct: 17  KRANRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKAKQMEGMTGANLMIILESRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +V+R     T   ARQ V+H+HVLVNG+ VNI SY  K GD IE+K+  K      E  +
Sbjct: 76  VVFRLGLARTRKEARQIVDHKHVLVNGKQVNIPSYLVKAGDTIEIKENKKGSQRYKEILE 135

Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A   VPE++  + +N+  T   +P+        V +   L+VE YS+
Sbjct: 136 ATAGNMVPEWLEADAENLKGTVKELPAR---EAIDVPVDEMLIVELYSK 181


>gi|184127931|gb|ACC67865.1| ribosomal protein small subunit 4 [Danaea wendlandii]
          Length = 190

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +       K S + ++L AKQ+++  YG ++E++     + A
Sbjct: 1   DLPGLTTKTLKSKESQIAMD-PSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    P+I AARQ VNH+H+LVN R V+I SYRCK 
Sbjct: 59  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHKHILVNNRLVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++   + V    +  ++D +PE+++   +  D       +I +        +
Sbjct: 119 KDIINVRNQTNSHSLVKRNLESLDKDKIPEHLTLSLLEDDKPQGLVNKIVTRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 NINELLVVEYYSR 188


>gi|77019147|emb|CAH60179.1| chloroplast 30S ribosomal protein S4 [Grimmia anodon]
          Length = 182

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  A +++    +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|293612022|gb|ADE48455.1| ribosomal protein 4 [Zamia furfuracea]
 gi|293612026|gb|ADE48457.1| ribosomal protein 4 [Zamia katzeriana]
 gi|293612028|gb|ADE48458.1| ribosomal protein 4 [Zamia lacandona]
 gi|293612030|gb|ADE48459.1| ribosomal protein 4 [Zamia loddigesii]
 gi|293612032|gb|ADE48460.1| ribosomal protein 4 [Zamia paucijuga]
 gi|293612034|gb|ADE48461.1| ribosomal protein 4 [Zamia picta]
 gi|293612036|gb|ADE48462.1| ribosomal protein 4 [Zamia spartea]
 gi|293612038|gb|ADE48463.1| ribosomal protein 4 [Zamia standleyi]
          Length = 183

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       + +        R+    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSINDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 57  AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + +  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|293634101|gb|ADE60430.1| ribosomal protein subunit 4 [Polytrichastrum sexangulare]
          Length = 183

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   GLTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D
Sbjct: 57  AKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + +  A +      +++  +P +++ N         +I   L      + +   
Sbjct: 117 FITIKDRQESQAIIARNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRELIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|51860491|gb|AAU11382.1| ribosomal protein small subunit 4 [Ephedra monosperma]
          Length = 203

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63
              + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG
Sbjct: 2   RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LV
Sbjct: 58  -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178
           N   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N       
Sbjct: 117 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 176

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  +       + ++  LV+E+YSR
Sbjct: 177 VNKIIDTKD---LQLKIKEMLVIEYYSR 201


>gi|194738500|gb|ACF93807.1| small ribosomal protein 4 [Leptoscyphus amphibolius]
 gi|194738502|gb|ACF93808.1| small ribosomal protein 4 [Leptoscyphus amphibolius]
 gi|194738504|gb|ACF93809.1| small ribosomal protein 4 [Leptoscyphus amphibolius]
 gi|194738506|gb|ACF93810.1| small ribosomal protein 4 [Leptoscyphus amphibolius]
          Length = 177

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD + ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDTLTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +     ++ +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGFVNQMINR---ESINLKINELLVVEYYSR 175


>gi|15145834|gb|AAK83535.1| rps4 [Voitia hyperborea]
          Length = 189

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 8/192 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RXGALPGLTNKTPQLKSSST---NQSXANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R V+I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +   +  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIISKNIEFFXKYKIPNHLTYNFLKKQGLVNQI---LDCESIG 173

Query: 193 VIMQPNLVVEFY 204
           + +   LVVE+Y
Sbjct: 174 LKINELLVVEYY 185


>gi|51860503|gb|AAU11388.1| ribosomal protein small subunit 4 [Ephedra regeliana]
 gi|51860519|gb|AAU11396.1| ribosomal protein small subunit 4 [Ephedra fasciculata]
 gi|51860575|gb|AAU11424.1| ribosomal protein small subunit 4 [Ephedra monosperma]
          Length = 202

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYG 63
              + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG
Sbjct: 1   RGPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG 56

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LV
Sbjct: 57  -LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILV 115

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVAT 178
           N   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N       
Sbjct: 116 NHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGI 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +I  +       + ++  LV+E+YSR
Sbjct: 176 VNKIIDTKD---LQLKIKEMLVIEYYSR 200


>gi|51860477|gb|AAU11375.1| ribosomal protein small subunit 4 [Gnetum luofuense]
          Length = 202

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 10/204 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+          P   +         R   K S     L+ KQK++ ++G +
Sbjct: 4   GPRFKIIRRLKTLPGLTSNRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 59

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R   +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN 
Sbjct: 60  TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVND 119

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182
             VNI SY+CK  DVI +K K       +     ++  E  +P +++++         +I
Sbjct: 120 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKI 179

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + ++  LV+E+YSR
Sbjct: 180 IDRKD---IQLNIKEMLVIEYYSR 200


>gi|311223014|gb|ADP76589.1| small ribosomal protein 4 [Pellia neesiana]
          Length = 189

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K  +   S   G     +K   S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY C+  DVI V  + K+   +       +  VP +++ +      +  +          
Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---EFI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 DLKINELLVVEYYSR 187


>gi|74273097|gb|ABA01248.1| ribosomal protein S4 [Passiflora amoena]
          Length = 183

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R ++ S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIARSAF-------SRPARKSQYCIRLHEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     ++ +P+ ++++          I  S       + 
Sbjct: 113 KPRDLITVKDEKKSKDMIQNSLDSFRQEQLPKQLTLHRFQYKGLVNEIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|37992427|gb|AAR06392.1| small ribosomal protein 4 [Neodicladiella pendula]
 gi|255116234|gb|ACU01169.1| small ribosomal protein subunit 4 [Floribundaria setschwanica]
          Length = 186

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK
Sbjct: 57  ARKAKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|254995523|emb|CAO82719.1| ribosomal protein S4 [Diphasiastrum alpinum]
 gi|254995525|emb|CAO82720.1| ribosomal protein S4 [Diphasiastrum alpinum]
 gi|254995527|emb|CAO82721.1| ribosomal protein S4 [Diphasiastrum complanatum]
 gi|254995529|emb|CAO82722.1| ribosomal protein S4 [Diphasiastrum complanatum]
 gi|254995533|emb|CAO82724.1| ribosomal protein S4 [Diphasiastrum complanatum]
 gi|254995535|emb|CAO82725.1| ribosomal protein S4 [Diphasiastrum digitatum]
 gi|254995539|emb|CAO82727.1| ribosomal protein S4 [Lycopodium henryanum]
 gi|254995541|emb|CAO82728.1| ribosomal protein S4 [Lycopodium issleri]
 gi|254995543|emb|CAO82729.1| ribosomal protein S4 [Lycopodium issleri]
 gi|254995545|emb|CAO82730.1| ribosomal protein S4 [Lycopodium madeirense]
 gi|254995549|emb|CAO82732.1| ribosomal protein S4 [Diphasiastrum oellgaardii]
 gi|254995553|emb|CAO82734.1| ribosomal protein S4 [Diphasiastrum sitchense]
 gi|254995555|emb|CAO82735.1| ribosomal protein S4 [Lycopodium thyoides]
 gi|254995559|emb|CAO82737.1| ribosomal protein S4 [Diphasiastrum tristachyum]
 gi|254995561|emb|CAO82738.1| ribosomal protein S4 [Lycopodium veitchii]
 gi|254995563|emb|CAO82739.1| ribosomal protein S4 [Lycopodium wightianum]
 gi|254995565|emb|CAO82741.1| ribosomal protein S4 [Lycopodium zeilleri]
 gi|254995567|emb|CAO82742.1| ribosomal protein S4 [Lycopodium zeilleri]
 gi|255977012|emb|CAO82740.1| ribosomal protein S4 [Lycopodium zanclophyllum]
          Length = 172

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + +S+  A + + ++
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNE 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++   +P +++++         +I            +   LVVE+YSR
Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 170


>gi|51860559|gb|AAU11416.1| ribosomal protein small subunit 4 [Ephedra fragilis]
          Length = 204

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 4   GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 58

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 59  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 118

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 119 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 178

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 179 NKIIDTKD---LQLKIKEMLVIEYYSR 202


>gi|254935397|gb|ACT88086.1| ribosomal protein S4 [Pseudopanax crassifolius]
          Length = 181

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEXKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR VBI SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVBIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +      +  D +P+++++          +I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLRPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 179


>gi|194738520|gb|ACF93817.1| small ribosomal protein 4 [Leptoscyphus cuneifolius]
          Length = 177

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G     L+  LE RLD 
Sbjct: 11  STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSXGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R     TI  ARQ VNHRH+ +N   V+I SY C+ GD++ ++ + K  + + +   
Sbjct: 70  TIFRLGMSSTIPGARQLVNHRHISINDDIVDIPSYNCEPGDILTIRNRQKSQSIITKNIN 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +   +  +  ++ +        + +   LVVE+YSR
Sbjct: 130 LFQKLKIPSHLTFDPIKLRGSVTQMINR---EWINLKINELLVVEYYSR 175


>gi|74273243|gb|ABA01321.1| ribosomal protein S4 [Paropsia brazzaeana]
          Length = 200

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 14/193 (7%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P +          + R  K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGFTSKKPRD-------ESAESRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKGPIGLVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQL--AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K + K    +  +       + +PE+++ +  +      +I          +
Sbjct: 113 KPRDLITAKDEQKSKDMIQNSLNSFPKGKKLPEHLTFDPFH-KGLVNQIIDRK---WVGL 168

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 169 QINELLVVEYYSR 181


>gi|77019161|emb|CAH60186.1| chloroplast 30S ribosomal protein S4 [Grimmia dissimulata]
          Length = 177

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 8   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D I +K + K  + +++
Sbjct: 67  LDNVIFRLGMAPTIPGARQLVNHKHILVNNRIVNIPSYRCKPQDFITIKDRQKSQSMIIK 126

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 127 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 175


>gi|184128037|gb|ACC67918.1| ribosomal protein small subunit 4 [Angiopteris fokiensis]
          Length = 189

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     + ++     +  Q    K S + ++L AKQ+++  +G ++E++     + A 
Sbjct: 1   LPGLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAG 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194
           D+I V+ ++     V +  +   +D +PE+++++    +       RI +        + 
Sbjct: 119 DIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLD 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|66866247|gb|AAY57792.1| small ribosomal protein 4 [Bescherellia elegantissima]
          Length = 194

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 13/199 (6%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVDIASY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD------VPEYISVNHDNMVATFVRIPSSLK 187
           RCK  D I +K + K  A +         D      +P +++ +         +I   L 
Sbjct: 117 RCKPQDFITIKDRQKSQAIIXXXXXXKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LD 173

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 174 RESIGLKINELLVVEYYSR 192


>gi|125662706|gb|ABN50303.1| small ribosomal protein 4 [Ginkgo biloba]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P      G     +    K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----KSGNDPINRSSSGKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE R D I++R+    TI  ARQ VNHRH+LVN R V+I SYRCK
Sbjct: 56  ARKAKGSTGQVLLQLLEMRSDNIIFRSGMALTIPGARQLVNHRHLLVNDRVVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             DVI ++ + +  A +     L++RD +P +++++         RI  S       + +
Sbjct: 116 PQDVITIRDQQRSRAIIKNNINLSQRDKMPNHLTLHSSQYKGLVNRIIDSK---WINLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|77019155|emb|CAH60183.1| chloroplast 30S ribosomal protein S4 [Grimmia crinita]
          Length = 182

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMTPTIPGARQLVNHKHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  A +++    +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKNRQKSQAMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|293612014|gb|ADE48451.1| ribosomal protein 4 [Microcycas calocoma]
          Length = 176

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 9   NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 67

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + +  A + +  
Sbjct: 68  NTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIDKNL 127

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 128 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WINLKINELLVVEYYSR 174


>gi|74273119|gb|ABA01259.1| ribosomal protein S4 [Passiflora lobbii subsp. obtusiloba]
          Length = 183

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGQTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIMDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|293612020|gb|ADE48454.1| ribosomal protein 4 [Zamia angustifolia]
          Length = 183

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       + +        R+    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSINDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 57  AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + +  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITVRDQQRSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|293634017|gb|ADE60388.1| ribosomal protein subunit 4 [Oligotrichum obtusatum]
          Length = 178

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 15  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 73

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D I +K + +  A +      ++
Sbjct: 74  RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 133

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 134 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 176


>gi|89112929|gb|ABD61083.1| ribosomal protein subunit 4 [Bucklandiella heterosticha]
          Length = 172

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R     TI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|33413205|emb|CAD86738.1| ribosomal protein small subunit 4 [Ceratodon purpureus]
          Length = 182

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDNIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K    +++ +  +++  VP +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQKSKIMIIKNTNFSQKSKVPNHLTFNSLENKGLVNQI---LDQESVGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|77019149|emb|CAH60180.1| chloroplast 30S ribosomal protein S4 [Dryptodon anomalus]
          Length = 182

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQALLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  + +++    +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKNRQKSKSMIIKNMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|117306752|emb|CAH73345.1| ribosomal protein S4 [Cyathophorum africanum]
          Length = 183

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P    +    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKXPXLKSNL---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD +++R    PTI  ARQ VNH+H+LVNG  V+I SYRCK  D
Sbjct: 57  TKGSTGEVLLQLLEMRLDNVIFRLGIAPTIPGARQLVNHKHILVNGYIVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A + +  +L ++  +P ++S N      +  +I   L      + +   
Sbjct: 117 FITIKNQRKSEAIINKNIELDQKYKIPNHLSYNSLEKKGSVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|14090490|gb|AAK53530.1| small ribosomal protein 4 [Schistomitrium robustum]
          Length = 183

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+    +S            K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTXYQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 58  KGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  + V +  + +++  VP +++++         +I   L      + M   L
Sbjct: 118 ISIKNRQKSQSIVAKTIEFSQKYKVPNHLTLDSLEKKGLVNQI---LNHESIGLKMNELL 174

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 175 VVEYYSR 181


>gi|15991807|gb|AAF63982.2| small ribosomal protein 4 [Pogonatum urnigerum]
          Length = 181

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 18  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 76

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D I +K + +  A + +    ++
Sbjct: 77  RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIITKNIDFSQ 136

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 137 KYKIPNHLTFNSLEKKGLINQI---LDRESIGLKINELLVVEYYSR 179


>gi|63100969|gb|AAY33109.1| small ribosomal protein 4 [Homaliadelphus targionianus]
          Length = 186

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK
Sbjct: 57  ARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|12330546|gb|AAG52810.1| ribosomal protein 4 [Hedwigia ciliata]
          Length = 186

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTPQLKSSSINQSTPNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L   LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGEVLXQLLEMRLDNIIFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +     ++  +P +++ N         +I   L      + +  
Sbjct: 119 DFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYNSLQKKGXVNQI---LDRELIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|33413167|emb|CAD86720.1| ribosomal protein small subunit 4 [Racomitrium lanuginosum]
          Length = 179

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 13  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++   
Sbjct: 72  VIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIKNMD 131

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 FSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 177


>gi|67035845|gb|AAY62849.1| small ribosomal protein subunit 4 [Aptychopsis pyrrophylla]
          Length = 187

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNQRKSETIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|162415088|gb|ABX89118.1| ribosomal protein S4 [Tortula mucronifolia]
          Length = 188

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RIARKAKGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +  + K    + +     ++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITINDRKKSQVMITKNVDFYQKYKIPNHLTFNSLEKKGLINQI---LDQESIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|37992461|gb|AAR06409.1| small ribosomal protein 4 [Chrysocladium flammeum]
          Length = 186

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK
Sbjct: 57  ARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|28194755|gb|AAO33639.1|AF480994_1 ribosomal protein S4 [Tortula inermis]
          Length = 189

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L   QK++ +YG I+E++  + 
Sbjct: 1   RLGTLPGLSNKIPHLKSSS---TNQSTSNKKISXYRIRLEEXQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SY
Sbjct: 57  VRIARKAKGSTGQILLQLLEMRLDNVIFRFGMAPTIPGARQLVNHRHILVNNRIVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +  + K    + +     ++  +P +++ N         +I   L      
Sbjct: 117 RCKPQDFITINDRKKSQVMITKNVDFYQKSKIPNHLTFNSLEKKGLINQI---LDQESIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|293612024|gb|ADE48456.1| ribosomal protein 4 [Zamia inermis]
          Length = 173

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 6   NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 64

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + +  A + +  
Sbjct: 65  NTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIDKNL 124

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 125 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 171


>gi|293612010|gb|ADE48449.1| ribosomal protein 4 [Macrozamia lucida]
          Length = 183

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       +R+        R+    S + ++L  KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I  YRCK  D
Sbjct: 57  AKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPGYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI V+ + K  A + +   L+++D +  +++++         +I  S       + +   
Sbjct: 117 VITVRDQQKSRAMIEKNIDLSQKDQMSNHLTLHSSRYKGLVNQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|254935441|gb|ACT88108.1| ribosomal protein S4 [Pseudopanax discolor]
          Length = 181

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 4   KRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + 
Sbjct: 63  LLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASYRCKPRDIITARDEE 122

Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +      +  D +P+++++           I  S       + +   LVVE+YSR
Sbjct: 123 NSRTLIQNYLDSSSHDELPKHLTLRPFQYKGLVNXIIDSK---WVGLKINELLVVEYYSR 179


>gi|49182667|gb|AAT57796.1| small ribosomal protein [Aneura pinguis]
          Length = 191

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 9/197 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR G       K+P +               K S + ++L  KQK++ +YG ++E++
Sbjct: 2   KIIRRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                  A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++
Sbjct: 58  LLKYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIID 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189
           I SY CK GDVI +  + K     + + Q  +  +P +++ +    V +  +I       
Sbjct: 118 IPSYNCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD--- 172

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 173 WIYLKINELLVVEYYSR 189


>gi|51860487|gb|AAU11380.1| ribosomal protein small subunit 4 [Ephedra distachya]
 gi|51860525|gb|AAU11399.1| ribosomal protein small subunit 4 [Ephedra pedunculata]
 gi|51860529|gb|AAU11401.1| ribosomal protein small subunit 4 [Ephedra frustillata]
 gi|51860543|gb|AAU11408.1| ribosomal protein small subunit 4 [Ephedra tweediana]
 gi|51860545|gb|AAU11409.1| ribosomal protein small subunit 4 [Ephedra chilensis]
 gi|51860549|gb|AAU11411.1| ribosomal protein small subunit 4 [Ephedra breana]
          Length = 202

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 2   GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 117 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 177 NKIIDTKD---LQLKIKEMLVIEYYSR 200


>gi|184127923|gb|ACC67861.1| ribosomal protein small subunit 4 [Danaea leprieurii]
          Length = 189

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +    +K   S + ++L AKQ+++  YG ++E++     + A
Sbjct: 1   DLPGLTTKTLKSKESQIAMDPASKK--ISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIA 57

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    P+I AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 58  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRLVDIPSYRCKP 117

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++   + V  + +   +D +PE+++      D       +I +        +
Sbjct: 118 KDIINVRNQTNSQSLVKRSLESLNKDKIPEHLTFSLLEDDKPQGLVNKIVTRD---SIGL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 NINELLVVEYYSR 187


>gi|33413185|emb|CAD86729.1| ribosomal protein small subunit 4 [Campylopus introflexus]
          Length = 182

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 16  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRHVLVN   VNI SYRCK  D I +K + K  + +    +
Sbjct: 75  IIFRLGMAPTIPGARQLVNHRHVLVNNYIVNIPSYRCKPQDFITIKNRQKSQSIIARNLE 134

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLNINELLVVEYYSR 180


>gi|14090484|gb|AAK53527.1| small ribosomal protein 4 [Campylopus eberhardtii]
          Length = 182

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 16  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRHVLVN   VNI SYRCK  D I +K + K  + + +  +
Sbjct: 75  IIFRLGMAPTIPGARQLVNHRHVLVNNXIVNIPSYRCKPQDFITIKXRQKSQSMIAKNVE 134

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LXHESIGLNINELLVVEYYSR 180


>gi|254995537|emb|CAO82726.1| ribosomal protein S4 [Lycopodium habereri]
 gi|254995557|emb|CAO82736.1| ribosomal protein S4 [Diphasiastrum tristachyum]
          Length = 168

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 2   STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 60

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + +S+  A + + ++
Sbjct: 61  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNE 120

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++   +P +++++         +I            +   LVVE+YSR
Sbjct: 121 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 166


>gi|3914852|sp|O20231|RR4_HEAMA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292888|emb|CAA92551.1| ribosomal protein S4 [Scadoxus puniceus]
          Length = 182

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L    R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNPLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +      A R ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNFIASAPREELPNHLTIDSFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|108861062|gb|ABG21403.1| ribosomal protein small subunit 4 [Marsilea ancylopoda]
          Length = 200

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSNNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|6012947|emb|CAA58944.2| ribosomal protein S4 [Polypodium vulgare]
          Length = 201

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 8/206 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K+ RR+        KS +           Q    K S F ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLKLIRRLKNLPGFVGKSKMPNLGEFRVATDQSSSRKISQFCVRLEAKQRLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++     + A ++RG T   L+  LE RLD +++      T+ AARQ VNHRH
Sbjct: 61  NYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDNVIFHLGLASTVPAARQLVNHRH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVA 177
           +LVN   V+I SYRCK  D+I V+ +     ++      A +  P++++++    +    
Sbjct: 120 ILVNSCVVDIPSYRCKPKDIITVRNRPTSYNALKNKFTGATKR-PDHLTISLSKDNKPTG 178

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEF 203
               I          + +   LVVE+
Sbjct: 179 LVNCI---ANRESVNLNINELLVVEY 201


>gi|284468549|gb|ADB90335.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 186

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|125662684|gb|ABN50292.1| small ribosomal protein 4 [Sequoia sempervirens]
          Length = 207

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 11/210 (5%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI  R+        K+P   RS  P      +  KPS + ++L+ KQ+++ +
Sbjct: 2   SRYRGPRLKIINRLKILPGLSKKTP--NRSEQPSKKKHSKPPKPSKYPVRLKEKQRLRFH 59

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A R++G T   L+  LE RLD I++R     +I  ARQ VNHRH+
Sbjct: 60  YG-LAERQLLQYVRIAKRAKGSTGQVLLQLLEMRLDNILFRLGMALSIPEARQLVNHRHI 118

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MV 176
           LVN R V+I SYRCK  D I +K K +    + +     ++D   VP ++ +        
Sbjct: 119 LVNDRIVDIPSYRCKPQDFISIKDKQRLRNIINKNIDNFKKDKMRVPPHLKLIKKKSQYS 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I  + +     + +   LVVE+YSR
Sbjct: 179 GLVHKIIDNSR---IGLKINELLVVEYYSR 205


>gi|184127929|gb|ACC67864.1| ribosomal protein small subunit 4 [Danaea nodosa]
          Length = 190

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +       K S + ++L AKQ+++  YG ++E++     + A
Sbjct: 1   DLPGLTTKTLKSKESQIAMD-PSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    P+I AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 59  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPSIPAARQLVNHRHILVNNRLVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++   + V    +  ++D +PE+++   +  D       +I +        +
Sbjct: 119 KDIINVRNQTNSHSLVKRNLESLDKDKIPEHLTLSLLEDDKPQGLVNKIVTRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 NINELLVVEYYSR 188


>gi|11121137|emb|CAC14784.1| ribosomal protein subunit 4 [Hedwigia ciliata]
          Length = 185

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQSTPNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVN   V I SYRCK  
Sbjct: 58  KAKGSTGEVLLQLLEMRLDNIIFRLGMASTIPAARQLVNHRHILVNDHIVXIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +     ++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQKSQAIISKNIDFYQKSKIPNHLTYNSLQKKGLINQI---LDRELIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|16565357|gb|AAL26197.1|AF313590_1 small ribosomal protein 4 [Equisetum x ferrissii]
          Length = 196

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 9/199 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+ +NL G     V ++        Q  + K S +G++L AKQ+++  YG ++E++  
Sbjct: 1   IRRL-QNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A  ++G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH+LVN R V++ 
Sbjct: 59  NYVRIARCAKGSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRHILVNNRIVDVP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLK 187
           S+ CK  D+I +       + + +  +  A+  VPE++++              + +   
Sbjct: 119 SFHCKPKDIITIGSPKTYQSILTKRIESFAKDQVPEHLTLSLSEPKKPKGFVNYLINR-- 176

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 177 -ESIGLKINELLVVEYYSR 194


>gi|14090468|gb|AAK53519.1| small ribosomal protein 4 [Leucobryum antillarum]
          Length = 182

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 16  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K  + V +  +
Sbjct: 75  ILFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIE 134

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 135 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLKINELLVVEYYSR 180


>gi|293634067|gb|ADE60413.1| ribosomal protein subunit 4 [Polytrichadelphus innovans]
          Length = 182

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A R+
Sbjct: 1   LTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R +NI SYRCK  D 
Sbjct: 57  KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIINIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + +  A +      +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQESQAIITRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|63191795|gb|AAY34857.1| small ribosomal protein subunit 4 [Aloina rigida]
          Length = 191

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            R +G       K P    S     +      K S + ++L  KQK++ +YG I+E++  
Sbjct: 1   IRXLGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI 
Sbjct: 57  NYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SYRCK  D I +  + K    + +     ++   P +++ N         +I   L    
Sbjct: 117 SYRCKPQDFITINDRKKSQVMITKNVDFYQKYKRPNHLTFNSLEKKGLINQI---LDQES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|67035825|gb|AAY62843.1| small ribosomal protein subunit 4 [Acanthorrhynchium papillatum]
          Length = 185

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 58  KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 118 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|51860515|gb|AAU11394.1| ribosomal protein small subunit 4 [Ephedra aspera]
 gi|51860547|gb|AAU11410.1| ribosomal protein small subunit 4 [Ephedra multiflora]
 gi|51860551|gb|AAU11412.1| ribosomal protein small subunit 4 [Ephedra boelkei]
 gi|51860557|gb|AAU11415.1| ribosomal protein small subunit 4 [Ephedra fragilis]
          Length = 202

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 2   GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 117 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 177 NKIIDTKD---LQLKIKEMLVIEYYSR 200


>gi|3098218|gb|AAC15557.1| small ribosomal protein 4 [Ulota phyllantha]
          Length = 188

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 7/190 (3%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 3   SLPGLTNKTPQLKSSSVNQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 59

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD +++R    PTI  ARQ VNH+H++VN R V+I SYRCK 
Sbjct: 60  RKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHKHIIVNXRIVDIPSYRCKP 119

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I ++ + K    + +     ++  +P +++ N         +I   L      + + 
Sbjct: 120 QDFITIRNRQKSQDIITKNIDFYQKSKIPNHLTYNSLEKKGFVNQI---LDRELIGLKIN 176

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 177 ELLVVEYYSR 186


>gi|289599927|gb|ADD12914.1| ribosomal protein S4 [Hibbertia hypericoides]
          Length = 167

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A + +G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKVKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +     
Sbjct: 60  ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SSPHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 165


>gi|29422395|gb|AAO84593.1| small ribosomal protein 4 [Philonotis scabrifolia]
          Length = 199

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+        K+P    S    +       K S + ++L  KQK++ +YG
Sbjct: 1   YRGLRVRIIRRLXAFPGLTNKTPQLESSS---IXQSTSNKKISQYRIRLEEKQKLRCHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+  LE RLD +++R     TI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAXTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N R V+I SYRCK  D I +K + K  A + +     ++  +P++++ N         +I
Sbjct: 117 NBRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPBHLTYNSLENKGLVNQI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYS 205
              L      + M   LVV +YS
Sbjct: 177 ---LDRESIGLKMNXLLVVXYYS 196


>gi|162415132|gb|ABX89140.1| ribosomal protein S4 [Didymodon rufidulus]
          Length = 188

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLSNKIPHLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +  + K    + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|124021094|gb|ABM88820.1| small ribosomal protein subunit 4 [Aneura pinguis]
          Length = 192

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+P +               K S + ++L  KQK++ +YG ++E++  
Sbjct: 2   IRRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I 
Sbjct: 58  KYVFTARGAKGSTGQFLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHVSINEHIIDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +  + K       + + L + ++P +++ +    + +  +I        
Sbjct: 118 SYNCKPGDIITINNREKCRLVNWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 174

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 175 IYLKINELLVVEYYSR 190


>gi|74273131|gb|ABA01265.1| ribosomal protein S4 [Passiflora punctata]
          Length = 183

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ ++ +       +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRTNLPTHLILSPEKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INEFLVIEYYSR 181


>gi|293633993|gb|ADE60376.1| ribosomal protein subunit 4 [Notoligotrichum australe]
          Length = 181

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 18  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 76

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ V H+H+LVN R VNI SYRCK  D I +K + +  A + +    ++
Sbjct: 77  RLGMTPTIPGARQLVTHKHILVNNRIVNIPSYRCKPQDFITIKDRQESQAIIAKNIDFSQ 136

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 137 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 179


>gi|74273203|gb|ABA01301.1| ribosomal protein S4 [Passiflora cuprea]
          Length = 183

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R S+ S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPIVGSAF-------SRSSRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|293634065|gb|ADE60412.1| ribosomal protein subunit 4 [Polytrichadelphus giganteus]
          Length = 178

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 15  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 73

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + +  A ++     ++
Sbjct: 74  RLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKPQDFITIKDRQESQAIIIRNIDFSQ 133

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 134 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 176


>gi|284468537|gb|ADB90329.1| ribosomal protein subunit 4 [Scleropodium cespitans]
 gi|284468541|gb|ADB90331.1| ribosomal protein subunit 4 [Scleropodium cespitans]
          Length = 185

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 58  KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 118 DFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|255116220|gb|ACU01162.1| small ribosomal protein subunit 4 [Acroporium secundum]
          Length = 185

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 58  KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L+     + +  
Sbjct: 118 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLINQI---LERESIGLKINE 174

Query: 198 NLVVEFYSR 206
            L+VE+YSR
Sbjct: 175 LLIVEYYSR 183


>gi|89112933|gb|ABD61085.1| ribosomal protein subunit 4 [Codriophorus carinatus]
          Length = 172

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R     TI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMASTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|323652540|gb|ADX98521.1| ribosomal protein S4 [Cinnamodendron ekmanii]
          Length = 186

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 10/191 (5%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  +        G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   LPGLTRK---RPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVRIAG 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISV--NHDNMVATFVRIPSSLKDVPYPVIM 195
           D+I  K + +  A +  +   +   ++ +++S+  +         +I  S       + +
Sbjct: 117 DIITTKDEQRSRALIQNSIDSSPHEELAKHLSLYSSQSQYKGVVNQIIDSK---WIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|255116224|gb|ACU01164.1| small ribosomal protein subunit 4 [Meteoriella soluta]
          Length = 186

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK
Sbjct: 57  ARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLVNKI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|46486582|gb|AAS98727.1| ribosomal protein subunit 4 [Hypnodendron arcuatum]
          Length = 185

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 58  KTKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +     ++  +P +++ +         +I   L      + +  
Sbjct: 118 DFITIKDRPKSQAIISKNIDFYQKYKIPNHLTYSSLEKKGFINQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|293612018|gb|ADE48453.1| ribosomal protein 4 [Zamia acuminata]
          Length = 183

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K P            Q    K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   PGLTNKRP----KSINDPTNQSSYRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAG 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 56  RAKGSTGQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPR 115

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           DVI V+ + +  A + +   L+++D +P +++++         +I  S       + +  
Sbjct: 116 DVITVRDQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINE 172

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 173 LLVVEYYSR 181


>gi|51860479|gb|AAU11376.1| ribosomal protein small subunit 4 [Ephedra laristanica]
 gi|51860483|gb|AAU11378.1| ribosomal protein small subunit 4 [Ephedra aphylla]
 gi|51860485|gb|AAU11379.1| ribosomal protein small subunit 4 [Ephedra fragilis]
 gi|51860489|gb|AAU11381.1| ribosomal protein small subunit 4 [Ephedra fedtschenkoae]
 gi|51860495|gb|AAU11384.1| ribosomal protein small subunit 4 [Ephedra saxatilis]
 gi|51860499|gb|AAU11386.1| ribosomal protein small subunit 4 [Ephedra sinica var. pumila]
 gi|51860505|gb|AAU11389.1| ribosomal protein small subunit 4 [Ephedra transitoria]
 gi|51860511|gb|AAU11392.1| ribosomal protein small subunit 4 [Ephedra torreyana var.
           powelliorum]
 gi|51860533|gb|AAU11403.1| ribosomal protein small subunit 4 [Ephedra americana]
 gi|51860535|gb|AAU11404.1| ribosomal protein small subunit 4 [Ephedra gracilis]
 gi|51860553|gb|AAU11413.1| ribosomal protein small subunit 4 [Ephedra compacta]
 gi|51860555|gb|AAU11414.1| ribosomal protein small subunit 4 [Ephedra fragilis]
 gi|51860561|gb|AAU11417.1| ribosomal protein small subunit 4 [Ephedra foeminea]
 gi|51860571|gb|AAU11422.1| ribosomal protein small subunit 4 [Ephedra przewalskii]
 gi|51860573|gb|AAU11423.1| ribosomal protein small subunit 4 [Ephedra przewalskii]
 gi|51860577|gb|AAU11425.1| ribosomal protein small subunit 4 [Ephedra sinica]
 gi|51860583|gb|AAU11428.1| ribosomal protein small subunit 4 [Ephedra major subsp. procera]
 gi|51860585|gb|AAU11429.1| ribosomal protein small subunit 4 [Ephedra saxatilis var.
           sikkimensis]
 gi|51860587|gb|AAU11430.1| ribosomal protein small subunit 4 [Ephedra saxatilis]
 gi|51860589|gb|AAU11431.1| ribosomal protein small subunit 4 [Ephedra sp.]
          Length = 201

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 1   GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 56  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 116 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 176 NKIIDTKD---LQLKIKEMLVIEYYSR 199


>gi|111283696|gb|ABH09198.1| small ribosomal protein 4 [Herzogianthus vaginatus]
          Length = 186

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 8/193 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + +I RR+G       K+      Y   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVRIIRRLGALPGLTGKTLKPKSGY---IDRSTSNKKVSQYRVRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNH H+++N 
Sbjct: 57  TERQLLKYVRIARKAKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGARQLVNHGHIVINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GDVI ++ K K  + +     L  +  +  +++++   +  +  +   
Sbjct: 117 DIVDIPSYNCEAGDVITIRNKQKSQSIITRNINLFRKLKISNHLTLDSTQLRGSVNQ--- 173

Query: 185 SLKDVPYPVIMQP 197
            +      + +  
Sbjct: 174 RIHREWISLKINE 186


>gi|37992711|gb|AAR06534.1| small ribosomal protein 4 [Trachypodopsis formosana]
          Length = 186

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 8/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + 
Sbjct: 1   TLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYVRI 56

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK
Sbjct: 57  ARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCK 116

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             D I +K + K    + +  +  ++  +P +++ +         +I   L      + +
Sbjct: 117 PQDFISIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|51860469|gb|AAU11371.1| ribosomal protein small subunit 4 [Gnetum leyboldii]
          Length = 200

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65
            + KI RR+        K P   +    G+    R   K S     L+ KQK++ ++G +
Sbjct: 3   PRFKIIRRLNTLPGLTSKQPKYKK----GVRQSSRPWWKKSQHLACLQEKQKIRFHFG-L 57

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R   + A + +G T   L+  LE RLD I+Y+     TI AARQ VNHRH+LVN 
Sbjct: 58  TERQLRQYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLTGTIPAARQLVNHRHILVND 117

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182
             VNI SYRCK  DVI +K K+      +     ++  E  +P +++++         +I
Sbjct: 118 HVVNIPSYRCKPQDVITIKGKNPDQLKTIITRNRNKTRENKIPYHLTLDLSQKKGIVNKI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + ++  LV+E+YSR
Sbjct: 178 IDRKD---IQLNIKEMLVIEYYSR 198


>gi|63191716|gb|AAY34818.1| small ribosomal protein subunit 4 [Trachycystis microphylla]
          Length = 182

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K    + +
Sbjct: 72  LDNIIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQTIISK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ N  N      +I   L      + +   LVVE+YSR
Sbjct: 132 NIDFYQKYKIPNHLTYNSLNKKGLVNQI---LDRESIDLKINELLVVEYYSR 180


>gi|51860521|gb|AAU11397.1| ribosomal protein small subunit 4 [Ephedra californica]
          Length = 201

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 1   GPRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 56  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 116 HHIVDIPSYRCKPQDIITLKGKDPERLKIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 176 NKIIDTKD---LQLKIKEMLVIEYYSR 199


>gi|77019157|emb|CAH60184.1| chloroplast 30S ribosomal protein S4 [Grimmia ramondii]
          Length = 182

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSS---INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K  + +++     ++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKDRQKSKSMIIKNMDFYQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|222103436|gb|ACM44247.1| small ribosomal protein subunit 4 [Polytrichum juniperinum]
          Length = 180

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 17  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 75

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D I +K + +  A +      ++
Sbjct: 76  RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 135

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 136 NYKIPNHLTFNSLEKKGLVNQI---LDRESINLKINELLVVEYYSR 178


>gi|328541136|gb|AEB21792.1| ribosomal protein S4 [Telaranea meridiana]
          Length = 177

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 13/186 (6%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
           +PK   N RS              S + ++L  KQK++ +YG ++E++     + A +++
Sbjct: 1   KPKXXYNDRS--------TSNKXVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAK 51

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           G T   L+  LE RLD  + R     TI  ARQ VNHRH+ +N   V+I SY C+ GDVI
Sbjct: 52  GSTGQVLLQLLEMRLDNTILRLGMASTIPGARQLVNHRHISINNNIVDIPSYNCESGDVI 111

Query: 142 EVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
            +K K K  + + +   L +   +P +++ +   +  +  +  +        + +   LV
Sbjct: 112 TIKDKQKSRSIITKNINLFQNLKIPSHLTFDSIKLCGSINQTINR---EWINLKINELLV 168

Query: 201 VEFYSR 206
           VE+YSR
Sbjct: 169 VEYYSR 174


>gi|77019141|emb|CAH60271.1| chloroplast 30S ribosomal protein S4 [Grimmia mollis]
          Length = 177

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 8   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 67  LDNIIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 126

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 127 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 175


>gi|3914855|sp|O20236|RR4_ISOTA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292913|emb|CAA92541.1| ribosomal protein S4 [Isophysis tasmanica]
          Length = 182

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|293634009|gb|ADE60384.1| ribosomal protein subunit 4 [Oligotrichum afrolaevigatum]
          Length = 176

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 13  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 71

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D I +K + +  A +      ++
Sbjct: 72  RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 131

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 174


>gi|62766396|gb|AAX99325.1| rpS4 [Helminthostachys zeylanica]
          Length = 191

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 12/196 (6%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G +     K+P + +        Q    K S + ++L AKQK++  +G ++E++     
Sbjct: 2   LGNSPGLTNKTPKSKKI----GSDQSISRKISQYCIRLEAKQKLRFNHG-LTERQLLKYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R+ G T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY 
Sbjct: 57  RTARRASGSTGQVSLQLLEMRLDNIIFRLGISPTIPGARQLVNHRHILVNDRIVDIPSYH 116

Query: 135 CKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVP 190
           CK  DVI V+ ++     +  +    AE  +P ++S+     D +     R+        
Sbjct: 117 CKANDVITVRDQNNSRNLIGKDVGSSAEGRIPNHLSLSLSEDDKLKGFVNRMIDR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   L+VE+YSR
Sbjct: 174 IGLKVNELLIVEYYSR 189


>gi|46811054|gb|AAT01845.1| small ribosomal protein 4 [Sphaerocarpos texanus]
          Length = 179

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 7/183 (3%)

Query: 25  SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
             + T+S         +K   S + ++L  KQK++ +YG ++E++     + A +++G T
Sbjct: 1   KTLKTKSGYINQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGST 57

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              L+  LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I SY CK  DVI +K
Sbjct: 58  GQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILINNNTVDIPSYSCKPKDVITIK 117

Query: 145 QKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
            + K  + + +     ++  +P ++S +         +I          + +   LVVE+
Sbjct: 118 DRQKSQSIITKNINSFQKPKIPNHLSFDLIQFKGVVNQIIDR---ESIYLKINELLVVEY 174

Query: 204 YSR 206
           YSR
Sbjct: 175 YSR 177


>gi|89112943|gb|ABD61090.1| ribosomal protein subunit 4 [Grimmia cribrosa]
 gi|89112955|gb|ABD61096.1| ribosomal protein subunit 4 [Grimmia ungeri]
          Length = 172

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|12545452|ref|NP_075002.1| ribosomal protein S4 [Euglena longa]
 gi|14285747|sp|P58134|RR4_ASTLO RecName: Full=Plastid 30S ribosomal protein S4
 gi|12329916|emb|CAC24613.1| ribosomal protein S4 [Euglena longa]
          Length = 206

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 6/208 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +      K+ R++G       K                   K S + ++L+ KQK++ 
Sbjct: 1   MVRYLGPHVKVIRKLGSLRAFTKKKIKRYFKLDTKKRKLSFNKKTSKYKIRLKEKQKLRF 60

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +  ISEK+  +  K+A + +G +  NL+  LE RLD IVYR    PTI ++RQ +NH H
Sbjct: 61  NFA-ISEKQLFNYVKKAIKLKGSSGENLLVALEMRLDNIVYRLGLAPTIISSRQLINHGH 119

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVAT 178
           + V+G+ VNI S++CK  + I++K        + +  +L ++    P ++  N   + A 
Sbjct: 120 IYVDGKVVNIPSFKCKPTNNIKIKDNLVSKRIIEKNIELLDKYFRAPSHLYFNKKKLEAK 179

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + +          +I+   L++EFYSR
Sbjct: 180 VINMVKR---EDIKLIINELLIIEFYSR 204


>gi|108861068|gb|ABG21406.1| ribosomal protein small subunit 4 [Marsilea capensis]
          Length = 200

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKILRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|33413173|emb|CAD86722.1| ribosomal protein small subunit 4 [Schistidium papillosum]
          Length = 182

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 72  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 180


>gi|293634013|gb|ADE60386.1| ribosomal protein subunit 4 [Oligotrichum canaliculatum]
          Length = 180

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 17  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 75

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D I +K + +  A +      ++
Sbjct: 76  RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDRQESQAIIARNIDFSQ 135

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 136 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|108861060|gb|ABG21402.1| ribosomal protein small subunit 4 [Marsilea aegyptiaca]
 gi|108861066|gb|ABG21405.1| ribosomal protein small subunit 4 [Marsilea botryocarpa]
 gi|108861076|gb|ABG21410.1| ribosomal protein small subunit 4 [Marsilea distorta]
 gi|108861086|gb|ABG21415.1| ribosomal protein small subunit 4 [Marsilea macrocarpa]
 gi|108861088|gb|ABG21416.1| ribosomal protein small subunit 4 [Marsilea macropoda]
 gi|108861096|gb|ABG21420.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|108861106|gb|ABG21425.1| ribosomal protein small subunit 4 [Marsilea nubica var. gymnocarpa]
 gi|108861116|gb|ABG21430.1| ribosomal protein small subunit 4 [Marsilea vera]
          Length = 200

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|293611988|gb|ADE48438.1| ribosomal protein 4 [Dioon rzedowskii]
          Length = 174

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 7   NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 65

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + +  A + +  
Sbjct: 66  NTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIEKNL 125

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 126 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 172


>gi|125662688|gb|ABN50294.1| small ribosomal protein 4 [Cedrus atlantica]
          Length = 185

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P     Y      +    K S + ++   KQK++ +YG ++E++     + 
Sbjct: 1   ALPGLTSKRP----KYRNDSINRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKYVRI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A R++G T   L+  LE RLD I++R    PTI  ARQ VNH H+ VN   V+I SY CK
Sbjct: 56  ARRAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSYPCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             DVI ++ + +  + + +   L +RD +P +++ N         +I  S       + +
Sbjct: 116 PQDVITIRDQQRLRSIIKKNIDLFQRDKLPNHLTFNSLQYKGFINQIIDSK---WISLKI 172

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 173 NELLVVEYYSR 183


>gi|184127957|gb|ACC67878.1| ribosomal protein small subunit 4 [Marattia salicina]
          Length = 190

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +     K K S + ++L AKQ+++  YG ++E++     + A
Sbjct: 1   DLPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 59  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++     V +  +   +D +PE+++ +    +       RI +        +
Sbjct: 119 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 NINELLVVEYYSR 188


>gi|108861108|gb|ABG21426.1| ribosomal protein small subunit 4 [Marsilea oligospora]
          Length = 200

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I ++ +      +      + R  ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|89112935|gb|ABD61086.1| ribosomal protein subunit 4 [Schistidium apocarpum]
 gi|89112937|gb|ABD61087.1| ribosomal protein subunit 4 [Schistidium trichodon]
          Length = 172

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSSKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|52788789|gb|AAU87375.1| ribosomal protein small subunit 4 [Calochlaena villosa]
 gi|99639944|emb|CAJ45115.1| putative ribosomal protein S4 gene [Calochlaena villosa]
          Length = 200

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+     +         RK   S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKNLPGLTGKASNPRETRVTTDQSASRK--ISQFCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH++VN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRI 182
           V++ SYRCK  D+I ++ +      +      + R  D+P++++      +       RI
Sbjct: 118 VDVPSYRCKPKDIITIRNRPTSYNGLKSGINESSRGGDIPDHLTFSLLEGNRPKGLVNRI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 178 ---ANRESIDLNINELLVVEYYSR 198


>gi|77019211|emb|CAH60210.1| chloroplast 30S ribosomal protein S4 [Grimmia unicolor]
          Length = 176

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 7   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 66  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAIIIK 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 126 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 174


>gi|89112945|gb|ABD61091.1| ribosomal protein subunit 4 [Grimmia plagiopodia]
          Length = 172

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDQESIGLKINELLVVEYYSR 170


>gi|17154617|emb|CAC83921.1| ribosomal protein S4 [Orthrosanthus chimboracensis]
          Length = 182

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +  +       ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIENSIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|3914856|sp|O20254|RR4_LIBFO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292919|emb|CAA92543.1| ribosomal protein S4 [Libertia formosa]
          Length = 182

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +  +       ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|52783270|sp|Q6H9K5|RR4_EQUSC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48927213|emb|CAE47542.1| small ribosomal protein 4 [Equisetum scirpoides]
          Length = 207

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + +I  R   NL G     V ++        Q  + K S + ++L AKQ+++ 
Sbjct: 1   MSRYRGPRLRII-RRLRNLPGLTNKLVESKKNKVSGSDQSIQKKVSQYCIRLEAKQRLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ++E++  +  + A  ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH
Sbjct: 60  NYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRH 118

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMV 176
           +LVN R V++ S+ CK  D+I +       + + +  +  A+  VPE++++         
Sbjct: 119 ILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRIESFAKDQVPEHLTLSLSEPKKPK 178

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                + +        + +   LVVE+YSR
Sbjct: 179 GLVNYLINR---ESIGLTINELLVVEYYSR 205


>gi|37683560|gb|AAQ98831.1| small ribosomal protein 4 [Pogonatum procerum]
          Length = 173

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L+ KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 10  NKKISQYRIRLKEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 68

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + +  A + +    ++
Sbjct: 69  RLGMAPTIPGARQLVNHKHILVNDDIVNIPSYRCKPQDFITIKNRQESQAIIAKNIDFSQ 128

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 129 KYKIPNHLTFSSLEKKGLVNQI---LDRESIDLKINELLVVEYYSR 171


>gi|33413165|emb|CAD86719.1| ribosomal protein small subunit 4 [Grimmia mollis]
          Length = 176

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 7   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 66  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRVVNIPSYRCKPQDFITIKDRQKSQAMIIK 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 126 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 174


>gi|12330486|gb|AAG52780.1| ribosomal protein 4 [Voitia hyperborea]
          Length = 188

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 8/190 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 2   GALPGLTNKTPQLKSSST---NQSXANKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 57

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++R    PTI  ARQ +NHRH+LVN R V+I SYRC
Sbjct: 58  TARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLINHRHILVNDRIVDIPSYRC 117

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A + +  +   +  +P +++ N         +I   L      + 
Sbjct: 118 KPQDFITIKDRQKSQAIISKNIEFFXKYKIPNHLTYNFLKKQGLVNQI---LDCESIGLK 174

Query: 195 MQPNLVVEFY 204
           +   LVVE+Y
Sbjct: 175 INELLVVEYY 184


>gi|162415074|gb|ABX89111.1| ribosomal protein S4 [Syntrichia caninervis var. spuria]
 gi|162415100|gb|ABX89124.1| ribosomal protein S4 [Didymodon fallax]
 gi|162415110|gb|ABX89129.1| ribosomal protein S4 [Barbula coreensis]
          Length = 186

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 25  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 83

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +  + K    + +    +++ 
Sbjct: 84  GMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 143

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 144 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 184


>gi|47606948|gb|AAT36394.1| ribosomal protein subunit 4 [Schistostega pennata]
          Length = 185

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G        RS            K S + ++L  KQK++ +YG  +E++  +  + A +
Sbjct: 2   PGLTNKIPQLRSNSINQ--STSNKKISQYRIRLEEKQKLRXHYGX-TERQLLNYVRXARK 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K   K  A +++    + +  VP +++ N         +I   L      + +   
Sbjct: 119 FITIKDXQKSHAMIMKNVDFSRKAKVPNHLTFNSLEKNGLVNQI---LDQESIGLKINEL 175

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 176 LVVEYYSR 183


>gi|293611982|gb|ADE48435.1| ribosomal protein 4 [Dioon edule]
 gi|293611984|gb|ADE48436.1| ribosomal protein 4 [Dioon mejiae]
          Length = 181

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P  +R+        R+    S + ++L  KQK++ +YG ++E++     + A R+
Sbjct: 1   LTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE R D  ++R+   PTI  ARQ VNHRH+LVN R V+I SYRCK  DV
Sbjct: 56  KGSTGQVLLQLLEMRSDNTIFRSGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 115

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I V+ + +  A + +   L+++D +P +++++         +I  S       + +   L
Sbjct: 116 ITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELL 172

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 173 VVEYYSR 179


>gi|289599868|gb|ADD12885.1| ribosomal protein S4 [Davilla cf. kunthii Zartman s.n.]
          Length = 166

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
            R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 1   SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNI 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVN R VNI SYRCK  D+I VK + K  A +      
Sbjct: 60  LFRLGMASTIPGARQLVNHRHILVNDRIVNIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 164


>gi|289599921|gb|ADD12911.1| ribosomal protein S4 [Hibbertia goyderi]
          Length = 165

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNH+H+LVN R V+I SYRCK  D+I VK + K  A +      +
Sbjct: 60  FRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNFLDSS 119

Query: 161 -ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + P+++++          +I  S       + +   LVVE+YSR
Sbjct: 120 LHDEFPKHLTLQPFQYKGLVNQIIDSK---WIGLQINELLVVEYYSR 163


>gi|89112941|gb|ABD61089.1| ribosomal protein subunit 4 [Grimmia calyptrata]
 gi|89112949|gb|ABD61093.1| ribosomal protein subunit 4 [Grimmia ovalis]
 gi|89112951|gb|ABD61094.1| ribosomal protein subunit 4 [Grimmia anodon]
          Length = 172

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|125662730|gb|ABN50315.1| small ribosomal protein 4 [Ephedra torreyana]
          Length = 203

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 14/209 (6%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYY 62
                 KI RR+        K P   +     +H   R   K S + + L+ KQK++ +Y
Sbjct: 1   YRGPLFKIIRRLKTLPGLTSKRPKYKKR----VHRSFRPWWKKSQYLVCLQEKQKIRFHY 56

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G + E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+L
Sbjct: 57  G-LPERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHIL 115

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVA 177
           VN   V+I SYRCK  D+I +K K  +   +       +       VP Y++ N      
Sbjct: 116 VNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKG 175

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +I  +       + ++  LV+E+YSR
Sbjct: 176 IVNKIIDTKD---LQLKIKEMLVIEYYSR 201


>gi|3098176|gb|AAC15536.1| small ribosomal protein 4 [Cinclidium stygium]
          Length = 187

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I
Sbjct: 17  TSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNI 75

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K    + +   L
Sbjct: 76  IFRLGMASTIPGARQLVNHRHILVNDRLVDIPSYRCKPQDFITIKDRQKSQTIISKNIDL 135

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++  +P +++ N  N      +I   L      + +   LVVE+YSR
Sbjct: 136 YQKSKIPNHLTYNSLNKKGLVNQI---LDRESIDLKINELLVVEYYSR 180


>gi|293611966|gb|ADE48427.1| ribosomal protein 4 [Cycas clivicola]
 gi|293611968|gb|ADE48428.1| ribosomal protein 4 [Cycas guizhouensis]
 gi|293611970|gb|ADE48429.1| ribosomal protein 4 [Cycas hainanensis]
 gi|293611974|gb|ADE48431.1| ribosomal protein 4 [Cycas panzhihuaensis]
 gi|293611976|gb|ADE48432.1| ribosomal protein 4 [Cycas siamensis]
          Length = 183

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G       +R+        R+    S + ++   KQK++ +YG ++E++     + A R
Sbjct: 1   PGLTNKRPKSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 57  AKGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI ++ + +  A + +   L+++D +P +++++         +I  S       + +   
Sbjct: 117 VITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK---WISLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|33413241|emb|CAD86755.1| ribosomal protein small subunit 4 [Pleurochaete squarrosa]
          Length = 183

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 22  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 80

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYR K  D I +K + K    + +    +++ 
Sbjct: 81  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRFKPQDFITIKDRQKSQVMITKNVDFSQKS 140

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 141 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 181


>gi|14090502|gb|AAK53536.1| small ribosomal protein 4 [Dicranodontium pulchroalare]
          Length = 183

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+    +S            K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTXSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 58  KGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K    V +  + +++  VP +++ N         +I   L      + +   L
Sbjct: 118 ITIKNRQKSQFIVAKNIEFSQKYKVPNHLTFNSLEKKGLVNQI---LNKESIGLKINELL 174

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 175 VVEYYSR 181


>gi|289599951|gb|ADD12926.1| ribosomal protein S4 [Tetracera masuiana]
          Length = 166

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
            R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 1   SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNI 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      
Sbjct: 60  LFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SPHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 164


>gi|162415078|gb|ABX89113.1| ribosomal protein S4 [Syntrichia bidentata]
          Length = 186

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 25  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 83

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +  + K    + +    +++ 
Sbjct: 84  GMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 143

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 144 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 184


>gi|37683570|gb|AAQ98836.1| small ribosomal protein 4 [Pogonatum neocaledonicum]
          Length = 185

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S         +K   +   ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTSQLKSGYINQTVSNKKISQN--RIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R     TI  ARQ VNH+H+LVNG  VNI SYRCK  
Sbjct: 58  KAKGSTGQILLQLLEMRLDNIIFRLGMALTIPEARQLVNHKHILVNGHIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +    + +    +++  +P +++    +      +I   L      + +  
Sbjct: 118 DFITIKNRQESQNLIAKNIDFSQKYKIPNHLTFKSLDKKGLINQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|7576755|gb|AAF63974.1| small ribosomal protein 4 [Bartramiopsis lescurii]
          Length = 182

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++     + A  ++G T   L+  LE RLD I++
Sbjct: 19  NKKISQYRIRLEKKQKLRFHYG-ITERQLLKYVRIARGAKGSTGXILLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D I +K + K  A + + ++ + 
Sbjct: 78  RLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDFITIKDQQKSQAIIAKNNEFSH 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P ++++N         +I   L      + +   LVVE+YSR
Sbjct: 138 KYKIPNHLTLNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 180


>gi|89112957|gb|ABD61097.1| ribosomal protein subunit 4 [Grimmia incurva]
 gi|89112963|gb|ABD61100.1| ribosomal protein subunit 4 [Grimmia funalis]
          Length = 172

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|162415120|gb|ABX89134.1| ribosomal protein S4 [Didymodon johansenii]
          Length = 188

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYR
Sbjct: 57  RVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNGIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +  + K    + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNSLEKKGLINQI---LDQKSIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|108861064|gb|ABG21404.1| ribosomal protein small subunit 4 [Marsilea angustifolia]
 gi|108861078|gb|ABG21411.1| ribosomal protein small subunit 4 [Marsilea drummondii]
          Length = 200

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|77019189|emb|CAH60200.1| chloroplast 30S ribosomal protein S4 [Grimmia muehlenbeckii]
          Length = 174

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 5   INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 63

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  + +++
Sbjct: 64  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSKSIIIK 123

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 124 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 172


>gi|89112965|gb|ABD61101.1| ribosomal protein subunit 4 [Crossidium davidai]
          Length = 172

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 6   STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +  + K    + +   
Sbjct: 65  VIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMITKNVD 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 125 FYQKSKIPNHLTFNSLEKKGLINQI---LDQESIGLNINELLVVEYYSR 170


>gi|74273169|gb|ABA01284.1| ribosomal protein S4 [Passiflora tulae]
          Length = 183

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GAFPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     + ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPQNNLPTHLILYPKKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|3914839|sp|O19990|RR4_BELCH RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292742|emb|CAA92533.1| ribosomal protein S4 [Belamcanda chinensis]
          Length = 182

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  
Sbjct: 56  RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGHI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +     L+   ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIALSPHEELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|74273167|gb|ABA01283.1| ribosomal protein S4 [Passiflora murucuja]
          Length = 183

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRLGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|289599858|gb|ADD12880.1| ribosomal protein S4 [Davilla elliptica]
          Length = 165

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R VNI SYRCK  D+I VK + K  A +      +
Sbjct: 60  FRLGMASTIPGARQLVNHRHILVNDRIVNIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119

Query: 161 -ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PDEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 163


>gi|74273127|gb|ABA01263.1| ribosomal protein S4 [Passiflora ornithoura]
          Length = 183

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++      + +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRKKLPTHLILYPQKYKGLVTQIIDSK---WVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|3914859|sp|O20265|RR4_NERBO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292972|emb|CAA92550.1| ribosomal protein S4 [Nerine bowdenii]
          Length = 182

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L    R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLQNPLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLRYVHIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNFIASSPHEELPNHLTIDSFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|293612002|gb|ADE48445.1| ribosomal protein 4 [Encephalartos umbeluziensis]
          Length = 171

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 4   NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 62

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + K  A + +  
Sbjct: 63  NTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNI 122

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 123 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 169


>gi|59803305|gb|AAX07761.1| Rps4 [Moerckia flotoviana]
          Length = 184

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K + + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE RLD 
Sbjct: 18  STAXRKITXYRIRLEEKQKLRFHYG-LTERQLLKYVRIARRAKGSTGQILLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+R    PTI  ARQ VNHRH+++N  +V+I SY CK  DVI ++ + +  + +     
Sbjct: 77  IVFRLGMAPTIPGARQLVNHRHIVINDGTVDIPSYSCKPRDVITIRDRKESRSIIARNMD 136

Query: 159 LAERDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +R V P +++++  +   +  ++          + +   L+VE+YSR
Sbjct: 137 IYQRRVIPNHLTLDSTHFRGSINQVIDR---EWIDLEINELLIVEYYSR 182


>gi|46810990|gb|AAT01813.1| small ribosomal protein 4 [Austrofossombronia australis]
          Length = 181

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++
Sbjct: 18  NKKMSQYRIRLEEKQKLRFHYG-LTERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIIF 76

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LV+  +VNI SY CK GDVI V+ + K  + + ++  L +
Sbjct: 77  RLGMAPTIPGARQLVNHKHILVDDDTVNIPSYSCKPGDVITVRNRQKSQSIIAKSIILFQ 136

Query: 162 RDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   P +++++   +  +  +           + +   LVVE+YSR
Sbjct: 137 KPKAPNHLTLDSTRLRGSINQTIDRD---WINLKINELLVVEYYSR 179


>gi|77019169|emb|CAH60190.1| chloroplast 30S ribosomal protein S4 [Grimmia funalis]
          Length = 180

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 70  LDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 130 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 178


>gi|255116228|gb|ACU01166.1| small ribosomal protein subunit 4 [Pterobryopsis orientalis]
          Length = 187

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 3   LPGLTNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY+CK  
Sbjct: 60  KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYQCKPQ 119

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K K K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 120 DFITIKNKRKSETIISKNIEFDQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|157689580|gb|ABV65346.1| ribosomal protein S4 [Urtica urens]
          Length = 182

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 9/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P      G     Q R  K S + ++L  KQK++ +YG ++E++       A +
Sbjct: 1   GLTTKKP----RTGNDFRNQLRPGKKSQYRIRLEEKQKLRFHYG-LTEQQLLKYVHIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I SYRCK  D
Sbjct: 56  AKGSTGQVLLQLLEMRLDNILFRLGLTSTIPQARQLVNHRHILVNGGIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I V+ K K  + V +    + R ++P+++++       +   I   L      + +   
Sbjct: 116 IIIVRDKQKSKSLVQKYIDSSSREELPKHLTLYPFQYKGSVNEI---LDSKWVGLKINEL 172

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 173 LVVEYYSR 180


>gi|14090428|gb|AAK53499.1| small ribosomal protein 4 [Syrrhopodon gardneri]
          Length = 182

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  + +   P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NTNFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|74273139|gb|ABA01269.1| ribosomal protein S4 [Passiflora talamancensis]
          Length = 183

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|293611972|gb|ADE48430.1| ribosomal protein 4 [Cycas micronesica]
          Length = 182

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G       +R+        R+    S + ++   KQK++ +YG ++E++     + A R+
Sbjct: 1   GLTNKRPKSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGRA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  DV
Sbjct: 57  KGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 116

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I ++ + +  A + +   L+++D +P +++++         +I          + +   L
Sbjct: 117 ITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDRK---WISLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|14090488|gb|AAK53529.1| small ribosomal protein 4 [Syrrhopodon incompletus]
          Length = 182

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQPTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKAKGSTGQILLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NVNFSPKYKIPSHLTFNSVEKKGLVNQI---LDHESIGLKINELLVVEYYSR 180


>gi|293611956|gb|ADE48422.1| ribosomal protein 4 [Bowenia serrulata]
          Length = 181

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P  +R+        R+    S + ++L  KQK++ +YG ++E++     + A R+
Sbjct: 1   LTNKRP-KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLQYVRIAGRA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE R D  ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  DV
Sbjct: 56  KGSTGQVLLQLLEMRSDNTIFRLGMASTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 115

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I V+ + +  A + +   L+++D +P +++++         +I  S       + +   L
Sbjct: 116 ITVRDQQRSRAMIEKNLDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELL 172

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 173 VVEYYSR 179


>gi|289523341|ref|ZP_06440195.1| ribosomal protein S4 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503033|gb|EFD24197.1| ribosomal protein S4 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 140

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 4/143 (2%)

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++F   F++A R  G   HN +  LE R+D++VYR     +   ARQ V H H+ VN
Sbjct: 1   MTERQFERFFEKASRMAGQKGHNFLQLLERRVDSVVYRLGIASSRAQARQLVTHGHITVN 60

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIP 183
           G+ ++I S   K GDVI V   S+ + ++ E  ++A  R +PE++ +N + M    V +P
Sbjct: 61  GKKLDIPSALVKVGDVIAVAPNSRDIPTIRENLEVASARAIPEWLELNAERMEGRVVSLP 120

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
           +  +     V +   L+VE+Y+R
Sbjct: 121 TREQ---IDVPVNEQLIVEYYAR 140


>gi|162415096|gb|ABX89122.1| ribosomal protein S4 [Barbula indica]
          Length = 189

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
                    K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 2   FRTLPGLSNKTPHLKSSS---PNQSSSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 58  RIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +    +++  +P +++ N         +I   L      +
Sbjct: 118 CKPQDFITIKDRQKSQVMITKNLDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESLGL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|66990656|emb|CAI29106.1| small ribosomal protein 4 [Plagiochila sp. Solga & Fischer s.n.]
          Length = 181

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 5/183 (2%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N
Sbjct: 57  LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISIN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SY C+ GD   +  K K  A V +     ++  +P +++ +   +  +  ++ 
Sbjct: 117 NDIVDIPSYTCEPGDNNTIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMI 176

Query: 184 SSL 186
           +  
Sbjct: 177 NRE 179


>gi|16565380|gb|AAL26205.1|AF313604_1 small ribosomal protein 4 [Marattia werneri]
          Length = 193

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           NL G     + ++     +     K K S   ++L AKQ+++  YG ++E++     + A
Sbjct: 4   NLPGLTNKTLKSKKAQIAIDQPASK-KISQXCIRLEAKQRLRFNYG-LTERQLLKYVRIA 61

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 62  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 121

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++     V +  +   +D +PE+++++    +       RI +        +
Sbjct: 122 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 178

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 179 NINELLVVEYYSR 191


>gi|63191847|gb|AAY34883.1| small ribosomal protein subunit 4 [Gymnostomum aeruginosum]
          Length = 191

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 30  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 88

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K    + +    +++ 
Sbjct: 89  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFSQKY 148

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 149 KIPNHLTFNSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 189


>gi|329907623|ref|ZP_08274693.1| SSU ribosomal protein S4p (S9e) [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546928|gb|EGF31837.1| SSU ribosomal protein S4p (S9e) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 139

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 4/141 (2%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++FR  F EADR +G+T   L+  LE RLD ++YR  F  T   ARQ V+H+   VNG 
Sbjct: 2   ERQFRRYFAEADRRKGNTGETLLKLLEGRLDNVIYRMGFGSTRAEARQLVSHKAFTVNGI 61

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            VNI SY+ K GDVI V++K+K+   ++EA  LAE+  +P +++V+   M  TF  +P  
Sbjct: 62  VVNIASYQVKAGDVIVVREKAKKQVRIVEALSLAEQIGMPSWVAVDAKKMEGTFKSVPDR 121

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
            +       +  +L+VE YSR
Sbjct: 122 SE---IAHDVNESLIVELYSR 139


>gi|293611996|gb|ADE48442.1| ribosomal protein 4 [Encephalartos gratus]
          Length = 172

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 5   NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 63

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + K  A + +  
Sbjct: 64  NTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNI 123

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 124 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 170


>gi|162415136|gb|ABX89142.1| ribosomal protein S4 [Didymodon rivicola]
          Length = 188

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLSNKIPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 57  RVARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +  + K    + +    +++  +P +++ N         +I   L      +
Sbjct: 117 CKPQDFITINDRKKSQIIITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQKSIGL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|157689488|gb|ABV65300.1| ribosomal protein S4 [Hirtella bicornis]
          Length = 172

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           L  Q R  K S + ++L  KQK++ +YG ++E++       A +++G T   L+  +E R
Sbjct: 3   LRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVCIAAKAKGSTGQVLLQLIEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I VK + K  A +  
Sbjct: 62  LDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRCKPRDIITVKDEQKSRAMIQN 121

Query: 156 AS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                A+ ++P++++           +I  S       + +   L VE+YSR
Sbjct: 122 HLDSSAQEELPKHLTFQPFQHKGLVNQIIDSK---WIGLKINELLXVEYYSR 170


>gi|67035578|gb|AAY62720.1| small ribosomal protein subunit 4 [Glyphomitrium daviesii]
          Length = 153

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 5/155 (3%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  A
Sbjct: 1   EEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGA 59

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171
           RQ VNH+H+LVN   VNI SYRCK  D I +K + K  A +++    +E+  VP +++ N
Sbjct: 60  RQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVDFSEKTKVPNHLTFN 119

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I   L      + +   LVVE+YSR
Sbjct: 120 SLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 151


>gi|89112961|gb|ABD61099.1| ribosomal protein subunit 4 [Dryptodon trichophyllus]
          Length = 172

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++
Sbjct: 9   NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIF 67

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I VK + K  + +++    ++
Sbjct: 68  RLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITVKDRQKSKSIIIKNMDFSQ 127

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 128 KYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|14090500|gb|AAK53535.1| small ribosomal protein 4 [Brothera leana]
          Length = 183

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+    +S            K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTXSQLKSNSITQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 58  KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K    V +  +L+++  VP +++ N         +I   L      + +   L
Sbjct: 118 ITIKNRQKSQFIVAKNIELSQKYKVPNHLTFNSLEKKGLVNQI---LNKESIGLKINELL 174

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 175 VVEYYSR 181


>gi|89112915|gb|ABD61076.1| ribosomal protein subunit 4 [Ptychomitrium formosicum]
          Length = 172

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ +NH+H+LVN R VNI SYRCK  D I +K + K  A V++
Sbjct: 62  LDNVIFRLSMAPTIPGARQLINHKHILVNNRIVNIPSYRCKPQDFITIKARQKSQAMVIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NIDFSQKHKVPNHLTFNSLEKKGLVNQI---LDHGSIGLKINELLVVEYYSR 170


>gi|77019167|emb|CAH60189.1| chloroplast 30S ribosomal protein S4 [Grimmia elongata]
          Length = 181

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 12  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 70

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 71  LDNIIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSQAMIIK 130

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 131 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 179


>gi|32892120|gb|AAP88999.1| ribosomal protein S4 [Passiflora citrifolia]
          Length = 183

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP+   ++        R  + S + ++ + KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTRKSPIAGSAF-------SRPGRKSQYCIRFQEKQKLRLHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++  T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 53  IAAKAKERTGKVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    +  +     ++ +P+++++           I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIQNSLDSFRQEQLPKHLTLRRFQYKGLVNEIIDSK---WVGLE 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|17154475|emb|CAC83914.1| ribosomal protein S4 [Cipura campanulata]
          Length = 182

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +    +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|162415094|gb|ABX89121.1| ribosomal protein S4 [Barbula convoluta]
          Length = 189

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
                    K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 2   FRTLPGLSNKTPHLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYR
Sbjct: 58  RIARKAKGSTGLILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  + +++   P +++ N         +I   L      +
Sbjct: 118 CKPQDFITIKDRQKSQLMITKNVEFSQKSKTPNHLTFNSLEKKGLVNQI---LAQESIGL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|146261557|gb|ABQ15088.1| ribosomal protein S4 [Crassula aff. perforata Fishbein 3778]
          Length = 169

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 5/171 (2%)

Query: 37  HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96
             Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RL
Sbjct: 1   RNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRL 59

Query: 97  DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156
           D I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  K   K  A +   
Sbjct: 60  DNILFRLSMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPSDIITAKDDKKSRALIQNY 119

Query: 157 SQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 LDSTPHEELPKHLTLHSVQYKGLVNQIIDSK---GVGLKINELLVVEYYSR 167


>gi|14090438|gb|AAK53504.1| small ribosomal protein 4 [Syrrhopodon fimbriatulus]
          Length = 182

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   +NI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNHIINIPSYQCKPQDFITIKDQQKHQTMIVK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NINFSPKHKIPNHLTFNSVEKKGLVNQI---LDQEAIGLKINELLVVEYYSR 180


>gi|77019209|emb|CAH60209.1| chloroplast 30S ribosomal protein S4 [Dryptodon trichophyllus]
          Length = 176

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++
Sbjct: 13  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIF 71

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I VK + K  + +++    ++
Sbjct: 72  RLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITVKDRQKSKSIIIKNMDFSQ 131

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 KYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 174


>gi|255116236|gb|ACU01170.1| small ribosomal protein subunit 4 [Calyptothecium hookeri]
          Length = 186

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY+CK  
Sbjct: 59  KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYQCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|33413203|emb|CAD86737.1| ribosomal protein small subunit 4 [Leucobryum glaucum]
          Length = 180

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 14  STSNKKISQYRIRLEKKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K  + V +  +
Sbjct: 73  ILFRLGMAPTIPGARQLVNHRHILVNDYIVNIPSYRCKPQDFISIKNRQKSQSIVAKNIE 132

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 133 FSQKYKVPNHLTFNSLEKKGLVNQI---LNHESIGLKINELLVVEYYSR 178


>gi|89112953|gb|ABD61095.1| ribosomal protein subunit 4 [Grimmia crinita]
          Length = 172

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 62  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKNRQKSQAMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|63191831|gb|AAY34875.1| small ribosomal protein subunit 4 [Chenia leptophylla]
          Length = 183

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 22  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 80

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +  + K    + +    +++ 
Sbjct: 81  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 140

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 141 KIPNHLTFNSLEKKGLINQI---LDQESIGLEINELLVVEYYSR 181


>gi|37992659|gb|AAR06508.1| small ribosomal protein 4 [Pseudospiridentopsis horrida]
          Length = 186

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 119 DFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|108861098|gb|ABG21421.1| ribosomal protein small subunit 4 [Marsilea mutica]
          Length = 198

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 11/202 (5%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K+ RR+        K+P    S       Q    K S F ++L AKQ+++  YG ++E++
Sbjct: 1   KMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTERQ 57

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V+
Sbjct: 58  LLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVD 117

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPS 184
           + SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++  
Sbjct: 118 VPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPKGVVNQV-- 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
             K     + +   L+VE+YSR
Sbjct: 176 -AKRESMDLNINELLIVEYYSR 196


>gi|16565393|gb|AAL26211.1|AF313611_1 small ribosomal protein 4 [Ginkgo biloba]
          Length = 185

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G     +    K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----KSGNDPINRSSSGKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE R D I++R+    TI  ARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 56  RKAKGSTGQVLLQLLEMRSDNIIFRSGMALTIPGARQLVNHRHLLVNDRVVDIPSYRCKP 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            DVI ++ + +  A +     L++RD  P +++++         RI  S       + + 
Sbjct: 116 QDVITIRDQQRSRAIIKNNINLSQRDKMPNHLTLHSSQYKGLVNRIIDSK---WINLKIN 172

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 173 ELLVVEYYSR 182


>gi|3914851|sp|O20230|RR4_HYMLI RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292886|emb|CAA92549.1| ribosomal protein S4 [Hymenocallis littoralis]
          Length = 182

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L    R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGFTSKRP----RSGSDLKNPLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLRYVQIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +  +   A R ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASAPREELPNHLTIDSFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|6002085|emb|CAA58952.1| ribosomal protein S4 [Taxus baccata]
          Length = 202

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI  R+        K P   R   P      +  KPS + ++L+ KQ+++ 
Sbjct: 1   MSRYRGPRLKIINRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A RS+G T   L+  LE RLD I++R     TI  ARQ V+HRH
Sbjct: 59  HYG-LTERQLLQYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--M 175
           +LVN R V+I SYRCK  D+I +K + + +  +     L++RD   VP ++++       
Sbjct: 118 ILVNDRIVDIPSYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQY 177

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEF 203
           +    +I  S +     + +   LVVE+
Sbjct: 178 IGLVKKIIDSKR---ISLKINELLVVEY 202


>gi|12330552|gb|AAG52813.1| ribosomal protein 4 [Calomnion complanatum]
          Length = 185

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK + +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKTPQLKSSSINQ--STSNKKISQYRIRLEEKQKSRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 58  KAKGSTGEVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +     ++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDRQKYQTIISKNIDFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|3914854|sp|O20235|RR4_IRILU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292911|emb|CAA92540.1| ribosomal protein S4 [Iris lutescens]
          Length = 182

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|62766389|gb|AAX99324.1| rpS4 [Botrychium simplex]
          Length = 191

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G +     K+P  ++  G      R+    S + ++L AKQ+++  YG ++E++     
Sbjct: 2   LGNSPGLTNKTP-KSKKIGSDQPISRK---ISQYCIRLEAKQRLRFNYG-LTERQLLKHV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A R+RG T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY 
Sbjct: 57  RIARRARGSTGQVSLQSLEMRLDNILFRLGMSPTIPGARQLVNHRHILVNDRVVDIPSYH 116

Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVP 190
           C+  DVI  +        +        E  +P ++S+     +       RI        
Sbjct: 117 CEPNDVITARDWKNSRDLIGGNVGSSGEGGIPNHLSLSLSEDEKPKGFVNRIIDR---ES 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IGLKINELLVVEYYSR 189


>gi|157689484|gb|ABV65298.1| ribosomal protein S4 [Helianthemum grandiflorum]
          Length = 176

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 12/185 (6%)

Query: 23  PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82
            K+P   ++       Q    K S + ++L  KQK++ +YG ++E++     + A +++G
Sbjct: 1   SKTPKAKKN-------QFHPGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKG 52

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
            T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SY CK GD+I 
Sbjct: 53  STGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYGCKPGDIIS 112

Query: 143 VKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201
           V+ + K    +      +  + VP++++V          +I +        + +   LVV
Sbjct: 113 VRAEQKSKTLIQNYLDSSIPKKVPKHLTVRTLQYKGLVNQIINRK---SVGLQINELLVV 169

Query: 202 EFYSR 206
           E+YSR
Sbjct: 170 EYYSR 174


>gi|108861070|gb|ABG21407.1| ribosomal protein small subunit 4 [Marsilea crenata]
 gi|108861072|gb|ABG21408.1| ribosomal protein small subunit 4 [Marsilea crenata]
 gi|108861092|gb|ABG21418.1| ribosomal protein small subunit 4 [Marsilea minuta]
          Length = 200

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E
Sbjct: 1   RLKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRC+  D I V+ +      +      + R  ++P+++S   +  +       ++
Sbjct: 118 VDVPSYRCEPQDNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
               K     + +   L+VE+YSR
Sbjct: 178 ---AKRESMDLNINELLIVEYYSR 198


>gi|283824462|gb|ADB43047.1| small ribosomal protein 4 [Cyanolophocolea echinella]
          Length = 158

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 5/160 (3%)

Query: 48  FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107
           + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R D  ++R     
Sbjct: 1   YRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQILLQLLEMRPDNTIFRLGMSS 59

Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPE 166
           TI  ARQ VNHRH+ +N   V+I SY C+ GD I +K K K  + + +   L ++  +P 
Sbjct: 60  TIPEARQLVNHRHISINNDIVDIPSYNCEPGDTITIKNKQKSQSVITKNINLFQKLKIPS 119

Query: 167 YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++ +   +  +  ++ +        + +   LVVE+YSR
Sbjct: 120 HLTFDSIKLRGSVNQMINR---EWVNLKINELLVVEYYSR 156


>gi|293611990|gb|ADE48439.1| ribosomal protein 4 [Dioon spinulosum]
          Length = 173

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 96/170 (56%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 6   NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 64

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R+   PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + +  A + +  
Sbjct: 65  NTIFRSGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQRSRAMIEKNL 124

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 125 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 171


>gi|218157223|gb|ACK58428.1| ribosomal protein subunit 4 [Polytrichadelphus magellanicus]
          Length = 180

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 17  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 75

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN R +NI SYRCK  D I +K + +  A +      ++
Sbjct: 76  RLGMAPTIPGARQLVNHKHILVNDRIINIPSYRCKPQDFITIKDRQESQAIITRNIDFSQ 135

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 136 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|305672333|gb|ADM63590.1| ribosomal protein S4 [Dialypetalum sp. Koopman et al. s.n.]
          Length = 173

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KSP + +        Q    K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKSPKDRK----DRRNQSGSWKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  K   K    +  +   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTITAKDDGKSKVLIQNSLDSSPHEELPNHLTLDPVQYKGLVNQIIDS 172


>gi|184127963|gb|ACC67881.1| ribosomal protein small subunit 4 [Marattia sylvatica]
 gi|184127965|gb|ACC67882.1| ribosomal protein small subunit 4 [Marattia sylvatica]
          Length = 191

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     + ++     +     K K S + ++L AKQ+++  YG ++E++     + A
Sbjct: 2   DLPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIA 59

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 60  GKAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKP 119

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPV 193
            D+I V+ ++     V +  +   +D +PE+++++    +       RI +        +
Sbjct: 120 KDIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGL 176

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 177 NINELLVVEYYSR 189


>gi|254995569|emb|CAO82743.1| ribosomal protein S4 [Lycopodium annotinum]
          Length = 172

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 95/169 (56%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + +S+  A + + ++
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRAIIAKNNK 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++   +P +++++         +I          + +   LVVE+YSR
Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170


>gi|22854697|gb|AAN09768.1| small ribosomal protein 4 [Dicranoloma billarderi]
          Length = 182

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
            D +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I VK + K  A +++
Sbjct: 72  SDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITVKNRQKSQAMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ +         +I   L      + +   LVVE+YSR
Sbjct: 132 NIDFSQKYKVPNHLTFSSLEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|289599947|gb|ADD12924.1| ribosomal protein S4 [Tetracera billardierei]
 gi|289599949|gb|ADD12925.1| ribosomal protein S4 [Tetracera empedoclea]
 gi|289599961|gb|ADD12931.1| ribosomal protein S4 [Tetracera scandens]
 gi|289599963|gb|ADD12932.1| ribosomal protein S4 [Tetracera volubilis subsp. volubilis]
          Length = 165

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +
Sbjct: 60  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 163


>gi|17154626|emb|CAC83925.1| ribosomal protein S4 [Moraea sisyrinchium]
          Length = 182

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDPKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +        + ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPQEELPNHLTIDPIQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|27227933|gb|AAN85764.1| ribosomal protein subunit 4 [Anomobryum humillimum]
          Length = 186

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        ++         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKTPQLKTNSINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  
Sbjct: 59  KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPE 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +   L ++   P +++ N         +I   L      + +  
Sbjct: 119 DSITIKNRKKSQAIISKNLNLYQKYKTPNHLTYNFLKKKGLVNQI---LXRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|63191805|gb|AAY34862.1| small ribosomal protein subunit 4 [Cinclidotus aquaticus]
          Length = 195

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G      + +S         +K   S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 13  GLSNKIPHLKSSSTNQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKA 69

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D 
Sbjct: 70  KGSTGQILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDF 129

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +  + K    + +    +++  +P +++ N         +I   L      + +   L
Sbjct: 130 ITINDRQKSQVMITKNVDFSQKSKIPNHLTFNFLEKKGLINQI---LDQESIGLKINELL 186

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 187 VVEYYSR 193


>gi|62288933|sp|P69639|RR4_CRONU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288937|sp|P69643|RR4_GLACO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288941|sp|P69647|RR4_MICJU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292827|emb|CAA92535.1| ribosomal protein S4 [Crocus nudiflorus]
 gi|2292880|emb|CAA92539.1| ribosomal protein S4 [Gladiolus communis]
 gi|2292930|emb|CAA92544.1| ribosomal protein S4 [Micranthus junceus]
 gi|17154590|emb|CAC79545.1| ribosomal protein S4 [Micranthus junceus]
          Length = 183

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|17154605|emb|CAC83912.1| ribosomal protein S4 [Hesperoxiphion peruvianum]
          Length = 182

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P    S G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----STGSVLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +    +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|51860475|gb|AAU11374.1| ribosomal protein small subunit 4 [Gnetum leptostachyum]
          Length = 198

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+        K P   +         R   K S     L+ KQK++ ++G +
Sbjct: 1   GPRFKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R   +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLDLAGTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182
             VNI SY+CK  DVI +K K       +     ++  E  +P +++++         +I
Sbjct: 117 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQKKGIVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYS 205
                     + ++  LV+E+YS
Sbjct: 177 IDRKD---IQLNIKEMLVIEYYS 196


>gi|320455024|dbj|BAJ65659.1| small ribosomal protein 4 [Metzgeria duricosta]
 gi|320455030|dbj|BAJ65662.1| small ribosomal protein 4 [Metzgeria senjoana]
          Length = 188

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKLKSSY---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +    + +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWIDLKINELLVV 188


>gi|90970050|gb|ABE02794.1| ribosomal protein S4 [Passiflora auriculata]
          Length = 183

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP     +        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSDF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G     L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPAGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K GD+I VK + K    + ++     R+ +P ++ +          +I  S +     + 
Sbjct: 113 KPGDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSKR---VGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|33413161|emb|CAD86717.1| ribosomal protein small subunit 4 [Dryptodon patens]
          Length = 181

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 12  INQPTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 70

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  + +++
Sbjct: 71  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSKSMIIK 130

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 131 NMDFYQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 179


>gi|33413255|emb|CAD86762.1| ribosomal protein small subunit 4 [Cinclidotus fontinaloides]
          Length = 182

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +  + ++
Sbjct: 78  RLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRQKSQVMITKNVEFSQ 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 138 KSKIPNHLTFNFLEKKGLINQI---LDQESIGLKINELLVVEYYSR 180


>gi|3914860|sp|O20273|RR4_PATFR RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292980|emb|CAA92546.1| ribosomal protein S4 [Patersonia fragilis]
          Length = 184

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 11/192 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGNDLKNQLRSVKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A + +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKVKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIPS 184
           V+I SYRCK  D+I  K K +  A +      +   + ++P +++++         +I  
Sbjct: 116 VDIPSYRCKPQDIITTKDKQRSKALIQNYIASSTQPQEELPNHLTIDAFQYKGLVNQIID 175

Query: 185 SLKDVPYPVIMQ 196
           S       + + 
Sbjct: 176 SK---WIGLKIN 184


>gi|108861084|gb|ABG21414.1| ribosomal protein small subunit 4 [Marsilea gibba]
          Length = 199

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 11/203 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E+
Sbjct: 1   LKILRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V
Sbjct: 58  QLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIP 183
           ++ SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++ 
Sbjct: 118 DVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV- 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
              K     + +   L+VE+YSR
Sbjct: 177 --AKRESMDLNINELLIVEYYSR 197


>gi|67036054|gb|AAY62953.1| small ribosomal protein subunit 4 [Bryoandersonia illecebra]
          Length = 190

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 8   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 63

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 64  AKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQD 123

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K    + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 124 FITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINEL 180

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 181 LVVEYYSR 188


>gi|3914857|sp|O20255|RR4_LAPNE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292923|emb|CAA92542.1| ribosomal protein S4 [Lapeirousia neglecta]
          Length = 183

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPQQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|3914848|sp|O20215|RR4_FRESP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292870|emb|CAA92538.1| ribosomal protein S4 [Freesia sp. 'Lejeune 1997']
          Length = 183

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I    K +  A +      + R  ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPRQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|33411998|emb|CAD86773.1| ribosomal protein small subunit 4 [Bryobartramia novae-valesiae]
          Length = 178

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +V+R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K  A +++
Sbjct: 70  LDNVVFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQDFISIKNRQKSQAIIIK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP ++S +         +I   L      + +   LVVE+ SR
Sbjct: 130 NIDFSQKYKVPNHLSFDSLQKKGLVNQI---LDRESIGLKINELLVVEYDSR 178


>gi|51860493|gb|AAU11383.1| ribosomal protein small subunit 4 [Ephedra somalensis]
          Length = 200

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 12/205 (5%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + KI RR+        K P   +         R   K S + + L+ KQK++ +YG ++
Sbjct: 1   PRFKIIRRLKTLPGLTSKRPKYKKRV---QRSSRPWWKKSQYLVCLQEKQKIRFHYG-LT 56

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN  
Sbjct: 57  ERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHH 116

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVR 181
            V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         +
Sbjct: 117 IVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNK 176

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I  +       + ++  LV+E+YSR
Sbjct: 177 IIDTKD---LQLKIKEMLVIEYYSR 198


>gi|289599915|gb|ADD12908.1| ribosomal protein S4 [Hibbertia empetrifolia subsp. empetrifolia]
          Length = 165

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNH+H+LVN R V+I SYRCK  D+I VK + K  A +      +
Sbjct: 60  FRLGMASTIPGARQLVNHKHILVNDRIVDIPSYRCKPRDIITVKDEHKSRAMIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 163


>gi|37683546|gb|AAQ98824.1| small ribosomal protein 4 [Pogonatum tortile]
          Length = 174

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 11  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 69

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I  K + +  A + +    ++
Sbjct: 70  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITRKNRQESQAIIAKNIDFSQ 129

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 130 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 172


>gi|108861082|gb|ABG21413.1| ribosomal protein small subunit 4 [Marsilea farinosa]
 gi|108861102|gb|ABG21423.1| ribosomal protein small subunit 4 [Marsilea nashii]
 gi|108861122|gb|ABG21433.1| ribosomal protein small subunit 4 [Marsilea villosa]
          Length = 199

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 11/203 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E+
Sbjct: 1   LKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V
Sbjct: 58  QLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRIP 183
           ++ SYRC+  D+I V+ +      +           ++P+++S   +  +       ++ 
Sbjct: 118 DVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV- 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
              K     + +   L+VE+YSR
Sbjct: 177 --AKRESMDLNINELLIVEYYSR 197


>gi|17154706|emb|CAC79543.1| ribosomal protein S4 [Watsonia angusta]
          Length = 183

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  LQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|67035889|gb|AAY62871.1| small ribosomal protein subunit 4 [Platygyrium repens]
          Length = 186

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNXXPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P ++  +         +I          + +  
Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQIVDR---ESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|289599887|gb|ADD12894.1| ribosomal protein S4 [Doliocarpus major subsp. major]
          Length = 165

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 92/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QL 159
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +       
Sbjct: 60  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSF 119

Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 163


>gi|293634109|gb|ADE60434.1| ribosomal protein subunit 4 [Polytrichastrum sphaerothecium]
          Length = 174

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 11  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 69

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + +    +      ++
Sbjct: 70  RLGMAPTIPGARQLVNHKHILVNDSIVNIPSYRCKPQDFITIKDRQESQTIIARNIDFSQ 129

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 130 KYKIPNHLTFNSLEKKGLVNQI---LDRESISLKINELLVVEYYSR 172


>gi|289599895|gb|ADD12898.1| ribosomal protein S4 [Hibbertia amplexicaulis]
          Length = 163

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN   V+I SYRC   D+I VK + K  A +      +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNDCIVDIPSYRCNPRDIITVKDEHKSRAMIQNYLDSSSHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P+Y++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161


>gi|328541098|gb|AEB21773.1| ribosomal protein S4 [Bazzania pearsonii]
          Length = 154

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             KQK++ +YG ++E++     + A +++G T   L+  LE RLD  ++R    PTI  A
Sbjct: 2   EEKQKLRFHYG-LTERQLLKYVRIARKTKGSTGQVLLQSLEMRLDNTIFRLGMAPTIPGA 60

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171
           RQ VNH+HV +N   V+I SY CK GD+I ++ K K  + + +   L +   +P +++ +
Sbjct: 61  RQLVNHKHVAINSNIVDIPSYNCKPGDIITIRDKQKSXSIITKNINLFQNLKIPSHLTFD 120

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +  +  +  +        + +   LVVE+YSR
Sbjct: 121 SIKLCGSINQTINR---EWINLKINELLVVEYYSR 152


>gi|289599897|gb|ADD12899.1| ribosomal protein S4 [Hibbertia banksii]
          Length = 167

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNHRH+LVN R ++I SYRCK  D+I VK + K  A +     
Sbjct: 60  ILFRLGMASTIPGARQLVNHRHILVNDRILDIPSYRCKPRDIITVKDEHKSRALIQNYLD 119

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SSPHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 165


>gi|289599933|gb|ADD12917.1| ribosomal protein S4 [Hibbertia saligna]
          Length = 167

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 3   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 61

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +
Sbjct: 62  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 121

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P+Y++++         +I  S       + +   LVVE+YSR
Sbjct: 122 SHEELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165


>gi|17154615|emb|CAC83920.1| ribosomal protein S4 [Solenomelus pedunculatus]
          Length = 182

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +  +       ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSPHEELPNHLTIDLLQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|293612006|gb|ADE48447.1| ribosomal protein 4 [Encephalartos whitelockii]
          Length = 174

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 7   NQSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 65

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + K  A + +  
Sbjct: 66  NTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNI 125

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 126 DLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 172


>gi|63101023|gb|AAY33136.1| small ribosomal protein 4 [Hondaella brachytheciella]
          Length = 184

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 8/189 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+P   R     ++      K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   PGLTNKTP---RLNSSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 57  KAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P +++ +         +I   L      + +  
Sbjct: 117 DFITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINE 173

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 174 LLVVEYYSR 182


>gi|116010527|emb|CAL37370.1| ribosomal protein S4 [Trithrinax brasiliensis]
 gi|116010529|emb|CAL38868.1| ribosomal protein S4 [Phoenix reclinata]
          Length = 182

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P++++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|74273091|gb|ABA01245.1| ribosomal protein S4 [Passiflora multiflora]
          Length = 183

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPKKYKGLVNQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|289599903|gb|ADD12902.1| ribosomal protein S4 [Hibbertia commutata]
          Length = 167

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 3   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 61

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +
Sbjct: 62  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 121

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P+Y++++         +I  S       + +   LVVE+YSR
Sbjct: 122 SHEELPKYLTLHAFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 165


>gi|3914846|sp|O20210|RR4_DIERO RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292844|emb|CAA92537.1| ribosomal protein S4 [Dietes robinsoniana]
          Length = 182

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P +    G     + R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRPGS----GSDPKNKSRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGLVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|289599917|gb|ADD12909.1| ribosomal protein S4 [Hibbertia exasperata]
          Length = 166

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
            R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 1   SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNI 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNH+H+LVN   V+I SYRCK  D+I VK + K  A +      
Sbjct: 60  LFRLGMASTIPGARQLVNHKHILVNDGIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SPHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 164


>gi|3914868|sp|O36054|RR4_SPASP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2293070|emb|CAA92547.1| ribosomal protein S4 [Sparaxis sp. 'Lejeune 1997']
          Length = 183

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPLQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|157689496|gb|ABV65304.1| ribosomal protein S4 [Hypericum kalmianum]
          Length = 184

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               KSP+  +     +  Q    K S + ++L  KQK++ +YG ++E++  +  + A +
Sbjct: 1   GLTSKSPIVKKRNP--IRYQPSYFKKSQYHIRLEEKQKLRFHYG-LTERQLLNYVRLAAK 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+ VNG  VNI S+RCK GD
Sbjct: 58  AKGQTGQVLLQLLEMRLDNILFRLGMGSTIPQARQLVNHRHIFVNGHIVNIPSFRCKPGD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I V+ + K    V      + R ++  ++++          +I  + +     + +   
Sbjct: 118 IITVRDEQKSRTMVENYLNSSSRKELSNHLTLRRFEYTGLVNQIIDTHR---VGLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|293611960|gb|ADE48424.1| ribosomal protein 4 [Ceratozamia hildae]
          Length = 179

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 8/183 (4%)

Query: 25  SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
               +R+        R+    S + ++L  KQK++ +YG ++E++     + A R++G T
Sbjct: 2   KRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGST 57

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRC   DVI V+
Sbjct: 58  GQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPSYRCNPRDVITVR 117

Query: 145 QKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
            + +  A + +   L+++D +P +++++         +I  S       + +   LVVE+
Sbjct: 118 DQQRSRAMIDKNLDLSQKDQMPNHLTLHSSRYKGLVHQIIDSK---WISLKINELLVVEY 174

Query: 204 YSR 206
           YSR
Sbjct: 175 YSR 177


>gi|51860567|gb|AAU11420.1| ribosomal protein small subunit 4 [Ephedra distachya]
          Length = 202

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 2   GPRSKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 57  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 117 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 176

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 177 NKIIDTKD---LQLKIKEMLVIEYYSR 200


>gi|33413181|emb|CAD86727.1| ribosomal protein small subunit 4 [Fissidens fasciculatus]
          Length = 182

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRSDNIIFRLGMTPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K    +++    +++  +P +++ N         +I          + +   L
Sbjct: 117 ITIKDQQKYQVMIIKNVNFSQKYKIPNHLTFNSLEKKGLVKQIIDQ---ESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|58293893|gb|AAW69893.1| small ribosomal protein 4 [Zygodon forsteri]
          Length = 189

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+     S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTSKLKSSS---TNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SY
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHHIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D + +K + K    V +      +  +P ++  N      +  +I   L      
Sbjct: 117 RCKPQDSLTIKNRQKSQDIVAKNINFYPKYKIPNHLIYNSLEKKGSVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|67035855|gb|AAY62854.1| small ribosomal protein subunit 4 [Meiothecium chlorocladum]
          Length = 179

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 13  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +  +
Sbjct: 72  IIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQDFITIKNQQKSEIIINKNIE 131

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 FYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDLKINELLVVEYYSR 177


>gi|14090466|gb|AAK53518.1| small ribosomal protein 4 [Pseudosymblepharis schimperiana]
          Length = 182

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 21  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGLILLQLLEMRLDNVIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K    + +     ++ 
Sbjct: 80  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQVMITKNVDFFQKS 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 140 KIPNHLTFNSLEKKGLVNQI---LDQELIGLKINELLVVEYYSR 180


>gi|7576577|gb|AAF63901.1| ribosomal protein system 4 [Platygyrium repens]
          Length = 185

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNISPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +  +  ++  +P ++  +         +I          + +  
Sbjct: 119 DFITIKNQRKSETIISKNIEFYQKSKIPNHLIYSSLEKKGLVNQIVDR---ESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|20531057|gb|AAM27351.1| ribosomal protein 4 [Buxbaumia viridis]
          Length = 192

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K P     Y    +      K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGSLPGLTNKIPQLKSGYT---NQSVSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   +NI
Sbjct: 57  LKYIRIARRTKGSTGEILLQLLEMRLDNIIFRLGIAPTIPGARQLVNHRHILVNNNIINI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SY CK  D I +K   K    V +  +L+++  +P +++ N         +I   L   
Sbjct: 117 PSYCCKPQDFITIKNSQKSQTIVTKNIELSQKSKIPNHLTFNFLEKKGLVNQI---LDHE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 174 SIGLKINXLLVVEYYSR 190


>gi|17154708|emb|CAC79544.1| ribosomal protein S4 [Thereianthus racemosus]
          Length = 183

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSVLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|89147840|gb|ABD62768.1| ribosomal protein 4 [Riccardia multifida]
          Length = 197

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+G       + P   +S    +       K S + L+L  KQK++ +YG ++E+
Sbjct: 4   TKIIRRLGTLPGLTSRIP---KSRSSSIDRSSANKKISQYRLRLEEKQKLRFHYG-LTER 59

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +       A +++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHVL+N   V
Sbjct: 60  QLLKYVCVAKKAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHVLINANMV 119

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           NI SY CK GD+I +K + +    +  + + + +  +P +++        +  RI     
Sbjct: 120 NIPSYNCKTGDIITIKARERNRLKIGSDTNSIQKTGIPNHLAFKSVEFCGSVNRIIDR-- 177

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 178 -EGIDLKINELLVVEYYSR 195


>gi|3098248|gb|AAC15572.1| small ribosomal protein 4 [Rhizogonium novae-hollandiae]
          Length = 192

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 8/197 (4%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E++ 
Sbjct: 1   IIRRLGTLPGLNNKIPQLKSSS---ISQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
            +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R VNI
Sbjct: 57  LNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDV 189
            SYRCK  D I +K + K    + +     ++  +P ++  N         +I   L   
Sbjct: 117 PSYRCKPQDFITIKDQQKYQTIISKNINFYQKHKIPNHLINNSLEKKGLVNQI---LDRE 173

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LV+E+YSR
Sbjct: 174 SIDLKINELLVLEYYSR 190


>gi|289599913|gb|ADD12907.1| ribosomal protein S4 [Hibbertia echiifolia]
          Length = 165

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVNG  V+I SYRCK  D+I VK + K  A +      +
Sbjct: 60  FRLGMASTIPGARQLVNHRHILVNGGIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDSK---WIVLKINELLVVEYYSR 163


>gi|293611994|gb|ADE48441.1| ribosomal protein 4 [Encephalartos ferox]
          Length = 175

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
            +R+        R+    S + ++L  KQK++ +YG ++E++     + A R++G T   
Sbjct: 1   KSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQV 56

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + 
Sbjct: 57  LLQLLEMRSDNTIFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQ 116

Query: 148 KQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           K  A + +   L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 117 KSRAMIDKNIDLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 173


>gi|293611978|gb|ADE48433.1| ribosomal protein 4 [Cycas simplicipinna]
          Length = 182

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G       +R+        R+    S + ++   KQK++ +YG ++E++     + A R+
Sbjct: 1   GLTNKRPKSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGRA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  DV
Sbjct: 57  KGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 116

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I ++ + +  A + +   L+++D +P +++++         +I  S       + +   L
Sbjct: 117 ITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK---WISLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|14090504|gb|AAK53537.1| small ribosomal protein 4 [Mitthyridium undulatum]
          Length = 183

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K     +S            K S + ++L  KQK++ +YG ++E++  +  + A + 
Sbjct: 1   LTNKXXPQLKSNSINQ--STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKV 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D 
Sbjct: 58  KGSTGQVLLQLLEMRLDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K    +++ ++ + +   P +++ N         +I   L      + +   L
Sbjct: 118 ITIKDQQKYQTMIVKNTKFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELL 174

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 175 VVEYYSR 181


>gi|56416574|ref|YP_153648.1| 30S ribosomal protein S4 [Anaplasma marginale str. St. Maries]
 gi|56387806|gb|AAV86393.1| ribosomal protein S4 [Anaplasma marginale str. St. Maries]
          Length = 178

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 79/172 (45%), Positives = 109/172 (63%), Gaps = 2/172 (1%)

Query: 34  PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93
            G HG     K S FG Q  A QK K YY  +S K+  + F  A   +GDT  NL+  LE
Sbjct: 8   SGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSSKQLTNTFLRAYNRKGDTGDNLVGALE 66

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
           SRL  +VY A FVPT+F+ARQ V+H+HV VNG+ VNI S+  K GDV+++++++ +L  V
Sbjct: 67  SRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKVVNIPSFSVKPGDVVQIRERATELPMV 126

Query: 154 LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
           L A Q  ER VP+++ V+     A ++R+P   + VPYP  M+ NLVVEF+S
Sbjct: 127 LAAIQSQERRVPDHLEVDTAQRSARYLRVPKYCE-VPYPANMEVNLVVEFFS 177


>gi|289599923|gb|ADD12912.1| ribosomal protein S4 [Hibbertia hamulosa]
          Length = 163

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +  +   +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNSLDSSPHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 161


>gi|3914843|sp|O20103|RR4_CROSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292829|emb|CAA92534.1| ribosomal protein S4 [Crocosmia sp. 'Lejeune 1997']
          Length = 183

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I    K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|117306754|emb|CAH73346.1| ribosomal protein S4 [Catagonium nitidum]
          Length = 183

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 14  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 72

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K  A + +
Sbjct: 73  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSEAIISK 132

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 133 NIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 181


>gi|37992425|gb|AAR06391.1| small ribosomal protein 4 [Ancistrodes genuflexa]
          Length = 185

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLSNKIPQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T    +   E+R D I++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 58  KAKGSTGEVSLQLPETRSDNIIFRLGMTPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K  A + +  +  ++  +P +++ N         +I   L      + +  
Sbjct: 118 DFITIKDQRKSEAIIGKNIEFYQKYKIPNHLTYNLLEKKGLVNQI---LDRESISLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|289599901|gb|ADD12901.1| ribosomal protein S4 [Hibbertia bracteata]
          Length = 168

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 4   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 62

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    +      +
Sbjct: 63  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRDLIQNYLDSS 122

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 123 PHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 166


>gi|77862531|gb|ABB04538.1| small ribosomal protein 4 [Lunularia cruciata]
          Length = 180

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 11  INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+L+N  +V+I SY CK  DVI +K + K  + + +
Sbjct: 70  LDNIIFRLGMAPTIPGARQLVNHRHILINDNTVDIPSYNCKPKDVITIKNRQKSQSIITK 129

Query: 156 AS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 ++ +P ++S +         +I          + +   LVVE+YSR
Sbjct: 130 NLTSFQKQKIPNHLSFDLIQFQGLINQIIDR---EWIYLKINELLVVEYYSR 178


>gi|74273093|gb|ABA01246.1| ribosomal protein S4 [Passiflora penduliflora]
          Length = 183

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|184127983|gb|ACC67891.1| ribosomal protein small subunit 4 [Marattia attenuata]
          Length = 188

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 9/191 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     + ++     +     K K S + ++L AKQ+++  YG ++E++     + A +
Sbjct: 1   PGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGK 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIM 195
           +I V+ ++     V +  +   +D +PE+++++    +       RI +        + +
Sbjct: 119 IISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNI 175

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 176 NELLVVEYYSR 186


>gi|293633971|gb|ADE60365.1| ribosomal protein subunit 4 [Atrichum androgynum]
          Length = 182

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P     Y   ++      K S + ++L  KQK++ +YG I+E++  +  + A R+
Sbjct: 1   LTNKTPQLKSGY---INQTVSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN R VNI SYRCK  D 
Sbjct: 57  KGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDRIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + +  A        +++  +P +++ N         +I   L      + +   L
Sbjct: 117 ITIKNRQEFQAITTRNIDFSQKYKIPNHLTFNSLEKKGLVNQI---LDRESIDLEINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|254995573|emb|CAO82745.1| ribosomal protein S4 [Lycopodium clavatum]
          Length = 172

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   STSSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + +S+    + + ++
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRTIIAKNNK 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++   +P +++++         +I          + +   LVVE+YSR
Sbjct: 125 ISQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170


>gi|74273205|gb|ABA01302.1| ribosomal protein S4 [Passiflora tacsonioides]
          Length = 183

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R S+ S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSSRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|63101031|gb|AAY33140.1| small ribosomal protein 4 [Iwatsukiella leucotricha]
          Length = 182

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D 
Sbjct: 57  KGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K    + +  +  ++  +P +++ +         +I   L      + +   L
Sbjct: 117 ITIKNQRKSETIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|289599899|gb|ADD12900.1| ribosomal protein S4 [Hibbertia baudouinii]
          Length = 165

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +
Sbjct: 60  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  +       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDNK---WIGLKINELLVVEYYSR 163


>gi|89112917|gb|ABD61077.1| ribosomal protein subunit 4 [Ptychomitrium gardneri]
          Length = 172

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ +NHRH+LVN R VNI SYRCK  D I +K + K  A V++
Sbjct: 62  LDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNIPSYRCKPQDFITIKARQKSQAMVIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++   VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NVDFSQNYKVPNHLTFNSLEKKGLVNQI---LDHGSIGLKINELLVVEYYSR 170


>gi|255116226|gb|ACU01165.1| small ribosomal protein subunit 4 [Neodolichomitra yunnanensis]
          Length = 189

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
                    K+P         ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 2   FRTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYV 57

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 58  RIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYR 117

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 118 CKPQDFITIKDQRKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLINQI---LDRESIGL 174

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 175 KINELLVVEYYSR 187


>gi|89112947|gb|ABD61092.1| ribosomal protein subunit 4 [Grimmia pulvinata]
          Length = 172

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRC+  D I +K + K  + +++
Sbjct: 62  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCRPQDFITIKDRQKSQSMIIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 170


>gi|46811034|gb|AAT01835.1| small ribosomal protein 4 [Neohodgsonia mirabilis]
          Length = 178

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 9   INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 67

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+L+N  +V+I SY CK  DVI +K + K  + V +
Sbjct: 68  LDNIIFRLGMAPTIPGARQLVNHRHILINDNTVDIPSYNCKPKDVITIKNRQKSQSIVTK 127

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ +         +I          + +   LVVE+YSR
Sbjct: 128 NLNSFQKQKIPNHLNFDLIQFKGLVNQIIDR---EWIYLKINELLVVEYYSR 176


>gi|92417439|gb|ABE76815.1| ribosomal protein subunit 4 [Lycopodium clavatum]
          Length = 175

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 9   STSSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + +S+    + + ++
Sbjct: 68  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRTIIAKNNK 127

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++   +P +++++         +I          + +   LVVE+YSR
Sbjct: 128 ISQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 173


>gi|17154611|emb|CAC83917.1| ribosomal protein S4 [Galaxia sp. Goldblatt and Nanni 10254]
          Length = 182

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G     Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDPKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|53830732|gb|AAU95215.1| small ribosomal protein 4 [Syrrhopodon involutus]
          Length = 177

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 8   INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++
Sbjct: 67  LDNIIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFITIKDQQKYQTMIIK 126

Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++   P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 127 NTNFFSKHKTPNHLTFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175


>gi|255116222|gb|ACU01163.1| small ribosomal protein subunit 4 [Leptocladiella delicatula]
          Length = 182

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 8/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   LTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D 
Sbjct: 57  KGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I +K + K    + +  +  ++  +P +++ +         +I   L      + +   L
Sbjct: 117 ITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELL 173

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 174 VVEYYSR 180


>gi|17154613|emb|CAC83919.1| ribosomal protein S4 [Olsynium filifolium]
          Length = 182

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGTLPGLTNKRP----RSGSDLKNQLRSGKRSQYRIRLEKKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  QQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +  +    +  ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNSIASSSHEELPNHLTIDLIQYKGLVNKIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|51860471|gb|AAU11372.1| ribosomal protein small subunit 4 [Gnetum montanum]
          Length = 199

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 10/204 (4%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
               KI RR+        K P   +         R   K S     L+ KQK++ ++G +
Sbjct: 1   GPLFKIIRRLKTLPVLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R   +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN 
Sbjct: 57  TERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVND 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRI 182
             VNI SY+CK  DVI +K K       +     ++  E  +P +++++         +I
Sbjct: 117 HVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + ++  LV+E+YSR
Sbjct: 177 IDRKD---IQLNIKEMLVIEYYSR 197


>gi|32879555|emb|CAE11888.1| ribosomal protein S4 [Duthiastrum linifolium]
          Length = 183

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P +       L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|74273135|gb|ABA01267.1| ribosomal protein S4 [Passiflora sexflora]
          Length = 183

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R+ +P ++ +          +I  S       + 
Sbjct: 113 KPCDLITVKDEQKSKDMIKKSLDSFPRNKLPTHLILYPQKYKGLVNQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INELLVVEYYSR 181


>gi|289599860|gb|ADD12881.1| ribosomal protein S4 [Davilla flexuosa]
 gi|289599862|gb|ADD12882.1| ribosomal protein S4 [Davilla kunthii]
 gi|289599864|gb|ADD12883.1| ribosomal protein S4 [Davilla lacunosa]
          Length = 163

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN R VNI SYRCK  D+I VK + K  A +      +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVNIPSYRCKPRDIITVKDEHKSRALIQNYLDSSPHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161


>gi|309390250|gb|ADO78130.1| SSU ribosomal protein S4P [Halanaerobium praevalens DSM 2228]
          Length = 198

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M+++ + + K  RR+G N++G PK+              R   K S +G QL  KQ+++ 
Sbjct: 1   MARKRNPRFKESRRLGLNIYGHPKAMKRADGTF-----NRANRKLSNYGQQLLEKQRLRA 55

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + E KF    KEA +  G    NLI  LE RLD +VYRA F  +I  ARQ V H H
Sbjct: 56  YYG-LMENKFSRYVKEAVKENGVAGDNLIKSLEKRLDNLVYRAGFARSIRQARQMVVHGH 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ ++I SY  K GD I ++ K ++     E          EY+  ++DN  A   
Sbjct: 115 ILVNGKKIDIPSYAIKIGDQISLRNKYRKNNLFRENFLDRHLSEFEYLERDYDNFSAKLK 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++    P+ +   LV+EFYSR
Sbjct: 175 A---EIEIDEIPIEINDQLVIEFYSR 197


>gi|3914841|sp|O19995|RR4_BABST RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292746|emb|CAA92532.1| ribosomal protein S4 [Babiana stricta]
          Length = 183

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNKIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|289599937|gb|ADD12919.1| ribosomal protein S4 [Hibbertia vestita]
          Length = 165

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    +      +
Sbjct: 60  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRDLIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 163


>gi|17154624|emb|CAC83924.1| ribosomal protein S4 [Pardanthopsis dichotoma]
          Length = 183

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I +YRCK  D+I  + K +  A +      +  + ++P +++++          I  S
Sbjct: 116 VDIPAYRCKPRDIITTRNKQRSKALIQNXIASSPHQGELPNHLTIDPFQYKGLVNPIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|3914866|sp|O36051|RR4_NEOSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292976|emb|CAA92545.1| ribosomal protein S4 [Neomarica sp. 'Lejeune 1997']
          Length = 182

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +    +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WVGLKIN 182


>gi|42718058|gb|AAS38451.1| rps4 [Splachnum luteum]
          Length = 189

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P    S     +      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKIPQLKSSS---XNQSPSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I          
Sbjct: 117 RCKPQDFITIKDRQKSQVIISKNIEFYQKYKIPNHLIYNSLKNQGLVNQILDRQ---SIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|52788813|gb|AAU87380.1| ribosomal protein small subunit 4 [Pilularia globulifera]
          Length = 196

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+    ++       Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   IRRLKSLPGLTGKASKQKKTRVAAE--QSTSKKISQFCVRLEAKQRLRFNYG-VTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD +V+     PTI AARQ VNHRH+LVN R V++ 
Sbjct: 58  RYVRIARKTKGSTGQVLLQLLEMRLDNVVFNLGLAPTIPAARQLVNHRHILVNDRIVDVP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186
           SYRC+  D+I V+ +      +      + R  ++P ++S   +  +       ++    
Sbjct: 118 SYRCEPQDIITVRNRPTSYNVLKGGIFESSRSNEIPNHLSLSILEGNKPKGLVNQV---A 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 175 NRESIDLNINELLVVEYYSR 194


>gi|108861080|gb|ABG21412.1| ribosomal protein small subunit 4 [Marsilea fadeniana]
          Length = 199

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E+
Sbjct: 1   LKMIRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTER 57

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V
Sbjct: 58  QLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIV 117

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRIP 183
           ++ SYRC+  D I V+ +      +           ++P+++S   +  +       ++ 
Sbjct: 118 DVPSYRCEPQDNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV- 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
              K     + +   L+VE+YSR
Sbjct: 177 --AKRESMDLNINELLIVEYYSR 197


>gi|305672323|gb|ADM63585.1| ribosomal protein S4 [Pratia angulata]
          Length = 173

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KSP + +        Q    K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGTLPGLTTKSPKDRK----DRRNQSGSRKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  K   K    +  +   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTITAKDDGKSKVLIQNSLDSSPHEELPNHLTLDSVQYKGLVNQIIDS 172


>gi|289599909|gb|ADD12905.1| ribosomal protein S4 [Hibbertia dentata]
          Length = 164

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 3   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 61

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +   
Sbjct: 62  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSSHE 121

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P+Y++++         +I  S       + +   LVVE+YSR
Sbjct: 122 ELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 162


>gi|254995577|emb|CAO82747.1| ribosomal protein S4 [Lycopodium fastigiatum]
 gi|254995583|emb|CAO82750.1| ribosomal protein S4 [Lycopodium volubile]
          Length = 172

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + + +  A + + ++
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRPESRAIIAKNNK 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++   +P +++++         +I          + +   LVVE+YSR
Sbjct: 125 FSQTYKIPNHLTLHSLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170


>gi|184127959|gb|ACC67879.1| ribosomal protein small subunit 4 [Marattia salicina]
          Length = 189

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     + ++     +     K K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 1   LPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAG 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194
           D+I V+ ++     V +  +   +D +PE+++++    +       RI +        + 
Sbjct: 119 DIISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|289599883|gb|ADD12892.1| ribosomal protein S4 [Dillenia triquetra]
          Length = 167

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 1   QSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D++ VK + K  A +     
Sbjct: 60  ILFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKNEHKSRAMIQNYLD 119

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SSPHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 165


>gi|51860501|gb|AAU11387.1| ribosomal protein small subunit 4 [Ephedra strobilacea]
          Length = 202

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65
            + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG +
Sbjct: 3   PRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-L 57

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN 
Sbjct: 58  TERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNH 117

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFV 180
             V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         
Sbjct: 118 HIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVN 177

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I  +       + ++  LV+E+YSR
Sbjct: 178 KIIDTKD---LQLKIKEMLVIEYYSR 200


>gi|117306742|emb|CAH73339.1| ribosomal protein S4 [Lepyrodon pseudolagurus]
          Length = 183

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 57  AKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYMVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNQRKSEAIINKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|14090442|gb|AAK53506.1| small ribosomal protein 4 [Calymperes afzelii]
          Length = 182

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++  +  + A +++G T   L+ FLE RLD I++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKTKGSTGQILLQFLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++ +  + 
Sbjct: 78  RLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIIKNTNFSP 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 138 KYKIPSHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|7576625|gb|AAF63925.1| ribosomal protein system 4 [Curviramea mexicana]
          Length = 168

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
               +  S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 3   STSNTXISQYRIRLAEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMRLDN 61

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +  +
Sbjct: 62  VIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSEIIISKNIE 121

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 122 FSQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 167


>gi|32401791|gb|AAP80884.1| small ribosomal protein 4 [Picea smithiana]
          Length = 193

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R         K P N +        +    K S + ++   KQK++ +YG ++E++    
Sbjct: 6   RPKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKY 60

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE R D I+++    PTI  ARQ VNH H+ VN   V+I SY
Sbjct: 61  VRIARRAKGSTGQVLLQLLEMRSDNILFQLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 120

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK  DVI ++ + +    + +   L +RD +P +++ +         +I  S       
Sbjct: 121 PCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFINQIIDSK---WIS 177

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 178 LKINELLVVEYYSR 191


>gi|289599885|gb|ADD12893.1| ribosomal protein S4 [Doliocarpus elegans]
          Length = 163

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAER 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +          
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSFPHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161


>gi|168704561|ref|ZP_02736838.1| 30S ribosomal protein S4 [Gemmata obscuriglobus UQM 2246]
          Length = 202

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 109/208 (52%), Gaps = 8/208 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+    K K++R +G  ++ +      +  R Y PG+HGQ RK K S +GL LR K+K+
Sbjct: 1   MSRHSQPKGKVNRALGMVIYEKRGAVKALERREYRPGMHGQ-RKGKVSEYGLALREKKKI 59

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K YYG + E++    ++ A +S  +T   L+   E RLD +V RA F  T   ARQ VNH
Sbjct: 60  KHYYG-LHERQLVRFYQLATKSPENTGTELLVLCERRLDNVVRRAGFARTRDEARQGVNH 118

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H  VNGR V++ SY  K GDV+ VK +        E          +++  + + +  T
Sbjct: 119 GHFQVNGRKVDVASYLVKAGDVVAVKARPNLQKKYRERLTEGLHSA-DWLVSDAEALSFT 177

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R+P+   DV  PV +Q   V+E  SR
Sbjct: 178 VTRLPA-DGDVSLPVDIQR--VIEILSR 202


>gi|32401789|gb|AAP80883.1| small ribosomal protein 4 [Picea orientalis]
          Length = 192

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R         K P N +        +    K S + ++   KQK++ +YG ++E++    
Sbjct: 5   RPKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRFHYG-LTERQLLKY 59

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE R D I+++    PTI  ARQ VNH H+ VN   V+I SY
Sbjct: 60  VRIARRAKGSTGQVLLQLLEMRSDNILFQLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 119

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK  DVI ++ + +    + +   L +RD +P +++ +         +I  S       
Sbjct: 120 PCKPQDVITIRDQQRLRDIIRKNLDLFQRDKLPNHLTFHSLQYKGFINQIIDSK---WIS 176

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 177 LKINELLVVEYYSR 190


>gi|15145830|gb|AAK83533.1| rps4 [Tetraplodon pallidus]
          Length = 189

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLKSSS---INQSTANKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V I SY
Sbjct: 57  VRTARKAKGSTGEILLQLLEMRLDNVIFRLGXAPTIPGARQLVNHRHILVNDRIVXIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K  A + +  +  ++  +P +++ N          I   L      
Sbjct: 117 RCKPQDFITIKDRQKSQAIINKNIEFYQKYKIPNHLTYNSLQKQGLVNPI---LDRESXG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+Y R
Sbjct: 174 LKINELLVVEYYPR 187


>gi|58293859|gb|AAW69877.1| small ribosomal protein 4 [Bryomaltaea obtusifolia]
 gi|63191759|gb|AAY34839.1| small ribosomal protein subunit 4 [Bryomaltaea obtusifolia]
          Length = 187

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G        +P    +    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTIXTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD +++     PTI  ARQ +NHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEVLLQLLEMRLDNVIFLLGMAPTIPGARQLINHRHILVNDHIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +     ++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDSITIKSRQKSQNIINKNIDFYQKHRIPNHLTYNSLEKKGLVNQI---LNRELIGLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|305672279|gb|ADM63563.1| ribosomal protein S4 [Abrophyllum ornans]
 gi|305672287|gb|ADM63567.1| ribosomal protein S4 [Carpodetus sp. Johns 9563]
          Length = 173

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   + R ++P +++++         +I  S
Sbjct: 116 IPSYRCKPQDTITARDEQKSRALIQNSLDSSPREELPNHLTLHPFQYKGLVNQIIDS 172


>gi|89112919|gb|ABD61078.1| ribosomal protein subunit 4 [Ptychomitrium sellowianum]
          Length = 172

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 3   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 61

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ +NHRH+LVN R VNI SYRCK  D I +K + K  A V++
Sbjct: 62  LDNVIFRLSMAPTIPGARQLINHRHILVNNRIVNIPSYRCKPQDFITLKARQKSQAMVIK 121

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ N         +I   L      + +   LVVE+YSR
Sbjct: 122 NVDFSQKYKVPNHLTFNSLEKKGLVNQI---LNHGSIGLKINELLVVEYYSR 170


>gi|320455044|dbj|BAJ65669.1| small ribosomal protein 4 [Metzgeria lindbergii]
          Length = 187

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +  N++ +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTNLIGSVNRMINR- 175

Query: 187 KDVPYPVIMQPNLV 200
                 + +   LV
Sbjct: 176 --EWIDLKINELLV 187


>gi|14090472|gb|AAK53521.1| small ribosomal protein 4 [Fissidens philonotulus]
          Length = 182

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 16  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYIRIARKAKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K  A +++   
Sbjct: 75  IIFRLGMAPTIPGARQLVNHRHILVNNYIVNIPSYRCKPQDFITIKNRQKSQAMIIKNVN 134

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L+++  VP Y++ N         +I   L      + +   LVVE+YSR
Sbjct: 135 LSQKYKVPNYLTFNFFEKRGFVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|37683566|gb|AAQ98834.1| small ribosomal protein 4 [Pogonatum semipellucidum]
          Length = 174

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G     L+  LE RLD I++
Sbjct: 11  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSPGQILLQLLEMRLDNIIF 69

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           +    PTI  ARQ V+H+H+LVN   VNI SYRCK  D I +K + K  A + +    ++
Sbjct: 70  QLGMAPTIPGARQLVSHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQAIIAKNIDFSQ 129

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 130 KYKIPNHLTFNSLEKKGLVNQI---LDRELIGLKINELLVVEYYSR 172


>gi|320455022|dbj|BAJ65658.1| small ribosomal protein 4 [Metzgeria americana]
          Length = 188

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 8/195 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     S    +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKLKSSS---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +    + +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175

Query: 187 KDVPYPVIMQPNLVV 201
                 + +   LVV
Sbjct: 176 --EWIDLKINELLVV 188


>gi|305672311|gb|ADM63579.1| ribosomal protein S4 [Griselinia littoralis]
          Length = 173

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  D +P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHDELPKHLTLDPFQYKGLVNQIIDS 172


>gi|184128027|gb|ACC67913.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 176

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD 
Sbjct: 7   QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 65

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 66  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 125

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++ +    +       RI +        + +   LVVE+YSR
Sbjct: 126 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 174


>gi|153816224|ref|ZP_01968892.1| hypothetical protein RUMTOR_02473 [Ruminococcus torques ATCC 27756]
 gi|145846407|gb|EDK23325.1| hypothetical protein RUMTOR_02473 [Ruminococcus torques ATCC 27756]
          Length = 181

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           +R   K S +GLQLR KQK K  YG + EK FR+ + +A +  G T  NL+  LESRLD 
Sbjct: 17  KRANRKMSEYGLQLREKQKAKFIYGVL-EKPFRNYYAKAKQMEGMTGENLMRILESRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     T   ARQ V+H+HVLVNG+ VNI SY  K GD IE+K+  K      +  +
Sbjct: 76  VIFRMGLARTRKEARQIVDHKHVLVNGKQVNIPSYLVKAGDTIEIKENKKGSQRYKDILE 135

Query: 159 LAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + VPE++ V+ +N+  +   +P+        V +   L+VE YS+
Sbjct: 136 ATGSNMVPEWLDVDAENLKGSVKELPAR---EAIDVPVDEMLIVELYSK 181


>gi|49182762|gb|AAT57843.1| small ribosomal protein [Monoclea sp. Shaw 10151]
          Length = 187

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTTKTLKSKSGY---INQSISNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RL+ I++R   V T+  ARQ VNHRH+L+N   V+I SY C
Sbjct: 57  IARKAKGSTGQVLLQLLEMRLNNILFRLGMVLTVPGARQLVNHRHILINNNMVDIPSYNC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  DVI +K + K  + + +     ++  +P ++S +   +     ++          + 
Sbjct: 117 KPKDVITIKDRPKSQSIITKNLNSFQKSKIPNHLSFDLMQVKGLVNQMIDR---EWILLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|289599919|gb|ADD12910.1| ribosomal protein S4 [Hibbertia fasciculata]
          Length = 163

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSSHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P+Y++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKYLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161


>gi|162415130|gb|ABX89139.1| ribosomal protein S4 [Barbula unguiculata]
          Length = 187

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 26  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 84

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +     ++ 
Sbjct: 85  GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRQKSQVMITKNVDFFQKS 144

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 145 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 185


>gi|254995581|emb|CAO82749.1| ribosomal protein S4 [Lycopodium obscurum]
          Length = 172

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   STPSKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + + +  A + + ++
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITARDRPESRAIIAKNNK 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++   VP ++++           I          + +   LVVE+YSR
Sbjct: 125 FSQTYKVPNHLTLQSLQNKGLVNEIIDR---ESIDLNINELLVVEYYSR 170


>gi|58293907|gb|AAW69900.1| small ribosomal protein 4 [Codonoblepharon pungens]
          Length = 189

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+     S    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLRVLPGLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    V +      +  +P ++  N         +I   L      
Sbjct: 117 RCKPKDSITIKNRKKSQDIVAKNIDFYPKSKIPNHLIYNSLEKKGFVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|320455048|dbj|BAJ65671.1| small ribosomal protein 4 [Metzgeria sp. Tsubota s.n.]
          Length = 187

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISXYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P +++ +    + +  ++ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQKRYRSILMETLNSVQKPGIPNHLAFDSTKFIGSVNQMINR- 175

Query: 187 KDVPYPVIMQPNLV 200
                 + +   LV
Sbjct: 176 --EWIDLKINELLV 187


>gi|33413237|emb|CAD86754.1| ribosomal protein small subunit 4 [Leptodontium flexifolium]
          Length = 180

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 14  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGLILLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +   
Sbjct: 73  IIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDCITINDRKKSQIMITKNID 132

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 133 FSQKSKIPHHLAFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 178


>gi|146261583|gb|ABQ15101.1| ribosomal protein S4 [Rhodoleia championii]
          Length = 163

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ + G ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYXIRLEEKQKLRFHXG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  + + K  A +      +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNGRPVDIPSYRCKPRDIITARDEQKSRALIQNYIDSSPHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161


>gi|78369609|gb|ABB43034.1| ribosomal protein 4 [Syrrhopodon mauritianus]
          Length = 182

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKTKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I+++    PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    + +
Sbjct: 72  LDNIIFQLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIGK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NVNFSPKYKIPSHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|14090480|gb|AAK53525.1| small ribosomal protein 4 [Dicnemon calycinum]
          Length = 182

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A  ++G T   L+  LE R
Sbjct: 13  INQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAREAKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
            D +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + +  A +++
Sbjct: 72  SDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQESQAMIIK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  VP +++ +         +I   L      + +   LVVE+YSR
Sbjct: 132 NIDFSQKSKVPNHLTFSSLEKKGLVNQI---LDQKSIGLKINELLVVEYYSR 180


>gi|67035857|gb|AAY62855.1| small ribosomal protein subunit 4 [Paranapiacabaea paulista]
          Length = 184

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 8/191 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P    S     +      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GTLPGLTNKTPQLKSSS---SNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IARKAKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYMVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +  +  ++  +P +++ N         +I   L      + 
Sbjct: 117 KPQDFITIKNQHKSEIIINKNIEFYQKSKIPNHLTYNSLEKKGLINQI---LDRESIDLK 173

Query: 195 MQPNLVVEFYS 205
           +   LVVE+YS
Sbjct: 174 INELLVVEYYS 184


>gi|63101087|gb|AAY33168.1| small ribosomal protein 4 [Lopidium concinnum]
          Length = 186

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 7/190 (3%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 KS    +     ++      K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   LPGLTNKSAPQLK--PSSINQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 57

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V+I SYRCK 
Sbjct: 58  RKAKGSTGEILLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSYRCKP 117

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I +K K K  + + +  +  ++  +  +++ +         +I   L      + + 
Sbjct: 118 QDFITIKNKQKSESIISKNIEFYQKSKIANHLTYSSLEKKGLVNQI---LDRESIGLKIN 174

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 175 ELLVVEYYSR 184


>gi|284468535|gb|ADB90328.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906411|gb|ADT61778.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 183

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P         ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 57  AKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K    + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNQRKSETIISKNIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|51860497|gb|AAU11385.1| ribosomal protein small subunit 4 [Ephedra sinica]
 gi|51860527|gb|AAU11400.1| ribosomal protein small subunit 4 [Ephedra coryi]
 gi|51860541|gb|AAU11407.1| ribosomal protein small subunit 4 [Ephedra triandra]
 gi|51860563|gb|AAU11418.1| ribosomal protein small subunit 4 [Ephedra altissima var. algerica]
 gi|51860579|gb|AAU11426.1| ribosomal protein small subunit 4 [Ephedra major subsp. procera]
          Length = 200

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65
            + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG +
Sbjct: 1   PRFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN 
Sbjct: 56  TERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNH 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFV 180
             V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         
Sbjct: 116 HIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVN 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I  +       + ++  LV+E+YSR
Sbjct: 176 KIIDTKD---LQLKIKEMLVIEYYSR 198


>gi|3914870|sp|O36057|RR4_TIGSP RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2293099|emb|CAA92548.1| ribosomal protein S4 [Tigridia sp. 'Lejeune 1997']
 gi|17154477|emb|CAC83915.1| ribosomal protein S4 [Calydorea pallens]
 gi|17154607|emb|CAC83913.1| ribosomal protein S4 [Eleutherine latifolia]
          Length = 182

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +    +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|77019183|emb|CAH60197.1| chloroplast 30S ribosomal protein S4 [Grimmia longirostris]
          Length = 177

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 8   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD ++++    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + +  A +++
Sbjct: 67  LDNVIFQLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQESQAMIIK 126

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 127 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 175


>gi|320455042|dbj|BAJ65668.1| small ribosomal protein 4 [Metzgeria limbatosetosa]
          Length = 187

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTLKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +   ++ +  R+ +  
Sbjct: 117 VDIPSYNCELGDIIAIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSVNRMINR- 175

Query: 187 KDVPYPVIMQPNLV 200
                 + +   LV
Sbjct: 176 --EWIDLKINELLV 187


>gi|125662710|gb|ABN50305.1| small ribosomal protein 4 [Ephedra intermedia]
          Length = 199

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 12/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+        K P   +    G    R   K S + + L+ KQK++ +YG ++E
Sbjct: 1   RCKIIRRLKTLPGLTSKRPKYKKR---GHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   
Sbjct: 57  RQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRI 182
           V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         +I
Sbjct: 117 VDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             +       + ++  LV+E+YSR
Sbjct: 177 IDTKD---LQLKIKEMLVIEYYSR 197


>gi|14090432|gb|AAK53501.1| small ribosomal protein 4 [Syrrhopodon leprieurii]
          Length = 182

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIIK 131

Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++  +P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 132 NTNFFSKHKIPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|14090426|gb|AAK53498.1| small ribosomal protein 4 [Mitthyridium fasciculatum]
          Length = 182

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131

Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++  ++   P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NTKFFSKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|73476074|emb|CAE45346.1| ribosomal protein S4 [Dierama robustum]
          Length = 182

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 10/190 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V
Sbjct: 56  QLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGGIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSL 186
           +I SYRCK  D+I  K K +  A +      +    ++P +++V+         +I  S 
Sbjct: 116 DIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHREELPNHLTVDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|74273129|gb|ABA01264.1| ribosomal protein S4 [Passiflora pohlii]
          Length = 186

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFSRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 170 INEFLVVEYYSR 181


>gi|51860507|gb|AAU11390.1| ribosomal protein small subunit 4 [Ephedra nevadensis]
          Length = 200

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDI 65
            + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG +
Sbjct: 1   PRFKIIRRLKTLPGLTSKGPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN 
Sbjct: 56  TERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNH 115

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFV 180
             V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         
Sbjct: 116 HIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVN 175

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I  +       + ++  LV+E+YSR
Sbjct: 176 KIIDTKD---LQLKIKEMLVIEYYSR 198


>gi|293633975|gb|ADE60367.1| ribosomal protein subunit 4 [Dawsonia beccarii]
          Length = 182

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + K    +++    ++
Sbjct: 78  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIVKNIDFSQ 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P ++  NH        +I   L      + +   LVVE+YSR
Sbjct: 138 KYKIPNHLIFNHLERKGLVNQI---LDRESIGLKINELLVVEYYSR 180


>gi|330430072|gb|AEC21406.1| 30S ribosomal protein S4 [Pusillimonas sp. T7-7]
          Length = 154

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QLR KQK+K+ YG + EK+FR  F EA+R RG+T   LI  LESRLD +VYR  F  T 
Sbjct: 1   MQLREKQKLKRMYGVL-EKQFRKYFAEAERRRGNTGETLIQLLESRLDNVVYRMGFGSTR 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYI 168
             ARQ VNHR + +NG + +I S   K GDVI +++K+K    + E+  LA  + +P+++
Sbjct: 60  AEARQLVNHRAIELNGHTADIASMLVKAGDVISIREKAKAQLRIRESLDLATGQGLPQWV 119

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            V+ + +  TF + P           +  ++VVE YSR
Sbjct: 120 EVDTNKLAGTFKQAPDRAD---VARDVNESMVVELYSR 154


>gi|289599931|gb|ADD12916.1| ribosomal protein S4 [Hibbertia salicifolia]
          Length = 163

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAER 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    +       +  
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRVLIQNYLDSFSHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---WVGLKINELLVVEYYSR 161


>gi|289599872|gb|ADD12887.1| ribosomal protein S4 [Dillenia hookeri]
          Length = 166

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/168 (33%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
            R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 1   SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNI 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D++ VK + K  A +      
Sbjct: 60  LFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDS 119

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SPHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 164


>gi|162415112|gb|ABX89130.1| ribosomal protein S4 [Aloina rigida]
          Length = 189

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 28  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 86

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +    +++ 
Sbjct: 87  GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 146

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 147 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 187


>gi|162415080|gb|ABX89114.1| ribosomal protein S4 [Tortula atrovirens]
          Length = 187

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 26  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 84

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +  + K    + +     ++ 
Sbjct: 85  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMINKNVDFYQKS 144

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 145 KIPNHLTFNSLEKKGLINQI---LDQESIGLNINELLVVEYYSR 185


>gi|17154471|emb|CAC83794.1| ribosomal protein S4 [Anomatheca laxa]
          Length = 183

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K        G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRT----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I    K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|117306744|emb|CAH73340.1| ribosomal protein S4 [Lepyrodon lagurus]
          Length = 180

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 8/187 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T    +   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 57  AKGSTGEVSLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYS 205
           LVVE+YS
Sbjct: 174 LVVEYYS 180


>gi|3098246|gb|AAC15571.1| small ribosomal protein 4 [Rhizogonium lindigii]
          Length = 184

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G        +S            K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   PGLTNKIPQLKSNSISQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARK 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 58  AKGSTGEVLLQLLEMRLDNVIFRLGMAPTISGARQLVNHRHILVNDHIVDIPSYRCKPQD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K    + +     ++  +P +++ N         +I   L      + +   
Sbjct: 118 FIIIKDQQKYQTIISKNINFYQKYKIPNHLTYNSLEKKGLVNQI---LDRESIGLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|42556518|gb|AAS19854.1| small ribosomal protein 4 [Wiesnerella sp. He-Nygren 777]
          Length = 177

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 8   INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R     TI  ARQ VNHRH+L+N  +V+I SY CK  DVI +K +SK  + + +
Sbjct: 67  LDNIIFRLGMTSTIPGARQLVNHRHILINNNTVDIPSYNCKPKDVITIKDRSKSQSIITK 126

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ +   +     +I          + +   LVVE+YSR
Sbjct: 127 NLNSFQKQKIPNHLAFDLMQIKGIVNQIIDR---EWISLKINELLVVEYYSR 175


>gi|184127933|gb|ACC67866.1| ribosomal protein small subunit 4 [Christensenia aesculifolia]
          Length = 186

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 16  QSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PT  AARQ VNHRH+LVN R VNI SYRCK  D+I V+ ++     V +  +
Sbjct: 75  ILFRLGMSPTTPAARQLVNHRHILVNNRLVNIPSYRCKPKDIISVRDQTNSQILVKKNLE 134

Query: 159 LAERD-VPEYISV----NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE++++    +++       RI +        + +   LVVE+YSR
Sbjct: 135 SLNKDQIPEHLTLSSLDDNEKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 184


>gi|14090420|gb|AAK53495.1| small ribosomal protein 4 [Mitthyridium obtusifolium]
          Length = 182

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQILLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNSIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ + +   P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NTKFSPKHKTPNHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|162415126|gb|ABX89137.1| ribosomal protein S4 [Didymodon nigrescens]
          Length = 188

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 27  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 85

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +    +++ 
Sbjct: 86  GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNVDFSQKS 145

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 146 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186


>gi|184128011|gb|ACC67905.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 175

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 65  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 124

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++ +    +       RI +        + +   LVVE+YSR
Sbjct: 125 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 173


>gi|32401761|gb|AAP80869.1| small ribosomal protein 4 [Pseudolarix kaempferi]
          Length = 190

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K P +          +    K S + ++   KQK++ +YG ++E++   
Sbjct: 2   RRLKTLPGLTXKRPKHRNDSI----NRSSSRKISQYRIRPXEKQKLRFHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE R D I++R    PTI  ARQ VNH H+ VN   V+I S
Sbjct: 57  YVRIARRAKGSTGQVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  DVI ++ + +  A + +   L +RD +P +++ +         +I         
Sbjct: 117 YPCKPQDVITIRDQQRLRAIIRKNIDLFQRDKLPNHLTFHSLQYKGLINQIIDLN---GI 173

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 174 TLKINELLVVEYYSR 188


>gi|51860581|gb|AAU11427.1| ribosomal protein small subunit 4 [Ephedra major subsp. procera]
          Length = 201

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGD 64
             + KI R +        K P   +     +H   R   K S + + L+ KQK++ +YG 
Sbjct: 1   GPRFKIIRXLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG- 55

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 56  LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVN 115

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATF 179
              V+I SYRCK  D+I +K K  +   +       +       VP Y++ N        
Sbjct: 116 HHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIV 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  +       + ++  LV+E+YSR
Sbjct: 176 NKIIDTKD---LQLKIKEMLVIEYYSR 199


>gi|42556412|gb|AAS19801.1| small ribosomal protein 4 [Frullania tamarisci]
          Length = 191

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+    +     +       K S +   L  KQK++ +YG ++EK+  
Sbjct: 1   IRRLDMLPGLSNKTL---KPKSISIDRSMSNKKISQYRYSLEEKQKLRFHYG-LTEKQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A   +G T   LI  LE RLD I++     PTI  ARQ VNH+H ++N  +VNI 
Sbjct: 57  KYVRIARNIKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY C+ GD+  ++ + K  + +       ++ ++P +++ +   +  +  +    +    
Sbjct: 117 SYNCELGDMYTIRNRQKSKSIITRNMNSFQKLEIPNHLTFDSTQLRGSINQ---RIDCNS 173

Query: 191 YPVIMQPNLVVEFYSR 206
               +   LVVE+YSR
Sbjct: 174 INFKINELLVVEYYSR 189


>gi|74273117|gb|ABA01258.1| ribosomal protein S4 [Passiflora helleri]
          Length = 183

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNNRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPKIYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|162415114|gb|ABX89131.1| ribosomal protein S4 [Aloina obliquifolia]
          Length = 188

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 27  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 85

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +    +++ 
Sbjct: 86  GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 145

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 146 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186


>gi|184128003|gb|ACC67901.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 177

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD 
Sbjct: 8   QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 66

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 67  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 126

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++ +    +       RI +        + +   LVVE+YSR
Sbjct: 127 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 175


>gi|184128069|gb|ACC67934.1| ribosomal protein small subunit 4 [Archangiopteris itoi]
          Length = 183

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S +G++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD 
Sbjct: 14  PSASKKISQYGIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 73  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 132

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++ +    +       RI +        + +   LVVE+YSR
Sbjct: 133 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 181


>gi|184128005|gb|ACC67902.1| ribosomal protein small subunit 4 [Angiopteris evecta]
 gi|184128023|gb|ACC67911.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 181

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD 
Sbjct: 12  QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 71  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 130

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++ +    +       RI +        + +   LVVE+YSR
Sbjct: 131 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 179


>gi|74273207|gb|ABA01303.1| ribosomal protein S4 [Passiflora sanguinolenta]
          Length = 185

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R  +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRAKLPTHLILYPQKYKGLVTQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|37992507|gb|AAR06432.1| small ribosomal protein 4 [Duthiella formosa]
          Length = 188

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  
Sbjct: 1   LGTLPGLTNKTPQLKSSS---INQSTXNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYV 56

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           + A +++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYR
Sbjct: 57  RIARKAKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPSYR 116

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D I +K + K    + +  +  ++  +P +++ +         +I   L      +
Sbjct: 117 CKPQDFITIKNQRKSETIIGKNIEFYQKYKIPNHLTYSSLEKKGLVNQI---LDRESIGL 173

Query: 194 IMQPNLVVEFYS 205
            +   LVV +YS
Sbjct: 174 KINELLVVXYYS 185


>gi|293633977|gb|ADE60368.1| ribosomal protein subunit 4 [Dawsonia superba]
          Length = 177

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 14  NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIF 72

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + K    +++    ++
Sbjct: 73  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIVKNIDFSQ 132

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P ++  NH        +I   L      + +   LVVE+YSR
Sbjct: 133 KYKIPNHLIFNHLERKGLVNQI---LDRESIGLKINELLVVEYYSR 175


>gi|63101025|gb|AAY33137.1| small ribosomal protein 4 [Schoenobryum concavifolium]
          Length = 176

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 7   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K  A + +
Sbjct: 66  LDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSEAIISK 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 126 NIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDCESIGLKINELLVVEYYSR 174


>gi|14090444|gb|AAK53507.1| small ribosomal protein 4 [Calymperes palisotii]
          Length = 182

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++  +  + A +++G T   L+  LE RLD I++R 
Sbjct: 21  KISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K   K    +++    + + 
Sbjct: 80  GIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDHQKYQPMMVKNINFSPKY 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 140 KIPSHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|3098250|gb|AAC15573.1| small ribosomal protein 4 [Spiridens reinwardtii]
          Length = 179

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 10  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMR 68

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K    + +
Sbjct: 69  LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQTIISK 128

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 129 NIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIGLKINELLVVEYYSR 177


>gi|15894757|ref|NP_348106.1| 30S ribosomal protein S4 [Clostridium acetobutylicum ATCC 824]
 gi|26399604|sp|Q97J08|RS4B_CLOAB RecName: Full=Putative 30S ribosomal protein S4 B
 gi|15024424|gb|AAK79446.1|AE007659_1 Ribosomal protein S4 [Clostridium acetobutylicum ATCC 824]
 gi|325508895|gb|ADZ20531.1| 30S ribosomal protein S4 [Clostridium acetobutylicum EA 2018]
          Length = 192

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 15/206 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++    + K+ R +G N++G PK+          L+   ++ K S +G QL  KQK++ 
Sbjct: 1   MARFMGPRFKLARHLGVNVFGHPKA----------LNRGVKQHKLSEYGEQLLEKQKLRA 50

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           YYG + EK+F+ I   A +S+  +   L+  LE RLD +VYR  F  T+  ARQ V+H H
Sbjct: 51  YYGVL-EKQFKKIVFNALKSKEKSEDILVQSLERRLDNLVYRLGFGSTLREARQMVSHGH 109

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           +LVNG+ V+I SY+   GD + ++ KS+++ +           V  YI  + ++     +
Sbjct: 110 ILVNGQKVDIPSYKVNIGDEVSLRSKSRKIQTYASNFTTIIPAV-TYIEKDTESFSGRLI 168

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   K V  PV+++ + V+EFYS+
Sbjct: 169 RLP---KSVEVPVMVKYSKVLEFYSK 191


>gi|74273133|gb|ABA01266.1| ribosomal protein S4 [Passiflora rovirosae]
          Length = 183

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     RD +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKNEQKSKDMIKKSLDSFPRDKLPTHLILYPQKYKGLVNQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|293611998|gb|ADE48443.1| ribosomal protein 4 [Encephalartos hildebrandtii]
 gi|293612004|gb|ADE48446.1| ribosomal protein 4 [Encephalartos villosus]
          Length = 166

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D  
Sbjct: 1   SSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNT 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  DVI V+ + K  A + +   L
Sbjct: 60  IFRLGMTPTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDVITVRDQQKSRAMIDKNIDL 119

Query: 160 AERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEYYSR 164


>gi|14090430|gb|AAK53500.1| small ribosomal protein 4 [Syrrhopodon tortilis]
          Length = 182

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQTMIIK 131

Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++   P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 132 NTNFFSKHKTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|293611980|gb|ADE48434.1| ribosomal protein 4 [Cycas wadei]
          Length = 181

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 9/187 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P  +R+        R+    S + ++   KQK++ +YG ++E++     + A R+
Sbjct: 1   LTNKRP-KSRNDPTNQSSSRK---ISQYRIRPEEKQKLRFHYG-LTERQLLKYVRIAGRA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  DV
Sbjct: 56  KGSTGQILLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRVVDIPSYRCKPRDV 115

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I ++ + +  A + +   L+++D +P +++++         +I  S       + +   L
Sbjct: 116 ITIRDQRRSRAMIGKNLDLSQKDQMPNHLTLHSSQYKGLVNQIIDSK---WISLKINELL 172

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 173 VVEYYSR 179


>gi|81295643|gb|ABB70115.1| ribosomal protein subunit 4 [Ombronesus stuvensis]
          Length = 185

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 1   LPGLTNKILQLKSGSINQ--STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T    +  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  
Sbjct: 58  KTKGSTGEVSLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQ 117

Query: 139 DVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I ++ K      + + +    + ++P +++ +         +I          + +  
Sbjct: 118 DFIIIENKKNYEVVINKNTDFYPKSEIPNHLTYSSLEKKGLVNKIXDR---ESIGLKINE 174

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 175 LLVVEYYSR 183


>gi|74273113|gb|ABA01256.1| ribosomal protein S4 [Passiflora capsularis]
          Length = 185

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAFW-------RSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGRTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRIVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R  +P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRAKLPTHLILYPQKYKGLVNQIIDSK---CVGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INELLVIEYYSR 181


>gi|29422389|gb|AAO84590.1| small ribosomal protein 4 [Philonotis bartramioides]
          Length = 161

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S + ++L  KQK + +YG I+E++  +  + A +++G T   L+  LE RLD +++R  
Sbjct: 1   ISQYRIRLEEKQKXRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-D 163
             PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K  A + +     ++  
Sbjct: 60  MAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYK 119

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 120 IPNHLTYNSLENKGLVNQI---LDRESIGLKINELLVVEYYSR 159


>gi|63191669|gb|AAY34796.1| small ribosomal protein subunit 4 [Pseudopterobryum tenuicuspis]
          Length = 181

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 5/185 (2%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + +I RR+G       K+P    +    ++      K S + ++L  KQK++ +YG
Sbjct: 1   YRGPRVRIIRRLGTLPGLTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG 57

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I+E++  +  + A +++G T   L+   E R D +++R    PTI  ARQ VNHRH+LV
Sbjct: 58  -ITERQLLNYVRIARKAKGSTGEVLLQLPEMRSDNVIFRLGMAPTIPGARQLVNHRHILV 116

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           N   V+I SYRCK  D+I +K + K    +++  +  ++  +P +++ +         +I
Sbjct: 117 NDCIVDIPSYRCKPQDLITIKDQRKSETIIIKNIEFYQKSKIPNHLTYSSLEKKGLVNQI 176

Query: 183 PSSLK 187
                
Sbjct: 177 LXRES 181


>gi|184127993|gb|ACC67896.1| ribosomal protein small subunit 4 [Marattia purpurascens]
          Length = 189

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     + ++     +     K K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 1   LPGLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAG 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVI 194
           D+I V+ ++     V +  +   +D +PE+++++    +       RI +        + 
Sbjct: 119 DIISVRDQTNSRILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|29422409|gb|AAO84600.1| small ribosomal protein 4 [Breutelia tomentosa]
          Length = 184

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 5/184 (2%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGAFPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGGVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R V+I SYRCK  D I +K + K  A + +  +  ++  +P +++ N         +I 
Sbjct: 117 DRIVDIPSYRCKPQDFITIKDQKKSQAIISKNIEFYQKYKIPAHLTYNSLENKGXVNQIL 176

Query: 184 SSLK 187
               
Sbjct: 177 XRES 180


>gi|184127981|gb|ACC67890.1| ribosomal protein small subunit 4 [Marattia attenuata]
          Length = 176

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 7   QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 65

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 66  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 125

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 126 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 174


>gi|37683574|gb|AAQ98838.1| small ribosomal protein 4 [Pogonatum brachyphyllum]
          Length = 171

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 8   NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNIIF 66

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R     TI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + +      +    ++
Sbjct: 67  RLGMAQTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQESQDISAKNIDFSQ 126

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 127 KYKIPNHLTFNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 169


>gi|289599876|gb|ADD12889.1| ribosomal protein S4 [Dillenia parkinsonii]
          Length = 165

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D++ VK + K  A +      +
Sbjct: 60  FRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 163


>gi|184128015|gb|ACC67907.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 182

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD 
Sbjct: 13  QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 72  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 131

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++ +    +       RI +        + +   LVVE+YSR
Sbjct: 132 SLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 180


>gi|74273143|gb|ABA01271.1| ribosomal protein S4 [Passiflora trifasciata]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGQTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INEFLVIEYYSR 181


>gi|289599929|gb|ADD12915.1| ribosomal protein S4 [Hibbertia microphylla]
          Length = 166

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
            R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 1   SRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNI 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      
Sbjct: 60  LFRLGMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDS 119

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 SPHEELPKHLTLHPFQYKGLINQIIDSK---GIGLKINELLVVEYYSR 164


>gi|29422369|gb|AAO84580.1| small ribosomal protein 4 [Anacolia menziesii]
          Length = 180

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRXHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K  A + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 130 NIDFYQKYKIPNHLTYNSLENKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|92417441|gb|ABE76816.1| ribosomal protein subunit 4 [Equisetum fluviatile]
          Length = 192

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           NL G     V ++      + Q  + K S + ++L AKQ+++  YG ++E++  +  + A
Sbjct: 2   NLPGLTNKLVESKKNQASGNDQSNQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIA 60

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
             ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH+LVN R V+I S+ CK 
Sbjct: 61  RCAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSFHCKP 120

Query: 138 GDVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193
            D+I +       + + +  +  A+  +P+++++              + +        +
Sbjct: 121 KDIITIGAPKTYQSIITKRIEAFAKDQIPDHLTLSLSEQKKPKGFVNYLINR---ESIGL 177

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 178 KINELLVVEYYSR 190


>gi|162415092|gb|ABX89120.1| ribosomal protein S4 [Didymodon vinealis]
          Length = 189

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 28  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 86

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +    +++ 
Sbjct: 87  GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITINNRKKSQVMIAKNVGFSQKS 146

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 147 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 187


>gi|14090424|gb|AAK53497.1| small ribosomal protein 4 [Mitthyridium jungquilianum]
          Length = 182

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S +  +L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRXRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKPQDFITIKDQQKYQTMIVK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ + +   P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NTKFSPKHKTPTHLTFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|42556468|gb|AAS19829.1| small ribosomal protein 4 [Noteroclada confluens]
          Length = 191

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+P +               K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRPGTLPGLTSKTPGSKVGSSD---RSTSNKKISQYRIRLEEKQKLRLHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I 
Sbjct: 57  KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGMVPTIPAARQLVNHRHVSINDHIIDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GD+I +  + K       + + L + ++P +++ +    + +  +I        
Sbjct: 117 SYNCKPGDIITINTREKFRLVNWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IYLKINELLVVEYYSR 189


>gi|32879557|emb|CAE11889.1| ribosomal protein S4 [Xenoscapa fistulosa]
          Length = 182

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 10/190 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSL 186
           +I SYRCK  D+I    K +  A +      +  + ++P +++++         +I  S 
Sbjct: 116 DIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQGELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---SIGLKIN 182


>gi|284468543|gb|ADB90332.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|284468545|gb|ADB90333.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|284468547|gb|ADB90334.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 181

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 12  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 70

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 71  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 130

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 131 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 179


>gi|33413259|emb|CAD86764.1| ribosomal protein small subunit 4 [Helicophyllum torquatum]
          Length = 181

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ YYG I+E++  +  + A +++G T   L+  LE R
Sbjct: 12  INQSTSNKKISQYRIRLEEKQKLRFYYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 70

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K    + +
Sbjct: 71  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRVVDIPSYRCKPQDFITIKNRQKSQVVISK 130

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 131 NIDFYQKFKIPNHLTYNSLENKGLVNQI---LNRESIGLKINELLVVEYYSR 179


>gi|73476076|emb|CAE45347.1| ribosomal protein S4 [Melasphaerula ramosa]
          Length = 182

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 10/190 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       K P +       L  Q R  K S + ++L  KQK++ +YG ++E+
Sbjct: 1   FKKIRRLGALPGLTSKRPRSR----SDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V
Sbjct: 56  QLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGGIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSL 186
           +I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S 
Sbjct: 116 DIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|184128021|gb|ACC67910.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 186

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 10/190 (5%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+  + ++       Q    K S + ++L AKQ+++  +G ++E++     + A ++
Sbjct: 1   LTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+
Sbjct: 58  KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 117

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196
           I V+ ++     V +  +   +D +PE+++ +    +       RI +        + + 
Sbjct: 118 ISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDIN 174

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 175 ELLVVEYYSR 184


>gi|116010525|emb|CAL37369.1| ribosomal protein S4 [Sabal minor]
          Length = 182

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK+  +YG ++E
Sbjct: 1   RFKKIRRLGTLPGLTSKRP----KSGSDLKTQLRSGKRSQYRIRLEEKQKLHFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLVRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P++++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|33413159|emb|CAD86716.1| ribosomal protein small subunit 4 [Grimmia calyptrata]
          Length = 183

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I++++  +  + A +++G T   L+  LE R
Sbjct: 14  INQSTSNKKISQYRIRLEKKQKLRFHYG-ITKRQLLNYVRIARKAKGSTGQVLLQLLEMR 72

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 73  LDNVIFRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 132

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 133 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 181


>gi|314906621|gb|ADT61830.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
          Length = 177

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 8   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 67  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 126

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 127 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 175


>gi|305672359|gb|ADM63603.1| ribosomal protein S4 [Diervilla sessilifolia]
          Length = 173

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K+P +    G GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKTPRD----GSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + K    A +  +   + R ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDKQNSRALIQNSLDSSPREELPKHLTLQPFQYKGLVNQIIDS 172


>gi|14090506|gb|AAK53538.1| small ribosomal protein 4 [Exodictyon incrassatum]
          Length = 183

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 5/177 (2%)

Query: 31  SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLIS 90
           S    ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+ 
Sbjct: 9   SKASSINQSISNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARKVKGSTGQVLLQ 67

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150
            LE RLD I++R    PTI  ARQ VNHRH+LVN R+VNI SY+CK  D+I +K + K  
Sbjct: 68  LLEMRLDNIIFRFGLAPTIPGARQLVNHRHILVNNRTVNIPSYQCKPQDLITIKDQQKYQ 127

Query: 151 ASVLEASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +++ +    +  +P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 128 TMIVKNTNFFPKSKIPNHLIFNSAEKKGLVNQI---LDKESIGLKINELLVVEYYSR 181


>gi|108861128|gb|ABG21436.1| ribosomal protein small subunit 4 [Regnellidium diphyllum]
          Length = 195

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 11/199 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K+     +       Q    K S F ++L AKQ+++  YG ++E++   
Sbjct: 1   RRLKSLPGLTGKASNPRETRV--AADQSTSKKISQFCVRLEAKQRLRFNYG-VTERQLLR 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T    +  LE RLD +V++    PTI AARQ VNHRH+ VN R V++ S
Sbjct: 58  YVRIARKTKGSTGQVPLQLLEMRLDNVVFQLGLAPTIPAARQLVNHRHISVNDRIVDVPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYIS---VNHDNMVATFVRIPSSLK 187
           YRC+  D+I V+ +      +      + R   +P+++S   +  +       ++ +   
Sbjct: 118 YRCEPQDIITVRNRPTSCNVLKGGIFESSRGNQIPDHLSLSVLEGNKPRGLVNQVVNRD- 176

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 177 --SIDLNINELLVVEYYSR 193


>gi|124021090|gb|ABM88818.1| small ribosomal protein subunit 4 [Aneura pinguis]
          Length = 189

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 9/195 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+P +               K S + ++L  KQK++ +YG ++E++  
Sbjct: 2   IRRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I 
Sbjct: 58  KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY CK GDVI +  + K     + + Q  +  +P +++ +    V +  +I         
Sbjct: 118 SYNCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 YLKINELLVVEYYSR 187


>gi|184127937|gb|ACC67868.1| ribosomal protein small subunit 4 [Marattia laevis]
          Length = 181

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 12  QSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ +      V +  +
Sbjct: 71  IIFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQPNSQILVKKNLE 130

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 131 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 179


>gi|32401771|gb|AAP80874.1| small ribosomal protein 4 [Cathaya argyrophylla]
          Length = 189

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 9/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR         K P   R     L  +    K S + ++   KQK++ +YG ++E++   
Sbjct: 1   RRPKTLPGLLXKDPKKERI----LSNRSSSRKISQYRIRSEEKQKLRFHYG-LTERQLLK 55

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I+++    PTI  ARQ VNH H+ VN   V+I S
Sbjct: 56  YVRIARRAKGSTGQVLLQLLEMRLDNILFQLGMAPTIPGARQLVNHGHIQVNDHMVDIPS 115

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK  DVI ++ + +  A + +   L +R+ +P +++ +         +I  S      
Sbjct: 116 YPCKPQDVITIRDQQRLRAIIRKNIDLFQRNKLPNHLTFHSLQCKGFINQIIDSK---WI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 173 SLKINELLVVEYYSR 187


>gi|17154619|emb|CAC83922.1| ribosomal protein S4 [Ferraria crispa]
          Length = 182

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 56  RQLLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +  A +          ++P +++++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKQRSKALIQNYIASSPHEELPNHLTIDPIQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|305672377|gb|ADM63612.1| ribosomal protein S4 [Valeriana officinalis]
          Length = 173

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KSP+   S    L  Q    K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKSPIKRSS----LRNQSSSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  +++P+++++          +I  S
Sbjct: 116 IPSYRCKPHDIITARDEQNSRALIQNSLDSSPHKELPKHLTLQSFQYKGLVNQIIDS 172


>gi|89147824|gb|ABD62760.1| ribosomal protein 4 [Cavicularia densa]
          Length = 177

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           L+      K S + ++L  KQK++ +YG I+E++     + A +++G T   L+  LE R
Sbjct: 8   LNQSTSNKKVSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARKAKGSTGQILLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+L+N  +V+I SY CK  D+I +K + K  + + +
Sbjct: 67  LDNIIFRLGMAPTIPGARQLVNHRHILINNNTVDIPSYNCKPXDIITIKNRQKSQSIITK 126

Query: 156 ASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +           + +   LVVE+YSR
Sbjct: 127 NLKSFQKSQIPNHLTFDLMQFKGLVNQKIDR---EFINLKINELLVVEYYSR 175


>gi|67035943|gb|AAY62898.1| small ribosomal protein subunit 4 [Leptodon smithii]
          Length = 183

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+     S    ++      K S + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   GLTNKTSQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 57  AKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K    + +  +L ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNQRKSETIISKNIELYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|184128025|gb|ACC67912.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 187

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G     + ++     +  Q    K S + ++L AKQ+++  +G ++E++     + A ++
Sbjct: 1   GLTNKTLKSKKAQIAID-QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKA 58

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+
Sbjct: 59  KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 118

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196
           I V+ ++     V +  +   +D +PE+++ +    +       RI +          + 
Sbjct: 119 ISVRDQTNSQILVKKNLESLNKDQIPEHLTFSSLEDNKPQGFVNRIVTRD---SIGWDIN 175

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 176 ELLVVEYYSR 185


>gi|289599905|gb|ADD12903.1| ribosomal protein S4 [Hibbertia conspicua]
          Length = 163

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ER 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSLHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P+++++          +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLALQPFQYKGLVNQIIDSK---WIGLKINELLVVEYYSR 161


>gi|90970054|gb|ABE02796.1| ribosomal protein S4 [Passiflora leptoclada]
          Length = 183

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRFGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INEFLVIEYYSR 181


>gi|320455028|dbj|BAJ65661.1| small ribosomal protein 4 [Metzgeria pubescens]
          Length = 187

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKLKSSY---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +    + +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175

Query: 187 KDVPYPVIMQPNLV 200
                 + +   LV
Sbjct: 176 --EWIDLKINELLV 187


>gi|314906619|gb|ADT61829.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 176

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 7   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 66  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 125

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 126 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 174


>gi|314906409|gb|ADT61777.1| ribosomal protein subunit 4 [Scleropodium cespitans]
 gi|314906533|gb|ADT61787.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906535|gb|ADT61788.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906537|gb|ADT61789.1| ribosomal protein subunit 4 [Scleropodium cespitans]
 gi|314906541|gb|ADT61790.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906543|gb|ADT61791.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906545|gb|ADT61792.1| ribosomal protein subunit 4 [Scleropodium cespitans]
 gi|314906547|gb|ADT61793.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906549|gb|ADT61794.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906553|gb|ADT61796.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906555|gb|ADT61797.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906557|gb|ADT61798.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906559|gb|ADT61799.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906561|gb|ADT61800.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906563|gb|ADT61801.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906565|gb|ADT61802.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906567|gb|ADT61803.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906569|gb|ADT61804.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906571|gb|ADT61805.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906573|gb|ADT61806.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906577|gb|ADT61808.1| ribosomal protein subunit 4 [Scleropodium cespitans]
 gi|314906579|gb|ADT61809.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906581|gb|ADT61810.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906583|gb|ADT61811.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906585|gb|ADT61812.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906587|gb|ADT61813.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906589|gb|ADT61814.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906591|gb|ADT61815.1| ribosomal protein subunit 4 [Scleropodium cespitans]
 gi|314906593|gb|ADT61816.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906595|gb|ADT61817.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906597|gb|ADT61818.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906601|gb|ADT61820.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906603|gb|ADT61821.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906605|gb|ADT61822.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906607|gb|ADT61823.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906609|gb|ADT61824.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906611|gb|ADT61825.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906613|gb|ADT61826.1| ribosomal protein subunit 4 [Scleropodium julaceum]
 gi|314906615|gb|ADT61827.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906617|gb|ADT61828.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906623|gb|ADT61831.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906625|gb|ADT61832.1| ribosomal protein subunit 4 [Scleropodium cespitans]
 gi|314906627|gb|ADT61833.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906629|gb|ADT61834.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906631|gb|ADT61835.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906637|gb|ADT61837.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906641|gb|ADT61839.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
 gi|314906645|gb|ADT61841.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906647|gb|ADT61842.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906649|gb|ADT61843.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906651|gb|ADT61844.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906653|gb|ADT61845.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906655|gb|ADT61846.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906657|gb|ADT61847.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906659|gb|ADT61848.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906661|gb|ADT61849.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906663|gb|ADT61850.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906665|gb|ADT61851.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906667|gb|ADT61852.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906669|gb|ADT61853.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906671|gb|ADT61854.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906673|gb|ADT61855.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906675|gb|ADT61856.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906677|gb|ADT61857.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906679|gb|ADT61858.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906681|gb|ADT61859.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906683|gb|ADT61860.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906685|gb|ADT61861.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906687|gb|ADT61862.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906690|gb|ADT61863.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906692|gb|ADT61864.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906694|gb|ADT61865.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906696|gb|ADT61866.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906698|gb|ADT61867.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906700|gb|ADT61868.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906702|gb|ADT61869.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906704|gb|ADT61870.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906706|gb|ADT61871.1| ribosomal protein subunit 4 [Scleropodium touretii]
 gi|314906708|gb|ADT61872.1| ribosomal protein subunit 4 [Scleropodium sp. B (BEC-2010)]
 gi|314906710|gb|ADT61873.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 180

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|184128055|gb|ACC67927.1| ribosomal protein small subunit 4 [Angiopteris lygodiifolia]
          Length = 186

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 10/190 (5%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+  + ++       Q    K S + ++L AKQ+++  +G ++E++     + A ++
Sbjct: 1   LTNKTLKSKKAQI--AIDQSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+
Sbjct: 58  KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 117

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196
           I V+ ++     V +  +   +D +PE+++++    +       RI +        + + 
Sbjct: 118 ISVRDQTNSQILVKKNLESLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLDIN 174

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 175 ELLVVEYYSR 184


>gi|108861100|gb|ABG21422.1| ribosomal protein small subunit 4 [Marsilea nashii]
 gi|108861114|gb|ABG21429.1| ribosomal protein small subunit 4 [Marsilea schelpeana]
          Length = 196

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E++  
Sbjct: 1   IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ 
Sbjct: 58  RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186
           SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++    
Sbjct: 118 SYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---A 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           K     + +   L+VE+YSR
Sbjct: 175 KRESMDLNINELLIVEYYSR 194


>gi|314906551|gb|ADT61795.1| ribosomal protein subunit 4 [Scleropodium californicum]
 gi|314906575|gb|ADT61807.1| ribosomal protein subunit 4 [Scleropodium californicum]
 gi|314906599|gb|ADT61819.1| ribosomal protein subunit 4 [Scleropodium californicum]
          Length = 180

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN  +V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCTVDIPSYRCKPQDFITIKNQRKSETIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|29422365|gb|AAO84578.1| small ribosomal protein 4 [Breutelia polygastrica]
          Length = 180

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 5/162 (3%)

Query: 46  SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105
           S + ++L   QK++ +YG I+E++  +    A +++G T   L+  LE RLD +++R   
Sbjct: 21  SQYRIRLEENQKLRFHYG-ITERQLLNYDGIARKAKGSTGEVLLQLLEMRLDNVIFRLGM 79

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164
            PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K  A + +     ++  +
Sbjct: 80  APTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKI 139

Query: 165 PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 140 PNHLTYNSLENKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|108861118|gb|ABG21431.1| ribosomal protein small subunit 4 [Marsilea vestita]
          Length = 196

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E++  
Sbjct: 1   IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ 
Sbjct: 58  RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186
           SYRC+  D+I ++ +      +      + R  ++P+++S   +  +       ++    
Sbjct: 118 SYRCEPQDIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---A 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           K     + +   L+VE+YSR
Sbjct: 175 KRESMDLNINELLIVEYYSR 194


>gi|77862519|gb|ABB04532.1| small ribosomal protein 4 [Conocephalum japonicum]
          Length = 181

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 7/185 (3%)

Query: 23  PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82
               + ++S         +K   S + ++L  KQK++ +YG ++E++     + A +++G
Sbjct: 1   TNKTLKSKSGYINQSISNKK--VSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKG 57

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
            T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I SY CK  D+I 
Sbjct: 58  STGQVLLQLLEMRLDNIIFRLGMTPTIPGARQLVNHRHILINNITVDIPSYNCKPKDIIT 117

Query: 143 VKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201
           +K + K  + + +  +  ++  +P ++S +   +     +I          + +   LVV
Sbjct: 118 IKDRQKSQSIITKNLKSFQKPKIPNHLSFDLIQIKGLVNQIIDR---EWIYLKINELLVV 174

Query: 202 EFYSR 206
           E+YSR
Sbjct: 175 EYYSR 179


>gi|37992449|gb|AAR06403.1| small ribosomal protein 4 [Camptochaete pulvinata]
          Length = 157

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 5/159 (3%)

Query: 49  GLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108
            ++L  KQK++ +YG I+E++  +  + A R++G T   L+   E RLD +++R    PT
Sbjct: 1   RIRLEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGEVLLQLPEMRLDNVIFRLGMAPT 59

Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEY 167
           I  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +
Sbjct: 60  IPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKSKIPNH 119

Query: 168 ISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ N         +I   L      + +   LVVE+YSR
Sbjct: 120 LTYNSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 155


>gi|27227943|gb|AAN85769.1| ribosomal protein subunit 4 [Bryum gemmiferum]
          Length = 164

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++
Sbjct: 1   NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNIIF 59

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A + +   L +
Sbjct: 60  RLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPEDSITIKDRQKSQAIISKNLNLYQ 119

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 120 KYKTPNHLTYNFLKKKGLVNQI---LDRESIGLKINELLVVEYYSR 162


>gi|305672337|gb|ADM63592.1| ribosomal protein S4 [Cuttsia viburnea]
          Length = 173

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E +
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTEGQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +  + +P +++++     A   +I  S
Sbjct: 116 IPSYRCKPQDTITARDEQKSRALIQNSLDSSPHEKLPNHLTLHPFQYKALVNQIIDS 172


>gi|305672243|gb|ADM63545.1| ribosomal protein S4 [Cyphia decora]
          Length = 173

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KSP +    G     Q    K S + L+L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKSPRD----GSDPRNQSGYGKKSQYRLRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  K + K  A +  +       ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDTITAKDEQKSKALIQNSLDSFPHEELPKHLTLDPVQYKGLVNQIIDS 172


>gi|90970056|gb|ABE02797.1| ribosomal protein S4 [Passiflora micropetala]
          Length = 183

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INEFLVIEYYSR 181


>gi|305672237|gb|ADM63542.1| ribosomal protein S4 [Linnaea borealis]
          Length = 173

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPNHLTLQSFQYKGLVNQIIDS 172


>gi|78102627|gb|ABB21527.1| small ribosomal protein 4 [Plagiochila andina]
          Length = 183

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 8/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNH+H+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHKHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR- 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 --EWTNLKIN 183


>gi|117306756|emb|CAH73347.1| ribosomal protein S4 [Sematophyllum sp. Sg129]
 gi|117306758|emb|CAH73348.1| ribosomal protein S4 [Sematophyllum sp. Sg129]
          Length = 183

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 57  AKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDSMVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K    + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNQRKSETIINKNIEFYQKSKIPNHLTYSSLEKKGLXNQI---LDRESIDLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|254995575|emb|CAO82746.1| ribosomal protein S4 [Lycopodium deuterodensum]
          Length = 172

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 6   STPNKKVSQYCIRLEEKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + +S+  A + + ++
Sbjct: 65  IIFRLGMAPTIPGARQLVNHKHILVNNRAINVPSYRCKPKDIITTRDRSESRAIIAKNNK 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++   +P ++++          +I          + +   LVVE+YSR
Sbjct: 125 FSQTYKIPNHLTLYSLQNKGLVNKIIDR---ELIDLNINELLVVEYYSR 170


>gi|314906643|gb|ADT61840.1| ribosomal protein subunit 4 [Scleropodium cespitans]
          Length = 180

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|3098234|gb|AAC15565.1| small ribosomal protein 4 [Braithwaitea sulcata]
          Length = 184

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G        +S            K S + ++L  KQK++ +YG I E++  +  + A +
Sbjct: 1   PGLTNKTSQLKSSSINQ--STSNKKISQYRIRLEEKQKLRFHYGII-ERQLLNYVRIARK 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 58  AKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A + +     ++  +P +++ +         +I   L      + +   
Sbjct: 118 FITIKNRQKSQAIINKNIDFYQKYKIPNHLTYSSLEKKGFVNQI---LDRESIGLKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|46811012|gb|AAT01824.1| small ribosomal protein 4 [Hattorianthus erimonus]
          Length = 180

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 49/166 (29%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K + + ++L  KQK++ +YG ++E++     + A  ++G T   L+  LE RLD IV 
Sbjct: 17  NRKITQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARSAKGSTGQILLQLLEMRLDNIVS 75

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA- 160
           R    PTI  ARQ VNHRH+++N  +V+I SY C+  DVI ++ + +    +     L+ 
Sbjct: 76  RLGMAPTIPGARQLVNHRHIVINDSTVDIPSYSCEPRDVITIRDRQESRLIIARNMDLSQ 135

Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ER +P +++++  +   +  ++          + +   L+VE++SR
Sbjct: 136 ERKIPNHLTLDSTHFRGSINQVIDR---EWIDLKINELLIVEYHSR 178


>gi|74273147|gb|ABA01273.1| ribosomal protein S4 [Passiflora vespertilio]
          Length = 185

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP    ++        R  + S + ++L  KQK++ +YG ++E++     +
Sbjct: 1   GALPGLTSKSPRVGSAF-------SRSGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVR 52

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRC
Sbjct: 53  IAAKAKGPTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRC 112

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I VK + K    + ++     R ++P ++ +          +I  S       + 
Sbjct: 113 KPRDLITVKDEQKSKDMIKKSLDSFPRNNLPTHLILYPQKYKGLVTQIIDSK---CLGLK 169

Query: 195 MQPNLVVEFYSR 206
           +   LV+E+YSR
Sbjct: 170 INEFLVIEYYSR 181


>gi|299008296|gb|ADJ00109.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008298|gb|ADJ00110.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008300|gb|ADJ00111.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008302|gb|ADJ00112.1| small ribosomal protein 4 [Radula lindenbergiana]
          Length = 184

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     +  +     +       K S + ++L  KQK++ +YG ++EK+     + A  
Sbjct: 1   PGLSNKTL--KPKSISIDRSLSNKKISQYRIRLEEKQKLRFHYG-LTEKQLLKYVRIARN 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
            +G T   LI  LE RLD I++     PTI  ARQ VNH+H ++N  +VNI SY C+ GD
Sbjct: 58  IKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIPSYNCELGD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I V+ + K  + + +   L ++ ++P +++ +   +  +  +    +        +   
Sbjct: 118 IITVRNRHKSKSIITKNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDYNSINFKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|314906529|gb|ADT61785.1| ribosomal protein subunit 4 [Brachythecium frigidum]
 gi|314906531|gb|ADT61786.1| ribosomal protein subunit 4 [Brachythecium asperrimum]
          Length = 180

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T    +  LE R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVSLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIIDK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|108861112|gb|ABG21428.1| ribosomal protein small subunit 4 [Marsilea quadrifolia]
          Length = 196

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E++  
Sbjct: 1   IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ 
Sbjct: 58  RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186
           SYRC+  D+I V+ +      +      + R  ++P+++S   +  +       ++    
Sbjct: 118 SYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---A 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           K     + +   L+VE+YSR
Sbjct: 175 KRESMDLNINELLIVEYYSR 194


>gi|42556460|gb|AAS19825.1| small ribosomal protein 4 [Metzgeria conjugata]
          Length = 183

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+  +  SY   +       K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTERQLLKYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   V+I SY C+ GD
Sbjct: 57  TKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDIVDIPSYNCELGD 116

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I +K + +  + ++E     ++  +P ++  +   ++ +  R+ +        + +   
Sbjct: 117 IITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKLIGSVNRMINR---EWIDLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|14090448|gb|AAK53509.1| small ribosomal protein 4 [Octoblepharum albidum]
          Length = 182

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 21  KVSQYRIRLEEKQKLRFHYG-LTEQQLLNYMRIARKAKGSTGQVLLQLLEMRLDNVIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHR++LVN   VNI SYRCK  DVI +K +      +++  +  ++ 
Sbjct: 80  GMAPTIPGARQLVNHRYILVNNCIVNIPSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKY 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P ++S N         +I   L      + +   LVVE+YSR
Sbjct: 140 KIPNHLSFNALEKKGLVKQI---LDQEFVGLKINELLVVEYYSR 180


>gi|78102673|gb|ABB21550.1| small ribosomal protein 4 [Plagiochila hookeriana]
          Length = 172

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 5/176 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           V+I SY C+ GD+I ++ K K  +++ +     ++  +P +++ +   +  +  ++
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSAITKNINSFQKLKIPSHLTFDSTQLRGSVNQM 172


>gi|46811016|gb|AAT01826.1| small ribosomal protein 4 [Hymenophyton leptopodum]
          Length = 176

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE RLD 
Sbjct: 7   STANKKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARRAKGSTGQILLQLLEMRLDN 65

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+R    PTI  ARQ VNHRH+ +N   V+I SY CK  DVI    + +    +     
Sbjct: 66  IVFRLGMAPTIPGARQLVNHRHIPINDDMVDIPSYNCKPEDVITTGNRRESRLIITRNIN 125

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  +P +++ +      +  ++          + +   LVVE+YSR
Sbjct: 126 LFQKQKIPNHLTFDSTQFRGSVNQMIDR---ECINLKINELLVVEYYSR 171


>gi|305672219|gb|ADM63533.1| ribosomal protein S4 [Abelia x grandiflora]
          Length = 173

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIIMARDEQNSRALIQNSLDSSPHEELPKHLTLQSFQYKGLVNQIIDS 172


>gi|305672193|gb|ADM63520.1| ribosomal protein S4 [Dipelta yunnanensis]
 gi|305672341|gb|ADM63594.1| ribosomal protein S4 [Kolkwitzia amabilis]
 gi|305672353|gb|ADM63600.1| ribosomal protein S4 [Centranthus ruber]
          Length = 173

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPKHLTLQSFQYKGLVNQIIDS 172


>gi|125662686|gb|ABN50293.1| small ribosomal protein 4 [Thujopsis dolabrata]
          Length = 203

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + KI  R+   L G  K   N R   P      +  KPS + ++L+ KQ+++ +YG 
Sbjct: 1   RGPRFKIINRLKT-LPGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQRLRFHYG- 57

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           + E++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 58  LPERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVN 117

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISV--NHDNMVATF 179
           GR V+I SYRCK  D+I +K+K   +  + +   + ++D   VP +++         A  
Sbjct: 118 GRIVDIPSYRCKPQDLISIKEKQGLINIINKNRDIFKKDNMRVPPHLNWINKKSQYSALV 177

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  + +     + +   LVVE+YSR
Sbjct: 178 NKIIDNKR---IGLKINELLVVEYYSR 201


>gi|86438884|emb|CAJ55419.1| small ribosomal protein 4 [Plagiochila dependula]
          Length = 176

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 5/180 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+G       K+  +  +Y   +       K S + ++L  KQK   
Sbjct: 1   MSRYRGPRVKIIRRLGALPGLTSKTLESKSNY---IDRSTSNKKVSQYRIRLEEKQKXXX 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD         PTI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTXXXXGMSPTIPGARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           + +N   V+I SY C+ GD+I +  K K  + V +     ++  +P ++  +   +  + 
Sbjct: 117 ISINNDIVDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLIFDSTQLRGSV 176


>gi|314906413|gb|ADT61779.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 180

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|311223016|gb|ADP76590.1| small ribosomal protein 4 [Pellia neesiana]
          Length = 189

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 8/195 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+G       K  +   S   G     +K   S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRLGALPGLTSK-ILELESGYIGQSTPNKK--VSQYRIRLEEKQKLRFHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L   LE RLD I++R    PTI  ARQ VNHRH+L+N  +V+I 
Sbjct: 57  KYVRIARKAKGSTGQILSQPLEMRLDNIIFRLGMSPTIPGARQLVNHRHILINDDTVDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY C+  DVI V  + K+   +       +  VP +++ +      +  +          
Sbjct: 117 SYNCEPKDVITVNNR-KESVIIKNMDSSRKPKVPNHLTFDSIRFRGSVNQTIDR---EFI 172

Query: 192 PVIMQPNLVVEFYSR 206
            + +   L VE+YSR
Sbjct: 173 DLKINELLGVEYYSR 187


>gi|293612012|gb|ADE48450.1| ribosomal protein 4 [Macrozamia moorei]
          Length = 179

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)

Query: 25  SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
               +R+        R+    S + ++L  KQK++ +YG ++E++     + A R++G T
Sbjct: 2   KRPKSRNDPTNQSSSRK---ISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGST 57

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              L+  LE R D  ++R    PTI  ARQ VNHRH+LVN R V+I  YRCK  DVI V+
Sbjct: 58  GQVLLQLLEMRSDNTIFRLGMAPTIPGARQLVNHRHILVNDRVVDIPGYRCKPRDVITVR 117

Query: 145 QKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
            + K  A + +   L+++D +  +++++         +I  S       + +   LVVE+
Sbjct: 118 DQQKSRAMIEKNIDLSQKDQMSNHLTLHSSRYKGLVNQIIDSK---WISLKINELLVVEY 174

Query: 204 YSR 206
           YSR
Sbjct: 175 YSR 177


>gi|289599870|gb|ADD12886.1| ribosomal protein S4 [Dillenia alata]
 gi|289599881|gb|ADD12891.1| ribosomal protein S4 [Dillenia suffruticosa]
          Length = 163

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D++ VK + K  A +      +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSSPHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 161


>gi|305672347|gb|ADM63597.1| ribosomal protein S4 [Acicarpha tribuloides]
          Length = 173

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172


>gi|162415104|gb|ABX89126.1| ribosomal protein S4 [Syntrichia norvegica]
          Length = 188

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 27  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 85

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +  + K    + +    +++ 
Sbjct: 86  SMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFSQKS 145

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 146 KIPNHLTFNFLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186


>gi|32401759|gb|AAP80868.1| small ribosomal protein 4 [Stangeria eriopus]
          Length = 169

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 2   NQSSSRKISQYRVRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSD 60

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             ++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  DVI V+ +    + + +  
Sbjct: 61  NTIFRLGMAPTIPGARQLVNHRHILVNDCVVDIPSYRCKPLDVITVRNQQGLRSMIDKNL 120

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L+++D +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 121 NLSQKDQMPNHLTLHSSRYKGLVNQIIDSK---WISLKVNELLVVEYYSR 167


>gi|17154597|emb|CAC83837.1| ribosomal protein S4 [Ixia latifolia]
          Length = 183

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG +++
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGSDLKNQLRSGKKSQYRIRLEKKQKLRFHYG-LTK 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|289599879|gb|ADD12890.1| ribosomal protein S4 [Dillenia retusa]
          Length = 165

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D++ VK + K  A +      +
Sbjct: 60  FRLGMAXTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 163


>gi|320455026|dbj|BAJ65660.1| small ribosomal protein 4 [Metzgeria kinabaluensis]
          Length = 187

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     S    +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKLKSSS---IDRSAPNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P ++  +    + +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSLQKPGIPNHLVFDSTKFIGSVNRMINR- 175

Query: 187 KDVPYPVIMQPNLV 200
                 + +   LV
Sbjct: 176 --EWIDLEINELLV 187


>gi|53830734|gb|AAU95216.1| small ribosomal protein 4 [Syrrhopodon banksii]
 gi|53830744|gb|AAU95221.1| small ribosomal protein 4 [Syrrhopodon banksii]
 gi|53830746|gb|AAU95222.1| small ribosomal protein 4 [Syrrhopodon banksii]
 gi|53830748|gb|AAU95223.1| small ribosomal protein 4 [Syrrhopodon banksii]
 gi|53830750|gb|AAU95224.1| small ribosomal protein 4 [Syrrhopodon borneensis]
 gi|53830752|gb|AAU95225.1| small ribosomal protein 4 [Syrrhopodon borneensis]
 gi|53830754|gb|AAU95226.1| small ribosomal protein 4 [Syrrhopodon borneensis]
          Length = 177

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD 
Sbjct: 11  STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++ + 
Sbjct: 70  IIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFITIKDQQKYQTMIVKNTN 129

Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +++  P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 130 FFSKQKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175


>gi|49182694|gb|AAT57809.1| small ribosomal protein [Aneura mirabilis]
 gi|124021080|gb|ABM88813.1| small ribosomal protein subunit 4 [Aneura mirabilis]
          Length = 191

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+P                 K S + ++L  KQK++ +YG ++E++  
Sbjct: 1   IRRPGTLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I 
Sbjct: 57  KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GDVI +  + K            ++ ++P +++ +    + +  +I        
Sbjct: 117 SYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 174 IDLKINELLVVEYYSR 189


>gi|146261553|gb|ABQ15086.1| ribosomal protein S4 [Choristylis rhamnoides]
          Length = 162

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++ ++     + A +++G T   L+  LE  LD I++R 
Sbjct: 1   KRSQYRIRLXXKQKLRFHYG-LTXRQLLKYVRIAGKAKGSTGQVLLQLLEMXLDNIJFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNH H+LVNGR V+I SYRCK  D+I  + + K  A +      +   
Sbjct: 60  GMASTIPGARQLVNHXHILVNGRIVDIPSYRCKPRDIITARDEQKSRAXIQNYLDSSPHE 119

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  +       + +   LVVE+YSR
Sbjct: 120 ELPKHLTLHPFQYKGLVNQIIDTK---WVGLKINELLVVEYYSR 160


>gi|116517480|gb|ABJ99094.1| ribosomal protein subunit 4 [Orthotrichum assimile]
          Length = 177

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD 
Sbjct: 11  STSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H++VN R V+I SYRCK  D I +K + K    + +   
Sbjct: 70  IIFRLGMAPTIPGARQLVNHKHIIVNHRIVDIPSYRCKPQDFITIKNRQKSQDIITKNID 129

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  +P +++ N         +I          + +   LVVE+YSR
Sbjct: 130 FNQKYKIPNHLTYNSLEKKGFVNQILDRK---LIGLKINELLVVEYYSR 175


>gi|305672211|gb|ADM63529.1| ribosomal protein S4 [Alseuosmia macrophylla]
          Length = 173

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPLDTITARDEQKSRALIQNSLDSSPHEELPKHLTLHSFQYKGLVNQIIDS 172


>gi|162415122|gb|ABX89135.1| ribosomal protein S4 [Tortula laureri]
          Length = 186

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 5/163 (3%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S + ++L  KQK++ +YG I+E +  +  + A +++G T   L+  LE RLD +++R  
Sbjct: 26  ISQYRIRLEEKQKLRFHYG-ITEXQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRLG 84

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-D 163
              TI  ARQ VNHRH+LVN   VNI SYRCK  D I +  + K    + +     ++  
Sbjct: 85  MAXTIPGARQLVNHRHILVNXXIVNIPSYRCKPQDFITINDRKKSQVMITKNVDFXQKSK 144

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 145 IPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 184


>gi|18027952|gb|AAL55900.1| ribosomal protein S4 [Syngramma quinata]
          Length = 191

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 2/189 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K   +          Q    K S F ++L  KQK++  YG ++E++     + A
Sbjct: 3   LPGLTGKDKTSNSGDFRVASEQSASEKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            ++RG T   L+  LE RLD I++R     TI AARQ VNHRH+LVNG  V+I SYRCK 
Sbjct: 62  RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGCIVDIPSYRCKP 121

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
            D+I ++++      V +A  +    +P++++++          +          + +  
Sbjct: 122 KDIITIRKRPISHT-VAKAEFIGRDGIPDHLTLSFSKAGEQVGLVNHMANRESVDLEINE 180

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 181 LLVVEYYSR 189


>gi|305672259|gb|ADM63553.1| ribosomal protein S4 [Weigela hortensis]
          Length = 173

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P +    G GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRPRD----GSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITPRDEQNSRALIQNSLDSSPHEELPKHLTLQPFQYKGLVNQIIDS 172


>gi|168704700|ref|ZP_02736977.1| 30S ribosomal protein S4 [Gemmata obscuriglobus UQM 2246]
          Length = 196

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 10/196 (5%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K DR  G      PK P++ +   PG+HG RR     Y G++LR KQK+K++YG + E 
Sbjct: 5   LKGDRCFG------PKCPIDKQKPPPGMHGLRRSKTSEY-GIRLREKQKLKRFYGVL-EA 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +FR  +  A ++ G+T   L+S LE RLD +V+R  F     +ARQ V+H H+LVNG   
Sbjct: 57  QFRRYYGLATKAVGNTGEQLLSILERRLDNVVHRLGFAVNRTSARQMVSHGHILVNGVKC 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV--NHDNMVATFVRIPSSL 186
           +I S   K GDVI+VK +   L    +        +P+++ +    D       R P+  
Sbjct: 117 DIASMLVKPGDVIKVKTRDSSLKMARDTLAKGTVRIPDFLELTGTQDQPEGRMNRTPTRQ 176

Query: 187 KDVPYPVIMQPNLVVE 202
                   ++  L++E
Sbjct: 177 DVDERITDIREQLIIE 192


>gi|305672363|gb|ADM63605.1| ribosomal protein S4 [Nymphoides peltata]
          Length = 173

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  + +  +   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTITARDEQKSRSLIQNSIDSSPHDELPNHLTLHPFQYKGLVNQIIDS 172


>gi|162415116|gb|ABX89132.1| ribosomal protein S4 [Aloina cornifolia]
          Length = 188

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 27  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 85

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +  + K    + +     ++ 
Sbjct: 86  GMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKSQDFITINDRKKSQVMITKNVDFFQKS 145

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 146 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 186


>gi|124021082|gb|ABM88814.1| small ribosomal protein subunit 4 [Aneura mirabilis]
          Length = 192

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR G       K+P                 K S + ++L  KQK++ +YG ++E++  
Sbjct: 2   IRRPGTLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I 
Sbjct: 58  KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GDVI +  + K            ++ ++P +++ +    + +  +I        
Sbjct: 118 SYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 174

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 175 IDLKINELLVVEYYSR 190


>gi|14090436|gb|AAK53503.1| small ribosomal protein 4 [Calymperes tahitense]
          Length = 182

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD I++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKIKGSTGQVLLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++    + 
Sbjct: 78  RLGIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQKIIIKNVNFSP 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ N         ++   L      + +   LVVE+YSR
Sbjct: 138 KYKIPRHLTFNSVEKKGLVNQL---LDQESIGLKINELLVVEYYSR 180


>gi|16565353|gb|AAL26195.1|AF313588_1 small ribosomal protein 4 [Psilotum nudum]
          Length = 229

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 36/231 (15%)

Query: 8   KHKIDRRIGENLWGR--------------------PKSPVNTRSYGPGLHG--------Q 39
           + KI RR+                            K   +                  Q
Sbjct: 1   RLKIIRRLNHLPGLTKKKLKLKKVESDQSKMESDQSKVESDQSKMESDQSKVESDQSISQ 60

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S + L+L AKQ+++  YG ++E++       A ++RG T   L+  LE RLD I
Sbjct: 61  STSKKRSQYSLRLEAKQRLRFNYG-VTERQLLKYVCIAKKARGSTGQVLLQLLEMRLDNI 119

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R    PTI  ARQ VNHRH+LVN + V+I SYRCK  D+I V+   K    +    +L
Sbjct: 120 IFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSYRCKPNDIITVRDHQKSQELIKRNIKL 179

Query: 160 AE-RDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A+  ++P +++   +          +I          + +   LVVE+YSR
Sbjct: 180 AKIDEIPSHLNISYLEETKPKGFINKIVDRG---SIGLEINELLVVEYYSR 227


>gi|14090450|gb|AAK53510.1| small ribosomal protein 4 [Octoblepharum albidum]
          Length = 182

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 21  KVSQYRIRLEEKQKLRFHYG-LTEQQLLNYMRVARKTKGSTGQVLLQLLEMRLDNVIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI AARQ VNHR++LVN   VNI SYRCK  DVI +K +      +++  +  ++ 
Sbjct: 80  GMAPTIPAARQLVNHRYILVNNCIVNIPSYRCKPHDVITIKDRQSSQKMIVKNVEFFQKY 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P ++S N         +I   L      + +   LVVE+YSR
Sbjct: 140 KIPNHLSFNALEKKGLVKQI---LDQEFVGLKINELLVVEYYSR 180


>gi|22854717|gb|AAN09778.1| small ribosomal protein 4 [Didymodon paramicola]
          Length = 191

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 30  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRVARKAKGSTGQILLQLLEMRLDNVIFRL 88

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R V I SYRCK  D I +  + K    V +    +++ 
Sbjct: 89  GMAPTIPGARQLVNHRHILVNNRIVGIPSYRCKPQDFITINNRKKSQVMVAKNVDFSQKS 148

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 149 KIPNHLTFNSLEKKGLINQI---LDQESIGLKINELLVVEYYSR 189


>gi|124021096|gb|ABM88821.1| small ribosomal protein subunit 4 [Aneura maxima]
          Length = 187

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 9/194 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR G       K+P +               K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRPGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLK 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
               A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I S
Sbjct: 57  YVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           Y CK GDVI +  + K     + + Q  +  +P +++ +    V +  +I          
Sbjct: 117 YNCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WIY 171

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 172 LKINELLVVEYYSR 185


>gi|42794730|gb|AAS45760.1| Rps4 [Thibaudia tomentosa]
          Length = 211

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K     F  Q   KQK++ 
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKPKTGNSRRTQSRFVKKKKXNIXFVYQ--EKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E+      +   +  G T   L+  LE R D I++R     TI  A Q V  RH
Sbjct: 59  HYG-LTERPLLKYVRFPGKXXGSTGQVLLQLLEMRXDNILFRWGRAXTIPGAXQLVTXRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR  +I SYRC   D+   ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRLKDIPSYRCNPRDIXTAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|46811048|gb|AAT01842.1| small ribosomal protein 4 [Riccia huebeneriana subsp. sullivantii]
          Length = 179

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++
Sbjct: 16  NKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIF 74

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+L+N  +V+I SY CK  D+I +K + K  + + +     +
Sbjct: 75  RLGMAPTIPGARQLVNHQHILINNHTVDIPSYNCKPKDIITIKDRQKSKSIITKNLNFFQ 134

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++ +   +     +I          + +   LVVE+YSR
Sbjct: 135 KQKIPNHLNFDLIQIKGLINQIVDR---EWIYLKINELLVVEYYSR 177


>gi|14090422|gb|AAK53496.1| small ribosomal protein 4 [Mitthyridium constrictum]
          Length = 182

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++
Sbjct: 72  LDNIIFRLGLAPTIPGARQLVNHRHILVNNNIVNIPSYQCKSQDFITIKDQQKYQTMIVK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ + +   P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 132 NTKFSPKHKTPNHLTFNSVEKKGLVNQI---LNQESIGLKINELLVVEYYSR 180


>gi|3914821|sp|O19986|RR4_ALOVE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292737|emb|CAA92529.1| ribosomal protein S4 [Alophia veracruzana]
          Length = 182

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 9/190 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SYRCK  D+I  K K +    +          ++P ++ ++         +I  S 
Sbjct: 116 VDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHAELPNHLIIDPLQYKGLVNQIIDSK 175

Query: 187 KDVPYPVIMQ 196
                 + + 
Sbjct: 176 ---WIGLKIN 182


>gi|3098252|gb|AAC15574.1| small ribosomal protein 4 [Hildebrandtiella pachyclada]
          Length = 175

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 6   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 64

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SY+CK  D I +K + K    + +
Sbjct: 65  LDNVIFRLGMAPTIPGARQLVNHRHILVNSCIVDIPSYQCKPQDFITIKNQRKSETIISK 124

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 125 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 173


>gi|108861094|gb|ABG21419.1| ribosomal protein small subunit 4 [Marsilea minuta]
          Length = 196

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+P    S       Q    K S + ++L AKQ+++  YG ++E++  
Sbjct: 1   IRRLKSLPGLTGKAPNPRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ 
Sbjct: 58  RYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSL 186
           SYRC+  D I V+ +      +      + R  ++P+++S   +  +       ++    
Sbjct: 118 SYRCEPQDNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---A 174

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           K     + +   L+VE+YSR
Sbjct: 175 KRESMDLNINELLIVEYYSR 194


>gi|7576649|gb|AAF63937.1| ribosomal protein system 4 [Phyllodrepanium falcifolium]
          Length = 186

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+     S    ++      K S + ++L  KQK++ +YG I+E++  +  +
Sbjct: 1   GVLPGLTNKTSQLNSSS---VNTSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVR 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN  +V+I SYRC
Sbjct: 57  IARKAKGSTGEILLQLLEMRLDNIIFRLGMSLTIPEARQLVNHRHILVNDCTVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K    + +     ++  +P +++ N         +I          + 
Sbjct: 117 KPQDFITIKDRQKSQTMISKNIDFYQKYKIPNHLTYNSLKKKGLVNQILDRK---SIDLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|305672241|gb|ADM63544.1| ribosomal protein S4 [Nephrophyllidium crista-galli]
 gi|305672273|gb|ADM63560.1| ribosomal protein S4 [Menyanthes trifoliata]
          Length = 173

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A V  +   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTITARDEQKSRALVQNSIDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172


>gi|289599925|gb|ADD12913.1| ribosomal protein S4 [Hibbertia hermanniifolia]
          Length = 163

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K  A +      +   
Sbjct: 61  SMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDIITVKDEHKSRALIQNYLDSSPHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHPFQYKGLINQIIDSK---WIGLKINELLVVEYYSR 161


>gi|66990666|emb|CAI29111.1| small ribosomal protein 4 [Plagiochila incerta]
          Length = 176

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 5/180 (2%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG +
Sbjct: 1   GPRVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-L 56

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N 
Sbjct: 57  TERQLLKYMRIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINN 116

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPS 184
             V+I SY C+ GD+I +  K K  + V++     ++  +P +++ +   +  +  ++ +
Sbjct: 117 DIVDIPSYNCEPGDIITIGNKQKSRSIVIKNINSFQKLKIPSHLTFDSTQLRGSCNQMIN 176


>gi|305672361|gb|ADM63604.1| ribosomal protein S4 [Pentaphragma sp. Duangjai 49]
          Length = 173

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----KAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRLAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  +   K  A + ++   + + ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTIMARDGQKSRALIQKSLDSSPDEELPNHLTLHPFQYKGLVNQIIDS 172


>gi|299008266|gb|ADJ00094.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008268|gb|ADJ00095.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008270|gb|ADJ00096.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008272|gb|ADJ00097.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008274|gb|ADJ00098.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008276|gb|ADJ00099.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008278|gb|ADJ00100.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008280|gb|ADJ00101.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008282|gb|ADJ00102.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008284|gb|ADJ00103.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008286|gb|ADJ00104.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008288|gb|ADJ00105.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008290|gb|ADJ00106.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008292|gb|ADJ00107.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008294|gb|ADJ00108.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008304|gb|ADJ00113.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008306|gb|ADJ00114.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008308|gb|ADJ00115.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008310|gb|ADJ00116.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008312|gb|ADJ00117.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008314|gb|ADJ00118.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008316|gb|ADJ00119.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008318|gb|ADJ00120.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008320|gb|ADJ00121.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008322|gb|ADJ00122.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008324|gb|ADJ00123.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008326|gb|ADJ00124.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008328|gb|ADJ00125.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008330|gb|ADJ00126.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008332|gb|ADJ00127.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008334|gb|ADJ00128.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008336|gb|ADJ00129.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008338|gb|ADJ00130.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008340|gb|ADJ00131.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008342|gb|ADJ00132.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008344|gb|ADJ00133.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008346|gb|ADJ00134.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008348|gb|ADJ00135.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008350|gb|ADJ00136.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008352|gb|ADJ00137.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008354|gb|ADJ00138.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008356|gb|ADJ00139.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008358|gb|ADJ00140.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008360|gb|ADJ00141.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008362|gb|ADJ00142.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008364|gb|ADJ00143.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008366|gb|ADJ00144.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008368|gb|ADJ00145.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008370|gb|ADJ00146.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008372|gb|ADJ00147.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008374|gb|ADJ00148.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008376|gb|ADJ00149.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008378|gb|ADJ00150.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008380|gb|ADJ00151.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008382|gb|ADJ00152.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008384|gb|ADJ00153.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008386|gb|ADJ00154.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008388|gb|ADJ00155.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008390|gb|ADJ00156.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008392|gb|ADJ00157.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008394|gb|ADJ00158.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008396|gb|ADJ00159.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008398|gb|ADJ00160.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008400|gb|ADJ00161.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008402|gb|ADJ00162.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008404|gb|ADJ00163.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008406|gb|ADJ00164.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008408|gb|ADJ00165.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008410|gb|ADJ00166.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008412|gb|ADJ00167.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008414|gb|ADJ00168.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008416|gb|ADJ00169.1| small ribosomal protein 4 [Radula lindenbergiana]
 gi|299008418|gb|ADJ00170.1| small ribosomal protein 4 [Radula lindenbergiana]
          Length = 184

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     +  +S         +K   S + ++L  KQK++ +YG ++EK+     + A  
Sbjct: 1   PGLSNKTLKPKSISIDRSMSNKK--ISQYRIRLEEKQKLRFHYG-LTEKQLLKYVRIARN 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
            +G T   LI  LE RLD I++     PTI  ARQ VNH+H ++N  +VNI SY C+ GD
Sbjct: 58  IKGSTGQVLIQLLEMRLDNIIFCLGLAPTIPGARQLVNHKHFVINNFTVNIPSYNCELGD 117

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I V+ + K  + +     L ++ ++P +++ +   +  +  +    +        +   
Sbjct: 118 IITVRNRHKSKSIITRNMNLFQKLEIPNHLTFDSTQLRGSINQ---RIDYNSINFKINEL 174

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 175 LVVEYYSR 182


>gi|184127949|gb|ACC67874.1| ribosomal protein small subunit 4 [Marattia douglasii]
          Length = 186

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD 
Sbjct: 17  QSASKKISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 76  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 135

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 136 SLNKDKIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 184


>gi|305672373|gb|ADM63610.1| ribosomal protein S4 [Echinops bannaticus]
          Length = 173

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172


>gi|305672291|gb|ADM63569.1| ribosomal protein S4 [Scaevola auriculata]
          Length = 170

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 10/179 (5%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KS  + R   P         K S +  +L+ KQK++ +YG ++E++
Sbjct: 1   KKIRRLGTLPGLSTKSVYDLRKNPP--------WKKSLYCTRLQEKQKLRFHYG-LTERQ 51

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G+T   L+  LE RLD I++R    PT+  ARQ VNH+H+LVNGR VN
Sbjct: 52  LLKYVRIAGKAKGETGQVLLQLLEMRLDNILFRLGMAPTLPGARQLVNHKHILVNGRIVN 111

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLK 187
           I SYRCK  D IE +   K  A + +        +VP+++++          RI     
Sbjct: 112 IPSYRCKPRDTIEARDDQKSRALIQKNLAAYLGEEVPDHLTIQPLQYKGLVKRIIDRES 170


>gi|289599854|gb|ADD12878.1| ribosomal protein S4 [Acrotrema costatum]
          Length = 163

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 2   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D++ VK + K  A +      +   
Sbjct: 61  GMASTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSSPHE 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 121 ELPKHLTLHTFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 161


>gi|53830736|gb|AAU95217.1| small ribosomal protein 4 [Syrrhopodon banksii]
 gi|53830738|gb|AAU95218.1| small ribosomal protein 4 [Syrrhopodon banksii]
 gi|53830740|gb|AAU95219.1| small ribosomal protein 4 [Syrrhopodon banksii]
 gi|53830742|gb|AAU95220.1| small ribosomal protein 4 [Syrrhopodon banksii]
          Length = 177

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD 
Sbjct: 11  STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++ + 
Sbjct: 70  IIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFINIKDQQKYQTMIVKNTN 129

Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +++  P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 130 FFSKQKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175


>gi|305672181|gb|ADM63514.1| ribosomal protein S4 [Cichorium intybus]
 gi|305672299|gb|ADM63573.1| ribosomal protein S4 [Tragopogon dubius]
          Length = 173

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDTIAARDEQKSKALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172


>gi|284468553|gb|ADB90337.1| ribosomal protein subunit 4 [Kindbergia praelonga]
          Length = 180

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 178


>gi|305672231|gb|ADM63539.1| ribosomal protein S4 [Billardiera heterophylla]
          Length = 173

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTTKRP----RTGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|157689446|gb|ABV65279.1| ribosomal protein S4 [Clidemia dentata]
          Length = 175

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 31  SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLIS 90
             G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+ 
Sbjct: 1   RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQ 59

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150
            LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  +   K  
Sbjct: 60  LLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDIITARDDQKSR 119

Query: 151 ASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           A +      + R ++P++++++         +I  S       + +   L V+ YSR
Sbjct: 120 AVIQNYLDSSPREELPKHLTLHPFQYKGVVHQIIDSK---WVGLKINELLDVQHYSR 173


>gi|32401793|gb|AAP80885.1| small ribosomal protein 4 [Amborella trichopoda]
          Length = 178

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 5/180 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q R    S + ++L  KQK++ +YG ++E++     + A +++G T   
Sbjct: 1   KKPRSASDLRNQSRSGIRSLYRIRLEEKQKLRFHYG-LTERQLLRYVRIAGKAKGSTGQV 59

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK GD +  ++K 
Sbjct: 60  LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRLVDIPSYRCKPGDFVTTREKR 119

Query: 148 KQLASVLEA-SQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           K  A      +     + P++++++         +I  S       + +   L+VE+YSR
Sbjct: 120 KNTALGPNIWNHPPXGEWPKHLTLHSLQYKGVVNQIIDSK---WVGLKVNELLIVEYYSR 176


>gi|305672245|gb|ADM63546.1| ribosomal protein S4 [Valerianella locusta]
          Length = 173

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KSP+   S    L  Q    K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKSPIKRSS----LRNQSSSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  +++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHKELPKHLTLQSFQYKGLVNQIIDS 172


>gi|63101013|gb|AAY33131.1| small ribosomal protein 4 [Rhytidiopsis robusta]
          Length = 170

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 1   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 59

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
            D +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 60  SDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 119

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 120 NIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVVEYYSR 168


>gi|305672265|gb|ADM63556.1| ribosomal protein S4 [Patrinia triloba]
          Length = 173

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +      +  +++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNYLDSSPHKELPKHLTLQSFQYKGLVNQIIDS 172


>gi|77019191|emb|CAH60201.1| chloroplast 30S ribosomal protein S4 [Grimmia orbicularis]
          Length = 173

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 4   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYGRIARKAKGSTGQVLLQLLEMR 62

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +  R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 63  LDNVSLRLGMTPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITIKDRQKSQAMIIK 122

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 123 NMDFSQKYKIPNHLTFNSLENKGLINQI---LDHESIGLKINELLVVEYYSR 171


>gi|305672343|gb|ADM63595.1| ribosomal protein S4 [Roussea simplex]
          Length = 173

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P +   +      Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRPRDESDF----RNQSRSEKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLNYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRLVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A V ++   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPQDTIMARDEQKSRALVQKSLDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172


>gi|32401785|gb|AAP80881.1| small ribosomal protein 4 [Pseudotsuga menziesii]
          Length = 174

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            +    K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D
Sbjct: 7   NRSSSRKISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRSD 65

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
            I++R    PTI  ARQ VNH H+ VN   V+I SY CK  DVI ++ + +    + +  
Sbjct: 66  NIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSYPCKPQDVITIRDQPRLRTIIRKNI 125

Query: 158 QLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L +RD +P +++ N         +I  S       + +   LVVE+YSR
Sbjct: 126 DLLQRDKLPNHLTFNSLQYKGFINQIIDSK---WISLKINELLVVEYYSR 172


>gi|14090434|gb|AAK53502.1| small ribosomal protein 4 [Syrrhopodon banksii]
          Length = 182

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD 
Sbjct: 16  STSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++ + 
Sbjct: 75  IIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFINIKDQQKYQTMIVKNTN 134

Query: 159 -LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +++  P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 135 FFSKQKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|20531069|gb|AAM27356.1| ribosomal protein 4 [Notoligotrichum trichodon]
          Length = 186

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTGXTLQLKSGYINQAVSNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R    PTI  ARQ V H+H+LVN R VNI SYRCK  
Sbjct: 59  RAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVTHKHILVNDRIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + +  A + +    +++     +   N         +I   L      + +  
Sbjct: 119 DFITIKDRQESQAIIAKNIDFSQKFKXPNLWPFNFLEKKGLVNQI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|305672263|gb|ADM63555.1| ribosomal protein S4 [Triplostegia glandulifera]
          Length = 174

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G+      K P        GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGDLPGLTNKKP----RAVSGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGHIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  + +P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPPEKLPKHLTLQSFQYKGLVNQIIDS 172


>gi|321309627|ref|YP_004191956.1| 30S ribosomal protein S4 [Mycoplasma haemofelis str. Langford 1]
 gi|319801471|emb|CBY92117.1| ribosomal protein S4 [Mycoplasma haemofelis str. Langford 1]
          Length = 204

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQK 57
           MS+   S  K  R++G +L    +  +    R+  PG HG    + K S +G QLR KQK
Sbjct: 1   MSRFTGSIFKKSRKLGISLLENNREFTKWKKRTTPPGQHGNSGVRRKVSLYGEQLREKQK 60

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +   YG + + + R  FK A +  G  S+NL+  LE RLD +VYR  F PT  AARQ V+
Sbjct: 61  LALMYG-LHDAQLRRFFKAARKIEGSLSYNLLLLLERRLDNVVYRMNFAPTRRAARQLVS 119

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H HVLVNG+ V+I S      D I +  K   L  V   + L E D P+Y+ V+ +N   
Sbjct: 120 HGHVLVNGKQVDIPSLWVNINDEIAIVPKYHHLPLV---NMLKEYDTPDYVDVDPENKRG 176

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++R P   +       +    VVE++ R
Sbjct: 177 IYLRYPHRRE---LNQQINEVYVVEWFKR 202


>gi|289599874|gb|ADD12888.1| ribosomal protein S4 [Dillenia indica]
          Length = 165

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R  K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I+
Sbjct: 1   RSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNIL 59

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +R     TI  ARQ VNHRH+LVN R V+I SYRCK  D++ VK + K  A +      +
Sbjct: 60  FRLGMTSTIPGARQLVNHRHILVNDRIVDIPSYRCKPRDILTVKDEHKSRALIQNYLDSS 119

Query: 161 ER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++P++++++         +I  S       + +   LVVE+YSR
Sbjct: 120 PHEELPKHLTLHPFQYKGLVNQIIDSK---CVGLKINELLVVEYYSR 163


>gi|37548839|gb|AAO32688.1| ribosomal protein 4 [Dawsonia polytrichoides]
          Length = 154

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 5/156 (3%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L  KQK++ +YG I+E++  +  + A R++G T   L+  LE RLD I++R    PTI  
Sbjct: 1   LEEKQKLRFHYG-ITERQLLNYVRIARRAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPG 59

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISV 170
           ARQ VNH+H+LVN   VNI SYRCK  D I +K + K    + +    +++  +P ++  
Sbjct: 60  ARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIAKNIDFSQKYKIPNHLIF 119

Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           N         +I   L      + +   LVVE+YSR
Sbjct: 120 NSLERKGLVNQI---LDRESIGLKINELLVVEYYSR 152


>gi|184127989|gb|ACC67894.1| ribosomal protein small subunit 4 [Marattia oreades]
          Length = 187

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 102/190 (53%), Gaps = 9/190 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G     + ++     +     K K S + ++L AKQ+++  YG ++E++     + A ++
Sbjct: 1   GLTNKTLKSKKAQIAIDQPASK-KISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKA 58

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+
Sbjct: 59  KGSTGQVLLQLLEMRLDNILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDI 118

Query: 141 IEVKQKSKQLASVLEASQLAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQ 196
           I V+ ++     V +  +   +D +PE+++++    +       RI +        + + 
Sbjct: 119 ISVRDQTNSQILVKKNLEFLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNIN 175

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 176 ELLVVEYYSR 185


>gi|42794687|gb|AAS45740.1| Rps4 [Satyria panurensis]
          Length = 211

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P                            K    +
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNXRRTQSRXXXXXXXXXXXXXXXXXKL---R 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           ++  ++E++     +   + +G     L+  L  RLD  ++R     TI  ARQ VNHRH
Sbjct: 58  FHXGLTERQLLKYVRIPGKPKGSPGQVLLXLLXMRLDKXLFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I SYRCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|14090456|gb|AAK53513.1| small ribosomal protein 4 [Leucophanes albescens]
          Length = 182

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD I++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SY CK  D I +K + K    +++ +    
Sbjct: 78  RLGLAPTIPGARQLVNHRHILVNNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFP 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 138 KYKTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|29422413|gb|AAO84602.1| small ribosomal protein 4 [Catoscopium nigritum]
          Length = 171

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 5/175 (2%)

Query: 5   ESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD 64
              + +I RR+G       K+P    S    ++      K S + ++L  KQK++ +YG 
Sbjct: 1   RGPRVRIIRRLGALPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG- 56

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 57  ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 116

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVAT 178
              VNI SYRCK  D I +K + K  A + +    +++  VP +++ N       
Sbjct: 117 DYIVNIPSYRCKPQDFISIKDQQKSQAIIXKNIDFSQKAKVPNHLTFNFLQKNGL 171


>gi|254995531|emb|CAO82723.1| ribosomal protein S4 [Diphasiastrum complanatum]
          Length = 152

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 5/154 (3%)

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R    PTI  AR
Sbjct: 1   EKQKLRFHYG-LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGAR 59

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Q VNH+H+LVN R++N+ SYRCK  D+I  + +S+  A + + ++ ++   +P +++++ 
Sbjct: 60  QLVNHKHILVNNRAINVPSYRCKPKDIITARDRSESQAIIAKNNEFSQTYKIPNHLTLHS 119

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                   +I            +   LVVE+YSR
Sbjct: 120 LQNKGLVNKIIDR---ESIDSNINELLVVEYYSR 150


>gi|62288926|sp|P69632|RR4_ARICA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|62288927|sp|P69633|RR4_ARIPL RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2292726|emb|CAA92531.1| ribosomal protein S4 [Aristea capitata]
 gi|2292728|emb|CAA92530.1| ribosomal protein S4 [Aristea platycaulis]
          Length = 183

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIRRLGALPGFTSKRP----RSGSDLKNQLRSGKKSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNDRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +    ++P +++++         +I  +
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNYIASSPHHEELPNHLTIDPFQYKGLVNQIIDN 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|78102623|gb|ABB21525.1| small ribosomal protein 4 [Chiloscyphus profundus]
          Length = 176

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 5/180 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+     SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKQKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V I SY C+ GD+I ++ K K  + + +   L ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VGIPSYNCEPGDIITIRNKQKSQSIITKNINLFQKLKIPSHLTFDSIKLRGSVNQMINRE 176


>gi|305672351|gb|ADM63599.1| ribosomal protein S4 [Helwingia sp. Peng et al. 17408]
          Length = 173

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKVRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K +A +  +   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQKSIAMIQNSLDSSPHEELPNHLTLHPFQYKGLINQIIDS 172


>gi|184128083|gb|ACC67941.1| ribosomal protein small subunit 4 [Ophioglossum reticulatum]
          Length = 170

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 1   QPVSKKISQYCIRLEAKQRLRLNYG-LTERQLLKYVRIARRARGSTGQVSLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN R V++ SY C   D+I V+ +      + +  +
Sbjct: 60  IIFRLGMSPTIPGARQLVNHRHILVNDRVVDVPSYCCGPNDIITVRDRKNSQDLIRKNME 119

Query: 159 LA-ERDVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + E ++P ++S++    D +     RI          + +   L+VE+YSR
Sbjct: 120 SSYESEIPNHLSLSLSKSDKLKGFVNRIIDR---ESIGLEVNELLIVEYYSR 168


>gi|33413209|emb|CAD86771.1| ribosomal protein small subunit 4 [Distichium capillaceum]
          Length = 175

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
            D +++R    PTI  ARQ VNHRH+LVN R VNI SYRCK  D I +K + K  A +++
Sbjct: 70  SDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPQDFITIKDRQKSQAIIIK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
             + +++  VP +++ N         +I   L      + +   LVVE+
Sbjct: 130 NIEFSQKYKVPNHLTFNSLQKKGLVNQI---LDRESIGLKINELLVVEY 175


>gi|14090440|gb|AAK53505.1| small ribosomal protein 4 [Syrrhopodon confertus]
          Length = 182

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD I++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARKVKGSTGQVLLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SY CK  D I +K + K    +++ +    
Sbjct: 78  RLGLAPTIPGARQLVNHRHILVNNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFS 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 138 KYKTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|305672239|gb|ADM63543.1| ribosomal protein S4 [Pennantia cunninghamii]
          Length = 173

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  K +    A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITAKDEQNSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|184128001|gb|ACC67900.1| ribosomal protein small subunit 4 [Angiopteris evecta]
          Length = 164

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 8/166 (4%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD I++R  
Sbjct: 1   ISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD- 163
             PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +   +D 
Sbjct: 60  MSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQ 119

Query: 164 VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +PE+++ +    +       RI +        + +   LVVE+YSR
Sbjct: 120 IPEHLTFSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 162


>gi|184127925|gb|ACC67862.1| ribosomal protein small subunit 4 [Danaea nodosa]
          Length = 180

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 11  PSASKKISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    P+I AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++   + V    +
Sbjct: 70  ILFRLGMSPSIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIINVRNQTNSHSLVKRNLE 129

Query: 159 LAERD-VPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++D +PE+++   +  D       +I +        + +   LVVE+YSR
Sbjct: 130 SLDKDKIPEHLTLSLLEDDKPQGLVNKIVTRD---SIGLNINELLVVEYYSR 178


>gi|305672329|gb|ADM63588.1| ribosomal protein S4 [Morina longifolia]
          Length = 173

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P   R    GL  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRPREKR----GLRNQSRSGKKSQYCIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A + +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR ++
Sbjct: 56  LLKYVRIAGKVKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIID 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +         +++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDIIMARDEQNSRALIQNYLDSFPPKELPTHLTLQSVEYKGLVNQIIDS 172


>gi|305672369|gb|ADM63608.1| ribosomal protein S4 [Stylidium graminifolium]
          Length = 173

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKKP----RAGNDLRNQSRWGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A + +G T   L+  LE RLD I++R    PT+  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKVKGSTGRVLLQLLEMRLDNILFRLGMAPTVPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +       ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTISARDEQKSRALIQNSLNSPPHEELPNHLTLDPFQYKGLVNQIIDS 172


>gi|15021384|gb|AAK77665.1| small ribosomal protein 4 [Sphagnum tenerum]
          Length = 188

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P +   Y   +       K S +   L  KQK++ +YG I+E++     +
Sbjct: 2   GILPGLTSKTPQSKSXY---IXQPISNKKVSQYRXXLEEKQKLRFHYG-ITERQLLKYVR 57

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A R++G T   L+  LE RL  +++R    PTI  ARQ VNHRH+LVN  +VNI SYRC
Sbjct: 58  IARRAKGSTGQVLLQLLEMRLXNVIFRLGMAPTIPGARQLVNHRHILVNDHTVNIPSYRC 117

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D I +K + K  A +  +   +     P +++++      +  +I          + 
Sbjct: 118 KPQDFITIKDRQKSQAIITXSMDYSRGYKTPNHLTLDSSQKKGSVNQIIXR---ESIGLK 174

Query: 195 MQPNLVVE 202
           +   L+VE
Sbjct: 175 INELLIVE 182


>gi|51860459|gb|AAU11366.1| ribosomal protein small subunit 4 [Gnetum ula]
          Length = 196

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 10/201 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            KI RR+        K P   +         R   K S     L+ KQK++ ++G ++E+
Sbjct: 1   FKIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTER 56

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R   +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN   V
Sbjct: 57  QLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVV 116

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSS 185
           NI SY+CK  DVI +K K       +     ++  E  +P +++++         +I   
Sbjct: 117 NIPSYQCKPQDVITIKGKKIDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKIIDR 176

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + ++  LV+E+YSR
Sbjct: 177 KD---IQLNIKEMLVIEYYSR 194


>gi|83416502|gb|ABC18271.1| small ribosomal subunit protein 4 [Garovaglia elegans]
          Length = 186

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKIPQLKSGSINQ--STSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  
Sbjct: 59  KTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I VK +      + +     ++  +P +++           +I   L      + +  
Sbjct: 119 DFIIVKNEKNSEGVINKDGDFHQKYKIPNHLTYIFLEKKGLVNKI---LDRESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|305672309|gb|ADM63578.1| ribosomal protein S4 [Escallonia coquimbensis]
          Length = 173

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K    +  +   +   ++P +++++         +I  +
Sbjct: 116 IPSYRCKPRDTITARDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDN 172


>gi|225024812|ref|ZP_03714004.1| hypothetical protein EIKCOROL_01699 [Eikenella corrodens ATCC
           23834]
 gi|224942415|gb|EEG23624.1| hypothetical protein EIKCOROL_01699 [Eikenella corrodens ATCC
           23834]
          Length = 140

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 4/143 (2%)

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           + E++FR  F EA R +G T   L+  LESRLD +VYR  F  T   ARQ V+H+ +LVN
Sbjct: 1   MLERQFRRYFAEASRRKGATGELLLQLLESRLDNVVYRMGFGSTRAEARQLVSHKAILVN 60

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
           G  VNI S++ K GD + V++K+K+   + E+ QLA +  +P ++SV+ D     F  +P
Sbjct: 61  GEVVNIPSFQVKAGDTVSVREKAKKQVRIQESLQLATQIGLPSWVSVDVDKQEGVFRNMP 120

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                V     +   LVVEFYS+
Sbjct: 121 DR---VDLYSDINEQLVVEFYSK 140


>gi|305672235|gb|ADM63541.1| ribosomal protein S4 [Villarsia sp. Fay s.n.]
          Length = 173

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L    R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNPSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTITARDEQKSRALIQNSIDSSLPEELPNHLTLHPFQYKGLVNQIIDS 172


>gi|51458203|gb|AAU03448.1| ribosomal protein small subunit 4 [Asplenium friesiorum]
          Length = 189

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 22  QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 81  VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 141 VGDKT-PDHLTVSLAEGDKPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|51860539|gb|AAU11406.1| ribosomal protein small subunit 4 [Ephedra rupestris]
          Length = 199

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 14/205 (6%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDIS 66
           + KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG ++
Sbjct: 1   RFKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN  
Sbjct: 56  ERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHH 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVR 181
            V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         +
Sbjct: 116 IVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNK 175

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I  +       + ++  LV+E+YSR
Sbjct: 176 IIDTKD---LQLKIKEMLVIEYYSR 197


>gi|188012811|gb|ACD45544.1| ribosomal protein S4 [Oxymitra incrassata]
          Length = 195

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR G       K+  +   Y   ++      K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRXGSLPGLTNKTLKSKSGY---INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G     L+  LE RLD I++R    PTI  A Q VNHRH+L+N  +
Sbjct: 57  RQLLKYVRIARKAKGSXGQVLLQLLEMRLDNIIFRLGMAPTIPGAXQLVNHRHILINNNT 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           +NI SY CK  DVI +K++ K  + + +     ++  +P +++ +   +     +I    
Sbjct: 117 INIPSYNCKPKDVITIKERPKSQSIIAKNLNSFQKQKIPNHLTFDLMQVKGLVSQIIDR- 175

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 176 --EWVYLKINELLVVEYYSR 193


>gi|305672217|gb|ADM63532.1| ribosomal protein S4 [Azorella caespitosa]
 gi|305672275|gb|ADM63561.1| ribosomal protein S4 [Cryptothladia chinensis]
          Length = 173

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   + R ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSFRDELPKHLTLQPFQYKGLVNQIIDS 172


>gi|184128043|gb|ACC67921.1| ribosomal protein small subunit 4 [Angiopteris lygodiifolia]
          Length = 169

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 96/167 (57%), Gaps = 8/167 (4%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L AKQ+++  +G ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 5   KISQYCIRLEAKQRLRFNHG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRL 63

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
              PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +   +D
Sbjct: 64  GMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKD 123

Query: 164 -VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 124 QIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLDINELLVVEYYSR 167


>gi|305672207|gb|ADM63527.1| ribosomal protein S4 [Wittsteinia panderi]
          Length = 173

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGVLPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPLDTITARDEQKSRALIQNSLDSSPHEELPKHLTLHSFQYKGLVNKIIDS 172


>gi|99640065|emb|CAJ45150.1| putative ribosomal protein S4 gene [Thyrsopteris elegans]
          Length = 199

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + KI RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKIIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V+I SYRCK  D+I V+ +      +      + R  ++P++++      +       
Sbjct: 115 RIVDIPSYRCKPKDIITVRNRPTSYNGLRGGINESSRGDEIPDHLTFSVLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|7576633|gb|AAF63929.1| ribosomal protein system 4 [Lepidopilum scabrisetum]
          Length = 167

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++
Sbjct: 5   NKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIF 63

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH++VN   V+I SYRCK  D I +K + K  A + +  +  +
Sbjct: 64  RLGMAPTIPGARQLVNHRHIVVNDSIVDIPSYRCKPQDFITIKNQQKSKAIISKNIEFYQ 123

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P Y++ N         +I   L      + +   LVVE+YSR
Sbjct: 124 KIKIPNYLTYNFVEKKGLINQI---LDRESIGLKINELLVVEYYSR 166


>gi|305672283|gb|ADM63565.1| ribosomal protein S4 [Viburnum opulus]
          Length = 173

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +      +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRVLIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|305672305|gb|ADM63576.1| ribosomal protein S4 [Phelline comosa]
          Length = 173

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 6/178 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           I SYRCK  D I  + + K  A +  +   +   ++P Y++++         +I  S 
Sbjct: 116 IPSYRCKPRDTITTRDEQKSRALIQNSLDSSPHEELPNYLTLHPFQYKGLVNQIIDSE 173


>gi|305672229|gb|ADM63538.1| ribosomal protein S4 [Moschopsis rosulata]
          Length = 173

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQLRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172


>gi|305672221|gb|ADM63534.1| ribosomal protein S4 [Polyosma sp. McPherson 18643]
 gi|305672261|gb|ADM63554.1| ribosomal protein S4 [Sphenostemon lobosporus]
 gi|305672267|gb|ADM63557.1| ribosomal protein S4 [Quintinia quatrefagesii]
          Length = 173

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|117306734|emb|CAH73335.1| ribosomal protein S4 [Ptychomnion cygnisetum]
          Length = 183

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKIPQLKSSS---INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 57  TKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDSIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K +      + +     ++  +P +++ +         +I   L      + +   
Sbjct: 117 FIIIKDEKNSEGIINKNEDFYQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|51458195|gb|AAU03444.1| ribosomal protein small subunit 4 [Asplenium praemorsum]
          Length = 189

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 22  QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 81  VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 141 VGDKT-PDHLTVSLAEGDKPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|305672295|gb|ADM63571.1| ribosomal protein S4 [Torricellia tiliifolia]
          Length = 173

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R +K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSAKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGGIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  D +P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|99639939|emb|CAJ45114.1| putative ribosomal protein S4 gene [Calochlaena dubia]
          Length = 195

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 11/199 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K+     +         RK   S F ++L AKQ+++  YG ++E++   
Sbjct: 1   RRLKNLPGLTGKASNPRETRVTTDQSASRK--ISQFCVRLEAKQRLRFNYG-LTERQLLR 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH++VN R V++ S
Sbjct: 58  YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRIVDVPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIPSSLK 187
           YRCK  D+I ++ +      +      + R  D+P++++      +       RI     
Sbjct: 118 YRCKPKDIITIRNRPTSYNGLKSGINESSRGGDIPDHLTFSLLEGNRPKGLVNRI---AN 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIDLNINELLVVEYYSR 193


>gi|6002063|emb|CAA58938.1| ribosomal protein S4 [Luzula sylvatica]
          Length = 200

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 11/207 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI  R+   L G        +         R K  P  +   L  KQK++ 
Sbjct: 1   MSRYRGPRVKITNRLRAFLPGLIDKKYKIKER---KKYFRYKKIPKQYNNCLIEKQKLRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +S+G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 58  HYG-LTERQLVRYIRIAGKSKGSTGQVLLQLLEMRLDNILFRLSMAWTIREARQLVNHRH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL----AERDVPEYISVNHDNMV 176
           +LVNGR V+I SYRCK GD+I  K   K    +     L     +R +P+++S+N     
Sbjct: 117 ILVNGRIVDIPSYRCKPGDIIATKDNQKSKDLIRRCIGLTRQRKKRLLPKHLSINSREYK 176

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEF 203
           A   +I    +     + +   LVVE+
Sbjct: 177 AKVKKIIDRTE---VYLKIDELLVVEY 200


>gi|320455036|dbj|BAJ65665.1| small ribosomal protein 4 [Metzgeria temperata]
 gi|320455040|dbj|BAJ65667.1| small ribosomal protein 4 [Metzgeria temperata]
          Length = 187

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKSKSSY---IDRPAPNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P +++ +   ++ +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSIQKQGIPNHLAFDSTKIIGSVNRVINR- 175

Query: 187 KDVPYPVIMQPNLV 200
                 + +   LV
Sbjct: 176 --ECIDLKINELLV 187


>gi|293612016|gb|ADE48452.1| ribosomal protein 4 [Stangeria eriopus]
          Length = 162

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A R++G T   L+  LE R D  ++R 
Sbjct: 1   KISQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGRAKGSTGQVLLQLLEMRSDNTIFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
              PTI  ARQ VNHRH+LVN   V+I SYRCK  DVI V+ +    + + +   L+++D
Sbjct: 60  GMAPTIPGARQLVNHRHILVNDCVVDIPSYRCKPLDVITVRNQQGLRSMIDKNLNLSQKD 119

Query: 164 -VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++++         +I  S       + +   LVVE+YSR
Sbjct: 120 QMPNHLTLHSSRYKGLVNQIIDSK---WISLKVNELLVVEYYSR 160


>gi|32879547|emb|CAE11884.1| ribosomal protein S4 [Onira unguiculata]
          Length = 180

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 9/188 (4%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                  A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVHIAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D+I  K K +    +          ++P +++++         +I  S   
Sbjct: 116 IPSYRCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK-- 173

Query: 189 VPYPVIMQ 196
               + + 
Sbjct: 174 -WIGLKIN 180


>gi|14090458|gb|AAK53514.1| small ribosomal protein 4 [Leucophanes glaucum]
          Length = 182

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++  +  + A R +G T   L+  LE RLD I++
Sbjct: 19  NKKISQYRIRLEEKQKLRFHYG-LTERQLLNYIRIARRVKGSTGQVLLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNHRH+LVN R VNI SY CK  D I +K + K    +++ +    
Sbjct: 78  RLGLAPTIPGARQLVNHRHILVNNRIVNIPSYHCKPQDFITIKDQQKYQTMIVKNTSFFP 137

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   P ++  N         ++   L      + +   LVVE+YSR
Sbjct: 138 KYKTPNHLIFNSVEKKGLVNQL---LDQESIGLKINELLVVEYYSR 180


>gi|80974166|gb|ABB53776.1| small ribosomal subunit protein 4 [Hampeella concavifolia]
          Length = 187

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 7/190 (3%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           NL G        +S         +K   S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 2   NLPGLTNKIPQLKSNSINQSTSTKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R    PTI  ARQ VNHR +LVN   VNI SYRCK 
Sbjct: 59  RKAKGSTGEVLLQLLEMRLDNILFRLNMAPTIPGARQLVNHRQILVNNCIVNIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            D I VK        + +    +++D +P ++  +         +I   L      + + 
Sbjct: 119 QDFIIVKNLKSSEVRINKNKDFSQKDKIPNHLIYSSLEKKGLVNKI---LDRESIGLKIN 175

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 176 ELLVVEYYSR 185


>gi|305672297|gb|ADM63572.1| ribosomal protein S4 [Barnadesia arborea]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDTIAARDEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172


>gi|184127987|gb|ACC67893.1| ribosomal protein small subunit 4 [Marattia oreades]
          Length = 174

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 5   QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDN 63

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 64  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 123

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 124 FLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 172


>gi|305672357|gb|ADM63602.1| ribosomal protein S4 [Sambucus caerulea]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P++++++         +I  +
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDN 172


>gi|184127973|gb|ACC67886.1| ribosomal protein small subunit 4 [Marattia smithii]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 4   QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDN 62

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 63  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 122

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 123 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 171


>gi|305672367|gb|ADM63607.1| ribosomal protein S4 [Ilex crenata]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGNDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K +  V  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQKSIVLVQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|16565378|gb|AAL26204.1|AF313603_1 small ribosomal protein 4 [Equisetum bogotense]
          Length = 190

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     V ++        Q  + K S + ++L AKQ+++  YG ++E++  +  + A 
Sbjct: 1   LPGLTNKLVESKKNQASGSDQSIQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
            ++G T   L+  LE RLD I++R   VPTI +ARQ +NHRH+LVN R V++ S+ CK  
Sbjct: 60  CAKGSTGQILLQLLEMRLDNILFRLGVVPTIPSARQLINHRHILVNDRIVDVPSFHCKPK 119

Query: 139 DVIEVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVI 194
           D+I +       + + +  +  A+  +P+++++              + +        + 
Sbjct: 120 DIITIGAPKIYQSIITKRIESFAKDQIPDHLTLSLSEPKKPKGFVNYLINR---ESIGLK 176

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 177 INELLVVEYYSR 188


>gi|305672285|gb|ADM63566.1| ribosomal protein S4 [Crispiloba disperma]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+L+NGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILINGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A V  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDTITARDEQKSRALVQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|14090452|gb|AAK53511.1| small ribosomal protein 4 [Arthrocormus schimperi]
 gi|14090454|gb|AAK53512.1| small ribosomal protein 4 [Arthrocormus schimperi]
          Length = 182

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD I++R 
Sbjct: 21  KVSQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++ +    + 
Sbjct: 80  GLAPTIPGARQLVNHRHILVNNRIVNIPSYQCKPQDFITIKDQQKYQKMIIKNTSFFPKY 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 140 KTPNHLIFNSVEKKGLVNQI---LDQESIGLKINELLVVEYYSR 180


>gi|124021100|gb|ABM88823.1| small ribosomal protein subunit 4 [Aneura maxima]
          Length = 188

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 9/193 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R G       K+P +               K S + ++L  KQK++ +YG ++E++    
Sbjct: 3   RSGTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
              A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I SY
Sbjct: 59  VFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
            CK GDVI +  + K     + + Q  +  +P +++ +    V +  +I          +
Sbjct: 119 NCKPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WIYL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 KINELLVVEYYSR 186


>gi|32879551|emb|CAE11886.1| ribosomal protein S4 [Crocosmia mathewsiana]
          Length = 180

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 10/188 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   KIRRLGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
                 A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I
Sbjct: 56  LKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKD 188
            SYRCK  D+I    K +  A +      +  + ++P +++++         +I  S   
Sbjct: 116 PSYRCKPRDIITTNNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK-- 173

Query: 189 VPYPVIMQ 196
               + + 
Sbjct: 174 -WIGLKIN 180


>gi|52788819|gb|AAU87382.1| ribosomal protein small subunit 4 [Thelypteris palustris]
          Length = 199

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 8/202 (3%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        +              Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKNLPGFTGRGKTPNLVEFRVATDQSASRKISQFCVRLEAKQRLRFNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A ++RG T    +  LE RLD +++R     TI AARQ VNHRH+LVN R 
Sbjct: 60  RQLLKYVRIARKTRGSTGQVPLQLLEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPS 184
           V+I SYRCK  D+I V+ +     + L          P++++V     +       R+  
Sbjct: 120 VDIPSYRCKPKDIITVRNRPTSY-NALRGESPGGDKTPDHLTVSLLEGNRPTGLVNRV-- 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 -ANRESVNLNINELLVVEYYSR 197


>gi|305672223|gb|ADM63535.1| ribosomal protein S4 [Paracryphia alticola]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +      +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRTLIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|305672257|gb|ADM63552.1| ribosomal protein S4 [Heptacodium miconioides]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 6/178 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P   R    GL  Q    K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKKPRTRR----GLRNQSHSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +S+G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKSKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           I SYRCK  D+I  + +    A +  +   + R  +P ++++          +I  S 
Sbjct: 116 IPSYRCKPRDIIMARDEQNSRALIQNSLNSSRRKKLPNHLTLQQFQYKGLVNQIIDSE 173


>gi|66866243|gb|AAY57790.1| small ribosomal protein 4 [Mesochaete undulata]
          Length = 191

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 12/195 (6%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G        +S            K S + ++L  KQK++ +YG I+E++  +  + A
Sbjct: 1   SLPGLTNKTPQLKSSSINQ--STFNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIA 57

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN + V+I SY+CK 
Sbjct: 58  RKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDQIVDIPSYQCKP 117

Query: 138 GDVIEVKQKSKQLASVLEASQLAE------RDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
            D I +K + K  A +                +P ++  +         +I   L     
Sbjct: 118 QDFITIKDRQKSQAIIXXXXXXKNIYFYQKYKIPNHLIYSSLEKKGLVNQI---LDRESI 174

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 175 GLKINELLVVEYYSR 189


>gi|42794685|gb|AAS45739.1| Rps4 [Satyria meiantha]
          Length = 211

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 13/213 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K P    S        ++K   S + ++L+ KQK   
Sbjct: 1   MSRYRGPRFKKIRRLGVLPGLTNKKPKTVNSRXTQSRFVKKK--KSQYHIRLQKKQKXGF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG + ++K     +   + +G     L+  LE RL  I +R     TI  ARQ VNHRH
Sbjct: 59  HYG-LPKRKLLKSVRFPGKXKGSPGQVLLQLLEMRLXNIXFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-----VPEYISVNHD 173
           VLVNGR ++I S RCK  D+I  ++KS+     S      L  R      VP ++++N  
Sbjct: 118 VLVNGRIIDIPSXRCKPRDIITAREKSRALIQNSFQNLFDLPSRKRKRKRVPYHLTLNRG 177

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I ++       + ++  LVVE+YSR
Sbjct: 178 QYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|305672289|gb|ADM63568.1| ribosomal protein S4 [Arctopus dregei]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITSRDEQNSRALIQNSFDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|80974174|gb|ABB53780.1| small ribosomal subunit protein 4 [Ptychomnion densifolium]
          Length = 181

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 12  INQSTSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVLLQLLEMR 70

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +K +      + +
Sbjct: 71  LDNIIFRLGMAPTIPGARQLVNHRHILVNDSIVNIPSYRCKPQDFIIIKDEKNSEGIINK 130

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ +         +I   L      + +   LVVE+YSR
Sbjct: 131 NEDFYQKSKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINELLVVEYYSR 179


>gi|305672335|gb|ADM63591.1| ribosomal protein S4 [Platysace lanceolata]
          Length = 173

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P +    G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRPRD----GSDLRSQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V+
Sbjct: 56  LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGGIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  K +    A +  +   +  D +P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITAKDEQNSRALIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|294337204|emb|CAQ52751.1| ribosomal protein S4 [Meteorium polytrichum]
          Length = 155

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 5/157 (3%)

Query: 51  QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
           +L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R    PTI 
Sbjct: 1   RLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIP 59

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYIS 169
            ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++
Sbjct: 60  GARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISKNIEFYQKYKIPNHLT 119

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +         +I   L      + +   LVVE+YSR
Sbjct: 120 YSSLEKKGLVTQI---LDRESIGLKINELLVVEYYSR 153


>gi|74273123|gb|ABA01261.1| ribosomal protein S4 [Passiflora misera]
          Length = 183

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 5/168 (2%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
            R  + S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 18  SRFGRKSQYCMRLEEKQKLRFHYG-LTERQLLKYVRIAAKAKGPTGQVLLQLLEMRLDNI 76

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    + ++   
Sbjct: 77  LFRLGMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDS 136

Query: 160 AER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R ++P ++ +          +I  S       + +   LV+E+YSR
Sbjct: 137 FPRNNLPTHLILYPKKYKGLVTQIIDSK---CLGLKINEFLVIEYYSR 181


>gi|49574596|ref|NP_848062.2| ribosomal protein S4 [Adiantum capillus-veneris]
 gi|60393878|sp|Q85FL8|RR4_ADICA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|48476001|gb|AAP29394.2| ribosomal protein S4 [Adiantum capillus-veneris]
          Length = 197

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 12  DRRIGEN--LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
            RR+     L G  KS  +          Q    K S F ++L AKQ+++  YG ++E++
Sbjct: 1   MRRLKNLPGLTGTGKSNTSNLGEFRLAVDQSTSRKISQFCVRLEAKQRLRLNYG-LTERQ 59

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A R+RG T   L+  LE RLD I+++     TI AARQ V HRH+LVN R V+
Sbjct: 60  LLRYVRIARRTRGSTGQVLLQLLEMRLDNIIFQLGMASTIPAARQLVCHRHILVNHRVVD 119

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSL 186
           I SYRCK  D+I ++ +    A+ L++  L+  +VP++++++             + +  
Sbjct: 120 IPSYRCKPRDIISIRNRPTS-ANALKSESLSGNEVPDHLTLSISKTGEPTGLVNHLVNR- 177

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 178 --ESVNLDINELLVVEYYSR 195


>gi|18860313|ref|NP_569631.1| ribosomal protein S4 [Psilotum nudum]
 gi|26399157|sp|Q95CA6|RR4_PSINU RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|18389466|dbj|BAB84218.1| ribosomal protein S4 [Psilotum nudum]
          Length = 199

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + L+L AKQ+++  YG ++E++       A ++RG T   L+  LE RLD 
Sbjct: 30  QSTSKKRSQYSLRLEAKQRLRFNYG-VTERQLLKYVCIAKKARGSTGQVLLQLLEMRLDN 88

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN + V+I SYRCK  D+I V+   K    +    +
Sbjct: 89  IIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSYRCKPNDIITVRDHQKSQELIKRNIK 148

Query: 159 LAE-RDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           LA+  ++P +++   +          +I          + +   LVVE+YSR
Sbjct: 149 LAKIDEIPSHLNISYLEETKPKGFINKIVDRG---SIGLEINELLVVEYYSR 197


>gi|305672365|gb|ADM63606.1| ribosomal protein S4 [Cardiopteris moluccana]
          Length = 173

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K        G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNK----RLRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K  A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|305672315|gb|ADM63581.1| ribosomal protein S4 [Anopterus macleayanus]
          Length = 173

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G     Q    K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDPRNQSHSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNTLFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +      +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTITARDEQKSRALIQNFLDSSPHEELPNHLTLHSFQYKGLVNQIIDS 172


>gi|53830756|gb|AAU95227.1| small ribosomal protein 4 [Syrrhopodon revolutus]
 gi|53830758|gb|AAU95228.1| small ribosomal protein 4 [Syrrhopodon revolutus]
 gi|53830760|gb|AAU95229.1| small ribosomal protein 4 [Syrrhopodon revolutus]
 gi|53830762|gb|AAU95230.1| small ribosomal protein 4 [Syrrhopodon revolutus]
 gi|53830764|gb|AAU95231.1| small ribosomal protein 4 [Syrrhopodon revolutus]
 gi|53830766|gb|AAU95232.1| small ribosomal protein 4 [Syrrhopodon revolutus]
 gi|53830768|gb|AAU95233.1| small ribosomal protein 4 [Syrrhopodon revolutus]
          Length = 177

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++  +  + A   +G T   L+  LE R
Sbjct: 8   INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARNVKGSTGQILLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    +++
Sbjct: 67  LDNIIFRLGLAPTIPGARQLVNHRHILVNNHMVNIPSYQCKPQDFITIKDQKKYQTMIVK 126

Query: 156 ASQ-LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +   ++   P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 127 NTNFFSKHKTPNHLIFNSVEKKGFVNQI---LDQESIGLKINELLVVEYYSR 175


>gi|305672189|gb|ADM63518.1| ribosomal protein S4 [Apium graveolens]
          Length = 173

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   + +D +P+++++          +I  S
Sbjct: 116 IPSYRCKPQDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLVNQIIDS 172


>gi|51458085|gb|AAU03395.1| ribosomal protein small subunit 4 [Asplenium ruta-muraria subsp.
           ruta-muraria]
          Length = 189

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ ++    ++   S 
Sbjct: 81  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRTTSCNALKNKSL 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D +     R+          + +   LVVE+YSR
Sbjct: 141 VGDKT-PDHLTVSLSEGDRLTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|115443574|ref|YP_778593.1| 30S ribosomal protein S4 [Bigelowiella natans]
 gi|122233787|sp|Q06J34|RR4_BIGNA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|110810219|gb|ABG91425.1| 30S ribosomal protein S4 [Bigelowiella natans]
          Length = 194

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 17/207 (8%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++   S+ K+ RR+G       KS             Q    + S +G  L+ KQK++ 
Sbjct: 1   MARYRGSRVKVIRRLGLLPGFTSKSSNK---------PQNNNKQLSQYGFHLQEKQKLRY 51

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG ISE +     K A R RG++   L+  LE RLDT++YR  FVPT+ +ARQ ++H H
Sbjct: 52  NYG-ISEHELIKYVKSARRKRGNSGDKLLQLLEMRLDTLLYRTGFVPTVASARQLISHGH 110

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNH--DNMVAT 178
           + VNG+ V+I  + C   D I + ++  +  +    S         ++ +N   +++  T
Sbjct: 111 INVNGKKVDIPGFNCSISDKIVINKEILKSLNDKNNSFSTLN--CSHLVLNELNNDLTIT 168

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYS 205
              +P           +   LV+E+YS
Sbjct: 169 VTNLPDIQ---VLGYSINILLVLEYYS 192


>gi|51860531|gb|AAU11402.1| ribosomal protein small subunit 4 [Ephedra ochreata]
 gi|125662726|gb|ABN50313.1| small ribosomal protein 4 [Ephedra nevadensis]
          Length = 198

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 14/204 (6%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISE 67
            KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG ++E
Sbjct: 1   FKIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   
Sbjct: 56  RQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRI 182
           V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         +I
Sbjct: 116 VDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKI 175

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             +       + ++  LV+E+YSR
Sbjct: 176 IDTKD---LQLKIKEMLVIEYYSR 196


>gi|301167516|emb|CBW27099.1| 30S ribosomal protein S4 [Bacteriovorax marinus SJ]
          Length = 208

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 1   MSKRES--SKHKIDRRIGENLWGRPKS-PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57
           M+K  +  ++ KI R +G  L G  K+  +  R YGPG+HG RRK K S + ++L+ KQK
Sbjct: 1   MAKATTGKARFKIQRALGLELPGLGKAGALERRPYGPGVHGNRRK-KISDYAVRLKEKQK 59

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGD-TSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           +  +YG + EK+  S  K+A +++       L+S LESRL+ +++R  + P++ AA Q V
Sbjct: 60  LVYHYG-LREKQLVSYVKQAKKNQTKPWMETLLSTLESRLNNVIFRLNWAPSMAAASQMV 118

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
            H  V VNG+ V+  S+  K+GDVI +  K         + +      VP   ++  D  
Sbjct: 119 AHGQVQVNGKKVDKSSFIVKKGDVITLSDKGYANQLYKSSVESPRMATVPACYNIEADKK 178

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
             T + +P        P   +  LV+E+Y
Sbjct: 179 KGTMIDLPLPSD---IPFEFEQQLVIEYY 204


>gi|320455034|dbj|BAJ65664.1| small ribosomal protein 4 [Metzgeria furcata]
          Length = 185

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E  + L +  +P +++ +    + +  ++ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERFNSLQKPGIPNHLAFDSTKFIGSVNQMINR- 175

Query: 187 KDVPYPVIMQPN 198
                 + +   
Sbjct: 176 --EWIDLEINEL 185


>gi|305672321|gb|ADM63584.1| ribosomal protein S4 [Gonocaryum litorale]
          Length = 173

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K        G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNK----RLRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I V+ + K  A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITVRDEQKSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|12330550|gb|AAG52812.1| ribosomal protein 4 [Mittenia plumula]
          Length = 186

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +  +S    +       K S + ++L  K K++ +YG I+E++  +  + A 
Sbjct: 2   LPGLTNKILQLKSST--ISXSTSNXKISQYRIRLEEKHKLRXHYG-ITERQLLNYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 59  KAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D I +K + K    + +     ++  +P +++ N         +I          + +  
Sbjct: 119 DFITIKDQQKYQTIISKNIDFYQKYKIPNHLTYNSLXKKGXINQIXDR---ESIGLKINE 175

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 176 LLVVEYYSR 184


>gi|305672277|gb|ADM63562.1| ribosomal protein S4 [Corokia macrocarpa]
          Length = 173

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +      +   ++P ++++          +I  S
Sbjct: 116 IPSYRCKPRDTITSRNEQKSRALIQNYLDSSPHEELPNHLTLQPFQYKGLVNQIIDS 172


>gi|32401767|gb|AAP80872.1| small ribosomal protein 4 [Pinus krempfii]
          Length = 194

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 7/191 (3%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P N +             K S + ++L  KQK++ +YG ++E++     + 
Sbjct: 8   TLPGLTSKRPKNRQDSM--NMNWSSCRKISQYRIRLEEKQKLRSHYG-LTERQLLKYVRV 64

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           + R++G T   L+  LE RLD I++R    PTI  ARQ VNH H+  N   V+I SY CK
Sbjct: 65  SRRAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHGHIRFNDHMVDIPSYPCK 124

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
             DVI ++ + +  A + +   L +RD +P +++ +         +I  S       +  
Sbjct: 125 PQDVITIRDQPRLRAIIKKNIDLFQRDKLPNHLTFHPLQYKGFINQIIDSK---WISLKS 181

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 182 NELLVVEYYSR 192


>gi|14090462|gb|AAK53516.1| small ribosomal protein 4 [Macromitrium incurvifolium]
          Length = 182

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++     + A +++G T   L+  LE R
Sbjct: 13  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLXYIRIARKAKGSTGEVLLQLLEMR 71

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K    + +
Sbjct: 72  LDNVIFRLGMAPTIPGARQLVNHRHILVNDRIVDIPSYRCKPLDFITIKDRRKSQDIINK 131

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P ++  N         +I          + +   LVVE+YSR
Sbjct: 132 NIDFYQKSKIPNHLIYNSLEKKGLVNQIIER---ELIGLKINELLVVEYYSR 180


>gi|82799233|gb|ABB92160.1| 30S ribosomal protein S4 [uncultured marine type-A Synechococcus
           4O4]
          Length = 147

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 5/149 (3%)

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +  YG +SE++     K+A    G T  NL+  LE+RLD + +R  F PT+  ARQ VNH
Sbjct: 1   RFNYG-VSERQLVRYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNH 59

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVA 177
            HV VNGR  +I SY+CK GDV+ ++++           +     +VP ++ ++   + A
Sbjct: 60  GHVTVNGRVTDIASYQCKPGDVVAIRERKCSKQLAEGNLEFPGLANVPTHLELDKAKLSA 119

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +     + +   LVVE+YSR
Sbjct: 120 KVT---GRCEREWVALEINELLVVEYYSR 145


>gi|78102635|gb|ABB21531.1| small ribosomal protein 4 [Plagiochila corrugata]
          Length = 175

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 5/179 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+L+N   
Sbjct: 57  RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHILINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  +  ++ + 
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR 175


>gi|59803295|gb|AAX07756.1| Rps4 [Conocephalum conicum]
          Length = 153

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 5/155 (3%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             KQK++ ++G ++E++     + A +++G T   L+  LE RLD I++R    PTI  A
Sbjct: 1   EEKQKLRFHFG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGA 59

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171
           RQ VNHRH+L+N  +V+I SY CK  DVI +K + K  + + +  +  ++  +P ++S +
Sbjct: 60  RQLVNHRHILINNITVDIPSYNCKPKDVITIKDRQKSQSIITKNLKSFQKSKIPNHLSFD 119

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +     +I          + +   LVVE+YSR
Sbjct: 120 LIQIKGLVNQIIDR---EWIYLKINELLVVEYYSR 151


>gi|63145913|gb|AAY33894.1| small ribosomal protein 4 [Pallavicinia xiphoides]
          Length = 192

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQ-RRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           I RR+G  L G     + +R   PG   +     K S + ++L  KQK++ +YG ++E++
Sbjct: 1   IIRRLGA-LPGLSYKMLGSR---PGYTNRLTANKKISQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A  ++G T   L+  LE RLD IV+R    PTI AARQ VNHRH+++N   VN
Sbjct: 56  LLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTIPAARQLVNHRHIIINDNIVN 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKD 188
           I SY CK  DVI +  + +    + +   L  ER +P +++ +      +  +I      
Sbjct: 116 IPSYNCKPKDVITIGNRRESRLVITKNINLFRERRIPNHLTFDSTRFCGSVNQIIDR--- 172

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 173 EWISLKINELLVVEYYSR 190


>gi|99640040|emb|CAJ45145.1| putative ribosomal protein S4 gene [Sphaeropteris auriculifera]
          Length = 199

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TRS       Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKTSNPGETRSAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|305672371|gb|ADM63609.1| ribosomal protein S4 [Forstera bidwillii]
          Length = 173

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RTVSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNG  V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGCIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +      +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTIAARDEQKSKALIQNFLDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172


>gi|51458197|gb|AAU03445.1| ribosomal protein small subunit 4 [Asplenium protensum]
          Length = 188

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 21  QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 80  VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 VGDKT-PDHLTVSLAEGDKPAGLVNRV---ANRESINLNINELLVVEYYSR 186


>gi|117306738|emb|CAH73337.1| ribosomal protein S4 [Glyphothecium sciuroides]
          Length = 183

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE R D I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 57  TKGSTGEVLLQLLEMRSDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K +      + +     ++  +P +++ +         +I   L      + +   
Sbjct: 117 FIIIKNEKNSEGVINKNGDFHQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|165936370|ref|ZP_02224938.1| 30S ribosomal protein S4 (BS4) [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165915486|gb|EDR34095.1| 30S ribosomal protein S4 (BS4) [Yersinia pestis biovar Orientalis
           str. IP275]
          Length = 131

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 4/134 (2%)

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
           +KEA R +G+T  NL+  LE RLD +VYR  F  T   +RQ V+H+ ++VNGR VNI SY
Sbjct: 1   YKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKAIMVNGRVVNIASY 60

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           +    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M   F RIP         
Sbjct: 61  QVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKMEGVFKRIPERTD---LS 117

Query: 193 VIMQPNLVVEFYSR 206
             +  +L+VE YS+
Sbjct: 118 ADINEHLIVELYSK 131


>gi|32401864|gb|AAP80920.1| small ribosomal protein 4 [Torreya taxifolia]
          Length = 192

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N      G     +  KPS + + L+ KQ+++ +YG ++E++     + A 
Sbjct: 2   LPGLSKKTPNRIIEKSGKRKHSKPPKPSKYPVCLKEKQRLRFHYG-LTERQLLQYVRIAR 60

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R+ G T   L+  LE RLDTI++R     TI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 61  RANGPTGQVLLQLLEMRLDTIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 120

Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193
           D+I +K + +    + +   L++RD   VP ++++       +    +I  S +     +
Sbjct: 121 DLISIKDQQRSRNIINKNIDLSQRDKIWVPNHLNLKKKKSQYIGLVKKIVDSKR---ISL 177

Query: 194 IMQPNLVVEFYS 205
            +   LVVE+YS
Sbjct: 178 KINELLVVEYYS 189


>gi|12330490|gb|AAG52782.1| ribosomal protein 4 [Nyholmiella obtusifolia]
          Length = 189

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    S              S++ ++L  KQK + +YG I+E++  + 
Sbjct: 1   RLGVLPGLTNKTPQLKSSS---SIQSTSNKTISHYRIRLEEKQKXRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD +++R    PTI  ARQ VN RH++ B R V+I SY
Sbjct: 57  VRIARKAKGSTGEILLQLLEMRLDNVIFRLGMAPTIPGARQXVNXRHIIXBHRIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D I +K + K    +        +  +P +++ N         +I   L      
Sbjct: 117 RCKPXDFITIKNRQKSQDIITXNIDFNXKYKIPNHLTYNSLEKKGFVNQI---LDRELIG 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|86438876|emb|CAJ55417.1| small ribosomal protein 4 [Plagiochila ansata]
          Length = 164

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 5/165 (3%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+ FLE RLD 
Sbjct: 4   STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQFLEMRLDN 62

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R    PTI  ARQ VNHRH+ +N   V+I SY C+ GD+I ++ K K  +++ +   
Sbjct: 63  TIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIRNKQKSQSAITKNIN 122

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
              +  +P +++ +   +  +  ++ +        + +   LVVE
Sbjct: 123 SFHKLKIPSHLTFDSTQLRGSVNQMINR---EWINLKINELLVVE 164


>gi|52788791|gb|AAU87376.1| ribosomal protein small subunit 4 [Ceratopteris richardii]
          Length = 199

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+             Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKLMRRLNNLPGLVGKNKTFNLGESKVASDQSVSKKISQFCIRLEAKQRLRFNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A ++RG T   L+  LE RLD I+++     TI AARQ VNHRH+LVN R 
Sbjct: 60  RQLLKYVRIARKTRGSTGQVLLQLLEMRLDNIIFQLGLASTIPAARQLVNHRHILVNQRI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVATFVRIPS 184
           V+I SYR K  D+I ++ +     SV +      + +P++++++    D        +  
Sbjct: 120 VDIPSYRRKPKDIITIRNRPTSYNSVKK-ESFEGQKIPDHLTLSLLKTDQPTGLVNHM-- 176

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 177 -ASRESVDLNLNELLVVEYYSR 197


>gi|305672319|gb|ADM63583.1| ribosomal protein S4 [Mackinlaya confusa]
          Length = 173

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ YYG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQPRSGKKSQYRIRLEEKQKLRFYYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ +NHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLINHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|37548837|gb|AAO32687.1| ribosomal protein 4 [Dawsonia superba var. pulchra]
          Length = 175

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  K  ++ +YG I+E++  +  + A R++G T   L+  LE RLD I++
Sbjct: 12  NKKLSXYRIRLEEKXILRFHYG-ITERQLLNYVRIARRAKGSTGQILLHLLEMRLDNIIF 70

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R    PTI  ARQ VNH+H+LVN   VNI SYRCK  D I +K + K    ++     ++
Sbjct: 71  RLGMAPTIPGARQLVNHKHILVNDHIVNIPSYRCKPQDFITIKNRQKSQNIIVXNIDFSQ 130

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P ++  NH        +I   L      + +   LVVE+YSR
Sbjct: 131 KYKIPNHLIFNHLERKGLVNQI---LDRESIGLKINELLVVEYYSR 173


>gi|305672317|gb|ADM63582.1| ribosomal protein S4 [Tetradoxa omeiensis]
          Length = 173

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  + + +   ++P++++++         +I  +
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLESSPHEELPKHLTLHPFQYKGLVNQIIDN 172


>gi|305672187|gb|ADM63517.1| ribosomal protein S4 [Citronella suaveolens]
          Length = 173

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGLAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K  A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSFDSSPHEELPKHLTLHPFQYKGLVNQIIES 172


>gi|305672225|gb|ADM63536.1| ribosomal protein S4 [Adoxa moschatellina]
          Length = 173

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P         L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAVSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRMVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  + + +   ++P++++++         +I  +
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSLESSPHEELPKHLTLHAFQYKGLVNQIIDN 172


>gi|99640071|emb|CAJ45151.1| putative ribosomal protein S4 gene [Cyathea gibbosa]
          Length = 199

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR+       Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVD 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|89147822|gb|ABD62759.1| ribosomal protein 4 [Apotreubia nana]
          Length = 183

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 6/167 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG ++E++       A +++G T   L+  LE RLD I++
Sbjct: 19  NKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVDIARKAKGSTGEVLLQLLEMRLDNIIF 77

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--L 159
           R     TI  ARQ VNHRH+L+N ++VN+ SY CK  D+I V+ +      + +  +   
Sbjct: 78  RLGLAFTIPGARQLVNHRHILINNKTVNVPSYNCKPKDIITVQNRPTSQFLITKNIEDYS 137

Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  +P +++ +    +    +I          + +   LVVE+YSR
Sbjct: 138 NKYQIPNHLTFDSMKKMGLVNQIIDR---ELINLKINELLVVEYYSR 181


>gi|124021088|gb|ABM88817.1| small ribosomal protein subunit 4 [Aneura pinguis]
          Length = 184

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P +               K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GTLPGLTSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVF 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I SY C
Sbjct: 57  TARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
           K GDVI +  + K     + + Q  +  +P +++ +    V +  +I          + +
Sbjct: 117 KPGDVITINNREKCRLVNMNSLQ--KPAIPNHLTFDSKEFVGSVQQIIDRD---WIYLKI 171

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 172 NELLVVEYYSR 182


>gi|14090446|gb|AAK53508.1| small ribosomal protein 4 [Calymperes tuamotuense]
          Length = 182

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++  +  + A +++G T   L+  LE RLD I++R 
Sbjct: 21  KISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNIIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN R VNI SY+CK  D I +K + K    +++ +  + + 
Sbjct: 80  GIAPTIPGARQLVNHRHILVNNRIVNIPSYQCKLQDFITIKDQQKYQTMIVKNTNFSPKY 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P ++  N         ++   L      + +   LVVE+YSR
Sbjct: 140 KIPSHLMFNSVEKKGVVNQL---LDQESIGLKINELLVVEYYSR 180


>gi|78102641|gb|ABB21534.1| small ribosomal protein 4 [Plagiochila divergens]
          Length = 178

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 5/180 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD   +  K K  A V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYTCEPGDNNTIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRGSVNQMINRE 176


>gi|42524500|ref|NP_969880.1| 30S ribosomal protein S4 [Bdellovibrio bacteriovorus HD100]
 gi|81697762|sp|Q6MIP0|RS4B_BDEBA RecName: Full=30S ribosomal protein S4 B
 gi|39576709|emb|CAE80873.1| probable 30S ribosomal protein S4 [Bdellovibrio bacteriovorus
           HD100]
          Length = 208

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 9/203 (4%)

Query: 7   SKHKIDRRIGENLWGRPKS-PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
            + K  RR+   L G  K+  +  R Y PG HG +R+ K S F LQL  KQK++ +YG +
Sbjct: 8   PRFKRQRRLLTELPGMGKAGALERRPYPPGQHGLQRR-KYSEFALQLEEKQKLRFHYG-L 65

Query: 66  SEKKFRSIFKEADRSR-GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
            E++FR +  +A +S+  +    L++ LE RLD +V+R  F  +I AARQ V+H  VLVN
Sbjct: 66  REEQFRRLINKAKKSKATNWVEALVNLLEKRLDNVVFRLGFASSIPAARQLVSHGKVLVN 125

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN--HDNMVATFVRI 182
           G+ VNIGS   K GD I +K ++ Q    + A Q     +P +++               
Sbjct: 126 GKKVNIGSQIIKVGDKITLKDEAYQNQVYMAAKQAPRLPLPSFMAKEDVAGKEQGRLTDE 185

Query: 183 PSSLKDVPYPVIMQPNLVVEFYS 205
           P+       P   +P LV+ +YS
Sbjct: 186 PN---LEAVPFAFEPGLVIGYYS 205


>gi|184127985|gb|ACC67892.1| ribosomal protein small subunit 4 [Marattia howeana]
          Length = 184

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 15  QPASKKISQYCIRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +
Sbjct: 74  ILFRLGMSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLE 133

Query: 159 LAERD-VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +D +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 134 SLNKDQIPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 182


>gi|124021098|gb|ABM88822.1| small ribosomal protein subunit 4 [Aneura maxima]
          Length = 192

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR G       K+P +               K S + ++L  KQK++ +YG ++E++   
Sbjct: 3   RRPGTLPGLSSKTPGSKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLK 58

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
               A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I S
Sbjct: 59  YVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPS 118

Query: 133 YRCKEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           Y CK GDVI +  + K       + + L + ++P +++ +    + +  +I         
Sbjct: 119 YNCKPGDVITINNREKCRLVNWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WI 175

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 176 YLKINELLVVEYYSR 190


>gi|184127979|gb|ACC67889.1| ribosomal protein small subunit 4 [Marattia attenuata]
          Length = 164

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 8/166 (4%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S + ++L AKQ+++  YG ++E++     + A +++G     L+  LE RLD I++R  
Sbjct: 1   ISQYCIRLEAKQRLRFNYG-LTERQLLKYVRIAGKAKGSPGQVLLQLLEMRLDNILFRLG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD- 163
             PTI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +   +D 
Sbjct: 60  MSPTIPAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQ 119

Query: 164 VPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +PE+++++    +       RI +        + +   LVVE+YSR
Sbjct: 120 IPEHLTLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 162


>gi|320455046|dbj|BAJ65670.1| small ribosomal protein 4 [Metzgeria nudifrons]
          Length = 185

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 8/192 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-PEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  ++++E     ++ V P +++ +      +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSTIMERLNSLQKPVIPNHLAFDSTKFSGSVNRMINR- 175

Query: 187 KDVPYPVIMQPN 198
                 + +   
Sbjct: 176 --EXIDLKINEL 185


>gi|16930532|gb|AAL31951.1| ribosomal protein small subunit 4 [Asplenium cristatum]
          Length = 190

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 23  QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ + S 
Sbjct: 82  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 142 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 188


>gi|162415106|gb|ABX89127.1| ribosomal protein S4 [Tortula yuennanensis]
          Length = 189

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L   QK++  YG I+E++  +  + A +++G T   L+  LE RLD +V+R 
Sbjct: 28  KISQYRIRLEXXQKLRFXYG-ITERQLLNYVRIARKAKGSTGQVLLQLLEMRLDNVVFRL 86

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN   VNI SYRCK  D I +  + K    +++    +++ 
Sbjct: 87  GMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPPDFISIXDRXKSQXXIIKNXDFSQKS 146

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            VP ++S +         +I   L      + +   LVVE+YSR
Sbjct: 147 KVPNHLSFDFLQKKGLXNQI---LDRESIGLKIXELLVVEYYSR 187


>gi|17154710|emb|CAC83796.1| ribosomal protein S4 [Tritoniopsis unguicularis]
          Length = 183

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K   R+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E
Sbjct: 1   RFKKIPRLGGLPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTE 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 56  RQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRI 115

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSS 185
           V+I SYRCK  D+I  K K +  A +      +  + ++P +++++         +I  S
Sbjct: 116 VDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDS 175

Query: 186 LKDVPYPVIMQ 196
                  + + 
Sbjct: 176 K---WIGLKIN 183


>gi|51458082|gb|AAU03394.1| ribosomal protein small subunit 4 [Asplenium tricholepis]
          Length = 189

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG +SE +     + A ++RG T    +  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQRLRFNYG-LSECQLLRYVRIARKTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN   V+I SYRC   D+I V+ +     + L+   
Sbjct: 81  VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCNPKDIITVRNRPTSCNA-LKNRS 139

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 P+++SV+            R+          + +   LVVE+YSR
Sbjct: 140 FVGYKTPDHLSVSFSEGNGPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|74273137|gb|ABA01268.1| ribosomal protein S4 [Passiflora suberosa]
          Length = 190

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           + S +  +L+ KQ+++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 29  RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAER 162
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    + ++      +
Sbjct: 88  GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSFPRK 147

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P ++ +          +I          + +   LV+E+YSR
Sbjct: 148 KLPTHLILYRKEYKGLVNQIIDRK---WVGLKINELLVIEYYSR 188


>gi|305672249|gb|ADM63548.1| ribosomal protein S4 [Forgesia racemosa]
          Length = 173

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR ++
Sbjct: 56  LLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRILD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K    +  +   +   ++P +++++         +I  +
Sbjct: 116 IPSYRCKPRDTITARDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDN 172


>gi|305672255|gb|ADM63551.1| ribosomal protein S4 [Angelica sylvestris]
          Length = 173

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   + + ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLVNQIIDS 172


>gi|305672199|gb|ADM63523.1| ribosomal protein S4 [Dipsacus laciniatus]
 gi|305672269|gb|ADM63558.1| ribosomal protein S4 [Pterocephalodes hookeri]
          Length = 173

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G+      K P      G     Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGDLPGLTNKKP----RAGSDPRNQSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A + ++   +   ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQKSLDSSTHEELPKHLTLQSFQYKGLVNQIIDS 172


>gi|16565376|gb|AAL26203.1|AF313602_1 small ribosomal protein 4 [Osmunda banksiifolia]
          Length = 190

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     +N +     +  Q    K S F ++L AKQ+++  YG  +E++     + A
Sbjct: 1   DLPGLTNKILNPKKAQIAID-QSASKKISQFCIRLEAKQRLRFNYGS-TERQLLRYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD IV  +   PTI AARQ VNHRH+LVN   V+I SYRCK 
Sbjct: 59  RKAKGSTGQVLLQLLEMRLDNIVSESGMAPTIPAARQSVNHRHILVNDHIVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERD-VPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193
            D+  V+ ++     + +  + ++ D +P+++++     +       RI +        +
Sbjct: 119 RDITTVRDRTSSYDRITKEIESSQGDKIPDHLTLSLSEDNRPKGLVNRIVNRD---SIGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 NINELLVVEYYSR 188


>gi|118577579|gb|ABL07155.1| small ribosomal protein 4 [Piper glabrescens]
          Length = 148

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 5/150 (3%)

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           ++ +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VN
Sbjct: 1   LRFHYG-LTERQLIRYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMTSTIPGARQLVN 59

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176
           HRHVLVNGR V+I SYRCK  D+I  + + +    V  +   A R ++P++++++     
Sbjct: 60  HRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQNSMDSASREELPKHLTLDSSQYK 119

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I  S       + +   LVVE+YSR
Sbjct: 120 GVVNQIIDSK---GVGLKINELLVVEYYSR 146


>gi|99639966|emb|CAJ45130.1| putative ribosomal protein S4 gene [Cibotium schiedei]
          Length = 199

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 12/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+ +      K+     +       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKDLPGLTGKASNPRETRV--AADQSTSRKISQFCVRLEAKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH++VN R 
Sbjct: 58  RLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRI 182
           V++ SYRCK  D+I V+ +      +      + R  ++P++++   +  +       RI
Sbjct: 117 VDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTLSLLEGNRPKGLVNRI 176

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE+YSR
Sbjct: 177 ---ANRESIDLNINELLVVEYYSR 197


>gi|107770438|gb|ABF83760.1| small ribosomal protein 4 [Torreya nucifera]
          Length = 198

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
             R+   L G  K   N+ S   G     +  KPS + + L+ KQ+++ +YG ++E++  
Sbjct: 1   INRLKT-LPGLSKQTPNSNSEESGKRKHSKPPKPSKYPVCLKEKQRLRFHYG-LTERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+ G T   L+  LE RLDTI++R     TI  ARQ VNHRH+LVN R V+I 
Sbjct: 59  QYVRIARRANGPTGQVLLQLLEKRLDTIIFRLGMALTIPGARQLVNHRHILVNDRIVDIP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISV---NHDNMVATFVRIPSS 185
           SYRCK  D+I +K + +    + +   L++RD   VP ++++        +    +I  S
Sbjct: 119 SYRCKPQDLISIKDQQRSRNIINKNIDLSQRDKIWVPNHLNLKKKKKSQYIGLVKKIVDS 178

Query: 186 LKDVPYPVIMQPNLVVEFYS 205
            +     + +   LVVE+YS
Sbjct: 179 KR---ISLKINELLVVEYYS 195


>gi|289576438|dbj|BAI77793.1| ribosomal protein small subunit 4 [Hymenophyllum sp. Schuettpeltz
           283]
          Length = 195

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 10/199 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+ +      K      +       Q    K S F ++L AKQ+++  YG  +E++  
Sbjct: 1   IRRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I 
Sbjct: 58  RYVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGLSATIPAARQLVNHRHILVNNHIVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLK 187
           SYRCK  D+I V+ +    +   E    + R  +P++++ +             I     
Sbjct: 118 SYRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---AN 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 175 RESIDLNINELLVVEYYSR 193


>gi|99639995|emb|CAJ45136.1| putative ribosomal protein S4 gene [Cyathea parvula]
          Length = 199

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR+       Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKTSNPGETRTAAD----QSVSRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R  ++P++++   +  +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTISLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|184128077|gb|ACC67938.1| ribosomal protein small subunit 4 [Psilotum nudum]
          Length = 183

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + L+L AKQ+++  YG ++E++       A ++RG T   L+  LE RLD 
Sbjct: 14  QSTSKKRSQYSLRLEAKQRLRFNYG-VTERQLLKYVCIAKKARGSTGQVLLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN + V+I SYRCK  D+I V+   K    +    +
Sbjct: 73  IIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSYRCKPNDIITVRDHQKSQELIKRNIK 132

Query: 159 LAE-RDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           LA+  ++P +++   +          +I          + +   LVVE+YSR
Sbjct: 133 LAKIDEIPSHLNISYLEETKPKGFINKIVDRG---SIGLEINELLVVEYYSR 181


>gi|117306740|emb|CAH73338.1| ribosomal protein S4 [Hampeella alaris]
          Length = 183

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 7/187 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G        +S         +K   S + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   GLTNKIPQLKSNSINQSTSTKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKA 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 58  KGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
           I VK        + +    +++  +P ++  +         +I   L      + +   L
Sbjct: 118 IIVKNLKSSEVIINKNKDFSQKYKIPNHLIYSSLEKKGLVSKI---LDRESIGLKINELL 174

Query: 200 VVEFYSR 206
           VVE+YSR
Sbjct: 175 VVEYYSR 181


>gi|51458095|gb|AAU03399.1| ribosomal protein small subunit 4 [Asplenium myriophyllum]
          Length = 190

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 23  QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ + S 
Sbjct: 82  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 142 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 188


>gi|305672197|gb|ADM63522.1| ribosomal protein S4 [Schefflera monticola]
 gi|305672209|gb|ADM63528.1| ribosomal protein S4 [Polyscias guilfoylei]
 gi|305672215|gb|ADM63531.1| ribosomal protein S4 [Tetraplasandra oahuensis]
 gi|305672233|gb|ADM63540.1| ribosomal protein S4 [Cussonia spicata]
 gi|305672325|gb|ADM63586.1| ribosomal protein S4 [Pseudopanax colensoi]
 gi|305672349|gb|ADM63598.1| ribosomal protein S4 [Aralia spinosa]
          Length = 173

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +      +  +   +  D +P++++++         +I  S
Sbjct: 116 IASYRCKPRDIITARDEENSRTLIQNSLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|305672381|gb|ADM63614.1| ribosomal protein S4 [Valdivia gayana]
          Length = 173

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR ++
Sbjct: 56  LLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRILD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K    +  +   +   ++P +++++         +I   
Sbjct: 116 IPSYRCKPRDTITARDEQKSRTLIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDK 172


>gi|305672203|gb|ADM63525.1| ribosomal protein S4 [Desfontainia spinosa]
          Length = 173

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK+  +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLCFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K  A +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSFDSSPHEELPKHLTLHPFQYKGLVNKIIDS 172


>gi|99639901|emb|CAJ45121.1| putative ribosomal protein S4 gene [Alsophila bryophila]
 gi|99639957|emb|CAJ45128.1| putative ribosomal protein S4 gene [Cibotium glaucum]
 gi|99639962|emb|CAJ45129.1| putative ribosomal protein S4 gene [Cibotium nealiae]
          Length = 199

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+ +      K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKDLPGLTGKASNPGETRVAAD----QSTSRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH++VN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R   +P++++   +  +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLTLSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|45271092|gb|AAS56930.1| ribosomal protein small subunit 4 [Hymenasplenium unilaterale]
          Length = 190

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 23  QSTSRKISQFCIRLEAKQRLRFNYG-LTERQLLRYVRIARKTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L+   
Sbjct: 82  VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDIITVRNRPTSC-NALKGES 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   + P++++V     D        +          + +   LVVE+YSR
Sbjct: 141 LGGDETPDHLTVSLSEGDRPTGLVNHV---ANRESVNLNINELLVVEYYSR 188


>gi|320455038|dbj|BAJ65666.1| small ribosomal protein 4 [Metzgeria caledonica]
          Length = 185

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTNKTFKSKSSY---IDRPASNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSSL 186
           V+I SY CK GD+I +K + +  ++++E     ++  +P +++ +    + +  ++ +  
Sbjct: 117 VDIPSYNCKLGDIITIKNQKRNRSNIMETLNSVQKPGIPNHLAFDSTKFIGSVNQMINR- 175

Query: 187 KDVPYPVIMQPN 198
                 + +   
Sbjct: 176 --EXIDLEINEL 185


>gi|78102711|gb|ABB21569.1| small ribosomal protein 4 [Plagiochila propinqua]
          Length = 175

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 5/179 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           V+I SY C+ GD+I ++ K K  + V +   L ++  +P +++ +   +  +  ++ + 
Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNINLFQKLKIPSHLTFDSTQLRGSVNQMINR 175


>gi|184128081|gb|ACC67940.1| ribosomal protein small subunit 4 [Helminthostachys zeylanica]
          Length = 170

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQK++  +G ++E++     + A R+ G T    +  LE RLD 
Sbjct: 1   QSISRKISQYCIRLEAKQKLRFNHG-LTERQLLKYVRTARRASGSTGQVSLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157
           I++R    PTI  ARQ VNHRH+LVN R V+I SY CK  DVI V+ ++     +  +  
Sbjct: 60  IIFRLGISPTIPGARQLVNHRHILVNDRIVDIPSYHCKANDVITVRDQNNSRNLIGKDVG 119

Query: 158 QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             AE  +P ++S+     D +     R+          + +   L+VE+YSR
Sbjct: 120 SSAEGRIPNHLSLSLSEDDKLKGFVNRMIDR---ESIGLKVNELLIVEYYSR 168


>gi|51458103|gb|AAU03403.1| ribosomal protein small subunit 4 [Asplenium marinum]
          Length = 190

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 23  QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ + S 
Sbjct: 82  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 142 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 188


>gi|289576420|dbj|BAI77784.1| ribosomal protein small subunit 4 [Hymenophyllum frankliniae]
          Length = 190

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A
Sbjct: 1   DLPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK 
Sbjct: 59  RKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPV 193
            D+I V+ +    +   E  + ++R  +P++++ +             I          +
Sbjct: 119 KDLITVRNRPSSYSGSKENIEFSQRKKIPDHLTFSFSEDNRPKGLVNGI---ANRESIDL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 NINELLVVEYYSR 188


>gi|305672251|gb|ADM63549.1| ribosomal protein S4 [Pseudonemacladus oppositifolius]
          Length = 170

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KSP   R+       Q    K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKSPKAVRN-------QLGSGKKSQYRIRLEEKQKLRFHYG-LTERQ 52

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 53  LLKYVRIAGKAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 112

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  K + K  A +  +   +  +++  +++ +         +I  S
Sbjct: 113 IPSYRCKPRDTITAKDERKSKALIQNSLDSSPHKELANHLTFDPVQYKGLVNQIIDS 169


>gi|86438882|emb|CAJ55418.1| small ribosomal protein 4 [Plagiochila crozetensis]
          Length = 176

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 7/182 (3%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     + ++S    +       K S + ++L  KQK++ +YG ++E++     + A 
Sbjct: 1   LPGLTSKALKSKSSY--IDRSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLKYMRIAR 57

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I SY C+ G
Sbjct: 58  KAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPG 117

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I ++ K K  + + +     ++  +P +++ +   +  +  ++ +        + +  
Sbjct: 118 DIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQLRGSVNQMINR---EWINLKINE 174

Query: 198 NL 199
            L
Sbjct: 175 LL 176


>gi|305672355|gb|ADM63601.1| ribosomal protein S4 [Heteromorpha arborescens var. abyssinica]
          Length = 173

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGSLPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +    ++ ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSSQEELPKHLTLQPFQYKGLVNQIIDS 172


>gi|305672331|gb|ADM63589.1| ribosomal protein S4 [Myodocarpus crassifolius]
          Length = 173

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMATTIPGARQLVNHRHILVNGGIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  K +      +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITAKDEQNSRVLIQNSLDSSSHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|51860565|gb|AAU11419.1| ribosomal protein small subunit 4 [Ephedra distachya subsp.
           helvetica]
          Length = 197

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 14/203 (6%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEK 68
           KI RR+        K P   +     +H   R   K S + + L+ KQK++ +YG ++E+
Sbjct: 1   KIIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           + R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V
Sbjct: 56  QLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIP 183
           +I SYRCK  D+I +K K  +   +       +       VP Y++ N         +I 
Sbjct: 116 DIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKII 175

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            +       + ++  LV+E+YSR
Sbjct: 176 DTKD---LQLKIKEMLVIEYYSR 195


>gi|99640030|emb|CAJ45143.1| putative ribosomal protein S4 gene [Lophosoria quadripinnata]
          Length = 199

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH++VN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|305672227|gb|ADM63537.1| ribosomal protein S4 [Donatia fascicularis]
          Length = 173

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNDRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  + + K  A +  +   +   ++P +++++         +I  S
Sbjct: 116 IPSYRCKPRDTITARDEQKSRALIQNSLDSSPHEELPNHLTLHPFQYKGLVNQIIDS 172


>gi|124021086|gb|ABM88816.1| small ribosomal protein subunit 4 [Aneura pinguis]
          Length = 187

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K+P +   +           K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GTLPGLTSKTPGSKVGFSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVF 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I SY C
Sbjct: 57  TARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNC 116

Query: 136 KEGDVIEVKQKSKQLASV-LEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K GDVI +  + K       + + L + ++P +++ +    + +  +I          + 
Sbjct: 117 KPGDVITINNREKCRLENWRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLK 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|99639985|emb|CAJ45134.1| putative ribosomal protein S4 gene [Cyathea arborea]
          Length = 198

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)

Query: 9   HKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K+ RR+        K+  P  TR+       Q    K S F ++L AKQ+++  YG ++
Sbjct: 1   LKVIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R
Sbjct: 56  ERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDR 114

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVR 181
            V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       R
Sbjct: 115 IVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVNR 174

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 175 I---ANRESIELNINELLVVEYYSR 196


>gi|23477318|gb|AAN34635.1| ribosomal protein small subunit 4 [Hymenasplenium cheilosorum]
          Length = 185

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 18  QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ + S 
Sbjct: 77  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 136

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 137 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 183


>gi|87311708|ref|ZP_01093824.1| 30S ribosomal protein S4 [Blastopirellula marina DSM 3645]
 gi|87285602|gb|EAQ77520.1| 30S ribosomal protein S4 [Blastopirellula marina DSM 3645]
          Length = 188

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 6/182 (3%)

Query: 25  SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
              + R+  PG+H   R  +PS +G  L  KQK+K YYG + E++ R  F+ A   +G+T
Sbjct: 13  KGYDRRATPPGMH--TRPRRPSNYGAALMEKQKIKHYYG-LGERQLRRYFEMAKHMKGNT 69

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              L+   E RLD +V R+    T   ARQ + H H LVNG  V+  S++ + GDV+ V+
Sbjct: 70  GEQLLVLCERRLDNVVRRSGMALTRPQARQGIVHGHFLVNGAKVDKPSFQMRPGDVVSVR 129

Query: 145 QKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
            + K               V E++S + + + A+F  IP++  DV  PV +   +VVEF 
Sbjct: 130 NREKLQILYRSILGENGSQVAEFVSSDQETLSASFDSIPTAG-DVSLPVDVN--MVVEFM 186

Query: 205 SR 206
           SR
Sbjct: 187 SR 188


>gi|170516221|gb|ACB15112.1| small ribosomal protein 4 [Tetraclinis articulata]
          Length = 200

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+        K+P   R   P      +  KPS + ++L+ KQ+++ +YG + E
Sbjct: 1   RLKIISRLKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 58  RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRI 182
           V+I SYRCK  D+I +K+K      + +  ++ ++D   VP +++             +I
Sbjct: 118 VDIPSYRCKPHDLISIKEKEGLRNIIKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             + +     + +   LVVE+YSR
Sbjct: 178 IDNKR---IGLKINELLVVEYYSR 198


>gi|117306736|emb|CAH73336.1| ribosomal protein S4 [Glyphothecium sciuroides]
          Length = 183

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLPNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 57  TKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K K      + +     ++  +P +++ +         +I   L      + +   
Sbjct: 117 FIIIKNKQNSEVVINKNKDFYQKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLRINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|78102629|gb|ABB21528.1| small ribosomal protein 4 [Plagiochila bicornuta]
          Length = 172

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 5/176 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGSLPGLTSKALKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFHLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           V+I SY C+ GD+I +K K K  + V +     ++  +P +++ +   + A+  ++
Sbjct: 117 VDIPSYNCEPGDIITIKNKQKSQSIVAKNINSFQKLKIPSHLTFDSTQLRASVNQM 172


>gi|99640060|emb|CAJ45149.1| putative ribosomal protein S4 gene [Sphaeropteris tomentosissima]
          Length = 199

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|255020792|ref|ZP_05292850.1| SSU ribosomal protein S4p (S9e) [Acidithiobacillus caldus ATCC
           51756]
 gi|254969788|gb|EET27292.1| SSU ribosomal protein S4p (S9e) [Acidithiobacillus caldus ATCC
           51756]
          Length = 159

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 94/163 (57%), Gaps = 5/163 (3%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S +G QLR KQK+++ YG + E +FR  F+ A ++RG T   L+ FLE RLD + YR  
Sbjct: 1   MSEYGTQLREKQKIRRIYGVL-EGQFRRYFERASQTRGVTGELLLRFLELRLDNVAYRLG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EASQLAERD 163
           +  +   ARQ V H H+ VNGR V+I SY+ + GDV+ V + ++Q A +L      A R 
Sbjct: 60  YGSSRAEARQVVRHGHITVNGRRVDIPSYQVRAGDVVAVAESARQHARILAAVEAAAARG 119

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            PE++SV+  N+ AT   +P      P    +   +VVE YS+
Sbjct: 120 FPEWLSVDSANLQATVKAVPVREDMAP---DLNEQVVVELYSK 159


>gi|157689428|gb|ABV65270.1| ribosomal protein S4 [Bruguiera gymnorhiza]
          Length = 148

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 5/150 (3%)

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           M+ +YG ++E++     + A +++G T   L+  +E RLD I++R     TI  ARQ VN
Sbjct: 1   MRFHYG-LTERQLLKYVRIAAKAKGSTGQVLLQLVEMRLDNILFRLGMASTIPRARQLVN 59

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMV 176
           HRH+LVNGR V+I SYRCK  D+I  + + K    +        + ++P +++++     
Sbjct: 60  HRHILVNGRIVDIPSYRCKPRDIITARDEQKSRTMIQNYLDSFPQEELPNHLTLHPFQYK 119

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +I  S       + +   LVVE+YSR
Sbjct: 120 GLVNQIIDSK---WVVLKINELLVVEYYSR 146


>gi|305672375|gb|ADM63611.1| ribosomal protein S4 [Hydrocotyle vulgaris]
          Length = 173

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTTKRP----RVGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  K +      +      +  D +P++++++         +I  S
Sbjct: 116 IASYRCKPRDIITAKDEENSRTLIQNYLDSSSHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|117306732|emb|CAH73334.1| ribosomal protein S4 [Ptychomnion ptychocarpon]
          Length = 183

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKIPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 57  AKGSTGEILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K +      + + +   ++  +P +++ +         +I   L      + +   
Sbjct: 117 FIIIKNQQNFEIVINKNTDFYQKYKIPNHLTYSSLEKKGLVNKI---LDRESIGLKINEL 173

Query: 199 LVVEFYSR 206
           LVVE+YSR
Sbjct: 174 LVVEYYSR 181


>gi|99640001|emb|CAJ45137.1| putative ribosomal protein S4 gene [Cyathea speciosa]
          Length = 198

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)

Query: 9   HKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K+ RR+        K+  P  TR+       Q    K S F ++L AKQ+++  YG ++
Sbjct: 1   LKVIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R
Sbjct: 56  ERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDR 114

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVR 181
            V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       R
Sbjct: 115 IVDVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVDR 174

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 175 I---ANRESIDLNINELLVVEYYSR 196


>gi|305672307|gb|ADM63577.1| ribosomal protein S4 [Triosteum perfoliatum]
          Length = 167

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P++          Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTKKGPID----------QSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 50  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  + +P+++++          +I  S
Sbjct: 110 IPSYRCKPQDIITARDEQNSRALIQNSLDSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166


>gi|289576424|dbj|BAI77786.1| ribosomal protein small subunit 4 [Hymenophyllum minimum]
          Length = 194

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K      +       Q    K S F ++L AKQ+++  YG  +E++   
Sbjct: 1   RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I S
Sbjct: 58  YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNNIVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188
           YRCK  D+I V+ +    +   E    + R  +P++++ +            RI      
Sbjct: 118 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNRI---ANR 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 ESIDLNINELLVVEYYSR 192


>gi|107770436|gb|ABF83759.1| small ribosomal protein 4 [Torreya grandis]
          Length = 198

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
             R+   L G  K   N      G     +  KPS + + L+ KQ+++ +YG ++E++  
Sbjct: 1   INRLKT-LPGLSKKTPNRIIEKSGKRKHSKPPKPSKYPVCLKEKQRLRFHYG-LTERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+ G T   L+  LE RLDTI++R     TI  ARQ VNHRH+LVN R V+I 
Sbjct: 59  QYVRIARRANGPTGQVLLQLLEMRLDTIIFRLGMALTIPGARQLVNHRHILVNDRIVDIP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDV---PEYISVNHDNMV---ATFVRIPSS 185
           SYRCK  D+I +K + +    + +   L++RD    P +++              +I  S
Sbjct: 119 SYRCKPQDLISIKDQQRSRNIINKNIDLSQRDKIWGPNHLNFLKKKKSQYIGLVKKIVDS 178

Query: 186 LKDVPYPVIMQPNLVVEFYS 205
            +     + +   LVVE+YS
Sbjct: 179 KR---ISLKINELLVVEYYS 195


>gi|305672201|gb|ADM63524.1| ribosomal protein S4 [Tetrapanax papyrifer]
          Length = 173

 Score =  140 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +      +  +   +   ++P++++++         +I  S
Sbjct: 116 IASYRCKPRDIITARDEENSRTLIQNSLDSSSYDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|289576436|dbj|BAI77792.1| ribosomal protein small subunit 4 [Hymenophyllum perrieri]
          Length = 195

 Score =  140 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K      +       Q    K S F ++L AKQ+++  YG  +E++   
Sbjct: 2   RRLKDLPGLTNKKLNVKEARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 58

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I S
Sbjct: 59  YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPS 118

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188
           YRCK  D+I V+ +    +   E    + R  +P++++ +             I      
Sbjct: 119 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESIDLNINELLVVEYYSR 193


>gi|124021084|gb|ABM88815.1| small ribosomal protein subunit 4 [Aneura mirabilis]
          Length = 192

 Score =  140 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 8/196 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR         K+P                 K S + ++L  KQK++ +YG ++E++  
Sbjct: 2   IRRQATLPGLTSKTPGTKVGSSD---RSTSSKKISQYRIRLEEKQKLRLHYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A  ++G T   L+  LE RLD  ++R   VPTI AARQ VNHRHV +N   ++I 
Sbjct: 58  KYVFTARGAKGSTGQLLLQLLEMRLDNTIFRLGIVPTIPAARQLVNHRHVSINEHIIDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           SY CK GDVI +  + K            ++ ++P +++ +    + +  +I        
Sbjct: 118 SYNCKPGDVITINNREKCRLVDRRDMNSLQKPEIPNHLTFDSKEFLGSVQQIIDRD---W 174

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 175 IDLKINELLVVEYYSR 190


>gi|305672303|gb|ADM63575.1| ribosomal protein S4 [Columellia oblonga]
          Length = 173

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K  A +  +   +   ++P+++++      A+  +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSLDSSPPEELPKHLALQPFQYKASVNQIIDS 172


>gi|52788815|gb|AAU87381.1| ribosomal protein small subunit 4 [Saccoloma inaequale]
          Length = 193

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 10/198 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+  NL G      N       ++ Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   IRRLK-NLPGLTGETSNLGETRV-VNDQSGSKKISQFCVRLEAKQRLRFSYG-LTERQPL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A +++G T    +  LE RLD +++      TI AARQ VNHRH+LVN R V+I 
Sbjct: 58  NYVRIARKTKGSTGQVSLQLLEMRLDNVIFHPGVASTIPAARQLVNHRHILVNNRIVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKD 188
           SYRC+  D+I V+ +    ++VL  +      +P+++++             RI      
Sbjct: 118 SYRCEPKDIITVRNRPTS-SNVLRNASFGRDKIPDHLTLSLTEGSRPTGLVNRI---ANR 173

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 174 ESVDLNINELLVVEYYSR 191


>gi|260222204|emb|CBA31533.1| 30S ribosomal protein S4 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 137

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/137 (41%), Positives = 82/137 (59%), Gaps = 11/137 (8%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
           M++    K K+ RR G +L+ +        K+  +++   PG HG+   ++ S +GLQLR
Sbjct: 1   MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSK---PGQHGRTSGARTSDYGLQLR 57

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            KQK+K+ YG + E++FR  F EADR RG+T  NL+  LESRLD +VYR  F  T   AR
Sbjct: 58  EKQKVKRMYGVL-ERQFRRYFAEADRRRGNTGANLMVLLESRLDNVVYRMGFGSTRAEAR 116

Query: 114 QFVNHRHVLVNGRSVNI 130
           Q V+H+ + VNG  V  
Sbjct: 117 QLVSHKAITVNGNPVTF 133


>gi|51860461|gb|AAU11367.1| ribosomal protein small subunit 4 [Gnetum gnemon]
          Length = 195

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 10/200 (5%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           KI RR+        K P   +         R   K S     L+ KQK++ ++G ++E++
Sbjct: 1   KIIRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSQHLACLQEKQKIRFHFG-LTERQ 56

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
            R   + A + +G T   L+  LE RLD I+Y+     TI  ARQ VNHRH+LVN   VN
Sbjct: 57  LRQYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLAGTIPGARQLVNHRHILVNDYVVN 116

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSL 186
           I SYRCK  DVI +K K+      +     ++  E+ +P +++++         +I    
Sbjct: 117 IPSYRCKPQDVITIKGKNPDQLKTIITRNRNKAREKKIPYHLTLDLSQNKGIVNKIIDRK 176

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + ++  LV+E+YSR
Sbjct: 177 D---IQLNIKEMLVIEYYSR 193


>gi|325973258|ref|YP_004250322.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois]
 gi|325989693|ref|YP_004249392.1| 30S ribosomal protein S4 [Mycoplasma suis KI3806]
 gi|323574778|emb|CBZ40438.1| 30S ribosomal protein S4 [Mycoplasma suis]
 gi|323651860|gb|ADX97942.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois]
          Length = 202

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 102/206 (49%), Gaps = 10/206 (4%)

Query: 1   MSKRESSKHKIDRRIGENLW--GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
           MS+     +K  R+ G + +  GR  S    R YGPG HG  +  K S  G QLR KQK+
Sbjct: 1   MSRYLGPLYKKSRQHGFSFYEDGREFSKGKQREYGPGQHGPTKFKKLSLHGEQLREKQKL 60

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
              YG + EK+ R  FK A +  G  + N +  LES+LD +V+RA    T  AARQ + H
Sbjct: 61  AILYG-LREKQMRRFFKMAQKMPGSLALNFLILLESKLDNLVFRAGMANTRRAARQLIVH 119

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVAT 178
            H+ +NG+ V+I SY      VIEV +KS+ +  V   +         +I ++H    A 
Sbjct: 120 GHIRLNGKKVDIPSYVVPPSSVIEVAEKSRDIPVV---NYFKHFTPLPFIQLDH-KYRAV 175

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFY 204
           ++R P   +     + +      E+Y
Sbjct: 176 YLRYPERSE---MNLELNEVFATEWY 198


>gi|305672253|gb|ADM63550.1| ribosomal protein S4 [Lonicera japonica]
          Length = 167

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P+          GQ R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTKKGPI----------GQSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 50  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  + +P+++++          +I  S
Sbjct: 110 IPSYRCKPRDIITARDEQNSRALIQNSLNSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166


>gi|99640006|emb|CAJ45138.1| putative ribosomal protein S4 gene [Dicksonia arborescens]
 gi|99640011|emb|CAJ45139.1| putative ribosomal protein S4 gene [Dicksonia gigantea]
 gi|99640020|emb|CAJ45141.1| putative ribosomal protein S4 gene [Dicksonia thyrsopteroides]
          Length = 199

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +   +  + R  ++P +++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGTNESSRGDEIPNHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|46811032|gb|AAT01834.1| small ribosomal protein 4 [Monoclea gottschei subsp. elongata]
          Length = 179

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R
Sbjct: 10  INQSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMR 68

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R   V T+  ARQ VNHRH+L+N   V+I SY CK  DVI +K + K  + + +
Sbjct: 69  LDNILFRLGMVLTVPGARQLVNHRHILINNNMVDIPSYNCKPKDVITIKDRPKSQSIITK 128

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P ++S +   +     ++          + +   LVVE+YSR
Sbjct: 129 NLNSFQKSKIPNHLSFDLMQVKGLVNQMIDR---ESILLKINELLVVEYYSR 177


>gi|18027944|gb|AAL55896.1| ribosomal protein S4 [Onychium japonicum]
          Length = 191

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSVLKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRCK  D+I ++ ++    +V +   
Sbjct: 83  IIFRLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDIITIRNRTTSH-NVAKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +A   +P++++++            ++          + +   LVVE+YSR
Sbjct: 142 IAGGGIPDHLTLSLSKTGEPAGLVNQM---ANRESVDLDINELLVVEYYSR 189


>gi|99640055|emb|CAJ45148.1| putative ribosomal protein S4 gene [Sphaeropteris novaecaledoniae]
          Length = 199

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|63101027|gb|AAY33138.1| small ribosomal protein 4 [Leptohymenium tenue]
          Length = 151

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 5/153 (3%)

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQK++ +YG I+E++  +  + A +++G T   L+  +E RLD +++R    PTI  ARQ
Sbjct: 1   KQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLIEMRLDNVIFRLGMAPTIPGARQ 59

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD 173
            VNHRH+LVN   V+I SYRCK  D I +K + K    + +  +  ++  +P +++ +  
Sbjct: 60  LVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIINKNIEFYQKYKIPNHLTYSSL 119

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I   L      + +   LVVE+YSR
Sbjct: 120 EKKGLVNQI---LDRESIGLKINELLVVEYYSR 149


>gi|171473924|gb|AAX24501.3| SJCHGC09636 protein [Schistosoma japonicum]
          Length = 139

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 3/141 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      K  RR+  +L G  K+    R + PG HG+ R  +  Y   QL+ KQK + 
Sbjct: 1   MARYTGPITKKSRRLKTDLVGGDKN-FEMRPFPPGQHGRGRVQEKEYL-TQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+F   +KEA R +G T  NL+  LESRLD++VYRA    T   ARQ V H H
Sbjct: 59  TYG-VMEKQFVRYYKEAARRQGKTGENLLVILESRLDSVVYRAGLARTRRGARQMVTHGH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVI 141
             VNG+ V++ SYR ++ D+I
Sbjct: 118 FEVNGKRVDVPSYRVEQYDII 138


>gi|305672213|gb|ADM63530.1| ribosomal protein S4 [Phyllonoma laticuspis]
          Length = 173

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P         +  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKVRRLGALPGLTNKRP----RTVNDIRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I S+RCK  D+I  + + K +A + ++   +  + VP++++++         +I  S
Sbjct: 116 IPSFRCKPRDIITTRDEQKSIARIQKSLDSSPHEAVPKHLTLHPLQYKGLVNQIIDS 172


>gi|289576434|dbj|BAI77791.1| ribosomal protein small subunit 4 [Hymenophyllum kuhnii]
          Length = 195

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K      +       Q    K S F ++L AKQ+++  YG  +E +   
Sbjct: 2   RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TEHQLLK 58

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I S
Sbjct: 59  YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPS 118

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188
           YRCK  D+I V+ +    +   E    + R  +P++++ +             I      
Sbjct: 119 YRCKPKDLITVRNRPSSYSGSKEKIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESIDLNINELLVVEYYSR 193


>gi|14090460|gb|AAK53515.1| small ribosomal protein 4 [Exostratum blumei]
          Length = 182

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++  +  + A + +G T   L+  LE RLD I++R 
Sbjct: 21  KISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKVKGSTGQVLLQLLEMRLDNIIFRL 79

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN   VNI SY+CK  D I +K + K    + + +    + 
Sbjct: 80  GLAPTIPGARQLVNHRHILVNNLIVNIPSYQCKPQDFITIKDQKKYQKMITKNTNFFPKY 139

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P ++  N         +I   L      + +   LVVE+YSR
Sbjct: 140 KTPNHLIFNSVEKKGLVNQI---LDQEAIGLKINELLVVEYYSR 180


>gi|51458125|gb|AAU03412.1| ribosomal protein small subunit 4 [Diellia erecta]
 gi|51458127|gb|AAU03413.1| ribosomal protein small subunit 4 [Diellia falcata]
 gi|51458130|gb|AAU03414.1| ribosomal protein small subunit 4 [Diellia pallida]
 gi|51458132|gb|AAU03415.1| ribosomal protein small subunit 4 [Diellia unisora]
 gi|51458134|gb|AAU03416.1| ribosomal protein small subunit 4 [Diellia x lauii]
          Length = 185

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 18  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 77  VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPTDFITVRNRPTSCNAMKNKSL 136

Query: 159 LAERDVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V+    D        +          + +   LVVE+YSR
Sbjct: 137 VGDKT-PDHLTVSLSGGDRPTGLVNGV---ANRESINLNINELLVVEYYSR 183


>gi|99640015|emb|CAJ45140.1| putative ribosomal protein S4 gene [Dicksonia squarrosa]
          Length = 199

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKASNPGETRVAAD----QSASKKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +   +  + R  ++P +++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGTNESSRGDEIPNHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +I          + +   LVVE+YSR
Sbjct: 175 QI---ANRESIDLNINELLVVEYYSR 197


>gi|219973352|gb|ACL68562.1| ribosomal protein small subunit 4 [Marsilea mexicana]
          Length = 187

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 1   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVNGR V++ SYRC+  
Sbjct: 56  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNGRIVDVPSYRCEPQ 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 116 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 172

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 173 NINELLIVEYYSR 185


>gi|165979144|gb|ABY77015.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979146|gb|ABY77016.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979150|gb|ABY77018.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979152|gb|ABY77019.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979154|gb|ABY77020.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979156|gb|ABY77021.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979158|gb|ABY77022.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979160|gb|ABY77023.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979162|gb|ABY77024.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979164|gb|ABY77025.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979166|gb|ABY77026.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
 gi|165979168|gb|ABY77027.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
          Length = 188

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 186


>gi|219973432|gb|ACL68602.1| ribosomal protein small subunit 4 [Marsilea polycarpa]
 gi|219973434|gb|ACL68603.1| ribosomal protein small subunit 4 [Marsilea polycarpa]
          Length = 188

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S F ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSVLEGNKPKGVVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|99639907|emb|CAJ45122.1| putative ribosomal protein S4 gene [Alsophila capensis]
          Length = 199

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R   +P++++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ASRESIDLNINELLVVEYYSR 197


>gi|78102679|gb|ABB21553.1| small ribosomal protein 4 [Plagiochila korthalsiana]
          Length = 172

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 5/176 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +         S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTGKTLKSKSSY---IDRSTPNKXVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHIAINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           VNI SY C+ GD+I +  K K  + V +     ++  +P +++ +   +  +  ++
Sbjct: 117 VNIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDSTQLQGSVSQM 172


>gi|18027936|gb|AAL55892.1| ribosomal protein S4 [Actiniopteris australis]
          Length = 191

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+ ++          Q    K S F ++L AKQ+++  YG ++E++     + A
Sbjct: 3   LPGLVGKNKMSNSGEFRVASDQSVSKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIA 61

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            ++RG T    +  LE RLD I++R     TI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 62  RKTRGSTGQVPLQLLEMRLDNIIFRLGMASTIPAARQLVNHRHILVNYRIVDIPSYRCKP 121

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194
            D+I ++ ++    +V +   +    +P++++++      +      +          + 
Sbjct: 122 RDIITIRNRTTSH-NVSKVESIPGGGIPDHLTLSFSKTGELAGLVNHM---ANRESIDLD 177

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 178 INELLVVEYYSR 189


>gi|80974148|gb|ABB53767.1| small ribosomal subunit protein 4 [Garovaglia baeuerlenii]
          Length = 176

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T    +   E RLD 
Sbjct: 10  STSNKKISQYRVRLEEKQKLRFHYG-ITERQLLNYVRIARKTKGSTGEVSLQLPEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I VK +      + +   
Sbjct: 69  IIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQDFIIVKNEKNSEGIINKDGD 128

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  +P +++           ++   L      + +   LVVE+YSR
Sbjct: 129 FHQKYKIPNHLTYIFLEKKGLVNKL---LDRESIGLKINELLVVEYYSR 174


>gi|305672185|gb|ADM63516.1| ribosomal protein S4 [Leycesteria formosa]
          Length = 167

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P++          Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTKKGPID----------QSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 50  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  + +P+++++          +I  S
Sbjct: 110 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166


>gi|80974142|gb|ABB53764.1| small ribosomal subunit protein 4 [Euptychium mucronatum]
          Length = 168

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R D 
Sbjct: 2   STSNKKISQYRIRLEEKQKLRFHYG-ITEQQLLNYVRIARKTKGSTGEVLLQLLEMRSDN 60

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D I VK +      + +   
Sbjct: 61  IIFRLGMAPTISGARQLVNHRHILVNDCIVNIPSYRCKPQDFIIVKNEKNSEGIINKNGD 120

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  +P +++           +I   L      + +   LVVE+YSR
Sbjct: 121 FHQKSKIPNHLTYIFLEKKGLVNKI---LDRESIGLKINELLVVEYYSR 166


>gi|305672345|gb|ADM63596.1| ribosomal protein S4 [Symphoricarpos sp. Donoghue & Winkworth 28]
          Length = 167

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P++          Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTQKGPID----------QSRSVKKSQYRIRLEEKQKLRFHYG-LTERQ 49

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 50  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 109

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   +  + +P+++++          +I  S
Sbjct: 110 IPSYRCKPRDIITARDEQNSRALIQNSLDSSPHKKLPKHLTLQPFQYKGLVNQIIDS 166


>gi|51458099|gb|AAU03401.1| ribosomal protein small subunit 4 [Asplenium lunulatum]
          Length = 189

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 22  QSISKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     + L    
Sbjct: 81  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LGDKS 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 FVRDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 187


>gi|184127995|gb|ACC67897.1| ribosomal protein small subunit 4 [Marattia salicifolia]
          Length = 159

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 8/161 (4%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD I++R    PTI
Sbjct: 1   IRLEAKQRLRFNYG-LTERQLLKHVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSPTI 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYI 168
            AARQ VNHRH+LVN R V+I SYRCK  D+I V+ ++     V +  +   +D +PE++
Sbjct: 60  PAARQLVNHRHILVNNRLVDIPSYRCKPKDIISVRDQTNSQILVKKNLESLNKDQIPEHL 119

Query: 169 SVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++    +       RI +        + +   LVVE+YSR
Sbjct: 120 TLSSLEDNKPQGFVNRIVTRD---SIGLNINELLVVEYYSR 157


>gi|51458201|gb|AAU03447.1| ribosomal protein small subunit 4 [Asplenium cuneatiforme]
          Length = 189

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 22  QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++     PTI AARQ VNHRH+ VN   V+I SYRCK  D I V+ +     ++ +   
Sbjct: 81  VLFHLGMAPTIPAARQLVNHRHISVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRKK-S 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 LVGGKTPDHLTVSLAEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|305672339|gb|ADM63593.1| ribosomal protein S4 [Argophyllum laxum]
          Length = 173

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 6/176 (3%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
             RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++ 
Sbjct: 2   KIRRLGALPGLTNKRP----RAGSALRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I
Sbjct: 57  LKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
            SYRCK  D I  + + K  A +  +   +   ++P ++++          +I +S
Sbjct: 117 PSYRCKPRDTITARNEQKSRALIQNSLDSSPHEELPNHLTLQPFQYKGLVNQIINS 172


>gi|305672195|gb|ADM63521.1| ribosomal protein S4 [Pittosporum undulatum]
          Length = 173

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+
Sbjct: 56  LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +      +  D +P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNYLDSSPHDELPKHLTLHPFQYKGLVNQIIDS 172


>gi|305672281|gb|ADM63564.1| ribosomal protein S4 [Coriandrum sativum]
          Length = 173

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNDRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +  +   + + ++P+++++          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIQNSFDSSSQDEMPKHLTLQPFQYKGLVNQIIDS 172


>gi|18028084|gb|AAL55966.1| ribosomal protein S4 [Jamesonia imbricata]
          Length = 191

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189


>gi|51458144|gb|AAU03421.1| ribosomal protein small subunit 4 [Asplenium formosum]
          Length = 192

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 25  QSTSRKNLQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ ++    ++   S 
Sbjct: 84  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDSITVRNRATSCNALRNKSV 143

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 144 VGDKT-PDHLTVSLSEDDRPTGLVNRV---ANRESINLNINELLVVEYYSR 190


>gi|51458150|gb|AAU03424.1| ribosomal protein small subunit 4 [Asplenium heterochroum]
          Length = 189

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A  +RG T    +  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARGTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ ++    + L    
Sbjct: 81  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRATSCNA-LGNKS 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|289576408|dbj|BAI77778.1| ribosomal protein small subunit 4 [Hymenophyllum tunbrigense]
          Length = 194

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K      +       Q    K S F ++L AKQ+++  YG  +E++   
Sbjct: 1   RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+ VN   V+I S
Sbjct: 58  YVRVARKAKGSTGQILLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188
           YRCK  D+I V+ +    +   E    + R  +P++++ +             I      
Sbjct: 118 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 ESIDLNINELLVVEYYSR 192


>gi|51458105|gb|AAU03404.1| ribosomal protein small subunit 4 [Asplenium aegaeum]
          Length = 192

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 25  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ + S 
Sbjct: 84  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRDKSL 143

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 144 VGDKT-PDHLTVSLLEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 190


>gi|37992585|gb|AAR06471.1| small ribosomal protein 4 [Lindigia debilis]
          Length = 173

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 4   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEILLQLLEMR 62

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D + +K + K    + +
Sbjct: 63  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFVTIKNQRKSENIINK 122

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  ++  +P +++ +         +I   L      + +    VVE+YSR
Sbjct: 123 NMEFYQKYKIPNHLTYSFLEKKGLVNQI---LDRESXGLKINELXVVEYYSR 171


>gi|289576432|dbj|BAI77790.1| ribosomal protein small subunit 4 [Hymenophyllum tunbrigense]
          Length = 195

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K      +       Q    K S F ++L AKQ+++  YG  +E++   
Sbjct: 2   RRLKDLPGLTNKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 58

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+ VN   V+I S
Sbjct: 59  YVRVARKAKGSTGQILLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPS 118

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188
           YRCK  D+I V+ +    +   E    + R  +P++++ +             I      
Sbjct: 119 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESIDLNINELLVVEYYSR 193


>gi|254444170|ref|ZP_05057646.1| S4 domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198258478|gb|EDY82786.1| S4 domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 144

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%)

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  F++A  +RG T    +  LE+RLD+IVY   F  T  AARQFVNH H
Sbjct: 1   MYG-LMEKQFRRTFEQAKATRGVTGTIFLQLLETRLDSIVYDLGFTKTRKAARQFVNHGH 59

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATF 179
           + VNG+ V+I SY+ K GD IEV+  +          +    R+VP++++   D      
Sbjct: 60  ISVNGQKVDIPSYQVKVGDEIEVRNTTSSRQLATRNMEANRLRNVPDWLTRQDDAFRGVV 119

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            R P+  +  P    +   L+VEFYSR
Sbjct: 120 NREPTREELEP---SINEQLIVEFYSR 143


>gi|254995579|emb|CAO82748.1| ribosomal protein S4 [Lycopodium jussiaei]
          Length = 172

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  K K++  YG ++E+      + A +++G T   L+  LE RLD 
Sbjct: 6   STPSKKVSQYCIRLEEKXKLRFXYG-LTEQXLLKYVRIARKAKGSTGQVLLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNH+H+LVN R++N+ SYRCK  D+I  + + +  A + + ++
Sbjct: 65  IIFRLGMAPTIPGARQMVNHKHILVNNRAINVPSYRCKPKDIIATRDRPESRAIIAKNNK 124

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +    +P ++++          +I          + +   LVVE+YSR
Sbjct: 125 FSHTYKIPNHLTLQXLQNKGLVNKIIDR---ESIDLNINELLVVEYYSR 170


>gi|219973390|gb|ACL68581.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973392|gb|ACL68582.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973394|gb|ACL68583.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973396|gb|ACL68584.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973398|gb|ACL68585.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973400|gb|ACL68586.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973402|gb|ACL68587.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973404|gb|ACL68588.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973406|gb|ACL68589.1| ribosomal protein small subunit 4 [Marsilea mutica]
 gi|219973506|gb|ACL68639.1| ribosomal protein small subunit 4 [Marsilea mutica]
          Length = 188

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S F ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQFCVRLEAKQRLRFNYG-VTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPKGVVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|8650430|gb|AAF78207.1| small ribosomal protein 4 [Equisetum bogotense]
          Length = 187

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 8/189 (4%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
                V ++        Q  + K S +G++L AKQ+++  YG ++E++  +  + A  ++
Sbjct: 1   LTNKLVESKKNKVSGSDQSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARGAK 59

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           G T   L+  LE RLD I++R  FVPTI +ARQ +NHRH+LVN R V++ S+ CK  D+I
Sbjct: 60  GSTGQILLQLLEMRLDNILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDII 119

Query: 142 EVKQKSKQLASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQP 197
            +       + + +  +  A+  +PE++++              + +        + +  
Sbjct: 120 TIGAPKTYQSILSKRLESFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|305672191|gb|ADM63519.1| ribosomal protein S4 [Delarbrea harmsii]
          Length = 173

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQPRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+
Sbjct: 56  LLKYVRIAGKAKGSTGRVLLQLLEMRLDNILFRLGMATTIPGARQLVNHRHILVNGGIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +      +  +   +   ++P++++++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRVLIQNSLDSSSHEELPKHLTLHPFQYKGLVNQIIDS 172


>gi|320109000|ref|YP_004184590.1| 30S ribosomal protein S4 [Terriglobus saanensis SP1PR4]
 gi|319927521|gb|ADV84596.1| ribosomal protein S4 [Terriglobus saanensis SP1PR4]
          Length = 206

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 112/210 (53%), Gaps = 11/210 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           MS+R  SK KI R +G  L G  K   +  R+Y PG HGQ RKSKP+ F LQLR KQK+ 
Sbjct: 1   MSER--SKFKIQRALGIELPGLGKPGALEKRNYPPGQHGQARKSKPTEFALQLREKQKLL 58

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            +YG   E+  R +     RS  + +  L+S LE RLD IV+R  F  ++ AARQ V+H 
Sbjct: 59  FHYGLREEQLRRFVRDARRRSTTNWAETLVSLLERRLDNIVFRLGFARSMAAARQLVSHG 118

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHD--NMV 176
           HVLVNGR V+IGS   + GD + +   +     + EAS+ A R  +P Y+       N  
Sbjct: 119 HVLVNGRPVSIGSVVLRLGDAVGLTDYAA--GEMTEASRSAPRLSLPSYLQFPEPSVNHH 176

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + +P S      P       V E+Y++
Sbjct: 177 GVMMSLPGS---EHIPFEFNIRQVAEYYAK 203


>gi|51458087|gb|AAU03396.1| ribosomal protein small subunit 4 [Asplenium hispanicum]
          Length = 186

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD +
Sbjct: 20  STSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDNV 78

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +S    ++   S +
Sbjct: 79  IFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRSTSCNALKNKSLV 138

Query: 160 AERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++  P+++++     D       R+          + +   LVVE+YSR
Sbjct: 139 GDKT-PDHLTISLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 184


>gi|118724419|gb|ABL10783.1| ribosomal protein small subunit 4 [Argyrochosma fendleri]
          Length = 197

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 8/199 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDN---MVATFVRIPSSLK 187
           SYR K  D+I ++ +     +V  E+  L   +VP++++++             +     
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKGESLGLGRDEVPDHLTLSISKTSEPTGLVNHM---AN 176

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 177 RESVNLDINELLVVEYYSR 195


>gi|78102709|gb|ABB21568.1| small ribosomal protein 4 [Plagiochila pleurata]
          Length = 165

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGILPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQL 165


>gi|108861120|gb|ABG21432.1| ribosomal protein small subunit 4 [Marsilea villifolia]
          Length = 191

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 10/194 (5%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           +L G      N R        Q    K S + ++L AKQ+++  YG ++E++     + A
Sbjct: 1   SLPGLTGKAPNPRESRV-AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+ 
Sbjct: 59  RKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYP 192
            D+I V+ +      +      + R  ++P+++S   +  +       ++    K     
Sbjct: 119 QDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMD 175

Query: 193 VIMQPNLVVEFYSR 206
           + +   L+VE+YSR
Sbjct: 176 LNINELLIVEYYSR 189


>gi|78102663|gb|ABB21545.1| small ribosomal protein 4 [Plagiochila fusca]
          Length = 176

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 5/180 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRSARRAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K K K  + V +     ++  +P +++ +   +  +  ++ +  
Sbjct: 117 VDIPSYNCEPGDIIAIKNKEKSRSIVTKNINSFQKFKIPSHLTFDSTELRGSVNQMINRE 176


>gi|51458089|gb|AAU03397.1| ribosomal protein small subunit 4 [Asplenium bullatum]
          Length = 188

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE R D 
Sbjct: 21  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRXDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 80  VLFRLGMASTISAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRAKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +R  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 VGDRT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 186


>gi|78102701|gb|ABB21564.1| small ribosomal protein 4 [Plagiochila obtusa]
          Length = 176

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 5/165 (3%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A +++G T   L+  LE R D 
Sbjct: 16  STPNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMYIARKTKGSTGQVLLQLLEMRPDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++     PTI  ARQ VNHRH+ +N   V+I SY C+ GD+I +  K K  A V +   
Sbjct: 75  TIFSLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIGNKQKSRAIVTKNIN 134

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
             ++  +P +++ +   +  +  ++ +        + +   LVVE
Sbjct: 135 SFQKLKIPSHLTFDSTQLRGSVNQMINR---EWIDLKINELLVVE 176


>gi|77862525|gb|ABB04535.1| small ribosomal protein 4 [Cyathodium tuberosum]
          Length = 171

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 94/164 (57%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++     + A ++ G T   L+  LE RLD I++R 
Sbjct: 10  KISQYRIRLEEKQKLRFHYG-LTERQSLKYVRIARKAEGSTGQVLLQLLEMRLDNIIFRL 68

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAER 162
              PTI +ARQ VNHRH+L+N  +++I SY CK  D+I +K + +  + V +  + L E+
Sbjct: 69  GVAPTIPSARQLVNHRHILINNNTISIPSYNCKSRDIITIKNRPQSQSIVKKNLKFLQEQ 128

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ +  ++     +I          + +   LVVE+YSR
Sbjct: 129 KIPNHLNFDLIHLKGLVHQIIDR---EWISLKINELLVVEYYSR 169


>gi|289576418|dbj|BAI77783.1| ribosomal protein small subunit 4 [Hymenophyllum lyallii]
 gi|289576422|dbj|BAI77785.1| ribosomal protein small subunit 4 [Hymenophyllum rufescens]
          Length = 189

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   LPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194
           D+I V+ +    +   E  + + R  +P++++ +             I          + 
Sbjct: 119 DLITVRNRPSSYSGSKENIEFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|99639933|emb|CAJ45125.1| putative ribosomal protein S4 gene [Alsophila ramispina]
          Length = 199

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 20/208 (9%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHG----QRRKSKPSYFGLQLRAKQKMKKYYG 63
           + K+ RR+        K+        PG       Q    K S F ++L AKQ+++  YG
Sbjct: 1   RLKVIRRLKNLPGLTGKTSN------PGETRIATDQSASRKISQFCVRLEAKQRLRFNYG 54

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LV
Sbjct: 55  -LTERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILV 112

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVAT 178
           N R V++ SYRCK  D+I V+ +      +      + R   +P+++S      +     
Sbjct: 113 NDRIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLSFSLLEGNRPKGL 172

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             RI          + +   LVVE+YSR
Sbjct: 173 VNRI---ANRESIDLNINELLVVEYYSR 197


>gi|99639912|emb|CAJ45123.1| putative ribosomal protein S4 gene [Alsophila colensoi]
 gi|99639923|emb|CAJ45124.1| putative ribosomal protein S4 gene [Alsophila foersteri]
          Length = 199

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 8   KHKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFV 180
           R V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       
Sbjct: 115 RIVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVN 174

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           RI          + +   LVVE+YSR
Sbjct: 175 RI---ANRESIDLNINELLVVEYYSR 197


>gi|18027962|gb|AAL55905.1| ribosomal protein S4 [Eriosorus myriophyllus]
 gi|18027964|gb|AAL55906.1| ribosomal protein S4 [Eriosorus myriophyllus]
          Length = 191

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQK++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++++     +V +   
Sbjct: 83  IIFRLGMASTIPAARQLVNHRHILVNECVVDIPSYRCKPKDIITIRKRP-IFHNVAKNES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++       V     +          + +   LVVE+YSR
Sbjct: 142 IGRAGLPDHLTISFSKAGDPVGLVNHM---ASRESVDLEINELLVVEYYSR 189


>gi|51458205|gb|AAU03449.1| ribosomal protein small subunit 4 [Asplenium polyodon]
          Length = 189

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 22  QSTSRKTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++     PTI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ +   
Sbjct: 81  VLFHLGMAPTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRKK-S 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 LVGGKTPDHLTVSLAEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|305672301|gb|ADM63574.1| ribosomal protein S4 [Berzelia lanuginosa]
          Length = 173

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +      +   ++P+++ ++         +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIRNYLDSSPHEELPKHLILHPFQYKGLVNQIIDS 172


>gi|18027958|gb|AAL55903.1| ribosomal protein S4 [Pterozonium reniforme]
 gi|18027960|gb|AAL55904.1| ribosomal protein S4 [Pterozonium reniforme]
          Length = 191

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 2/189 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K   +          Q    K S F ++L  KQK++  YG ++E++     + A
Sbjct: 3   LPGLTGKDKTSNSGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            ++RG T   L+  LE RLD I++R     TI AARQ VNHRH+LVN   V+I SYRCK 
Sbjct: 62  RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKP 121

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
            D+I ++ +     +  +   +    +P++++++          +          + +  
Sbjct: 122 KDIITIRNRPIFHNAAKD-ESIGRDGIPDHLTLSFSKAGEQVGLVNHIASRESVDLDINE 180

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 181 LLVVEYYSR 189


>gi|78102689|gb|ABB21558.1| small ribosomal protein 4 [Plagiochila maderensis]
          Length = 173

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RIKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+ FLE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQFLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ N   +  +  ++ 
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKIPSHLTFNSTQLQGSVNQMI 173


>gi|51458092|gb|AAU03398.1| ribosomal protein small subunit 4 [Asplenium aureum]
          Length = 185

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 19  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 78  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALKNKSL 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V+            R+          + +   LVVE+YSR
Sbjct: 138 VGDKT-PDHLTVSLSEGNRPTGLVNRV---ANRESINLNINELLVVEYYSR 184


>gi|74273115|gb|ABA01257.1| ribosomal protein S4 [Passiflora coriacea]
          Length = 201

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 16/175 (9%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           + S +  +L+ KQ+++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 29  RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    + ++       
Sbjct: 88  GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSLDMI 147

Query: 158 ------QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +P ++ +          +I          + +   LV+E+YSR
Sbjct: 148 KKSLDDSSPRKKLPTHLILYRKEYKGLVNQIIDRK---WVGLKINELLVIEYYSR 199


>gi|78102655|gb|ABB21541.1| small ribosomal protein 4 [Plagiochila fasciculata]
          Length = 172

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 5/176 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRI 182
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +  +  ++
Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNMNSFQKLKIPSHLTFDSTQLQGSVNQM 172


>gi|99640050|emb|CAJ45147.1| putative ribosomal protein S4 gene [Sphaeropteris medullaris]
          Length = 198

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 16/205 (7%)

Query: 9   HKIDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            K+ RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG ++
Sbjct: 1   LKVIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E+  R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R
Sbjct: 56  ERLLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDR 114

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVR 181
            V++ SYRCK  D+I V+ +      +      + R  ++P++++      +       R
Sbjct: 115 IVDVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVNR 174

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I          + +   LVVE+YSR
Sbjct: 175 I---ANRESIALNINELLVVEYYSR 196


>gi|17154622|emb|CAC83923.1| ribosomal protein S4 [Herbertia pulchella]
          Length = 181

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 9/189 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K  RR+G       + P + R     L  Q R  K S   ++L  +QK++ +YG ++E+
Sbjct: 1   CKKIRRLGALQELTTRRPTSGR----DLKNQLRSGKRSQXRIRLEEQQKLRFHYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +       A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V
Sbjct: 56  QLLKYVHIAGKAKGSTGQVLLQILEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIV 115

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLK 187
           +I SYRCK  D+I  K K +  A +     L+ + ++P +++++         +I  S  
Sbjct: 116 DIPSYRCKPRDIITTKDKQRSKALIQNYIDLSPQEELPNHLTMDPFQYKGLVNQIIDSK- 174

Query: 188 DVPYPVIMQ 196
                + + 
Sbjct: 175 --WIGLKIN 181


>gi|219973328|gb|ACL68550.1| ribosomal protein small subunit 4 [Marsilea deflexa]
          Length = 188

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S F ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAVD----QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSVLEGNKPKGVVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|219973320|gb|ACL68546.1| ribosomal protein small subunit 4 [Marsilea ancyclopoda]
 gi|219973412|gb|ACL68592.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973414|gb|ACL68593.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973416|gb|ACL68594.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973418|gb|ACL68595.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973420|gb|ACL68596.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973422|gb|ACL68597.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973424|gb|ACL68598.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973426|gb|ACL68599.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973436|gb|ACL68604.1| ribosomal protein small subunit 4 [Marsilea vestita]
          Length = 188

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSNNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|107770425|gb|ABF83754.1| small ribosomal protein 4 [Amentotaxus argotaenia]
 gi|107770427|gb|ABF83755.1| small ribosomal protein 4 [Amentotaxus yunnanensis]
          Length = 195

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 11/197 (5%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P   R    G     +  KPS + + L+ KQ+++  YG ++E++    
Sbjct: 2   RLKTLPGLSKKTP--NRIEQSGNKKHSKPPKPSKYPVCLKEKQRLRFNYG-LTERQLLQY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SY
Sbjct: 59  VRIARRANGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKD 188
           RCK  D+I +K + +    + +   L++RD   VP ++++       +    +I  S + 
Sbjct: 119 RCKPQDLISIKDQQRSRNIINKNIDLSQRDKIWVPNHLNLLKKKSQYIGLVKKIIDSKR- 177

Query: 189 VPYPVIMQPNLVVEFYS 205
               + +   LVVE+YS
Sbjct: 178 --ISLKINELLVVEYYS 192


>gi|52788821|gb|AAU87383.1| ribosomal protein small subunit 4 [Todea barbara]
          Length = 188

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 9/191 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     +N +     +  Q    K S + ++L AKQ+++  YG  +E++     + A +
Sbjct: 1   PGLTNKTLNPKKARIAI-DQSASKKISQYCIRLEAKQRLRFNYGS-TERQLLRYVRIARK 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD IV      PTI AARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNIVPELGMAPTIPAARQSVNHRHILVNDHIVDIPSYRCKPRD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIM 195
           +   + ++     + +  + ++ + +P++++++            RI +        + +
Sbjct: 119 ITTARDRTSSYDRITKEIESSQGEKIPDHLTLSLSGGNRPKGLVNRIVNRD---SIGLNI 175

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 176 NELLVVEYYSR 186


>gi|51458140|gb|AAU03419.1| ribosomal protein small subunit 4 [Asplenium trichomanes subsp.
           quadrivalens]
          Length = 184

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 17  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 76  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 135

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+    K     + +   LVVE+YSR
Sbjct: 136 VGDKT-PDHLTVSLSEGDRPTGLVNRV---AKRESINLNINELLVVEYYSR 182


>gi|51458097|gb|AAU03400.1| ribosomal protein small subunit 4 [Asplenium erectum]
          Length = 181

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 14  QSTSKKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     + L    
Sbjct: 73  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LGDKS 131

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 P++++V     D       R+          + +   LVVE+YSR
Sbjct: 132 FVRDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLDINELLVVEYYSR 179


>gi|289576406|dbj|BAI77777.1| ribosomal protein small subunit 4 [Hymenophyllum dentatum]
          Length = 194

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+ +      K      +       Q    K S F ++L AKQ+++  YG  +E++   
Sbjct: 1   RRLKDLPGLTIKKLNVREARI--ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLK 57

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I S
Sbjct: 58  YVRVARKAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPS 117

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKD 188
           YRCK  D+I V+ +    +   E    + R  +P++++ +             I      
Sbjct: 118 YRCKPKDLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSENNIPKGLVNGI---ANR 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 ESIDLNINELLVVEYYSR 192


>gi|17154609|emb|CAC83916.1| ribosomal protein S4 [Ennealophus euryandrus]
          Length = 176

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 9/184 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGALPGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKY 55

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
              A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 56  VHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 115

Query: 134 RCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           RCK  D+I  K K +    +          ++P +++++         +I  S       
Sbjct: 116 RCKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK---WIG 172

Query: 193 VIMQ 196
           + + 
Sbjct: 173 LKIN 176


>gi|52788794|gb|AAU87377.1| ribosomal protein small subunit 4 [Coniogramme fraxinea]
 gi|99640377|emb|CAJ45119.1| putative ribosomal protein S4 gene [Coniogramme fraxinea]
          Length = 199

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 2/199 (1%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K   +          Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKLMRRLKNLPGLAGKDGTSNLGDFRIAGDQSASKKISQFCVRLEAKQRLRFNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A ++RG T    +  LE RLD I+++     TI AARQ VNHRH+LVN R 
Sbjct: 60  RQLLKYVRIARKTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNHRV 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           V+I SYR K  D++ ++ +     +   +  L    +P+++ ++          +     
Sbjct: 120 VDIPSYRRKPRDILTIRSRPTSRNAAK-SEYLGGNKIPDHLILSLPKTGEPVGLVNHMAN 178

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 179 RESVDLNINELLVVEYYSR 197


>gi|18028046|gb|AAL55947.1| ribosomal protein S4 [Jamesonia alstonii]
 gi|18028068|gb|AAL55958.1| ribosomal protein S4 [Jamesonia imbricata]
          Length = 190

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 23  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 82  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 188


>gi|170516217|gb|ACB15110.1| small ribosomal protein 4 [Libocedrus sp. QBW-2007]
          Length = 200

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI   +        K+P   R   P      +  KPS + ++L+ KQ+++ +YG + E
Sbjct: 1   RLKIISCLKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 58  RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRI 182
           V+I SYRCK  D+I +K+K      + +   + ++D   VP +++             +I
Sbjct: 118 VDIPSYRCKPQDLISIKEKQGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGVVKKI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             + +     + +   LVVE+YSR
Sbjct: 178 IDNKR---IGLKINELLVVEYYSR 198


>gi|74273149|gb|ABA01274.1| ribosomal protein S4 [Passiflora xiikzodz]
          Length = 201

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 16/175 (9%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           + S +  +L+ KQ+++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 29  RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    + ++       
Sbjct: 88  GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKNEQKSKDMIKKSLDSLDMI 147

Query: 158 ------QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +P ++ +          +I          + +   LV+E+YSR
Sbjct: 148 KKSLDDSSPRKKLPTHLILYRKEYKGLVNQIIDRK---WVGLKINELLVIEYYSR 199


>gi|118175399|gb|ABK76262.1| ribosomal protein S4 [Adiantum aleuticum]
          Length = 195

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        KS  +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKSNASNLGEFRVAGDQSTSRKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             + +    
Sbjct: 120 SYRRKPRDIITIRNRPTSCNAAK-GESLGRDEVPDHLTLSLSKTGEPTGLVNHMVNR--- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|311901200|gb|ADQ13150.1| small ribosomal protein 4 [Nephrolepis pectinata]
          Length = 177

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 10  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK GD+I V+ +     ++     
Sbjct: 69  VIFHLGMTSTIPAARQLVNHRHILVNNCIVDIPSYRCKPGDIITVRNRPTSYNALRAEFS 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 VGDKT-PDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 175


>gi|18028048|gb|AAL55948.1| ribosomal protein S4 [Jamesonia alstonii]
 gi|18028076|gb|AAL55962.1| ribosomal protein S4 [Jamesonia laxa]
          Length = 191

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189


>gi|118175403|gb|ABK76264.1| ribosomal protein S4 [Adiantum pedatum]
          Length = 195

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        KS  +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKSNASNLGEFRVAGDQSASRKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             + +    
Sbjct: 120 SYRRKPRDIITIRNRPTSCNAAK-GESLGRDEVPDHLTLSLSKTGEPTGLVNHMVNR--- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|39939072|ref|NP_950838.1| 30S ribosomal protein S4 [Onion yellows phytoplasma OY-M]
 gi|39722181|dbj|BAD04671.1| ribosomal protein S4 and related protein [Onion yellows phytoplasma
           OY-M]
          Length = 149

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/155 (38%), Positives = 92/155 (59%), Gaps = 6/155 (3%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           ++ KQK++  YG +SEK+FR  F  A + +G      +  LESRLD +VYR  F  T   
Sbjct: 1   MQEKQKLRFTYG-VSEKQFRKTFDNASKLKGIHGEMFLVLLESRLDNVVYRLGFAKTRAQ 59

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN 171
           ARQ  NH H+LV+G+ V+I SYR K G  + +++KSK L  V EA   ++    +Y+S++
Sbjct: 60  ARQLANHGHILVDGKKVDIASYRLKPGQTVTLREKSKNLNIVQEAVN-SKFVRADYVSLD 118

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + +V  +VR P   + +P    +   L+VE+Y+R
Sbjct: 119 KE-LVGKYVRYPQRNEFLP---DINEQLIVEYYNR 149


>gi|320455032|dbj|BAJ65663.1| small ribosomal protein 4 [Metzgeria decipiens]
          Length = 185

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RTKIIRRLGALPGLTSKTFKSKSSY---IDRPAPNKKISQYRVRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++R   VPTI AARQ VNH H+ +N   
Sbjct: 57  RQLLKYVRIARKTKGSTGLLLLQLLEMRLDNIIFRLGMVPTIPAARQLVNHGHISINKDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
           V+I SY C+ GD+I +K + +  + ++E     ++  +P +++ +   ++ +  R+ +  
Sbjct: 117 VDIPSYNCELGDIITIKNQERYRSIIMERLNSIQKQGIPNHLAFDSTKIIGSVNRVINR- 175

Query: 187 KDVPYPVIMQPN 198
                 + +   
Sbjct: 176 --ECIDLKINEL 185


>gi|29422379|gb|AAO84585.1| small ribosomal protein 4 [Philonotis thwaitesii]
          Length = 153

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 5/155 (3%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             KQK   +YG I+E++  +  + A + +G T   L+  LE RLD +++R    PTI  A
Sbjct: 1   EKKQKSXCHYG-ITERQLLNYVRIARKVKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGA 59

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171
           RQ VNHRH+LVN R V+I SYRCK  D I +K + K  A + +     ++  +P +++ N
Sbjct: 60  RQLVNHRHILVNDRLVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKIPNHLTYN 119

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I   L      + +   LVVE+YSR
Sbjct: 120 SLENKGLVNQI---LDRESIGLKINELLVVEYYSR 151


>gi|32401812|gb|AAP80894.1| small ribosomal protein 4 [Saxifraga stolonifera]
          Length = 184

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 9/184 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     + A
Sbjct: 1   LPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIA 55

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I++R     TI  ARQ VNHRHVLVNGR V+I SYRCK 
Sbjct: 56  GKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHVLVNGRIVDIPSYRCKS 115

Query: 138 GDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            DVI  K + K    +  +   +   +VP+Y++++         +I  +       + + 
Sbjct: 116 RDVITAKDEQKSRTLIQNSLDSSPHEEVPKYLTLHPLQYKGLVNQIIDNK---WVGLKIN 172

Query: 197 PNLV 200
             LV
Sbjct: 173 ELLV 176


>gi|157689582|gb|ABV65347.1| ribosomal protein S4 [Viviania marifolia]
          Length = 188

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 15/177 (8%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           R+ K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  +E RLD  +
Sbjct: 14  RREKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGKAKGATGQVLLQLIEMRLDNTL 72

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-- 158
           +R     TI  ARQ VNHRH+LVNG +V+I SYRCK  D+I V+ + K  A +       
Sbjct: 73  FRLGMAFTIPQARQLVNHRHILVNGHTVDIPSYRCKPRDIITVRDEEKSKALIQNCIDSR 132

Query: 159 ---------LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    L +R +P +++            I          + ++   VVE+YSR
Sbjct: 133 NRKEFPKGVLPKRKLPNHLTFELSQYKGFVEEIVDRD---GIGLKIKELRVVEYYSR 186


>gi|18027950|gb|AAL55899.1| ribosomal protein S4 [Taenitis interrupta]
          Length = 190

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 18  NLWGRPKSPVNTRSYGPGL----HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           NL G        ++  PG       Q    K S F ++L  KQK++  YG ++E++    
Sbjct: 2   NLPGLTGKD---KTSNPGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD I++R     TI AARQ VNHRH+LVN   V+I SY
Sbjct: 58  VRIARKTKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNKCIVDIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           RCK  D+I ++   + +   +   +     +P++++++          +          +
Sbjct: 118 RCKPKDIITIR--KRPIFHTVAKDEFIRDGIPDHLTLSFSKAGEQVGLVNHMASRESVDL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVEFYSR
Sbjct: 176 EINELLVVEFYSR 188


>gi|117306730|emb|CAH73333.1| ribosomal protein S4 [Tetraphidopsis pusilla]
          Length = 179

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 9/186 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G     +  +S            K   + ++L  KQK++ +YG I+E++  +  + A ++
Sbjct: 1   GLTNKILQVKSSSINQ--STSNKKIXQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKT 57

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 58  KGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNDHIVNIPSYRCKPQDF 117

Query: 141 IEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
           I V+ K K  A         +  +P +++ +         +I   L      + +   LV
Sbjct: 118 IIVENKQKSEA---ATDFSKKYKIPNHLTYSFLEKKGLVNKI---LDRESIGLKINELLV 171

Query: 201 VEFYSR 206
           VE+YSR
Sbjct: 172 VEYYSR 177


>gi|311901202|gb|ADQ13151.1| small ribosomal protein 4 [Nephrolepis pendula]
          Length = 178

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK GD+I V+ +     ++     
Sbjct: 70  VIFHLGMTSTIPAARQLVNHRHILVNNCIVDIPSYRCKPGDIITVRNRPTSYNALRAEFS 129

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P+++++     +        I          + +   LVVE+YSR
Sbjct: 130 VGDKT-PDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|51458190|gb|AAU03442.1| ribosomal protein small subunit 4 [Asplenium theciferum]
          Length = 195

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 28  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 86

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++ + S 
Sbjct: 87  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRKKSL 146

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++      D       RI          + +   LVVE+YSR
Sbjct: 147 VGDKT-PDHLTFALSEGDRPTGLVNRI---ANRESINLNINELLVVEYYSR 193


>gi|52788810|gb|AAU87379.1| ribosomal protein small subunit 4 [Monachosorum henryi]
          Length = 197

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 10/202 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+     +       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKLIRRLKNLPGLTGKTSNLGETRV--ATDQSASRKISQFCVRLEAKQRLRLNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A ++RG T   L+  LE RLD +++      TI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTRGSTGQVLLQLLEMRLDNVIFHLGMASTIPAARQLVNHRHILVNYRV 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPS 184
           V+I SYR K  D+I  + +     ++ + S + ++ +P++++++            RI  
Sbjct: 118 VDIPSYRRKPKDIITARNRPTSYNALRDQSLVGDK-IPDHLTLSLSEGNRPTGLANRI-- 174

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 175 -ANRESVNLNINELLVVEYYSR 195


>gi|219973330|gb|ACL68551.1| ribosomal protein small subunit 4 [Marsilea fournieri]
 gi|219973338|gb|ACL68555.1| ribosomal protein small subunit 4 [Marsilea macropoda]
 gi|219973340|gb|ACL68556.1| ribosomal protein small subunit 4 [Marsilea macropoda]
 gi|219973342|gb|ACL68557.1| ribosomal protein small subunit 4 [Marsilea macropoda]
 gi|219973346|gb|ACL68559.1| ribosomal protein small subunit 4 [Marsilea macropoda]
 gi|219973348|gb|ACL68560.1| ribosomal protein small subunit 4 [Marsilea macropoda]
 gi|219973350|gb|ACL68561.1| ribosomal protein small subunit 4 [Marsilea macropoda]
 gi|219973374|gb|ACL68573.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|219973382|gb|ACL68577.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|219973386|gb|ACL68579.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|219973388|gb|ACL68580.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|219973438|gb|ACL68605.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973440|gb|ACL68606.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973442|gb|ACL68607.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973444|gb|ACL68608.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973446|gb|ACL68609.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973448|gb|ACL68610.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973450|gb|ACL68611.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973454|gb|ACL68613.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973460|gb|ACL68616.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973466|gb|ACL68619.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973476|gb|ACL68624.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|219973480|gb|ACL68626.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|219973484|gb|ACL68628.1| ribosomal protein small subunit 4 [Marsilea vestita]
          Length = 188

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|16565391|gb|AAL26210.1|AF313610_1 small ribosomal protein 4 [Gnetum ula]
          Length = 193

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 10/198 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K P   +         R   K S     L+ KQK++ ++G ++E++ R
Sbjct: 1   IRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTERQLR 56

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN   VNI 
Sbjct: 57  QYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVVNIP 116

Query: 132 SYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           SY+CK  DVI +K K       +     ++  E  +P +++++         +I      
Sbjct: 117 SYQCKPQDVITIKGKKIDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKIIDRKD- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + ++  LV+E+YSR
Sbjct: 176 --IQLNIKEMLVIEYYSR 191


>gi|86438890|emb|CAJ55421.1| small ribosomal protein 4 [Plagiochila equitans]
          Length = 172

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 90/174 (51%), Gaps = 5/174 (2%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E++    
Sbjct: 1   RLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I SY
Sbjct: 57  MRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSL 186
            C+ GD+I ++ K K  +++ +      +  +P +++ +   +  +  ++ +  
Sbjct: 117 NCEPGDIITIRNKQKSQSAITKNINSFXKLKIPSHLTFDSTQLRGSVNQMINRE 170


>gi|219973452|gb|ACL68612.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973458|gb|ACL68615.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973464|gb|ACL68618.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973468|gb|ACL68620.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973470|gb|ACL68621.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973472|gb|ACL68622.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973474|gb|ACL68623.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973478|gb|ACL68625.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973488|gb|ACL68630.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973490|gb|ACL68631.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973492|gb|ACL68632.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973494|gb|ACL68633.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973496|gb|ACL68634.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973498|gb|ACL68635.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973500|gb|ACL68636.1| ribosomal protein small subunit 4 [Marsilea vestita]
          Length = 188

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I ++ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|18028040|gb|AAL55944.1| ribosomal protein S4 [Jamesonia pulchra]
          Length = 188

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 21  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 80  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 139 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 186


>gi|118175401|gb|ABK76263.1| ribosomal protein S4 [Adiantum pedatum]
          Length = 195

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        KS  +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKSNASNLGEFRVAGDQSALRKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             + +    
Sbjct: 120 SYRRKPRDIITIRNRPTSCNAAK-GESLGRDEVPDHLTLSLSKTGEPTGLVNHMVNR--- 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|18027956|gb|AAL55902.1| ribosomal protein S4 [Pterozonium cyclosorum]
          Length = 191

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 2/168 (1%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQK++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     +V +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKPKDIITIRNRP-IFHNVSKDES 141

Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++          +          + +   LVVE+YSR
Sbjct: 142 IGRDGIPDHLTLSFSKAGERVGLVNHMASRESVDLDINELLVVEYYSR 189


>gi|27452500|gb|AAO15278.1| ribosomal protein S4 [Afropteris barklyae]
          Length = 191

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRCK  D+I ++ +     +   A  
Sbjct: 83  IIFRLGMSSTIPAARQLVNHRHILVNQRIVDIPSYRCKPRDIITIRNRPTSHNAAK-AES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P++++++             +          + +   LVVE+YSR
Sbjct: 142 PGGGGIPDHLTLSLSKTGEPAGLVNHM---ANRESVDLDINELLVVEYYSR 189


>gi|51458101|gb|AAU03402.1| ribosomal protein small subunit 4 [Asplenium fragile]
          Length = 181

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 14  QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ + S 
Sbjct: 73  VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGDKSF 132

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 133 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 179


>gi|305672313|gb|ADM63580.1| ribosomal protein S4 [Eremosyne pectinata]
          Length = 171

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 6/176 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTKKRP----RVGSDLRNQLRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD  ++R     TI  ARQ +NHRH+LVN R V+
Sbjct: 56  LLKYVRIAGKAKGSTGRVLLQLLEMRLDNTLFRLGMATTIPGARQLINHRHILVNDRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPS 184
           I SYRCK  D I  + + K  A +  +       ++P +++++         +I  
Sbjct: 116 IPSYRCKPRDTITGRGEQKSRALIQNSLDSFPNEELPNHLTLHPLEYKGLVNQIID 171


>gi|305672293|gb|ADM63570.1| ribosomal protein S4 [Grisollea myrianthea]
          Length = 173

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTTKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN R V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNSRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K  A +  + + +   + P++++++         +I  +
Sbjct: 116 IPSYRCKPRDIITARDEQKSRALIQNSLESSPHEESPKHLTLHPFQSKGFVNQIIDN 172


>gi|289576402|dbj|BAI77775.1| ribosomal protein small subunit 4 [Hymenophyllum peltatum]
 gi|289576410|dbj|BAI77779.1| ribosomal protein small subunit 4 [Hymenophyllum peltatum]
          Length = 189

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   LPGLTNKKLNLREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194
           D+I V+ +    +   E    + R  +P++++ +             I          + 
Sbjct: 119 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|165979148|gb|ABY77017.1| ribosomal protein small subunit 4 [Asplenium fontanum subsp.
           fontanum]
          Length = 188

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNYIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 186


>gi|18027954|gb|AAL55901.1| ribosomal protein S4 [Austrogramme decipiens]
          Length = 191

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K   +          Q    K S F ++L  KQK++  YG ++E++     + A
Sbjct: 3   LPGLTGKDKTSNSGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            ++RG T   L+  LE RLD I++R     TI AARQ VNHRH+LVN   V+I SYRCK 
Sbjct: 62  RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKP 121

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
            D+I ++++     +  +   +    +P++++ +          + +        + +  
Sbjct: 122 KDIITIRKRPIFHTAAKD-EFIGRAGIPDHLTFSFSKAGEQVGLVNNMANRESVDLEINE 180

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 181 LLVVEYYSR 189


>gi|17154473|emb|CAC83795.1| ribosomal protein S4 [Chasmanthe aethiopica]
          Length = 176

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 10/184 (5%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  HIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLE--ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           CK  D+I  K K +  A +    AS   + ++P +++++         +I  S       
Sbjct: 116 CKPRDIITTKNKQRSKALIQNLIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK---WIG 172

Query: 193 VIMQ 196
           + + 
Sbjct: 173 LKIN 176


>gi|66866236|gb|AAY57787.1| small ribosomal protein 4 [Pyrrhobryum paramattense]
          Length = 206

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 10/177 (5%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 32  INQSTSNRKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 90

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K    +  
Sbjct: 91  LDNIIFRLGMTPTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDREKYQTIIXX 150

Query: 156 ASQLAERD------VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  D      +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 151 XXXXKNIDFYQKYKIPNHLTYNFLEKKGVVNQI---LDRESISLKINELLVVEYYSR 204


>gi|219973482|gb|ACL68627.1| ribosomal protein small subunit 4 [Marsilea mollis]
          Length = 188

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLKYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|16565387|gb|AAL26208.1|AF313608_1 small ribosomal protein 4 [Marsilea mutica]
          Length = 188

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S F ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|310707171|gb|ADP08971.1| Rps4 [Saccoloma inaequale]
          Length = 189

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A +++G T    +  LE RLD 
Sbjct: 22  QSGSKKISQFCVRLEAKQRLRFSYG-LTERQPLNYVRIARKTKGSTGQVSLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN R V+I SYRC+  D+I V+ +    ++VL  + 
Sbjct: 81  VIFHPGVASTIPAARQLVNHRHILVNNRIVDIPSYRCEPKDIITVRNRPTS-SNVLRNAS 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P+++++             RI          + +   LVVE+YSR
Sbjct: 140 FGRDKIPDHLTLSLTEGSRPTGLVNRI---ANRESVDLNINELLVVEYYSR 187


>gi|301353380|ref|YP_003795582.1| ribosomal protein S4 [Pteridium aquilinum subsp. aquilinum]
 gi|301016298|gb|ADK47585.1| ribosomal protein S4 [Pteridium aquilinum subsp. aquilinum]
          Length = 195

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        +   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRFNYG-LTERQPL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T   L   LE RLD +++      TI AARQ VNHRH+LVN   V+I 
Sbjct: 60  KYVRIARKTRGSTGQVLPQLLEMRLDNVIFHLGMASTIPAARQLVNHRHILVNNHVVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKD 188
           SYRCK  D+I V+ +     ++   S L E+ +P+++++             RI      
Sbjct: 120 SYRCKPKDIITVRNRPTSYNALKGESLLGEK-IPDHLTLSLSEGSKPTGLVNRI---ASR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLNINELLVVEYYSR 193


>gi|18028082|gb|AAL55965.1| ribosomal protein S4 [Jamesonia brasiliensis]
          Length = 187

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 20  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 79  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 138 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 185


>gi|18028034|gb|AAL55941.1| ribosomal protein S4 [Jamesonia canescens]
 gi|18028036|gb|AAL55942.1| ribosomal protein S4 [Jamesonia canescens]
 gi|18028038|gb|AAL55943.1| ribosomal protein S4 [Jamesonia canescens]
 gi|18028044|gb|AAL55946.1| ribosomal protein S4 [Jamesonia alstonii]
 gi|18028050|gb|AAL55949.1| ribosomal protein S4 [Jamesonia rotundifolia]
 gi|18028052|gb|AAL55950.1| ribosomal protein S4 [Jamesonia rotundifolia]
 gi|18028054|gb|AAL55951.1| ribosomal protein S4 [Jamesonia rotundifolia]
 gi|18028060|gb|AAL55954.1| ribosomal protein S4 [Jamesonia imbricata]
 gi|18028062|gb|AAL55955.1| ribosomal protein S4 [Jamesonia imbricata]
 gi|18028066|gb|AAL55957.1| ribosomal protein S4 [Jamesonia imbricata]
 gi|18028074|gb|AAL55961.1| ribosomal protein S4 [Jamesonia imbricata]
 gi|18028080|gb|AAL55964.1| ribosomal protein S4 [Jamesonia imbricata]
          Length = 191

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189


>gi|157689512|gb|ABV65312.1| ribosomal protein S4 [Leonia glycycarpa]
          Length = 144

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 4/143 (2%)

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN
Sbjct: 3   ITERQLLTYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVN 62

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIP 183
           GR V+I SYRCK  D+I  K K K  A +      L + ++P+++++N         +I 
Sbjct: 63  GRIVDIPSYRCKPRDIITAKDKKKSRAMIPNYLDSLPQEELPKHLTLNPFQCKGLVNQII 122

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            S       + +   LVVE+YSR
Sbjct: 123 DSK---WVDLKINELLVVEYYSR 142


>gi|51458155|gb|AAU03426.1| ribosomal protein small subunit 4 [Asplenium varians]
          Length = 190

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     + L    
Sbjct: 82  VLFHLGIASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LGNKS 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++V     D       R+          + +   LVVE+YSR
Sbjct: 141 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 188


>gi|219973322|gb|ACL68547.1| ribosomal protein small subunit 4 [Marsilea hirsuta]
 gi|219973332|gb|ACL68552.1| ribosomal protein small subunit 4 [Marsilea hirsuta]
 gi|219973334|gb|ACL68553.1| ribosomal protein small subunit 4 [Marsilea hirsuta]
 gi|219973408|gb|ACL68590.1| ribosomal protein small subunit 4 [Marsilea hirsuta]
          Length = 188

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|78102667|gb|ABB21547.1| small ribosomal protein 4 [Plagiochila gregaria]
          Length = 165

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           V+I SY C+ GD+I +K K K  +++ +     ++  +P +++ +   +
Sbjct: 117 VDISSYNCEPGDIITIKNKQKSQSAITKNINSFQKLKIPSHLTFDSTQL 165


>gi|51458080|gb|AAU03393.1| ribosomal protein small subunit 4 [Asplenium cuspidatum]
          Length = 189

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG +SE++     + A ++RG T    +  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQRLRFNYG-LSERQLLRYVRIARKTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN   V+I SYRC   D+I V+ +     + L+   
Sbjct: 81  VLFQLGMASTIPAARQLVNHRHILVNNWIVDIPSYRCSPKDIITVRNRPTSCNA-LKNRS 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 FVGYKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|219973462|gb|ACL68617.1| ribosomal protein small subunit 4 [Marsilea deflexa]
          Length = 188

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSTSKKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--A 156
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D+I V+ +      +     
Sbjct: 77  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 136

Query: 157 SQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 137 ESSRSNEIPDHLSLSVLEGNKPKGVVNQV---AKRESMDLNINELLIVEYYSR 186


>gi|52788785|gb|AAU87373.1| ribosomal protein small subunit 4 [Asplenium scolopendrium]
          Length = 191

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 24  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 83  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 142

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V+            R+          + +   LVVE+YSR
Sbjct: 143 VGDKT-PDHLTVSLSEGNRPTGLVNRV---ANRESINLNINELLVVEYYSR 189


>gi|219973428|gb|ACL68600.1| ribosomal protein small subunit 4 [Marsilea oligospora]
 gi|219973486|gb|ACL68629.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973502|gb|ACL68637.1| ribosomal protein small subunit 4 [Marsilea vestita]
 gi|219973504|gb|ACL68638.1| ribosomal protein small subunit 4 [Marsilea vestita]
          Length = 187

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 1   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 56  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I ++ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 116 DIITIRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 172

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 173 NINELLIVEYYSR 185


>gi|99639971|emb|CAJ45131.1| putative ribosomal protein S4 gene [Cyathea grandifolia]
 gi|99639990|emb|CAJ45135.1| putative ribosomal protein S4 gene [Cyathea divergens]
          Length = 196

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)

Query: 11  IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
           + RR+        K+  P  TR+       Q    K S F ++L AKQ+++  YG ++E+
Sbjct: 1   VIRRLKNLPGLTGKTSNPGETRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
             R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V
Sbjct: 56  LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIV 114

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIP 183
           ++ SYRCK  D+I V+ +      +      + R  ++P++++      +       RI 
Sbjct: 115 DVPSYRCKPKDIITVRDRPTSYNGLRSGINESSRGDEIPDHLTFSLLEGNRPKGLVDRI- 173

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 174 --ANRESIDLNINELLVVEYYSR 194


>gi|219973326|gb|ACL68549.1| ribosomal protein small subunit 4 [Marsilea coromandelina]
 gi|219973456|gb|ACL68614.1| ribosomal protein small subunit 4 [Marsilea vestita]
          Length = 187

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 1   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 56  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 116 DIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDL 172

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 173 NINELLIVEYYSR 185


>gi|305672271|gb|ADM63559.1| ribosomal protein S4 [Gomphandra javanica]
          Length = 173

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN R V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNSRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K  A +  + + +   + P++++++         +I  +
Sbjct: 116 IPSYRCKPQDIITARDEQKSRALIQNSLESSPHEESPKHLTLHPFQSKGFVNQIIDN 172


>gi|17154712|emb|CAC83910.1| ribosomal protein S4 [Tritonia disticha]
          Length = 175

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 10/183 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P++    G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTSKRPIS----GSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K K +  A +      +  + ++P +++++         +I  S       +
Sbjct: 116 KPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQ 196
            + 
Sbjct: 173 KIN 175


>gi|99640360|emb|CAJ45116.1| putative ribosomal protein S4 gene [Azolla pinnata]
 gi|157272409|gb|ABV27019.1| ribosomal protein small subunit 4-like protein [Azolla pinnata]
 gi|157272423|gb|ABV27026.1| ribosomal protein small subunit 4-like protein [Azolla pinnata]
          Length = 203

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 22/211 (10%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHG------QRRKSKPSYFGLQLRAKQKMKKY 61
           + K+ RR+  +L G      N     PG              K S F ++L AKQ+++  
Sbjct: 1   RFKVIRRLK-SLPGLAGEAFN-----PGETWIATDQSTSTPKKISQFCVRLEAKQRLRYN 54

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E++     + A +++G T    +  LE RLD I+Y     PTI AARQ VNHRH+
Sbjct: 55  YG-LTERQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIYHLGMSPTIPAARQPVNHRHI 113

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYIS---VNHDNM 175
           LVN R V++ SYRCK  D+I V+ +   L  V            ++P +++   +  +  
Sbjct: 114 LVNDRIVDVPSYRCKPKDIITVRNRPTSLNGVKRTGNFESSRGNELPNHLTLSLLEDNRP 173

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +  +        + +    VVE+YSR
Sbjct: 174 KGLVNQTATR---ESIDLNINELSVVEYYSR 201


>gi|78102625|gb|ABB21526.1| small ribosomal protein 4 [Plagiochila abietina]
          Length = 175

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 5/179 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKISQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMYIARKTKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           V+I SY C+ GD+I +  K K  A V +     ++  +P +++ +   +  +  ++ + 
Sbjct: 117 VDIPSYNCEPGDIIAIGNKQKSRAIVTKNINSFQKLKIPSHLTFDSTQLRRSVNQMINR 175


>gi|51458123|gb|AAU03411.1| ribosomal protein small subunit 4 [Asplenium hobdyi]
          Length = 191

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 24  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 83  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSI 142

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 143 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 189


>gi|227439283|gb|ACP31318.1| ribosomal protein small subunit 4 [Pteridium arachnoideum]
          Length = 190

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L   LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P+++++             RI          + +   LVVE+YSR
Sbjct: 142 LGEK-IPDHLTLSLSEGSKPTGLVNRI---ASRESVNLNINELLVVEYYSR 188


>gi|117306748|emb|CAH73342.1| ribosomal protein S4 [Acrocladium auriculatum]
          Length = 177

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A +
Sbjct: 1   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARK 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D
Sbjct: 57  AKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K K K  A + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNKRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKINEL 173

Query: 199 LVVE 202
           LVVE
Sbjct: 174 LVVE 177


>gi|18028032|gb|AAL55940.1| ribosomal protein S4 [Jamesonia canescens]
 gi|18028056|gb|AAL55952.1| ribosomal protein S4 [Jamesonia scammanae]
          Length = 190

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 23  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 82  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 188


>gi|51458161|gb|AAU03429.1| ribosomal protein small subunit 4 [Asplenium incisum]
          Length = 192

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 25  QSDLRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 84  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSI 143

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 144 VGDKT-PDHLTVSLSEGDRPTGFVNRV---ANRESINLNINELLVVEYYSR 190


>gi|42417085|gb|AAS16370.1| ribosomal protein small subunit 4 [Hecistopteris pumila]
          Length = 187

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 8/170 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F L+L AKQ+++  YG ++E++     + A +++G T    +  LE RLDT
Sbjct: 23  QLASKKISQFCLRLEAKQRLRINYG-LTERQLIKYVRIARKTKGSTGQVSLQLLEMRLDT 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI  ARQ V+HRH+LVN R V+  S+RCK GD I VK       +V+ +  
Sbjct: 82  IIFQLGLASTIPTARQLVSHRHILVNRRIVDKPSFRCKPGDTITVKNL-TTCYNVVNSES 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
           L    VP+++++   N D        + +        + +   LVVE+YS
Sbjct: 141 LQNNKVPDHLTLFLSNTDQPTGLVKHMVNR---ESVSLDINELLVVEYYS 187


>gi|78102649|gb|ABB21538.1| small ribosomal protein 4 [Pedinophyllopsis abdita]
          Length = 165

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 5/169 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L   LE RLD  ++R     TI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLXQLLEMRLDNTIFRLGMSSTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           V+I SY C+ GDVI ++ K K  + + +     ++  +P +++ +   +
Sbjct: 117 VDIPSYNCEPGDVIXIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQL 165


>gi|227439285|gb|ACP31319.1| ribosomal protein small subunit 4 [Pteridium arachnoideum]
 gi|227439287|gb|ACP31320.1| ribosomal protein small subunit 4 [Pteridium arachnoideum]
 gi|227439293|gb|ACP31323.1| ribosomal protein small subunit 4 [Pteridium caudatum]
 gi|227439297|gb|ACP31325.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439299|gb|ACP31326.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439301|gb|ACP31327.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439303|gb|ACP31328.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439305|gb|ACP31329.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439307|gb|ACP31330.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439311|gb|ACP31332.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439313|gb|ACP31333.1| ribosomal protein small subunit 4 [Pteridium esculentum]
 gi|227439323|gb|ACP31338.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439325|gb|ACP31339.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439327|gb|ACP31340.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439329|gb|ACP31341.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439331|gb|ACP31342.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439333|gb|ACP31343.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439335|gb|ACP31344.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439337|gb|ACP31345.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439339|gb|ACP31346.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439341|gb|ACP31347.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439343|gb|ACP31348.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439345|gb|ACP31349.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439347|gb|ACP31350.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439349|gb|ACP31351.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439351|gb|ACP31352.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439353|gb|ACP31353.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|227439409|gb|ACP31381.1| ribosomal protein small subunit 4 [Pteridium semihastatum]
 gi|227439411|gb|ACP31382.1| ribosomal protein small subunit 4 [Pteridium semihastatum]
 gi|227439413|gb|ACP31383.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
          Length = 190

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L   LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P+++++             RI          + +   LVVE+YSR
Sbjct: 142 LGEK-IPDHLTLSLSEGSKPTGLVNRI---ASRESVNLNINELLVVEYYSR 188


>gi|17154601|emb|CAC83823.1| ribosomal protein S4 [Gelasine elongata]
          Length = 175

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 9/183 (4%)

Query: 15  IGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +G  L    K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++     
Sbjct: 1   LGALLGLTSKRP----RSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYV 55

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYR
Sbjct: 56  HIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYR 115

Query: 135 CKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           CK  D+I  K K +    +          ++P +++++         +I  S       +
Sbjct: 116 CKPRDIITTKDKERSKVLIQNYIASSPHEELPNHLTIDPLQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQ 196
            + 
Sbjct: 173 KIN 175


>gi|51860513|gb|AAU11393.1| ribosomal protein small subunit 4 [Ephedra funerea]
          Length = 196

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 14/202 (6%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKK 69
           I RR+        K P   +     +H   R   K S + + L+ KQK+  +YG ++E++
Sbjct: 1   IIRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIXFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
            R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V+
Sbjct: 56  LRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPS 184
           I SYRCK  D+I +K K  +   +       +       VP Y++ N         +I  
Sbjct: 116 IPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIID 175

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
           +       + ++  LV+E+YSR
Sbjct: 176 TKD---LQLKIKEMLVIEYYSR 194


>gi|18028042|gb|AAL55945.1| ribosomal protein S4 [Jamesonia pulchra]
          Length = 175

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 8   QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 66

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 67  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGES 125

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 126 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 173


>gi|165968061|gb|ABY75856.1| ribosomal protein small subunit 4 [Asplenium antiquum]
          Length = 188

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSNSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D++ V+ +     ++   S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLVTVRNRPTSFNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++              RI          + +   LVVE+YSR
Sbjct: 140 VGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|289576430|dbj|BAI77789.1| ribosomal protein small subunit 4 [Hymenophyllum atrovirens]
          Length = 189

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   LPGLTNKRLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194
           D+I V+ +    +   E  + +  R +P++++ +             I          + 
Sbjct: 119 DLITVRNRPSSYSGSKENIEFSRRRKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|51860465|gb|AAU11369.1| ribosomal protein small subunit 4 [Gnetum cuspidatum]
          Length = 198

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K P   +         R   K S     L+ KQK++ ++G ++E++ R
Sbjct: 6   IRRLKTLPGLISKRPKYKKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTERQLR 61

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              +   + +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN   VNI 
Sbjct: 62  QYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVVNIP 121

Query: 132 SYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           SY+C+  DVI +K K       +     ++  E+ +P +++++         +I      
Sbjct: 122 SYQCQPQDVITIKGKKTDQLKTIITRNRNKAREKKIPYHLTLDLSQNKGIVNKIIDRKD- 180

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + ++  LV+E+YSR
Sbjct: 181 --IQLNIKEILVIEYYSR 196


>gi|305672183|gb|ADM63515.1| ribosomal protein S4 [Irvingbaileya australis]
          Length = 173

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                  A +++G T   L+  LE RLD I++R    PTI  ARQ VNHRHVLVN R V+
Sbjct: 56  LLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHVLVNSRIVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + + K  A +  + + +   + P++++++         +I  +
Sbjct: 116 IPSYRCKPRDIIMARDEQKSRALIQNSLESSPHEESPKHLTLHPFQSKGFVNQIIDN 172


>gi|51458178|gb|AAU03437.1| ribosomal protein small subunit 4 [Asplenium tenerum]
          Length = 189

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 22  QSTSRKXSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 81  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLIAVRNRPTSFNALRNKSL 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P++++              RI          + +   LVVE+YSR
Sbjct: 141 EGDKT-PDHLTFALSESGRPTGLVNRI---ANRESINLNINELLVVEYYSR 187


>gi|254995547|emb|CAO82731.1| ribosomal protein S4 [Lycopodium nikoense]
          Length = 142

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 4/143 (2%)

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           ++E++     + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN
Sbjct: 1   LTEQQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVN 60

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
            R++N+ SYRCK  D+I  + +S+  A + + ++ ++   +P +++++         +I 
Sbjct: 61  NRAINVPSYRCKPKDIITARDRSESQAIIAKNNEFSQTYKIPNHLTLHSLQNKGLVNKII 120

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                      +   LVVE+YSR
Sbjct: 121 DR---ESIDSNINELLVVEYYSR 140


>gi|219973354|gb|ACL68563.1| ribosomal protein small subunit 4 [Marsilea minuta]
 gi|219973356|gb|ACL68564.1| ribosomal protein small subunit 4 [Marsilea minuta]
 gi|219973358|gb|ACL68565.1| ribosomal protein small subunit 4 [Marsilea minuta]
 gi|219973360|gb|ACL68566.1| ribosomal protein small subunit 4 [Marsilea minuta]
 gi|219973362|gb|ACL68567.1| ribosomal protein small subunit 4 [Marsilea minuta]
 gi|219973364|gb|ACL68568.1| ribosomal protein small subunit 4 [Marsilea minuta]
 gi|219973366|gb|ACL68569.1| ribosomal protein small subunit 4 [Marsilea minuta]
 gi|219973368|gb|ACL68570.1| ribosomal protein small subunit 4 [Marsilea minuta]
          Length = 188

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 2   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 57  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 117 DNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 173

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 174 NINELLIVEYYSR 186


>gi|45271076|gb|AAS56926.1| ribosomal protein small subunit 4 [Coniogramme fraxinea]
          Length = 198

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 2/198 (1%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+        K   +          Q    K S F ++L AKQ+++  YG ++E+
Sbjct: 1   LKLMRRLKNLPGLAGKDGTSNLGDFRIAGDQSASKKISQFCVRLEAKQRLRFNYG-LTER 59

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A ++RG T    +  LE RLD I+++     TI AARQ VNHRH+LVN R V
Sbjct: 60  QLLKYVRIARKTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNHRVV 119

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           +I SYR K  D++ ++ +     +   +  L    +P+++ ++          +      
Sbjct: 120 DIPSYRRKPRDILTIRSRPTSRNAAK-SEYLGGNKIPDHLILSLPKTGEPVGLVNHMANR 178

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 179 ESVDLNINELLVVEYYSR 196


>gi|32401830|gb|AAP80903.1| small ribosomal protein 4 [Welwitschia mirabilis]
          Length = 190

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K P   +         R   K S   + L+ KQK++ +YG ++E++ R
Sbjct: 1   IRRLKTLPGLTSKRPKYKKRVR--RRFSRPWWKKSQHLICLQEKQKIRFHYG-LTERQLR 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
                A R++G T   L+  LE RLD I+++     TI AARQ VNHRHVLVNGR V+I 
Sbjct: 58  QYINIAKRAQGSTGQVLLQLLEMRLDNIIFQLGIARTIPAARQIVNHRHVLVNGRVVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQ--LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189
           SYRCK  DV+ +K K+ +     + +      R VP +++++         +I       
Sbjct: 118 SYRCKPQDVLTIKTKNPEELRTIINKNRSKFRRKVPYHLTLDLAQNKGIVNKIIDRKD-- 175

Query: 190 PYPVIMQPNLVVEFY 204
              + +Q  LV+E+Y
Sbjct: 176 -IQLKIQEMLVIEYY 189


>gi|322434052|ref|YP_004216264.1| RNA-binding S4 domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321161779|gb|ADW67484.1| RNA-binding S4 domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 207

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 16/213 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKM 58
           MS R   K K+ R +G  L G  K   +  R++ PG HGQ   + K + + +QLR KQK+
Sbjct: 1   MSNRT--KFKMQRALGLELPGLGKPGALEKRNFPPGQHGQTTTRRKLTQYAVQLREKQKL 58

Query: 59  KKYYGDISEKKFRSIFKEAD-RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
             +YG + E++ R   + A   +  +   +LI+ LE RLD +V+R  F  +I AARQ V+
Sbjct: 59  LFHYG-LREEQLRRFVRTARGMNSSNWIESLIALLELRLDNVVFRLGFARSIAAARQLVS 117

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H HVLVNG+ + IGS   + G  + +   +   A    A       +P Y+      +  
Sbjct: 118 HGHVLVNGKIMTIGSATLRSGTFVRLTDYAAG-AMTEAARNAPRLPLPSYLQF---ALEG 173

Query: 178 T----FVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 VR+  + + VP+     P  V E+Y++
Sbjct: 174 VNDHGVVRMIPTPEHVPF--EFNPRQVAEYYAK 204


>gi|307828442|gb|ADN95017.1| small ribosomal protein 4 [Fossombronia pusilla]
          Length = 189

 Score =  137 bits (346), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 8/194 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       +       Y   L   ++ S+   + ++L  KQK++  YG ++  +    
Sbjct: 1   RLGVLPGLTDRIIEPKSGYTSQLVSNKKMSQ---YRIRLEEKQKLRXXYG-LTXXQXLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+   E  LB I+ R    PTI   RQ V H  + V+  +VNI SY
Sbjct: 57  VRVARKAKGSTGQILLQLXEMXLBXIIXRLGXAPTIXXXRQLVXHXXIXVDDDTVNIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
            CK GDVI V+ + K  + + ++  L ++   P +++++   +  +  +           
Sbjct: 117 SCKPGDVITVRNRQKSQSIIAKSMSLFQKAKTPNHLTLDSTRLRGSINQTIDRD---WIN 173

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 174 LKINELLVVEYYSR 187


>gi|219973380|gb|ACL68576.1| ribosomal protein small subunit 4 [Marsilea mollis]
          Length = 188

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 11/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S       Q    K S + ++L AKQ+++  YG ++E++     + A +
Sbjct: 1   GLTGKAPNRRESRV--AADQSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARK 57

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D
Sbjct: 58  TKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQD 117

Query: 140 VIEVKQKSKQLASVLE--ASQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I V+ +      +           ++P+++S   +  +       ++    K     + 
Sbjct: 118 IITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLN 174

Query: 195 MQPNLVVEFYSR 206
           +   L+VE+YSR
Sbjct: 175 INELLIVEYYSR 186


>gi|99639954|emb|CAJ45127.1| putative ribosomal protein S4 gene [Cibotium chamissoi]
          Length = 196

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)

Query: 11  IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
           + RR+ +      K+  P  TR        Q    K S F ++L AKQ+++  YG ++E+
Sbjct: 1   VIRRLKDLPGLTGKASNPGETRVAAD----QSTSRKISQFCVRLEAKQRLRFNYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
             R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH++VN R V
Sbjct: 56  LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRIV 114

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIP 183
           ++ SYRCK  D+I V+ +      +      + R   +P++++   +  +       RI 
Sbjct: 115 DVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDKIPDHLTLSLLEGNRPKGLVNRI- 173

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 174 --ANRESIDLNINELLVVEYYSR 194


>gi|17154603|emb|CAC83911.1| ribosomal protein S4 [Geissorhiza heterostyla]
          Length = 174

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 9/182 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K        G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTSKGS----KSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K K +  A +      + + ++P +++++         +I  S       + 
Sbjct: 116 KPRDIITTKNKQRSKALIQNFIDSSPQGELPNHLTIDPFQYKGLVNQIIDSK---WIGLK 172

Query: 195 MQ 196
           + 
Sbjct: 173 IN 174


>gi|47606890|gb|AAT36365.1| ribosomal protein subunit 4 [Cryptopodium bartramioides]
          Length = 174

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 5/172 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ + G I+E++  +  + A +++G T   L+  LE R
Sbjct: 5   INQSTSNXKISQYRIRLEEKQKLRXHXG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 63

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN R V+  SYRCK  D I +K + K    + +
Sbjct: 64  LDNIIFRLGMTPTIPGARQLVNHRHILVNDRIVDXPSYRCKPQDFITIKDREKYQTIISK 123

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                ++  +P +++ N         +I   L      + +   LVVE+YSR
Sbjct: 124 NIDFXQKYKIPNHLTYNXLEKKGVVNQI---LDRESXXLKINELLVVEYYSR 172


>gi|259503648|ref|ZP_05746550.1| 30S ribosomal protein S4 [Lactobacillus antri DSM 16041]
 gi|259168367|gb|EEW52862.1| 30S ribosomal protein S4 [Lactobacillus antri DSM 16041]
          Length = 142

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG ++E++F ++F  A + +  T   N ++ LE RLD +VYR     T   ARQ VNH 
Sbjct: 1   MYG-MTERQFANLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHG 59

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF 179
           H+ V+G+ V+I SY      VI V++KSK L  +  A   A    P Y+  + D +    
Sbjct: 60  HITVDGKRVDIPSYEVDVNQVIAVREKSKNLDIIKNAVD-AVVSRPSYVDFDADKLEGKL 118

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RIP+          +   L+VEFY++
Sbjct: 119 NRIPAR---EDMDADIDEALIVEFYNK 142


>gi|18028070|gb|AAL55959.1| ribosomal protein S4 [Jamesonia imbricata]
 gi|18028072|gb|AAL55960.1| ribosomal protein S4 [Jamesonia imbricata]
 gi|18028078|gb|AAL55963.1| ribosomal protein S4 [Jamesonia imbricata]
          Length = 191

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +   LVVEFYSR
Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 189


>gi|219973410|gb|ACL68591.1| ribosomal protein small subunit 4 [Marsilea mutica]
          Length = 180

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 10  QSTSKKISQFCVRLEAKQRLRFNYG-VTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D+I V+ +      +     
Sbjct: 69  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 128

Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 129 ESSRSNEIPDHLSLSILEGNKPKGVVNQV---AKRESMDLNINELLIVEYYSR 178


>gi|51458142|gb|AAU03420.1| ribosomal protein small subunit 4 [Asplenium anceps]
          Length = 181

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 14  QSNLRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 73  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 132

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 133 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 179


>gi|51860463|gb|AAU11368.1| ribosomal protein small subunit 4 [Gnetum gnemonoides]
          Length = 198

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K P   +         R   K S     L+ KQK++ ++G ++E++ R
Sbjct: 6   IRRLKTLPGLTSKRPKYKKRVR---RSSRPWWKKSQHLACLQEKQKIRFHFG-LTERQLR 61

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A + +G T   L+  LE RLD I+Y+     TI  ARQ VNHRH+LVN   VNI 
Sbjct: 62  QYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLAGTIPGARQLVNHRHILVNDYVVNIP 121

Query: 132 SYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           SYRCK  DVI +K K+      +     ++  E  +P +++++         +I      
Sbjct: 122 SYRCKPQDVITIKGKNPDQLKTIITRNRNKARENKIPYHLTLDFSQNKGIVNKIIDRKD- 180

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + ++  LV+E+YSR
Sbjct: 181 --IQLNIKEMLVIEYYSR 196


>gi|125662720|gb|ABN50310.1| small ribosomal protein 4 [Ephedra intermedia]
          Length = 195

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 14/201 (6%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKF 70
            RR+        K P   +     +H   R   K S + + L+ KQK++ +YG ++E++ 
Sbjct: 1   IRRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTERQL 55

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
           R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V+I
Sbjct: 56  RQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDI 115

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSS 185
            SYRCK  D+I +K K  +   +       +       VP Y++ N         +I  +
Sbjct: 116 PSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDT 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + ++  LV+E+YSR
Sbjct: 176 KD---LQLKIKEMLVIEYYSR 193


>gi|190361259|gb|ACE76934.1| ribosomal protein small subunit 4 [Trichomanes osmundoides]
          Length = 166

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S FG++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD IV+R
Sbjct: 13  RKISQFGIRLEAKQRLRFNYG-LTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 71

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRH+LVN   VNI SYRCK  D+I ++           + + +++
Sbjct: 72  LGIAPTIPAARQLVNHRHILVNNHIVNIPSYRCKHNDLITLR-----------SQESSKK 120

Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P++++ +             I          + +   LVVE+YSR
Sbjct: 121 RIPDHLTFSSSEGNSPKGLVNGI---ANRESIDLNINELLVVEYYSR 164


>gi|17154719|emb|CAC83931.1| ribosomal protein S4 [Zephyra elegans]
          Length = 174

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTSKRP----RSGSDLKNQFRSGKRSQYRIRLEEKQKLRFHYG-LTEQQLLRYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K K +  A +      +   ++P++++++         +I  S       + 
Sbjct: 116 KPRDIITTKDKQRSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172

Query: 195 MQ 196
           + 
Sbjct: 173 IN 174


>gi|157154455|gb|ABV24934.1| ribosomal protein small subunit 4 [Asplenium trichomanes]
          Length = 178

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 11  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 70  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 129

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 130 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 176


>gi|23477324|gb|AAN34638.1| ribosomal protein small subunit 4 [Woodwardia fimbriata]
 gi|23477338|gb|AAN34645.1| ribosomal protein small subunit 4 [Woodwardia spinulosa]
          Length = 185

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I  + +     + L    
Sbjct: 77  VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LRGES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++ +            RI          + +   LVVE+YSR
Sbjct: 136 PGGGETPDHLTASLSEGGRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183


>gi|51458187|gb|AAU03441.1| ribosomal protein small subunit 4 [Asplenium gemmiferum]
          Length = 189

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A  +RG T   L+  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARGTRGSTGQVLLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L    
Sbjct: 81  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNA-LGNKS 139

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++              RI          + +   LVVE+YSR
Sbjct: 140 LVGNKTPDHLTFAPSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 187


>gi|305672247|gb|ADM63547.1| ribosomal protein S4 [Brunia laevis]
          Length = 173

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGALPGLTNKKP----RAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 56  LLKYVRIAGKAKGSTGQVLLQLLEMRLDNVLFRLGMAPTIPGARQLVNHRHILVNGRLVD 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D+I  + +    A +      +   ++P+++ +          +I  S
Sbjct: 116 IPSYRCKPRDIITARDEQNSRALIRNYLDSSPHEELPKHLILYPFQYKGLVNQIIDS 172


>gi|219973370|gb|ACL68571.1| ribosomal protein small subunit 4 [Marsilea minuta]
          Length = 187

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 13/193 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  +R        Q    K S + ++L AKQ+++  YG ++E++     + A 
Sbjct: 1   LTGKAPNPRESRVAAD----QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIAR 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  
Sbjct: 56  KTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQ 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D I V+ +      +      + R  ++P+++S   +  +       ++    K     +
Sbjct: 116 DNITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDL 172

Query: 194 IMQPNLVVEFYSR 206
            +   L+VE+YSR
Sbjct: 173 NINELLIVEYYSR 185


>gi|110590038|gb|ABG77462.1| ribosomal protein small subunit 4 [Equisetum hyemale]
 gi|110590042|gb|ABG77464.1| ribosomal protein small subunit 4 [Equisetum hyemale subsp. affine]
          Length = 178

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q  + K S +G++L AKQ+++  YG ++E++  +  + A  ++G T   L+  LE RLD 
Sbjct: 9   QSIQKKISQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R  FVPTI +ARQ +NHRH+LVN R V++ S+ CK  D+I ++      + + +  +
Sbjct: 68  ILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDIITIEAPKTYQSILSKRLE 127

Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A+  +PE++++              + +        + +   LVVE+YSR
Sbjct: 128 SFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 176


>gi|51458184|gb|AAU03440.1| ribosomal protein small subunit 4 [Asplenium elliottii]
          Length = 188

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L +  
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNA-LRSKS 138

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++              RI          + +   LVVE+YSR
Sbjct: 139 LVGDKTPDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|157154445|gb|ABV24929.1| ribosomal protein small subunit 4 [Asplenium viride]
          Length = 172

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 5   QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 63

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 64  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSL 123

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 124 VGDKT-PDHLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 170


>gi|162415128|gb|ABX89138.1| ribosomal protein S4 [Didymodon giganteus]
          Length = 185

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E +  +  + A +++G T   L+  L  RLD +++R 
Sbjct: 24  KISQYRIRLEEKQKLRFHYG-ITEXQLLNYVRVARKAKGSTGXILLQLLXMRLDNVIFRL 82

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNH H+LVN   VBI SYRCK  D I +  + K    + +    +++ 
Sbjct: 83  GMAPTIPGARQLVNHXHILVNNXIVBIPSYRCKPQDFITINDRKKSQXXIXKNVBFSQKS 142

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P +++ N         +I   L      + +   LVV +YSR
Sbjct: 143 KIPNHLTFNSLEKKGLINQI---LDQXSIGLKINELLVVXYYSR 183


>gi|194033318|ref|YP_002000439.1| ribosomal protein S4 [Oedogonium cardiacum]
 gi|156619064|gb|ABU88210.1| ribosomal protein S4 [Oedogonium cardiacum]
 gi|186968935|gb|ACC97258.1| ribosomal protein S4 [Oedogonium cardiacum]
          Length = 2801

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 19/175 (10%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT-----------RSYGPGLHGQRRKSKPS--- 46
           MS+    + +I RR+G  +    K P              +   PG HG+ +  K     
Sbjct: 1   MSRYLGPRLRIVRRLGYLVGLTRKKPSTRLLNPDARRGIRKVLPPGQHGRSKSFKKKPYE 60

Query: 47  ----YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
                F ++L+ KQ+++ +YG I+EK+  +  ++A + +G T   L+  LE RLD  V+R
Sbjct: 61  SNEYDFLIRLKLKQRIRYHYG-ITEKQLVNYVRQARKIKGSTGRVLLRLLEMRLDNTVFR 119

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
               PTI AARQ + H H+ VN + V+I SY CK  D+I    K++ +  +    
Sbjct: 120 LHMAPTIRAARQLITHGHIYVNNKKVSIPSYSCKPKDIITPAPKTRSIQLLNNFL 174



 Score = 35.7 bits (81), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 21/99 (21%)

Query: 126  RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV--------------- 170
            R +    +     D   +K+  + L  +L+       D+P ++ +               
Sbjct: 2705 RIIYNRLFAKLRSDETLIKKWKQILTKILKKQLTPPLDIPPHLELKRIQISIIPTNIAKK 2764

Query: 171  NHDNMV---ATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            N+ N++    T + +PS        + +   L+VE+YSR
Sbjct: 2765 NNKNLIIPIGTVINLPSRK---TVGISVLERLIVEYYSR 2800


>gi|66866229|gb|AAY57784.1| small ribosomal protein 4 [Rhizogonium pennatum]
          Length = 207

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 13/204 (6%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + +I RR+G       K P    S    +       K S + ++L  KQK++ +YG I+E
Sbjct: 7   RVRIIRRLGTLPGLTNKIPQLKSSS---ISHSTSNKKISQYRIRLEEKQKLRFHYG-ITE 62

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++  +  + A +++G T   L+  LE R D +++R    PTI  ARQ VNHRH+LVN R 
Sbjct: 63  RQLLNYVRIARKAKGSTGEVLLQLLEMRSDNVIFRLGMAPTIPGARQLVNHRHILVNDRI 122

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASV-----LEASQLAER-DVPEYISVNHDNMVATFVR 181
           V+I SYRCK  D I +K + K    +      +     ++  +P +++ N         +
Sbjct: 123 VDIPSYRCKPQDFITIKDQQKYQTIIXXXXXXKNIDFYQKYKIPNHLTYNLLEKKGLVNQ 182

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYS 205
           I   L      + +   L  E+YS
Sbjct: 183 I---LDRESIDLEINGLLGGEYYS 203


>gi|23477320|gb|AAN34636.1| ribosomal protein small subunit 4 [Woodwardia virginica]
          Length = 185

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN R V++ SYRCK  D+I V+ +     + L    
Sbjct: 77  VIFHLGMASTIPAARQLVNHRHILVNNRVVDVPSYRCKPKDIITVRNRPTSCNA-LRGES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++V+            RI          + +   LVVE+YSR
Sbjct: 136 XGGGETPDHLTVSLSEGNRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183


>gi|51458176|gb|AAU03436.1| ribosomal protein small subunit 4 [Asplenium prolongatum]
          Length = 193

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 26  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 84

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 85  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRNKSL 144

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++      D        I          + +   LVVE+YSR
Sbjct: 145 VGDKT-PDHLTFALSEGDRPTGLVNCI---ANRESINLNINELLVVEYYSR 191


>gi|227439291|gb|ACP31322.1| ribosomal protein small subunit 4 [Pteridium caudatum]
          Length = 190

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L   LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P++++++            RI          + +   LVVE+YSR
Sbjct: 142 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 188


>gi|118724415|gb|ABL10781.1| ribosomal protein small subunit 4 [Pellaea maxima]
          Length = 195

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++      +      +      
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRNEVPDHLTLSISKTSELTGLVNHM---ASR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|118724337|gb|ABL10742.1| ribosomal protein small subunit 4 [Pellaea rotundifolia]
          Length = 195

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLSGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T   L+  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVLLQLLEMRLDNVIFKLGMASTIPAARQLVSHRHILVNHRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D++ ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDILTIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|219973430|gb|ACL68601.1| ribosomal protein small subunit 4 [Marsilea oligospora]
          Length = 186

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 16  QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D+I ++ +      +     
Sbjct: 75  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITIRNRPTSYNVLKGGVF 134

Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 135 ESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 184


>gi|165968063|gb|ABY75857.1| ribosomal protein small subunit 4 [Asplenium lamprophyllum]
          Length = 188

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     +++  S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALINKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++              RI          + +   LVVE+YSR
Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|17154599|emb|CAC83844.1| ribosomal protein S4 [Syringodea bifucata]
          Length = 175

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 10/183 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G +     K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GASPGLTSKRP----RSGSDLKNQPRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K K +  A +      +  + ++P +++++         +I  S       +
Sbjct: 116 KPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQ 196
            + 
Sbjct: 173 KIN 175


>gi|110590044|gb|ABG77465.1| ribosomal protein small subunit 4 [Equisetum arvense]
          Length = 178

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 9/181 (4%)

Query: 30  RSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89
           ++   G + Q  + K S + ++L AKQ+++  YG ++E++  +  + A  ++G T   L+
Sbjct: 1   KNQASG-NDQSNQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILL 58

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             LE RLD I++R   VPTI +ARQ +NHRH+LVN R V+I S+ CK  D+I +      
Sbjct: 59  QLLEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSFHCKPKDIITIGAPKTY 118

Query: 150 LASVLEASQ-LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
            + + +  +  A+  +P+++++              + +        + +   LVVE+YS
Sbjct: 119 QSIITKRIEAFAKDQIPDHLTLSLSEQKKPKGFVNYLINR---ESIGLKINELLVVEYYS 175

Query: 206 R 206
           R
Sbjct: 176 R 176


>gi|26399124|sp|P59152|RR4_WOOUN RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23477340|gb|AAN34646.1| ribosomal protein small subunit 4 [Woodwardia unigemmata]
          Length = 185

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I V+ +     + L+   
Sbjct: 77  VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRNRPTSCNA-LKGES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++ +            RI          + +   LVVE+YSR
Sbjct: 136 PGGGETPDHLTASLSEGSRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183


>gi|17154595|emb|CAC83836.1| ribosomal protein S4 [Schizostylis coccinea]
          Length = 177

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G         P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTS--PSKRSRSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 57

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 58  IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 117

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K K +  A +     L+ R  ++P +++++         +I  S       +
Sbjct: 118 KPRDIITTKNKQRSKALIQNFIDLSPRQGELPNHLTIDPFQYKGFVNQIIDSK---WIGL 174

Query: 194 IMQ 196
            + 
Sbjct: 175 KIN 177


>gi|71679582|gb|AAZ38859.1| ribosomal protein small subunit 4 [Hymenophyllum javanicum]
          Length = 183

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 13  QSSSRKVSQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++     TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E  +
Sbjct: 72  IVFQLGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSRSKENIE 131

Query: 159 LAER-DVPEYISV----NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              R  +P++++     +++        I          + +   LVVE+YSR
Sbjct: 132 FFRRKKIPDHLTFSFSEDNNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 181


>gi|51458192|gb|AAU03443.1| ribosomal protein small subunit 4 [Asplenium angustum]
          Length = 190

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ +NHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VLFHLGMASTIPAARQLINHRHILVNNCIVDIPSYRCKPKDLISVRNRLTSSNALRNKSL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + E+  P++++              RI          + +   LVVE+YSR
Sbjct: 142 VGEKT-PDHLTFALSEDGRPTGLVNRI---ANRESINLNINELLVVEYYSR 188


>gi|51458182|gb|AAU03439.1| ribosomal protein small subunit 4 [Asplenium anisophyllum]
          Length = 191

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 24  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARRTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 83  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRNKSL 142

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++              RI          + +   LVVE+YSR
Sbjct: 143 VGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 189


>gi|289576404|dbj|BAI77776.1| ribosomal protein small subunit 4 [Hymenophyllum cupressiforme]
 gi|289576428|dbj|BAI77788.1| ribosomal protein small subunit 4 [Hymenophyllum pumilum]
          Length = 189

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   LPGLTSKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVI 194
           D+I V+ +    +   E    + R  +P++++      +        I          + 
Sbjct: 119 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|51458119|gb|AAU03409.1| ribosomal protein small subunit 4 [Asplenium normale]
          Length = 176

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 9   QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 68  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSI 127

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 128 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 174


>gi|38112446|gb|AAR11303.1| ribosomal protein S4 [Austrogramme marginata]
          Length = 191

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K   +          Q    K S F ++L  KQK++  YG ++E++     + A
Sbjct: 3   LPGLTGKDKTSNSGDFRVASEQSASKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIA 61

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            ++RG T   L+  LE RLD I++R     TI AARQ VNHRH+LVN   V+I SYRCK 
Sbjct: 62  RKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNECIVDIPSYRCKP 121

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
            D+I ++++     +  +   +    +P++++++          + +        + +  
Sbjct: 122 KDIITIRKRPIFHTAAKD-EFIGRAGIPDHLTLSFSKAGEPVGLVNNMANRESVDLQINE 180

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 181 LLVVEYYSR 189


>gi|289576426|dbj|BAI77787.1| ribosomal protein small subunit 4 [Hymenophyllum bivalve]
          Length = 189

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   LPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVI 194
           D+I V+ +    +   E    + R  +P++++      +        I          + 
Sbjct: 119 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|17154592|emb|CAC79546.1| ribosomal protein S4 [Hesperantha pseudopilosa]
          Length = 177

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G +       P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GASPGLTS--PSKRPRSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 57

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 58  IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 117

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K K +  A +      +  + ++P +++++         +I  S       +
Sbjct: 118 KPRDIITTKNKQRSKALIQNFIDSSPHQGELPNHLTIDPFQYKGLVNQIIDSK---WIGL 174

Query: 194 IMQ 196
            + 
Sbjct: 175 KIN 177


>gi|51458180|gb|AAU03438.1| ribosomal protein small subunit 4 [Asplenium simplicifrons]
          Length = 190

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRVARRTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSFNALRNKSL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++              RI          + +   LVVE+YSR
Sbjct: 142 VGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 188


>gi|165935727|gb|ABY75160.1| ribosomal protein S4 [Asplenium australasicum]
          Length = 188

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +   + ++   S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSVNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  P++++              RI          + +   LVVE+YSR
Sbjct: 140 LGDKT-PDHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|45271090|gb|AAS56929.1| ribosomal protein small subunit 4 [Asplenium scolopendrium]
          Length = 191

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 24  QSTSRKNFQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 83  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKSL 142

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V+            R+          + +   LVVE+YSR
Sbjct: 143 VGDKT-PDHLTVSLSEGNRPTGLVNRV---ANRESINLNINELLVVEYYSR 189


>gi|184128075|gb|ACC67937.1| ribosomal protein small subunit 4 [Equisetum ramosissimum subsp.
           debile]
          Length = 170

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q  + K S +G++L AKQ+++  YG ++E++  +  + A  ++G T   L+  LE RLD 
Sbjct: 1   QSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R  FVPTI +ARQ +NHRH+LVN R V++ S+ CK  D+I +       + + +  +
Sbjct: 60  ILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLE 119

Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A+  +PE++++              + +        + +   LVVE+YSR
Sbjct: 120 SFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 168


>gi|118724453|gb|ABL10800.1| ribosomal protein small subunit 4 [Cheilanthes acrostica]
          Length = 195

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 2/195 (1%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K           +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKKNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD I+++     TI AARQ VNHRH+LVNG  V+I 
Sbjct: 60  NYVRIARRTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNGHIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SYRCK  D+I ++ +     +      L   +VP++++++      +   +  +      
Sbjct: 120 SYRCKSKDIITIRNRPTSYNAAK-GKSLGRDEVPDHLTLSISKTSESTGLVNHTANRESV 178

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE++SR
Sbjct: 179 NLDINELLVVEYHSR 193


>gi|219973336|gb|ACL68554.1| ribosomal protein small subunit 4 [Marsilea hirsuta]
          Length = 178

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 8   QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 66

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D+I V+ +      +     
Sbjct: 67  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 126

Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 127 ESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDLNINELLIVEYYSR 176


>gi|99640045|emb|CAJ45146.1| putative ribosomal protein S4 gene [Sphaeropteris brunei]
          Length = 195

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 16/202 (7%)

Query: 12  DRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
            RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG ++E+ 
Sbjct: 1   IRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTERL 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
            R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V+
Sbjct: 56  LR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVD 114

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIPS 184
           + SYRCK  D+I V+ +      +      + R  ++P++++      +       RI  
Sbjct: 115 VPSYRCKPKDIITVRNRPTSYKGLRSGINESSRGDEIPDHLTFSLLEDNRPKGLVNRI-- 172

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LVVE+YSR
Sbjct: 173 -ANRESIDLNINELLVVEYYSR 193


>gi|51458199|gb|AAU03446.1| ribosomal protein small subunit 4 [Asplenium affine]
          Length = 190

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    + S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 23  QSTSRRTSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+ VN   V+I SYRCK  D I V+ +     + L    
Sbjct: 82  VLFHLGMAXTIPAARQLVNHRHISVNNCIVDIPSYRCKPKDFITVRNRPTSCNA-LRXKS 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++V     D       R+          + +   LVVE+YSR
Sbjct: 141 LVGGKTPBHLTVSLSEGDRPXGLVNRV---ANRESINLNINELLVVEYYSR 188


>gi|26399122|sp|P59151|RR4_WOORA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|23477336|gb|AAN34644.1| ribosomal protein small subunit 4 [Woodwardia radicans]
          Length = 185

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I V+ +     + L+   
Sbjct: 77  VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRNRPTSCNA-LKGES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++ +            RI          + +   LVVE+YSR
Sbjct: 136 PGGGETPDHLTASLSEGSRPTGLVNRI---ANRESVSLNINELLVVEYYSR 183


>gi|290467467|gb|ADD25851.1| small ribosomal protein 4 [Hymenophyllum dicranotrichum]
          Length = 187

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 13/192 (6%)

Query: 21  GRPKSPVNTR--SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           G     +N R     P     R+    S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   GLTNKKLNVREARIAPDQSSSRK---VSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++   PTI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNIVFQSGMSPTIPAARQLVNHRHILVNNHIVDIPSYRCKPK 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194
           D+I V+ +    +   E    + R  +P++++ +             I          + 
Sbjct: 117 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLN 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|51458121|gb|AAU03410.1| ribosomal protein small subunit 4 [Asplenium normale]
          Length = 185

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+ G T    +  LE RLD 
Sbjct: 18  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTXGSTGQVPLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++     
Sbjct: 77  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNALRNKFI 136

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 137 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 183


>gi|18027948|gb|AAL55898.1| ribosomal protein S4 [Anogramma guatemalensis]
          Length = 191

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQK++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSSSKKISQFCVRLETKQKLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+R     TI AARQ VNHRH+LVN R VNI SYRCK  D+I +  +S    +V++   
Sbjct: 83  IVFRLGMASTIPAARQLVNHRHILVNHRIVNIPSYRCKPKDIITIPNRS-NFHNVMKDES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P+++++              +          + +    VVE+YSR
Sbjct: 142 IGGDVIPDHLTLYFSKTGEAAGLVNHM---ANRESVDLDINELFVVEYYSR 189


>gi|170516223|gb|ACB15113.1| small ribosomal protein 4 [Microbiota decussata]
          Length = 200

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 11/204 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI            K+P   R   P      +  KPS + ++L+ KQ+++ +YG + E
Sbjct: 1   RLKIISCFKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 58  RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRI 182
           V+I SYRCK  D+I +K+K      + +   + ++D   VP +++             +I
Sbjct: 118 VDIPSYRCKPQDLISIKEKEGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             + +     + +   LVVE+YSR
Sbjct: 178 IDNKR---IGLKINELLVVEYYSR 198


>gi|110590040|gb|ABG77463.1| ribosomal protein small subunit 4 [Equisetum laevigatum]
          Length = 178

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q  + K S +G++L AKQ+++  YG ++E++  +  + A  ++G T   L+  LE RLD 
Sbjct: 9   QSIQKKVSQYGIRLEAKQRLRFNYG-LTERQLLNYVRIARGAKGSTGQILLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R  FVPTI +ARQ +NHRH+LVN R V++ S+ CK  D+I +       + + +  +
Sbjct: 68  ILFRLGFVPTIPSARQLINHRHILVNNRIVDVPSFHCKPKDIITIGAPKTYQSILSKRLE 127

Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A+  +PE++++              + +        + +   LVVE+YSR
Sbjct: 128 SFAKDQIPEHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 176


>gi|290467489|gb|ADD25862.1| small ribosomal protein 4 [Hymenophyllum wilsonii]
          Length = 187

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A ++
Sbjct: 1   GLTNKKLNLREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKA 58

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+
Sbjct: 59  KGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDL 118

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQ 196
           I V+ +    +   E    ++R  +P++++ +             I          + + 
Sbjct: 119 ITVRNRPSSYSGSKENIGFSQRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNIN 175

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 176 ELLVVEYYSR 185


>gi|563205|gb|AAB17600.1| ribosomal protein 4 [Mycobacterium bovis]
 gi|1589489|prf||2211287F ribosomal protein S4
          Length = 132

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/135 (40%), Positives = 74/135 (54%), Gaps = 3/135 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M++      +  RR+  +L G  +     R Y PG HG+ R  +  Y  LQL+ KQK + 
Sbjct: 1   MARYTGPVTRKSRRLRTDLVGGDQ-AFEKRPYPPGQHGRARIKESEYL-LQLQEKQKARF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            YG + EK+FR  ++EA R  G T   L+  LESRLD ++YRA    T   ARQ V+H H
Sbjct: 59  TYG-VMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGH 117

Query: 121 VLVNGRSVNIGSYRC 135
             VNG  VN+ SYR 
Sbjct: 118 FNVNGVHVNVPSYRV 132


>gi|17154481|emb|CAC83932.1| ribosomal protein S4 [Doryanthes excelsa]
 gi|17154717|emb|CAC83928.1| ribosomal protein S4 [Tecophilaea cyanocrocus]
          Length = 174

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K K +  A +      +   ++P++++++         +I  S       + 
Sbjct: 116 KPRDIITTKDKQRSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172

Query: 195 MQ 196
           + 
Sbjct: 173 IN 174


>gi|289449916|ref|YP_003475187.1| 30S ribosomal protein S4 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184463|gb|ADC90888.1| ribosomal protein S4 [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 203

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 13/190 (6%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           ++    + K  RR G N++G P   +       G      + K S +  QL  KQK+K Y
Sbjct: 5   ARSMGPRFKQSRRFGVNIFGNPNE-LKRGPKKDG------RKKESEYAKQLNEKQKLKLY 57

Query: 62  YGDISEKKFRSIFKEADR----SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           YG +SEK+ ++  ++A +    S       L++ LE RLD + YR  F  ++  ARQ V 
Sbjct: 58  YG-VSEKQMQNCMRKAKKQAQRSDMILGDILVTTLERRLDNLTYRLGFARSLRQARQMVV 116

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVA 177
           H H+ VNG+ V+I S+ C  GD I V+ K+K+   +    +     VP Y+ +N +N+  
Sbjct: 117 HGHIAVNGKKVDIPSFVCSVGDEISVRSKAKEFELIKANMEATSFVVP-YLQLNKENLQG 175

Query: 178 TFVRIPSSLK 187
                P    
Sbjct: 176 FLTTYPQRAD 185


>gi|237797456|ref|ZP_04585917.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020306|gb|EGI00363.1| 30S ribosomal protein S4 [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 151

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 4/133 (3%)

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           K+A   +G T  NL+  LE RLD +VYR  F  T   +RQ V+H+ V VNG++VN+ SY+
Sbjct: 22  KKAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLVSHKSVSVNGKTVNVPSYQ 81

Query: 135 CKEGDVIEVKQKSKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
            + GDV+ +++K+K    +++A  L A+R   E++ V+ +     F  +P+         
Sbjct: 82  VRAGDVVAIREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKKSGVFKNVPARSD---LSA 138

Query: 194 IMQPNLVVEFYSR 206
            +  +L+VE YS+
Sbjct: 139 DINESLIVELYSK 151


>gi|18028058|gb|AAL55953.1| ribosomal protein S4 [Jamesonia scammanae]
          Length = 188

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 8/166 (4%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD I++R 
Sbjct: 26  KISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDNILFRL 84

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
               TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   +    
Sbjct: 85  GMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGESIGRDG 143

Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P++++++            R+          + +   LVVEFYSR
Sbjct: 144 IPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 186


>gi|51458110|gb|AAU03406.1| ribosomal protein small subunit 4 [Asplenium septentrionale subsp.
           caucasicum]
          Length = 188

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 8/170 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 82  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRNKSL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
           + ++  P++++V     D       R+          + +   LVVE+YS
Sbjct: 142 VGDKT-PDHLTVSLSEGDRPPGLVNRV---ANRESINLNINELLVVEYYS 187


>gi|125662708|gb|ABN50304.1| small ribosomal protein 4 [Ephedra equisetina]
          Length = 199

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 14/205 (6%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDIS 66
           +  I  R+        K P   +     +H   R   K S + + L+ KQK++ +YG ++
Sbjct: 1   RFIIISRLKTLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LT 55

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E++ R     A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN  
Sbjct: 56  ERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHH 115

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVR 181
            V+I SYRCK  D+I +K K  +   +       +       VP Y++ N         +
Sbjct: 116 IVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNK 175

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
           I  +       + ++  LV+E+YSR
Sbjct: 176 IIDTKD---LQLKIKEMLVIEYYSR 197


>gi|157272411|gb|ABV27020.1| ribosomal protein small subunit 4-like protein [Azolla microphylla]
 gi|157272413|gb|ABV27021.1| ribosomal protein small subunit 4-like protein [Azolla mexicana]
 gi|157272415|gb|ABV27022.1| ribosomal protein small subunit 4-like protein [Azolla mexicana]
 gi|157272417|gb|ABV27023.1| ribosomal protein small subunit 4-like protein [Azolla mexicana]
 gi|157272425|gb|ABV27027.1| ribosomal protein small subunit 4-like protein [Azolla microphylla]
 gi|157272427|gb|ABV27028.1| ribosomal protein small subunit 4-like protein [Azolla microphylla]
          Length = 203

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        ++     +            K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKSLPGLAGEASNAGETRVAADQSISTPKKISQFCVRLEAKQRLRYNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE RLD I++     PTI AARQ VNHRH+LVN   
Sbjct: 60  RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHLGMAPTIPAARQPVNHRHILVNDHI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181
           V++ SYRCK  D+I V+ +   L  +             +P++++++            +
Sbjct: 120 VDVPSYRCKPKDIITVRNRPTSLNGLKRTGIIESSRGNQIPDHLTLSFSEDNRPKGLVNK 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
             +        + +    VVE+YSR
Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201


>gi|289576414|dbj|BAI77781.1| ribosomal protein small subunit 4 [Hymenophyllum imbricatum]
          Length = 188

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A +
Sbjct: 1   PGLTNKRLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARK 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKD 118

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIM 195
           +I V+ +    +   E+ + + R  +P++++ +             I          + +
Sbjct: 119 LITVRNRPSSYSGSKESIEFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNI 175

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 176 NELLVVEYYSR 186


>gi|118724341|gb|ABL10744.1| ribosomal protein small subunit 4 [Pellaea falcata var. nana]
          Length = 195

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLSGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T   L+  LE RLD ++++     TI AARQ V+HRHVLVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVLLQLLEMRLDNVIFKLGMASTIPAARQLVSHRHVLVNHRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D++ ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDILTIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|227439295|gb|ACP31324.1| ribosomal protein small subunit 4 [Pteridium caudatum]
 gi|227439401|gb|ACP31377.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pseudocaudatum]
          Length = 189

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L   LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 81  VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P++++++            RI          + +   LVVE+YSR
Sbjct: 141 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 187


>gi|18028030|gb|AAL55939.1| ribosomal protein S4 [Jamesonia bogotensis]
          Length = 191

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 9/194 (4%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
            +L G       + S    + G Q    K S F ++L  KQ+++  YG ++E++     +
Sbjct: 1   TSLPGLTGRDKTSNSLDFRVAGDQSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVR 59

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A ++RG T   L+  LE RLD I++R     TI AARQ VNHRH+LVN R V+I SYRC
Sbjct: 60  IARKTRGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRC 119

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYP 192
              D+I ++ +     ++ +   +    +P++++++            R+          
Sbjct: 120 NPKDIITIRNRPISH-NMTKGESIGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESID 175

Query: 193 VIMQPNLVVEFYSR 206
           + +    VVEFYSR
Sbjct: 176 LEINELFVVEFYSR 189


>gi|227439289|gb|ACP31321.1| ribosomal protein small subunit 4 [Pteridium caudatum]
 gi|227439315|gb|ACP31334.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pinetorum]
 gi|227439319|gb|ACP31336.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pinetorum]
 gi|227439321|gb|ACP31337.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pinetorum]
 gi|227439355|gb|ACP31354.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           capense]
 gi|227439357|gb|ACP31355.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           capense]
 gi|227439359|gb|ACP31356.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           capense]
 gi|227439361|gb|ACP31357.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           capense]
 gi|227439363|gb|ACP31358.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           capense]
 gi|227439365|gb|ACP31359.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           capense]
 gi|227439367|gb|ACP31360.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           centrali-africanum]
 gi|227439369|gb|ACP31361.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           centrali-africanum]
 gi|227439371|gb|ACP31362.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           centrali-africanum]
 gi|227439373|gb|ACP31363.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           decompositum]
 gi|227439375|gb|ACP31364.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439377|gb|ACP31365.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439379|gb|ACP31366.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439381|gb|ACP31367.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439383|gb|ACP31368.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439385|gb|ACP31369.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439387|gb|ACP31370.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439389|gb|ACP31371.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           japonicum]
 gi|227439391|gb|ACP31372.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           latiusculum]
 gi|227439393|gb|ACP31373.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           latiusculum]
 gi|227439395|gb|ACP31374.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           latiusculum]
 gi|227439397|gb|ACP31375.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           latiusculum]
 gi|227439399|gb|ACP31376.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           latiusculum]
 gi|227439403|gb|ACP31378.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pseudocaudatum]
 gi|227439405|gb|ACP31379.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pubescens]
 gi|227439407|gb|ACP31380.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pubescens]
 gi|227439415|gb|ACP31384.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|227439417|gb|ACP31385.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|227439419|gb|ACP31386.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|227439421|gb|ACP31387.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|227439423|gb|ACP31388.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|227439425|gb|ACP31389.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|227439427|gb|ACP31390.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|227439431|gb|ACP31392.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pubescens]
 gi|227439433|gb|ACP31393.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pubescens]
 gi|227439435|gb|ACP31394.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pseudocaudatum]
          Length = 190

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L   LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P++++++            RI          + +   LVVE+YSR
Sbjct: 142 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 188


>gi|219973376|gb|ACL68574.1| ribosomal protein small subunit 4 [Marsilea mollis]
 gi|219973378|gb|ACL68575.1| ribosomal protein small subunit 4 [Marsilea mollis]
          Length = 179

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 9   QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D+I V+ +      +     
Sbjct: 68  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 127

Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 128 ESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 177


>gi|17154715|emb|CAC83927.1| ribosomal protein S4 [Walleria mackenzii]
          Length = 174

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTSKRP----RSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K K +  A +      +   ++P++++++         +I  S       + 
Sbjct: 116 KPRDIITTKDKERSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172

Query: 195 MQ 196
           + 
Sbjct: 173 IN 174


>gi|16930546|gb|AAL31954.1| ribosomal protein small subunit 4 [Stenochlaena milnei]
          Length = 177

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 8/160 (5%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           L+L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD +++      TI
Sbjct: 21  LRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDNVIFHLGMASTI 79

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
            AARQ VNHRH+LVN R V+I SYRCK  D+I ++ +S    + L          P++++
Sbjct: 80  PAARQLVNHRHILVNNRIVDIPSYRCKPKDIITLRNQS-TFCNALRGESPGGGKTPDHLT 138

Query: 170 VNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           V+            RI          + +   LVVE+YSR
Sbjct: 139 VSLSEGNRPTGVVNRI---ANRESVNLNINELLVVEYYSR 175


>gi|23477322|gb|AAN34637.1| ribosomal protein small subunit 4 [Woodwardia auriculata]
          Length = 185

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I V+ +     + L    
Sbjct: 77  VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRNRPTSCNA-LRGES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++ +            RI          + +   LVVE+YSR
Sbjct: 136 PGGGETPDHLTASLSEGNRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183


>gi|29422411|gb|AAO84601.1| small ribosomal protein 4 [Anacolia laevisphaera]
          Length = 144

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 4/143 (2%)

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN
Sbjct: 3   ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVN 62

Query: 125 GRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIP 183
              V+I SYRCK  D I +K + K    + +     ++  +P +++ N         +I 
Sbjct: 63  DHIVDIPSYRCKPQDFITIKDRQKSQTIISKNIDFYQKYKIPNHLTYNSLENKGLVNQI- 121

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
             L      + +   LVVE+YSR
Sbjct: 122 --LDRESIGLKINELLVVEYYSR 142


>gi|45271084|gb|AAS56927.1| ribosomal protein small subunit 4 [Saccoloma inaequale]
          Length = 174

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A +++G T    +  LE RLD 
Sbjct: 7   QSGSKKISQFCVRLEAKQRLRFSYG-LTERQPLNYVRIARKTKGSTGQVSLQLLEMRLDN 65

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI  ARQ VNHRH+LVN R V+I SYRC+  D+I V+ +    ++VL  + 
Sbjct: 66  VIFHPGVASTIPCARQLVNHRHILVNNRIVDIPSYRCEPKDIITVRNRPTS-SNVLRNAS 124

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P+++++             RI          + +   LVVE+YSR
Sbjct: 125 FGRDKIPDHLTLSLTEGSRPTGLVNRI---ANRESVDLNINELLVVEYYSR 172


>gi|310707173|gb|ADP08972.1| Rps4 [Saccoloma elegans]
          Length = 173

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A +++G T    +  LE RLD 
Sbjct: 6   QSGSKKISQFCVRLEAKQRLRFSYG-LTERQPLNYVRIARKTKGSTGQVSLQLLEMRLDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN R V+I SYRC+  D+I V+ +    ++VL  + 
Sbjct: 65  VIFHPGVASTIPAARQLVNHRHILVNNRIVDIPSYRCEPKDIITVRNRPTS-SNVLRNAS 123

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P+++++     +       RI          + +   LVVE+YSR
Sbjct: 124 FGRDKIPDHLTLSLTEGNRPTGLVNRI---ANRESVDLNINELLVVEYYSR 171


>gi|111283706|gb|ABH09203.1| small ribosomal protein 4 [Neogrollea notabilis]
          Length = 170

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 5/172 (2%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I RR+G       K+      Y           K S + ++L  KQK++ +YG ++E++ 
Sbjct: 1   IIRRLGALPGLTNKTLKPKSGY---NDRSTSNRKVSQYRIRLEEKQKLRFHYG-LTERQL 56

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I
Sbjct: 57  LKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPEARQLVNHRHITINDNIVDI 116

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVR 181
            SY C+ GD I ++ K K  + + +   L +   +P +++ +   +  +  +
Sbjct: 117 PSYNCQPGDFIIIRDKQKSQSIITKNFNLFQNSKIPSHLTFDSIKLYGSINQ 168


>gi|16565372|gb|AAL26202.1|AF313600_1 small ribosomal protein 4 [Salvinia molesta]
 gi|99640366|emb|CAJ45117.1| putative ribosomal protein S4 gene [Salvinia oblongifolia]
          Length = 201

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 12/205 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K P    +       Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKSLPGLAGKIPNPRETRI--AADQSTPKKISQFCVRLEAKQRLRYNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE RLD I++     PTI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHLGMAPTIPAARQSVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEA---SQLAERDVPEYISVNHDN---MVATFVR 181
           V++ SYRCK  D I V+ +   + S   +          +P++++++            +
Sbjct: 118 VDVPSYRCKPRDTITVRNRPTSINSSKRSDIVESSRGNLIPDHLTLSFSEDNRPRGLVNQ 177

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
             +        + +    VVE+YSR
Sbjct: 178 TATR---ESIDLNINELSVVEYYSR 199


>gi|157154425|gb|ABV24919.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154429|gb|ABV24921.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154431|gb|ABV24922.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154433|gb|ABV24923.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154435|gb|ABV24924.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154439|gb|ABV24926.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154441|gb|ABV24927.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154443|gb|ABV24928.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154447|gb|ABV24930.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154449|gb|ABV24931.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154451|gb|ABV24932.1| ribosomal protein small subunit 4 [Asplenium viride]
 gi|157154453|gb|ABV24933.1| ribosomal protein small subunit 4 [Asplenium adulterinum]
          Length = 178

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 11  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 70  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSL 129

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 130 VGDKT-PDHLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 176


>gi|237688497|ref|YP_002905116.1| ribosomal protein S4 [Picea sitchensis]
 gi|226875325|gb|ACO89064.1| ribosomal protein S4 [Picea sitchensis]
          Length = 201

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 9/207 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR+        K P N +        +    K S + ++   KQK++ 
Sbjct: 1   MSRYRGPRLKIIRRLKTLPGLTSKRPKNRKDS----MNRSSSRKISQYRIRPEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A R++G T                                NH H
Sbjct: 57  HYG-LTERQLLKYVRIARRAKGSTGQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHVH 115

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD-VPEYISVNHDNMVATF 179
           + VN   V+I SY CK  DVI ++ + +  A + +   L +RD +P +++ +        
Sbjct: 116 IRVNDHMVDIPSYPCKPQDVITIRDQQRLRAIIRKNLDLFQRDKLPNHLTFHSLQYKGFI 175

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I  S       + +   LVVE+YSR
Sbjct: 176 NQIIDSK---WISLKINELLVVEYYSR 199


>gi|108861090|gb|ABG21417.1| ribosomal protein small subunit 4 [Marsilea minuta]
          Length = 185

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 15  QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--A 156
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D I V+ +      +     
Sbjct: 74  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDNITVRNRPTSYNVLKGGVF 133

Query: 157 SQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 134 ESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDLNINELLIVEYYSR 183


>gi|219973384|gb|ACL68578.1| ribosomal protein small subunit 4 [Marsilea mollis]
          Length = 188

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLIYVRIARKTKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D+I V+ +      +     
Sbjct: 77  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVF 136

Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 137 ESSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 186


>gi|311901206|gb|ADQ13153.1| small ribosomal protein 4 [Nephrolepis rivularis]
          Length = 177

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 10  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++     
Sbjct: 69  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNALRAKFP 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++      +        I          + +   LVVE+YSR
Sbjct: 129 VGDKT-PDHLTFXLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 175


>gi|124021092|gb|ABM88819.1| small ribosomal protein subunit 4 [Aneura pinguis]
          Length = 176

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 10  STSNKKTSQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157
            ++R   VPTI AARQ VNHRHV +N   ++I SY C+ GD+I +  + K       + +
Sbjct: 69  TIFRLGMVPTIPAARQLVNHRHVSINDHIIDIPSYNCRPGDIITINTREKFRLVNWRDMN 128

Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L + ++P +++ +    + +  +I          + +   LVVE+YSR
Sbjct: 129 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 174


>gi|157272407|gb|ABV27018.1| ribosomal protein small subunit 4-like protein [Azolla caroliniana]
          Length = 203

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        ++     +            K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKSLPGLAGEASNAGETRVAADQSISTPKKISQFCVRLEAKQRLRYNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE RLD I++     PTI AARQ VNHRH+LVN   
Sbjct: 60  RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNILFHLGMAPTIPAARQPVNHRHILVNDHI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181
           V++ SYRCK  D+I V+ +   L  +             +P+++S++            +
Sbjct: 120 VDVPSYRCKPKDIITVRNRPTSLNGLKRTGIIESFRGNQIPDHLSLSFSEDNRPKGLVNK 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
             +        + +    VVE+YSR
Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201


>gi|290467477|gb|ADD25856.1| small ribosomal protein 4 [Hymenophyllum peltatum]
          Length = 182

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 13  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E  +
Sbjct: 72  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDIITVRNRPSSYSGSKETIE 131

Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++ +             I          + +   LVVE+YSR
Sbjct: 132 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 180


>gi|246880741|gb|ACS95053.1| ribosomal protein S4 [Dunaliella salina]
          Length = 252

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 18/175 (10%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRKSK------ 44
           M++    K KI RRIG+      K P             +   PG HG  +  K      
Sbjct: 1   MARYIGPKLKIIRRIGKLRGLTRKKPFRRVYRGRGPLRGKVIPPGQHGLIKLFKTRPYDS 60

Query: 45  -PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
             S + ++L+ KQ+++  YG ++E++  +  ++A + +  T   L+  LE RLD IV+R 
Sbjct: 61  CESDYLIRLKVKQRLRYNYG-LTERQLVNYVRKAKKIKEATGQVLLQLLEMRLDNIVFRL 119

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
              PTI AARQ+++H H+ VN + VNI SY CK  DVI V  K K L  +     
Sbjct: 120 NMAPTIVAARQYISHGHIRVNNKKVNIPSYMCKPKDVISVAMKEKSLILINRNLN 174


>gi|18027946|gb|AAL55897.1| ribosomal protein S4 [Pityrogramma austroamericana]
          Length = 191

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 2/168 (1%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S F ++L  KQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  SSASKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVSLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+R     TI AARQ VNHRH+LVN R V+I SYRCK  D+I ++ +     +V++   
Sbjct: 83  IVFRLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPKDLITIRNRPTSR-NVVKGES 141

Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++      T   +          + +    VVE+YSR
Sbjct: 142 IGRDGIPDHLTLSFSKAGETAAVVNHMANRESVDLDINELFVVEYYSR 189


>gi|311901182|gb|ADQ13141.1| small ribosomal protein 4 [Nephrolepis cordifolia]
 gi|311901184|gb|ADQ13142.1| small ribosomal protein 4 [Nephrolepis cordifolia]
 gi|311901190|gb|ADQ13145.1| small ribosomal protein 4 [Nephrolepis exaltata]
          Length = 178

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 70  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PGKDKTPDHLTISLSEANKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|23477328|gb|AAN34640.1| ribosomal protein small subunit 4 [Woodwardia japonica]
          Length = 185

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I  + +     + L    
Sbjct: 77  VIFRLXMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LGGES 135

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++      D       RI          + +   LVVE+YSR
Sbjct: 136 PGGGETPDHLTASLSEGDRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183


>gi|165935729|gb|ABY75161.1| ribosomal protein S4 [Asplenium flaccidum]
 gi|165935733|gb|ABY75163.1| ribosomal protein S4 [Asplenium shuttleworthianum]
 gi|165968067|gb|ABY75859.1| ribosomal protein small subunit 4 [Asplenium difforme]
          Length = 188

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++   S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++              RI          + +   LVVE+YSR
Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|290467487|gb|ADD25861.1| small ribosomal protein 4 [Hymenophyllum tortuosum]
          Length = 187

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSSSKKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKTKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++     TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +S   +   + S+
Sbjct: 77  IVFQLGMSTTIPAARQLVNHRHILVNNNIVDIPSYRCKPKDLITLRNRSSSYSGSKKNSE 136

Query: 159 LAE-RDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  + +P++++ +             I          + +   LVVE+YSR
Sbjct: 137 FSRIKKIPDHLTFSFSEGNIPKGLVNGI---ANRESINLNINELLVVEYYSR 185


>gi|290467481|gb|ADD25858.1| small ribosomal protein 4 [Hymenophyllum rarum]
          Length = 187

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 77  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 136

Query: 159 LAER-DVPEYIS--VNHDNM-VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++   + DNM       I          + +   LVVE+YSR
Sbjct: 137 FSRRKKIPDHLTFSFSEDNMPKGLVNGI---ANRESIDLNINELLVVEYYSR 185


>gi|18028010|gb|AAL55929.1| ribosomal protein S4 [Jamesonia goudotii]
          Length = 190

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 23  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I  + +     ++ +   
Sbjct: 82  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +    VVEFYSR
Sbjct: 141 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 188


>gi|219973372|gb|ACL68572.1| ribosomal protein small subunit 4 [Marsilea minuta]
          Length = 184

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 9/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 14  QSTSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++    PTI AARQ VNHRH+LVN R V++ SYRC+  D I V+ +      +     
Sbjct: 73  IVFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDNITVRNRPTSYNVLKGGVF 132

Query: 159 LAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 133 ESSRSNEIPDHLSLSILEGNKPRGIVNQV---AKRESMDLNINELLIVEYYSR 182


>gi|156619652|gb|ABU88440.1| small ribosomal protein 4 [Aneura sp. Shaw 675]
 gi|156619654|gb|ABU88441.1| small ribosomal protein 4 [Aneura sp. Shaw 697]
 gi|156619668|gb|ABU88448.1| small ribosomal protein 4 [Aneura pinguis]
          Length = 172

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 6/168 (3%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 9   STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R   VPTI AARQ VNHRHV +N   ++I SY CK GDVI +  + K     + + Q
Sbjct: 68  TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNMNSLQ 127

Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  +P +++ +    V +  +I          + +   LVVE+YSR
Sbjct: 128 --KPAIPNHLTFDSKEFVGSVQQIIDRD---WIYLKINELLVVEYYSR 170


>gi|37992727|gb|AAR06542.1| small ribosomal protein 4 [Zelometeorium patulum]
          Length = 172

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 8   INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 66

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD I++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D + +K + K    + +
Sbjct: 67  LDNIIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFVTIKNQRKSETIISK 126

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
             +  ++  +P +++           +I   L      + +   LVVE+
Sbjct: 127 NIEFYQKYKIPNHLTYIFLEKKGLVNQI---LDRESIGLKINELLVVEY 172


>gi|45271070|gb|AAS56923.1| ribosomal protein small subunit 4 [Bolbitis heteroclita]
          Length = 191

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ V+HRH+LVN R V+I SYR K  D+   + +     +      
Sbjct: 83  VIFHLGMASTIPAARQLVSHRHILVNNRIVDIPSYRRKPRDITTTRNRPTSYNAPKGKFP 142

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             + +VP++++V     D +     RI          + +   LVVE+YSR
Sbjct: 143 GGD-NVPDHLAVSLSEGDRLTGLVNRI---ANRESVNLNINELLVVEYYSR 189


>gi|18028022|gb|AAL55935.1| ribosomal protein S4 [Eriosorus sp. Sanchez-Baracado 329]
          Length = 190

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 23  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I  + +     ++ +   
Sbjct: 82  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +    VVEFYSR
Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 188


>gi|165968065|gb|ABY75858.1| ribosomal protein small subunit 4 [Asplenium milnei]
 gi|165968069|gb|ABY75860.1| ribosomal protein small subunit 4 [Asplenium surrogatum]
          Length = 188

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++   S 
Sbjct: 80  VLFHLGMASTISAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++              RI          + +   LVVE+YSR
Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|227439317|gb|ACP31335.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           pinetorum]
          Length = 186

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L   LE RLD 
Sbjct: 19  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 78  VIFXLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P++++++            RI          + +   LVVE+YSR
Sbjct: 138 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 184


>gi|51458148|gb|AAU03423.1| ribosomal protein small subunit 4 [Asplenium hallbergii]
          Length = 189

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A  +RG T    +  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARGTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYR K  D I V+ ++    ++   S 
Sbjct: 81  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRRKPRDFITVRNRATSCNALRSKSP 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 141 VGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|156619656|gb|ABU88442.1| small ribosomal protein 4 [Aneura sp. Shaw 725]
 gi|156619658|gb|ABU88443.1| small ribosomal protein 4 [Aneura sp. Shaw 702]
          Length = 175

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 9   STSNKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157
            ++R   VPTI AARQ VNHRHV +N   ++I SY C+ GD+I +  + K       + +
Sbjct: 68  TIFRLGMVPTIPAARQLVNHRHVSINDHIIDIPSYNCRPGDIITINTREKFRLVNWRDMN 127

Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L + ++P +++ +    + +  +I          + +   LVVE+YSR
Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 173


>gi|18028026|gb|AAL55937.1| ribosomal protein S4 [Jamesonia bogotensis]
 gi|18028028|gb|AAL55938.1| ribosomal protein S4 [Jamesonia bogotensis]
          Length = 191

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +    VVEFYSR
Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESIDLEINELFVVEFYSR 189


>gi|51458172|gb|AAU03434.1| ribosomal protein small subunit 4 [Asplenium flaccidum]
          Length = 191

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 24  QSTSRKIXQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++   S 
Sbjct: 83  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 142

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++              RI          + +   LVVE+YSR
Sbjct: 143 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 189


>gi|110590036|gb|ABG77461.1| ribosomal protein small subunit 4 [Equisetum bogotense]
          Length = 178

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q  + K S + ++L AKQ+++  YG ++E++  +  + A  ++G T   L+  LE RLD 
Sbjct: 9   QSIQKKVSQYCIRLEAKQRLRFNYG-LTERQLLNYVRIARCAKGSTGQILLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R   VPTI +ARQ +NHRH+LVN R V++ S+ CK  D+I +       + + +  +
Sbjct: 68  ILFRLGVVPTIPSARQLINHRHILVNDRIVDVPSFHCKPKDIITIGAPKIYQSIITKRIE 127

Query: 159 -LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             A+  +P+++++              + +        + +   LVVE+YSR
Sbjct: 128 SFAKDQIPDHLTLSLSEPKKPKGFVNYLINR---ESIGLKINELLVVEYYSR 176


>gi|52788787|gb|AAU87374.1| ribosomal protein small subunit 4 [Azolla filiculoides]
 gi|157272421|gb|ABV27025.1| ribosomal protein small subunit 4-like protein [Azolla
           filiculoides]
          Length = 203

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        ++     +            K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKSLPGLAGEASNVGETRVAADQSTSTPKKISQFCVRLEAKQRLRYNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE RLD I++     PTI AARQ VNHRH+LVN R 
Sbjct: 60  RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHLGIAPTIPAARQPVNHRHILVNDRI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181
           V++ SYRCK  D+I ++ +   L  +             +P++++++            +
Sbjct: 120 VDVPSYRCKPKDIITIRNRPTSLNGLKRTGIFESSRGNQIPDHLTLSFSEDNRPKGLVNK 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
             +        + +    VVE+YSR
Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201


>gi|115350017|ref|YP_764373.1| ribosomal protein S4 [Stigeoclonium helveticum]
 gi|122165174|sp|Q06SJ3|RR4_STIHE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|98990231|gb|ABF60198.1| ribosomal protein S4 [Stigeoclonium helveticum]
          Length = 2922

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 19/185 (10%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVN-----------TRSYGPGLHGQRRKSKPS--- 46
           MS+    + +I RR+G       K P              +   PG HG+ +  K     
Sbjct: 1   MSRYLGPRLRITRRLGHLSGLTRKKPAFKPLNPVNPFGPRKIIPPGEHGRNKSFKKKPYE 60

Query: 47  ----YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
                + ++L+ KQ+++ +YG ++E++     ++A + +G T   L+  LE RLD IV+R
Sbjct: 61  SCEYDYLIRLKLKQRLRFHYG-LTERQLVRYVQQAKKIKGSTGRVLLRLLEMRLDNIVFR 119

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ ++H H+L+N + V I SY+C+  D+I V  K   +  V       +R
Sbjct: 120 LHMAPTIKAARQLISHGHILINKKKVTIPSYQCEPKDIITVAPKIISMELVSRFLSEFDR 179

Query: 163 DVPEY 167
           +   Y
Sbjct: 180 EKSRY 184


>gi|18027980|gb|AAL55914.1| ribosomal protein S4 [Eriosorus hispidulus]
          Length = 191

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I  + +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +    VVEFYSR
Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 189


>gi|52788801|gb|AAU87378.1| ribosomal protein small subunit 4 [Leptopteris hymenophylloides]
          Length = 186

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 17  QSASKKISQFCIRLEAKQRLRFNYGS-TERQLLRYVRIARKAKGSTGQVLLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV      PTI AARQ VNHRH+LVN   V+I SYRCK  D+  V+ ++     + +  +
Sbjct: 76  IVPELGMAPTIPAARQSVNHRHILVNDHIVDIPSYRCKPRDITTVRDRTSSYDRITKEIE 135

Query: 159 LAERD-VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++ + +P++++++            RI +        + +   LVVE+YSR
Sbjct: 136 SSQGEKIPDHLTLSLSGGNRPKGLVNRIVNRD---SIRLNINELLVVEYYSR 184


>gi|156619650|gb|ABU88439.1| small ribosomal protein 4 [Aneura sp. Shaw 657]
          Length = 175

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 9   STSNKKTSQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157
            ++R   VPTI AARQ VNHRHV +N   ++I SY C+ GD+I +  + K       + +
Sbjct: 68  TIFRLGMVPTIPAARQLVNHRHVSINDHIIDIPSYNCRPGDIITINTREKFRLVNWRDIN 127

Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L + ++P +++ +    + +  +I +        + +   LVVE+YSR
Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIINRD---WIYLKINELLVVEYYSR 173


>gi|18027974|gb|AAL55911.1| ribosomal protein S4 [Eriosorus flexuosus]
          Length = 189

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 22  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I  + +     ++ +   
Sbjct: 81  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 139

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +    VVEFYSR
Sbjct: 140 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 187


>gi|18027970|gb|AAL55909.1| ribosomal protein S4 [Eriosorus flexuosus]
          Length = 190

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 23  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 82  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +    VVEFYSR
Sbjct: 141 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 188


>gi|311901210|gb|ADQ13155.1| small ribosomal protein 4 [Nephrolepis undulata]
          Length = 177

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 10  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 69  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 127

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 128 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 175


>gi|290467485|gb|ADD25860.1| small ribosomal protein 4 [Hymenophyllum rugosum]
          Length = 186

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 17  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+ VN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 76  IVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 135

Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++ +             I          + +   LVVE+YSR
Sbjct: 136 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 184


>gi|219973324|gb|ACL68548.1| ribosomal protein small subunit 4 [Marsilea ancylopoda]
          Length = 170

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 9/172 (5%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S + ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD I
Sbjct: 1   STSKKISQYCVRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNI 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           V++    PTI AARQ VNHRH+LVN R V++ SYRC+  D+I V+ +      +      
Sbjct: 60  VFQLGLAPTIPAARQLVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSNNVLKGGVFE 119

Query: 160 AER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + R  ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 120 SSRSNEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 168


>gi|71679578|gb|AAZ38857.1| ribosomal protein small subunit 4 [Hymenophyllum flexuosum]
          Length = 183

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 14  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E  +
Sbjct: 73  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIE 132

Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++ +             I          + +   LVVE+YSR
Sbjct: 133 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 181


>gi|125662682|gb|ABN50291.1| small ribosomal protein 4 [Fokienia hodginsii]
          Length = 197

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I  R+        K+P   +   P      +  KPS + ++L+ KQ+++ +YG + E++ 
Sbjct: 1   IINRLKTLPGLSKKTP--NKIQKPFKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I
Sbjct: 58  LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSS 185
            SYRCK  D+I +K+K      + +   + ++D   VP +++             +I  +
Sbjct: 118 PSYRCKPRDLISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKIIDN 177

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
            +     + +   LVVE+YSR
Sbjct: 178 KR---IGLKINELLVVEYYSR 195


>gi|18027988|gb|AAL55918.1| ribosomal protein S4 [Eriosorus rufescens]
 gi|18027990|gb|AAL55919.1| ribosomal protein S4 [Eriosorus rufescens]
 gi|18027998|gb|AAL55923.1| ribosomal protein S4 [Eriosorus congestus]
 gi|18028000|gb|AAL55924.1| ribosomal protein S4 [Eriosorus novogranatensis]
 gi|18028002|gb|AAL55925.1| ribosomal protein S4 [Eriosorus novogranatensis]
 gi|18028006|gb|AAL55927.1| ribosomal protein S4 [Jamesonia goudotii]
 gi|18028008|gb|AAL55928.1| ribosomal protein S4 [Jamesonia goudotii]
 gi|18028012|gb|AAL55930.1| ribosomal protein S4 [Jamesonia peruviana]
 gi|18028014|gb|AAL55931.1| ribosomal protein S4 [Jamesonia peruviana]
 gi|18028016|gb|AAL55932.1| ribosomal protein S4 [Jamesonia peruviana]
          Length = 191

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I  + +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +    VVEFYSR
Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 189


>gi|311901208|gb|ADQ13154.1| small ribosomal protein 4 [Nephrolepis undulata]
          Length = 178

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 70  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|157272429|gb|ABV27029.1| ribosomal protein small subunit 4-like protein [Azolla rubra]
          Length = 203

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        ++     +            K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKSLPGLAGEASNVGETRVAADQSTSTPKKISQFCVRLEAKQRLRYNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T    +  LE RLD I++     PTI AARQ VNHRH+LVN R 
Sbjct: 60  RQLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHLGIAPTIPAARQPVNHRHILVNDRI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLE---ASQLAERDVPEYISVNHDN---MVATFVR 181
           V++ SYRCK  D+I ++ +   L  +             +P++++++            +
Sbjct: 120 VDVPSYRCKPKDIITIRNRPTSLNGLKRTGIIESSRGNQIPDHLTLSFSEDNRPKGLVNK 179

Query: 182 IPSSLKDVPYPVIMQPNLVVEFYSR 206
             +        + +    VVE+YSR
Sbjct: 180 TATR---ESIDLNINELSVVEYYSR 201


>gi|304322977|ref|YP_003795515.1| ribosomal protein S4 [Floydiella terrestris]
 gi|270048176|gb|ACZ58471.1| ribosomal protein S4 [Floydiella terrestris]
          Length = 3123

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 31/205 (15%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPV-----------NTRSYGPGLHGQRRKSKPS--- 46
           MS+    + +I RR+G  +    K P              +   PG HG+ +  K     
Sbjct: 29  MSRYLGPRLRITRRLGTLIGFTRKKPTMKPLYPENPFGLRKVIPPGQHGRAKLFKKKPYE 88

Query: 47  ----YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
                F ++L+ KQ+++ YYG I+EK+  +  + A +S+G T   L+  LE RLD IV+R
Sbjct: 89  SNEYDFLIRLKFKQRLRYYYG-ITEKQLFNYVELARKSKGSTGLVLLRLLEMRLDNIVFR 147

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ ++H H+LVN + V I S +CK  D+I    K + +  V    +    
Sbjct: 148 LHMAPTIAAARQLISHGHILVNKKKVTIPSAQCKPKDLITAAPKIRSMELVSRFLK---- 203

Query: 163 DVPEYISVNHDNMVATFVRIPSSLK 187
                   + +   A F RI + L+
Sbjct: 204 ------EFDMEK--ARFNRIVNILQ 220


>gi|18027968|gb|AAL55908.1| ribosomal protein S4 [Eriosorus flexuosus]
 gi|18027972|gb|AAL55910.1| ribosomal protein S4 [Eriosorus flexuosus]
 gi|18027976|gb|AAL55912.1| ribosomal protein S4 [Eriosorus cheilanthoides]
 gi|18027978|gb|AAL55913.1| ribosomal protein S4 [Eriosorus cheilanthoides]
 gi|18027982|gb|AAL55915.1| ribosomal protein S4 [Eriosorus hispidulus]
 gi|18027984|gb|AAL55916.1| ribosomal protein S4 [Eriosorus lindigii]
 gi|18027986|gb|AAL55917.1| ribosomal protein S4 [Jamesonia cuatrecasasii]
          Length = 191

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I  + +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +    VVEFYSR
Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 189


>gi|51458157|gb|AAU03427.1| ribosomal protein small subunit 4 [Asplenium yunnanense]
          Length = 194

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++  A+Q+ +  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 27  QSTSRKISQFCVRXEAQQRXRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 85

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++     
Sbjct: 86  VLFHLGIASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALGNKYL 145

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 146 LGDKT-PDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 192


>gi|290467469|gb|ADD25852.1| small ribosomal protein 4 [Hymenophyllum dimidiatum]
          Length = 187

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 13/192 (6%)

Query: 21  GRPKSPVNTR--SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           G     +N R     P     R+    S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   GLTNKKLNVREARIAPDQSSSRK---VSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 57  KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVI 194
           D+I V+ +    +   E    + R  +P++++ +             I            
Sbjct: 117 DLITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFN 173

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 174 INELLVVEYYSR 185


>gi|227439309|gb|ACP31331.1| ribosomal protein small subunit 4 [Pteridium esculentum]
          Length = 190

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++   G ++E++     + A ++RG T   L   LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNSG-LTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P+++++             RI          + +   LVVE+YSR
Sbjct: 142 LGEK-IPDHLTLSLSEGSKPTGLVNRI---ASRESVNLNINELLVVEYYSR 188


>gi|118724489|gb|ABL10818.1| ribosomal protein small subunit 4 [Cheilanthes tomentosa]
          Length = 197

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNM---VATFVRIPSSLK 187
           SYRCK  D+I ++ ++    +V  +       +VP++++++   M         +     
Sbjct: 120 SYRCKPKDIITIRNRTTSYNAVKVKGESFGRDEVPDHLTLSISKMSEPTGLVNHM---AN 176

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE++SR
Sbjct: 177 RESVNLDINELLVVEYHSR 195


>gi|18028004|gb|AAL55926.1| ribosomal protein S4 [Eriosorus longipetiolatus]
          Length = 186

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 19  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I  + +     ++ +   
Sbjct: 78  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +    VVEFYSR
Sbjct: 137 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 184


>gi|118724413|gb|ABL10780.1| ribosomal protein small subunit 4 [Pellaea longipilosa]
          Length = 195

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A  +RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARXTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +   +  L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-SKSLGRNEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|99639895|emb|CAJ45113.1| putative ribosomal protein S4 gene [Cyathea australis]
          Length = 196

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%)

Query: 11  IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
           + RR+        K+  P  TR        Q    K S F ++L AKQ+++  YG ++E+
Sbjct: 1   VIRRLKNLPGLTGKTSNPGETRIAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
             R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V
Sbjct: 56  LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIV 114

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISV---NHDNMVATFVRIP 183
           ++ SYRCK  D+I V+ +      +      + R   +P++++      +       RI 
Sbjct: 115 DVPSYRCKPKDIITVRNRPTSYNGLRSGINESSRGDQIPDHLTFSLLEGNRPKGLVNRI- 173

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 174 --ANRESIDLNINELLVVEYYSR 194


>gi|18027966|gb|AAL55907.1| ribosomal protein S4 [Eriosorus insignis]
          Length = 191

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +    VVEFYSR
Sbjct: 142 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 189


>gi|311901186|gb|ADQ13143.1| small ribosomal protein 4 [Nephrolepis davalliae]
          Length = 172

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 5   QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVLLQLLEMRLDN 63

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 64  VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 122

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 123 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 170


>gi|156619634|gb|ABU88431.1| small ribosomal protein 4 [Aneura mirabilis]
 gi|156619636|gb|ABU88432.1| small ribosomal protein 4 [Aneura mirabilis]
 gi|156619638|gb|ABU88433.1| small ribosomal protein 4 [Aneura mirabilis]
 gi|156619640|gb|ABU88434.1| small ribosomal protein 4 [Aneura mirabilis]
 gi|156619642|gb|ABU88435.1| small ribosomal protein 4 [Aneura mirabilis]
 gi|156619644|gb|ABU88436.1| small ribosomal protein 4 [Aneura mirabilis]
 gi|156619646|gb|ABU88437.1| small ribosomal protein 4 [Aneura mirabilis]
          Length = 175

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 9   STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R   VPTI AARQ VNHRHV +N   ++I SY CK GDVI +  + K          
Sbjct: 68  TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVDRRDMN 127

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++ ++P +++ +    + +  +I          + +   LVVE+YSR
Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIDLKINELLVVEYYSR 173


>gi|32401904|gb|AAP80940.1| small ribosomal protein 4 [Chamaecyparis obtusa]
          Length = 194

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 11/198 (5%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P   R   P      +  KPS + ++L+ KQ+++ +YG + E++    
Sbjct: 1   RLKTLPGLSKKTP--NRIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 58  VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKD 188
           RCK  D+I +K+K      + +   + ++D   VP +++             +I  + + 
Sbjct: 118 RCKPQDLISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKAQYSGLVKKIIDNKR- 176

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 177 --IGLKINELLVVEYYSR 192


>gi|311901170|gb|ADQ13135.1| small ribosomal protein 4 [Nephrolepis biserrata]
 gi|311901172|gb|ADQ13136.1| small ribosomal protein 4 [Nephrolepis biserrata]
 gi|311901174|gb|ADQ13137.1| small ribosomal protein 4 [Nephrolepis biserrata]
 gi|311901176|gb|ADQ13138.1| small ribosomal protein 4 [Nephrolepis biserrata]
 gi|311901178|gb|ADQ13139.1| small ribosomal protein 4 [Nephrolepis biserrata]
          Length = 178

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 70  VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  +P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PRKDKIPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|118724515|gb|ABL10831.1| ribosomal protein small subunit 4 [Llavea cordifolia]
          Length = 187

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 20  QSASKKIXQFCVRLEAKQRLRFNYG-LTERQLLKYVRVAKKTRGSTGQVLLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI AARQ V+HRH+LVN   V+I SYR K  D++ ++ +     +   +  
Sbjct: 79  IIFQLGMASTIPAARQLVSHRHILVNDHIVDIPSYRRKPKDILTIRNRPTSRNAAK-SES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   + P+++ ++             + +        + +   LVVE+YSR
Sbjct: 138 LGGNETPDHLILSLPKNGEPTGLVNHMVNR---ESVDLNINELLVVEYYSR 185


>gi|118724409|gb|ABL10778.1| ribosomal protein small subunit 4 [Pellaea doniana]
          Length = 195

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD ++++   V TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMVSTIPAARQLVNHRHILVNHRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRNEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 176 ESVNLDINELLVVEYYSR 193


>gi|149777722|gb|ABR28491.1| ribosomal protein small subunit 4-like protein [Asplenium
           hookerianum]
 gi|149777724|gb|ABR28492.1| ribosomal protein small subunit 4-like protein [Asplenium
           hookerianum]
 gi|149777726|gb|ABR28493.1| ribosomal protein small subunit 4-like protein [Asplenium
           hookerianum]
 gi|149777730|gb|ABR28495.1| ribosomal protein small subunit 4-like protein [Asplenium
           bulbiferum]
 gi|165935731|gb|ABY75162.1| ribosomal protein S4 [Asplenium hookerianum]
          Length = 188

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++     
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKYL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++              RI          + +   LVVE+YSR
Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|157689494|gb|ABV65303.1| ribosomal protein S4 [Hymenanthera alpina]
          Length = 169

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 12/171 (7%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQ+++ +YG I+E++  +  + A R++G T   L   LE RLD I++R 
Sbjct: 1   KKSQYRIRLEEKQRLRLHYG-ITERQLLTYVRIAARAKGSTGQVLRQLLEMRLDNILFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL---- 159
               TI  ARQ VNHRH+LVNGR V+I +YRCK  D+I VK K K  A +    +     
Sbjct: 60  GMASTIPRARQLVNHRHILVNGRIVDIPNYRCKPRDIITVKDKKKSRAMIQNYLKSLPRK 119

Query: 160 ----AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 + +P+++++N         +I  S         +   LVVE+YSR
Sbjct: 120 GLPNPRKGLPKHLTLNSVEYKGFVNQIIDSQ---WADFKINELLVVEYYSR 167


>gi|156619648|gb|ABU88438.1| small ribosomal protein 4 [Aneura sp. Shaw s.n.]
 gi|156619670|gb|ABU88449.1| small ribosomal protein 4 [Aneura pinguis]
 gi|156619672|gb|ABU88450.1| small ribosomal protein 4 [Aneura pinguis]
          Length = 175

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 9   STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157
            ++R   VPTI AARQ VNHRHV +N   ++I SY CK GDVI +  + K       + +
Sbjct: 68  TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNWRDMN 127

Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L + ++P +++ +    + +  +I          + +   LVVE+YSR
Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 173


>gi|99640035|emb|CAJ45144.1| putative ribosomal protein S4 gene [Metaxya lanosa]
          Length = 197

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 14/204 (6%)

Query: 8   KHKIDRRIGENLWGRPK--SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
           + K+ RR+        K  +P  TR        Q    K S F ++L AKQ+++  YG +
Sbjct: 1   RLKLIRRLKNLPGLTGKVSNPGETRVAVD----QSASKKISQFCVRLEAKQRLRFNYG-L 55

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E+  R   + A +++G T   L+  LE R D IV+ +    TI AARQ VNHRH++VN 
Sbjct: 56  TERLLR-YVRIARKTKGSTGQVLLQLLEMRSDNIVFHSGMASTIPAARQLVNHRHIVVND 114

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS---VNHDNMVATFVRI 182
           R V++ S+RCK  D+I V+ +                 +P++++   +  D       RI
Sbjct: 115 RIVDVPSHRCKPKDIITVRNRPSNKMKSGINDSSRGDKIPDHLTLSLLEGDWQKGLVNRI 174

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
                     + +   LVVE++SR
Sbjct: 175 ---ANRESIDLDINELLVVEYHSR 195


>gi|311901164|gb|ADQ13132.1| small ribosomal protein 4 [Nephrolepis abrupta]
 gi|311901166|gb|ADQ13133.1| small ribosomal protein 4 [Nephrolepis abrupta]
          Length = 178

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    ++ L    
Sbjct: 70  VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYSA-LRVKS 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|118724455|gb|ABL10801.1| ribosomal protein small subunit 4 [Cheilanthes arizonica]
          Length = 188

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVNGR V+I SYRCK  D++ ++ +     +      
Sbjct: 80  VIFQLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPKDILTIRNRLTSYNAAKVK-S 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   ++P++++++             +          + +   LVVE++SR
Sbjct: 139 LGRDEIPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|149777728|gb|ABR28494.1| ribosomal protein small subunit 4-like protein [Asplenium
           richardii]
          Length = 188

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSXSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++     
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKYL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++              RI          + +   LVVE+YSR
Sbjct: 140 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 186


>gi|17154631|emb|CAC83929.1| ribosomal protein S4 [Kabuyea hostifolia]
          Length = 174

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 9/182 (4%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPGLTSKRP----RSGNDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLRYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGRVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
           K  D+I  K K +  A +      +   ++P++++++         +I  S       + 
Sbjct: 116 KPRDIITTKDKERSKALIQNYIASSPPEELPKHLTIDSFQYKGLVNQIIDSK---WIGLK 172

Query: 195 MQ 196
           + 
Sbjct: 173 IN 174


>gi|78102685|gb|ABB21556.1| small ribosomal protein 4 [Plagiochila lunata]
          Length = 164

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 5/168 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISLNNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN 174
           V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNIHSFQKLKIPSHLTFDSTQ 164


>gi|118724513|gb|ABL10830.1| ribosomal protein small subunit 4 [Cryptogramma acrostichoides]
          Length = 188

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI AARQ VNHRH+LVN R V+I SYRCK  D++ ++ +     +      
Sbjct: 80  IIFQLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDILTIRNRPTSRNAAK-FES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   ++P+++ ++            ++          + +   LVVE+YSR
Sbjct: 139 LGGNEIPDHLILSLPKTGEPAGLVNQM---ANRESVDLNINELLVVEYYSR 186


>gi|290467475|gb|ADD25855.1| small ribosomal protein 4 [Hymenophyllum multifidum]
          Length = 187

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 77  IVFQSGMSATIPAARQLVNHRHILVNNNIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 136

Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++ +             I          + +   LVVE+YSR
Sbjct: 137 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 185


>gi|51458075|gb|AAU03391.1| ribosomal protein small subunit 4 [Hymenasplenium cheilosorum]
          Length = 189

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 22  QSNLRKISQFCIRLEAKQRLRLNYG-LTERQLLRYVRIARKTRGSTGQVLLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN   V+I SYR K  D+I  + +     + L+   
Sbjct: 81  VLFRLGMASTIPAARQLVNHRHILVNNCIVDIPSYRRKPKDIITARNRPTSWNA-LKGES 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   + P++++V     D        +          + +    VVE+YSR
Sbjct: 140 IGGDETPDHLTVSLSEGDRPTGLVNHV---ANRESVNLNINELSVVEYYSR 187


>gi|118724317|gb|ABL10732.1| ribosomal protein small subunit 4 [Pellaea atropurpurea]
          Length = 195

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+  +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKANASNLGEFRVAVDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  NYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNHRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYRCK  D+I ++ +     + L+       +VP++++++             +      
Sbjct: 120 SYRCKPKDIITIRNRPTSYNA-LKVESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|99639949|emb|CAJ45126.1| putative ribosomal protein S4 gene [Cibotium barometz]
          Length = 187

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 14/193 (7%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P  TR        Q    K S F ++L AKQ+++  YG ++E+  R   + A 
Sbjct: 2   LTGKASNPGETRVAAD----QSTSRKISQFCVRLEAKQRLRFNYG-LTERLLR-YVRIAR 55

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T    +  LE RLD I++ +    TI AARQ VNHRH++VN R V++ SYRCK  
Sbjct: 56  KTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHIVVNDRIVDVPSYRCKPK 115

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +      +      + R  ++P++++   +  +       RI          +
Sbjct: 116 DIITVRNRPTSSNVLRSGINESSRGDEIPDHLTLSLLEGNRPKGLVNRI---ANRESIDL 172

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 173 NINELLVVEYYSR 185


>gi|32879549|emb|CAE11885.1| ribosomal protein S4 [Cyanixia socotrana]
          Length = 174

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
                  K P +    G  L  Q R  K S + ++L  KQK++ +YG ++E++       
Sbjct: 1   ALPGLTSKRPGS----GSDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVHI 55

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK
Sbjct: 56  AGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCK 115

Query: 137 EGDVIEVKQKSKQLASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
             D+I  K K +  A +      +    ++P +++++         +I  S       + 
Sbjct: 116 PRDIITTKNKQRSKALIQNFISSSPHLEELPNHLTIDPFQYKGLVNQIIDSK---WIGLK 172

Query: 195 MQ 196
           + 
Sbjct: 173 IN 174


>gi|290467491|gb|ADD25863.1| small ribosomal protein 4 [Hymenophyllum tunbrigense]
 gi|290467493|gb|ADD25864.1| small ribosomal protein 4 [Hymenophyllum tunbrigense]
          Length = 187

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
           G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A ++
Sbjct: 1   GLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKA 58

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD IV+++    TI AARQ VNHRH+ VN   V+I SYRCK  D+
Sbjct: 59  KGSTGQILLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHIWVNNHIVDIPSYRCKPKDL 118

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQ 196
           I V+ +    +   E    + R  +P++++ +             I          + + 
Sbjct: 119 ITVRNRPSSYSGSKENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNIN 175

Query: 197 PNLVVEFYSR 206
             LVVE+YSR
Sbjct: 176 ELLVVEYYSR 185


>gi|59803301|gb|AAX07759.1| Rps4 [Jubula hutchinsiae subsp. javanica]
          Length = 172

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 5/171 (2%)

Query: 6   SSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI 65
             + KI RR+G       ++     +Y   +       K S + ++L  KQK++ +YG +
Sbjct: 6   GPRVKIIRRLGSXPGLTGRASKPKSTY---IDRSTSNKKISQYRIRLEEKQKLRFHYG-L 61

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
           +E++     + A +++G T   L+  LE RLD  ++     PTI +ARQ VNHRH+ +N 
Sbjct: 62  TERQLLKYVRIARKTKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPSARQLVNHRHIFINN 121

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
            +VN+ SY C+ GD+I +K K K      +     ++ ++P ++  N   +
Sbjct: 122 YTVNVPSYNCEPGDIITIKNKXKSQLIXTKNINSXQKLEIPNHLIFNSIKL 172


>gi|305672379|gb|ADM63613.1| ribosomal protein S4 [Campanula trachelium]
          Length = 171

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 9/177 (5%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       +SP + R             K S +  +L  KQK++ +YG ++E++
Sbjct: 1   KKIRRLGTLPGLTTRSPDDLRKE-------SSSGKKSLYCSRLEEKQKLRFHYG-LTERQ 52

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A R++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+
Sbjct: 53  LLKYVRLAARAKGPTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRLVD 112

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRIPSS 185
           I SYRCK  D I  K K    A +  +   L ++ +P ++++          +I  S
Sbjct: 113 IPSYRCKPRDTITAKDKQTSKALIQNSLDSLPQKKLPPHLTLKRRQYKGLVNKIIDS 169


>gi|86211249|gb|ABC87297.1| small ribosomal protein 4 [Hymenophyllum dimidiatum]
          Length = 182

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 13  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 72  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 131

Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++ +             I            +   LVVE+YSR
Sbjct: 132 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFNINELLVVEYYSR 180


>gi|156619662|gb|ABU88445.1| small ribosomal protein 4 [Aneura sp. Wickett 468]
          Length = 175

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 9   STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157
            ++R   VPTI AARQ VNHRHV +N   ++I SY CK GDVI +  + K       + +
Sbjct: 68  TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNWRDMN 127

Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L + ++P +++ +      +  +I          + +   LVVE+YSR
Sbjct: 128 SLQKPEIPNHLTFDSKEFFGSVQQIIDRD---WIYLKINELLVVEYYSR 173


>gi|118724339|gb|ABL10743.1| ribosomal protein small subunit 4 [Pellaea falcata]
          Length = 184

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 17  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVLLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D++ ++ +     +V     
Sbjct: 76  VIFKLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDILTIRNRPTSYNAVKV-ES 134

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE+YSR
Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYYSR 182


>gi|118724497|gb|ABL10822.1| ribosomal protein small subunit 4 [Mildella intramarginalis]
          Length = 195

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          +  Q   +K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEIRVVGDQPASNKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD ++++     TI AARQ VNHRH+LVNGR V+I 
Sbjct: 60  NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNGRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|18028024|gb|AAL55936.1| ribosomal protein S4 [Eriosorus hirsutulus]
          Length = 178

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 11  QSISKKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRC   D+I  + +     ++ +   
Sbjct: 70  ILFRLGMASTIPAARQLVNHRHILVNKRIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 128

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++            R+          + +    VVEFYSR
Sbjct: 129 IGRDGIPDHLTLSLSKDGEPAGLVNRM---ASRESVDLEINELFVVEFYSR 176


>gi|51458166|gb|AAU03431.1| ribosomal protein small subunit 4 [Asplenium lucidum]
          Length = 193

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 26  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 84

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++ + S 
Sbjct: 85  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRKKSL 144

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++               I          + +   LVVE+YSR
Sbjct: 145 VGDKT-PNHLTFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 191


>gi|156619660|gb|ABU88444.1| small ribosomal protein 4 [Aneura sp. Shaw 670]
          Length = 175

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD 
Sbjct: 9   STSSKKISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDN 67

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV-LEAS 157
            ++R   VPTI AARQ VNHRHV +N   ++I SY CK GDVI +  + K       + +
Sbjct: 68  TIFRLGIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLENWRDMN 127

Query: 158 QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            L + ++P +++ +    + +  +I          + +   LVVE+YSR
Sbjct: 128 SLQKPEIPNHLTFDSKEFLGSVQQIIDRD---WIYLKINELLVVEYYSR 173


>gi|311901168|gb|ADQ13134.1| small ribosomal protein 4 [Nephrolepis acutifolia]
 gi|311901180|gb|ADQ13140.1| small ribosomal protein 4 [Nephrolepis brownii]
 gi|311901188|gb|ADQ13144.1| small ribosomal protein 4 [Nephrolepis davallioides]
 gi|311901192|gb|ADQ13146.1| small ribosomal protein 4 [Nephrolepis falcata]
          Length = 178

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 70  VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PRKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|32401902|gb|AAP80939.1| small ribosomal protein 4 [Hesperocyparis macrocarpa]
          Length = 190

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 10/193 (5%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A 
Sbjct: 1   LPGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  
Sbjct: 59  RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPV 193
           D+I +K+K      V +  ++ ++D   VP +++             +I  + +     +
Sbjct: 119 DLISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 KINELLVVEYYSR 188


>gi|311901204|gb|ADQ13152.1| small ribosomal protein 4 [Nephrolepis radicans]
          Length = 178

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 70  VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PRKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|290467471|gb|ADD25853.1| small ribosomal protein 4 [Hymenophyllum feejeense]
          Length = 179

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 10  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 69  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 128

Query: 159 LAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++      +        I          + +   LVVE+YSR
Sbjct: 129 FSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 177


>gi|51458170|gb|AAU03433.1| ribosomal protein small subunit 4 [Asplenium richardii]
          Length = 189

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI  ARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++     
Sbjct: 81  VLFHLGMASTIPXARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKYL 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++              RI          + +   LVVE+YSR
Sbjct: 141 VGDKT-PNHLTFALSEGGRPTGLVNRI---ANRESINLNINELLVVEYYSR 187


>gi|311901198|gb|ADQ13149.1| small ribosomal protein 4 [Nephrolepis lauterbachii]
          Length = 178

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QLASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 70  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNA-LRAKF 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PGKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|311901196|gb|ADQ13148.1| small ribosomal protein 4 [Nephrolepis hirsutula]
          Length = 178

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     + L A  
Sbjct: 70  VIFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSY-NALRAKS 128

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +   P+++++     +        I          + +   LVVE+YSR
Sbjct: 129 PRKDKTPDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|118724417|gb|ABL10782.1| ribosomal protein small subunit 4 [Pellaea pectiniformis]
          Length = 192

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 25  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 84  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSCNAAK-GKS 142

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE+YSR
Sbjct: 143 LGRNEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYYSR 190


>gi|156619664|gb|ABU88446.1| small ribosomal protein 4 [Aneura sp. Wickett 472]
 gi|156619666|gb|ABU88447.1| small ribosomal protein 4 [Aneura sp. Wickett 473]
          Length = 172

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++       A  ++G T   L+  LE RLD  ++R 
Sbjct: 14  KISQYRIRLEEKQKLRLHYG-LTERQLLKYVFTARGAKGSTGQLLLQLLEMRLDNTIFRL 72

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
             VPTI AARQ VNHRHV +N   ++I SY CK GDVI +  + K     + + Q  +  
Sbjct: 73  GIVPTIPAARQLVNHRHVSINEHIIDIPSYNCKPGDVITINNREKCRLVNMNSLQ--KPA 130

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P +++ +    V +  +I          + +   LVVE+YSR
Sbjct: 131 IPNHLTFDSKEFVGSVQQIIDRD---WIYLKINELLVVEYYSR 170


>gi|170516215|gb|ACB15109.1| small ribosomal protein 4 [Callitris preissii]
          Length = 195

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+        K+P   R+  P L    +  KPS +  +L+ KQK++ +YG +SE
Sbjct: 1   RLKIINRLKTLPGLSKKTP--KRNEQPFLKKHFKPLKPSKYLERLKEKQKLRFHYG-LSE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 58  RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV--ATFVRIPSS 185
           V+I SYRCK  D I +K   KQ   + +  +     VP ++      +       +I  +
Sbjct: 118 VDIPSYRCKPQDFISIKD--KQGLRINKNIKEKITRVPPHLKRIKKKLQYXGLVQKIIDN 175

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + M   LVV +YSR
Sbjct: 176 Q---SIGLKMNELLVVGYYSR 193


>gi|227439429|gb|ACP31391.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
          Length = 190

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  Y  ++E++     + A ++RG T   L   LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNY-RLTERQPLKYVRIARKTRGSTGQVLPQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 82  VIFHLGMASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESL 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L E+ +P++++++            RI          + +   LVVE+YSR
Sbjct: 142 LGEK-IPDHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 188


>gi|78102637|gb|ABB21532.1| small ribosomal protein 4 [Plagiochila crozetensis]
          Length = 165

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIPRLGVLPGFTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           V+I SY C+ GD+I ++ K K  + + +     ++  +P +++ +   +
Sbjct: 117 VDIPSYNCEPGDIITIRNKQKSQSIITKNINSFQKLKIPSHLTFDSTQL 165


>gi|18028018|gb|AAL55933.1| ribosomal protein S4 [Jamesonia verticalis]
          Length = 191

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I ++ +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITIRNRP-IFHNMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +    VVEFYSR
Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVVEFYSR 189


>gi|212004225|gb|ACJ15421.1| Rps4 [Argyrochosma incana]
          Length = 187

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V  +  
Sbjct: 79  IIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVK-SES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE++SR
Sbjct: 138 LGRDEVPDHLTLSISKTSEPTGLVNNM---ANRESVNLDINELLVVEYHSR 185


>gi|307602401|gb|ADN68082.1| ribosomal protein S4 [Thuja standishii]
          Length = 189

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQK++ +YG + E++     + A R
Sbjct: 1   PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQKLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVI 194
           +I +K+K   +  + +   ++E+D   VP +++         A   +I  + +     + 
Sbjct: 119 LISIKEKQGLINKINQNIFISEQDQMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|78102621|gb|ABB21524.1| small ribosomal protein 4 [Acrochila biserialis]
          Length = 174

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 8/181 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
                K+  +  SY   +       K S + ++L  KQK + +YG ++E++     + A 
Sbjct: 1   PGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKXRFHYG-LTERQLLKYMRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L   LE RLD  ++R    PTI  ARQ VNHRH+ +N   V+I SY C+ G
Sbjct: 57  KAKGSTGQVLXQLLEMRLDNTIFRLGMSPTIPGARQLVNHRHISINNNIVDIPSYNCEPG 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           ++I +K K K  + + +     +   +P +++ +   +  +  ++ +        + +  
Sbjct: 117 NIITIKNKQKSQSIITKNINSFQNLKIPSHLTFDSIQLRGSVNQMINR---EWINLKINE 173

Query: 198 N 198
            
Sbjct: 174 L 174


>gi|118724499|gb|ABL10823.1| ribosomal protein small subunit 4 [Aleuritopteris farinosa]
          Length = 194

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 8/197 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K+ V+       +  Q    K S F ++L AKQ+++  YG ++E++  +
Sbjct: 1   RRLKNLPGLAGKNNVSNLEEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLN 59

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R+RG T   L+  LE RLD ++++     TI AARQ V+HRH+LVN   V+I S
Sbjct: 60  YVRIARRTRGSTGQVLLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRHIVDIPS 119

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM---VATFVRIPSSLKDV 189
           YRCK  D+I ++ +     +      L   +VP++++++             +       
Sbjct: 120 YRCKPKDIITIRNRPTSYNAAK-GKSLGRDEVPDHLTLSISKTNESTGLVNHM---ANRE 175

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE++SR
Sbjct: 176 SVNLDINELLVVEYHSR 192


>gi|86438906|emb|CAJ55426.1| small ribosomal protein 4 [Plagiochila obovata]
          Length = 163

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+ FLE RLD 
Sbjct: 7   STSNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQFLEMRLDN 65

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R    PTI  ARQ VNHRH+ +N   V+I SY C+ GD+I ++ K K  +++++   
Sbjct: 66  TIFRLGMSPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIRDKQKSQSAIIKNIN 125

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
             ++  +P +++ +   +  +  ++ +        + +   
Sbjct: 126 SFQKVKIPSHLTFDSTQLRGSVNQMINR---EWINLKINEL 163


>gi|78102687|gb|ABB21557.1| small ribosomal protein 4 [Plagiochila lyallii]
          Length = 165

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIVRRLGSLPGLTSKTLKSKSSY---IDRSTLNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDM 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNM 175
           V+I SY C+ GD+I ++ K K  + V +     ++  +P +++ +   +
Sbjct: 117 VDIPSYNCEPGDIIAIRNKEKSQSIVTKNMNSFQKLKIPSHLTFDSTQL 165


>gi|190361243|gb|ACE76926.1| ribosomal protein small subunit 4 [Trichomanes elegans]
          Length = 153

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 18/166 (10%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S FG++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD IV+R 
Sbjct: 1   KVSQFGVRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
              PTI AARQ VNHRHVLVN   V+I SYRCK  D+I ++           + +   + 
Sbjct: 60  GMAPTIPAARQLVNHRHVLVNNHMVDIPSYRCKHKDLITLR-----------SQESFRKR 108

Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P++++ +      +      I +        + +   LVVE+YSR
Sbjct: 109 IPDHLTFSSSEGNSLKGLVNGIANRD---SIDLNINELLVVEYYSR 151


>gi|118724465|gb|ABL10806.1| ribosomal protein small subunit 4 [Cheilanthes eatonii]
          Length = 194

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 25  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL-EAS 157
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ ++    +V  +  
Sbjct: 84  VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVKVKGE 143

Query: 158 QLAERDVPEYISVNHDNM---VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +VP++++++   M         +          + +   LVVE++SR
Sbjct: 144 SFGRDEVPDHLTLSISKMSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 192


>gi|311901162|gb|ADQ13131.1| small ribosomal protein 4 [Lomariopsis pollicina]
          Length = 178

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++   S 
Sbjct: 70  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSYNALRVKSP 129

Query: 159 LAERDVPEYIS--VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P++++  ++ DN  A  V            + +   LVVE+YSR
Sbjct: 130 AGDKT-PDHLTISLSEDNKPAGLVNCI--ANRESVNLNINELLVVEYYSR 176


>gi|108773080|ref|YP_635989.1| ribosomal protein S4 [Scenedesmus obliquus]
 gi|122179524|sp|Q1KVT5|RR4_SCEOB RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|88696646|gb|ABD48272.1| ribosomal protein S4 [Scenedesmus obliquus]
          Length = 251

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRKS------- 43
           MS+    + +I RRIG+      K P             +   PG HG  +         
Sbjct: 1   MSRYIGPRLRIIRRIGKLRGFTRKKPFRRSFRGRGALQGKVIPPGQHGLTKLFKSRPFDS 60

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
             S + ++L+ KQ+++  YG I+EK+     ++A + +  T   L+  LE RLD IV+R 
Sbjct: 61  NESDYLIRLKVKQRLRYNYG-ITEKQLVKYVRQAKKMKESTGQVLLQLLEMRLDNIVFRL 119

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
              PTI AARQ ++H H+ VN + VNI SY CK  DVI V  K   L  V    Q   + 
Sbjct: 120 NMAPTICAARQLISHGHIHVNSKKVNIASYMCKPKDVISVSMKQSSLKLVNRNLQEYSQK 179

Query: 164 VPEY 167
           +  Y
Sbjct: 180 MSAY 183



 Score = 34.9 bits (79), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%)

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
            +     +            LE  L  ++++    P +  A +++N   V VN R V + 
Sbjct: 167 KLVNRNLQEYSQKMSAYKKRLERTLAYVLFQRNISPNMANALEYINQGKVQVNNRKVLLP 226

Query: 132 SYRCKEGDVIEVKQKS 147
           +Y C   D+I VK   
Sbjct: 227 NYLCHSKDMISVKTDK 242


>gi|311901194|gb|ADQ13147.1| small ribosomal protein 4 [Nephrolepis falciformis]
          Length = 178

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 11  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +V+      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S 
Sbjct: 70  VVFHLGLASTIPAARQLVNHRHILVNNCIVDIPSYRCKPRDIITVRNRPTSYNALRTKSP 129

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P+++++     +        I          + +   LVVE+YSR
Sbjct: 130 RKDKT-PDHLTISLSEGNKPTGLVNSI---ANRESVNLNINELLVVEYYSR 176


>gi|42556422|gb|AAS19806.1| small ribosomal protein 4 [Herbertus dicranus]
          Length = 137

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD  ++R     TI  ARQ VNHRH+ +N   V+I 
Sbjct: 2   KYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMASTIPGARQLVNHRHISINNDIVDIP 61

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMVATFVRIPSSLKDV 189
           SY C+ GD+I +K K K  + + +   L +  + +P +++ +   +  +  +  +     
Sbjct: 62  SYNCEPGDIITIKNKQKSQSIITKNISLFQKLKKIPSHLTFDSIKLHGSINQTINR---E 118

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE+YSR
Sbjct: 119 SINLKINELLVVEYYSR 135


>gi|16930539|gb|AAL31952.1| ribosomal protein small subunit 4 [Athyrium filix-femina]
          Length = 162

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 8/164 (4%)

Query: 46  SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105
           S F ++L AKQ+++  YG ++E++     + A  +RG T    +  LE RLD +++    
Sbjct: 2   SQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARGTRGSTGQVPLQLLEMRLDNVIFNLGM 60

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP 165
             TI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ +     + L+    A   +P
Sbjct: 61  ASTIPAARQLVNHRHILVNNRIVDIPSYRCKPKDIITVRNRPTSCNA-LKGESPAGDKIP 119

Query: 166 EYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++++ +            R+          + +   LVVE+YSR
Sbjct: 120 DHLTASLSEGNRPTGLVNRV---ANRESVNLNINELLVVEYYSR 160


>gi|219973344|gb|ACL68558.1| ribosomal protein small subunit 4 [Marsilea macropoda]
          Length = 169

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 9/168 (5%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S +  +L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD IV++ 
Sbjct: 4   KISQYCGRLEAKQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQL 62

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI AARQ VNH H+LVN R V++ SYRC+  D+I V+ +      +      + R 
Sbjct: 63  GLAPTIPAARQLVNHXHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRS 122

Query: 163 -DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++P+++S   +  +       ++    K     + +   L+VE+YSR
Sbjct: 123 NEIPDHLSLSILEGNKPRGVVNQV---AKRESMDLNINELLIVEYYSR 167


>gi|118724425|gb|ABL10786.1| ribosomal protein small subunit 4 [Argyrochosma nivea]
          Length = 195

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLKEFRVAGDQSVSKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V +   L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKD-ESLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|208751323|gb|ACI31274.1| ribosomal protein S4 [Volvox carteri]
 gi|261888171|gb|ACY06026.1| ribosomal protein S4 [Volvox carteri f. nagariensis]
          Length = 260

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 18/175 (10%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRK-------S 43
           MS+    + ++ RRIG+      K P             +   PG HG  +        S
Sbjct: 1   MSRYLGPRLRVIRRIGKLRGFTRKKPFRRVFRGFGRSKGKVIPPGQHGLTKLLKTRPYDS 60

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
             S + ++L+ KQ+++  YG I+E++  +  ++A + +  T   L+ FLE RLD IV+R 
Sbjct: 61  SESDYLIRLKVKQRLRFNYG-ITERQLVNYVRKAKKIKESTGQVLLQFLEMRLDNIVFRL 119

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
              PTI AARQ ++H H+ VN + VNI SY CK  DVI V  K   L  V +  +
Sbjct: 120 NMAPTIPAARQLISHGHIRVNNKKVNIPSYMCKPKDVISVAMKQSSLKLVNKNLE 174


>gi|118724411|gb|ABL10779.1| ribosomal protein small subunit 4 [Pellaea dura]
          Length = 181

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 14  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 73  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 131

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE+YSR
Sbjct: 132 LGRNEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYYSR 179


>gi|37548871|gb|AAO32704.1| ribosomal protein 4 [Pogonatum subulatum]
          Length = 137

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
             +  + A +++G T   L+  LE RLD I++R    PTI  ARQ VNH+H+LVN   VN
Sbjct: 1   LLNYVRIARKAKGSTGQILLQLLEMRLDNIIFRLGMAPTIPGARQLVNHKHILVNDHIVN 60

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKD 188
           I SYRCK  D I +K + +  A + +     ++  +P +++ N         +I   L  
Sbjct: 61  IPSYRCKPQDFITIKNRQESQAIITKNIDFFQKYKIPNHLTFNSLEKKGLVNQI---LDR 117

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 118 ESIGLKINELLVVEYYSR 135


>gi|51458153|gb|AAU03425.1| ribosomal protein small subunit 4 [Asplenium laciniatum]
          Length = 189

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A  +RG T    +  LE RLD 
Sbjct: 22  QSTSRKISQFCVRLZAKQRLRFNYG-LTERQLLRYVRIARITRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++     PTI AARQ VNHRH+LVN   V+I SYR K  D I V+ +     + L    
Sbjct: 81  VLFHLGIAPTIPAARQLVNHRHILVNNFIVDIPSYRRKPKDSITVRNRPTSCNA-LGNKS 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++V     D       R+          + +   LVVE+YSR
Sbjct: 140 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVVEYYSR 187


>gi|290467483|gb|ADD25859.1| small ribosomal protein 4 [Hymenophyllum revolutum]
          Length = 187

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 77  IVFQSGISATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSKENIG 136

Query: 159 LAER-DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++      +        I          + +   LVVE+YSR
Sbjct: 137 FSRRKKIPDHLTFFFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 185


>gi|281332611|gb|ADA60892.1| ribosomal protein S4 [Neocheiropteris ensata]
          Length = 188

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 21  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     +      
Sbjct: 80  VIFHLGLASTVPAARQLVNHRHILVNSCVVDIPSYRCKPKDIITVRNRPTSYNASRNKFT 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P+++++     D        I          + +   LVVE+YSR
Sbjct: 140 GGDKT-PDHLAISLSEDDKPTGLVNCI---ANRESVNLNINELLVVEYYSR 186


>gi|78102659|gb|ABB21543.1| small ribosomal protein 4 [Plagiochila flabelliflora]
          Length = 162

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 5/166 (3%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGALPGLTSKTLKSKSSY---IDRSTPNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE R D  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRXARKAKGSTGQVLLQLLEMRPDNTIFRLGMSPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           V+I SY C+ GD+I +  K K  + V +     ++  +P +++ + 
Sbjct: 117 VDIPSYNCEPGDIITIGNKQKSRSIVTKNINSFQKLKIPSHLTFDS 162


>gi|125662704|gb|ABN50302.1| small ribosomal protein 4 [Glyptostrobus pensilis]
          Length = 197

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I  R+        K+P   R+  P      +  KPS + ++L+ KQ+++ +YG ++E++ 
Sbjct: 1   IINRLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I
Sbjct: 58  LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSS 185
            SYRCK  D I +K K +    +     + ++D   VP +++             +I  +
Sbjct: 118 PSYRCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDN 177

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
            +     + +   LVVE+YSR
Sbjct: 178 NR---IGLKINELLVVEYYSR 195


>gi|165968075|gb|ABY75863.1| ribosomal protein small subunit 4 [Asplenium shuttleworthianum]
          Length = 188

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++   S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P++++               I          + +   LVVE+YSR
Sbjct: 140 VGDKT-PDHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 186


>gi|118724329|gb|ABL10738.1| ribosomal protein small subunit 4 [Pellaea bridgesii]
 gi|118724331|gb|ABL10739.1| ribosomal protein small subunit 4 [Pellaea bridgesii]
 gi|118724333|gb|ABL10740.1| ribosomal protein small subunit 4 [Pellaea bridgesii]
 gi|118724335|gb|ABL10741.1| ribosomal protein small subunit 4 [Pellaea bridgesii]
 gi|118724391|gb|ABL10769.1| ribosomal protein small subunit 4 [Pellaea x glaciogena]
          Length = 195

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLKEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNHRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724467|gb|ABL10807.1| ribosomal protein small subunit 4 [Cheilanthes eatonii]
          Length = 195

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K   +          Q    K S F ++L AKQ+++  YG ++E++    
Sbjct: 1   RLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKY 59

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I SY
Sbjct: 60  VRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSY 119

Query: 134 RCKEGDVIEVKQKSKQLASVL-EASQLAERDVPEYISVNHDNM---VATFVRIPSSLKDV 189
           RCK  D+I ++ ++    +V  +       +VP++++++   M         +       
Sbjct: 120 RCKPKDIITIRNRTTSYNAVKVKGESFGRDEVPDHLTLSISKMSEPTGLVNHM---ANRE 176

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE++SR
Sbjct: 177 SVNLDINELLVVEYHSR 193


>gi|125662678|gb|ABN50289.1| small ribosomal protein 4 [Platycladus orientalis]
          Length = 196

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
             R+        K+P   R   P      +  KPS + ++L+ KQ+++ +YG + E++  
Sbjct: 1   ISRLKTLPGLSKKTP--NRIKKPIKKKHFKPIKPSKYPVRLKEKQRLRFHYG-LPERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I 
Sbjct: 58  QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSL 186
           SYRCK  D+I +K+K      + +   + ++D   VP +++             +I  + 
Sbjct: 118 SYRCKPQDLISIKEKEGSKNRIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNK 177

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           +     + +   LVVE+YSR
Sbjct: 178 R---IGLKINELLVVEYYSR 194


>gi|156619317|gb|ABU88338.1| ribosomal protein S4 [Chlamydomonas moewusii]
          Length = 269

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 18/174 (10%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSY----------GPGLHGQRRKSKPS---- 46
           M++    + +I RRIG+      K P+  +             PG HG  +  K      
Sbjct: 15  MARYTGPRLRIIRRIGKLRGFTRKKPIRRKCTNKGYLNGRVIPPGQHGLVKLMKTRPYDS 74

Query: 47  ---YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
               + ++L+ KQ+++  YG +SE++  +  ++A + +  T   L+  LE R D IV+R 
Sbjct: 75  SQSDYLIRLKVKQRLRFNYG-LSERQLVNYIRKAKKIKEATGQVLLQLLEMRFDNIVFRL 133

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
              PTI AARQ + H H+ VN + VNI SY CK  DVI V  K   L  V +  
Sbjct: 134 NMAPTIGAARQLITHGHIRVNNKKVNIPSYMCKPKDVISVAMKKTSLKLVNKNL 187


>gi|307602219|gb|ADN67991.1| ribosomal protein S4 [Calocedrus decurrens]
 gi|307602221|gb|ADN67992.1| ribosomal protein S4 [Calocedrus macrolepis]
          Length = 189

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGVVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|32401866|gb|AAP80921.1| small ribosomal protein 4 [Cephalotaxus drupacea]
          Length = 191

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 9/193 (4%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N +          +    S + ++L+ KQ+++  YG ++E++     + A 
Sbjct: 1   LPGLSKKKPNRKWGATCQKKHYKPINSSKYPVRLKEKQRVRFNYG-LTERQLLQYVRIAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G TS  L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 60  RAKGSTSQVLLQLLEMRLDNIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSYRCKPQ 119

Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193
           D+I +K + +    + +   L++++   VP ++++       V    +I  + +     +
Sbjct: 120 DLISIKDQQRSRNIINKNINLSQKNKMRVPFHLNLLKKKSQYVGLVKKIIDNKR---ISL 176

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE++SR
Sbjct: 177 KINELLVVEYFSR 189


>gi|212004155|gb|ACJ15386.1| Rps4 [Pellaea atropurpurea]
          Length = 187

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ +     + L+   
Sbjct: 79  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|42794656|gb|AAS45725.1| Rps4 [Disterigma trimerum]
          Length = 211

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 11/168 (6%)

Query: 46  SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105
           S + ++L+ KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R   
Sbjct: 44  SQYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM 102

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD 163
             TI  ARQ V HRHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R 
Sbjct: 103 ASTIPGARQLVXHRHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRK 162

Query: 164 -----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VP ++++N         +I ++       + ++  LVVE+YSR
Sbjct: 163 QKRKRVPYHLTLNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|18027996|gb|AAL55922.1| ribosomal protein S4 [Eriosorus hirtus]
          Length = 189

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 22  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+ VN   V+I SYRC   D+I  + +     ++ +   
Sbjct: 81  ILFRLGMASTIPAARQLVNHRHIXVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 139

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             + S        + +    V EFYSR
Sbjct: 140 IGRDGIPDHLTLSVSKDGEPSGLVNSMVSR---ESVDLEINELFVAEFYSR 187


>gi|118724367|gb|ABL10757.1| ribosomal protein small subunit 4 [Pellaea notabilis]
          Length = 195

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAVDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  NYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYRCK  D+I ++ +     + L+       +VP++++++             +      
Sbjct: 120 SYRCKPKDIITIRNRPTSY-NALKVESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724343|gb|ABL10745.1| ribosomal protein small subunit 4 [Pellaea glabella subsp.
           occidentalis]
 gi|118724345|gb|ABL10746.1| ribosomal protein small subunit 4 [Pellaea glabella subsp. simplex]
          Length = 187

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|18027938|gb|AAL55893.1| ribosomal protein S4 [Pteris quadriaurita]
          Length = 191

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRCK  D+I ++ +     +      
Sbjct: 83  IIFRLGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDIITIRNRPTSHNAAK-GES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P++++++             +          + +   +VVE+YSR
Sbjct: 142 PGGGGIPDHLTLSLSKNGEPAGLVNHM---ANRESXDLDINEXVVVEYYSR 189


>gi|305672327|gb|ADM63587.1| ribosomal protein S4 [Acanthocalyx albus]
          Length = 163

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 6/167 (3%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K P++      GL  Q R  K S + ++L  KQK++ +YG ++E++     + A +
Sbjct: 1   GLTNKRPIDR----SGLRNQSRSGKKSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIAGK 55

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
            +G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 56  VKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPRD 115

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           +I  + +    A +  +   + R ++P+++++       +  +I  S
Sbjct: 116 IITARDEQNSRALIQNSLDSSPREELPKHLTLQSFQYKGSVNQIIDS 162


>gi|190361225|gb|ACE76917.1| ribosomal protein small subunit 4 [Trichomanes alatum]
          Length = 166

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S FG++L AKQ+++  YG   E++     + A +++G T   L+  LE RLD IV+R
Sbjct: 13  RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 71

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRHVLVN   V+I SYRCK+ D+I ++             + + +
Sbjct: 72  LGMAPTIPAARQLVNHRHVLVNDHIVDIPSYRCKDKDLITLR-----------NQESSRK 120

Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+++  +    +N+      I          + +   LVVE+YSR
Sbjct: 121 RIPDHLKFSSSEGNNLKGLVNGI---ANRESIDLNINELLVVEYYSR 164


>gi|118724421|gb|ABL10784.1| ribosomal protein small subunit 4 [Argyrochosma jonesii]
          Length = 195

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+  +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V     L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVK-GESLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724461|gb|ABL10804.1| ribosomal protein small subunit 4 [Cheilanthes covillei]
 gi|118724473|gb|ABL10810.1| ribosomal protein small subunit 4 [Cheilanthes gracillima]
          Length = 195

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYRCK  D+I ++ ++    +V         +VP++++++             +      
Sbjct: 120 SYRCKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|307602393|gb|ADN68078.1| ribosomal protein S4 [Tetraclinis articulata]
          Length = 189

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKEGLRNIIKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|20531055|gb|AAM27350.1| ribosomal protein 4 [Tetrodontium brownianum]
          Length = 176

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ +YG I+E++     + A R++G T   L+  LE RLD +++
Sbjct: 13  NKKISQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNVIF 71

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R     TI  ARQ VNHRH+LVN   VNI SYRCK  D I +K + K    + +    ++
Sbjct: 72  RLGMALTIPGARQLVNHRHILVNNHIVNIPSYRCKPQDFITIKDRQKSQNIIAKNIDFSQ 131

Query: 162 R-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  VP +++ N       F ++          + +   LV E Y R
Sbjct: 132 KFKVPNHLTFNFSQKKGLFNQVLGRG---SIGLKINELLVGENYXR 174


>gi|307602223|gb|ADN67993.1| ribosomal protein S4 [Chamaecyparis formosensis]
 gi|307602229|gb|ADN67996.1| ribosomal protein S4 [Chamaecyparis pisifera]
          Length = 189

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
            I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 FISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|190361263|gb|ACE76936.1| ribosomal protein small subunit 4 [Vandenboschia speciosa]
          Length = 182

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/174 (33%), Positives = 89/174 (51%), Gaps = 10/174 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG  +E++     + A R++G T   L+  LE RLD 
Sbjct: 11  QSASRKVSQFCVRLEAKQKLRFNYGS-TERQLLKYVRIARRAKGSTGEVLLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE--- 155
           IV++    PTI AARQ VNHRH+LVN   ++I SYRCK  D+I +K  S       +   
Sbjct: 70  IVFQLSMAPTIPAARQLVNHRHILVNNCIIDIPSYRCKPKDIISLKSGSSPSYRSQQQDT 129

Query: 156 ASQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                E+ +P++++     ++        I          + +   LVVE+YSR
Sbjct: 130 NHFFQEKRIPDHLTFSFSENNRPKGLVNGI---ANRESIDLDINELLVVEYYSR 180


>gi|37722549|gb|AAN75496.1| ribosomal protein S4 [Anogramma chaerophylla]
 gi|38112448|gb|AAR11304.1| ribosomal protein S4 [Anogramma chaerophylla]
          Length = 191

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 2/189 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
                 K+ ++               K S F ++L AKQ+++  YG ++E++     + A
Sbjct: 3   LPGLAGKNKMSNSEEFRVASDPSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIA 61

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            ++RG T    +  LE RLD I++R     TI AARQ VNHRH+LVN R V+I SYRCK 
Sbjct: 62  RKTRGSTGQVPLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNRRIVDIPSYRCKP 121

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
            D+I ++ +     +V +   +    +P++++++      +   I          + +  
Sbjct: 122 KDLITIRNRPTSH-NVAKGESIGRNGMPDHLTLSLSKAGESAGLINHMANRESVDLDINE 180

Query: 198 NLVVEFYSR 206
             VVE+YSR
Sbjct: 181 LFVVEYYSR 189


>gi|51458174|gb|AAU03435.1| ribosomal protein small subunit 4 [Asplenium obliquum]
          Length = 190

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 23  QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++ + S 
Sbjct: 82  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRKKSL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++               I          + +   LVVE+YSR
Sbjct: 142 VGDKT-PNHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 188


>gi|254994789|ref|ZP_05276979.1| 30S ribosomal protein S4 [Anaplasma marginale str. Mississippi]
          Length = 165

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 71/143 (49%), Positives = 92/143 (64%), Gaps = 1/143 (0%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K++  RR+G NLWGR K PV TR+Y PG HG     K S FG Q  A QK K YY  +S 
Sbjct: 7   KYRASRRLGVNLWGRSKDPVATRNYPPGQHGSMGYKKLSSFGRQFAAHQKFKCYYA-MSS 65

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           K+ R+ F  A   +GDT  NL+  LESRL  +VY A FVPT+F+ARQ V+H+HV VNG+ 
Sbjct: 66  KQLRNTFLRAYNRKGDTGDNLVGALESRLAVVVYSAGFVPTVFSARQLVSHKHVTVNGKV 125

Query: 128 VNIGSYRCKEGDVIEVKQKSKQL 150
           VNI S+  K GDV++++   +  
Sbjct: 126 VNIPSFSVKPGDVVQIRDGQQSF 148


>gi|307602227|gb|ADN67995.1| ribosomal protein S4 [Chamaecyparis obtusa]
          Length = 189

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|307602225|gb|ADN67994.1| ribosomal protein S4 [Chamaecyparis lawsoniana]
          Length = 189

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKAQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|311901160|gb|ADQ13130.1| small ribosomal protein 4 [Cyclopeltis crenata]
          Length = 177

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 10  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKARGSTGQVLLQLLEMRLDN 68

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ ++   ++VL    
Sbjct: 69  VIFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDIITVRNRTTS-SNVLRGKF 127

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P+++++     +        I          + +   LVVE+YSR
Sbjct: 128 LEGDKTPDHLTISLSEGNKPAGLIHCI---ANRESVNLNINELLVVEYYSR 175


>gi|307602231|gb|ADN67997.1| ribosomal protein S4 [Cupressus atlantica]
 gi|307602237|gb|ADN68000.1| ribosomal protein S4 [Cupressus duclouxiana]
 gi|307602245|gb|ADN68004.1| ribosomal protein S4 [Cupressus sempervirens]
          Length = 189

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      V +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|18027942|gb|AAL55895.1| ribosomal protein S4 [Coniogramme fraxinea]
          Length = 191

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 2/168 (1%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI AARQ VNHRH+LVN R V+I SYR K  D++ ++ +     +   +  
Sbjct: 83  IIFQLGMASTIPAARQLVNHRHILVNHRVVDIPSYRRKPRDILTIRSRPTSRNAAK-SEY 141

Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L    +P+++ ++          +          + +   LVVE+YSR
Sbjct: 142 LGGNKIPDHLILSLPKTGEPVGLVNHMANRESVDLNINELLVVEYYSR 189


>gi|308746029|ref|YP_003934560.1| ribosomal protein S4 [Cheilanthes lindheimeri]
 gi|302375462|gb|ADL29836.1| ribosomal protein S4 [Cheilanthes lindheimeri]
          Length = 195

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVSGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYRCK  D+I ++ ++    +V         +VP++++++             +      
Sbjct: 120 SYRCKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724507|gb|ABL10827.1| ribosomal protein small subunit 4 [Notholaena standleyi]
          Length = 195

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+  +       +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLTGKNNASNLEEVRVVGEQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV---ATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   ++P++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAAK-GKSLGRDEIPDHLTLSISKTSEPAGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|165968073|gb|ABY75862.1| ribosomal protein small subunit 4 [Asplenium oblongifolium]
          Length = 188

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++   S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRNKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++               I          + +   LVVE+YSR
Sbjct: 140 VGDKT-PNHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 186


>gi|52788783|gb|AAU87372.1| ribosomal protein small subunit 4 [Anemia mexicana]
          Length = 189

 Score =  131 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 10/195 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR  ++L G     +N +        Q    K S F ++L  KQ+++  YG ++E
Sbjct: 1   RLKMIRR-SKDLPGLTSKMLNPKKVRLD-TDQSSSKKISQFCIRLETKQRLRFNYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD I++++    TI AARQ VNHRH+LVN R 
Sbjct: 58  RQLLRYVRIARKAKGSTGQVLLQLLEMRLDNIIFQSGMASTIPAARQLVNHRHILVNNRV 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISV---NHDNMVATFVRIP 183
           V+I SYRCK  D+I  + +         +     +  VP ++++   N DN       + 
Sbjct: 118 VDIPSYRCKPTDIITTENQPNSSGRFKRSIGSTGKGKVPSHLTLSVSNGDNPKGLVNGVV 177

Query: 184 SSLKDVPYPVIMQPN 198
           +        + +   
Sbjct: 178 NR---ESIDLNINEL 189


>gi|170516235|gb|ACB15119.1| small ribosomal protein 4 [Actinostrobus pyramidalis]
          Length = 194

 Score =  131 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 97/201 (48%), Gaps = 11/201 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+   L G  K   N        H   +  KPS +  +L+ KQK++ +YG +SE
Sbjct: 1   RLKIINRLKT-LPGLSKKTPNRNEQPLKKH--FKPLKPSKYPERLKEKQKLRFHYG-LSE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSS 185
           V+I SYRCK  D I +K   KQ   + E  +     VP ++      +       +I  +
Sbjct: 117 VDIPSYRCKPQDFISIKD--KQGLRINENIKDKILRVPPHLKRIKKKLQYSGLVQKIIDN 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVV +YSR
Sbjct: 175 Q---YIGLKINELLVVGYYSR 192


>gi|212004157|gb|ACJ15387.1| Rps4 [Pellaea atropurpurea]
          Length = 182

 Score =  131 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A ++RG T    +  LE RLD 
Sbjct: 15  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ +     + L+   
Sbjct: 74  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 132

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180


>gi|307602255|gb|ADN68009.1| ribosomal protein S4 [Hesperocyparis bakeri]
          Length = 189

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724447|gb|ABL10797.1| ribosomal protein small subunit 4 [Doryopteris triphylla]
          Length = 195

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          L  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEVRVLGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARRTKGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++V+             +      
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTVSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|289576416|dbj|BAI77782.1| ribosomal protein small subunit 4 [Hymenophyllum exsertum]
          Length = 187

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 5/189 (2%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A 
Sbjct: 1   LPGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T   L+  LE RLD IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  
Sbjct: 59  KAKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPK 118

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           D+I ++ +    +   E    + R  +P++++ +      +   +          + +  
Sbjct: 119 DLITIRNRPSSGS--KENIGFSRRKKIPDHLTFSFSEDKISRGLVNGIANRESIDLNINE 176

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 177 LLVVEYYSR 185


>gi|118724353|gb|ABL10750.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           californica]
          Length = 195

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 8/197 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++   
Sbjct: 2   RRLKNLPGLAGKDNASNLGEFLVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLK 60

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A ++RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I S
Sbjct: 61  YIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPS 120

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDV 189
           YR K  D+I ++ +     +V         +VP++++++             +       
Sbjct: 121 YRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANRE 176

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE++SR
Sbjct: 177 SVNLDINELLVVEYHSR 193


>gi|307602233|gb|ADN67998.1| ribosomal protein S4 [Cupressus cashmeriana]
 gi|307602235|gb|ADN67999.1| ribosomal protein S4 [Cupressus chengiana]
 gi|307602241|gb|ADN68002.1| ribosomal protein S4 [Cupressus gigantea]
 gi|307602243|gb|ADN68003.1| ribosomal protein S4 [Cupressus jiangeensis]
 gi|307602247|gb|ADN68005.1| ribosomal protein S4 [Cupressus torulosa]
          Length = 189

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      V +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724357|gb|ABL10752.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           mucronata]
          Length = 195

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFLVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|16930543|gb|AAL31953.1| ribosomal protein small subunit 4 [Woodwardia areolata]
          Length = 184

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 17  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ  NHRH+LVN R V+I SYRCK  D+I  + +     + L    
Sbjct: 76  VIFHLGMASTIPAARQLANHRHILVNNRIVDIPSYRCKPKDIITARNRPTSCNA-LRGES 134

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++ +            RI          + +   LVVE+YSR
Sbjct: 135 PRGGETPDHLTASLSEGGRPTGFVNRI---ANRESVNLNINELLVVEYYSR 182


>gi|118724449|gb|ABL10798.1| ribosomal protein small subunit 4 [Doryopteris nobilis]
 gi|118724451|gb|ABL10799.1| ribosomal protein small subunit 4 [Doryopteris rediviva]
          Length = 195

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          L  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEVRVLGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R++G T    +  LE RLD I+++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARRTKGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++V+             +      
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTVSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|119331574|gb|ABL63113.1| small ribosomal protein subunit 4 [Riccardia palmata]
          Length = 167

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 5/166 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  KQK++ ++G ++E++       A +++G T   L+  LE RLD  ++
Sbjct: 4   NKKISQYRVRLEEKQKLRFHHG-LTERQLLKYVCVAKKAKGSTGQLLLQLLEMRLDNTIF 62

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R   VPTI AARQ VNHRHVL+N   V+I SY CK GD I +K + K    +       +
Sbjct: 63  RLGMVPTIPAARQLVNHRHVLINANMVDIPSYNCKTGDTITIKNRGKNRLKLESNINSVQ 122

Query: 162 RD-VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +P +++        +  R           + +   LVVE+YSR
Sbjct: 123 KPGIPNHLAFESMEFRGSVNRTIDR---EGIDLKINELLVVEYYSR 165


>gi|23477332|gb|AAN34642.1| ribosomal protein small subunit 4 [Woodwardia martinezii]
          Length = 185

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 8/167 (4%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD ++ R
Sbjct: 22  RKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDNVISR 80

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
                TI AARQ V+HRH+LVN R V++ SYRCK  D+I V+ +     + L        
Sbjct: 81  LGMASTIPAARQLVSHRHILVNNRIVDVPSYRCKPRDIITVRNRPTSCNA-LRGESPGGS 139

Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + P++++ +            RI          + +   LVVE+YSR
Sbjct: 140 ETPDHLTASLSEGNRPTGLVNRI---ANRESVNLNINELLVVEYYSR 183


>gi|118724487|gb|ABL10817.1| ribosomal protein small subunit 4 [Cheilanthes skinneri]
          Length = 195

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 2/195 (1%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +               K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDPSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++   V TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMVSTIPAARQLVSHRHILVNHRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SYRCK  D+I ++ +S    +V     L    VP++++++          +         
Sbjct: 120 SYRCKPKDIITIRNRSTSYNAVKGKF-LERDKVPDHLTLSISKTSEQIGLVNHMANRESV 178

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE++SR
Sbjct: 179 NLDINELLVVEYHSR 193


>gi|45271088|gb|AAS56928.1| ribosomal protein small subunit 4 [Asplenium juglandifolium]
          Length = 186

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 8/169 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG +SE +     + A ++RG T    +  LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LSECQLLRYVRIARKTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN   V+I SYRC   D+I V+ +     + L+   
Sbjct: 82  VLFQLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCNPKDIITVRNRPTSC-NALKNRS 140

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
                 P+++SV     +       R+ +        + +   LV E+Y
Sbjct: 141 FVGYKTPDHLSVSFSEDNGPTGLVNRVGNR---ESINLNINELLVGEYY 186


>gi|307602239|gb|ADN68001.1| ribosomal protein S4 [Cupressus funebris]
          Length = 189

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K    +R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTP-SRIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      V +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIVKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724393|gb|ABL10770.1| ribosomal protein small subunit 4 [Paraceterach muelleri]
          Length = 184

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 17  QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYIRIAKKTRGSTGQVLLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 76  VIFKLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 134

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE+YSR
Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNYM---ANRESVNLDINELLVVEYYSR 182


>gi|165968071|gb|ABY75861.1| ribosomal protein small subunit 4 [Asplenium obtusatum]
 gi|190613944|gb|ACE80975.1| ribosomal protein small subunit 4 [Asplenium scleropium]
          Length = 188

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 21  QSTSRKMSQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++ + S 
Sbjct: 80  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSFNALRKKSL 139

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++               I          + +   LVVE+YSR
Sbjct: 140 VGDKT-PNHLAFALSEGGRPTGLVNCI---ANRESINLNINELLVVEYYSR 186


>gi|82408945|gb|ABB73267.1| ribosomal protein small subunit 4 [Loxogramme salicifolia]
          Length = 184

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E +     + A ++RG T    +  LE RLD 
Sbjct: 17  QSASRKISQFCIRLEAKQRLRLNYG-LAEHQLLKYVRVARKARGSTGQVPLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I  + +     ++     
Sbjct: 76  VIFHLGLASTVPAARQLVNHRHILVNNCVVNIPSYRCKPKDIITARNRPTSYDALRSKFT 135

Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P++++      D        I          + +   LVVE+YSR
Sbjct: 136 RGDKT-PDHLTSYLSEDDKPTGLVNCI---ANRESIKLDINELLVVEYYSR 182


>gi|32401900|gb|AAP80938.1| small ribosomal protein 4 [Calocedrus decurrens]
          Length = 190

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   + R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 2   PGLSKKTPH-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 59

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 60  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 119

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 120 LISIKEKQGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGVVKKIIDNKR---IGLK 176

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 177 INELLVVEYYSR 188


>gi|118724437|gb|ABL10792.1| ribosomal protein small subunit 4 [Astrolepis windhamii]
 gi|118724439|gb|ABL10793.1| ribosomal protein small subunit 4 [Astrolepis windhamii]
 gi|118724441|gb|ABL10794.1| ribosomal protein small subunit 4 [Astrolepis windhamii]
          Length = 195

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V     L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVK-IESLGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|18028064|gb|AAL55956.1| ribosomal protein S4 [Jamesonia imbricata]
          Length = 157

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 8/160 (5%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++L  KQ++   YG ++E++     + A ++RG T   L+  LE RLD I++R     TI
Sbjct: 1   VRLETKQRLLFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDNILFRLGMASTI 59

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
            AARQ VNHRH+LVN R V+I SYRC   D+I ++ +     ++ +   +    +P++++
Sbjct: 60  PAARQLVNHRHILVNKRIVDIPSYRCNPKDIITIRNQPISH-NMTKGESIGRDGIPDHLT 118

Query: 170 VNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++            R+          + +   LVVEFYSR
Sbjct: 119 LSLSKDGEPAGLVNRM---ASRESVDLEINELLVVEFYSR 155


>gi|307602363|gb|ADN68063.1| ribosomal protein S4 [Juniperus sabina var. arenaria]
 gi|307602365|gb|ADN68064.1| ribosomal protein S4 [Juniperus sabina var. davurica]
 gi|307602367|gb|ADN68065.1| ribosomal protein S4 [Juniperus sabina var. sabina]
          Length = 189

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  +++++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMKKNIEISQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724429|gb|ABL10788.1| ribosomal protein small subunit 4 [Aspidotis carlotta-halliae]
          Length = 195

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K           +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKHNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD I+++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARRTRGSTGQVPLQLLEMRLDNIIFQLGMASTIPAARQLVNHRHILVNHRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRGEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|190361261|gb|ACE76935.1| ribosomal protein small subunit 4 [Trichomanes scandens]
          Length = 167

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S FG++L AKQ+++  YG   E++     + A +++G T   L+  LE RLD IV+R
Sbjct: 14  RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRHVLVN   V+I SY CK+ D+I ++             + + +
Sbjct: 73  LGMAPTIPAARQLVNHRHVLVNNHIVDIPSYCCKDKDLITLR-----------NQESSRK 121

Query: 163 DVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+++ ++    +N       I          + +   LVVE+YSR
Sbjct: 122 RIPDHLKLSSLGSNNPKGLVNGI---ANRESIDLNINELLVVEYYSR 165


>gi|118724325|gb|ABL10736.1| ribosomal protein small subunit 4 [Pellaea breweri]
 gi|118724327|gb|ABL10737.1| ribosomal protein small subunit 4 [Pellaea breweri]
          Length = 195

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|82470507|gb|ABB77336.1| ribosomal protein S4-like protein [Loxogramme abyssinica]
          Length = 190

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 23  QSASRKISQFCIRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVSLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     T+ AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     +++    
Sbjct: 82  VIFQLGMASTVPAARQLVNHRHILVNNCVVDIPSYRCKPKDIITVRNRPTSSNALISKLT 141

Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P++++      +        I          + +   LVVE+YSR
Sbjct: 142 RGDKT-PDHLTSYLSEDNKPTGLVNCI---ANRESIKLDINELLVVEYYSR 188


>gi|118724365|gb|ABL10756.1| ribosomal protein small subunit 4 [Pellaea sp. UC1788706]
 gi|118724375|gb|ABL10761.1| ribosomal protein small subunit 4 [Pellaea ternifolia]
 gi|118724377|gb|ABL10762.1| ribosomal protein small subunit 4 [Pellaea ternifolia]
 gi|118724379|gb|ABL10763.1| ribosomal protein small subunit 4 [Pellaea ternifolia]
          Length = 195

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLVGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724509|gb|ABL10828.1| ribosomal protein small subunit 4 [Bommeria hispida]
          Length = 195

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLVGKDKASNLGEVRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ V+HRHVLVN R V+I 
Sbjct: 60  KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHVLVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             +      
Sbjct: 120 SYRRKPNDIITIRNRPTSYNAAK-GESLGRDEVPDHLTLSISKTTEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVKLDINELLVVEYHSR 193


>gi|329118620|ref|ZP_08247324.1| 30S ribosomal protein S4 [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465355|gb|EGF11636.1| 30S ribosomal protein S4 [Neisseria bacilliformis ATCC BAA-1200]
          Length = 118

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
            L+  LESRLD ++YR  F  T   ARQ V+H+ V VNG+ VNI SY+ K GDV+ V++K
Sbjct: 1   MLLQLLESRLDNVIYRMGFGSTRAEARQLVSHKAVTVNGQVVNIPSYQVKAGDVVAVREK 60

Query: 147 SKQLASVLEASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
           +K+   + EA  L A+   P ++SV+   M   F  +P   +       +   LVVEFYS
Sbjct: 61  AKKQVRIQEALGLAAQIGFPGWVSVDTAKMEGIFKNMPDRSE---LSGDINEQLVVEFYS 117

Query: 206 R 206
           +
Sbjct: 118 K 118


>gi|307602291|gb|ADN68027.1| ribosomal protein S4 [Juniperus communis var. communis]
 gi|307602293|gb|ADN68028.1| ribosomal protein S4 [Juniperus communis var. depressa]
          Length = 189

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVTKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724369|gb|ABL10758.1| ribosomal protein small subunit 4 [Pellaea notabilis]
          Length = 190

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A ++RG T    +  LE RLD 
Sbjct: 23  QSXSKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ +     + L+   
Sbjct: 82  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 141 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 188


>gi|307602283|gb|ADN68023.1| ribosomal protein S4 [Juniperus californica]
          Length = 189

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKDKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|41179020|ref|NP_958376.1| ribosomal protein S4 [Chlamydomonas reinhardtii]
 gi|1350892|sp|P48270|RR4_CHLRE RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|862379|gb|AAA81363.1| 30S ribosomal protein S4 [Chlamydomonas reinhardtii]
 gi|28269743|tpg|DAA00921.1| TPA_inf: ribosomal protein S4 [Chlamydomonas reinhardtii]
 gi|213517403|gb|ACJ50109.1| ribosomal protein S4 [Chlamydomonas reinhardtii]
          Length = 257

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 18/175 (10%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNT----------RSYGPGLHGQRRK-------S 43
           MS+    + ++ RRIG+      K P             +   PG HG  +        S
Sbjct: 1   MSRYLGPRLRVIRRIGKLRGFTRKKPFRRVFKGFGGFKGKVIPPGQHGLTKLLKTRPYDS 60

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
             S + ++L+ KQ+++  YG I+E++  +  ++A + +  T   L+ FLE RLD IV+R 
Sbjct: 61  SESDYLIRLKVKQRLRFNYG-ITERQLVNYVRKAKKIKESTGQVLLQFLEMRLDNIVFRL 119

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
              PTI AARQ ++H H+ VN + VNI SY CK  DVI V  K + L  V +  Q
Sbjct: 120 NMAPTIPAARQLISHGHIRVNNKKVNIPSYMCKPKDVISVAMKQRSLQLVNKNLQ 174


>gi|190361231|gb|ACE76920.1| ribosomal protein small subunit 4 [Callistopteris apiifolia]
          Length = 167

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 22/184 (11%)

Query: 26  PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
            +N R        ++     S F ++L AKQ+++  YG  +E++     + A +++G T 
Sbjct: 1   TLNMREAATDQSARK----VSQFCVRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTG 55

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
             L+  LE RLD IV++    PTI AARQ VNHRH+LVN   V+I SYRCK  D+I  + 
Sbjct: 56  QVLLQLLEMRLDNIVFQLGMAPTIPAARQLVNHRHILVNNHIVDIPSYRCKPKDIITPR- 114

Query: 146 KSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVE 202
                       + +++ +P+++ ++ +    +      I          + +   LVVE
Sbjct: 115 ----------NREYSKKKIPDHLILSFEEGNRLKGLVNGI---ANRESIDLNINELLVVE 161

Query: 203 FYSR 206
           +YSR
Sbjct: 162 YYSR 165


>gi|16930564|gb|AAL31959.1| ribosomal protein small subunit 4 [Goniopteris poiteana]
          Length = 189

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S+F ++L AKQ+++ +YG ++E++     + A ++ G T    +  LE RLD 
Sbjct: 22  QSSSRKISHFCVRLEAKQRLRFHYG-LTERQLPRYVRIARKTTGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++  +   TI AARQ V  +H+LVN   V+I SYRCK  D+I V+ +     + L    
Sbjct: 81  VIFHLRMASTIPAARQLVYLKHILVNNHIVDIPSYRCKPKDIITVRNRPTSHNA-LGGES 139

Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++   +  +       R+          + +   LVVE+YSR
Sbjct: 140 LVGGKTPDHLTISLLEGNRPTGLVNRV---ANRESVNLSINELLVVEYYSR 187


>gi|307602389|gb|ADN68076.1| ribosomal protein S4 [Microbiota decussata]
          Length = 189

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKEGLRNIIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|307602295|gb|ADN68029.1| ribosomal protein S4 [Juniperus communis var. saxatilis]
          Length = 189

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNNR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|190361229|gb|ACE76919.1| ribosomal protein small subunit 4 [Trichomanes ankersii]
          Length = 167

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S FG++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD IV+R
Sbjct: 14  RKVSQFGIRLEAKQRLRFNYGS-TERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRHVLVN   V+I SYRCK  D+I ++           + +   +
Sbjct: 73  LGMAPTIPAARQLVNHRHVLVNNHIVDIPSYRCKHKDLITLR-----------SQESFRK 121

Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P++++ +    +++      I +        + +   LVVE+YSR
Sbjct: 122 RIPDHLTFSSLEGNSIKGLINGIANRD---SIDLNINELLVVEYYSR 165


>gi|307602285|gb|ADN68024.1| ribosomal protein S4 [Juniperus chinensis]
 gi|307602307|gb|ADN68035.1| ribosomal protein S4 [Juniperus excelsa]
 gi|307602317|gb|ADN68040.1| ribosomal protein S4 [Juniperus gaussenii]
 gi|307602347|gb|ADN68055.1| ribosomal protein S4 [Juniperus polycarpos]
          Length = 189

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
            I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 FISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|23477326|gb|AAN34639.1| ribosomal protein small subunit 4 [Woodwardia harlandii]
          Length = 185

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S   ++  AKQ ++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSXSRKISXGCVRXEAKQTLRLNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I  + +     + L    
Sbjct: 77  IIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LRGES 135

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++      +       RI          + +   LVVE+YSR
Sbjct: 136 PGGSETPDHLTASLXEGNRPTGLVNRI---ANRESVNLDINELLVVEYYSR 183


>gi|42794660|gb|AAS45727.1| Rps4 [Macleania coccoloboides]
          Length = 211

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 11/172 (6%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
           K K   + ++L+ KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++
Sbjct: 40  KKKKLQYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 98

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQL 159
           R     TI  ARQ VNHRHVLVNGR ++I SYRCK  D+I  ++KS+     S      L
Sbjct: 99  RLGMASTIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDL 158

Query: 160 AERD-----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R      VP ++++N         +I          + ++  LVVE+YSR
Sbjct: 159 PSRKQKRKRVPXHLTLNRGQYKGLVKQI---XNXKWVGLKIKELLVVEYYSR 207


>gi|45271074|gb|AAS56925.1| ribosomal protein small subunit 4 [Ceratopteris thalictroides]
          Length = 185

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 18  QSVSKKISQFCIRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     SV +   
Sbjct: 77  IIFQLGLASTIPAARQLVNHRHILVNQRIVDIPSYRRKPKDIITIRNRPTSYNSVKK-ES 135

Query: 159 LAERDVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              + +P++++++    D        +          + +   LVVE+YSR
Sbjct: 136 FEGQKIPDHLTLSLLKTDQPTGLVNHM---ASRESVDLNLNELLVVEYYSR 183


>gi|289576412|dbj|BAI77780.1| ribosomal protein small subunit 4 [Hymenophyllum serrulatum]
          Length = 186

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 11/191 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G     +N R        Q    K S F ++L AKQ+++  YG  +E++     + A +
Sbjct: 1   PGLTNKKLNVREARI-ATDQSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARK 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD IV+++    TI AARQ VNHRHVLVN   V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNIVFQSGMSATIPAARQLVNHRHVLVNNHIVDIPSYRCKPKD 118

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIM 195
           +I V+ +    +   E    + R  +P++++ +             I          + +
Sbjct: 119 LITVRNRPSSGS--KENIGFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNI 173

Query: 196 QPNLVVEFYSR 206
              LVVE+YSR
Sbjct: 174 NELLVVEYYSR 184


>gi|118724349|gb|ABL10748.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           californica]
          Length = 195

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 8/197 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++   
Sbjct: 2   RRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLK 60

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A ++RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I S
Sbjct: 61  YIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPS 120

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDV 189
           YR K  D+I ++ +     +V         +VP++++++             +       
Sbjct: 121 YRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANRE 176

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE++SR
Sbjct: 177 SVNLDINELLVVEYHSR 193


>gi|118724351|gb|ABL10749.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           californica]
 gi|118724359|gb|ABL10753.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           mucronata]
 gi|118724361|gb|ABL10754.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           mucronata]
 gi|118724363|gb|ABL10755.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           mucronata]
 gi|118724383|gb|ABL10765.1| ribosomal protein small subunit 4 [Pellaea truncata]
 gi|118724387|gb|ABL10767.1| ribosomal protein small subunit 4 [Pellaea wrightiana]
          Length = 195

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|82394715|gb|ABB72436.1| ribosomal protein small subunit 4 [Loxogramme abyssinica]
          Length = 186

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 19  QSASRKISQFCIRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVSLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     +++    
Sbjct: 78  VIFHLGMASTVPAARQLVNHRHILVNNCVVDIPSYRCKPKDIITVRNRPTSSNALISKLT 137

Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P++++      +        I          + +   LVVE+YSR
Sbjct: 138 RGDKT-PDHLTSYLSEDNKPTGLVNCI---ANRESIKLDINELLVVEYYSR 184


>gi|307602405|gb|ADN68084.1| ribosomal protein S4 [Xanthocyparis vietnamensis]
          Length = 189

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
            I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 FISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|212004187|gb|ACJ15402.1| Rps4 [Pellaea sagittata]
          Length = 188

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  +E RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLIEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|306773472|emb|CBJ55312.1| putative ribosomal protein small subunit 4 [Cyathea senilis]
          Length = 163

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 39/199 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K                     S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +      + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R+
Sbjct: 40  RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRT 99

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           V++ SYRCK  D+I V                   ++P++++ +   +     RI     
Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 142 RESIDLNINELLVVEYYSR 160


>gi|307602277|gb|ADN68020.1| ribosomal protein S4 [Juniperus ashei]
 gi|307602279|gb|ADN68021.1| ribosomal protein S4 [Juniperus bermudiana]
 gi|307602281|gb|ADN68022.1| ribosomal protein S4 [Juniperus blancoi]
 gi|307602299|gb|ADN68031.1| ribosomal protein S4 [Juniperus deltoides]
 gi|307602301|gb|ADN68032.1| ribosomal protein S4 [Juniperus deppeana]
 gi|307602305|gb|ADN68034.1| ribosomal protein S4 [Juniperus durangensis]
 gi|307602309|gb|ADN68036.1| ribosomal protein S4 [Juniperus flaccida]
 gi|307602315|gb|ADN68039.1| ribosomal protein S4 [Juniperus gamboana]
 gi|307602319|gb|ADN68041.1| ribosomal protein S4 [Juniperus gracilior]
 gi|307602321|gb|ADN68042.1| ribosomal protein S4 [Juniperus horizontalis]
 gi|307602327|gb|ADN68045.1| ribosomal protein S4 [Juniperus barbadensis var. lucayana]
 gi|307602329|gb|ADN68046.1| ribosomal protein S4 [Juniperus microsperma]
 gi|307602331|gb|ADN68047.1| ribosomal protein S4 [Juniperus monosperma]
 gi|307602333|gb|ADN68048.1| ribosomal protein S4 [Juniperus monticola]
 gi|307602335|gb|ADN68049.1| ribosomal protein S4 [Juniperus occidentalis]
 gi|307602337|gb|ADN68050.1| ribosomal protein S4 [Juniperus osteosperma]
 gi|307602339|gb|ADN68051.1| ribosomal protein S4 [Juniperus oxycedrus]
 gi|307602341|gb|ADN68052.1| ribosomal protein S4 [Juniperus phoenicea]
 gi|307602369|gb|ADN68066.1| ribosomal protein S4 [Juniperus saltillensis]
 gi|307602373|gb|ADN68068.1| ribosomal protein S4 [Juniperus saxicola]
 gi|307602375|gb|ADN68069.1| ribosomal protein S4 [Juniperus scopulorum]
 gi|307602377|gb|ADN68070.1| ribosomal protein S4 [Juniperus semiglobosa]
 gi|307602381|gb|ADN68072.1| ribosomal protein S4 [Juniperus taxifolia]
 gi|307602387|gb|ADN68075.1| ribosomal protein S4 [Juniperus virginiana]
          Length = 189

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724435|gb|ABL10791.1| ribosomal protein small subunit 4 [Astrolepis cochisensis]
          Length = 195

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVXGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|306773466|emb|CBJ55309.1| putative ribosomal protein small subunit 4 [Cyathea howeana]
          Length = 163

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K                     S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +      + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R 
Sbjct: 40  RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRI 99

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           V++ SYRCK  D+I V                   ++P++++ +   +     RI     
Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 142 RESIDLNINELLVVEYYSR 160


>gi|125662680|gb|ABN50290.1| small ribosomal protein 4 [Calocedrus macrolepis]
          Length = 194

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 11/198 (5%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P   R   P      +  K S + ++L+ KQ+++ +YG + E++    
Sbjct: 1   RLKTLPGLSKKTP--NRIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 58  VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKD 188
           RCK  D+I +K+K      + +  ++ ++D   VP +++             +    + +
Sbjct: 118 RCKPQDLISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKK---RIDN 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 KRIGLKINELLVVEYYSR 192


>gi|118724459|gb|ABL10803.1| ribosomal protein small subunit 4 [Cheilanthes buchtienii]
          Length = 195

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +      L   +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRLTSNNAAK-GKSLGRDEVPDHLTLSISKTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|37992521|gb|AAR06439.1| small ribosomal protein 4 [Floribundaria sparsa var. pilifer]
          Length = 170

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 5/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S F ++L  KQK + +YG I++++  +  + A +++G T    +   E R D 
Sbjct: 4   STXNKKISQFRIRLEEKQKXRXHYG-ITDRQXLNYVRIARKAKGSTGEVSLQLPEMRSDN 62

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R    PTI  ARQ VNHRH+LVN   V+I SYR K  D I +K + K    + +  +
Sbjct: 63  VIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRXKPQDFITIKNQRKSETIIGKNIE 122

Query: 159 LAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++ ++P +++ +         +I   L      + +   LV E+YSR
Sbjct: 123 FYQKSEIPNHLTYSSLEKKGLVNQI---LDRESIGLKINELLVGEYYSR 168


>gi|16930548|gb|AAL31955.1| ribosomal protein small subunit 4 [Matteuccia struthiopteris]
          Length = 195

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K              Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   IRRLKNLPGFTGKGKTTNLGESRVATDQSASRKISQFCVRLEAKQRLRFNYG-LTERQPL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD +++      TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  KYVRIARKTRGSTGQVPLQPLEMRLDNVIFHLGMASTIPAARQLVNHRHILVNSRVVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKD 188
           SYRCK  D+  V+ +     + L    L     P++++      +       RI      
Sbjct: 120 SYRCKPKDITTVRNRPTSCNA-LRGESLGGDKTPDHLTASISEGNRPTGLVNRI---ASR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+Y R
Sbjct: 176 ESVNLNINELLVVEYYPR 193


>gi|108861110|gb|ABG21427.1| ribosomal protein small subunit 4 [Marsilea polycarpa]
          Length = 156

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 9/157 (5%)

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
           KQ+++  YG ++E++     + A +++G T   L+  LE RLD IV++    PTI AARQ
Sbjct: 2   KQRLRFNYG-LTERQLLRYVRIARKTKGSTGQVLLQLLEMRLDNIVFQLGLAPTIPAARQ 60

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYIS--- 169
            VNHRH+LVN R V++ SYRC+  D+I V+ +      +      + R  ++P+++S   
Sbjct: 61  LVNHRHILVNDRIVDVPSYRCEPQDIITVRNRPTSYNVLKGGVFESSRSNEIPDHLSLSV 120

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  +       ++    K     + +   L+VE+YSR
Sbjct: 121 LEGNKPKGVVNQV---AKRESMDLNINELLIVEYYSR 154


>gi|290467473|gb|ADD25854.1| small ribosomal protein 4 [Hymenophyllum malingii]
          Length = 191

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 12/176 (6%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSSSRKVSQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK----SKQLASVL 154
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    S   +   
Sbjct: 77  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSYSGSNSGSK 136

Query: 155 EASQLAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           E  + + R  +P++++ +             I          + +   LVVE+YSR
Sbjct: 137 ENIEFSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 189


>gi|118724313|gb|ABL10730.1| ribosomal protein small subunit 4 [Pellaea andromedifolia]
 gi|118724315|gb|ABL10731.1| ribosomal protein small subunit 4 [Pellaea andromedifolia var.
           pubescens]
          Length = 195

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+  +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYRCK  D+I ++ +     +          +VP++++++             +      
Sbjct: 120 SYRCKPKDIITIRNRPTSYNAAKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724469|gb|ABL10808.1| ribosomal protein small subunit 4 [Cheilanthes feei]
          Length = 195

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ ++    +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSFSKTSEPTGLVNHM---ASR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|18027994|gb|AAL55921.1| ribosomal protein S4 [Eriosorus rufescens]
          Length = 191

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I  + +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +     VEFYSR
Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESLDLEINELFXVEFYSR 189


>gi|118724319|gb|ABL10733.1| ribosomal protein small subunit 4 [Pellaea atropurpurea]
          Length = 170

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A ++RG T    +  LE RLD 
Sbjct: 3   QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 61

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ +     + L+   
Sbjct: 62  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNA-LKVES 120

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 121 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 168


>gi|125662702|gb|ABN50301.1| small ribosomal protein 4 [Taxodium mucronatum]
          Length = 197

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
             R+        K+P   R+  P      +  KPS + ++L+ KQ+++ +YG ++E++  
Sbjct: 2   INRLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLL 58

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I 
Sbjct: 59  QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIP 118

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSL 186
           SYRCK  D I +K K +    +     + ++D   VP +++             +I  + 
Sbjct: 119 SYRCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDNN 178

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           +     + +   LVVE+YSR
Sbjct: 179 R---IGLKINELLVVEYYSR 195


>gi|190361233|gb|ACE76921.1| ribosomal protein small subunit 4 [Trichomanes arbuscula]
          Length = 167

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S FG++L AKQ+++  YG   E++     + A R++G T   L+  LE RLD IV+R
Sbjct: 14  RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIVFR 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRHVLVN   V+I SYRCK+ D+I ++           + + + +
Sbjct: 73  LDMAPTIPAARQLVNHRHVLVNNHIVDIPSYRCKDKDLITLR-----------SQESSRK 121

Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+++ ++    +N       I          + +   LVVE+YSR
Sbjct: 122 RIPDHLELSSSEGNNPKGLVNGI---ANRESIDLNINELLVVEYYSR 165


>gi|118724405|gb|ABL10776.1| ribosomal protein small subunit 4 [Paragymnopteris vestita]
          Length = 180

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 13  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR    D+I ++ +     +V     
Sbjct: 72  VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAVKV-ES 130

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             + +VP++++++             +          + +   LVVE++SR
Sbjct: 131 FGKDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178


>gi|307602349|gb|ADN68056.1| ribosomal protein S4 [Juniperus procera]
          Length = 189

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  +  ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMKKNIENFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|307602251|gb|ADN68007.1| ribosomal protein S4 [Hesperocyparis abramsiana]
 gi|307602253|gb|ADN68008.1| ribosomal protein S4 [Hesperocyparis arizonica]
 gi|307602257|gb|ADN68010.1| ribosomal protein S4 [Hesperocyparis forbesii]
 gi|307602259|gb|ADN68011.1| ribosomal protein S4 [Hesperocyparis glabra]
 gi|307602261|gb|ADN68012.1| ribosomal protein S4 [Hesperocyparis goveniana]
 gi|307602263|gb|ADN68013.1| ribosomal protein S4 [Hesperocyparis lusitanica]
 gi|307602265|gb|ADN68014.1| ribosomal protein S4 [Hesperocyparis macnabiana]
 gi|307602267|gb|ADN68015.1| ribosomal protein S4 [Hesperocyparis macrocarpa]
 gi|307602269|gb|ADN68016.1| ribosomal protein S4 [Hesperocyparis montana]
 gi|307602271|gb|ADN68017.1| ribosomal protein S4 [Hesperocyparis sargentii]
 gi|307602273|gb|ADN68018.1| ribosomal protein S4 [Hesperocyparis stephensonii]
          Length = 189

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMNKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|307602311|gb|ADN68037.1| ribosomal protein S4 [Juniperus formosana var. formosana]
 gi|307602359|gb|ADN68061.1| ribosomal protein S4 [Juniperus rigida var. conferta]
 gi|307602361|gb|ADN68062.1| ribosomal protein S4 [Juniperus rigida var. rigida]
          Length = 189

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|51860517|gb|AAU11395.1| ribosomal protein small subunit 4 [Ephedra cutleri]
          Length = 191

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 14/196 (7%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
                  K P   +     +H   R   K S + + L+ KQK++ +YG ++E++ R    
Sbjct: 2   TLPGLTSKRPKYKKR----VHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTERQLRQYVH 56

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V+I SYRC
Sbjct: 57  IAKNAQGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDIPSYRC 116

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           K  D+I +K K  +   +       +       VP Y++ N         +I  +     
Sbjct: 117 KPQDIITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDTKD--- 173

Query: 191 YPVIMQPNLVVEFYSR 206
             + ++  LV+E+YSR
Sbjct: 174 LQLKIKEMLVIEYYSR 189


>gi|17154629|emb|CAC83926.1| ribosomal protein S4 [Klattia flava]
          Length = 175

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       + P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALXGLTSRRP----RSGSDLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K K +  A +      +  + ++P ++++N         +I  S       +
Sbjct: 116 KPRDIISTKNKQRSKALIQNFIASSPQQEELPNHLTINPFQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQ 196
            + 
Sbjct: 173 KIN 175


>gi|23477330|gb|AAN34641.1| ribosomal protein small subunit 4 [Woodwardia kempii]
          Length = 185

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S   ++  AKQ ++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 18  QSXSRKISXGCVRXEAKQTLRLNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I  + +     + L    
Sbjct: 77  IIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITARNRPTSCNA-LRGES 135

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P++++      +       RI          + +   LVVE+YSR
Sbjct: 136 PGGSETPDHLTASLXEGNRPTGLVNRI---ANRESVNLDINELLVVEYYSR 183


>gi|99639975|emb|CAJ45132.1| putative ribosomal protein S4 gene [Culcita coniifolia]
          Length = 188

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 14/193 (7%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G+  +P   R        Q    K S F ++L AKQ+++  YG ++E+  R   + A 
Sbjct: 3   LTGKATNPGEARVAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTERLLR-YVRIAR 56

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +++G T    +  LE RLD  ++ +    TI AARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 57  KTKGSTGQVPLQLLEMRLDNTIFHSGMTSTIPAARQLVNHRHILVNDRIVDIPSYRCKPK 116

Query: 139 DVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIPSSLKDVPYPV 193
           D+I V+ +             + R    P+++++     +       RI          +
Sbjct: 117 DIITVRDRPTSCNGPRSGINESSRGDKTPDHLTLSLSEDNRPKGLVNRI---ANRESIEL 173

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 174 NINELLVVEYYSR 186


>gi|119472063|ref|ZP_01614321.1| 30S ribosomal protein S4 [Alteromonadales bacterium TW-7]
 gi|119445198|gb|EAW26490.1| 30S ribosomal protein S4 [Alteromonadales bacterium TW-7]
          Length = 122

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 6/123 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
           M++    K K+ RR G +L+ +     ++++      PG HG  RK + S +GLQLR KQ
Sbjct: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGA-RKGRLSDYGLQLREKQ 59

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG + EK+FR+ +KEA R +G+T  NL+  LE RLD +VYR  F  T   ARQ V
Sbjct: 60  KVRRIYGVL-EKQFRNYYKEAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLV 118

Query: 117 NHR 119
           +H+
Sbjct: 119 SHK 121


>gi|307602313|gb|ADN68038.1| ribosomal protein S4 [Juniperus formosana var. mairei]
          Length = 189

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMNKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724373|gb|ABL10760.1| ribosomal protein small subunit 4 [Pellaea sagittata]
          Length = 191

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  +E RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLIEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 83  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 142 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189


>gi|212004233|gb|ACJ15425.1| Rps4 [Astrolepis windhamii]
          Length = 188

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE++SR
Sbjct: 139 LGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|32401886|gb|AAP80931.1| small ribosomal protein 4 [Taiwania cryptomerioides]
          Length = 193

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R             KPS + ++L+ KQ+++ +YG ++E++     + A R
Sbjct: 1   PGLSKKTPN-RIEQSSQKKHSXPPKPSKYPVRLKEKQRLRFHYG-LTERQLFQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERDV---PEYISVNHDNMV------ATFVRIPSSLKDVP 190
           +I +K K +    + +   + ++D    P ++++    M           +I  S +   
Sbjct: 119 LISIKDKQRLRNIINKNRDIFQKDKMRGPPHLNLIKKTMKKKLQYIGLVKKIIDSNR--- 175

Query: 191 YPVIMQPNLVVEFYSR 206
           + + +   LVVE+YSR
Sbjct: 176 FGLKINELLVVEYYSR 191


>gi|190361237|gb|ACE76923.1| ribosomal protein small subunit 4 [Polyphlebium borbonicum]
          Length = 155

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 19/168 (11%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L+AKQK++  YG ++E++     + A R++G T   L+  LE RLDTIVY+
Sbjct: 1   RKISQFCVRLQAKQKLRFNYG-LTERQLLKYVRIARRAKGSTGQILLQLLEMRLDTIVYQ 59

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRH+LVN   VNI SYRCK  D+I +K           + QL  +
Sbjct: 60  LGMAPTIPAARQLVNHRHILVNNHIVNIPSYRCKPKDLITLK-----------SRQLLTK 108

Query: 163 DVPEYISVNHDN----MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P++++V+ +            I          + +   LVVE+YSR
Sbjct: 109 KRPDHLTVSSEGGERPKEGLVNAI---ANRESIELNINELLVVEYYSR 153


>gi|307602275|gb|ADN68019.1| ribosomal protein S4 [Juniperus angosturana]
 gi|307602287|gb|ADN68025.1| ribosomal protein S4 [Juniperus coahuilensis]
 gi|307602289|gb|ADN68026.1| ribosomal protein S4 [Juniperus comitana]
 gi|307602343|gb|ADN68053.1| ribosomal protein S4 [Juniperus pinchotii]
          Length = 189

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LIFIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|190361251|gb|ACE76930.1| ribosomal protein small subunit 4 [Didymoglossum krausii]
          Length = 152

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 18/165 (10%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S F ++L AKQ+++  YG  +E++     + A R++G T   L+  LE RLD IV++  
Sbjct: 1   ISQFCIRLEAKQRLRFNYGS-TERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIVFQLG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164
             PTI AARQ VNHRH+LVN   VNI SYRCK  D+I            L + +   + +
Sbjct: 60  MAPTIPAARQLVNHRHILVNNCIVNIPSYRCKPKDLIT-----------LNSREFFRKII 108

Query: 165 PEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           P +++   +  ++       I          + +   LVVE+YSR
Sbjct: 109 PNHLTLSFLESNSPKGLVNGI---ANRESIDLNINELLVVEYYSR 150


>gi|307602403|gb|ADN68083.1| ribosomal protein S4 [Thujopsis dolabrata]
          Length = 189

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISV--NHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K   +  + +   + ++D   VP +++         A   +I  + +     + 
Sbjct: 119 LISIKEKQGLINIINKNRDIFKKDNMRVPPHLNWINKKSQYSALVNKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|82408943|gb|ABB73266.1| ribosomal protein small subunit 4 [Loxogramme grammitoides]
          Length = 180

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E +     + A ++RG T    +  LE RLD 
Sbjct: 13  QSASRKISQFCIRLEAKQRLRLNYG-LTEXQLLKYVRVARKARGSTGQVPLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   V+I SYRCK  D+I  + +     ++     
Sbjct: 72  VIFHLGLASTVPAARQLVNHRHILVNNCVVDIPSYRCKPKDIITARNRPTSYDALRSKFT 131

Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P++++      +        I          + +   LVVE+YSR
Sbjct: 132 RGDKT-PDHLTSYLSEDNKPTGLVNCI---ANRESIKLDINELLVVEYYSR 178


>gi|306773478|emb|CBJ55315.1| putative ribosomal protein small subunit 4 [Sphaeropteris celebica]
          Length = 163

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K                     S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +      + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R 
Sbjct: 40  RXLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRI 99

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           V++ SYRCK  D+I V                   ++P++++ +   +     RI     
Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 142 RESIDLNINELLVVEYYSR 160


>gi|32401882|gb|AAP80929.1| small ribosomal protein 4 [Cryptomeria japonica]
          Length = 195

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 11/198 (5%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P   R+  P      +  KPS + ++L+ KQ+++ +YG ++E++    
Sbjct: 2   RLKTLPGLSKKTP--NRTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLLQY 58

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SY
Sbjct: 59  VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIPSY 118

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKD 188
           RCK  D I +K K +    +     + ++D   VP +++             +I  + + 
Sbjct: 119 RCKPQDFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDNNR- 177

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 178 --IGLKINELLVVEYYSR 193


>gi|118724463|gb|ABL10805.1| ribosomal protein small subunit 4 [Cheilanthes distans]
          Length = 195

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 2/195 (1%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K+          +  Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKNNAPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +  + A R+RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  NYVRIARRTRGSTGQVSLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SYR K  D+I ++ +     +      L   +VP++++++          +         
Sbjct: 120 SYRRKPKDIITIRNRLTSYNAAK-GKSLGRDEVPDHLTLSISKTSEPTGSVNHMANRESV 178

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE++SR
Sbjct: 179 NLDINELLVVEYHSR 193


>gi|80974160|gb|ABB53773.1| small ribosomal subunit protein 4 [Glyphothecium gracile]
          Length = 153

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 5/155 (3%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD I++R    PTI  A
Sbjct: 1   EEKQKVRFHYG-ITERQLPNYVRIARKTKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGA 59

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVN 171
           RQ VNHRH+LVN   VNI SYRCK  D I +K K      + +     ++  +P +++ +
Sbjct: 60  RQLVNHRHILVNDCIVNIPSYRCKPQDFIIIKNKQNSEVVINKNKDFYQKYKIPNHLTYS 119

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +I   L      + +   LVV +YSR
Sbjct: 120 FLEKKGLVNKI---LDRESIGLRINELLVVVYYSR 151


>gi|118724355|gb|ABL10751.1| ribosomal protein small subunit 4 [Pellaea mucronata subsp.
           californica]
          Length = 195

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  +RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I 
Sbjct: 60  KYVRIARXTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|307602217|gb|ADN67990.1| ribosomal protein S4 [Callitropsis nootkatensis]
          Length = 189

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++    +        +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIMNKNIEIFQKDKMRVPPHLNRIKQNSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|45271072|gb|AAS56924.1| ribosomal protein small subunit 4 [Bommeria ehrenbergiana]
          Length = 188

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRINYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 80  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPNDIITIRNRPTSYNAAK-GES 138

Query: 159 LAERDVPEYISVNHDNM---VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   ++P++++++             +          + +   LVVE++SR
Sbjct: 139 LGRNEIPDHLTLSISKTNESTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|307602249|gb|ADN68006.1| ribosomal protein S4 [Fokienia hodginsii]
          Length = 189

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N +   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-KIQKPIKKKHSKPLKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPRD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNIINKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVQKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|32401862|gb|AAP80919.1| small ribosomal protein 4 [Sciadopitys verticillata]
          Length = 188

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 19/195 (9%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N R             K S + ++L+ KQ+ + +YG ++E++     + A 
Sbjct: 4   LPGLSKKKPNFRIEP--------NRKKSQYRVRLKEKQRARFHYG-LTERQLLQYVRIAK 54

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           RS+G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 55  RSKGSTGEILLQLLEMRLDNIIFRLGMALTIPEARQLVNHRHILVNNRMVDIPSYRCKPQ 114

Query: 139 DVIEVKQKSKQLASVLEASQLAERD-----VPEYISVN--HDNMVATFVRIPSSLKDVPY 191
           D+I ++ + +    + +     +RD     V  +++++      +    +I    +    
Sbjct: 115 DMISIRDQQRSKNRIQKNIDFYQRDKMSGKVLNHLNLSIQKSQYIGLVNQIIDIKQ---I 171

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 172 GLKINELLVVEYYSR 186


>gi|212004245|gb|ACJ15431.1| Rps4 [Cheilanthes yavapensis]
          Length = 182

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 15  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ ++    +V     
Sbjct: 74  VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVK-GES 132

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGRDEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180


>gi|290467465|gb|ADD25850.1| small ribosomal protein 4 [Hymenophyllum acanthoides]
          Length = 185

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 10/172 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 18  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 77  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSGS--KENIG 134

Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++ +             I            +   LVVE+YSR
Sbjct: 135 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFNINELLVVEYYSR 183


>gi|212004185|gb|ACJ15401.1| Rps4 [Pellaea ovata]
          Length = 195

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-MTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYIRIARKTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ +     +V       +  VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRPTSYNAVKV-ESFGKDQVPDHLTLSISKTNEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724323|gb|ABL10735.1| ribosomal protein small subunit 4 [Pellaea breweri]
 gi|212004165|gb|ACJ15391.1| Rps4 [Pellaea breweri]
          Length = 188

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|25986661|gb|AAN52767.1| ribosomal protein small subunit 4 [Selliguea feei]
          Length = 191

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     ++     
Sbjct: 83  VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 142

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P+++++     +        +          + +   LVVE+YSR
Sbjct: 143 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 189


>gi|307602391|gb|ADN68077.1| ribosomal protein S4 [Platycladus orientalis]
          Length = 189

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIKKPIKKKHFKPIKPSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +   + ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKEGSKNRIKKNIDIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|306773474|emb|CBJ55313.1| putative ribosomal protein small subunit 4 [Sphaeropteris
           aeneifolia]
          Length = 162

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+        K                     S F ++L AKQ+++  YG ++E+
Sbjct: 1   LKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTER 39

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
                 + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V
Sbjct: 40  XLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIV 99

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           ++ SYRCK  D+I V                   ++P++++ +   +     RI      
Sbjct: 100 DVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANR 141

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 142 ESIDLNINELLVVEYYSR 159


>gi|86211247|gb|ABC87296.1| small ribosomal protein 4 [Hymenophyllum acanthoides]
          Length = 180

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 10/172 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD 
Sbjct: 13  QSSSRKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV+++    TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +    +   E   
Sbjct: 72  IVFQSGMSATIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITVRNRPSSGS--KENIG 129

Query: 159 LAER-DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R  +P++++ +             I            +   LVVE+YSR
Sbjct: 130 FSRRKKIPDHLTFSFSEDNIPKGLVNGI---ANRESIDFNINELLVVEYYSR 178


>gi|212004163|gb|ACJ15390.1| Rps4 [Pellaea breweri]
          Length = 187

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|190361265|gb|ACE76937.1| ribosomal protein small subunit 4 [Cephalomanes javanicum]
          Length = 167

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD IV++
Sbjct: 14  RKVSEFCVRLEAKQRLRFNYGP-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQ 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRH+L+N   V+I SYRCK  D+I ++             + + +
Sbjct: 73  LGIAPTIPAARQLVNHRHILINNHMVDIPSYRCKPKDLITLR-----------NPESSRK 121

Query: 163 DVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P++++   +  +        I +        + +   LVVE+YSR
Sbjct: 122 KIPDHLTLSFLEGNRPNGLVNGIVNR---ESIDLNINELLVVEYYSR 165


>gi|190361247|gb|ACE76928.1| ribosomal protein small subunit 4 [Polyphlebium endlicherianum]
          Length = 165

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 19/168 (11%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L+AKQK++  YG  +E++     + A R++G T   L+  LE RLDTIVY+
Sbjct: 11  RKISQFCVRLQAKQKLRFNYGS-TERQLLKYVRIARRAKGSTGQILLQLLEMRLDTIVYQ 69

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +   +           +
Sbjct: 70  LGMAPTIPAARQLVNHRHILVNNHIVDIPSYRCKPKDLITLRSRKPLM-----------K 118

Query: 163 DVPEYISVNHDN----MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             P++++V+ +            I          + +   LVVE+YSR
Sbjct: 119 KRPDHLTVSSEEDKRPKEGLVNAI---ANRESIELNINELLVVEYYSR 163


>gi|118724389|gb|ABL10768.1| ribosomal protein small subunit 4 [Pellaea x glaciogena]
          Length = 192

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 25  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 84  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 142

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 143 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 190


>gi|212004229|gb|ACJ15423.1| Rps4 [Astrolepis cochisensis subsp. cochisensis]
          Length = 188

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|310707247|gb|ADP08973.1| Rps4 [Lindsaea virescens]
          Length = 188

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 3/189 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           NL G      N        + +    K S F ++LRAKQ+++  YG ++E++     + A
Sbjct: 1   NLPGLTGKTSNLGENRV-ANDESASRKISQFCVRLRAKQRLRFNYG-LTERELLKYVRIA 58

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +++G T   L+  LE RLD I+++     TI AARQ VNHRH+LVN R V++ SYRCK 
Sbjct: 59  RKTKGSTGQVLLQLLEMRLDNILFQLGLASTIPAARQLVNHRHILVNHRIVDVPSYRCKP 118

Query: 138 GDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
            D+I ++ +       + +    E D+P +++V+          + S        + +  
Sbjct: 119 KDIITIRHQLISYNK-MGSKLFGEGDIPHHLTVSLSENNRPVGFVNSIANRECVDLNINE 177

Query: 198 NLVVEFYSR 206
            LVVE+YSR
Sbjct: 178 LLVVEYYSR 186


>gi|42794683|gb|AAS45738.1| Rps4 [Satyria leucostoma]
          Length = 211

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 11/172 (6%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
           K K S + ++L+ KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++
Sbjct: 40  KKKKSQYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 98

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQL 159
           R     TI  ARQ VNHRHVLVNGR ++I SYRCK  D+I  ++KS+     S      L
Sbjct: 99  RLGMASTIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIIPAREKSRALIQNSFQNLFDL 158

Query: 160 AERD-----VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             R      VP ++++N         +I ++       + ++  LVVE+YSR
Sbjct: 159 PSRKRKRKRVPYHLTLNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|16930584|gb|AAL31960.1| ribosomal protein small subunit 4 [Thelypteris palustris]
          Length = 156

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 8/159 (5%)

Query: 51  QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
           +L AKQ+++  YG ++E++     +   ++RG T    +  LE RLD +++R     TI 
Sbjct: 1   RLEAKQRLRFNYG-LTERQLLKYVRIXRKTRGSTGQVPLQLLEMRLDNVIFRLGMASTIP 59

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV 170
           A RQ VNHRH+LVN R V+I SYRCK  D+I V+ +     + L          P++++V
Sbjct: 60  AXRQLVNHRHILVNNRIVDIPSYRCKPKDIITVRNRPTSY-NALRGESPGGDKTPDHLTV 118

Query: 171 ---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +       R+          + +   LVVE+YSR
Sbjct: 119 SLLEGNRPTGLVNRV---ANRESVNLNINELLVVEYYSR 154


>gi|74273235|gb|ABA01317.1| ribosomal protein S4 [Barteria sp. LBF-2005]
          Length = 160

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P    + G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GTLPGLTSKRP----NSGSDLKTQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLVRYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           K  D+I  K K +  A +          ++P++++++        
Sbjct: 116 KPRDIITTKDKQRSKALIQNYIASPPPEELPKHLTIDSFQYKGLV 160


>gi|307602351|gb|ADN68057.1| ribosomal protein S4 [Juniperus procumbens]
          Length = 189

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
            I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 FISIKEKQGLRNIMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|212004189|gb|ACJ15403.1| Rps4 [Pellaea sagittata]
          Length = 178

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 70  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 128

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 129 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 176


>gi|51458117|gb|AAU03408.1| ribosomal protein small subunit 4 [Asplenium viride]
          Length = 167

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 8/170 (4%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S F ++L AKQ +   YG +++++     + A R+RG T    +  LE RLD +
Sbjct: 1   STSRKISQFCVRLEAKQILHFNYG-LTQRQLLRYVRIARRTRGSTGQVPLQLLEMRLDNV 59

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S +
Sbjct: 60  LFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSLV 119

Query: 160 AERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++  P++++V     D       R+          + +   LVVE+YSR
Sbjct: 120 GDKT-PDHLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 165


>gi|118724495|gb|ABL10821.1| ribosomal protein small subunit 4 [Cheilanthes wrightii]
          Length = 195

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  +RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARITRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVATFVRIPSSLKD 188
           SYRCK  D+I ++ +     +V         +VP++++++             +      
Sbjct: 120 SYRCKPKDIITIRNRPTSYNAVK-GESFGRDEVPDHLTLSISQTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|212004177|gb|ACJ15397.1| Rps4 [Pellaea lyngholmii]
          Length = 187

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|212004181|gb|ACJ15399.1| Rps4 [Pellaea mucronata]
          Length = 188

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|307602399|gb|ADN68081.1| ribosomal protein S4 [Thuja plicata]
          Length = 189

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQK++ +YG + E++     + A R
Sbjct: 1   PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQKLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVI 194
           +I +K+K   +  + +   ++E+D   VP +++         A   +I  + +     + 
Sbjct: 119 LISIKEKQGLINIINQNIFISEQDQMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|190361239|gb|ACE76924.1| ribosomal protein small subunit 4 [Abrodictyum caudatum]
          Length = 167

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD IV++
Sbjct: 14  RKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQ 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRH+LVN   V+I SYRCK  D+I ++           + + + +
Sbjct: 73  FGMAPTIPAARQLVNHRHILVNNTIVDIPSYRCKPKDLITLR-----------SQESSRK 121

Query: 163 DVPEYISVNH---DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+++  +    +        I          + +   LVVE+YSR
Sbjct: 122 KIPDHLVFSSSEGNKPTGLVNEI---ASRESIDLNINELLVVEYYSR 165


>gi|118724457|gb|ABL10802.1| ribosomal protein small subunit 4 [Cheilanthes alabamensis]
 gi|118724481|gb|ABL10814.1| ribosomal protein small subunit 4 [Cheilanthes notholaenoides]
          Length = 195

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +               K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVAGDPSASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  +RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARITRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVN---HDNMVATFVRIPSSLKD 188
           SYRCK  D+I ++ +     +V  +      +VP++++++             +      
Sbjct: 120 SYRCKPKDIITIRNRPTSYNAVK-SESFGRDEVPDHLTLSISQTSEPTGLVNHM---ANR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|118724381|gb|ABL10764.1| ribosomal protein small subunit 4 [Pellaea ternifolia]
          Length = 188

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 139 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|51458146|gb|AAU03422.1| ribosomal protein small subunit 4 [Asplenium monanthes]
          Length = 189

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 8/170 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQK++  YG ++E++     + A  +RG T    +  LE RLD 
Sbjct: 24  QSTSRKISQFCVRLEAKQKLRFNYG-LTERQLLRYVRIARGTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYR K  D I V+ ++    + L +  
Sbjct: 83  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRRKPRDFITVRNRATSCNA-LRSKS 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
           L     P++++V     D       R+          + +   LV E+YS
Sbjct: 142 LVGDKTPDHLTVSLSEGDRPTGLVNRV---ANRESINLNINELLVGEYYS 188


>gi|212004179|gb|ACJ15398.1| Rps4 [Pellaea mucronata]
 gi|212004203|gb|ACJ15410.1| Rps4 [Pellaea truncata]
 gi|212004205|gb|ACJ15411.1| Rps4 [Pellaea wrightiana]
          Length = 187

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|307602303|gb|ADN68033.1| ribosomal protein S4 [Juniperus drupacea]
          Length = 189

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  + S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLRSSKYPVRLKEKQRLRFHYG-LPERQLLQYIRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 LISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|306773458|emb|CBJ55305.1| putative ribosomal protein small subunit 4 [Alsophila salvinii]
          Length = 163

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 39/199 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K                     S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +      + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R 
Sbjct: 40  RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRI 99

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           V++ SYRCK  D+I V                    +P+++S +   +     RI     
Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDKIPDHLSFSL--LKGLVNRI---AN 141

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 142 RESIDLNINELLVVEYYSR 160


>gi|118724407|gb|ABL10777.1| ribosomal protein small subunit 4 [Pellaea calomelanos]
          Length = 195

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+          +  Q    K S F ++L AKQ+++  YG ++E++  + 
Sbjct: 3   RLKNLPGLAGKNNAPNLDEARVIGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNY 61

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R+RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I SY
Sbjct: 62  VRIARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSY 121

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190
           R K  D+I ++ +     +          +VP++++++             +        
Sbjct: 122 RRKPKDIITIRNRLTSYTAAK-GKSFGRDEVPDHLTLSISKTSEPTGLVNHM---ANRES 177

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE++SR
Sbjct: 178 VNLDINELLVVEYHSR 193


>gi|212004161|gb|ACJ15389.1| Rps4 [Pellaea breweri]
          Length = 187

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|45271098|gb|AAS56932.1| ribosomal protein small subunit 4 [Selliguea triloba]
          Length = 184

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 17  QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     +      
Sbjct: 76  VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNASRNKFT 135

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P+++++     +        +          + +   LVVE+YSR
Sbjct: 136 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 182


>gi|42541366|gb|AAS19534.1| ribosomal protein small subunit 4 [Selliguea laciniata]
          Length = 179

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S   ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 12  QPASRKISQXCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     ++     
Sbjct: 71  VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 130

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P+++++     +        +          + +   LVVE+YSR
Sbjct: 131 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 177


>gi|18027992|gb|AAL55920.1| ribosomal protein S4 [Eriosorus setulosus]
          Length = 191

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I  + +     ++ +   
Sbjct: 83  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITTRNRPISH-NMTKGES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +    V EFYSR
Sbjct: 142 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVGEFYSR 189


>gi|118724485|gb|ABL10816.1| ribosomal protein small subunit 4 [Cheilanthes parviloba]
          Length = 193

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+          +  Q    K S F ++L AKQ+++  YG ++E++  + 
Sbjct: 1   RLKNLPGLAGKNNSPNLDEVRVVGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNY 59

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R+RG T    +  LE RLD ++++     TI AARQ VNHRH+LVN R V+I SY
Sbjct: 60  VRVARRTRGSTGQVPLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSY 119

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190
           R K  D+I ++ +     +  +   L   +VP++++++      +      +        
Sbjct: 120 RRKPKDIITIRNRLTSY-NATKIKSLGRDEVPDHLTLSISKTSELTGLVNHM---ANRES 175

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE++SR
Sbjct: 176 VNLDINELLVVEYHSR 191


>gi|118724431|gb|ABL10789.1| ribosomal protein small subunit 4 [Aspidotis densa]
          Length = 186

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 19  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 78  IIFQLGMASTIPAARQLVNHRHILVNHRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE++SR
Sbjct: 137 LGRGEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184


>gi|32401898|gb|AAP80937.1| small ribosomal protein 4 [Juniperus sabina]
          Length = 191

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 10/193 (5%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N R   P      +  K   + ++L+ KQ+++ +YG + E++     + A 
Sbjct: 2   LPGLSKKTPN-RIQKPIKKKHSKPLKSLXYPVRLKEKQRLRFHYG-LPERQLLQYVRIAR 59

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V I SYRCK  
Sbjct: 60  RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVXIPSYRCKPQ 119

Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPV 193
           D I +K+K      + +  ++ ++D   VP +++             +I  + +     +
Sbjct: 120 DFISIKEKQGLRNIMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGL 176

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 177 KINELLVVEYYSR 189


>gi|74273241|gb|ABA01320.1| ribosomal protein S4 [Paropsia braunii]
          Length = 163

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 6/168 (3%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       KSP +       L  Q R  K S + ++L  KQK++ +YG ++E+       
Sbjct: 1   GALPGLTSKSPRSR----SDLQTQLRSGKRSQYRIRLEEKQKLRFHYG-LTERLLLKYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC
Sbjct: 56  IAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRC 115

Query: 136 KEGDVIEVKQKSKQLASVLEAS-QLAERDVPEYISVNHDNMVATFVRI 182
           K  DVI  K K +  A +  +      R +P +++++  ++     +I
Sbjct: 116 KPRDVITTKDKERSKALIQNSLVSFPPRGLPNHLTIDSLHIKGLVNQI 163


>gi|307602395|gb|ADN68079.1| ribosomal protein S4 [Thuja koraiensis]
 gi|307602397|gb|ADN68080.1| ribosomal protein S4 [Thuja occidentalis]
          Length = 189

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  KPS + ++L+ KQK++ +YG + E++     + A R
Sbjct: 1   PGLSKKTSN-RIKKPIKKKHSKPIKPSKYPIRLKEKQKLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVI 194
           +I +K+K   +  + +   ++E+D   VP +++         A   +I  + +     + 
Sbjct: 119 LISIKEKQGLINIINQNIFISEQDKMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGLN 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|170516237|gb|ACB15120.1| small ribosomal protein 4 [Austrocedrus chilensis]
          Length = 194

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+   L G  K   N        H   +  KPS + ++L+ KQ+++ +YG + E
Sbjct: 1   RLKIINRLKT-LPGLSKKTPNRIEKPRKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LPE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMAFTIPEARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSS 185
           V+I SYRCK  D+I +K+  KQ   + +  +     VP +++     +       +I  +
Sbjct: 117 VDIPSYRCKPQDLISIKE--KQGLRINKNIKDKIMRVPPHLNRIKKKLQYSGLVNKIIDN 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVV +YSR
Sbjct: 175 K---YIGLKINELLVVGYYSR 192


>gi|306773452|emb|CBJ55302.1| putative ribosomal protein small subunit 4 [Alsophila havilandii]
 gi|306773456|emb|CBJ55304.1| putative ribosomal protein small subunit 4 [Alsophila
           pachyrrhachis]
          Length = 163

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K                     S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTE 39

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +      + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R 
Sbjct: 40  RXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRI 99

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLK 187
           V++ SYRCK  D+I V                   ++P++++ +   +     RI     
Sbjct: 100 VDVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---AN 141

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE+YSR
Sbjct: 142 RESIDLNINELLVVEYYSR 160


>gi|291533602|emb|CBL06715.1| Ribosomal protein S4 and related proteins [Megamonas hypermegale
           ART12/1]
          Length = 125

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
             G T  NL+  LE R+D +V+R     T   ARQ V+H H+ VNG+ ++I S   K GD
Sbjct: 1   MPGVTGENLLGLLERRIDNVVFRLGLASTRRQARQLVSHGHITVNGKRLDIPSALIKVGD 60

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           VI VK+KS+  A   E ++     +VP +++ +  N+  +  R P+  +     + +   
Sbjct: 61  VIGVKEKSRGTALFKEIAESKNALNVPAWLTADIQNLSGSVTRFPNRDE---IDIPVDEQ 117

Query: 199 LVVEFYSR 206
            +VE YSR
Sbjct: 118 AIVELYSR 125


>gi|118724371|gb|ABL10759.1| ribosomal protein small subunit 4 [Pellaea ovata]
          Length = 188

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F + L AKQ+++  YG ++E++  +  + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVGLEAKQRLRLNYG-LTERQLLNYIRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  VP++++++             +          + +   LVVE++SR
Sbjct: 139 FGKDQVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|118724471|gb|ABL10809.1| ribosomal protein small subunit 4 [Cheilanthes fendleri]
          Length = 193

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 8/196 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K   +          Q    K S F ++L AKQ+++  YG ++E++    
Sbjct: 1   RLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKY 59

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I SY
Sbjct: 60  VRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSY 119

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190
           RCK  D+I ++ ++    ++         +VP++++++             +        
Sbjct: 120 RCKPKDIITIRNRTTSYNAMK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---ANRES 175

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE++SR
Sbjct: 176 VNLDINELLVVEYHSR 191


>gi|212004169|gb|ACJ15393.1| Rps4 [Pellaea breweri]
          Length = 182

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 15  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 74  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180


>gi|212004201|gb|ACJ15409.1| Rps4 [Pellaea truncata]
          Length = 185

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 18  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 77  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 136 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 183


>gi|212004191|gb|ACJ15404.1| Rps4 [Pellaea ternifolia]
          Length = 187

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKISPFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|32401868|gb|AAP80922.1| small ribosomal protein 4 [Amentotaxus formosana]
          Length = 182

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 9/177 (5%)

Query: 34  PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93
            G     +  KPS + + L+ KQ+++  YG ++E++     + A R+ G T   L+  LE
Sbjct: 7   SGKKKHSKPPKPSKYPVCLKEKQRLRLNYG-LTERQLLQYVRIAXRANGSTGQVLLQLLE 65

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  D+I +K + +    +
Sbjct: 66  MRLDNIIFRLGMALTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDLISIKDQQRSRNII 125

Query: 154 LEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
            +   L++RD   VP ++++       +    +I  S +     + +   LVVE+YS
Sbjct: 126 NKNIDLSQRDKIWVPNHLNLLKKKSQYIGLVKKIIDSKR---ISLKINELLVVEYYS 179


>gi|18027940|gb|AAL55894.1| ribosomal protein S4 [Pteris multifida]
          Length = 191

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN R V+I SYRCK  D+I ++ +     +      
Sbjct: 83  IIFRFGMASTIPAARQLVNHRHILVNHRIVDIPSYRCKPRDIITIRNRPTSHNAAK-GES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P++++++             +          + +   +V E+YSR
Sbjct: 142 PGGGGIPDHLTLSLSKTGEPAGLVNNM---ANRESVDLDINELVVGEYYSR 189


>gi|118724433|gb|ABL10790.1| ribosomal protein small subunit 4 [Astrolepis cochisensis]
          Length = 192

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 25  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 84  VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 142

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 143 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 190


>gi|212004199|gb|ACJ15408.1| Rps4 [Pellaea truncata]
          Length = 185

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 18  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 77  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 136 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 183


>gi|51860473|gb|AAU11373.1| ribosomal protein small subunit 4 [Gnetum indicum]
          Length = 184

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 10/189 (5%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K P   +         R   K S     L+ KQK++ ++G ++E++ R   +   + 
Sbjct: 1   LTSKRPKYQKRVR---RSSRPWWKKSRHLACLQEKQKIRFHFG-LTERQLRQYVQITKKV 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I+YR     TI  ARQ VNHRH+LVN   VNI SY+CK  DV
Sbjct: 57  QGSTGQVLLQLLEMRLDNILYRLGLAGTIPGARQLVNHRHILVNDHVVNIPSYQCKPQDV 116

Query: 141 IEVKQKSKQLASVL---EASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
           I +K K       +     ++  E  +P +++++         +I          + ++ 
Sbjct: 117 ITIKGKKTDQLKTIITRNRNKARENKIPYHLTLDLSQNKGIVNKIIDRKD---IQLNIKE 173

Query: 198 NLVVEFYSR 206
            LV+E+YSR
Sbjct: 174 MLVIEYYSR 182


>gi|307602383|gb|ADN68073.1| ribosomal protein S4 [Juniperus thurifera]
          Length = 189

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
            I +K+K      + +  ++ ++D   VP +++             +I  + +     + 
Sbjct: 119 FISIKEKQGLRNRMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|118724427|gb|ABL10787.1| ribosomal protein small subunit 4 [Aspidotis californica]
          Length = 189

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 22  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I+++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 81  IIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 139

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE++SR
Sbjct: 140 LGRGEVPDHLTLSISKTNEATGLVNHM---ANRESVNLDINELLVVEYHSR 187


>gi|212004171|gb|ACJ15394.1| Rps4 [Pellaea bridgesii]
          Length = 187

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F + L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVSLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVSHRHILVNHRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|45271096|gb|AAS56931.1| ribosomal protein small subunit 4 [Selliguea lanceola]
          Length = 182

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 15  QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     ++     
Sbjct: 74  IIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 133

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             ++  P+++++     +        +          + +   LVVE+YSR
Sbjct: 134 GGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 180


>gi|307602323|gb|ADN68043.1| ribosomal protein S4 [Juniperus indica]
 gi|307602379|gb|ADN68071.1| ribosomal protein S4 [Juniperus squamata]
          Length = 189

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +    + +    + 
Sbjct: 119 LISIKEKQGLRNRMKKNIEIFQKDQMRVPPHLNRIKQKSQYSGLVKK---RIDNKRIGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|17154588|emb|CAC83975.1| ribosomal protein S4 [Savannosiphon euryphyllus]
          Length = 175

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 10/183 (5%)

Query: 16  GENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75
           G       K P      G  L  Q R  K S + ++L  KQK++ +YG ++E++      
Sbjct: 1   GALPRLTSKRP----RSGCDLKNQLRSGKRSQYRIRLEEKQKLRFHYG-LTERQLLKYVH 55

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR  +I SY C
Sbjct: 56  IAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIGDIPSYCC 115

Query: 136 KEGDVIEVKQKSKQLASVLEASQLA--ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPV 193
           K  D+I  K K +  A +      +  + ++P +++++         +I  S       +
Sbjct: 116 KPRDIITTKNKQRSKALIQNFIFSSPHQEELPNHLTIDPLQYKGLVNQIIDSK---WIGL 172

Query: 194 IMQ 196
            + 
Sbjct: 173 KIN 175


>gi|45271066|gb|AAS56921.1| ribosomal protein small subunit 4 [Acrostichum danaeifolium]
          Length = 197

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 8/196 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+  +          Q    K S F ++L AKQ+++  YG ++E++    
Sbjct: 5   RLNNLPGLAGKNKTSNLGEFKVASDQSASKKISQFCIRLEAKQRLRFNYG-LTERQLLKY 63

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A ++RG T   L+  LE RLD ++++     TI AARQ VNHRH+LVN R  +I SY
Sbjct: 64  VRIARKTRGSTGQVLLQLLEMRLDNVIFQLGMASTIPAARQLVNHRHILVNRRIXDIPSY 123

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVP 190
           R K  D+I ++ +     +           +P++++   +           +        
Sbjct: 124 RRKPTDMITIRNRPTSYNAXKR-ESFGGHKIPDHLTLSLLETGESAGLVNHM---ANRES 179

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 180 VDLNLNELLVVEYYSR 195


>gi|212004167|gb|ACJ15392.1| Rps4 [Pellaea breweri]
          Length = 187

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 20  QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|212004239|gb|ACJ15428.1| Rps4 [Cheilanthes newberryi]
          Length = 184

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 17  QSASKKISQFXVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ ++    +V     
Sbjct: 76  VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVK-GES 134

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 135 FGRDEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 182


>gi|170516211|gb|ACB15107.1| small ribosomal protein 4 [Saxegothaea conspicua]
          Length = 216

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 45/229 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+  +L G  K     R           K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLK-DLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  
Sbjct: 49  RQLLQYVRIARTAKGPTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGCM 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------- 162
           V+I SY CK  DV+ +K + +    + +   L ++                         
Sbjct: 109 VDIPSYPCKPKDVVTIKDQQRSRNIIDKNMDLPKKHQERSRLISKRIINRKNIIFFLFKK 168

Query: 163 -----DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 VP +++++         RI  S +     + +   LV+E++SR
Sbjct: 169 HEMKHKVPFHLTLDSSQYKGVVNRIIDSTR---IGLNINELLVIEYFSR 214


>gi|212004175|gb|ACJ15396.1| Rps4 [Pellaea lyngholmii]
          Length = 182

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 15  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 74  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180


>gi|190361249|gb|ACE76929.1| ribosomal protein small subunit 4 [Didymoglossum hildebrandtii]
          Length = 152

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 18/165 (10%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
            S FG++L  KQ+++  YG ++E++     + A R++G T   L+  LE RLD IV++  
Sbjct: 1   ISQFGVRLETKQRLRFNYG-LTERQLLKYVRIARRAKGSTGQVLLQLLEMRLDNIVFQLG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164
             PTI AARQ VNHRH+LV    VNI SYRCK  D+I            L + +   + +
Sbjct: 60  MAPTIPAARQLVNHRHILVKNCIVNIPSYRCKPKDIIT-----------LSSRESFRKII 108

Query: 165 PEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           P +++   +  +        +          + +   LVVE+YSR
Sbjct: 109 PNHLTLSFLESNRPKGLVNGV---ADRESIDLNINELLVVEYYSR 150


>gi|118724505|gb|ABL10826.1| ribosomal protein small subunit 4 [Notholaena candida]
          Length = 186

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T   L+  LE RLD 
Sbjct: 19  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVLLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 78  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-GKS 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE++SR
Sbjct: 137 LGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184


>gi|184128079|gb|ACC67939.1| ribosomal protein small subunit 4 [Tmesipteris obliqua]
          Length = 172

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 7/165 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S + ++L AKQ+++  YG ++E++       A ++RG T   L+  LE RLD 
Sbjct: 12  QSTSRKRSQYSIRLEAKQRLRFNYG-LTERQLLKYVYIAKKARGSTGQVLLQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D+I V+        + +   
Sbjct: 71  IIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSYRCKPNDIITVRDHKNSQELIKKNMI 130

Query: 159 LAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
            +  ++P +++   +          +I          + +   LV
Sbjct: 131 SSIDEIPNHLNLSYLEETKPKGLINQIVDR---ESIGLEINELLV 172


>gi|212004241|gb|ACJ15429.1| Rps4 [Cheilanthes pringlei]
          Length = 182

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A  +RG T    +  LE RLD 
Sbjct: 15  QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARITRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ +     +V  +  
Sbjct: 74  VIFQLNMASTIPAARQLVSHRHILVNHRIVDIPSYRCKPKDIITIRNRPTSYNAVK-SES 132

Query: 159 LAERDVPEYISVN---HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             + +VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGKDEVPDHLTLSISQTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180


>gi|23477334|gb|AAN34643.1| ribosomal protein small subunit 4 [Woodwardia prolifera]
          Length = 179

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T       LE RLD 
Sbjct: 12  QSASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVPPQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++R     TI AARQ VNHRH+LVN R V++ SYRCK  D+I V+ +     + L    
Sbjct: 71  VIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSYRCKPKDIITVRSRPTSYNA-LRGES 129

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               + P+++  +            RI          + +   LVVE+ SR
Sbjct: 130 PGGGETPDHLIASLSEGXRPTGLVNRI---ANXESVNLNINELLVVEYCSR 177


>gi|298204988|emb|CBI34295.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSCYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++  +    A +++      L+  LE  LD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLNYVHIARKAKWAIGRVLLQLLEMHLDNILFRLGMASTILGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKE 137
           +LVNGR V+I SY CK 
Sbjct: 116 ILVNGRIVDIPSYCCKP 132


>gi|118724385|gb|ABL10766.1| ribosomal protein small subunit 4 [Pellaea wrightiana]
          Length = 184

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 17  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 76  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 134

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 182


>gi|32401890|gb|AAP80933.1| small ribosomal protein 4 [Thuja plicata]
          Length = 190

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 10/193 (5%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N R   P      +  KPS + ++L+ KQK++ +YG + E++     + A 
Sbjct: 1   LPGLSKKTSN-RIKKPIKKKHSKPIKPSKYPVRLKEKQKLRFHYG-LPERQLLQYVRIAR 58

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  
Sbjct: 59  RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVHIPSYRCKPQ 118

Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193
           D+I +K+K   +  + +   ++E+D   VP +++         A   +I  + +     +
Sbjct: 119 DLISIKEKQGLINIINQNIFISEQDQMRVPPHLNWIKKKSQYSALVNKIIDNKR---IGL 175

Query: 194 IMQPNLVVEFYSR 206
            +   LVVE+YSR
Sbjct: 176 NINELLVVEYYSR 188


>gi|125662700|gb|ABN50300.1| small ribosomal protein 4 [Cunninghamia lanceolata var. konishii]
          Length = 197

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 11/201 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I  R+        K+P   +          +  KPS + ++L+ KQK++ +YG ++E++ 
Sbjct: 1   IIHRLKTLPGLSKKTPNRIKQPS--KKKHSKPPKPSKYPVRLKEKQKLRFHYG-LTERQL 57

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I
Sbjct: 58  LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRLVDI 117

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAE---RDVPEYISVNHDN--MVATFVRIPSS 185
            SYRCK  D+I +K K +    + +  ++ +   R VP ++++       +    +I  S
Sbjct: 118 PSYRCKPQDLISIKDKQRLRNLIYKNREIFQKEKRRVPPHLNLIKKKSQYIGLVKKIIDS 177

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
            +     + +   LVVE+YSR
Sbjct: 178 NR---ISLKINELLVVEYYSR 195


>gi|118724479|gb|ABL10813.1| ribosomal protein small subunit 4 [Cheilanthes multifida]
          Length = 188

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 8/170 (4%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD +
Sbjct: 22  STSKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDNV 80

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           +++     TI AARQ VNHRH+LVN R V+I SYRCK  D+I ++ +     +      +
Sbjct: 81  IFQLNMASTIPAARQLVNHRHILVNRRIVDIPSYRCKPKDIITIRNRLTSYNAAK-GKSI 139

Query: 160 AERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +VP++++++      +      +          + +   LVVE++SR
Sbjct: 140 GRDEVPDHLTLSISKTSELTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|118724475|gb|ABL10811.1| ribosomal protein small subunit 4 [Cheilanthes lanosa]
          Length = 195

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++  
Sbjct: 1   MRRLKNLPGLAGKDNASNLGEFRVTGDQLASKKISQFCVRLEAKQRLRLNYG-LTERQLL 59

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I 
Sbjct: 60  KYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDIP 119

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKD 188
           SYR K  D+I ++ ++   ++  +       +VP++++++             +      
Sbjct: 120 SYRRKPKDIITIRNRTTS-SNAAKGESFGRDEVPDHLTLSFSKTSEPTGLVNHM---ASR 175

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE++SR
Sbjct: 176 ESVNLDINELLVVEYHSR 193


>gi|212004243|gb|ACJ15430.1| Rps4 [Cheilanthes sieberi]
          Length = 188

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 2/168 (1%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 21  QSAXKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 80  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 138

Query: 159 LAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++          +          + +   LVVE++SR
Sbjct: 139 FGRDEVPDHLTLSISKTSEPTGSVNHMANRESVNLDINELLVVEYHSR 186


>gi|51458168|gb|AAU03432.1| ribosomal protein small subunit 4 [Asplenium viellardii]
          Length = 188

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE RLD 
Sbjct: 23  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +     ++ + S 
Sbjct: 82  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRPTSCNALRKKSL 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + ++  P +++               I          + +   LV E+YSR
Sbjct: 142 VGDKT-PNHLTFALSEGGRPTGLVNCI---ANRESINLNINELLVGEYYSR 188


>gi|307602297|gb|ADN68030.1| ribosomal protein S4 [Juniperus convallium]
 gi|307602325|gb|ADN68044.1| ribosomal protein S4 [Juniperus komarovii]
 gi|307602345|gb|ADN68054.1| ribosomal protein S4 [Juniperus pingii]
 gi|307602353|gb|ADN68058.1| ribosomal protein S4 [Juniperus przewalskii]
 gi|307602357|gb|ADN68060.1| ribosomal protein S4 [Juniperus coxii]
 gi|307602371|gb|ADN68067.1| ribosomal protein S4 [Juniperus saltuaria]
 gi|307602385|gb|ADN68074.1| ribosomal protein S4 [Juniperus tibetica]
          Length = 189

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
           +I +K+K      + +  ++ ++D   VP +++             +    + +    + 
Sbjct: 119 LISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKK---RIDNKRIGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|18028020|gb|AAL55934.1| ribosomal protein S4 [Jamesonia cinnamomea]
          Length = 190

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L  KQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 23  QSASRKISQFCVRLETKQRLRFNYG-LTERQLLKYVRIARKTRGSTGQVLLQLLEMRLDN 81

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++R     TI AARQ VNHRH+LVN   V+I SYRC   D+I ++ +     ++ +   
Sbjct: 82  ILFRLGMASTIPAARQLVNHRHILVNKGIVDIPSYRCNPKDIITIRNRP-IFHNMTKGES 140

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +    +P++++++             +          + +    V EFYSR
Sbjct: 141 IGRDGIPDHLTLSVSKDGEPSGLVNSM---ASRESVDLEINELFVGEFYSR 188


>gi|118724395|gb|ABL10771.1| ribosomal protein small subunit 4 [Paragymnopteris bipinnata]
          Length = 186

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 19  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR    D+I ++ +     +V     
Sbjct: 78  VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAVKV-ES 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 137 FVRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184


>gi|190361241|gb|ACE76925.1| ribosomal protein small subunit 4 [Trichomanes crispum]
          Length = 167

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S FG++L AKQ+++  YG   E++     + A +++G T   L+  LE RLD IV+R
Sbjct: 14  RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHR VLVN   V+I SYRCK+ D+I ++           + + + +
Sbjct: 73  LGMAPTIPAARQLVNHRRVLVNNHIVDIPSYRCKDKDLITLR-----------SQESSRK 121

Query: 163 DVPEYISVNHD---NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+++  + +   N       I          + +   LVVE+YSR
Sbjct: 122 RIPDHLKFSSEEGNNPKGLVNGI---ANRESIDLNINELLVVEYYSR 165


>gi|170516213|gb|ACB15108.1| small ribosomal protein 4 [Widdringtonia nodiflora]
          Length = 194

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 11/201 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+   L G  K   N        H + RK  PS + ++L+ KQ+++ +Y  + E
Sbjct: 1   RLKIINRLKT-LPGLSKKTPNRIEKPKKKHFKPRK--PSKYPVRLKEKQRLRFHY-RLPE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSS 185
           V+I SYRCK  D I +K+  KQ   + +        VP +++     +       +I  +
Sbjct: 117 VDIPSYRCKPQDFISIKE--KQGLRITKNINNKIMRVPPHLNRIKKKLQYSGLVKKIIDN 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVV +YSR
Sbjct: 175 K---YIGLKINELLVVGYYSR 192


>gi|66352022|gb|AAY44744.1| ribosomal protein system 4 [Splachnum pensylvanicum]
          Length = 173

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 5/174 (2%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G  L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  +
Sbjct: 1   RRLGA-LPGLTNKTLQLKSSPINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I S
Sbjct: 57  YVRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           YRCK  D I +K + K    + +  +  ++  +P ++  N         +I   
Sbjct: 117 YRCKPQDFITIKNRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDR 170


>gi|25986663|gb|AAN52768.1| ribosomal protein small subunit 4 [Selliguea enervis]
          Length = 189

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 8/166 (4%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD +++  
Sbjct: 27  KISQFCVRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDNVIFHL 85

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
               T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     ++       ++ 
Sbjct: 86  GIASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFTGGDKT 145

Query: 164 VPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            P+++++     +        +          + +   LVVE+YSR
Sbjct: 146 -PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 187


>gi|107770434|gb|ABF83758.1| small ribosomal protein 4 [Taxus wallichiana var. wallichiana]
          Length = 197

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + KI  R+        K P   R   P      +  KPS + ++L+ KQ+++ +YG
Sbjct: 2   YRGPRLKIVNRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRFHYG 59

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            ++E++     + A RS+G T   L+  LE RLD I++R     TI  ARQ V+HRH+LV
Sbjct: 60  -LTERQLLQYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRHILV 118

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVAT 178
           N R V+I SYRCK  D+I +K + + +  +     L++RD   VP ++++       +  
Sbjct: 119 NDRIVDIPSYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQYIGL 178

Query: 179 FVRIPSSLKDVPYPVIMQP 197
             +I  S +     + +  
Sbjct: 179 VKKIIDSKR---ISLKINE 194


>gi|118724401|gb|ABL10774.1| ribosomal protein small subunit 4 [Paragymnopteris marantae]
          Length = 191

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 83  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 142 FGRDEVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189


>gi|212004227|gb|ACJ15422.1| Rps4 [Astrolepis cochisensis]
 gi|212004231|gb|ACJ15424.1| Rps4 [Astrolepis integerrima]
          Length = 180

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 13  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 72  VIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 130

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 131 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178


>gi|190361245|gb|ACE76927.1| ribosomal protein small subunit 4 [Abrodictyum elongatum]
          Length = 167

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD IV++
Sbjct: 14  RKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQVLLQLLEMRLDNIVFQ 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRH+LVN   V+I SYRCK  D+I ++           + + + +
Sbjct: 73  LGMAPTIPAARQLVNHRHILVNNNIVDIPSYRCKPKDLITLR-----------SRESSRK 121

Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P+++ ++      +      I          + +   LVVE+YSR
Sbjct: 122 KIPDHLMLSSSEGNRLTGLVNEI---ANRESIELNINELLVVEYYSR 165


>gi|212004183|gb|ACJ15400.1| Rps4 [Pellaea sp. UC 1795070]
          Length = 180

 Score =  128 bits (321), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 13  QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 72  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 130

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 131 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178


>gi|212004159|gb|ACJ15388.1| Rps4 [Pellaea brachyptera]
          Length = 186

 Score =  128 bits (321), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 19  QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 78  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 137 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184


>gi|307602355|gb|ADN68059.1| ribosomal protein S4 [Juniperus pseudosabina]
          Length = 189

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 10/192 (5%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
            G  K   N R   P      +  K S + ++L+ KQ+++ +YG + E++     + A R
Sbjct: 1   PGLSKKTPN-RIQKPIKKKHSKPLKSSKYPVRLKEKQRLRFHYG-LPERQLLQYVRIARR 58

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  D
Sbjct: 59  AKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSYRCKPQD 118

Query: 140 VIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKDVPYPVI 194
            I +K+K      + +  ++ ++D   VP +++             +   + +     + 
Sbjct: 119 FISIKEKQGLRNRMKKNIEIFQKDKMRVPPHLNRIKQKSQYSGLVKKKIDNKR---IGLK 175

Query: 195 MQPNLVVEFYSR 206
           +   LVVE+YSR
Sbjct: 176 INELLVVEYYSR 187


>gi|212004207|gb|ACJ15412.1| Rps4 [Pellaea wrightiana]
          Length = 185

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 18  QSASKKIFQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 76

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 77  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 135

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 136 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 183


>gi|212004195|gb|ACJ15406.1| Rps4 [Pellaea ternifolia]
          Length = 181

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 14  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 72

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 73  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 131

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 132 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 179


>gi|118724491|gb|ABL10819.1| ribosomal protein small subunit 4 [Cheilanthes viridis var. glauca]
          Length = 188

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 80  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP+Y++++             +          + +   LVVE++SR
Sbjct: 139 FGRDEVPDYLTLSLSKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|212004153|gb|ACJ15385.1| Rps4 [Pellaea andromedifolia]
          Length = 184

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 17  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYRCK  D+I ++ +     +      
Sbjct: 76  VIFQLGIASTIPAARQLVNHRHILVNRRIVDIPSYRCKPKDIITIRNRPTSYNAAKV-ES 134

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 135 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 182


>gi|118724347|gb|ABL10747.1| ribosomal protein small subunit 4 [Pellaea intermedia]
          Length = 182

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 15  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 74  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGKDQVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180


>gi|212004197|gb|ACJ15407.1| Rps4 [Pellaea truncata]
          Length = 186

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S   ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 19  QSASKKISQXCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 78  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 137 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184


>gi|32401888|gb|AAP80932.1| small ribosomal protein 4 [Fitzroya cupressoides]
          Length = 193

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           I  R+   L G  K   N        H   +  KPS + ++L+ KQ+++ +YG + E++ 
Sbjct: 3   IINRLKT-LPGLSKKTPNRIEKPKKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LPERQL 58

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I
Sbjct: 59  LQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDI 118

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIPSSLKD 188
            SYRCK  D+I +K+  KQ   + +        VP +++     +       +I  +   
Sbjct: 119 PSYRCKPQDLISIKE--KQGLRINQNINNKIIRVPPHLNRIKKKLQYSGLVKKIIDNK-- 174

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 175 -YIGLKINELLVVEYYSR 191


>gi|118724511|gb|ABL10829.1| ribosomal protein small subunit 4 [Bommeria hispida]
          Length = 180

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 13  QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 71

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRHVLVN R V+I SYR K  D+I ++ +     +      
Sbjct: 72  VIFQLGMASTIPAARQLVSHRHVLVNRRIVDIPSYRRKPNDIITIRNRPTSYNAAK-GES 130

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE++SR
Sbjct: 131 LGRDEVPDHLTLSISKTTEPTGLVNHM---ANRESVKLDINELLVVEYHSR 178


>gi|306773454|emb|CBJ55303.1| putative ribosomal protein small subunit 4 [Alsophila imrayana]
          Length = 162

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+        K                     S F ++L AKQ+++  YG ++E+
Sbjct: 1   LKVIRRLKNLPGLTRK--------------------MSQFCVRLEAKQRLRFNYG-LTER 39

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
                 + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V
Sbjct: 40  XLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIV 99

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           ++ SYRCK  D+I V                   ++P++++ +   +     RI      
Sbjct: 100 DVPSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANR 141

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 142 ESIDLNINELLVVEYYSR 159


>gi|118724423|gb|ABL10785.1| ribosomal protein small subunit 4 [Argyrochosma limitanea]
          Length = 180

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 8/175 (4%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLES 94
           G   Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T   L+  LE 
Sbjct: 9   GXGDQSVSKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVLLQLLEM 67

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     ++ 
Sbjct: 68  RLDNVIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAMK 127

Query: 155 EASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               L + +VP++++++             +          + +   LVVE++SR
Sbjct: 128 -GESLGKDEVPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 178


>gi|118724403|gb|ABL10775.1| ribosomal protein small subunit 4 [Paragymnopteris sargentii]
          Length = 182

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 15  QSPSKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 74  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGRDEVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 180


>gi|212004223|gb|ACJ15420.1| Rps4 [Paragymnopteris vestita]
          Length = 187

 Score =  127 bits (320), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR    D+I ++ +     +      
Sbjct: 79  VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAAKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP +++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPNHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|42794664|gb|AAS45729.1| Rps4 [Macleania insignis]
          Length = 142

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 7/147 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR--KSKPSYFGLQLRAKQKM 58
           MS+    + K  RR+G       K P      G     Q R  K     + ++L+ KQK+
Sbjct: 1   MSRYRGPRFKKIRRLGALPGLTNKKP----KTGNSRRTQSRFVKKXXXQYHIRLQEKQKL 56

Query: 59  KKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           + +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNH
Sbjct: 57  RFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNH 115

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
           RHVLVNGR ++I SYRCK  D+I  ++
Sbjct: 116 RHVLVNGRIIDIPSYRCKPRDIITARE 142


>gi|118724321|gb|ABL10734.1| ribosomal protein small subunit 4 [Pellaea brachyptera]
          Length = 195

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 8/197 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K   +          Q    K S F ++L AKQ+++  YG ++E++   
Sbjct: 2   RRLKNLPGLAGKDNASNLGEFLVAGDQSASKKISQFCVRLXAKQRLRLNYG-LTERQLLK 60

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A ++RG T    +  LE RLD ++++     TI AARQ  NHRH+LVN R V+I S
Sbjct: 61  YIRIARKTRGSTGQVPLQLLEMRLDNVIFQXGMASTIPAARQLXNHRHILVNRRIVDIPS 120

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDV 189
           YR K  D+I ++ +     +V         +VP++++++             +       
Sbjct: 121 YRRKPKDIITIRNRPTSYNAVKV-ESFGRDEVPDHLTLSISKTNEPTGLVNHM---ANRE 176

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVVE++SR
Sbjct: 177 SVNLDINELLVVEYHSR 193


>gi|212004237|gb|ACJ15427.1| Rps4 [Cheilanthes feei]
          Length = 183

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 16  QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ ++    +V     
Sbjct: 75  VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRTTSYNAVK-GES 133

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 134 FGRDEVPDHLTLSFSKTSEPTGLVNHM---ASRESVNLDINELLVVEYHSR 181


>gi|118724443|gb|ABL10795.1| ribosomal protein small subunit 4 [Astrolepis sinuata]
          Length = 193

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K   +          Q    K S F ++L AKQ+++  YG ++E++    
Sbjct: 1   RLKNLPGLAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKY 59

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A ++RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I SY
Sbjct: 60  VRIARKTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIVDIPSY 119

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLKDVP 190
           R K  D+I ++ +     +V     L   +VP++++++             +        
Sbjct: 120 RRKPKDIITIRNRPTSYNAVKV-ESLERDEVPDHLTLSISKTNEPTGLVNHM---ANRES 175

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE++SR
Sbjct: 176 VNLDINELLVVEYHSR 191


>gi|16565361|gb|AAL26199.1|AF313592_1 small ribosomal protein 4 [Isoetes engelmannii]
          Length = 190

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 8/195 (4%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K+    +     ++      K S + ++L  KQK++ +YG ++E++   
Sbjct: 1   RRLPRLPGPTQKTH---KKKPDFINRSTSSKKASKYRVRLEEKQKLRFHYG-LTERQLLE 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A  ++G T    +  LE R D I+      PTI  ARQ VNH+H+LVN  ++NI S
Sbjct: 57  YVRIARGAKGSTGQVSLQSLEMRSDNIILGLGMAPTIPGARQMVNHKHILVNSCTINIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           YRCK  D+I ++ + K  A +      + +   P + + +    +    +I         
Sbjct: 117 YRCKPKDIITMRNRPKSQAMITRNRDSSRKYKKPNHSTFHSSQNIGLVNQIIDR---EWI 173

Query: 192 PVIMQPNLVVEFYSR 206
              ++  LVVE++SR
Sbjct: 174 DSKIKELLVVEYHSR 188


>gi|306773462|emb|CBJ55307.1| putative ribosomal protein small subunit 4 [Alsophila tricolor]
          Length = 162

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+        K                     S F ++L AKQ+++  YG ++E+
Sbjct: 1   LKVIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTER 39

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
                 + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V
Sbjct: 40  XLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIV 99

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKD 188
           ++ SYRCK  D+I V+                   +P++++ +   +     RI      
Sbjct: 100 DVPSYRCKPKDIITVESSRGDQ-------------IPDHLTFSL--LKGLVNRI---ANR 141

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVVE+YSR
Sbjct: 142 ESIDLNINELLVVEYYSR 159


>gi|212004235|gb|ACJ15426.1| Rps4 [Cheilanthes bonariensis]
          Length = 179

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 12  QSXSKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ ++    +V     
Sbjct: 71  VIFQLNMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSYNAVK-GKS 129

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++P++++++             +          + +   LVVE++SR
Sbjct: 130 FGRDEIPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 177


>gi|118724399|gb|ABL10773.1| ribosomal protein small subunit 4 [Paragymnopteris marantae]
          Length = 182

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 15  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 73

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 74  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 132

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 133 FGRDEVPDHLTLSISKANEPTGLVNHM---ANXESVNLDINELLVVEYHSR 180


>gi|212004221|gb|ACJ15419.1| Rps4 [Paragymnopteris marantae]
          Length = 187

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QSASKKIXQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR    D+I ++ +     +      
Sbjct: 79  VIFQLGMASTIPAARQLVSHRHILVNCRIVDIPSYRRNPKDIITIRNRPTSYNAAKV-ES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP +++++             +          + +   LVVE++SR
Sbjct: 138 FGRDEVPNHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|118724503|gb|ABL10825.1| ribosomal protein small subunit 4 [Notholaena californica]
          Length = 191

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 83  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAAK-GKS 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   ++P++++++             +          + +   LVVE++SR
Sbjct: 142 LGRDEIPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189


>gi|32401856|gb|AAP80916.1| small ribosomal protein 4 [Prumnopitys taxifolia]
          Length = 212

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 45/225 (20%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+  +L G  K     R           K K S + ++L  KQK++ +YG +++++  
Sbjct: 1   IRRLK-DLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTDRQLL 48

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I 
Sbjct: 49  QYVRIARTAKGPTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGCMVDIP 108

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER----------------------------- 162
           SY CK  DV+ +K + +    + +   L ++                             
Sbjct: 109 SYPCKPKDVVTIKDQQRSRNIIDKNMDLPKKHQERSRSSLRGSLIGKIXIFFLFKKHEMK 168

Query: 163 -DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             VP +++++         RI  S +     + +   LV+E++SR
Sbjct: 169 HKVPFHLTLDSSQYKGVVNRIIDSTR---IGLNINELLVIEYFSR 210


>gi|118724445|gb|ABL10796.1| ribosomal protein small subunit 4 [Pellaea gleichenioides]
          Length = 188

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A ++RG T    +  LE RLD 
Sbjct: 21  QSASKKISQFCVRLEAKQRLRINYG-LTERQLLNYVRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 80  VIFQLGMASTIPAARQLVNHRHILVNCRIVDIPSYRRKPKDIITIRNRLTSYNAAKGKF- 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   +VP++++++             +          + +   LVVE++SR
Sbjct: 139 LGRAEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|32401884|gb|AAP80930.1| small ribosomal protein 4 [Athrotaxis selaginoides]
          Length = 200

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
             R+        K+P   ++  P      +  +PS + ++L+ KQ+++ +YG +++++  
Sbjct: 1   INRLKTLPGLSKKTP--NKNEEPSKKKHSKPPRPSKYPVRLKEKQRLRFHYG-LTDRQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A  ++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I 
Sbjct: 58  KYVRIARXAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEY------ISVNHDNMVATFVRI 182
           SYRCK  D I +K K + +  + +   + ++D   VP +         +         +I
Sbjct: 118 SYRCKPQDFISIKDKQRLINRINQNIDIFQKDKMRVPSHLNLKKNKKKSLYKYXGLVKKI 177

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
             + +     + +   LVVE+YSR
Sbjct: 178 IDNXR---IGLKINELLVVEYYSR 198


>gi|212004173|gb|ACJ15395.1| Rps4 [Pellaea intermedia]
          Length = 179

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 12  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 71  VIFQLGMASTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 129

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +  VP++++++             +          + +   LVVE++SR
Sbjct: 130 FGKDQVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 177


>gi|118724483|gb|ABL10815.1| ribosomal protein small subunit 4 [Cheilanthes parryi]
          Length = 195

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 10/199 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHG-QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
            RR+  NL GR      +      + G Q    K S F ++L AKQ+++  YG ++E++ 
Sbjct: 1   MRRLK-NLPGRAGKDNASNLGEFRVAGDQSASKKISQFCVRLEAKQRLRLNYG-LTERQL 58

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V+I
Sbjct: 59  LKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLNMASTIPAARQLVSHRHILVNRRIVDI 118

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATFVRIPSSLK 187
            SYR K  D+I ++ ++    +V         +VP++++++             +     
Sbjct: 119 PSYRRKPKDIITIRNRTTSYNAVK-GESFGRDEVPDHLTLSISKTSEPTGLVNHM---AS 174

Query: 188 DVPYPVIMQPNLVVEFYSR 206
                + +   LVVE++SR
Sbjct: 175 RESVNLDINELLVVEYHSR 193


>gi|225549562|ref|ZP_03770528.1| ribosomal protein S4 [Borrelia burgdorferi 118a]
 gi|225369839|gb|EEG99286.1| ribosomal protein S4 [Borrelia burgdorferi 118a]
          Length = 147

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SE++  + FKEA +  G T  NL+S LE R+D +VYRA F  +   ARQ V+H 
Sbjct: 1   FTYG-VSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNVVYRAGFAISRAHARQIVSHG 59

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMVA 177
            +++NGR V I S   +  D I++K+K      +    +   + R++P +I VN D++  
Sbjct: 60  IIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLNI 119

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                PS  +    P +    +VVE+YS+
Sbjct: 120 KVKHAPSRDE---IPTLANEQMVVEYYSK 145


>gi|32401870|gb|AAP80923.1| small ribosomal protein 4 [Sequoia sempervirens]
          Length = 170

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 9/162 (5%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++L+ KQ+++ +YG ++E++     + A R++G T   L+  LE RLD I++R     +I
Sbjct: 11  VRLKEKQRLRFHYG-LAERQLLQYVRIAKRAKGSTGQVLLQLLEMRLDNILFRLGMALSI 69

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPE 166
             ARQ VNHRH+LVN R V+I SYRCK  D I +K K +    + +     ++D   VP 
Sbjct: 70  PEARQLVNHRHILVNDRIVDIPSYRCKPQDFISIKDKQRLRNIINKNIDNFKKDKMRVPP 129

Query: 167 YISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++ +            +I  + +     + +   LVVE+YSR
Sbjct: 130 HLKLIKKKTQYSGLVHKIIDNSR---IGLKINELLVVEYYSR 168


>gi|212004193|gb|ACJ15405.1| Rps4 [Pellaea ternifolia]
          Length = 186

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 19  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYIRIARKTRGSTGQVPLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 78  VIFQLGMTSTIPAARQLVSHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVKV-ES 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 137 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184


>gi|306773470|emb|CBJ55311.1| putative ribosomal protein small subunit 4 [Cyathea poeppigii]
 gi|306773480|emb|CBJ55316.1| putative ribosomal protein small subunit 4 [Sphaeropteris glauca]
 gi|306773488|emb|CBJ55320.1| putative ribosomal protein small subunit 4 [Sphaeropteris robusta]
          Length = 160

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+        K                     S F ++L AKQ+++  YG ++E+  
Sbjct: 1   VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V++
Sbjct: 40  LRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDV 99

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
            SYRCK  D+I V                   ++P++++ +   +     RI        
Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRES 141

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 142 IDLNINELLVVEYYSR 157


>gi|16930550|gb|AAL31956.1| ribosomal protein small subunit 4 [Onoclea sensibilis]
          Length = 191

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 24  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVPLQPLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ +     + L    
Sbjct: 83  VIFHLGMASTIPAARQLVNHRHILVNSRVVDIPSYRCKPRDIITVRNRPTSCNA-LRGES 141

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++      D       R+          + +   LVVE+Y R
Sbjct: 142 LGGDKTPDHLTASISEGDRPTGLVNRV---ASRESVNLNINELLVVEYYPR 189


>gi|290467479|gb|ADD25857.1| small ribosomal protein 4 [Hymenophyllum plicatum]
          Length = 186

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG  +E+      + A +++G T   L+  LE RLD 
Sbjct: 17  QSSSKKVSQFCVRLEAKQRLRFNYGS-TERPLLKYVRVARKTKGSTGQVLLPLLEMRLDN 75

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           IV++     TI AARQ VNHR +LVN   V+I SYRCK  D+I ++ +S   +   +  +
Sbjct: 76  IVFQLGMSTTIPAARQLVNHRPILVNNNIVDIPSYRCKPKDLITLRNRSSSYSGSNKNIE 135

Query: 159 LAE-RDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +  + +P++++ +             I          + +   LVVE+YSR
Sbjct: 136 FSRIKKIPDHLTFSFSEGNIPKGLVNGI---ANRESINLNINELLVVEYYSR 184


>gi|118724501|gb|ABL10824.1| ribosomal protein small subunit 4 [Notholaena affinis]
          Length = 192

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 25  QSVSKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 83

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ V+HRH+LVN   V+I SYR K  D+I ++ +     +      
Sbjct: 84  VIFQLGLASTIPAARQLVSHRHILVNRHIVDIPSYRRKPKDIITIRNRPTSYNAAK-GKS 142

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L   ++P++++++             +          + +   LVVE++SR
Sbjct: 143 LGRDEIPDHLTLSISKTNETTGLVNHM---ANRESVNLDINELLVVEYHSR 190


>gi|16565363|gb|AAL26200.1|AF313593_1 small ribosomal protein 4 [Tmesipteris obliqua]
          Length = 234

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 51/239 (21%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHG----------------------------- 38
           + KI RR+  +L G  K  + T                                      
Sbjct: 1   RLKIIRRLN-SLPGLTKKKLKTDRVESNQSKDESNQSKDESNQSKVKSNQSKVKSNQSKM 59

Query: 39  --------------QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
                         Q    K S + ++L AKQ+++  YG ++E++       A ++RG T
Sbjct: 60  ESNQSKAESDQSIFQSTSRKRSQYSIRLEAKQRLRFNYG-LTERQLLKYVYIAKKARGST 118

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              L+  LE RLD I++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D+I V+
Sbjct: 119 GQVLLQLLEMRLDNIIFRLGMSPTIPGARQLVNHRHILVNDHIVDIPSYRCKPNDIITVR 178

Query: 145 QKSKQLASVLEASQLAERDVPEYIS---VNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
                   + +    +  ++P +++   +          +I          + +   LV
Sbjct: 179 DHKNSQELIKKNMISSIDEIPNHLNLSYLEETKPKGLINQIVDR---ESIGLEINELLV 234


>gi|212004217|gb|ACJ15417.1| Rps4 [Paragymnopteris marantae]
          Length = 189

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 22  QPASKKISPFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 80

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 81  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 139

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VP++++++             +          + +   LVVE++SR
Sbjct: 140 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 187


>gi|99639980|emb|CAJ45133.1| putative ribosomal protein S4 gene [Culcita macrocarpa]
          Length = 171

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 10/173 (5%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E+  R   + A +++G T    +  LE RLD 
Sbjct: 2   QSASRKISQFCVRLEAKQRLRFNYG-LTERLLR-YVRIARKTKGSTGQVPLQLLEMRLDN 59

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           I++ +    TI AARQ VNHRH+LVN R V+I SYRCK  D+I V+ +            
Sbjct: 60  IIFHSGMTSTIPAARQLVNHRHILVNDRIVDIPSYRCKPKDIITVRDRPTSCNGPRSGIN 119

Query: 159 LAER--DVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            + R    P+++++     +       RI          + +  +LVVE+YSR
Sbjct: 120 ESSRGDKTPDHLTLSLSEDNRPKGLVNRI---ANRESIELNINESLVVEYYSR 169


>gi|212004211|gb|ACJ15414.1| Rps4 [Paragymnopteris marantae]
          Length = 188

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 21  QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 79

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 80  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 138

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VP++++++             +          + +   LVVE++SR
Sbjct: 139 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 186


>gi|59803318|gb|AAX07767.1| Rps4 [Symphyogyna brongniartii]
          Length = 153

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             KQK   +YG ++E++     + A  ++G T   L+  LE RLD IV+R    PTI  A
Sbjct: 1   EEKQKXXFHYG-LTERQLLKYVRIARGAKGSTGQILLQLLEMRLDNIVFRLGMAPTISGA 59

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVN 171
           RQ VNHRH+++N  +++I SY CK  DVI ++ + +  + + +   L  ER +P +++ +
Sbjct: 60  RQLVNHRHIIINDDTIDIPSYNCKPQDVITIRDRRESQSVITQNISLFRERRIPNHLTFD 119

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 +  +I          + +   LVVE+YSR
Sbjct: 120 STRFCGSVNQIIDR---EWIGLKINELLVVEYYSR 151


>gi|212004219|gb|ACJ15418.1| Rps4 [Paragymnopteris marantae]
          Length = 186

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 19  QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 77

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 78  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 136

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VP++++++             +          + +   LVVE++SR
Sbjct: 137 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 184


>gi|309798830|ref|ZP_07693093.1| 30S ribosomal protein S4 [Streptococcus infantis SK1302]
 gi|308117556|gb|EFO54969.1| 30S ribosomal protein S4 [Streptococcus infantis SK1302]
          Length = 133

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 4/122 (3%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
             N +  LE RLD +VYR     T   ARQFVNH H+LV+G+ V+I SYR   G VI V+
Sbjct: 14  GFNFMLLLERRLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVR 73

Query: 145 QKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           +KS ++ ++LEA + A    P ++S + + +  +  R+P   +       +   LVVEFY
Sbjct: 74  EKSLKVPAILEAVE-ATLGRPAFVSFDAEKLEGSLTRLPERDE---INPEINEALVVEFY 129

Query: 205 SR 206
           ++
Sbjct: 130 NK 131


>gi|25986665|gb|AAN52769.1| ribosomal protein small subunit 4 [Gymnogrammitis dareiformis]
          Length = 181

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 8/172 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 12  QPASRKISQFCVRLEAKQRLRFNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 70

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-LASVLEAS 157
           +++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     A  L   
Sbjct: 71  VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALTLRNK 130

Query: 158 QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  P+++++     +        +          + +   +VVE+YSR
Sbjct: 131 FTGGDKTPDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELVVVEYYSR 179


>gi|212004215|gb|ACJ15416.1| Rps4 [Paragymnopteris marantae]
          Length = 187

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|306773468|emb|CBJ55310.1| putative ribosomal protein small subunit 4 [Cyathea multiflora]
          Length = 160

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+        K                     S F ++L AKQ+++  YG ++E+  
Sbjct: 1   VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V++
Sbjct: 40  LRYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDV 99

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
            SYRCK  D+I V                   ++P++++ +   +     RI        
Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVDRI---ANRES 141

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 142 IDLNINELLVVEYYSR 157


>gi|306773476|emb|CBJ55314.1| putative ribosomal protein small subunit 4 [Sphaeropteris capitata]
          Length = 151

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 19/164 (11%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG ++E+      + A +++G T    +  LE RLD I++ 
Sbjct: 4   RKISQFCVRLEAKQRLRFNYG-LTERXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFH 62

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           +    TI AARQ VNHRH+LVN R V++ SYRCK  D+I V                   
Sbjct: 63  SGMASTIPAARQLVNHRHILVNDRIVDVPSYRCKPKDIITV-------------ESSRGD 109

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++ +   +     RI          + +   LVVE+YSR
Sbjct: 110 EIPDHLTFSL--LEGLVNRI---ANRESINLNINELLVVEYYSR 148


>gi|212004213|gb|ACJ15415.1| Rps4 [Paragymnopteris marantae]
          Length = 187

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QPASKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|32401872|gb|AAP80924.1| small ribosomal protein 4 [Sequoiadendron giganteum]
          Length = 196

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
             R+        K+P   RS  P      +  KPS + ++L+ KQ+++ +YG ++E++  
Sbjct: 1   INRLKTLPGLSKKTP--NRSEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RLD I++R     +I  ARQ VNHRH+L N R V+I 
Sbjct: 58  QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALSIPEARQLVNHRHILXNNRIVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSL 186
           SYRCK  D I +K K +    +       ++D   VP ++++            +I  + 
Sbjct: 118 SYRCKPQDFISIKDKQRLRNIININIDNFQKDKMRVPPHLNLIKKKSQYSGLVKKIIDNS 177

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
           +     + +   LVVE+YSR
Sbjct: 178 R---IGLKINELLVVEYYSR 194


>gi|306773482|emb|CBJ55317.1| putative ribosomal protein small subunit 4 [Sphaeropteris horrida]
          Length = 159

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 39/195 (20%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+        K                     S F ++L AKQ+++  YG ++E+   
Sbjct: 1   IRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXLL 39

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V++ 
Sbjct: 40  RYVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDVP 99

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SYRCK  D+I V                   ++P++++ +   +     RI         
Sbjct: 100 SYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRESI 141

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 142 DLNINELLVVEYYSR 156


>gi|170516233|gb|ACB15118.1| small ribosomal protein 4 [Acmopyle pancheri]
          Length = 222

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 45/232 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+  NL G  K     R           K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLK-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR 
Sbjct: 49  RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRM 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------- 162
           V+I SYRC   DVI +K + +    + +   L+++                         
Sbjct: 109 VDIPSYRCNPKDVITIKDQKRSRNIINKNIDLSKKHKERSRLISKRIINQKMILFFRFKK 168

Query: 163 -----DVPEYISVNHDNMVATFVR---IPSSLKDVPYPVIMQPNLVVEFYSR 206
                 VP +++++             +   +      + +   LV+E++SR
Sbjct: 169 HFMKHKVPFHLTLDSSQYKGVVKYKGVVNRIIDSTGIGLNINELLVIEYFSR 220


>gi|322517735|ref|ZP_08070593.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124]
 gi|322123628|gb|EFX95225.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124]
          Length = 166

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 3/120 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 45  MSRYTGPSWKQARRLGFSLTGTGKE-LARRNYIPGQHGPNNRSKLSEYGLQLAEKQKLRF 103

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
            YG + EK+FR++F +A + +G T   NL+  LE RLD +VYR     T   ARQFVNH 
Sbjct: 104 TYG-VGEKQFRNLFVQATKVKGGTLGFNLMLLLERRLDNVVYRLGLATTRHQARQFVNHG 162


>gi|118724397|gb|ABL10772.1| ribosomal protein small subunit 4 [Paragymnopteris marantae]
          Length = 190

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 8/166 (4%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD ++++ 
Sbjct: 28  KISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDNVIFQL 86

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
             V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V          
Sbjct: 87  GMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IESFGRDQ 145

Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VP++++++             +          + +   LVVE++SR
Sbjct: 146 VPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 188


>gi|42794646|gb|AAS45720.1| Rps4 [Diogenesia racemosa]
          Length = 211

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 11/166 (6%)

Query: 48  FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107
           +   L+ KQK++ + G ++E++     + A +++G     L+  LE  LD I++R     
Sbjct: 46  YHXCLQKKQKLRFHNG-LTERQLLKYVRIAGKAKGSPGQVLLQLLEMGLDNILFRLGMAS 104

Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ--LASVLEASQLAERD-- 163
           TI  ARQ VNHRHVLVNGR ++I SYRCK  D+I  ++KS+     S      L  R   
Sbjct: 105 TIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIITAREKSRALIQNSFQNLFDLPSRKGK 164

Query: 164 ---VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              VP ++++N         +I ++       + ++  LVVE+YSR
Sbjct: 165 RKRVPYHLTLNRGQYKGLVKQIINTK---WVGLKIKELLVVEYYSR 207


>gi|212004209|gb|ACJ15413.1| Rps4 [Paragymnopteris marantae]
          Length = 187

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 20  QPXLKKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARKTRGSTGQVPLQLLEMRLDN 78

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++   V TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +V     
Sbjct: 79  VIFQLGMVSTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRPTSYNAVK-IES 137

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                VP++++++             +          + +   LVVE++SR
Sbjct: 138 FGRDQVPDHLTLSISKANEPTGLVNHM---ANRESVNLDINELLVVEYHSR 185


>gi|117306746|emb|CAH73341.1| ribosomal protein S4 [Lepyrodon tomentosus]
          Length = 177

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 8/184 (4%)

Query: 20  WGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR 79
               K+P    S    ++      K S + ++L  KQK++ +YG I+E++  +  + A R
Sbjct: 1   GLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRTARR 56

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           ++G T   L+   E RLD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D
Sbjct: 57  AKGSTGEVLLQLPEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDCMVDIPSYRCKPQD 116

Query: 140 VIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            I +K + K  A + +  +  ++  +P +++ +         +I   L      + +   
Sbjct: 117 FITIKNQRKSEAIISKNIEFYQKSKIPNHLTYSSLEKKGLVNQI---LDRESIGLKIXXX 173

Query: 199 LVVE 202
            VVE
Sbjct: 174 XVVE 177


>gi|190361235|gb|ACE76922.1| ribosomal protein small subunit 4 [Crepidomanes bipunctatum]
          Length = 167

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 18/166 (10%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S F ++L AKQ+++  YG  +E++     + A R++G T   L+  LE RLD IV+  
Sbjct: 15  KVSQFRVRLEAKQRLRFNYGS-TERQLLRYVRIARRAKGSTGQVLLQLLEMRLDNIVFNL 73

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
           +  PTI AARQ VNHRH+LVN R V+I SYRCK  D+I +K             +  E+ 
Sbjct: 74  RMAPTIRAARQLVNHRHILVNNRLVDIPSYRCKPKDLITLK-----------NREFLEKK 122

Query: 164 VPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VP+++++              I +        + +   LVVE+YSR
Sbjct: 123 VPDHLALSFSESKEPKGLVNGIVNR---ESIDLNINELLVVEYYSR 165


>gi|15145826|gb|AAK83531.1| rps4 [Splachnum pensylvanicum]
          Length = 172

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 5/173 (2%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G  L G     +  +S         +K   S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGA-LPGLTNKTLQLKSSPINQSISNKK--ISQYRIRLEEKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A  ++G T   L+  LE RLD I++R    PTI  ARQ VNHRH+LVN R V+I SY
Sbjct: 57  VRIARHAKGSTGEVLLQLLEMRLDNIIFRLGMAPTIPGARQLVNHRHILVNERIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSS 185
           RCK  D I +K + K    + +  +  ++  +P ++  N         +I   
Sbjct: 117 RCKPQDFITIKNRQKSQVIISKNIEFYQKYKIPNHLVYNSLKKEGLVTQILDR 169


>gi|118724477|gb|ABL10812.1| ribosomal protein small subunit 4 [Cheilanthes lendigera]
          Length = 181

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 11/166 (6%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD ++++ 
Sbjct: 22  KISQFCVRLEAKQRLRLNYG-LTERQLLKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQL 80

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
               TI AARQ V+HRH+LVN R V+I SYRCK  D+I ++ ++        A +    +
Sbjct: 81  NMASTIPAARQLVSHRHILVNRRIVDIPSYRCKPKDIITIRNRTTSY----NAVKGGRDE 136

Query: 164 VPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VP++++++             +          + +   LVVE++SR
Sbjct: 137 VPDHLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 179


>gi|306773486|emb|CBJ55319.1| putative ribosomal protein small subunit 4 [Sphaeropteris polypoda]
          Length = 150

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 19/164 (11%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG ++E+      + A +++G T    +  LE RLD I++ 
Sbjct: 3   RKISQFCVRLEAKQRLRFNYG-LTERXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFH 61

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           +    TI AARQ VNHRH+LVN R V++ SYRCK  D+I V                   
Sbjct: 62  SGMASTIPAARQLVNHRHILVNDRIVDVPSYRCKPKDIITV-------------ESSRGD 108

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++ +   +     RI          + +   LVVE+YSR
Sbjct: 109 EIPDHLTFSL--LEGLVNRI---ANRESINLNINELLVVEYYSR 147


>gi|118724493|gb|ABL10820.1| ribosomal protein small subunit 4 [Cheilanthes viridis]
          Length = 191

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++  +  + A R+RG T    +  LE RLD 
Sbjct: 24  QSASKKISQFCVRLEAKQRLRLNYG-LTERQLLNYVRIARRTRGSTGQVPLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I SYR K  D+I ++ +     +      
Sbjct: 83  VIFQLGMASTIPAARQLVNHRHILVNRRIVDIPSYRRKPKDIITIRNRLTSYNAAK-GKS 141

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP+Y++++             +          + +   LVVE++SR
Sbjct: 142 FGRDEVPDYLTLSISKTSEPTGLVNHM---ANRESVNLDINELLVVEYHSR 189


>gi|32401878|gb|AAP80927.1| small ribosomal protein 4 [Taxodium distichum]
          Length = 193

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 10/193 (5%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N R+  P      +  KPS + ++L+ KQ+++ +YG ++E++     + A 
Sbjct: 4   LPGLSKKTPN-RTEQPSKKKHSKPPKPSKYPVRLKEKQRLRFHYG-LTERQLLQYVRIAR 61

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R V+I SYRCK  
Sbjct: 62  RAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRIVDIPSYRCKPQ 121

Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPSSLKDVPYPV 193
           D I +K K +    +     + ++D   VP +++             +I  + +     +
Sbjct: 122 DFISIKDKQRLRDRINNNIDIFQKDKMRVPPHLNRIKKKSQYSGLVKKIIDNNR---IGL 178

Query: 194 IMQPNLVVEFYSR 206
            +   LV E+YSR
Sbjct: 179 KINELLVXEYYSR 191


>gi|16930552|gb|AAL31957.1| ribosomal protein small subunit 4 [Onocleopsis hintonii]
          Length = 170

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F  +L AKQ+++  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 3   QSASRKISQFCGRLEAKQRLRFNYG-LTERQPLKYVRIARKTRGSTGQVPLQLLEMRLDN 61

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN R V+I SYRCK  D+   + +     + L    
Sbjct: 62  VIFHLGMASTIPAARQLVNHRHILVNSRVVDIPSYRCKPKDITTARNRPTSCNA-LRGES 120

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           L     P++++      +       R+          + +   LVVE+Y R
Sbjct: 121 LGGDKTPDHLTASISEGNGPXGLVNRV---ANRESINLNINEXLVVEYYPR 168


>gi|51860523|gb|AAU11398.1| ribosomal protein small subunit 4 [Ephedra viridis]
          Length = 185

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 14/191 (7%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
             K P   +     +H   R   K S   + L+ KQK++ +YG ++E++ R     A  +
Sbjct: 1   TSKRPKYKKR----VHRSSRPWWKKSQCLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNA 55

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN   V+I SYRCK  D+
Sbjct: 56  QGSTGQVLLQLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDI 115

Query: 141 IEVKQKSKQLASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
           I +K K  +   +       +       VP Y++ N         +I  +       + +
Sbjct: 116 ITLKGKDPERLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKI 172

Query: 196 QPNLVVEFYSR 206
           +  LV+E+YSR
Sbjct: 173 KEMLVIEYYSR 183


>gi|42541369|gb|AAS19535.1| ribosomal protein small subunit 4 [Selliguea heterocarpa]
          Length = 189

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q    + S F ++L AK +++  YG ++E++     + A ++RG T   L+  LE RLD
Sbjct: 21  NQPVSKRISQFCVRLEAKHRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLD 79

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
            +++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     ++ +  
Sbjct: 80  NVIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRKKF 139

Query: 158 QLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              ++  P+++++     +        +          + +   LVVE+YSR
Sbjct: 140 TGGDKT-PDHLTISLSEDNKPTGLVNCV---ANRESVNLNINELLVVEYYSR 187


>gi|157272419|gb|ABV27024.1| ribosomal protein small subunit 4-like protein [Azolla nilotica]
          Length = 173

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 10/173 (5%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
               K S F ++L AKQK++  YG ++E++     + A +++G T    +  LE RLD I
Sbjct: 3   STPKKISQFCVRLEAKQKLRYNYG-LTERQLLRYVRIARKTKGSTGQVPLQLLEMRLDNI 61

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE---A 156
           +Y     PTI AARQ VNHRH+LVN R V++ SYRCK  D+I V+ +   L  V      
Sbjct: 62  IYHLGMSPTIPAARQPVNHRHILVNDRIVDVPSYRCKSKDIITVRNRPTSLNGVKRTGII 121

Query: 157 SQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +P++++      +       +  +        + +    VVE+YSR
Sbjct: 122 ESSRGSQIPDHLTFSLSEDNRPKGLVNKTATR---ESIDLNINELSVVEYYSR 171


>gi|32401832|gb|AAP80904.1| small ribosomal protein 4 [Ephedra chilensis]
          Length = 180

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 10/182 (5%)

Query: 31  SYGPGLHGQRRKS-KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89
            Y   +H   R   K S + + L+ KQK++ +YG ++E++ R     A  ++G T   L+
Sbjct: 1   KYKKRVHRSSRPWWKKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLL 59

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             LE RLD I++R     TI  ARQ VNHRH+LVN   V+I SYRCK  D+I +K K  +
Sbjct: 60  QLLEMRLDNILFRLGIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPE 119

Query: 150 LASVLEASQLAE-----RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
              +       +       VP Y++ N         +I  +       + ++  LV+E+Y
Sbjct: 120 RLRIRMKKSWGQLWKNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEMLVIEYY 176

Query: 205 SR 206
           SR
Sbjct: 177 SR 178


>gi|170516241|gb|ACB15122.1| small ribosomal protein 4 [Papuacedrus papuana]
          Length = 198

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 11/203 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+   L G  K   N        H   +  KPS + ++L+ KQ+++ +YG + E
Sbjct: 1   RLKIINRLKT-LPGLSKKTPNRIEKTRKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LPE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKS--KQLASVLEASQLAERDVPEYISVNHDNM--VATFVRIP 183
           V+I SYRCK  D+I +K+K   +   ++L +++     VP +++             +I 
Sbjct: 117 VDIPSYRCKPQDLISIKKKQGLRINKNILISTKDNRMRVPPHLNRIKKKFQYSGLVKKII 176

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
            +       + +   LVV +YSR
Sbjct: 177 DNKYR---GLKINELLVVGYYSR 196


>gi|42541371|gb|AAS19536.1| ribosomal protein small subunit 4 [Selliguea subsparsa]
          Length = 189

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 8/163 (4%)

Query: 47  YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
            F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD +++   F 
Sbjct: 30  QFXVRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDNVIFHLGFA 88

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE 166
            T+ AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++       ++  P+
Sbjct: 89  STVPAARQLVNHRHILVNSYVVDIPSYRCKPKDIITVRNRPTSYNALRNKFTGGDKT-PD 147

Query: 167 YISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++++     +        + +        + +   L VE+YSR
Sbjct: 148 HLTISLSEDNKPAGLVNCVVNR---ESVDLNINEMLDVEYYSR 187


>gi|32879553|emb|CAE11887.1| ribosomal protein S4 [Devia xeromorpha]
          Length = 151

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG ++E++       A +++G T   L+  LE RLD I++R 
Sbjct: 1   KRSQYRIRLEEKQKLRFHYG-LTERQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA--E 161
               TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I    K +  A +      +  +
Sbjct: 60  GMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITTNNKQRSKALIQNFIASSPHQ 119

Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            ++P +++++         +I  S       + + 
Sbjct: 120 EELPNHLTIDPFQYKGLVNQIIDSK---WIGLKIN 151


>gi|306773484|emb|CBJ55318.1| putative ribosomal protein small subunit 4 [Sphaeropteris
           megalosora]
          Length = 148

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 19/164 (11%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG ++E+      + A +++G T    +  LE RLD I++ 
Sbjct: 1   RKISQFCVRLEAKQRLRFNYG-LTERXLLRYVRIARKTKGSTGQVPLQLLEMRLDNIIFH 59

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           +    TI AARQ VNHRH+LVN R V++ SYRCK  D+I V                   
Sbjct: 60  SGMASTIPAARQLVNHRHILVNDRIVDVPSYRCKPKDIITV-------------ESSRGD 106

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++P++++ +   +     RI          + +   LVVE+YSR
Sbjct: 107 EIPDHLTFSL--LEGLVNRI---ANRESINLNINELLVVEYYSR 145


>gi|190361223|gb|ACE76916.1| ribosomal protein small subunit 4 [Hymenophyllum tunbrigense]
          Length = 167

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD IV++
Sbjct: 14  RKVSQFCVRLEAKQRLRFNYGS-TERQLLKYVRVARKAKGSTGQILLQLLEMRLDNIVFQ 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           +    TI AARQ VNHRH+ VN   V+I SYRCK  D+I V+               + +
Sbjct: 73  SGMSATIPAARQLVNHRHIWVNNHIVDIPSYRCKPKDLITVR-----------NRGFSRK 121

Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P++++ +             I          + +   LVVE+YSR
Sbjct: 122 KIPDHLTFSFSEDNIPKGLVNGI---ANRESIDLNINELLVVEYYSR 165


>gi|51458107|gb|AAU03405.1| ribosomal protein small subunit 4 [Asplenium fissum]
          Length = 180

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 8/170 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 16  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++ + S 
Sbjct: 75  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPTSCNALRDKSL 134

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
           + ++  P++++V     D       R+ +        + +    VV +YS
Sbjct: 135 VGDKT-PDHLTVSLLEGDRPTGXANRVXNR---ESINLTINELXVVGYYS 180


>gi|42794704|gb|AAS45747.1| Rps4 [Symphysia racemosa]
          Length = 142

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +    + K  RR+G       K P    S       +  K K S + ++L+ KQK++ 
Sbjct: 1   MXRYRGPRFKKIRRLGALPGLTNKKPKPRNSRRT--QSRXGKKKKSQYHIRLQEKQKLRF 58

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++     + A +++G T   L+  LE RLD I++R     TI  ARQ VNHRH
Sbjct: 59  HYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRH 117

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQ 145
           VLVNGR ++I SYRCK  D+I  ++
Sbjct: 118 VLVNGRIIDIPSYRCKPRDIITARK 142


>gi|306773450|emb|CBJ55301.1| putative ribosomal protein small subunit 4 [Cyathea dregei]
          Length = 160

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+        K                     S F ++L AKQ+++  YG ++E+  
Sbjct: 1   VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V++
Sbjct: 40  LRYVRIARKTKGSTGQVPLQLLEMRLDNILFHSGMTSTIPAARQLVNHRHILVNDRIVDV 99

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
            SYRCK  D+I V                   ++P++++ +   +     RI        
Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRES 141

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 142 IDLNINELLVVEYYSR 157


>gi|56070065|gb|AAV70693.1| ribosomal protein 4 [Gnetum parvifolium]
 gi|56070067|gb|AAV70694.1| ribosomal protein 4 [Gnetum indicum]
 gi|56070069|gb|AAV70695.1| ribosomal protein 4 [Gnetum montanum]
          Length = 160

 Score =  125 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 7/156 (4%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L+ KQK++ ++G ++E++ R   +   + +G T   L+  LE RLD I+YR     TI  
Sbjct: 9   LQEKQKIRFHFG-LTERQLRQYVQITKKVQGSTGQVLLQLLEMRLDNILYRLGLAGTIPG 67

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYI 168
           ARQ VNHRH+LVN   VNI SY+CK  DVI +K K       +     ++  E  +P ++
Sbjct: 68  ARQLVNHRHILVNDHVVNIPSYQCKPQDVITIKGKKTDQLKTIITRNRNKARENKIPYHL 127

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           +++         +I          + ++  LV+E+Y
Sbjct: 128 TLDLSQNKGIVNKIIDRKD---IQLNIKEMLVIEYY 160


>gi|37548851|gb|AAO32694.1| ribosomal protein 4 [Pogonatum aloides]
          Length = 157

 Score =  125 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 5/161 (3%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K+P     Y   ++      K S + ++L  KQK++ +YG  +E++   
Sbjct: 1   RRLGALPGLTXKTPQXKSXY---INRSTSNKKVSQYRIRLEEKQKLRFHYGX-TERQLLX 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGQVLLQLLEMRLDNXIFRLGMAPTIPGARQLVNHRHILVNDAIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           Y  + GD I V+++    A + +    + +  +P +++ + 
Sbjct: 117 YXXEPGDFITVRKRXXSQAIIXKNXDXSXKYKIPNHLTFDS 157


>gi|306773460|emb|CBJ55306.1| putative ribosomal protein small subunit 4 [Alsophila stelligera]
          Length = 160

 Score =  124 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+        K                     S F ++L AKQ+++  YG ++E+  
Sbjct: 1   VIRRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXL 39

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V++
Sbjct: 40  LRYVRIARKTKGSTGQVSLQLLEMRLDNIIFHSGMTSTIPAARQLVNHRHILVNDRIVDV 99

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
            SYRCK  D+I V                   ++P++++ +   +     RI        
Sbjct: 100 PSYRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVNRI---ANRES 141

Query: 191 YPVIMQPNLVVEFYSR 206
             + +   LVVE+YSR
Sbjct: 142 IDLNINELLVVEYYSR 157


>gi|157272431|gb|ABV27030.1| ribosomal protein small subunit 4-like protein [Salvinia minima]
          Length = 169

 Score =  124 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S F ++L AKQ+++  YG ++E++     + A +++G T    +  LE RLD I++
Sbjct: 1   PKKISQFCVRLEAKQRLRYNYG-LTERQLLRYVRIARKTKGSTGQVSLQLLEMRLDNIIF 59

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA---SQ 158
                PTI AARQ VNHRH+LVN R V++ SYRCK  D I V+ +   + S   +     
Sbjct: 60  HLGMAPTIPAARQSVNHRHILVNDRIVDVPSYRCKPRDTITVRNRPTSINSSKRSDIVES 119

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                +P+++++     +       +  +        + +    VVE+YSR
Sbjct: 120 SRGNLIPDHLTLSFSEDNRPKGLVNQTATR---ESIDLNINELSVVEYYSR 167


>gi|306773464|emb|CBJ55308.1| putative ribosomal protein small subunit 4 [Cyathea horrida]
          Length = 158

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 39/194 (20%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+        K                     S F ++L AKQ+++  YG ++E+    
Sbjct: 1   RRLKNLPGLTRK--------------------ISQFCVRLEAKQRLRFNYG-LTERXLLR 39

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V++ S
Sbjct: 40  YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIVDVPS 99

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
           YRCK  D+I V                   ++P++++ +   +     RI          
Sbjct: 100 YRCKPKDIITV-------------ESSRGDEIPDHLTFSL--LKGLVDRI---ANRESID 141

Query: 193 VIMQPNLVVEFYSR 206
           + +   LVVE+YSR
Sbjct: 142 LNINELLVVEYYSR 155


>gi|157689464|gb|ABV65288.1| ribosomal protein S4 [Drypetes roxburghii]
          Length = 186

 Score =  124 bits (311), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 19/178 (10%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           + S + ++L+ KQ+++ +YG ++E++  +  + A +++G+    L+  LE RLD I++R 
Sbjct: 9   RTSEYSIRLKEKQRLRFHYG-LTERQLLTYVRIAAKAKGEKGPVLLQLLEMRLDNILFRL 67

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
               TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I  K + K  A +        R 
Sbjct: 68  GMASTIPQARQLVNHRHILVNGRIVDIPSYRCKPRDIITAKDEQKSRAMIQNYLSSYPRK 127

Query: 163 --------------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                          +P+++++          ++  S       + +    V+E+YSR
Sbjct: 128 KASYPRKKDPQKEEKLPKHLTLYPLEYKGLVNQVIDSD---CVGLKINQLRVIEYYSR 182


>gi|170516243|gb|ACB15123.1| small ribosomal protein 4 [Pilgerodendron uviferum]
          Length = 194

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 11/201 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+  +L G  K   N        H   +  KPS + ++L+ KQ+++ +YG ++E
Sbjct: 1   RLKIINRLK-SLPGLSKKTPNIIEKTRKKH--FKPLKPSKYPVRLKEKQRLRFHYG-LAE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVN R 
Sbjct: 57  RQLLQYVRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNDRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV--ATFVRIPSS 185
           V+I SYRCK  D+I +K   KQ   + +  +     VP +++     +       +I  +
Sbjct: 117 VDIPSYRCKPQDLISIKD--KQGLRINQNIKDKIMRVPPHLNRIKKKLQYNGLVKKIIDN 174

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
                  + +   LVV +YSR
Sbjct: 175 K---YLGLKINELLVVGYYSR 192


>gi|190361267|gb|ACE76938.1| ribosomal protein small subunit 4 [Crepidomanes thysanostomum]
          Length = 167

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 18/166 (10%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S F ++L AKQ+++  YG  +E++     + A R++G T   L+  L+ RLD IV+  
Sbjct: 15  KVSQFRVRLEAKQRLRFNYGS-TERQLLRYVRIARRAKGSTGQILLQLLQMRLDNIVFNL 73

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
           +  PTI AARQ VNHRH+LVN R V+I SYRCK  D+I +K             +  E+ 
Sbjct: 74  QMAPTIRAARQLVNHRHILVNNRVVDIPSYRCKPKDIITLK-----------NREFLEKK 122

Query: 164 VPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           VP+++++    ++        I          + +   L+VE+YSR
Sbjct: 123 VPDHLTLSFSENNRPKGLVNGI---ASRESIDLKINELLIVEYYSR 165


>gi|32401850|gb|AAP80913.1| small ribosomal protein 4 [Lepidothamnus intermedius]
          Length = 206

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 34/197 (17%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
           R K K S + ++L  KQK++ +YG +++++     + A R++G T   L+  LE RLD I
Sbjct: 12  REKEKKSRYRIRLEEKQKLRFHYG-LTDRQLLQYVRIARRAKGSTGQVLLQLLEMRLDNI 70

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVN R V+I SYRCK  DVI +K + +    + +   L
Sbjct: 71  LFRLGMASTIPGARQLVNHRHILVNDRMVDIPSYRCKPKDVIAIKDQQRSRNIINKNIDL 130

Query: 160 AER------------------------------DVPEYISVNHDNMVATFVRIPSSLKDV 189
           +++                               VP +++ +         RI  S +  
Sbjct: 131 SKKHQEISRLISKRIIKRKKILFFLFKKHEMKHKVPFHLTFDSSQYKGVVNRIIDSTR-- 188

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LV+E++SR
Sbjct: 189 -IGLSINELLVIEYFSR 204


>gi|42541373|gb|AAS19537.1| ribosomal protein small subunit 4 [Polypodiopteris brachypoda]
          Length = 189

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A ++RG T   L+  LE RLD 
Sbjct: 24  QPASRKISQFCVRLEAKQRLRLNYG-LTERQLLKYVRVARKARGSTGQVLLQLLEMRLDN 82

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      T+ AARQ VNHRH+LVN   VNI SYRCK  D+I V+ +     ++     
Sbjct: 83  VIFHLGLASTVPAARQLVNHRHILVNSYVVNIPSYRCKPKDIITVRNRPTSYNALRNKFT 142

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
             ++  P+++++     D        +          + +   LVVE+Y
Sbjct: 143 GGDKT-PDHLTISLSEDDKPTGLVNCV---ANRESVNLNINELLVVEYY 187


>gi|51458078|gb|AAU03392.1| ribosomal protein small subunit 4 [Asplenium auritum]
          Length = 193

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG +SE++     + A ++RG T    +  LE RLD 
Sbjct: 30  QSTSRKISQFCVRLEAKQRLRFNYG-LSERQLLRYVRIARKTRGSTGQVSLQLLEMRLDN 88

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN    +I SYRC   D+I V+ +     + L+   
Sbjct: 89  VLFQLGMASTIPAARQLVNHRHILVNNWIADIPSYRCNPKDIITVRNRPTSCNA-LKNRS 147

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
                 P++++V     D    +  R+ +        + +   LV E+Y
Sbjct: 148 FVGYKTPDHLTVSLSEGDKPTGSANRVGNR---ESINLNINELLVGEYY 193


>gi|107770440|gb|ABF83761.1| small ribosomal protein 4 [Dacrycarpus imbricatus]
 gi|170516245|gb|ACB15124.1| small ribosomal protein 4 [Dacrycarpus imbricatus]
          Length = 207

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 38/207 (18%)

Query: 34  PGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89
           PGL   RR    K K S + ++L  KQK++ +YG +++++     + A R++G T   L+
Sbjct: 3   PGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGSTGQVLL 61

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC   DVI +K + + 
Sbjct: 62  QLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITIKDRQRS 121

Query: 150 LASVLEASQLAER------------------------------DVPEYISVNHDNMVATF 179
              + +   L+++                               VP +++++        
Sbjct: 122 RNIINKNIDLSKKHQERSRLISKRIINRKFILFFRFKKYFMKHTVPFHLTLDSSRYKGVV 181

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI  S       + +   LV+E++SR
Sbjct: 182 NRIIDST---GIGLNINELLVIEYFSR 205


>gi|32401896|gb|AAP80936.1| small ribosomal protein 4 [Juniperus communis]
          Length = 194

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 11/198 (5%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+        K+P   R   P      +  K S + ++L+ KQ+++ +YG + +++    
Sbjct: 1   RLKTLPGLSKKTP--NRIQKPIKKKHSKPLKSSQYPVRLKEKQRLRFHYG-LPKRQLLQY 57

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 58  VRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVNGRIVDIPSY 117

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSSLKD 188
           RCK  D I +K+K      + +  ++ ++D   VP +++             +I  + + 
Sbjct: 118 RCKPQDFISIKEKQGLRNRMKKNREIFQKDKMRVPPHLNRIKQKSQYSGLVKKIIDNKR- 176

Query: 189 VPYPVIMQPNLVVEFYSR 206
               + +   LVV++YSR
Sbjct: 177 --IGLKINELLVVKYYSR 192


>gi|190361257|gb|ACE76933.1| ribosomal protein small subunit 4 [Crepidomanes minutum]
          Length = 167

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 18/167 (10%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG  +E++     + A +++G T   L+  LE RLD IV+ 
Sbjct: 14  RKVSQFRVRLEAKQRLRFNYGS-TERQLLRYVRIAKKAKGSTGQVLLQLLEMRLDNIVFN 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
            +  PTI AARQ VNHRH+LVN R V+I SYRCK  D+I +K                +R
Sbjct: 73  LRMAPTIRAARQLVNHRHILVNNRFVDIPSYRCKPKDLITLK-----------NQGFLDR 121

Query: 163 DVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            VP++++++             I          + +   LVVE+YSR
Sbjct: 122 KVPDHLTLSFSESKIPKGLVNGI---ANRESINLSINELLVVEYYSR 165


>gi|312863483|ref|ZP_07723721.1| putative ribosomal protein S4 [Streptococcus vestibularis F0396]
 gi|311101019|gb|EFQ59224.1| putative ribosomal protein S4 [Streptococcus vestibularis F0396]
          Length = 129

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 9/135 (6%)

Query: 73  IFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +F +A + +G T   N +  LE RLD +VYR     T   ARQFVNH H+LV+G+ V+I 
Sbjct: 1   MFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIP 60

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SY    G VI V++KS ++ ++LEA + A    P ++S N   +  + +R+P   +    
Sbjct: 61  SYCVTPGQVISVREKSLKVRAILEAVE-ATLGCPAFVSFNAKKLEGSLIRLPERDE---- 115

Query: 192 PVIMQPNLVVEFYSR 206
              +   LVVEFY++
Sbjct: 116 ---INEALVVEFYNK 127


>gi|134274703|emb|CAL30293.1| small ribosomal protein 4 [Lejeunea cavifolia]
          Length = 160

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 8/164 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K           L       K S + ++L  KQK++ +YG ++E++    
Sbjct: 4   RLGSLPGLTRKISKTK------LDRSALNKKISQYRIRLEEKQKLRFHYG-LTERQLLKY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            + A +++G T   L+  LE RLD  ++     PTI  ARQ VNHRH+ +N   V+I SY
Sbjct: 57  VRIARKAKGSTGQVLLQLLEMRLDNTIFCLGMAPTIPGARQLVNHRHIFINDDIVDIPSY 116

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMV 176
            C+ GD+I ++ K K  + + +    +++  +P +++ +   + 
Sbjct: 117 NCEPGDIITIRNKEKSQSIITKNMNSSQKLQIPNHLTFDSTQLR 160


>gi|307579486|gb|ADN63455.1| 30S ribosomal protein S4 [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 115

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 5/118 (4%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150
            LE+RLD ++YR  F  T  AARQ V+HR VLVNG+ VN+ SY  K GDV+ + Q++++ 
Sbjct: 1   MLETRLDNVIYRMGFAVTRPAARQLVSHRSVLVNGKMVNLPSYHVKPGDVVALSQRAQKY 60

Query: 151 ASVLEASQLAER--DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             V E+  + ++      +I V+ +     F  +P        P  +   L+VE YS+
Sbjct: 61  LCVQESLTIKDQHGSAFSWIEVDSEKFSGVFKALPDRAD---LPSDINEALIVELYSK 115


>gi|32401876|gb|AAP80926.1| small ribosomal protein 4 [Cunninghamia lanceolata]
          Length = 181

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 9/164 (5%)

Query: 48  FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107
           + ++L+ KQK++ +YG ++E++     + A R++G T   L+  LE RLD I++R     
Sbjct: 20  YPVRLKEKQKLRFHYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAL 78

Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE---RDV 164
           TI  ARQ VNHRH+LVN R V+I SYRCK  D+I +K K +    + +  ++ +   R V
Sbjct: 79  TIPEARQLVNHRHILVNDRLVDIPSYRCKPQDLISIKDKQRLRNLINKNREIFQKEKRRV 138

Query: 165 PEYISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           P ++++       +    +I  S +     + +   LVVE+YSR
Sbjct: 139 PPHLNLIKKKSQYIGLVKKIIDSNR---ISLKINELLVVEYYSR 179


>gi|29422381|gb|AAO84586.1| small ribosomal protein 4 [Conostomum pentastichum]
          Length = 146

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 4/147 (2%)

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           ++  I+E++  +  + A +++G T   L+  LE RLD +++R    PTI  ARQ VNHRH
Sbjct: 1   FHYGITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQXVNHRH 60

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATF 179
           +LVN R V+I SYR K  D I +K      A   +     ++  +P +++ N        
Sbjct: 61  ILVNDRIVDIPSYRXKPQDFITIKDPQXSHAIXSKNIDFHQKYXIPNHLTYNPLENKGLV 120

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +I   L      + +   L  E+YSR
Sbjct: 121 NQI---LBRESIGLKINELLXXEYYSR 144


>gi|32401838|gb|AAP80907.1| small ribosomal protein 4 [Podocarpus latifolius]
          Length = 222

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 45/229 (19%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+  NL G  K     R           K K S + ++L  KQK++ +YG +++++ 
Sbjct: 4   LVRRLN-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTDRQL 51

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I
Sbjct: 52  LQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDI 111

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER---------------------------- 162
            SYRC   DVI +K + + +  + +   L+++                            
Sbjct: 112 PSYRCNPKDVITIKDRQRSMNIITKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFM 171

Query: 163 --DVPEYISVNHDNMVATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206
              VP +++++            I + + D     + +   LV+E++SR
Sbjct: 172 KHTVPFHLTLDSSRYKGVVKYKGIVNRIIDSTGIGLNINELLVIEYFSR 220


>gi|32401854|gb|AAP80915.1| small ribosomal protein 4 [Phyllocladus aspleniifolius]
          Length = 204

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 34/197 (17%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
           R K K S + ++L  KQK++ +YG +++++     + A R++G T    +  LE RLD I
Sbjct: 10  REKEKKSRYRVRLEEKQKLRFHYG-LTDRQLLQYVRIARRAKGSTGQVFLQLLEMRLDNI 68

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ VNHRH+LVNGR V+I SYRCK  DVI +K + +    + +   L
Sbjct: 69  IFRLGMALTIPGARQLVNHRHILVNGRIVDIPSYRCKPKDVIIIKDQQRSRNIINKNLDL 128

Query: 160 AE------------------------------RDVPEYISVNHDNMVATFVRIPSSLKDV 189
           ++                              R VP +++++         RI  S +  
Sbjct: 129 SKKHQERSRLISKRVINRKEILFFRFKKYEMKRRVPFHLTLDSSQYKGVVNRIIDSTRIG 188

Query: 190 PYPVIMQPNLVVEFYSR 206
                +   LV+E++SR
Sbjct: 189 W---NINELLVIEYFSR 202


>gi|157689584|gb|ABV65348.1| ribosomal protein S4 [Wendtia gracilis]
          Length = 197

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 37/197 (18%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
              + L+L  KQK++ +YG ++E++  +  + A +S+G+T   L+  +  RLD I+++  
Sbjct: 1   KKSYLLRLEEKQKLRFHYG-LTERQLLNYVRIAGKSKGETGQVLLQLIAMRLDNILFQLG 59

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-- 162
              TI  ARQ VNHRH+LVNGR V+I SYRCK  D+I VK   K    +     + E   
Sbjct: 60  MASTIPQARQLVNHRHILVNGRLVDIPSYRCKPRDIIIVKDDKKSRIMIENWMDMIEEKK 119

Query: 163 ---------------------------------DVPEYISVNHDNMVATFVRIPSSLKDV 189
                                             +P++++           ++  S K  
Sbjct: 120 KKMIEEKKKKIENSLGTIQKKKKKIQDLMNSFERLPKHLTFQRSEYKGFVNQVVES-KSE 178

Query: 190 PYPVIMQPNLVVEFYSR 206
              + +   LVV +YSR
Sbjct: 179 EIGLEINEFLVVAYYSR 195


>gi|307069670|ref|YP_003878147.1| 30S ribosomal subunit protein S4 [Candidatus Zinderia insecticola
           CARI]
 gi|306482930|gb|ADM89801.1| 30S ribosomal subunit protein S4 [Candidatus Zinderia insecticola
           CARI]
          Length = 208

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSK-----PSYFGLQLRAK 55
           M++    K+KI RR    L+      +                K      S + LQL  K
Sbjct: 1   MARYIGKKNKIYRRRIPELFLNNSVIIKKNKKKIFKKKIFNIKKKSFLYSSNYKLQLFEK 60

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K  YG I EK+FR+ F  + R RG+T+ N I  LESRLD IVYR  F  T   ARQ 
Sbjct: 61  QKIKYIYG-ILEKQFRNYFNLSIRKRGNTAENFIKLLESRLDNIVYRMGFTNTRSEARQI 119

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDN 174
           V+H+ + VN   VNI SY  KE D++ ++ K K   ++    +L ++   P +I VN   
Sbjct: 120 VSHKFIKVNNIIVNIPSYLLKENDIVTLRNKFKNKNNIKNYLKLFKKIGFPNWIKVNIKK 179

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               ++R P+          +    V+EF+S+
Sbjct: 180 FEGIYLRKPNIKD---INEKINIFSVIEFFSK 208


>gi|224552892|gb|ACN54684.1| small ribosomal protein 4 [Araucaria araucana]
          Length = 216

 Score =  121 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 45/229 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+ +         ++             K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLKDLPGLTKYRRIDRE-----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR 
Sbjct: 49  RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRI 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166
           V+  SYRC   DVI +K + +    + +   L++++                        
Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKNQQRSRLISKRIIKRKKILFFLFKK 168

Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +++++         RI    +     + +   LV+E++SR
Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214


>gi|32401852|gb|AAP80914.1| small ribosomal protein 4 [Microstrobos fitzgeraldii]
          Length = 204

 Score =  121 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 33/196 (16%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
           R K K S + ++L  KQK + +YG +++++     + A R++G T   L+  LE RLD I
Sbjct: 11  REKEKKSQYRIRLEEKQKCRFHYG-LTDRQLLRYVRIARRAKGSTGQVLLQLLEMRLDNI 69

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++R     TI  ARQ +NHRH+LVNGR V+I SYRC   DVI +K + +    + +   L
Sbjct: 70  LFRLGMTFTIPGARQLINHRHILVNGRIVDIPSYRCNPKDVITIKDQQRSRNIINKNIDL 129

Query: 160 AER-----------------------------DVPEYISVNHDNMVATFVRIPSSLKDVP 190
           +++                             +VP ++ +          RI  S +   
Sbjct: 130 SKKHQAKKHQERLRPISKNILFFKFKKREMKHEVPFHLILYSSQYKGVVNRIIDSTR--- 186

Query: 191 YPVIMQPNLVVEFYSR 206
             + M   LV+E++SR
Sbjct: 187 IGLKMNELLVIEYFSR 202


>gi|56070063|gb|AAV70692.1| ribosomal protein 4 [Gnetum costatum]
          Length = 160

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L+ KQK++ ++G ++E++ R   + A + +G T   L+  LE RLD I+Y+     TI  
Sbjct: 9   LQEKQKIRFHFG-LTERQLRQYVQIAKKVQGSTGQVLLQLLEMRLDNILYQLGLAGTIPG 67

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYI 168
           ARQ VNHRH+LVN   VNI SYRCK  DVI +K K+      +     ++  E+ +P ++
Sbjct: 68  ARQLVNHRHILVNDYVVNIPSYRCKPQDVITIKGKNPDQLKTIITRNRNKAREKKIPYHL 127

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           +++         +I          + ++  LV+E+Y
Sbjct: 128 TLDLSQNKGIVNKIIDRKD---IQLNIKEMLVIEYY 160


>gi|162423608|gb|ABX89576.1| small ribosomal protein 4 [Araucaria cunninghamii]
          Length = 216

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 45/229 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+  +L G  K     R           K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLK-DLPGLTKYRRIDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR 
Sbjct: 49  RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRI 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166
           V+  SYRC   DVI +K + +    + +   L ++                         
Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLTKKHQQRSRLISKRIIKRKKILFFLFKK 168

Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +++++         RI  + +     + +   LV+E++SR
Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDTTR---INLNINELLVIEYFSR 214


>gi|212004151|gb|ACJ15384.1| Rps4 [Pellaea andromedifolia]
          Length = 178

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K   F ++L AKQ+ +  YG ++E++     + A ++RG T    +  LE RLD 
Sbjct: 11  QPASKKIFQFCVRLEAKQRXRLNYG-LTERQXLKYIRIARKTRGSTGQVPLQLLEMRLDN 69

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           ++++     TI AARQ VNHRH+LVN R V+I S RCK  D+I ++ +     +      
Sbjct: 70  VIFQLGIASTIPAARQLVNHRHILVNRRIVDIPSXRCKPKDIITIRNRPTSYNAAKV-ES 128

Query: 159 LAERDVPEYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
               +VP++++++             +          + +   LVVE++SR
Sbjct: 129 FGRDEVPDHLTLSISKTNEPTGLVNHM---ANRESVNLDINELLVVEYHSR 176


>gi|32401834|gb|AAP80905.1| small ribosomal protein 4 [Nageia nagi]
          Length = 218

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 45/228 (19%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
            RR+  NL G  K     R           K K S + ++L  KQK++ +YG +++++  
Sbjct: 1   IRRLK-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTDRQLL 48

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I 
Sbjct: 49  QYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIP 108

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAER----------------------------- 162
           SYRC   DVI +K + +    + +   L+++                             
Sbjct: 109 SYRCNPKDVITIKDRQRSRNIINKNIDLSKKHQERSRLISKRIINRKFILFFRFKKHFMK 168

Query: 163 -DVPEYISVNHDNMVATF--VRIPSSLKDVP-YPVIMQPNLVVEFYSR 206
             VP +++++            I + + D     + +   LV+E++SR
Sbjct: 169 HTVPFHLTLDSSRYKGVVNYKGIVNRIIDSTGIGLNINELLVIEYFSR 216


>gi|32401836|gb|AAP80906.1| small ribosomal protein 4 [Podocarpus henkelii]
          Length = 216

 Score =  121 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 38/215 (17%)

Query: 29  TRSYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDT 84
             +  PGL   RR    K K S + ++L  KQK++ +YG +++++     + A R++G T
Sbjct: 1   RLNNLPGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGST 59

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC   DVI +K
Sbjct: 60  GQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITIK 119

Query: 145 QKSKQLASVLEASQLAER------------------------------DVPEYISVNHDN 174
            + + +  + +   L+++                               VP +++++   
Sbjct: 120 DRQRSMNIITKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFMKHTVPFHLTLDSSR 179

Query: 175 MVATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206
                    I + + D     + +   LV+E++SR
Sbjct: 180 YKGVVKYKGIVNRIIDSTGIGLNINELLVIEYFSR 214


>gi|190361253|gb|ACE76931.1| ribosomal protein small subunit 4 [Trichomanes lucens]
          Length = 161

 Score =  121 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 18/163 (11%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S FG++L AKQ+++  YG   E++     + A +++G T   L+  LE RLD IV+R
Sbjct: 14  RKVSQFGIRLEAKQRLRFNYGS-RERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNIVFR 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRHVLVN   V+I SYRCK+ D+I ++           + + + +
Sbjct: 73  LGMAPTIPAARQLVNHRHVLVNNHIVDIPSYRCKDKDLITLR-----------SQESSRK 121

Query: 163 DVPEYISVNHD---NMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
            +P+++  + +   N       I          + +   LVVE
Sbjct: 122 RIPDHLKFSSEQGNNPKGLVNGI---ANRESIDLNINELLVVE 161


>gi|7576621|gb|AAF63923.1| ribosomal protein system 4 [Entodontopsis leucostega]
          Length = 153

 Score =  121 bits (303), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 5/156 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 2   KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER- 162
              PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K  A + +  +  ++ 
Sbjct: 61  GMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKFEAIISKNIEFYQKS 120

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
            +P +++ +         +I   L      + +   
Sbjct: 121 KIPNHLTYSSLEKKGLVNQI---LNRESIGLKINEL 153


>gi|56070071|gb|AAV70696.1| ribosomal protein 4 [Ephedra likiangensis]
          Length = 162

 Score =  120 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + + L+ KQK++ +YG ++E++ R     A  ++G T   L+  LE RLD I++R 
Sbjct: 1   KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161
               TI  ARQ VNHRH+LVN   V+I SYRCK  D+I +K K  +   +       +  
Sbjct: 60  GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119

Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
                VP Y++ N         +I  +       + ++  LV+E+Y
Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEXLVIEYY 162


>gi|238021615|ref|ZP_04602041.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147]
 gi|237866229|gb|EEP67271.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147]
          Length = 102

 Score =  120 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 4/105 (3%)

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
             F  T   ARQ V+H+ ++VNG+ VNI S++ K GDV+ +++K+K+   + EA  LA +
Sbjct: 1   MGFASTRAEARQLVSHKAIMVNGQVVNIPSFQVKAGDVVAIREKAKKQVRIQEAMGLATQ 60

Query: 163 -DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P ++SV+   +  TF  +P   +       +   LVVEFYS+
Sbjct: 61  IGLPSWVSVDATKLEGTFKNVPDRAELYS---DINEQLVVEFYSK 102


>gi|311223002|gb|ADP76583.1| small ribosomal protein 4 [Noteroclada confluens]
          Length = 122

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
            T   J+  LE RLD  ++R     TI  ARQ VN RH+L+N   V+I SY C+ GDVI 
Sbjct: 2   STGEXJLQLLEMRLDNTIFRLGMSSTIPGARQLVNXRHILINDNMVDIPSYNCEPGDVIT 61

Query: 143 VKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
           VK + +  + + +  +     +P ++++N      +  ++ +        + +   LVVE
Sbjct: 62  VKNRRESQSIIAKNMEFQRPXIPNHLTLNSIQFQGSVNQVINR---ECJDLKINELLVVE 118

Query: 203 FYSR 206
           +YSR
Sbjct: 119 YYSR 122


>gi|56070073|gb|AAV70697.1| ribosomal protein 4 [Ephedra equisetina]
 gi|56070075|gb|AAV70698.1| ribosomal protein 4 [Ephedra intermedia]
 gi|56070077|gb|AAV70699.1| ribosomal protein 4 [Ephedra minuta]
 gi|56070079|gb|AAV70700.1| ribosomal protein 4 [Ephedra frustillata]
 gi|56070081|gb|AAV70701.1| ribosomal protein 4 [Ephedra andina]
 gi|56070083|gb|AAV70702.1| ribosomal protein 4 [Ephedra gerardiana]
 gi|56070085|gb|AAV70703.1| ribosomal protein 4 [Ephedra monosperma]
 gi|56070087|gb|AAV70704.1| ribosomal protein 4 [Ephedra sinica]
 gi|56070089|gb|AAV70705.1| ribosomal protein 4 [Ephedra frustillata]
 gi|56070091|gb|AAV70706.1| ribosomal protein 4 [Ephedra sinica]
 gi|56070093|gb|AAV70707.1| ribosomal protein 4 [Ephedra californica]
 gi|56070095|gb|AAV70708.1| ribosomal protein 4 [Ephedra equisetina]
 gi|56070097|gb|AAV70709.1| ribosomal protein 4 [Ephedra fragilis]
 gi|56070099|gb|AAV70710.1| ribosomal protein 4 [Ephedra gerardiana]
 gi|56070103|gb|AAV70712.1| ribosomal protein 4 [Ephedra minuta]
 gi|56070105|gb|AAV70713.1| ribosomal protein 4 [Ephedra minuta]
 gi|56070107|gb|AAV70714.1| ribosomal protein 4 [Ephedra antisyphilitica]
 gi|56070109|gb|AAV70715.1| ribosomal protein 4 [Ephedra intermedia]
 gi|56070111|gb|AAV70716.1| ribosomal protein 4 [Ephedra torreyana]
 gi|56070113|gb|AAV70717.1| ribosomal protein 4 [Ephedra gerardiana]
 gi|56070115|gb|AAV70718.1| ribosomal protein 4 [Ephedra distachya]
 gi|56070117|gb|AAV70719.1| ribosomal protein 4 [Ephedra trifurca]
 gi|56070119|gb|AAV70720.1| ribosomal protein 4 [Ephedra major subsp. procera]
 gi|56070121|gb|AAV70721.1| ribosomal protein 4 [Ephedra nevadensis]
 gi|56070123|gb|AAV70722.1| ribosomal protein 4 [Ephedra rupestris]
 gi|56070125|gb|AAV70723.1| ribosomal protein 4 [Ephedra likiangensis]
 gi|56070127|gb|AAV70724.1| ribosomal protein 4 [Ephedra chilensis]
 gi|56070129|gb|AAV70725.1| ribosomal protein 4 [Ephedra tweediana]
 gi|56070131|gb|AAV70726.1| ribosomal protein 4 [Ephedra distachya]
 gi|56070133|gb|AAV70727.1| ribosomal protein 4 [Ephedra equisetina]
 gi|56070135|gb|AAV70728.1| ribosomal protein 4 [Ephedra aphylla]
 gi|56070137|gb|AAV70729.1| ribosomal protein 4 [Ephedra altissima]
 gi|56070139|gb|AAV70730.1| ribosomal protein 4 [Ephedra altissima]
 gi|56070141|gb|AAV70731.1| ribosomal protein 4 [Ephedra alata]
 gi|56070143|gb|AAV70732.1| ribosomal protein 4 [Ephedra foliata]
 gi|56070145|gb|AAV70733.1| ribosomal protein 4 [Ephedra foliata]
 gi|56070147|gb|AAV70734.1| ribosomal protein 4 [Ephedra ciliata]
 gi|56070149|gb|AAV70735.1| ribosomal protein 4 [Ephedra campylopoda]
 gi|56070151|gb|AAV70736.1| ribosomal protein 4 [Ephedra major]
 gi|56070153|gb|AAV70737.1| ribosomal protein 4 [Ephedra pachyclada]
 gi|270356472|gb|ACZ80491.1| ribosomal protein 4 [Ephedra major subsp. procera]
 gi|270356474|gb|ACZ80492.1| ribosomal protein 4 [Ephedra lomatolepis]
 gi|270356476|gb|ACZ80493.1| ribosomal protein 4 [Ephedra foliata]
 gi|270356478|gb|ACZ80494.1| ribosomal protein 4 [Ephedra foliata]
 gi|270356480|gb|ACZ80495.1| ribosomal protein 4 [Ephedra foliata]
 gi|270356484|gb|ACZ80497.1| ribosomal protein 4 [Ephedra major subsp. major]
 gi|270356486|gb|ACZ80498.1| ribosomal protein 4 [Ephedra distachya]
 gi|270356488|gb|ACZ80499.1| ribosomal protein 4 [Ephedra fragilis]
 gi|270356490|gb|ACZ80500.1| ribosomal protein 4 [Ephedra lomatolepis]
 gi|270356492|gb|ACZ80501.1| ribosomal protein 4 [Ephedra major subsp. procera]
 gi|270356496|gb|ACZ80503.1| ribosomal protein 4 [Ephedra fragilis]
 gi|270356498|gb|ACZ80504.1| ribosomal protein 4 [Ephedra laristanica]
 gi|270356500|gb|ACZ80505.1| ribosomal protein 4 [Ephedra milleri]
          Length = 162

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + + L+ KQK++ +YG ++E++ R     A  ++G T   L+  LE RLD I++R 
Sbjct: 1   KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161
               TI  ARQ VNHRH+LVN   V+I SYRCK  D+I +K K  +   +       +  
Sbjct: 60  GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119

Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
                VP Y++ N         +I  +       + ++  LV+E+Y
Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEMLVIEYY 162


>gi|56070101|gb|AAV70711.1| ribosomal protein 4 [Ephedra chilensis]
          Length = 162

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + + L+ KQK++ +YG ++E++ R     A  ++G T   L+  LE RLD I++R 
Sbjct: 1   KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161
               TI  ARQ VNHRH+LVN   V+I SYRCK  D+I +K K  +   +       +  
Sbjct: 60  GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119

Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
                VP Y++ N         +I  +       + ++  LV+E+Y
Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLXIKEMLVIEYY 162


>gi|162423604|gb|ABX89574.1| small ribosomal protein 4 [Araucaria bidwillii]
 gi|162423606|gb|ABX89575.1| small ribosomal protein 4 [Araucaria brasiliensis]
          Length = 216

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 45/229 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+  +L G  K     R           K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLK-DLPGLTKYRRIDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR 
Sbjct: 49  RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRI 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166
           V+  SYRC   DVI +K + +    +     L+++                         
Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKINIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168

Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +++++         RI    +     + +   LV+E++SR
Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214


>gi|147767143|emb|CAN75644.1| hypothetical protein VITISV_031266 [Vitis vinifera]
          Length = 132

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS     + +  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1   MSCYRGXRFQKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           +YG ++E++  +    A +++      L+  LE  LD I++R     TI  ARQ VNHRH
Sbjct: 57  HYG-LTERQLLNYVHIARKAKWAIGRVLLQLLEMHLDNILFRLGMASTILGARQLVNHRH 115

Query: 121 VLVNGRSVNIGSYRCKE 137
           +LVNGR V+I SY CK 
Sbjct: 116 ILVNGRIVDIPSYCCKP 132


>gi|37992509|gb|AAR06433.1| small ribosomal protein 4 [Ephemeropsis trentepohlioides]
          Length = 219

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 38/222 (17%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K P    S     +      K S + ++L  KQK++ YYG +SE++  +
Sbjct: 1   RRLGVLXGLTNKIPQVKSSS---SNQSTSNKKISQYRIRLEEKQKLRFYYG-VSEQQLLN 56

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A +++G T   L+  LE RLD+I++R    PTI  ARQ ++HR++LVN   V+I S
Sbjct: 57  YVRIARKAKGSTGEVLLQLLEMRLDSIIFRLSMAPTIPGARQLISHRNILVNNFIVDIPS 116

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQL-------------------------------AE 161
           YRCK  D I +K K K   ++ +  +L                                +
Sbjct: 117 YRCKPQDFISMKNKEKSEFTINKNIELHPKSELIVNKKIDLHPKKKIDLHPKKKIDLHPK 176

Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
            ++P +++ N         +I          +I+   L+ E+
Sbjct: 177 SEIPNHLTYNALEKTGLVNKIVDR---ELVGLIINELLLAEY 215


>gi|17154633|emb|CAC83930.1| ribosomal protein S4 [Ixiolirion tataricum]
          Length = 184

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 12/186 (6%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKS-----KPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           L G  +     RS       Q R       K S + L+L  KQK++ +YG +++++    
Sbjct: 3   LQGLTRKIPKKRSKREEPKNQSRSKIPYSGKKSEYHLRLEEKQKVRFHYG-LTDRQLLRY 61

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
              A +++G TS  L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SY
Sbjct: 62  VHIAGKAKGSTSQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

Query: 134 RCKEGDVIEVKQKSKQLASVLEASQLA---ERDVPEYISVNHDNMVATFVRIPSSLKDVP 190
           RCK  D+I  K K +  A +      +   ++ +P +++++         +I  S     
Sbjct: 122 RCKPRDIITTKDKQRSKALIQNHIASSPHKKKKLPVHLTIDSSQSKGLVNQIIDSQ---W 178

Query: 191 YPVIMQ 196
             + ++
Sbjct: 179 IGLKIK 184


>gi|56070061|gb|AAV70691.1| ribosomal protein 4 [Gnetum gnemon]
          Length = 160

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L+ KQK++ ++G ++E++ R   + A + +G T   L+  L+ RLD I+Y+     TI  
Sbjct: 9   LQEKQKIRFHFG-LTERQLRQYVQIAQKVQGSTGQVLLQLLKMRLDNILYQLGLAGTIPG 67

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---EASQLAERDVPEYI 168
           ARQ VNHRH+LVN   VNI SYRCK  DVI +K K+      L     ++  E+ +P ++
Sbjct: 68  ARQLVNHRHILVNDYVVNIPSYRCKPQDVITIKGKNPDQLKTLITRNRNKAREKKIPYHL 127

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           +++         +I          + ++  LV+E+Y
Sbjct: 128 TLDLSQNKGIVNKIIDRKD---IQLNIKEMLVIEYY 160


>gi|170516231|gb|ACB15117.1| small ribosomal protein 4 [Microcachrys tetragona]
          Length = 221

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 50/234 (21%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+  N+ G  K     R           K K S + ++L  KQK + +YG +++
Sbjct: 1   RIKLIRRLK-NIPGLTKYRRVDRE----------KEKKSQYRIRLEEKQKCRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R++G T   L+  LE RLD I++R     TI  ARQ +NHRH+LVNGR 
Sbjct: 49  RQLLRYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMTFTIPGARQLINHRHILVNGRI 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------- 162
           V+I SYRC   DVI +K + +    + +   L+++                         
Sbjct: 109 VDIPSYRCNPKDVITIKDQQRSRNIINKNRDLSKKHQAKKHQERLRPISKRIINRKNILF 168

Query: 163 ----------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                     +VP ++ +          RI  S +     + M   LV+E++SR
Sbjct: 169 FKFKKREMKHEVPFHLILYSSQYKGVVNRIIDSTR---IGLKMNELLVIEYFSR 219


>gi|52788781|gb|AAU87371.1| ribosomal protein small subunit 4 [Adiantum raddianum]
          Length = 188

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 8/193 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+        K+  ++         Q    K S F ++L AKQ+++  YG ++E
Sbjct: 1   RLKLMRRLKNLPGLAGKNNASSSGEFRVAGDQSTSRKISQFCVRLEAKQRLRLNYG-LTE 59

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R 
Sbjct: 60  RQLLKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRI 119

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD---NMVATFVRIPS 184
           V+I SYR K  D+I ++ +     +V ++  L   +VP++++++               +
Sbjct: 120 VDIPSYRRKPSDIITIRNRPTSY-NVAKSESLERDEVPDHLTLSLSETGEPTGLVSHTVN 178

Query: 185 SLKDVPYPVIMQP 197
                   + +  
Sbjct: 179 R---ESVKLDINE 188


>gi|33413169|emb|CAD86767.1| ribosomal protein small subunit 4 [Codriophorus fascicularis]
          Length = 153

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 5/153 (3%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
              K+P    +    ++      K S + ++L  KQK++ +YG ++E++  +  + A ++
Sbjct: 1   LTNKTPQLKSNS---INQSTSNKKISQYRIRLEEKQKLRFHYG-LTERQLLNYVRIARKA 56

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD +++R    PTI  ARQ VNHRH+LVN   VNI SYRCK  D 
Sbjct: 57  KGSTGQVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNNCIVNIPSYRCKPQDF 116

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYISVNH 172
           I +K + K  A +++    +++  +P +++ N 
Sbjct: 117 ITIKDRQKSQAMIIKNMDFSQKYKIPNHLTFNS 149


>gi|314906639|gb|ADT61838.1| ribosomal protein subunit 4 [Scleropodium obtusifolium]
          Length = 168

 Score =  118 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 2/153 (1%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           J+      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 11  JNQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
             +  ++  +P +++ +         +I     
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQILDRES 162


>gi|32401842|gb|AAP80909.1| small ribosomal protein 4 [Podocarpus salignus]
          Length = 222

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 38/213 (17%)

Query: 28  NTRSYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
              +  PGL   RR    K K S + ++L  KQ ++ +YG +++++     + A R++G 
Sbjct: 6   RRXNNLPGLTQYRRVDREKEKKSRYRIRLEEKQXVRFHYG-LTDRQLLQYVRIARRAKGS 64

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC   DVI +
Sbjct: 65  TGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITI 124

Query: 144 KQKSKQLASVLEASQLAER------------------------------DVPEYISVNHD 173
           K + + +  + +   L+++                               VP +++++  
Sbjct: 125 KDRQRSMNIINKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFMKHTVPFHLTLDSS 184

Query: 174 NMVATFVR--IPSSLKDVP-YPVIMQPNLVVEF 203
                     I + + D     + +   LV+E+
Sbjct: 185 RYKGVVKYKGIVNRIIDSTGIGLNINELLVIEY 217


>gi|32401846|gb|AAP80911.1| small ribosomal protein 4 [Afrocarpus falcatus]
          Length = 216

 Score =  118 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)

Query: 31  SYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86
           +  PGL   RR    K K S + ++L  KQK++ +YG +++++     + A R++G T  
Sbjct: 3   NNLPGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGSTGQ 61

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
            L+  LE RLD I++R     TI  ARQ  NHRH+LVNGR V+I SYRC   DVI +K +
Sbjct: 62  VLLQLLEMRLDNILFRLGMALTIPGARQLXNHRHILVNGRMVDIPSYRCNPKDVITIKDR 121

Query: 147 SKQLASVLEASQLAER------------------------------DVPEYISVNHDNMV 176
            +    + +   L+++                               VP +++++     
Sbjct: 122 QRSRNIINKNIDLSKKHQERSRPISKRIINRKFILFFRFKKHFMKHTVPFHLTLDSSRYK 181

Query: 177 ATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206
                  I + + D     + +   LV+E++SR
Sbjct: 182 GVVKYKGIVNRIIDSTGIGLNINELLVIEYFSR 214


>gi|162423610|gb|ABX89577.1| small ribosomal protein 4 [Wollemia nobilis]
          Length = 216

 Score =  118 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 45/229 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+  +L G  K     R           K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLK-DLPGLTKYRRIDRE----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ V HRH+LVNGR 
Sbjct: 49  RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMTLTIPGARQLVCHRHILVNGRI 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166
           V+  SYRC   DVI +K + +    + +   L+++                         
Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168

Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +++++         RI    +     + +   LV+E++SR
Sbjct: 169 QEMRQYSQIHLTLDPFRHKGVVNRIIDITR---INLNINELLVIEYFSR 214


>gi|226329505|ref|ZP_03805023.1| hypothetical protein PROPEN_03414 [Proteus penneri ATCC 35198]
 gi|225202691|gb|EEG85045.1| hypothetical protein PROPEN_03414 [Proteus penneri ATCC 35198]
          Length = 102

 Score =  118 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 4/105 (3%)

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE- 161
             F  T   ARQ V+H+ ++VNGR VNI SY+    DV+ V++KSK+ + +  A +LAE 
Sbjct: 1   MGFGATRAEARQMVSHKAIMVNGRVVNIASYQVSPNDVVSVREKSKKQSRIKAALELAEQ 60

Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+ P ++ V+   M   F RIP           +  +L+VE YS+
Sbjct: 61  REKPTWLEVDAAKMEGVFKRIPERTD---LSADINEHLIVELYSK 102


>gi|314906635|gb|ADT61836.1| ribosomal protein subunit 4 [Scleropodium touretii]
          Length = 168

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 2/153 (1%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+   E R
Sbjct: 11  INQSTSNKKISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLPEMR 69

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN   V+I SYRCK  D I +K + K    + +
Sbjct: 70  LDNVIFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSYRCKPQDFITIKNQRKSETIISK 129

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLK 187
             +  ++  +P +++ +         +I     
Sbjct: 130 NIEFYQKYKIPNHLTYSFLEKKGLVNQILDRES 162


>gi|32401880|gb|AAP80928.1| small ribosomal protein 4 [Glyptostrobus lineatus]
          Length = 179

 Score =  117 bits (294), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 9/164 (5%)

Query: 48  FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107
           + ++L+ KQ+++ +YG ++E++     + A R++G T   L+  LE RLD I++R     
Sbjct: 18  YPVRLKEKQRLRFHYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMAL 76

Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---V 164
           TI  ARQ VNHRH LVN R V I SYRCK    + +K K      + +   + ++D   V
Sbjct: 77  TIPEARQLVNHRHXLVNDRIVEIPSYRCKPQYFLSIKDKQWLRDRIYKNIDIFQKDXMRV 136

Query: 165 PEYISVNHDN--MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           P +++             +I  + +     + +   LVVE+YSR
Sbjct: 137 PPHLNRIKKKSQYSGLVKKIIDNNR---IGLKINELLVVEYYSR 177


>gi|45271068|gb|AAS56922.1| ribosomal protein small subunit 4 [Adiantum raddianum]
          Length = 187

 Score =  117 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
            K+ RR+        K+  ++         Q    K S F ++L AKQ+++  YG ++E+
Sbjct: 1   LKLMRRLKNLPGLAGKNNASSSGEFRVAGDQSTSRKISQFCVRLEAKQRLRLNYG-LTER 59

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +     + A R+RG T    +  LE RLD ++++     TI AARQ V+HRH+LVN R V
Sbjct: 60  QLLKYVRIARRTRGSTGQVPLQLLEMRLDNVIFQLGIASTIPAARQLVSHRHILVNRRIV 119

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD---NMVATFVRIPSS 185
           +I SYR K  D+I ++ +     +V ++  L   +VP++++++               + 
Sbjct: 120 DIPSYRRKPSDIITIRNRPTSY-NVAKSESLERDEVPDHLTLSLSETGEPTGLVSHTVNR 178

Query: 186 LKDVPYPVIMQP 197
                  + +  
Sbjct: 179 ---ESVKLDINE 187


>gi|162423600|gb|ABX89572.1| small ribosomal protein 4 [Agathis dammara]
 gi|162423602|gb|ABX89573.1| small ribosomal protein 4 [Agathis robusta]
          Length = 216

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 45/229 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+ +         ++             K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLKDLPGLTKYRRIDRE-----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ V HRH+LVN R 
Sbjct: 49  RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLGMTLTIPGARQLVCHRHILVNSRI 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166
           V+  SYRC   DVI +K + +    + +   L+++                         
Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168

Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +++++         RI    +     + +   LV+E++SR
Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214


>gi|170516239|gb|ACB15121.1| small ribosomal protein 4 [Austrotaxus spicata]
          Length = 199

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 10/202 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI   +   L    KSP   +   P +    R  KPS + ++L+ KQK+  +Y   +E
Sbjct: 1   RLKIINCLKILLGLSKKSPNIKK---PRVKKHYRAPKPSKYPIRLKKKQKVGFHY-KFTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++       A RS G     L+  LE  LD I+++     TI  AR+  NHR +L+N R 
Sbjct: 57  RQLLQCSHIARRSEGYIVEVLLQLLEINLDNIIFQLGMASTIPGARKLFNHRDILLNNRI 116

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDNMVATFVRIPS 184
           V+I SY CK  D+I +K + +    + +   LA+RD   VP  +  N     + ++ +  
Sbjct: 117 VDIPSYHCKPQDLISIKDQQRSRNIINKNIDLAKRDKMRVPNLL--NLKKEKSQYIELVK 174

Query: 185 SLKDV-PYPVIMQPNLVVEFYS 205
            + D     + +   LV+E+YS
Sbjct: 175 KIIDSKWISLKINELLVIEYYS 196


>gi|294669849|ref|ZP_06734908.1| hypothetical protein NEIELOOT_01742 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308242|gb|EFE49485.1| hypothetical protein NEIELOOT_01742 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 102

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 4/105 (3%)

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-E 161
             F  T   ARQ V H+ ++VNG  VNI S++ + GDV+ V++K+K+   + EA  LA +
Sbjct: 1   MGFGSTRAEARQLVAHKAIVVNGHVVNIPSFQVQPGDVVAVREKAKKQVRIQEALGLAIQ 60

Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
             +P +++V+   M   F  +P   +       +   LVVEFYS+
Sbjct: 61  IGLPGWVAVDTGKMEGIFKNMPDRSE---LTGDINEQLVVEFYSK 102


>gi|2739258|emb|CAA10996.1| 30S ribosomal protein S4 [Prototheca wickerhamii]
          Length = 161

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S +G++L+ K K++  YG I+E++  +  +EA R +G T   L+  LE RLD I+YR 
Sbjct: 2   KESQYGIRLKEKTKLRYNYG-INERQLINYVREARRRKGSTGEVLLQLLEMRLDNIIYRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-R 162
            F PTI AARQ +NH H+ VN +++NI SY CK  D+I V         +    Q     
Sbjct: 61  GFAPTIPAARQLINHGHINVNNKNINIPSYICKINDIISV--LKNSQQLIKNYLQNGGIS 118

Query: 163 DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++   +++N + + A+   I          + +   LV+E+YSR
Sbjct: 119 ELSTCLNLNKEKLEASINNIIPRD---LVKLEINELLVIEYYSR 159


>gi|326565699|gb|EGE15862.1| 30S ribosomal protein S4 [Moraxella catarrhalis 12P80B1]
          Length = 131

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 7/128 (5%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSYG----PGLHGQRRKSKPSYFGLQLRAK 55
           M++    K K+ RR G +L  +    P + ++      PG HG  +     Y   QLR K
Sbjct: 1   MARYIGPKLKLSRREGTDLQLKSGVKPYDVKTKKAGRVPGQHGNSQNKTSEY-ASQLREK 59

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           QK+K+ YG + E++F + +KEA R RG T  NL+  LE RLD +VYR  F  T   ARQ 
Sbjct: 60  QKVKRMYGVL-ERQFSNYYKEAARERGATGENLLVTLERRLDNVVYRMGFGATRAEARQL 118

Query: 116 VNHRHVLV 123
           V+HR +++
Sbjct: 119 VSHRAIML 126


>gi|108773404|ref|YP_635923.1| ribosomal protein S4 [Helicosporidium sp. ex Simulium jonesii]
 gi|122197338|sp|Q2EEX1|RR4_HELSJ RecName: Full=Plastid 30S ribosomal protein S4
 gi|87242979|gb|ABD33971.1| ribosomal protein S4 [Helicosporidium sp. ex Simulium jonesi]
          Length = 173

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 2/156 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSP-VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
           M +    + +I RR+G+      K P + ++    G   ++ K +PS +GL+L AKQ+  
Sbjct: 1   MGRYRGPRLRIIRRLGDLPLFTKKKPHIASKRLPLGHPVRKIKRRPSIYGLRLLAKQRCC 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + + + ++  K+A  ++GD   NLI  LESRLD+ +YR+  V T+ AARQ + H 
Sbjct: 61  YSYG-LRDYQLKNYIKKARNAQGDPIKNLIFLLESRLDSKIYRSGIVSTMAAARQLITHG 119

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           HVLV+   + I SY C E  +++ K        + +
Sbjct: 120 HVLVDNIKITIPSYSCNESQILDYKNTKLTSELIEK 155


>gi|51458112|gb|AAU03407.1| ribosomal protein small subunit 4 [Asplenium cordatum]
          Length = 172

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 8/162 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q    K S F ++L AKQ+++  YG ++E++     + A R+RG T    +  LE RLD 
Sbjct: 16  QSTSRKISQFCVRLEAKQRLRFNYG-LTERQLLRYVRIARRTRGSTGQVPLQLLEMRLDN 74

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           +++      TI AARQ VNHRH+LVN   V+I SYRCK  D I V+ +     ++   S 
Sbjct: 75  VLFHLGMASTIPAARQLVNHRHILVNNCIVDIPSYRCKPKDFITVRNRPNSCNALRNKSL 134

Query: 159 LAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQP 197
           + E+  P++++V     D       R+ +     P  + +  
Sbjct: 135 VGEKT-PDHLTVSLSEGDRPTGLVNRVANRK---PINLNINE 172


>gi|32401848|gb|AAP80912.1| small ribosomal protein 4 [Dacrydium cupressinum]
          Length = 217

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 45/227 (19%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+  NL G  K     R           K K S + ++L  KQK++ +YG +++++   
Sbjct: 1   RRLN-NLPGLTKYRRVDRE----------KEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQ 48

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
             + A R++G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I S
Sbjct: 49  YVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPS 108

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER------------------------------ 162
           YRC   DVI +K + +    + +   L+++                              
Sbjct: 109 YRCNPKDVITIKDRQRSRNIITKNIDLSKKHQERSRLISKRIINRKFIRFFRFKKYFMKH 168

Query: 163 DVPEYISVNHDNMVATFVR--IPSSLKDV-PYPVIMQPNLVVEFYSR 206
            VP ++++        F    I + + D     + +   LV+E++SR
Sbjct: 169 TVPFHLTLGSSRYKGVFKYKGIVNRIIDSAGIGLNINELLVIEYFSR 215


>gi|32401858|gb|AAP80917.1| small ribosomal protein 4 [Araucaria heterophylla]
          Length = 209

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 38/207 (18%)

Query: 34  PGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89
           PGL   RR    K K S + ++L  KQK++ +YG +++++     + A R+ G T   L+
Sbjct: 5   PGLTKYRRIDREKEKKSRYRIRLEEKQKLRFHYG-LTDRQLLQYVRIARRAEGSTGEVLL 63

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             LE RLD I++R     TI  ARQ V HRH+LVNGR V+  SYRC   DVI +K + + 
Sbjct: 64  QLLEMRLDNIIFRLGMALTIPGARQLVCHRHILVNGRIVDKPSYRCNPYDVITIKDQQRS 123

Query: 150 LASVLEASQLAERDVPE------------------------------YISVNHDNMVATF 179
              + +   L+++                                  +++++        
Sbjct: 124 RNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKKQEMRQYSQIHLTLDPFRYKGVV 183

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI    +     + +   LV+E++SR
Sbjct: 184 NRIIDITR---INLNINELLVIEYFSR 207


>gi|32401844|gb|AAP80910.1| small ribosomal protein 4 [Lagarostrobos franklinii]
          Length = 216

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 45/226 (19%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           + RR+  NL G  K     R           + K S + ++L  KQK++ +YG +++++ 
Sbjct: 4   LIRRLK-NLPGLTKYRRVDRE----------EEKKSRYRIRLEEKQKLRFHYG-LTDRQL 51

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R+ G T   L+  LE RLD I++R     TI  ARQ VNHRH+LVNG  V+I
Sbjct: 52  LQYIRIARRAEGSTGQVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGLMVDI 111

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAER---------------------------- 162
            SYRCK  DVI +K + +    + +   L ++                            
Sbjct: 112 PSYRCKSKDVITIKDRQRSRNIINKNRDLYKKHQKRPRFISKRIINRKKNLSLRFQKYEM 171

Query: 163 --DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              VP ++++          +I  +   +   + +   LV+E++SR
Sbjct: 172 KHKVPFHLTLYSSQYKGVVNQIIDN---ISIGLDINELLVIEYFSR 214


>gi|107770430|gb|ABF83756.1| small ribosomal protein 4 [Taxus wallichiana var. chinensis]
          Length = 189

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI  R+        K P   R   P      +  KPS + ++L+ KQ+++ +YG ++E
Sbjct: 1   RLKIINRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRFHYG-LTE 57

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A RS+G T   L+  LE RLD I++R     TI  ARQ V+HRH+LVN R 
Sbjct: 58  RQLLQYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRHILVNDRI 117

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRI 182
           V+I SYRCK  D+I +K + + +  +     L++RD   VP ++++       +    +I
Sbjct: 118 VDIPSYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQYIGLVKKI 177

Query: 183 PSSLK 187
             S +
Sbjct: 178 IDSKR 182


>gi|99640025|emb|CAJ45142.1| putative ribosomal protein S4 gene [Hymenophyllopsis dejecta]
          Length = 185

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 16/194 (8%)

Query: 11  IDRRIGENLWGRPKS--PVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK 68
           + RR+        K+  P  TR+       Q    K S F ++L AKQ+++  YG ++E+
Sbjct: 1   VIRRLKNLPGLTGKTSNPGKTRTAAD----QSASRKISQFCVRLEAKQRLRFNYG-LTER 55

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
             R   + A +++G T    +  LE RLD I++ +    TI AARQ VNHRH+LVN R V
Sbjct: 56  LLR-YVRIARKTKGSTGQVPLQLLEMRLDNIIFHSGMASTIPAARQLVNHRHILVNDRIV 114

Query: 129 NIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER--DVPEYISV---NHDNMVATFVRIP 183
           ++ SYRCK  D+I V+ ++     +      + R   +P++++      +       RI 
Sbjct: 115 DVPSYRCKPKDIITVRDRATSYNGLRSGINESSRGDGIPDHLTFSLLEGNRSKGLVNRI- 173

Query: 184 SSLKDVPYPVIMQP 197
                    + +  
Sbjct: 174 --ANRESIDLNINE 185


>gi|121730284|ref|ZP_01682658.1| topoisomerase IV subunit A [Vibrio cholerae V52]
 gi|121627964|gb|EAX60527.1| topoisomerase IV subunit A [Vibrio cholerae V52]
          Length = 102

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 4/105 (3%)

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE- 161
             F  T   ARQ V+H+ +LVNG+ VN+ S+     DV+ V++K+K+ + +  A ++AE 
Sbjct: 1   MGFGATRAEARQLVSHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQ 60

Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+ P +I V+ + M  TF R+P           +   L+VE YS+
Sbjct: 61  REKPTWIEVDVNTMEGTFKRMPERSD---LSADINEQLIVELYSK 102


>gi|51458136|gb|AAU03417.1| ribosomal protein small subunit 4 [Asplenium trichomanes subsp.
           trichomanes]
 gi|51458138|gb|AAU03418.1| ribosomal protein small subunit 4 [Asplenium trichomanes subsp.
           inexpectans]
          Length = 169

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 8/143 (5%)

Query: 68  KKF-RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
            +F   +  +  R+RG T    +  LE RLD +++      TI AARQ VNHRH+LVN  
Sbjct: 29  SQFCVRLEAKQRRTRGSTGQVPLQLLEMRLDNVLFHLGMASTIPAARQLVNHRHILVNNC 88

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIP 183
            V+I SYRCK  D+I V+ +     ++   S + ++  P++++V     D       R+ 
Sbjct: 89  IVDIPSYRCKPKDLITVRNRPTSCNALRNKSLVGDKT-PDHLTVSLSEGDRPTGLVNRV- 146

Query: 184 SSLKDVPYPVIMQPNLVVEFYSR 206
                    + +   LVVE+YSR
Sbjct: 147 --ANRESINLNINELLVVEYYSR 167


>gi|11466526|ref|NP_044775.1| ribosomal protein S4 [Reclinomonas americana]
 gi|3914928|sp|O21263|RT04_RECAM RecName: Full=Ribosomal protein S4, mitochondrial
 gi|2258356|gb|AAD11890.1| ribosomal protein S4 [Reclinomonas americana]
          Length = 249

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 46/249 (18%)

Query: 1   MSKRESSKHKIDRRIGENLWGRP-----KSPVNTRSYGPGLHGQRRKSKPSY-------- 47
           M+KR SSK K+  + G N+WG+       +  +     PG H ++ K    Y        
Sbjct: 1   MTKRLSSKQKVYTQTGINIWGKGPFLWKNNTKDKWKNTPGEHKKKHKLLERYSPMIRGDS 60

Query: 48  --------------------------FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
                                     +  QL+ KQK++K+Y +++EK+F + + +A   +
Sbjct: 61  INEMNQLGYLIPKSKNEVKISYYEPRYASQLKEKQKLRKFYANVTEKQFYNYYVKAKSFK 120

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           G    NLI  LE RLD I+YRA FV +I+ AR  VNH+HVLVN +  NI SY  + GD+I
Sbjct: 121 GKIGDNLIKMLERRLDIIIYRAGFVNSIYQARLLVNHKHVLVNNKIQNISSYLVQNGDMI 180

Query: 142 EVKQKSKQLAS------VLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIM 195
            +K +   L        +L+ S  +      Y+ V++  M   ++  P  + ++ +P  +
Sbjct: 181 SIKPEIVNLLRNQYNWDILQKSNGSFLKYLPYLEVDYKTMSCIYLYTPE-MNEIYFPFQL 239

Query: 196 QPNLVVEFY 204
             N V+ +Y
Sbjct: 240 DMNKVIRYY 248


>gi|270289723|ref|ZP_06196025.1| 30S ribosomal protein S4 [Chlamydia muridarum Weiss]
          Length = 147

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 2/144 (1%)

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            I EK+    +KE    +G+ +   +   E RLD IVYR  F  TIFAA+Q V+H HVLV
Sbjct: 1   MILEKQLVKAYKEVVHKQGNVAQMFLEKFECRLDNIVYRLGFAKTIFAAQQLVSHGHVLV 60

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRI 182
           NG+ V+  S+  + G  I +K+KS++LA V E+ +   +  +P Y+S++        V  
Sbjct: 61  NGKKVDRRSFFVRPGMQISLKEKSRRLAIVTESLENKDQSSLPAYLSLDKAAFKGELVVS 120

Query: 183 PSSLK-DVPYPVIMQPNLVVEFYS 205
           P   +     P+ +  +++ EF S
Sbjct: 121 PELDQISSQLPLPVNVSVICEFLS 144


>gi|162423598|gb|ABX89571.1| small ribosomal protein 4 [Agathis alba]
          Length = 216

 Score =  114 bits (285), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 45/229 (19%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + K+ RR+ +         ++             K K S + ++L  KQK++ +YG +++
Sbjct: 1   RIKLIRRLKDLPGLTKYRRIDRE-----------KEKKSRYRIRLEEKQKLRFHYG-LTD 48

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A R+ G T   L+  LE RLD I++R     TI  ARQ V HRH+LVN R 
Sbjct: 49  RQLLQYVRIARRAEGSTGEVLLQLLEMRLDNIIFRLDMTLTIPGARQLVCHRHILVNSRI 108

Query: 128 VNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE--------------------- 166
           V+  SYRC   DVI +K + +    + +   L+++                         
Sbjct: 109 VDKPSYRCNPYDVITIKDQQRSRNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKK 168

Query: 167 ---------YISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                    +++++         RI    +     + +   LV+E++SR
Sbjct: 169 QEMRQYSQIHLTLDPFRYKGVVNRIIDITR---INLNINELLVIEYFSR 214


>gi|32401860|gb|AAP80918.1| small ribosomal protein 4 [Agathis australis]
          Length = 207

 Score =  114 bits (285), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 38/207 (18%)

Query: 34  PGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLI 89
           PGL   RR    K K S + ++L  KQK++ +YG +++++     + A R+ G T   L+
Sbjct: 3   PGLTKYRRIDREKEKKSRYRIRLEEKQKLRFHYG-LTDRQLLQYVRIARRAEGSTGEVLL 61

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             LE RLD I++R     TI  ARQ V HRH+LVNGR V+  SYRC   DVI +K + + 
Sbjct: 62  QLLEMRLDNIIFRLGMTLTIPGARQLVCHRHILVNGRIVDKPSYRCNPYDVITIKDQQRS 121

Query: 150 LASVLEASQLAERDVPE------------------------------YISVNHDNMVATF 179
              + +   L+++                                  +++++        
Sbjct: 122 RNIIKKNIDLSKKHQQRSRLISKRIIKRKKILFFLFKKQEMRQYSQIHLTLDPFRYKGVV 181

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI    +     + +   LV+E++SR
Sbjct: 182 NRIIDITR---INLNINELLVIEYFSR 205


>gi|111283702|gb|ABH09201.1| small ribosomal protein 4 [Geocalyx caledonicus]
          Length = 142

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 10/150 (6%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            +PKS    RS            K S + ++L  KQK++ +YG ++E++     + A ++
Sbjct: 2   LKPKSSYIDRSI--------SNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYVRIARKA 52

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N  +V+I SY C+ GD+
Sbjct: 53  KGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHRHISINNDTVDIPSYNCEPGDI 112

Query: 141 IEVKQKSKQLASVLEASQLAER-DVPEYIS 169
           I VK K K    V +   L ++  +P +++
Sbjct: 113 ITVKTKQKSQLIVTKNINLFQKLKIPSHLT 142


>gi|86438914|emb|CAJ55429.1| small ribosomal protein 4 [Plagiochila pleurata]
          Length = 135

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 4/139 (2%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           + KI RR+G       K+  +  SY   +       K S + ++L  KQK++ +YG ++E
Sbjct: 1   RVKIIRRLGXLPGLTSKTLKSKSSY---IDRSTSNKKVSQYRIRLEEKQKLRFHYG-LTE 56

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           ++     + A +++G T   L+  LE RLD  ++R    PTI  ARQ VNHRH+ +N   
Sbjct: 57  RQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGXXPTIPGARQLVNHRHISINNDI 116

Query: 128 VNIGSYRCKEGDVIEVKQK 146
           V+I SY C+ GD+I ++ K
Sbjct: 117 VDIPSYNCEPGDIITIRNK 135


>gi|60202594|gb|AAX14686.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum]
          Length = 140

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 4/142 (2%)

Query: 66  SEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
            EK+     KEA R +G T   L+  LE RLDT+ +   F  ++  ARQ VNH H+ +N 
Sbjct: 1   LEKQLFRYVKEARRRQGVTGLILLQLLEMRLDTLCFTLGFAKSLAQARQLVNHGHITINK 60

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPS 184
           + V+I S++C+  D+I +K+KS     V    +  + R++P ++  +   + A  +    
Sbjct: 61  KVVSIPSFQCRLNDIISIKEKSSSKTLVETNIKNNQVREIPTHLRFDTVKLGAIVLDYCD 120

Query: 185 SLKDVPYPVIMQPNLVVEFYSR 206
                   + +   LV+E YSR
Sbjct: 121 RND---VSLQLDELLVIEHYSR 139


>gi|292559409|gb|ADE32410.1| ribosomal protein S4 [Streptococcus suis GZ1]
          Length = 115

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 3/112 (2%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK++ 
Sbjct: 1   MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRF 59

Query: 61  YYGDISEKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFA 111
            YG + EK+FR++F +A + +  T   N +  LE RLD +VYR     T   
Sbjct: 60  SYG-LGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRLGLATTRRQ 110


>gi|310707258|gb|ADP08974.1| Rps4 [Lindsaea diplosora]
          Length = 136

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 1/135 (0%)

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A +++G T   L+  LE RLD I+++     TI AARQ VNHRH+ VN R V++ 
Sbjct: 1   KYVRIARKTKGSTGQVLLQLLEMRLDNILFQLGLASTIPAARQLVNHRHIFVNHRIVDVP 60

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPY 191
           SYRCK  D+I ++ +       + +    E D+P +++ +          + S       
Sbjct: 61  SYRCKPKDIITIRHQLISYNK-MSSKSFGEGDIPHHLTASLSENNRPVGFVNSIANRECV 119

Query: 192 PVIMQPNLVVEFYSR 206
            + +   LVVE+YSR
Sbjct: 120 DLNINELLVVEYYSR 134


>gi|29422367|gb|AAO84579.1| small ribosomal protein 4 [Bartramia halleriana]
          Length = 130

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 2/128 (1%)

Query: 46  SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105
           S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R   
Sbjct: 1   SQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGM 59

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164
            PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K  A + +     ++  +
Sbjct: 60  APTIPGARQLVNHRHILVNDRIVDIPSYRCKPQDFITIKDRQKSQAIISKNIDFYQKYKI 119

Query: 165 PEYISVNH 172
           P +++ N 
Sbjct: 120 PNHLTYNS 127


>gi|305672205|gb|ADM63526.1| ribosomal protein S4 [Goodenia ovata]
          Length = 141

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 9/150 (6%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           K  RR+G       KS  + R   P         K S + ++L+ KQ+M  +YG ++E++
Sbjct: 1   KKIRRLGTLPGLSTKSECDLRKKPP-------PWKQSQYFIRLKEKQRMSLHYG-LTERQ 52

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A +++G+TS  L+  LE RLD I++R   V T+  ARQ V HRH+LVNGR V+
Sbjct: 53  LLKYVRIAGKAKGETSRVLLQLLEMRLDNILFRLGMVTTLPGARQLVTHRHILVNGRIVD 112

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           I SYRCK  D IE +   +  A + +    
Sbjct: 113 IPSYRCKPQDTIEARDD-QSRALIQKYIAA 141


>gi|296399261|gb|ADH10436.1| ribosomal protein S4 [Selaginella moellendorffii]
 gi|296399281|gb|ADH10456.1| ribosomal protein S4 [Selaginella moellendorffii]
          Length = 193

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + KI RR G +     K P     Y    +     +K   + ++   KQ+ + 
Sbjct: 1   MSRHRGPRAKIVRRPGRSPGPTRKRPNKKPGYA---NQSTPTTKAPPYRIRSEEKQRSRF 57

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
           ++G  +E++     + A R++G T    +  LE+R D I+ R     TI  ARQ V H H
Sbjct: 58  HHGP-TEQQSLRYVRLARRAKGSTGQVSLQSLETRSDNIIPRLGMASTIPGARQSVTHEH 116

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
              N  ++NI SYR +  D I V+Q  +   S     +  +  +               V
Sbjct: 117 TPANDHAINIPSYRREPTDAIAVRQPFRGGNSSNRIGEQNDSTLYP--------RAGLAV 168

Query: 181 RIPSSLKDVPYPVIMQPNLVVEF 203
           +                   VE+
Sbjct: 169 QPVDRK---WIDPNTNELPAVEY 188


>gi|32401840|gb|AAP80908.1| small ribosomal protein 4 [Podocarpus matudae var. reichei]
          Length = 217

 Score =  111 bits (277), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 38/214 (17%)

Query: 30  RSYGPGLHGQRR----KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTS 85
           R+  PGL   RR    K K S + ++L  KQK++ +YG +++++     + A R++G T 
Sbjct: 3   RNNLPGLTKYRRVDREKEKKSRYRIRLEEKQKVRFHYG-LTDRQLLQYVRIARRAKGSTG 61

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
             L+  LE RLD I++R     TI  ARQ VNHRH+LVNGR V+I SYRC   DVI +K 
Sbjct: 62  QVLLQLLEMRLDNILFRLGMALTIPGARQLVNHRHILVNGRMVDIPSYRCNPKDVITIKD 121

Query: 146 KSKQLASVLEASQLAER------------------------------DVPEYISVNHDNM 175
           + + +  + +   L+++                                P +++++    
Sbjct: 122 RQRSMNIITKNLDLSKKHQERSRLISKRIINRKFILFFRFKKHFMKHTXPFHLTLDSXRY 181

Query: 176 VATFVR--IPSSLKDVP-YPVIMQPNLVVEFYSR 206
                   I + + D     + +    V+E +SR
Sbjct: 182 KGVVKYKGIVNRIIDSTGIGLNINELXVIENFSR 215


>gi|270356482|gb|ACZ80496.1| ribosomal protein 4 [Ephedra major subsp. procera]
          Length = 158

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 9/162 (5%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + + L+ KQK++ +YG ++E++ R     A  ++G T   L+  LE RLD I++R 
Sbjct: 1   KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161
               TI  ARQ VNHRH+LVN   V+I SYRCK  D+I +K K  +   +       +  
Sbjct: 60  GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119

Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
                VP Y++ N         +I  +       + ++  LV
Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEMLV 158


>gi|107770432|gb|ABF83757.1| small ribosomal protein 4 [Taxus cuspidata]
          Length = 175

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 8/178 (4%)

Query: 12  DRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFR 71
             R+        K P   R   P      +  KPS + ++L+ KQ+++ +YG ++E++  
Sbjct: 1   INRLKTLPGLSKKKP--NRIEEPRTKKHHKSPKPSKYPIRLKEKQRVRFHYG-LTERQLL 57

Query: 72  SIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              + A RS+G T   L+  LE RLD I++R     TI  ARQ V+HRH+LVN R V+I 
Sbjct: 58  QYARIARRSKGSTGQVLLQLLEMRLDNIIFRLGMALTIPGARQLVSHRHILVNDRIVDIP 117

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYISVNHDN--MVATFVRIPS 184
           SYRCK  D+I +K + + +  +     L++RD   VP ++++       +    +I  
Sbjct: 118 SYRCKPQDLISIKDQQRSINIINNNIDLSQRDKMRVPNHLNLLKKKSQYIGLVKKIID 175


>gi|119898662|ref|YP_933875.1| partiell 30S ribosomal protein S4, truncated [Azoarcus sp. BH72]
 gi|152060921|sp|A1K833|RS4L_AZOSB RecName: Full=Ribosomal protein S4-like protein
 gi|119671075|emb|CAL94988.1| partiell 30S ribosomal protein S4, truncated [Azoarcus sp. BH72]
          Length = 115

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 2/109 (1%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRR-KSKPSYFGLQLRAKQKMK 59
           MS+    + KI R +G +L G  +  +  R+  PG HG R+  ++ S FGLQL  KQK++
Sbjct: 1   MSRYTGPRLKIMRALGVDLPGLGRKSMQERNQPPGQHGARKVAARKSEFGLQLMEKQKLR 60

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108
             YG ++E++ R +  +A R +G T   ++  LE RLD +V+RA F PT
Sbjct: 61  YNYG-VTERQLRRVVLDAKRQKGVTGGKIVELLERRLDNLVFRAGFAPT 108


>gi|29422403|gb|AAO84597.1| small ribosomal protein 4 [Philonotis vescoana]
          Length = 139

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           ++      K S + ++L   QK++ +YG I+E++  +  + A +++G T   L+  LE R
Sbjct: 7   INQSTSNKKISQYRIRLEENQKLRFHYG-ITERQLLNYVRIARKAKGSTGEVLLQLLEMR 65

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD +++R    PTI  ARQ VNHRH+LVN R V+I SYRCK  D I +K + K  A + +
Sbjct: 66  LDNVIFRLGMAPTIPGARQLVNHRHILVNNRIVDIPSYRCKPQDFITIKDRQKSQAIISK 125

Query: 156 ASQLAER-DVPEYI 168
                ++  +P ++
Sbjct: 126 NIDFYQKYKIPNHL 139


>gi|190361227|gb|ACE76918.1| ribosomal protein small subunit 4 [Polyphlebium angustatum]
          Length = 173

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 9/159 (5%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           +     + K S F ++L+AKQK++  YG  +E++     + A R++G T   L+  LE R
Sbjct: 16  IRSATDQRKISQFCVRLQAKQKLRFNYGS-TERQLLKYVRIARRAKGSTGQVLLQLLEMR 74

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS----KQLA 151
           LDTIVY+    PTI +ARQ VNHRH+LVN   V+I SYRCK  D+I +K +S    K+ +
Sbjct: 75  LDTIVYQLGMAPTIPSARQLVNHRHILVNNHIVDIPSYRCKPKDLITLKSRSSLSYKEQS 134

Query: 152 SVLEASQLAERDVPEYISVNHDN----MVATFVRIPSSL 186
           ++        +  P++++V+ D            I +  
Sbjct: 135 TLKLLYTSWTKKRPDHLTVSSDEGKRPKEGLVNAIANRE 173


>gi|32401894|gb|AAP80935.1| small ribosomal protein 4 [Platycladus orientalis]
          Length = 199

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 11/201 (5%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKF 70
           +  R+        K+P   R   P      +  KP  + ++L+  Q+++ +YG + E++ 
Sbjct: 3   LISRLKTLPGLSKKTP--NRIKKPIKKKHFKPIKPXKYPVRLKEXQRLRFHYG-LPERQL 59

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
               + A R++G T    +  LE RLD I++R     TI  ARQ VNHRH+LV GR V I
Sbjct: 60  LQYVRIARRAKGSTGQVXLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVXGRIVXI 119

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYIS--VNHDNMVATFVRIPSS 185
            SYRCK  D+I +K+K      + +     ++D    P +++             +I   
Sbjct: 120 PSYRCKPQDLIXIKEKEGSKNRIKKNXDXFQKDKXRXPPHLNRIKQKSXYXGLVKKIXDX 179

Query: 186 LKDVPYPVIMQPNLVVEFYSR 206
            +     + +   LV  +YSR
Sbjct: 180 KRX---GLKINELLVXXYYSR 197


>gi|78102715|gb|ABB21571.1| small ribosomal protein 4 [Plagiochila ramosissima]
          Length = 124

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 46  SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKF 105
           S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE RLD  ++R   
Sbjct: 2   SQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRLDNTIFRLGM 60

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164
            PTI  ARQ VNHRH+ +N   V+I SY C+ GD+I ++ K K  + V +     ++  +
Sbjct: 61  SPTIPGARQLVNHRHISINNDIVDIPSYNCEPGDIITIRNKQKSQSIVTKNINSFQKLKI 120

Query: 165 PEYI 168
           P ++
Sbjct: 121 PNHL 124


>gi|270356494|gb|ACZ80502.1| ribosomal protein 4 [Ephedra sarcocarpa]
          Length = 157

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 9/161 (5%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + + L+ KQK++ +YG ++E++ R     A  ++G T   L+  LE RLD I++R 
Sbjct: 1   KKSQYLVCLQEKQKIRFHYG-LTERQLRQYVHIAKNAQGSTGQVLLQLLEMRLDNILFRL 59

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-- 161
               TI  ARQ VNHRH+LVN   V+I SYRCK  D+I +K K  +   +       +  
Sbjct: 60  GIARTIPGARQLVNHRHILVNHHIVDIPSYRCKPQDIITLKGKDPERLRIRMKKSWGQLW 119

Query: 162 ---RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNL 199
                VP Y++ N         +I  +       + ++  L
Sbjct: 120 KNRNRVPHYLTFNLSQNKGIVNKIIDTKD---LQLKIKEML 157


>gi|32401892|gb|AAP80934.1| small ribosomal protein 4 [Thujopsis dolabrata]
          Length = 195

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 10/193 (5%)

Query: 19  LWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD 78
           L G  K   N R   P      +  KPS +  +L+ KQ+++ +YG +  ++     + A 
Sbjct: 6   LPGLSKKTSN-RIKKPIKKKHSKPIKPSKYPXRLKEKQRLRFHYG-LPXRQLLQYVRIAR 63

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++G T    +  LE RLD I++R     TI  ARQ VNHRH+LV GR VNI SYR K  
Sbjct: 64  RAKGSTGQVXLQLLEMRLDNILFRLGMALTIPEARQLVNHRHILVXGRIVNIPSYRXKPQ 123

Query: 139 DVIEVKQKSKQLASVLEASQLAERD---VPEYISV--NHDNMVATFVRIPSSLKDVPYPV 193
           D+I +K+    +  + +      +D    P +++         A   +I  + +     +
Sbjct: 124 DLISIKENQGLINIINKNRDXFXKDNMRXPPHLNXINKKSQYXALVNKIIDNKR---IGL 180

Query: 194 IMQPNLVVEFYSR 206
            +   LV  +YSR
Sbjct: 181 XINELLVXXYYSR 193


>gi|255961340|ref|YP_003097522.1| ribosomal protein S4 [Selaginella moellendorffii]
 gi|255961359|ref|YP_003097541.1| ribosomal protein S4 [Selaginella moellendorffii]
 gi|254941512|gb|ACT89027.1| ribosomal protein S4 [Selaginella moellendorffii]
 gi|254941531|gb|ACT89046.1| ribosomal protein S4 [Selaginella moellendorffii]
          Length = 194

 Score =  107 bits (268), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 15/202 (7%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR G +     K P     Y    +     +K   + ++   KQ+ + +
Sbjct: 2   SRHRGPRAKIVRRPGRSPGPTRKRPNKKPGYA---NQSTPTTKAPPYRIRSEEKQRSRFH 58

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           +G  +E++     + A R++G T    +  LE+R D I+ R     TI  ARQ V H H 
Sbjct: 59  HGP-TEQQSLRYVRLARRAKGSTGQVSLQSLETRSDNIIPRLGMASTIPGARQSVTHEHT 117

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181
             N  ++NI SYR +  D I V+Q  +   S     +  +  +               V+
Sbjct: 118 PANDHAINIPSYRREPTDAIAVRQPFRGGNSSNRIGEQNDSTLYP--------RAGLAVQ 169

Query: 182 IPSSLKDVPYPVIMQPNLVVEF 203
                              VE+
Sbjct: 170 PVDRK---WIDPNTNELPAVEY 188


>gi|11467160|ref|NP_054461.1| ribosomal protein S4 [Marchantia polymorpha]
 gi|417729|sp|P26866|RT04_MARPO RecName: Full=Ribosomal protein S4, mitochondrial
 gi|250822|gb|AAB22414.1| ribosomal protein S4 [Marchantia polymorpha=liverwort, Peptide
           Mitochondrial, 196 aa]
 gi|786244|gb|AAC09458.1| rps4 [Marchantia polymorpha]
          Length = 196

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 10/197 (5%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           S+ K+ R+I EN+W   K  +  +     L  Q++  K S F +QL+  +K+  +YG++ 
Sbjct: 4   SRFKVCRQILENVWQTKKLTLKQKFLISELQKQKKNKKQSDFSIQLQTIKKLSLFYGNLP 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
            KK +        +  D  ++L+  +E RLD I+ R  F  T+F ARQ ++H+++ VN +
Sbjct: 64  IKKMQR---AKTHTYIDKKNSLLFNIEKRLDVILVRLNFCSTMFQARQLISHKNICVNYK 120

Query: 127 SVNIGSYRCKEGDVIEVKQKS----KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
            VNI  ++   GD+I +++ S    K        +    R  P ++ VN+  + A  +  
Sbjct: 121 KVNIPGFQVSNGDLISIQENSLDFFKSNIRKNFQTNRIRRMKPNHLEVNYKTLKAVVLYE 180

Query: 183 PSSLKDVPYPVIMQPNL 199
           P   + + +P  +  +L
Sbjct: 181 P---QQIQFPYKIDLDL 194


>gi|254437691|ref|ZP_05051185.1| hypothetical protein OA307_2561 [Octadecabacter antarcticus 307]
 gi|198253137|gb|EDY77451.1| hypothetical protein OA307_2561 [Octadecabacter antarcticus 307]
          Length = 91

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 56/88 (63%), Positives = 69/88 (78%), Gaps = 1/88 (1%)

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
           NH HV VNG+ VNI SYR KEGD++EV+  SKQ  +VL+A  LAERDVP+Y+ V+H  M 
Sbjct: 2   NHGHVTVNGKKVNIPSYRVKEGDIVEVRDSSKQNVAVLDAIGLAERDVPDYMDVDHSKMS 61

Query: 177 ATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
           ATFVR P  L DVPYPV+M+PNLV+E+Y
Sbjct: 62  ATFVRTPG-LGDVPYPVMMEPNLVIEYY 88


>gi|118577577|gb|ABL07154.1| small ribosomal protein 4 [Piper glabratum]
          Length = 101

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DV 164
             TI  ARQ VNHRHVLVNGR V+I SYRCK  D+I  + + +    V  +   A R ++
Sbjct: 1   ASTIPGARQLVNHRHVLVNGRIVDIPSYRCKPRDIITTRNEQRSKVLVQNSMDSASREEL 60

Query: 165 PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           P++++++         +I  S       + +   LVVE+YSR
Sbjct: 61  PKHLTLDSSQYKGVVNQIIDSK---GVGLKINELLVVEYYSR 99


>gi|89031446|gb|ABD59460.1| Rps4 [Passiflora coriacea]
          Length = 171

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 13/137 (9%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           + S +  +L+ KQ+++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 29  RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    + ++       
Sbjct: 88  GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKDEQKSKDMIKKSLDSLDMI 147

Query: 158 ------QLAERDVPEYI 168
                     + +P ++
Sbjct: 148 KKSLDDSSPRKKLPTHL 164


>gi|262186756|ref|YP_003276015.1| ribosomal protein S4 [Pleurozia purpurea]
 gi|237780753|gb|ACR19399.1| ribosomal protein S4 [Pleurozia purpurea]
          Length = 196

 Score =  102 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           S+ K+ R+I EN+W   K  +        L    +  K S F +QLR  +K+  +YG++ 
Sbjct: 4   SRFKVCRQILENVWQTKKLTLKQELLISELRKNEKNKKQSDFSVQLRTMKKLSLFYGNLP 63

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
            +K +       R+  D  ++L+  +E RLD I+ R  +  T+F ARQ ++H+++ VN +
Sbjct: 64  IRKMQR---AKTRTYIDKKNSLLFNIEKRLDVILVRLNYCSTMFQARQLISHQNICVNYK 120

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAE--RDVPEYISVNHDNMVATFVRI 182
            VNI  ++   GD+I +++ S     +++    +     R  P ++ VN+  + A  +  
Sbjct: 121 KVNIPGFQVSNGDLISIQENSLAFFESNIRRNLRTNRIGRMKPNHLEVNYKTLKAVVLYE 180

Query: 183 PSSLKDVPYPVIMQ 196
           P  +   PY + + 
Sbjct: 181 PQQI-RFPYKIDLD 193


>gi|89031448|gb|ABD59461.1| Rps4 [Passiflora xiikzodz]
 gi|89031450|gb|ABD59462.1| Rps4 [Passiflora coriacea x Passiflora xiikzodz]
          Length = 171

 Score =  102 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 13/137 (9%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           + S +  +L+ KQ+++ +YG ++E++     + A +++G T   L+  LE RLD I++R 
Sbjct: 29  RKSQYCRRLQEKQRLRFHYG-LTERQLLKYVRIATKAKGLTGQVLLQLLEMRLDNILFRL 87

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS------ 157
               TI  ARQ VNHRH+LVN R V+I SYRCK  D+I VK + K    + ++       
Sbjct: 88  GMASTIPQARQLVNHRHILVNDRMVDIPSYRCKPRDLITVKNEQKSKDMIKKSLDSLDMI 147

Query: 158 ------QLAERDVPEYI 168
                     + +P ++
Sbjct: 148 KKSLDDSSPRKKLPTHL 164


>gi|51458163|gb|AAU03430.1| ribosomal protein small subunit 4 [Asplenium fontanum]
          Length = 167

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 8/138 (5%)

Query: 68  KKF-RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
            +F   +  +  R+RG T    +  LE RLD +++      TI AARQ VNHRH+LVN  
Sbjct: 20  SQFCVRLEAKQRRTRGSTGQVPLQLLEMRLDNVLFHLGMASTIPAARQLVNHRHILVNNC 79

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIP 183
            V+I SYRCK  D I V+ +     ++   S + ++  P++++V     D       R+ 
Sbjct: 80  IVDIPSYRCKPKDFITVRNRPTSCNALRNKSLVGDKT-PDHLTVSLSEGDRPTGLVNRV- 137

Query: 184 SSLKDVPYPVIMQPNLVV 201
                    + +   LVV
Sbjct: 138 --ANRESINLNINELLVV 153


>gi|67968333|dbj|BAE00233.1| ribosomal protein S4 [Selaginella uncinata]
 gi|67968354|dbj|BAE00254.1| ribosomal protein S4 [Selaginella uncinata]
          Length = 196

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 18/205 (8%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+    + KI RR G +     K P   +           K     + ++   KQ+ + +
Sbjct: 2   SRHRGPRAKIVRRPGRSPGPTRKRPAGRKPGYANQSTPTTK--APQYRIRSEEKQRSRLH 59

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           +G  +E++     + A R++G T    +   E+R D I+ R     T   ARQ V H   
Sbjct: 60  HGP-TEQQSLRYVRIAKRAKGSTGQVSLQSPETRSDNIIPRLGAASTTPGARQSVTHERA 118

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM---VAT 178
             N R++++ SYR K  D I  +Q S+  +    ++++ E+        +H  +      
Sbjct: 119 PANDRAISVPSYRRKPADAIAARQ-SRCRSVGNSSNRIGEQ--------DHSTLYPHAGL 169

Query: 179 FVRIPSSLKDVPYPVIMQPNLVVEF 203
            VR                +L VE+
Sbjct: 170 AVRPVDRK---WIDPNTNESLAVEY 191


>gi|113170474|ref|YP_717265.1| Rps4 [Ostreococcus tauri]
 gi|112806881|emb|CAL36387.1| unnamed protein product [Ostreococcus tauri]
          Length = 209

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 10/200 (5%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K K  R+ G  LW      +         + +    K S F LQLRAKQ +   YG +  
Sbjct: 8   KGKPCRKFGAFLWKTRTFTIKQEKAVSLANKKVNTKKLSNFALQLRAKQLVSALYGQLKL 67

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           + F+ + +++ + RG  +H   S LE RLD+ + + KF PT  AARQ +NH+ V +NG  
Sbjct: 68  QHFKHLLQQSQKYRGKLAHIFFSLLEKRLDSCLVQLKFAPTFLAARQLINHKKVCINGNI 127

Query: 128 VNIGSYRCKEGDVIEVKQKSKQL--ASVLEASQLAERD-----VPEYISVNHDNMVATFV 180
           +       K GD +    + +    ++V  A  L +        P +  VN+  + A F+
Sbjct: 128 ITAPGVLLKPGDSVSFIPEIQTRVASNVQTACALHDSKKVLAYKPLHFEVNYKTLEAIFL 187

Query: 181 RIPSSLKDVPYPVIMQPNLV 200
             P   + V YP  ++P LV
Sbjct: 188 FSP---QQVHYPTRIEPELV 204


>gi|33413239|emb|CAD86772.1| ribosomal protein small subunit 4 [Phascum cuspidatum]
          Length = 134

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S + ++L  KQK++ +YG I+E++  +  + A +++G T   L+  LE RLD +++R 
Sbjct: 19  KISQYRIRLEEKQKLRFHYG-ITERQLLNYVRIARKAKGSTGQILLQLLEMRLDNVIFRL 77

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
              PTI  ARQ VNHRH+LVN R VNI SYRCK  D I + ++ K    + +    +
Sbjct: 78  GMAPTIPGARQLVNHRHILVNNRIVNIPSYRCKPQDFITINERKKSQIMITKNVDFS 134


>gi|16930560|gb|AAL31958.1| ribosomal protein small subunit 4 [Cyclosorus interruptus]
          Length = 120

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
            +  LE RLD +++      TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ + 
Sbjct: 1   PLQLLEMRLDNVIFNLGMASTIPAARQLVNHRHILVNNHIVDIPSYRCKPRDIITIRNRP 60

Query: 148 KQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
               + L        + P+++++     +       R+          + +   LVVE+Y
Sbjct: 61  TSHNA-LGGESSVGVETPDHLTISLMEGNRPAGLVNRV---ANRESVNLSINELLVVEYY 116

Query: 205 SR 206
           SR
Sbjct: 117 SR 118


>gi|218176246|ref|YP_002364503.1| ribosomal protein S4 [Festuca arundinacea]
 gi|215882330|gb|ACJ70760.1| ribosomal protein S4 [Festuca arundinacea]
          Length = 144

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           MS+    + K  RR+G       K+P      G  L  +    K   + ++L+ KQK++ 
Sbjct: 1   MSRYRGPRLKKIRRLGALPGLTRKTP----KSGSNLKNKFHSGKKEQYRIRLQEKQKLRF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +YG ++E++       A +++  T   L+  LE RLD I++R     TI  ARQ V 
Sbjct: 57  HYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVK 112


>gi|11466639|ref|NP_066322.1| ribosomal protein S4 [Malawimonas jakobiformis]
 gi|10178677|gb|AAG13689.1|AF295546_15 ribosomal protein S4 [Malawimonas jakobiformis]
          Length = 225

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 117/218 (53%), Gaps = 24/218 (11%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK--- 57
           M+KR   K++I ++IGE+LWG+    +N  +   G HG+ +K +     +     +K   
Sbjct: 1   MTKRFKQKYRICKQIGEDLWGKLNKKINY-NVRSGQHGKIKKKRKEIAFIYKDNNKKKIN 59

Query: 58  ----------MKKYYGDISEKKFRSIFKE----ADRSRGDTSHNLI-SFLESRLDTIVYR 102
                     ++K+Y +IS+K+F ++FK+       ++ +T+   + + LE RLDTI++R
Sbjct: 60  TVNKTQFIYKLRKFYSNISKKQFDNLFKKGNLLNANNKYNTNSKYLINLLERRLDTILFR 119

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
             +  + F ARQ +NH H+L+NG  VN+ S+    GD IEVK+ S++L       ++  +
Sbjct: 120 INWASSFFNARQLINHGHILINGNIVNVSSHLVNIGDKIEVKKDSQKLLKKNLIDRIKNK 179

Query: 163 DV----PEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
            +    P YI VN++ + A  +  P+    VP+P I  
Sbjct: 180 QITINCPSYIEVNYNILCAIVIFNPT-ESFVPFPTIKN 216


>gi|78102723|gb|ABB21575.1| small ribosomal protein 4 [Plagiochila trapezoidea]
          Length = 132

 Score = 99.6 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 1/124 (0%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
                K S + ++L  KQK++ +YG ++E++     + A +++G T   L+  LE R D 
Sbjct: 6   STPNKKVSQYRIRLEEKQKLRFHYG-LTERQLLKYMRIARKAKGSTGQVLLQLLEMRPDN 64

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            ++R    PTI  ARQ VNHRH+ +N   VNI SY C+ GD+I +  K K  + V +   
Sbjct: 65  TIFRLGMSPTIPGARQLVNHRHISINNDIVNIPSYNCEPGDIITIGNKQKSQSIVTKTIN 124

Query: 159 LAER 162
              +
Sbjct: 125 SFXK 128


>gi|190361255|gb|ACE76932.1| ribosomal protein small subunit 4 [Didymoglossum membranaceum]
          Length = 128

 Score = 99.6 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 12/126 (9%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K S F ++L AKQ+++  YG ++E++  +  + A R++G T   L+  LE RLD IV++
Sbjct: 14  RKISQFCVRLEAKQRLRFNYG-LTERQLLNYIRIARRAKGSTGQVLLQLLEMRLDNIVFQ 72

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
               PTI AARQ VNHRH+LVN   VNI SYRCK  D I +K                 +
Sbjct: 73  LGMAPTIPAARQLVNHRHILVNNCIVNIPSYRCKPKDFITLKNH-----------DSFRK 121

Query: 163 DVPEYI 168
            +P ++
Sbjct: 122 TIPNHL 127


>gi|118626063|emb|CAL41752.1| small ribosomal protein 4 [Acrobolbus wilsonii]
          Length = 97

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYI 168
             ARQ VNHRH+ +N   V+I SY C  GD+I VK + K  + +++   L ++  +P ++
Sbjct: 1   PGARQLVNHRHISINNDIVDIPSYNCGPGDIITVKNERKSQSMIIKNINLFQKSKMPSHL 60

Query: 169 SVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + +   +     +  +        + +   LVVE+YSR
Sbjct: 61  TFDSTELRGFVNQTINR---EWIDLKINELLVVEYYSR 95


>gi|206587040|emb|CAQ17624.1| hypothetical 30s ribosomal protein s4 (partial sequence c
          terminus) [Ralstonia solanacearum MolK2]
          Length = 668

 Score = 97.3 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 11/102 (10%)

Query: 1  MSKRESSKHKIDRRIGENLWGRP-------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLR 53
          M++    K K+ RR G +L+ +        K  ++++   PG HG+   ++ S +G QLR
Sbjct: 1  MARYIGPKAKLSRREGTDLFLKSARRSLADKCKLDSK---PGQHGRTSGARTSDYGNQLR 57

Query: 54 AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESR 95
           KQK+K+ YG + E++FR  F EADR +G+T  NL+  LESR
Sbjct: 58 EKQKVKRIYGVL-ERQFRRYFAEADRRKGNTGENLLQLLESR 98


>gi|224542511|ref|ZP_03683050.1| hypothetical protein CATMIT_01694 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524568|gb|EEF93673.1| hypothetical protein CATMIT_01694 [Catenibacterium mitsuokai DSM
           15897]
          Length = 91

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD--VPEYISVNH 172
            V+HR V VNG+SVN+ SY+ K GD+I + +++++   V E+  ++ +    P ++ V+ 
Sbjct: 1   MVSHRGVTVNGKSVNLPSYQVKAGDIIALSERAQKQLRVQESLTVSSQMDLSPSWVEVDS 60

Query: 173 DNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                 F  +P        P  +   L+VE YS+
Sbjct: 61  KKFSGVFKAVPDRAD---LPADINEALIVELYSK 91


>gi|32401874|gb|AAP80925.1| small ribosomal protein 4 [Metasequoia glyptostroboides]
          Length = 136

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 4/125 (3%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L+ KQ+++ +YG ++E++     + A R++G T   L+  LE RLD I++R     ++  
Sbjct: 1   LKEKQRLRFHYG-LTERQLLQYVRIARRAKGSTGQVLLQLLEMRLDNILFRLGMALSMPE 59

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD---VPEYI 168
           ARQ +NHRH+ VN R V+I SYRCK  D+I +K K +    + +   + ++D   VP ++
Sbjct: 60  ARQLINHRHIRVNDRIVDIPSYRCKPQDLISIKDKQRLRNIINKNIDIFQKDKMRVPPHL 119

Query: 169 SVNHD 173
           ++   
Sbjct: 120 NLIKK 124


>gi|328775223|gb|AEB40007.1| ribosomal protein S4 [Funaria hygrometrica]
          Length = 195

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 9/194 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           S+ K  R+I EN+W   K     ++    L  +  K +   F  +L+  QK+  +YG + 
Sbjct: 4   SRFKTCRQISENVWQTKKLTQKQKAIILKLRKKTNKKQS-DFSKELQTIQKLSLFYGKLP 62

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
            KK +       ++  D  ++L+  +E RLD I+ R  F  TIF ARQ ++H+ + VN +
Sbjct: 63  IKKMQR---SKTQTYLDKKNSLLFDIERRLDVILVRLNFCLTIFQARQLISHKKICVNYK 119

Query: 127 SVNIGSYRCKEGDVIEVKQKS----KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
            VNI  ++   GD+I ++       +        S    R  P ++ VN+  + A  +  
Sbjct: 120 MVNIPGFQLSNGDLISIQDNFLYFIRSKIRQNFQSNRIWRIKPTHLEVNYKTLKAVVLYE 179

Query: 183 PSSLKDVPYPVIMQ 196
           P  ++  PY + + 
Sbjct: 180 PQQIQ-FPYSIDLD 192


>gi|91208849|ref|YP_539010.1| Ribosomal protein S4 [Physcomitrella patens]
 gi|90991389|dbj|BAE93081.1| ribosomal protein S4 [Physcomitrella patens]
          Length = 195

 Score = 96.1 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 9/194 (4%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           S+ K  R+I EN+W   K     ++    L  +  K +   F  +L+  QK+  +YG + 
Sbjct: 4   SRFKTCRQISENVWQTKKLTQKQKAIILKLRKKTNKKQS-DFSKELQTIQKLSLFYGKLP 62

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
            KK +       ++  D  ++L+  +E RLD I+ R  F  TIF ARQ ++H+ + VN +
Sbjct: 63  IKKMQR---SKTQTYLDKKNSLLFDIERRLDVILVRLNFCLTIFQARQLISHKKICVNYK 119

Query: 127 SVNIGSYRCKEGDVIEVKQKS----KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
            VNI  ++   GD+I ++       +        S    R  P ++ VN+  + A  +  
Sbjct: 120 MVNIPGFQLSNGDLISIQDNFIYFIRSKIRQNFQSNRIWRIKPTHLEVNYKTLKAVVLYE 179

Query: 183 PSSLKDVPYPVIMQ 196
           P  ++  PY + + 
Sbjct: 180 PQQIQ-FPYSIDLD 192


>gi|141446682|gb|ABO87548.1| ribosomal protein S4 [Elymus repens]
 gi|141446684|gb|ABO87549.1| ribosomal protein S4 [Elymus repens]
 gi|141446686|gb|ABO87550.1| ribosomal protein S4 [Elymus repens]
 gi|141446688|gb|ABO87551.1| ribosomal protein S4 [Elymus repens]
 gi|141446690|gb|ABO87552.1| ribosomal protein S4 [Elymus repens]
 gi|141446692|gb|ABO87553.1| ribosomal protein S4 [Elymus repens]
 gi|141446694|gb|ABO87554.1| ribosomal protein S4 [Elymus repens]
 gi|141446696|gb|ABO87555.1| ribosomal protein S4 [Elymus repens]
 gi|141446698|gb|ABO87556.1| ribosomal protein S4 [Taeniatherum caput-medusae]
 gi|141446700|gb|ABO87557.1| ribosomal protein S4 [Elymus semicostatus]
 gi|141446702|gb|ABO87558.1| ribosomal protein S4 [Hordeum bogdanii]
 gi|141446704|gb|ABO87559.1| ribosomal protein S4 [Elymus sibiricus]
 gi|141446706|gb|ABO87560.1| ribosomal protein S4 [Elymus transhyrcanus]
 gi|141446708|gb|ABO87561.1| ribosomal protein S4 [Elymus alaskanus]
 gi|141446710|gb|ABO87562.1| ribosomal protein S4 [Elymus mutabilis]
 gi|141446712|gb|ABO87563.1| ribosomal protein S4 [Elymus fibrosus]
 gi|141446714|gb|ABO87564.1| ribosomal protein S4 [Elymus transbaicalensis]
 gi|141446716|gb|ABO87565.1| ribosomal protein S4 [Elymus repens]
 gi|141446718|gb|ABO87566.1| ribosomal protein S4 [Thinopyrum intermedium]
 gi|141446720|gb|ABO87567.1| ribosomal protein S4 [Pseudoroegneria spicata]
 gi|141446722|gb|ABO87568.1| ribosomal protein S4 [Thinopyrum junceum]
 gi|141446724|gb|ABO87569.1| ribosomal protein S4 [Thinopyrum intermedium]
 gi|141446726|gb|ABO87570.1| ribosomal protein S4 [Hordeum stenostachys]
 gi|141446728|gb|ABO87571.1| ribosomal protein S4 [Elymus repens]
 gi|141446730|gb|ABO87572.1| ribosomal protein S4 [Elymus repens]
 gi|141446732|gb|ABO87573.1| ribosomal protein S4 [Elymus repens]
 gi|141446734|gb|ABO87574.1| ribosomal protein S4 [Elymus repens]
 gi|141446736|gb|ABO87575.1| ribosomal protein S4 [Elymus repens]
 gi|141446738|gb|ABO87576.1| ribosomal protein S4 [Elymus repens]
 gi|141446740|gb|ABO87577.1| ribosomal protein S4 [Elymus repens]
 gi|141446742|gb|ABO87578.1| ribosomal protein S4 [Elymus repens]
 gi|141446745|gb|ABO87579.1| ribosomal protein S4 [Hordeum vulgare]
 gi|141446749|gb|ABO87581.1| ribosomal protein S4 [Elymus repens]
 gi|141446751|gb|ABO87582.1| ribosomal protein S4 [Elymus repens]
 gi|141446753|gb|ABO87583.1| ribosomal protein S4 [Elymus repens]
          Length = 99

 Score = 94.6 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 1/98 (1%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K   + ++L+ KQK++ +YG ++E++       A +++  T   L+  LE RLD I++R 
Sbjct: 3   KKEQYRIRLQEKQKLRFHYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRL 61

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
               TI  ARQ VNHRH+LVNGR VNI S+RCK  D+I
Sbjct: 62  GMASTIPGARQLVNHRHILVNGRIVNIPSFRCKPRDII 99


>gi|42794668|gb|AAS45731.1| Rps4 [Psammisia dolichopoda]
          Length = 142

 Score = 94.6 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 1/99 (1%)

Query: 47  YFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
            + ++L+ KQK++ +YG ++E++     + A +++G T   L+  LE RLD I++R    
Sbjct: 45  QYHIRLQEKQKLRFHYG-LTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMA 103

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            TI  ARQ VNHRHVLVNGR ++I SYRCK  D+I  ++
Sbjct: 104 STIPGARQLVNHRHVLVNGRIIDIPSYRCKPRDIITARK 142


>gi|302824443|ref|XP_002993864.1| hypothetical protein SELMODRAFT_137695 [Selaginella moellendorffii]
 gi|302824531|ref|XP_002993908.1| hypothetical protein SELMODRAFT_137752 [Selaginella moellendorffii]
 gi|300138231|gb|EFJ05005.1| hypothetical protein SELMODRAFT_137695 [Selaginella moellendorffii]
 gi|300138275|gb|EFJ05049.1| hypothetical protein SELMODRAFT_137752 [Selaginella moellendorffii]
          Length = 204

 Score = 93.5 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 17/194 (8%)

Query: 11  IDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP-SYFGLQLRAKQKMKKYYGDISEKK 69
           I RR G +     K P       PG   Q   +     + ++   KQ+ + ++G  +E++
Sbjct: 1   IVRRPGRSPGPTRKRPNKK----PGYANQSTPTTKAPPYRIRSEEKQRSRFHHGP-TEQQ 55

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                + A R++G T    +  LE+R D I+ R     TI  ARQ V H H   N  ++N
Sbjct: 56  SLRYVRLARRAKGSTGQVSLQSLETRSDNIIPRLGMASTIPGARQSVTHEHTPANDHAIN 115

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDV 189
           I SYR +  D I V+Q  +   S     +  +  +               V+        
Sbjct: 116 IPSYRREPTDAIAVRQPFRGGNSSNRIGEQNDSTLYP--------RAGLAVQPVDRK--- 164

Query: 190 PYPVIMQPNLVVEF 203
                      VE+
Sbjct: 165 WIDPNTNELPAVEY 178


>gi|141446755|gb|ABO87584.1| ribosomal protein S4 [Dasypyrum villosum]
          Length = 99

 Score = 92.7 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K   + ++L+ KQK++ +YG ++E++       A +++  T   L+  LE RLD I++R 
Sbjct: 3   KKEQYRIRLQEKQKLRFHYG-LTERQLLRYVHIAGKAKRSTGQVLLQLLEMRLDNILFRL 61

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
               TI  ARQ VNHRH+LVNG  VNI S+RCK  D+I
Sbjct: 62  GMASTIPGARQLVNHRHILVNGHIVNIRSFRCKPRDII 99


>gi|38638300|ref|NP_943664.1| ribosomal protein S4 [Chara vulgaris]
 gi|32966614|gb|AAP92197.1| ribosomal protein S4 [Chara vulgaris]
          Length = 189

 Score = 91.9 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 7/195 (3%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
              SK K  R+I EN+W   K     +        +++ +K   F  +L+A +K+  +YG
Sbjct: 1   MRVSKFKTCRQILENVWQTKKLTQKQQKILS--KARKKTNKAGEFSQKLQAIKKLSIFYG 58

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
           ++  KK      +   +  D   +L+  +E RLD ++ R  F  TIF ARQ ++H+ + V
Sbjct: 59  NLPVKK----VAKKTYTYLDKQKSLLLLMEKRLDILLVRMNFCSTIFTARQLISHKKICV 114

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIP 183
           N + +   S++   GD+I ++Q  K             ++ P ++ VN+  ++A  +  P
Sbjct: 115 NNQIILRPSFQVSSGDLISIQQNCKSTIKQNIRYNRIFKNKPSHLEVNYQTLMAVLLYEP 174

Query: 184 SSLKDVPYPVIMQPN 198
             ++  PY + +   
Sbjct: 175 QQIQ-FPYHIDLDVL 188


>gi|141446747|gb|ABO87580.1| ribosomal protein S4 [Elymus repens]
          Length = 99

 Score = 91.5 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 1/98 (1%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K   + ++L+ KQK++ +YG ++E++       A +++G T   L+  LE RLD I++R 
Sbjct: 3   KKEQYRIRLQEKQKLRFHYG-LTERRLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRL 61

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
               TI  ARQ VNHRH+LVNGR VNI S+RCK  D+I
Sbjct: 62  GMASTIPGARQLVNHRHILVNGRIVNIPSFRCKPRDII 99


>gi|89147834|gb|ABD62765.1| ribosomal protein 4 [Metzgeria liebmanniana]
          Length = 126

 Score = 90.8 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K S + ++L  +Q ++ +YG ++E++     + A R++G T   L+  LE RLD I++
Sbjct: 2   NKKISQYRVRLEGRQXLRFHYG-LTERQLLKYVRIARRTKGSTGLLLLQLLEMRLDNIIF 60

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-ASQLA 160
           R   VPTI AARQ VNH H+ +N   V+I SY C+ GD+I +K + +  + ++E  + L 
Sbjct: 61  RLGMVPTIPAARQLVNHGHISINKDIVDIPSYNCELGDIITIKNQERYRSXIMERXNSLQ 120

Query: 161 ERDVPE 166
           +  +P 
Sbjct: 121 QPGIPN 126


>gi|218660338|ref|ZP_03516268.1| 30S ribosomal protein S4 [Rhizobium etli IE4771]
          Length = 75

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/74 (78%), Positives = 66/74 (89%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MSKRESSK+KIDRR+GEN+WGRPKSPVN R YGPG HGQRRK K S FG+QLRAKQK+K 
Sbjct: 1  MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60

Query: 61 YYGDISEKKFRSIF 74
          YYGD+ EK+FR+IF
Sbjct: 61 YYGDLREKQFRAIF 74


>gi|56554835|gb|AAV97983.1| Rps4 [Pteridium aquilinum subsp. feei]
          Length = 102

 Score = 89.6 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP 165
             TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S L E+ +P
Sbjct: 1   ASTIPAARQLVNHRHILVNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESLLGEK-IP 59

Query: 166 EYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++++++            RI          + +   LVVE+YSR
Sbjct: 60  DHLTLSLSEGSRPTGLVNRI---ASRESVNLNINELLVVEYYSR 100


>gi|229315915|ref|YP_002860141.1| ribosomal protein S4 [Micromonas sp. RCC299]
 gi|226431200|gb|ACO55605.1| ribosomal protein S4 [Micromonas sp. RCC299]
          Length = 239

 Score = 88.4 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 35/221 (15%)

Query: 1   MSKRESS-KHKIDRRIGENLWG----RPKSPVNTRSYGPGLHGQR----RKSKPSYFGLQ 51
           M+K  S  + K+ R+IG +LW       K              Q     RK K + F  Q
Sbjct: 1   MTKISSPFRMKVLRKIGVSLWPWRHMTLKQVEKLDKIVQKQSKQTSLLERKKKRTQFAYQ 60

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L+AKQ +K  YG+++   F S +K++ +  G ++ N  S LE RLD I+YRA FV +   
Sbjct: 61  LQAKQIVKALYGNLNTSYFISFYKKSLKMIGKSNINFFSQLERRLDCILYRANFVTSFQE 120

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV------------------ 153
           ARQ ++H+ V VN   +N   Y  K GD+I      K   ++                  
Sbjct: 121 ARQVISHQKVCVNTVKINKPGYIVKPGDIISFVSDIKDTQALSITNFLNRPATIKALNDK 180

Query: 154 -----LEASQLAERDV---PEYISVNHDNMVATFVRIPSSL 186
                     L+   V   P ++ +N+  +   ++  P  L
Sbjct: 181 GSLQSKNNRALSPTKVFYKPVHLEINYHTLTIVYLYTPQQL 221


>gi|110225639|ref|YP_665646.1| ribosomal protein S4 [Nephroselmis olivacea]
 gi|6066154|gb|AAF03172.1|AF110138_4 ribosomal protein S4 [Nephroselmis olivacea]
          Length = 238

 Score = 88.1 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 1/147 (0%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           Q+ + K S +  Q   +Q +   YG+I +K+  ++  +A R +G     LI+ LESRLD 
Sbjct: 75  QKNEQKESDYFSQFTTRQTLSSIYGNIQKKQMNNLVNQAFRRKGHAGSRLITLLESRLDV 134

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE-VKQKSKQLASVLEAS 157
           I+YRA F  +IF ARQ +NH  ++VNG   N  +     GD++  V      L + +++ 
Sbjct: 135 ILYRASFCTSIFTARQLINHNKIMVNGIISNSSALLLSPGDIVSVVHNYEMTLKNSIKSI 194

Query: 158 QLAERDVPEYISVNHDNMVATFVRIPS 184
           Q    + P Y+ ++++ M   F+  P+
Sbjct: 195 QKKNLNKPNYLEISYNLMTIVFLYAPT 221


>gi|157154427|gb|ABV24920.1| ribosomal protein small subunit 4 [Asplenium viride]
          Length = 101

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPE 166
            TI AARQ VNHRH+LVN   V+I SYRCK  D+I V+ +     ++   S + ++  P+
Sbjct: 1   STIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSLVGDKT-PD 59

Query: 167 YISV---NHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +++V     D       R+          + +   LVVE+YSR
Sbjct: 60  HLTVSLSEGDRATGLVNRV---ANRESIVLNINELLVVEYYSR 99


>gi|110598112|ref|ZP_01386390.1| Ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031]
 gi|110340244|gb|EAT58741.1| Ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031]
          Length = 84

 Score = 85.0 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          M++   S  K+ RR+G  L  + +  +  R + PG HGQ RK K S + LQLR KQKMK 
Sbjct: 1  MARFRGSITKVSRRLGVALTPKAEKYLERRPFPPGQHGQSRKGKVSEYALQLREKQKMKY 60

Query: 61 YYGDISEKKFRSIFKE 76
           YG I EK+FR+ F +
Sbjct: 61 IYG-ILEKQFRNYFMK 75


>gi|224922583|emb|CAQ19274.1| ribosomal S4 protein [Lomariopsis sp. F042]
          Length = 100

 Score = 84.6 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 5/101 (4%)

Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEY 167
           TI AARQ VNHRH+LVN   V+I SYRCK  D+I ++ +S    + L  +  A   +P++
Sbjct: 1   TIPAARQLVNHRHILVNNCIVDIPSYRCKPKDLITIRNRSTSY-NALRVTSPAGDKIPDH 59

Query: 168 IS--VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ++  ++ DN  A  V            + +   LVVE+YSR
Sbjct: 60  LTISLSEDNKPAGLVNCI--ANRESVNLNINELLVVEYYSR 98


>gi|116335038|ref|YP_802533.1| ribosomal protein S4 [Candidatus Carsonella ruddii PV]
 gi|122940454|sp|Q05FK4|RS4_CARRP RecName: Full=30S ribosomal protein S4
 gi|116235319|dbj|BAF35167.1| ribosomal protein S4 [Candidatus Carsonella ruddii PV]
          Length = 197

 Score = 82.7 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 6/150 (4%)

Query: 1   MSKRESSKHKIDRRIGENL-WGRPKSPVN--TRSYGPGLHGQRRKSKPSYFGLQLRAKQK 57
           M+K++S   K  RR GENL +   K  +     +  PG +G   K K S FGL LR KQK
Sbjct: 1   MTKKKSKNIKFCRREGENLEFFSEKKYLEKSRSNLTPGENG-TEKGKVSDFGLILRTKQK 59

Query: 58  MKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           +K+YY  I EK+F+ I+    ++  +   +LI+FLE RLD ++YR  F  +   +RQ + 
Sbjct: 60  IKRYYC-IFEKEFKKIYFIIKKNFFNN-IDLINFLERRLDNVIYRFNFSISRKESRQLII 117

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           H +V VN     I SY    GDVI + +K 
Sbjct: 118 HGNVFVNYFKNKIPSYLLSPGDVITINKKF 147


>gi|110598113|ref|ZP_01386391.1| 30S ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031]
 gi|110340245|gb|EAT58742.1| 30S ribosomal protein S4 [Chlorobium ferrooxidans DSM 13031]
          Length = 83

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFV 180
           ++NG+ VNI SY    GD+IE +Q+SK + +V ++   A E  +P +I V+  N  + F+
Sbjct: 1   MINGKKVNIPSYLVSPGDLIEFRQRSKNMDAVTDSLNKAPESRIPTWIQVDKANQKSVFL 60

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
            +P  ++           LVVE YS+
Sbjct: 61  SVPERVE---IQEPYNEQLVVELYSK 83


>gi|11466566|ref|NP_066456.1| ribosomal protein S4 [Rhodomonas salina]
 gi|10444153|gb|AAG17727.1|AF288090_3 ribosomal protein S4 [Rhodomonas salina]
          Length = 206

 Score = 81.1 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/169 (27%), Positives = 93/169 (55%), Gaps = 4/169 (2%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT 98
           +++  + S FG  L+ KQ ++ +Y +I EK F+   K A +S   T    IS LE RLD 
Sbjct: 38  RKKFRRVSNFGKLLQTKQNLRFFYCNIKEKVFKKQLKNAIKSPLKTVDKFISILEKRLDI 97

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL---E 155
           I++RA F+ +++ A+Q ++H H+++N +++   + + K+ D I++K +  ++   +    
Sbjct: 98  ILFRASFIFSLYQAKQIISHGHIMINNKTIYKLNKKLKQFDFIKLKIEKNKILKRIFDRF 157

Query: 156 ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFY 204
             ++ E+ +P ++ V+  N    F+  P S  ++ YP+      V  +Y
Sbjct: 158 KDKILEKTIPVHLEVSFKNFTICFL-WPPSFFELYYPIKNDFAKVTRYY 205


>gi|167463872|ref|ZP_02328961.1| RpsD [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 82

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
           + VNG+ V+I SY+   GDVI ++++S+ L S+ EA +     +P Y+  N   +   F+
Sbjct: 1   MTVNGKKVDIASYQVSVGDVIGLRERSRNLKSIKEALE-NRNFLPAYLEFNEQALEGKFI 59

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+P   +       +    +VEFYSR
Sbjct: 60  RLPERSE---LAQEIDEKQIVEFYSR 82


>gi|186920132|ref|YP_001874786.1| ribosomal protein S4 [Hemiselmis andersenii]
 gi|186461078|gb|ACC78240.1| ribosomal protein S4 [Hemiselmis andersenii]
          Length = 275

 Score = 78.4 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 14/164 (8%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPK------SPVNTRS----YGPGLHGQRRKSKPSYFGL 50
           M+KR +SK K+ +    N+ G  K        +  RS        +  +++ ++ S FG 
Sbjct: 1   MTKRLNSKFKVCK----NIKGNRKNLWAVVRAITFRSIRILKPDSISVKQKLNRISSFGK 56

Query: 51  QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
            L  KQ + K+Y +ISEK F+S+ ++A++S+  T   LIS LESRLD ++YR+ FV ++ 
Sbjct: 57  YLNGKQNLIKFYCNISEKLFQSLLQQAEKSKPKTIDKLISLLESRLDVVLYRSGFVNSLH 116

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            ARQ +NH  + +N ++V   +   K GD++E+K+       + 
Sbjct: 117 MARQLINHGFICINSKTVYNLNITLKSGDIVEIKRDFPIKELIT 160


>gi|7707685|dbj|BAA95356.1| ribosomal protein S4 [Clostridium perfringens]
          Length = 80

 Score = 78.0 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
           VNG+ V+I S++    DVI V +KS+        ++   + +P+++  N +N     V  
Sbjct: 1   VNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENP-KALPKWLEANVENFEGKVVAE 59

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
           P+  +D+  PV     L+VE YS+
Sbjct: 60  PAR-EDIDVPV--NETLIVELYSK 80


>gi|301500949|ref|YP_003795414.1| ribosomal protein S4 [Alveolata sp. CCMP3155]
 gi|300069495|gb|ADJ66602.1| ribosomal protein S4 [Chromerida sp. RM11]
          Length = 207

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 19/167 (11%)

Query: 51  QLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
           +L  KQ+++ ++  +++ + +    E  +  G +   L+  L  RLD+ +++  F  +I 
Sbjct: 42  RLIEKQRLRYHHS-LTQSQVKRYVAETRKYPGPSGLALLCELAMRLDSFLFQVGFAVSIR 100

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV---------------LE 155
           ++RQ + H HV VNGR V++  YRCK+GD+I +  + +    V                 
Sbjct: 101 SSRQLIRHGHVFVNGRVVSLPGYRCKQGDLICIAPRVESRRLVSRHVLATRTKRAANTFN 160

Query: 156 ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
            S  A   V EY  V   N+    +R     + +   + + P LV+E
Sbjct: 161 KSFSALTPVSEYAKVCPRNLKILVLRNIKPRELL---LKVDPMLVLE 204


>gi|326565700|gb|EGE15863.1| 30S ribosomal protein S4 [Moraxella catarrhalis 12P80B1]
          Length = 65

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 140 VIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
           +I V +KSK    +  A +LA +R +P ++ V+H  +   F   P   +    P  +  N
Sbjct: 1   MIAVHEKSKDQLRIKNAVELATQRGIPAWLEVDHSKLQGAFKSAPERSE---LPAEINEN 57

Query: 199 LVVEFYSR 206
           L+VE YS+
Sbjct: 58  LIVELYSK 65


>gi|150406488|ref|YP_001315127.1| ribosomal protein S4 [Chlorokybus atmophyticus]
 gi|126507725|gb|ABO15122.1| ribosomal protein S4 [Chlorokybus atmophyticus]
          Length = 267

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 65/255 (25%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYG-PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
           K K  RRI + +W   K  +   +         R   K S +  +L A+QK+   YG++ 
Sbjct: 8   KFKTCRRIQKKIWDSRKLTLKQENILLKAQVSPRGFEKQSNYSKELIARQKLSAIYGNLK 67

Query: 67  EKKFRSIFKEADRSRGDT-SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
              F  +FK+  R+R        +S LE RLD ++ R K+  T+  ARQ ++H+ +LVN 
Sbjct: 68  RDTFIKLFKKGRRARQVKLPDTFLSLLERRLDVVLLRLKYCSTLSEARQLISHKKILVNN 127

Query: 126 RSVNIGSYRCKEGD---------------------------------------------- 139
            +VNI SY  K GD                                              
Sbjct: 128 ETVNISSYLLKNGDLISIPRQELDNIKEKIFKNWTPAIGNYHGSMVGNTEFAQTSNKKKI 187

Query: 140 ----VIEVKQKSKQLASVLEASQLAERD----------VPEYISVNHDNMVATFVRIPSS 185
                   +   K         +   R            P ++ +N+  ++A F+  P  
Sbjct: 188 TVKLETRSRGFQKTTHLFNNIIKGGNRKNLKPDRRYLQRPTHLEINYKTLMAVFIHSPHQ 247

Query: 186 LKDVPYPVIMQPNLV 200
              + +P+ +  +L+
Sbjct: 248 ---IRWPIDINRDLI 259


>gi|50261300|ref|YP_052908.1| ribosomal protein S4 [Saprolegnia ferax]
 gi|48237613|gb|AAT40662.1| ribosomal protein S4 [Saprolegnia ferax]
          Length = 266

 Score = 75.7 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK--EADRSRGDTSHNLISFLESRL 96
           +R + K   +  +L AKQ+ K +YG I E + +++F   +   +  +  H  I  LESRL
Sbjct: 86  KRPEKKQKLYKERLFAKQQFKNFYGCIPEYQLKNLFNYLKNRNNNNNIIHKFIIVLESRL 145

Query: 97  DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS--------- 147
           D I++R+K   TIF A+Q +NH  + VN + +   +Y  K GD+I +             
Sbjct: 146 DMIIFRSKIAKTIFEAKQIINHGKIKVNNKIITSSNYILKRGDIITLNNFKILKKFYYLK 205

Query: 148 --KQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
             K      E  +   ++   YI  N+   +  F+R P   K++ YP  +   LV EF
Sbjct: 206 KKKNFQKSYELIKTVRKNKVNYIQFNNKYNICIFLRQPL-FKEIKYPFDLDLKLVDEF 262


>gi|114329658|ref|YP_740477.1| ribosomal protein S4 [Citrus sinensis]
 gi|113952624|gb|ABI49022.1| ribosomal protein S4 [Citrus sinensis]
          Length = 116

 Score = 75.3 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKQKLRF 56

Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNLISFLES 94
          +YG ++E++  ++F   ++ +G       ++L+ 
Sbjct: 57 HYG-LTERQLLNMFVSPEKPKGQPVWFYYNYLKC 89


>gi|10802791|gb|AAG23617.1|AF244668_1 ribosomal protein S4 [Carboxydothermus hydrogenoformans]
          Length = 155

 Score = 75.0 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 3   KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           +      KI  R G NL+ +          +  R+ GP   G  R   P+ +  + R K 
Sbjct: 7   RYTVPSXKICSREGXNLFSKXDRXDTDXXSMARRNKGPXQXGXTRPM-PTEYAPRXRXKL 65

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDT--IVYRAKFVPTIFAARQ 114
           K K  YG + E +F++    A+R  G T  N +  LE R D      R     +   ARQ
Sbjct: 66  KAKXIYG-VZEVQFQTXXVMAERXXGTTGENXVVLLERRSDKHGRSDRTTL-MSRALARQ 123

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            V      +N R VNI SY  K G+VI  K+
Sbjct: 124 VVRLNLTPLNXRQVNILSYVVKXGEVIIPKE 154


>gi|84508517|ref|YP_448680.1| ribosomal protein S4 [Dictyota dichotoma]
 gi|45925685|gb|AAS79066.1| ribosomal protein S4 [Dictyota dichotoma]
          Length = 237

 Score = 74.2 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 21/206 (10%)

Query: 9   HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQK------MKKYY 62
            K DR +G  L  R +           L G   +    Y   +   K        ++++Y
Sbjct: 31  VKWDRILGV-LSSRKRRRYQKLCKNYNLVGPTSRPNQPYKYPRWYFKNSLSNGVCVRRFY 89

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           GD+  +  +S+      ++  T  + +  LESRL   +YR  F  ++F ++Q + H  VL
Sbjct: 90  GDLRFEMLKSMC-----NKAKTVDSFMKCLESRLGINLYRLGFFSSVFESKQAILHGKVL 144

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ---------LASVLEASQLAERDVPEYISVNHD 173
           VNG  +    Y  K GD+IE   K +            ++  + +L     P +I  ++ 
Sbjct: 145 VNGVKITFDHYILKPGDLIEFCPKFRSKLKSRMITRRKNINYSDRLKLNPTPFWIQTDYS 204

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNL 199
           N+    +   ++    P+ +     L
Sbjct: 205 NLSFIILCETNNAVFYPFRIDFDEVL 230


>gi|166092864|gb|ABY82387.1| ribosomal protein S4 [Lychnis flos-cuculi]
          Length = 83

 Score = 73.8 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHNL 88
          +YG I+E++     + A +++G T   L
Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQVL 83


>gi|118577552|gb|ABL07142.1| small ribosomal protein 4 [Peperomia rhomboidea]
          Length = 101

 Score = 73.8 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
                   L  Q    K S + + L    K+   YG + E++     +   +++G     
Sbjct: 4   KRXVXXSSLKSQXXSXKRSQYRIXLEEXXKLXFXYG-LGERQLLRYVRIXGKAKGSXGQV 62

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           L+  LE RLD I++R     TI  ARQ VNHRH+LVNG 
Sbjct: 63  LLQILEMRLDNILFRLGMASTIPGARQLVNHRHILVNGH 101


>gi|197131012|gb|ACH47057.1| ribosomal protein S4 [Isoetes engelmannii]
 gi|205277648|gb|ACI02097.1| ribosomal protein S4 [Isoetes engelmannii]
          Length = 254

 Score = 73.4 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 8/157 (5%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K  RRI EN+W   K     +     L  +R++ K SYF +QLR  Q++  +YG
Sbjct: 15  YHLPRFKTCRRIEENVWVWQKLTEKQKHIISEL--RRKREKQSYFSVQLRTIQRLSLFYG 72

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
               +      K    +  +   +L+ +LE RLD I+    F  TI  ARQ ++H+ + V
Sbjct: 73  KSLPR------KAKKHTYLNKRKSLLYYLEKRLDVILVCTHFCSTICGARQLISHKKICV 126

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           N  +VN   +R   GD+I + +++  L  + E  +  
Sbjct: 127 NSETVNTHGFRVSNGDLISIVEENFFLFDIREKMKTN 163


>gi|209916097|gb|ACI95892.1| ribosomal protein S4 [Isoetes engelmannii]
 gi|241912117|gb|ACS71780.1| ribosomal protein S4 [Isoetes engelmannii]
          Length = 254

 Score = 73.4 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            + K  RRI EN+W   K     +     L  +R++ K SYF +QLR  Q++  +YG   
Sbjct: 18  PRFKTCRRIEENVWVWQKLTEKQKHIISEL--RRKREKQSYFSVQLRTIQRLSLFYGKSL 75

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
            +      K    +  +   +L+ +LE RLD I+    F  TI  ARQ ++H+ + VN  
Sbjct: 76  PR------KAKKHTYLNKRKSLLYYLEKRLDVILVCTHFCSTICGARQLISHKKICVNSE 129

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +VN   +R   GD+I + +++  L  + E  +  
Sbjct: 130 TVNTHGFRVSNGDLISIVEENFFLFDIREKMKTN 163


>gi|226348837|gb|ACO50741.1| ribosomal protein S4 [Micromonas pusilla CCMP1545]
          Length = 261

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 19/171 (11%)

Query: 8   KHKIDRRIGENLWGRPK-------------SPVNTRSYGPGLHGQRRKSKPSYFGLQLRA 54
           K+K  R++   +W   K                  +   P +   R    P+++G+ L  
Sbjct: 6   KYKTLRQLRIPVWPWRKLNPKHTAWMAKEVRRAKKKVTKPLV--PRPPKTPTFYGMTLLR 63

Query: 55  KQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
             K    YG  +   F ++F +A ++   +    +  LE RLD I+YRA+F  +     Q
Sbjct: 64  ILKT--VYGPSNTSTFVNLFSKAKKTSVPSLQAFLQLLEMRLDVILYRARFATSYLQLHQ 121

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVP 165
           ++ H  V VNG+ V         GDV+ +  ++    SV E+ +      P
Sbjct: 122 WIAHGKVCVNGQVVTTKGRLLSPGDVVSIHPQAVS--SVEESMRTFWAHAP 170


>gi|314908364|gb|ADT62129.1| ribosomal protein S4 [Isoetes engelmannii]
          Length = 254

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 8/157 (5%)

Query: 4   RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
               + K  RRI EN+W   K     +     L  +R++ K SYF +QLR  Q++  +YG
Sbjct: 15  YHLPRFKTCRRIEENVWVWQKLTEKQKHIISEL--RRKREKQSYFSVQLRTIQRLSLFYG 72

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
               +      K    +  +   +L+ +LE RLD I+    F  TI  ARQ ++H+ + V
Sbjct: 73  KSLPR------KAKKHTYLNKRKSLLYYLEKRLDVILVCTHFCSTICGARQLISHKKICV 126

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160
           N  +VN   +R   GD+I + +++  L  + E  +  
Sbjct: 127 NFETVNTHGFRVSNGDLISIVEENFFLFDIREKMKTN 163


>gi|12330478|gb|AAG52776.1| ribosomal protein 4 [Pleurophascum occidentale]
          Length = 96

 Score = 72.7 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI 73
           R+G       K+P    +    ++      K S + ++L  KQK++ +YG I+E++  + 
Sbjct: 1   RLGALPGLTNKTPQLXTNS---INQSISNKKISQYRIRLEXKQKLRFHYG-ITERQLLNY 56

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            + A +++G T   L+  LE RLD +++R    PTI  A 
Sbjct: 57  VRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGAS 96


>gi|166092887|gb|ABY82402.1| ribosomal protein S4 [Atocion rupestre]
          Length = 82

 Score = 72.7 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRAQSRSGKRSQYRIRLEEKQKLRF 56

Query: 61 YYGDISEKKFRSIFKEADRSRGDTSHN 87
          +YG I+E++     + A +++G T   
Sbjct: 57 HYG-ITERQLLKYVRIARKAKGSTGQV 82


>gi|233162|gb|AAB19387.1| ribosomal protein S4 [Bacillus subtilis]
          Length = 57

 Score = 71.9 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
          M++      K+ RR+G +L G  K  +  R Y PG HG  ++ K S +GLQL+ KQK+
Sbjct: 1  MARYTGPSWKLSRRLGISLSGTGKE-LEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKL 57


>gi|22550361|ref|NP_689354.1| ribosomal protein S4 [Chaetosphaeridium globosum]
 gi|22417027|gb|AAM96626.1|AF494279_31 ribosomal protein S4 [Chaetosphaeridium globosum]
          Length = 176

 Score = 71.9 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 23/179 (12%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISE 67
           K KI R+IGEN+W   K     +     +   RR S  S F  + +  +K++ +YG    
Sbjct: 2   KFKISRQIGENIWQTKKLTTRQKRILLKI---RRPSAKSNFFQRFQTFRKLRIFYGT--- 55

Query: 68  KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                                +  +E RLD I+ R  F   +  ARQ++NH  + VN   
Sbjct: 56  ----------------KPKQSLLNMEKRLDVILVRMNFCSNLSTARQWINHGFIKVNFSK 99

Query: 128 VNIGSYRCKEGDVIEVKQKSKQL-ASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
           V I S     GD++ V +         ++  ++ ++    ++ VN+   +   +  P S
Sbjct: 100 VTIPSMLLTNGDIVSVCKNFIPFVKKNMQKIRVFKKHKLSHLEVNYKLCIGILLFEPQS 158


>gi|84508556|ref|YP_448603.1| ribosomal protein S4 [Fucus vesiculosus]
 gi|39653279|gb|AAR29298.1| ribosomal protein S4 [Fucus vesiculosus]
          Length = 271

 Score = 71.9 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 28/187 (14%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     +   L     ++++YGD+  KKF+   K   +S+G +   LI  LE RLD
Sbjct: 80  NQTFKYNKWGYRNTLSILFCIRRFYGDLGHKKFKKSCKLLSKSKGSS-QKLIGNLEKRLD 138

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
             +YR  F  +I  +RQ + H  ++VNG+ +N G++  ++GD +E     +   ++  + 
Sbjct: 139 VTLYRLGFFHSILYSRQAILHNKIIVNGKFINNGNFMLRKGDFVEFCPTQR--INIQASL 196

Query: 158 -------------------------QLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYP 192
                                     L  +  P +I  ++ N+              P+ 
Sbjct: 197 LSRYKHFRSFRMRMERWRLSYRFKYDLHLQPTPAWIQTDYSNLSFILTSDVEIPVVYPFR 256

Query: 193 VIMQPNL 199
             M   L
Sbjct: 257 ANMDEAL 263


>gi|20451757|emb|CAD30547.1| ribosomal protein S4 [Listonella anguillarum]
          Length = 63

 Score = 71.5 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 143 VKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVV 201
           +++K+K+ + +  A ++AE R+ P +I V+   M  TF R+P           +   L+V
Sbjct: 2   IREKAKKQSRIKAALEVAEQREKPTWIEVDGGQMEGTFKRMPERSD---LSADINEQLIV 58

Query: 202 EFYSR 206
           E YS+
Sbjct: 59  ELYSK 63


>gi|253807610|gb|ACT36188.1| ribosomal protein S4 [Helicosporidium sp. ex Simulium jonesi]
          Length = 342

 Score = 71.5 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 63/111 (56%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           + + F  +L   QK+K +YG+IS K+  ++ ++A    G    N  S +ESRLD I+YR+
Sbjct: 46  ENNEFKNKLDCLQKLKIFYGNISTKQLLTLIRKAQNLPGFFDKNFFSLIESRLDVILYRS 105

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            F  +I+ ARQ   H+ +L+N + + + S   K GDV+ V + S  + +  
Sbjct: 106 NFAKSIYHARQLCYHKKILLNSKFITVPSTLLKPGDVLVVHENSIPINTNK 156


>gi|33322067|gb|AAQ06752.1|AF496096_1 30s ribosomal protein S4 [Lactobacillus delbrueckii subsp. lactis]
          Length = 81

 Score = 71.1 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 31  SYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG-DTSHNLI 89
           SY PG HG   + + S +G+QL  KQK++  +G +SE++FR++F  A + R      N +
Sbjct: 1   SYVPGQHGPNHRGRLSEYGMQLHEKQKLRWMFG-LSERQFRTLFVRAGKIREGQHGINFM 59

Query: 90  SFLESRLDTIVYRAKFVPTIFA 111
             LE RLD +VYR     T   
Sbjct: 60  ILLERRLDNVVYRLGLATTREQ 81


>gi|11496535|ref|NP_044545.1| ribosomal protein S4 [Toxoplasma gondii RH]
 gi|74828576|sp|Q9XQQ7|RR4_TOXGO RecName: Full=Apicoplast 30S ribosomal protein S4
 gi|5231238|gb|AAD41132.1|U87145_1 ribosomal protein S4 [Toxoplasma gondii]
          Length = 198

 Score = 71.1 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           +K K S F +QL  KQK+K  Y  + E + +  FK     +     NLI  +E RLD  +
Sbjct: 36  KKGKTSSFRIQLLEKQKLKYNY-RLKENQIKKYFKYI---KLLKIFNLIQIIELRLDATI 91

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
           +R  F  +I  ARQ + H  + +N   V   S+   E D+I +  K   +  +
Sbjct: 92  FRLGFAKSINQARQLITHGFIFINSILVKKPSFILTEKDLIYINPKKFTIILI 144


>gi|42905|emb|CAA23645.1| unnamed protein product [Escherichia coli]
 gi|147714|gb|AAA24576.1| ribosomal protein S4 [Escherichia coli]
          Length = 60

 Score = 71.1 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 145 QKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
           +K+K+ + V  A +LAE R+ P ++ V+   M  TF R P           +  +L+VE 
Sbjct: 1   EKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKRKPERSD---LSADINEHLIVEL 57

Query: 204 YSR 206
           YS+
Sbjct: 58  YSK 60


>gi|31442364|ref|NP_852621.1| ribosomal protein S4 [Eimeria tenella strain Penn State]
 gi|74810536|sp|Q7YN81|RR4_EIMTE RecName: Full=Apicoplast 30S ribosomal protein S4
 gi|31322456|gb|AAO40222.1| ribosomal protein S4 [Eimeria tenella]
          Length = 200

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 6/147 (4%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
           M +    K K  +R+        +   +T+ +    +    K   S++ L+L  KQK+K 
Sbjct: 1   MLRYLGPKLKKLKRLNI----HMQPEFSTKYFILNTNKYNNKMILSFYLLELFEKQKLKF 56

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRH 120
            +  +SEK  +       +       NLI+ +E RLD  ++   +  TI  A+Q + H +
Sbjct: 57  TFS-LSEKIIKKYILFMHK-YNYKKFNLINIIEIRLDNTIFNLGYSITIAQAKQLIIHGY 114

Query: 121 VLVNGRSVNIGSYRCKEGDVIEVKQKS 147
             VN + + I S+  K+GD+I +  KS
Sbjct: 115 FFVNFKLIKIPSFLLKKGDIITLSPKS 141


>gi|226323041|ref|ZP_03798559.1| hypothetical protein COPCOM_00813 [Coprococcus comes ATCC 27758]
 gi|225208608|gb|EEG90962.1| hypothetical protein COPCOM_00813 [Coprococcus comes ATCC 27758]
          Length = 90

 Score = 70.3 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/75 (49%), Positives = 46/75 (61%)

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
             G T  NL+  LESRLD +V+R  F  T   ARQ V+H+ VLVNG+ VNI SY  K GD
Sbjct: 1   MSGMTGENLMVLLESRLDNVVFRLGFARTRREARQIVDHKQVLVNGKQVNIPSYLIKAGD 60

Query: 140 VIEVKQKSKQLASVL 154
           VIE+K+  K    + 
Sbjct: 61  VIEIKEGKKIFTEIQ 75


>gi|299830443|ref|YP_003734814.1| ribosomal protein S4 [Pythium ultimum]
 gi|299830496|ref|YP_003734867.1| ribosomal protein S4 [Pythium ultimum]
 gi|269810820|gb|ACZ43849.1| ribosomal protein S4 [Pythium ultimum]
 gi|269810873|gb|ACZ43902.1| ribosomal protein S4 [Pythium ultimum]
 gi|269812133|gb|ACZ44431.1| ribosomal protein S4 [Pythium ultimum]
 gi|269812186|gb|ACZ44484.1| ribosomal protein S4 [Pythium ultimum]
          Length = 153

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 10/152 (6%)

Query: 1   MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY-------FGLQLR 53
           M+K    ++KI  +  EN+    K     +        + +  K          F  +L 
Sbjct: 1   MNKFR-PRNKICFQNNENIHANLKISKLNKKKWNLFKKRLKYKKEIKPEKRNRFFQKRLF 59

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRS--RGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
            KQ+ K +YG I E + +++F   ++   + +T  N I  LESRLD  + R K   T+F 
Sbjct: 60  EKQQFKNFYGCIPEYQLKNLFSNLNKKDNKINTFKNFILLLESRLDINIVRLKLAKTVFQ 119

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           ++Q +NH+ V +N + V+  ++  K+GDVI +
Sbjct: 120 SKQLINHKKVKINDKIVSKPNFLLKKGDVISI 151


>gi|167946611|ref|ZP_02533685.1| 30S ribosomal protein S4 [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 103

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 139 DVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQP 197
             + +++K+K+   +  A  LAE+    +++ V+   M   F R+P        P  +  
Sbjct: 38  TRVSIREKAKKQVRIQGALSLAEQYGFVDWVEVDPKAMKGVFKRVPDRAD---LPAEINE 94

Query: 198 NLVVEFYSR 206
            LVVE YS+
Sbjct: 95  QLVVELYSK 103


>gi|21449991|ref|NP_659253.1| ribosomal protein S4 [Laminaria digitata]
 gi|21425316|emb|CAC87949.1| ribosomal protein S4 [Laminaria digitata]
          Length = 265

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 24/185 (12%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     +   L     ++++YGD+S K F+   +     + +    LI  LE RLD
Sbjct: 74  NQTFKYNRISYRNTLSILLSIRRFYGDLSHKAFKRFCQPLVSLK-NPPQKLIGALEGRLD 132

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-------- 149
             +YR  F  +I+ +RQ + H  VLVNG+ +  G +  ++GD +E     +         
Sbjct: 133 ISLYRLGFFHSIYYSRQSIFHNKVLVNGKKIGHGGFILQKGDYVEFCPSQRSAIRARLVA 192

Query: 150 ---------------LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
                            S     +L     P+++  ++ N+         +    P+ V 
Sbjct: 193 RYKRFRSSHVKLERWRLSNRFKFELHLHPTPKWVQTDYSNLSFILSSDVCAPVMYPFRVD 252

Query: 195 MQPNL 199
           +   L
Sbjct: 253 VDEAL 257


>gi|268053689|ref|YP_003289096.1| ribosomal protein S4 [Saccharina longipedalis]
 gi|262318309|dbj|BAI48630.1| ribosomal protein S4 [Saccharina longipedalis]
          Length = 265

 Score = 69.2 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 24/185 (12%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     F   L     ++++YGD+S K F+++ K     + + S  LI  LE RLD
Sbjct: 74  NQTFKYNRISFRNTLSILLCIRRFYGDLSHKAFKNLCKPLVALK-NPSQKLIGSLEGRLD 132

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-------- 149
             +YR  F  +I+++RQ + H  VLVNG+ +  G +  ++GD +E     +Q        
Sbjct: 133 ISLYRLGFFHSIYSSRQAILHSKVLVNGKKIGHGGFTLQKGDFVEFCPSHRQAIRARLVA 192

Query: 150 ---------------LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
                            S     +L  +  P++I  ++ N+         +    P+ V 
Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSADVCAPVMYPFRVD 252

Query: 195 MQPNL 199
           +   L
Sbjct: 253 VDEAL 257


>gi|268053533|ref|YP_003288892.1| ribosomal protein S4 [Saccharina japonica]
 gi|268053572|ref|YP_003288930.1| ribosomal protein S4 [Saccharina religiosa]
 gi|268053611|ref|YP_003288968.1| ribosomal protein S4 [Saccharina ochotensis]
 gi|268053650|ref|YP_003289045.1| ribosomal protein S4 [Saccharina diabolica]
 gi|262318153|dbj|BAI48478.1| ribosomal protein S4 [Saccharina japonica]
 gi|262318192|dbj|BAI48516.1| ribosomal protein S4 [Saccharina religiosa]
 gi|262318231|dbj|BAI48554.1| ribosomal protein S4 [Saccharina ochotensis]
 gi|262318270|dbj|BAI48592.1| ribosomal protein S4 [Saccharina diabolica]
          Length = 265

 Score = 68.8 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 24/185 (12%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     F   L     ++++YGD+S K F+++ K     + + S  LI  LE RLD
Sbjct: 74  NQTFKYNRISFRNTLSILLCIRRFYGDLSHKAFKNLCKPLVALK-NPSQKLIGSLEGRLD 132

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ-------- 149
             +YR  F  +I+ +RQ + H  VLVNG+ +  G +  ++GD +E     +Q        
Sbjct: 133 ISLYRLGFFHSIYYSRQAILHSKVLVNGKKIGHGGFTLQKGDFVEFCPSHRQAIRARLVA 192

Query: 150 ---------------LASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
                            S     +L  +  P++I  ++ N+         +    P+ V 
Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSADVCAPVMYPFRVD 252

Query: 195 MQPNL 199
           +   L
Sbjct: 253 VDEAL 257


>gi|294663004|ref|YP_003579825.1| ribosomal protein S4 [Dictyostelium citrinum]
 gi|162416159|sp|P0C5Y3|RT04_DICCI RecName: Full=Ribosomal protein S4, mitochondrial
 gi|187479911|gb|ACD12712.1| ribosomal protein S4 [Dictyostelium citrinum]
          Length = 325

 Score = 68.8 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 5/117 (4%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L   +  +K+Y ++  K+F+ ++K+   +       +I  LE R+D I+ R+ FV +I+ 
Sbjct: 108 LILYRLFRKFYINLKLKQFKRLYKKYKGNEKI----IIQQLEKRIDMILLRSGFVRSIYE 163

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEY 167
           ARQ +NH+H+LVNG    I SY    GD+I +K+ S +   +    + L  + VPE+
Sbjct: 164 ARQLINHKHILVNGNIARIPSYTLNVGDIISIKEGSHKQNLIHRLKKILLPKVVPEH 220


>gi|145932374|ref|YP_001165423.1| ribosomal protein S4 [Phytophthora sojae]
 gi|110169617|gb|ABG54083.1| ribosomal protein S4 [Phytophthora sojae]
          Length = 153

 Score = 68.8 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS--RGDTSHNLISFLESRLDTIVY 101
           +  +F  +L  KQ+ + +YG I E + +++FK+  +   + +     +  LESRLD  + 
Sbjct: 50  RKKFFQKRLFEKQQFRNFYGCIHEYQLKNLFKKLSKKDNKINIFKKFVILLESRLDINLV 109

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           R K V TIF A+Q +NH+ + VN + +N  ++  ++GD+I +
Sbjct: 110 RLKLVKTIFQAKQLINHKKIKVNNKIINKPNFLLQKGDIIYI 151


>gi|406283|emb|CAA81389.1| ribosomal protein RpsD [Bordetella pertussis Tohama I]
          Length = 72

 Score = 68.4 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPY 191
              K GDVI +++K+K+   + E+  LA    +P+++ V+   M  TF   P        
Sbjct: 1   MLVKAGDVISIREKAKKQGRIRESLDLAASIGLPQWVEVDASKMTGTFKSAPDRAD---V 57

Query: 192 PVIMQPNLVVEFYSR 206
              +  ++VVE YSR
Sbjct: 58  ARDVNESMVVELYSR 72


>gi|268164038|ref|YP_003288803.1| ribosomal protein S4 [Saccharina angustata]
 gi|262318348|dbj|BAI48668.1| ribosomal protein S4 [Saccharina angustata]
          Length = 265

 Score = 68.4 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 24/185 (12%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     +   L     ++++YGD+S K F+++ K     + +    LI  LE RLD
Sbjct: 74  NQTFKYNRISYRNTLSILLCVRRFYGDLSHKAFKNLCKPLVALK-NPPQKLIGSLEGRLD 132

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ------------ 145
             +YR  F  +I+ +RQ + H  VLVNG+ +  G +  ++GD +E               
Sbjct: 133 ISLYRLGFFHSIYYSRQAILHSKVLVNGKKIGHGGFILQKGDFVEFCPSHRPAIRARLVA 192

Query: 146 ---KSKQLASVLEASQLAER--------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
              + +     LE  +L+ R          P+++  ++ N+         +    P+ + 
Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWVQTDYSNLSFILSSDVCAPVMYPFRID 252

Query: 195 MQPNL 199
           +   L
Sbjct: 253 VDEAL 257


>gi|309798829|ref|ZP_07693092.1| ribosomal protein S4 [Streptococcus infantis SK1302]
 gi|308117555|gb|EFO54968.1| ribosomal protein S4 [Streptococcus infantis SK1302]
          Length = 64

 Score = 68.4 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+      K  RR+G +L G  K  +  R+Y PG HG   +SK S +GLQL  KQK   
Sbjct: 1  MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKTSL 59

Query: 61 Y 61
          +
Sbjct: 60 H 60


>gi|268164077|ref|YP_003288854.1| ribosomal protein S4 [Saccharina coriacea]
 gi|262318387|dbj|BAI48706.1| ribosomal protein S4 [Saccharina coriacea]
          Length = 265

 Score = 68.0 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 24/185 (12%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     +   L     ++++YGD+S K F+++ K     + + S  LI  LE RLD
Sbjct: 74  NQTFKYNRISYRNTLSILLCIRRFYGDLSHKAFKNLCKPLVALK-NPSQKLIGSLEGRLD 132

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ------------ 145
             +YR  F  +I+ +RQ + H  VLVNG+ +  G +  ++GD +E               
Sbjct: 133 ISLYRLGFFHSIYYSRQAILHSKVLVNGKKIGHGGFTLQKGDFVEFCPSHRPAIRARLVA 192

Query: 146 ---KSKQLASVLEASQLAER--------DVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
              + +     LE  +L+ R          P++I  ++ N+         +    P+ V 
Sbjct: 193 RYKRFRSFHVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSSDVCAPVLYPFRVD 252

Query: 195 MQPNL 199
           +   L
Sbjct: 253 VDEAL 257


>gi|261279039|gb|ACX61703.1| ribosomal protein S4 [Orthotrichum rupestre]
          Length = 76

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVKIIRRLGVLPGLTNKTPQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADR 79
          +YG I+E++F +  + A +
Sbjct: 58 HYG-ITERQFFNYVRIARK 75


>gi|11497481|ref|NP_042271.1| ribosomal protein S4 [Prototheca wickerhamii]
 gi|1173305|sp|P46743|RT04_PROWI RecName: Full=Ribosomal protein S4, mitochondrial
 gi|467872|gb|AAD12659.1| ribosomal protein S4 [Prototheca wickerhamii]
          Length = 511

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 57/126 (45%)

Query: 37  HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRL 96
             +   SK   +   L   +K+K +YG I  K+   I  +A    G  S N  S +E RL
Sbjct: 145 RNKSAGSKSREYLEILLCVKKLKMFYGFIPLKQLHKILVQAKAMPGYFSKNFFSLIEKRL 204

Query: 97  DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156
           D ++YR+ F  TI AARQ   H  + VN +   I S   + GD+I  K +   L +    
Sbjct: 205 DVVLYRSGFTKTIVAARQACRHSQIYVNSKVCRIPSTILESGDIISYKNQLDSLKTAEIK 264

Query: 157 SQLAER 162
           + L   
Sbjct: 265 NNLFSN 270


>gi|9695411|ref|NP_037633.1| ribosomal protein S4 [Phytophthora infestans]
 gi|6692663|gb|AAF24806.1|U17009_39 ribosomal protein S4 [Phytophthora infestans]
 gi|58012169|gb|AAW62577.1| ribosomal protein S4 [Phytophthora infestans]
 gi|58202008|gb|AAW67063.1| ribosomal protein S4 [Phytophthora infestans]
 gi|58202055|gb|AAW67109.1| ribosomal protein S4 [Phytophthora infestans]
          Length = 153

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
            L    K     +         + + +  +F  +L  KQ+ + +YG I E + ++IF++ 
Sbjct: 24  LLKLNSKKWNLFKKKLRYRKEIKPEKRKKFFQKRLFEKQQFRNFYGCIHEYQLKNIFRKL 83

Query: 78  DRS--RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
            +   + +     I  LESRLD  + R K V TIF A+Q +NH+ + VN + ++  ++  
Sbjct: 84  SKKDNKINIFKKFIILLESRLDINLVRLKLVKTIFKAKQLINHKKIKVNNKIISKPNFIL 143

Query: 136 KEGDVIEV 143
           ++GD+I +
Sbjct: 144 QKGDIIHI 151


>gi|301500901|ref|YP_003795313.1| ribosomal protein S4 [Chromera velia]
 gi|300069447|gb|ADJ66555.1| ribosomal protein S4 [Chromera velia]
          Length = 2072

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 48   FGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVP 107
            F  +L+ KQK++ YY ++++ + ++  +  D  + +    L++ LE RLD+++YR  F P
Sbjct: 1893 FLHRLKLKQKIQFYY-NLTDHQLKNYLRRRDSVKANFKLKLLAKLELRLDSLIYRLGFAP 1951

Query: 108  TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEY 167
            +I AAR+ +  +H+LVN       +  C   D + V      L  +L+   L  +++ +Y
Sbjct: 1952 SILAARKLITQKHILVNNCMTYAPNLVCSIYDTVRVAPYRASLNHILKNIYL-NKELVKY 2010

Query: 168  I 168
            I
Sbjct: 2011 I 2011


>gi|54610897|gb|AAV35372.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           capense]
          Length = 85

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN---MVATF 179
           VN   V+I SYRCK  D+I V+ +     ++   S L E+ +P++++++           
Sbjct: 1   VNNHVVDIPSYRCKPKDIITVRNRPTSYNALKGESLLGEK-IPDHLTLSLSEGSRPTGLV 59

Query: 180 VRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            RI          + +   LVVE+YSR
Sbjct: 60  NRI---ASRESVNLNINELLVVEYYSR 83


>gi|261279049|gb|ACX61708.1| ribosomal protein S4 [Schistidium apocarpum]
          Length = 76

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + KI RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVKIIRRLGALPGLTNKTPQLKSSL---INQSTSSKKISPYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|268309094|gb|ACY95505.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309120|gb|ACY95518.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309122|gb|ACY95519.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309124|gb|ACY95520.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309130|gb|ACY95523.1| ribosomal protein S4 [Dicranum scoparium]
          Length = 79

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRSR 81
          +YG I+E++  +  + A +++
Sbjct: 58 HYG-ITERQLLNYVRIARKAK 77


>gi|312863507|ref|ZP_07723745.1| 30S ribosomal protein S4 domain protein [Streptococcus
          vestibularis F0396]
 gi|311101043|gb|EFQ59248.1| 30S ribosomal protein S4 domain protein [Streptococcus
          vestibularis F0396]
          Length = 64

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+      K  RR+G +L G+    +   +Y PG  G   +SK S +GLQL  KQK++ 
Sbjct: 1  MSRYTGPSWKQARRLGLSLTGK---ELARCNYVPGQQGPNNRSKLSEYGLQLAEKQKLRF 57

Query: 61 YYG 63
           YG
Sbjct: 58 SYG 60


>gi|268309132|gb|ACY95524.1| ribosomal protein S4 [Dicranum howellii]
          Length = 76

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + KI RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|268309118|gb|ACY95517.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309126|gb|ACY95521.1| ribosomal protein S4 [Dicranum scoparium]
          Length = 80

 Score = 66.1 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRSRGDT 84
          +YG I+E++  +  + A +++G  
Sbjct: 58 HYG-ITERQLLNYVRIARKAKGSK 80


>gi|15150718|ref|NP_150384.1| ribosomal protein S4 [Pylaiella littoralis]
 gi|15147724|emb|CAC50825.1| ribosomal protein S4 [Pylaiella littoralis]
          Length = 265

 Score = 66.1 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     +   L +   ++++YGD+S K F+S+ + + + + + S +L+  LE RLD
Sbjct: 74  NQVFKYNRIGYRNTLSSIFCLRRFYGDLSHKSFKSLCQPSFKLK-NPSLDLLGTLEGRLD 132

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             +YR  F  +I+ +RQ + H  ++VNG+ +    +  K+GD +E     + 
Sbjct: 133 ICLYRLGFFHSIYYSRQAIQHNKIIVNGKKMGHSGFVLKKGDYVEFCPTQRS 184


>gi|268309134|gb|ACY95525.1| ribosomal protein S4 [Dicranum majus]
          Length = 80

 Score = 66.1 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRSR 81
          +YG I+E++  +  + A +++
Sbjct: 58 HYG-ITERQLLNYIRIARKAK 77


>gi|56182564|gb|AAV84028.1| Rps4 [Lygodium microphyllum]
 gi|56182566|gb|AAV84029.1| Rps4 [Lygodium microphyllum]
 gi|56182568|gb|AAV84030.1| Rps4 [Lygodium microphyllum]
 gi|56182570|gb|AAV84031.1| Rps4 [Lygodium microphyllum]
 gi|56182572|gb|AAV84032.1| Rps4 [Lygodium microphyllum]
 gi|56182574|gb|AAV84033.1| Rps4 [Lygodium microphyllum]
 gi|56182576|gb|AAV84034.1| Rps4 [Lygodium microphyllum]
 gi|56182578|gb|AAV84035.1| Rps4 [Lygodium microphyllum]
 gi|56182580|gb|AAV84036.1| Rps4 [Lygodium microphyllum]
 gi|56182582|gb|AAV84037.1| Rps4 [Lygodium microphyllum]
 gi|56182584|gb|AAV84038.1| Rps4 [Lygodium microphyllum]
 gi|56182586|gb|AAV84039.1| Rps4 [Lygodium microphyllum]
 gi|56182588|gb|AAV84040.1| Rps4 [Lygodium microphyllum]
 gi|56182590|gb|AAV84041.1| Rps4 [Lygodium microphyllum]
 gi|56182592|gb|AAV84042.1| Rps4 [Lygodium microphyllum]
 gi|56182594|gb|AAV84043.1| Rps4 [Lygodium microphyllum]
 gi|56182596|gb|AAV84044.1| Rps4 [Lygodium microphyllum]
 gi|56182598|gb|AAV84045.1| Rps4 [Lygodium microphyllum]
 gi|56182600|gb|AAV84046.1| Rps4 [Lygodium microphyllum]
 gi|56182602|gb|AAV84047.1| Rps4 [Lygodium microphyllum]
 gi|56182604|gb|AAV84048.1| Rps4 [Lygodium microphyllum]
 gi|56182606|gb|AAV84049.1| Rps4 [Lygodium microphyllum]
 gi|56182608|gb|AAV84050.1| Rps4 [Lygodium microphyllum]
 gi|56182610|gb|AAV84051.1| Rps4 [Lygodium microphyllum]
 gi|56182612|gb|AAV84052.1| Rps4 [Lygodium microphyllum]
 gi|56182614|gb|AAV84053.1| Rps4 [Lygodium microphyllum]
 gi|56182616|gb|AAV84054.1| Rps4 [Lygodium microphyllum]
 gi|56182618|gb|AAV84055.1| Rps4 [Lygodium microphyllum]
 gi|56182620|gb|AAV84056.1| Rps4 [Lygodium microphyllum]
 gi|56182622|gb|AAV84057.1| Rps4 [Lygodium microphyllum]
 gi|56182624|gb|AAV84058.1| Rps4 [Lygodium microphyllum]
 gi|56182626|gb|AAV84059.1| Rps4 [Lygodium microphyllum]
 gi|56182628|gb|AAV84060.1| Rps4 [Lygodium microphyllum]
 gi|56182630|gb|AAV84061.1| Rps4 [Lygodium microphyllum]
 gi|56182632|gb|AAV84062.1| Rps4 [Lygodium microphyllum]
 gi|56182634|gb|AAV84063.1| Rps4 [Lygodium microphyllum]
 gi|56182636|gb|AAV84064.1| Rps4 [Lygodium microphyllum]
 gi|56182638|gb|AAV84065.1| Rps4 [Lygodium microphyllum]
 gi|56182640|gb|AAV84066.1| Rps4 [Lygodium microphyllum]
 gi|56182642|gb|AAV84067.1| Rps4 [Lygodium microphyllum]
 gi|56182644|gb|AAV84068.1| Rps4 [Lygodium microphyllum]
 gi|56182646|gb|AAV84069.1| Rps4 [Lygodium microphyllum]
 gi|56609530|gb|AAW03316.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|56609532|gb|AAW03317.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|56609534|gb|AAW03318.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052701|gb|AAZ95196.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052703|gb|AAZ95197.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052705|gb|AAZ95198.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052707|gb|AAZ95199.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052709|gb|AAZ95200.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052711|gb|AAZ95201.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052713|gb|AAZ95202.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052715|gb|AAZ95203.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052717|gb|AAZ95204.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052719|gb|AAZ95205.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052721|gb|AAZ95206.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052723|gb|AAZ95207.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052725|gb|AAZ95208.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052727|gb|AAZ95209.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052729|gb|AAZ95210.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052731|gb|AAZ95211.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052733|gb|AAZ95212.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052735|gb|AAZ95213.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052737|gb|AAZ95214.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052739|gb|AAZ95215.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052741|gb|AAZ95216.1| ribosomal protein S4 [Lygodium microphyllum]
 gi|74052743|gb|AAZ95217.1| ribosomal protein S4 [Lygodium microphyllum]
          Length = 87

 Score = 65.7 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 10/89 (11%)

Query: 124 NGRSVNIGSYRCKEGDVIEVK---QKSKQLASVLEASQLAERDVPEYISV---NHDNMVA 177
           N   V+I SYRCK  D+I +K     S  L S+         ++P+++++     D    
Sbjct: 1   NNCIVDIPSYRCKPKDIIALKGLLTPSGTLKSI-GTESSKRNEIPDHLTLFPTEGDETKG 59

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   I +        + +   LVVE+YSR
Sbjct: 60  SVNGIVNR---ESIQLNINELLVVEYYSR 85


>gi|268309082|gb|ACY95499.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309096|gb|ACY95506.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309100|gb|ACY95508.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309128|gb|ACY95522.1| ribosomal protein S4 [Dicranum scoparium]
          Length = 77

 Score = 65.7 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRSR 81
          +YG I+E++  +  + A +++
Sbjct: 58 HYG-ITERQLLNYVRIARKAK 77


>gi|254585373|ref|XP_002498254.1| ZYRO0G05918p [Zygosaccharomyces rouxii]
 gi|238941148|emb|CAR29321.1| ZYRO0G05918p [Zygosaccharomyces rouxii]
          Length = 479

 Score = 65.7 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 7/156 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDI-SEKKFRSIFKE 76
           NL+ + +    +++         ++   +Y G  L  K+    +   + S  +  +  K 
Sbjct: 27  NLYKKGQVDFRSKTLYQ-QKWTAKQETRAYHGEHLTEKRWQFFFNPKLDSVAQLDASLKG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
                        + LE RLD  V+RA F  ++  ARQF+   +V VNG  +   +Y  K
Sbjct: 86  GKEEETPFLLQTFAVLEKRLDFAVFRAMFASSVRQARQFILQGNVFVNGIKIAHPNYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNH 172
            GDV  V+        VLEA    +  V E + V+ 
Sbjct: 146 PGDVFRVRPSK-----VLEALGAKKPSVQESLKVDK 176


>gi|56182648|gb|AAV84070.1| Rps4 [Lygodium microphyllum]
          Length = 87

 Score = 65.7 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 10/89 (11%)

Query: 124 NGRSVNIGSYRCKEGDVIEVK---QKSKQLASVLEASQLAERDVPEYISV---NHDNMVA 177
           N   V+I SYRCK  D+I +K     S  L S+          +P+++++     D    
Sbjct: 1   NNCIVDIPSYRCKPKDIIALKGLLTPSGTLKSI-GTESSKRNGIPDHLTLFPTEGDETKG 59

Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +   I +        + +   LVVE+YSR
Sbjct: 60  SVNGIVNR---ESIQLNINELLVVEYYSR 85


>gi|226329504|ref|ZP_03805022.1| hypothetical protein PROPEN_03413 [Proteus penneri ATCC 35198]
 gi|225202690|gb|EEG85044.1| hypothetical protein PROPEN_03413 [Proteus penneri ATCC 35198]
          Length = 68

 Score = 65.3 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPK-SPVNTRSY---GPGLHGQRRKSKPSYFGLQLRAKQ 56
          M++    K K+ RR G +L+ +     ++T+      PG HG  RK + S +G+QLR KQ
Sbjct: 1  MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKLEQAPGQHGA-RKPRLSDYGVQLREKQ 59

Query: 57 K 57
          K
Sbjct: 60 K 60


>gi|261279041|gb|ACX61704.1| ribosomal protein S4 [Polytrichum formosum]
          Length = 76

 Score = 65.3 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P     Y   ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGALPGLTNKTPQLKSGY---INQAVSNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|261279031|gb|ACX61699.1| ribosomal protein S4 [Brachythecium velutinum]
          Length = 76

 Score = 65.3 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|261278971|gb|ACX61669.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278973|gb|ACX61670.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278975|gb|ACX61671.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278977|gb|ACX61672.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278979|gb|ACX61673.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278981|gb|ACX61674.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278983|gb|ACX61675.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278985|gb|ACX61676.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278987|gb|ACX61677.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278989|gb|ACX61678.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278991|gb|ACX61679.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278993|gb|ACX61680.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278995|gb|ACX61681.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278997|gb|ACX61682.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261278999|gb|ACX61683.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279001|gb|ACX61684.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279003|gb|ACX61685.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279005|gb|ACX61686.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279007|gb|ACX61687.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279009|gb|ACX61688.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279011|gb|ACX61689.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279013|gb|ACX61690.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279015|gb|ACX61691.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279017|gb|ACX61692.1| ribosomal protein S4 [Dicranum bonjeanii]
 gi|261279021|gb|ACX61694.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279023|gb|ACX61695.1| ribosomal protein S4 [Dicranum scoparium]
 gi|261279025|gb|ACX61696.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309078|gb|ACY95497.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309080|gb|ACY95498.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309084|gb|ACY95500.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309086|gb|ACY95501.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309088|gb|ACY95502.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309090|gb|ACY95503.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309092|gb|ACY95504.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309098|gb|ACY95507.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309102|gb|ACY95509.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309104|gb|ACY95510.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309106|gb|ACY95511.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309110|gb|ACY95513.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309112|gb|ACY95514.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309114|gb|ACY95515.1| ribosomal protein S4 [Dicranum scoparium]
 gi|268309116|gb|ACY95516.1| ribosomal protein S4 [Dicranum scoparium]
          Length = 76

 Score = 64.9 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|261279033|gb|ACX61700.1| ribosomal protein S4 [Calliergonella cuspidata]
          Length = 76

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|261279047|gb|ACX61707.1| ribosomal protein S4 [Plagiomnium undulatum]
          Length = 76

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGALPGPTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|261279035|gb|ACX61701.1| ribosomal protein S4 [Hypnum cupressiforme]
          Length = 76

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P    S    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSSS---INQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
           YG I+E++  +  + A ++
Sbjct: 58 LYG-ITERQLLNYVRMARKA 76


>gi|283795041|ref|YP_003359457.1| ribosomal protein S4 [Synedra acus]
 gi|261279697|gb|ACX62005.1| ribosomal protein S4 [Synedra acus]
          Length = 246

 Score = 64.9 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 7/149 (4%)

Query: 39  QRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF-------KEADRSRGDTSHNLISF 91
           Q        +   L  KQK   YYG + +K ++          K   + +      L+S 
Sbjct: 69  QTSAFFHKKYKTILHNKQKTSFYYGGLKKKFWKKQINHVLTRKKSFFKLKSFKHLALLSL 128

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RLD ++YRA F P+I  ARQ +   HV +N   +   S R K  D + + + SK L 
Sbjct: 129 LERRLDVLLYRAHFAPSIKYARQLIQQGHVNLNNSVITESSVRLKNNDKVSLNKISKNLV 188

Query: 152 SVLEASQLAERDVPEYISVNHDNMVATFV 180
                +       P+Y+++N+      F 
Sbjct: 189 YDNLKNSTLWPLPPKYLAINYKTFEIIFT 217


>gi|187764107|ref|YP_001876556.1| ribosomal protein S4 [Dictyostelium fasciculatum]
 gi|160688815|gb|ABX45230.1| ribosomal protein S4 [Dictyostelium fasciculatum]
          Length = 276

 Score = 64.6 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
           K        +L   ++   YY +IS K+F+ +++   + +          LE RLD+++ 
Sbjct: 102 KKYERDSIQKLVFYKRFLHYYKNISIKQFKKLYRILKKKQQK-LQKFWEILEGRLDSVLV 160

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R++ V T++AAR F+ ++H+ VNG+     +Y  K GD I +++K  ++A+ ++  +L  
Sbjct: 161 RSQLVRTMYAARHFIKYKHISVNGKVKTRLNYLIKIGDFIGMRRKKMKVATKIKLFELVR 220

Query: 162 RDV-----PEYISVNHDNMVATFVRIPSSLK 187
           + +     P Y+  +   ++ T V  P   +
Sbjct: 221 KGLMIGIGPAYLETDFRLLLTTMVYKPKMSE 251


>gi|60117135|ref|YP_209598.1| ribosomal protein S4 [Polysphondylium pallidum]
 gi|51339699|gb|AAU00613.1| ribosomal protein S4 [Polysphondylium pallidum]
          Length = 268

 Score = 64.6 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 76/146 (52%), Gaps = 7/146 (4%)

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           +K + +Y ++  K+ ++I+K+  R + + S   +S +E RLD+I+ R+    T++AAR F
Sbjct: 108 RKFRFHYKNLKLKQIKNIYKQVTR-KQNKSKLFMSIIERRLDSILVRSSLFQTMYAARHF 166

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV-----PEYISV 170
           + + H+ VNGR +   +Y    GD++  K+   +L       +L  +       P Y+  
Sbjct: 167 IQYNHICVNGRIIKKLNYHVNIGDLVGFKKNKMRLKIKKILKRLIRKHKFISISPAYLET 226

Query: 171 NHDNMVATFVRIPSSLKDVPYPVIMQ 196
           ++  ++ T +  P   +++ Y   ++
Sbjct: 227 DYRLLLTTLIYTP-RKEEIKYLFTIK 251


>gi|261279029|gb|ACX61698.1| ribosomal protein S4 [Brachythecium rutabulum]
          Length = 76

 Score = 64.2 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + + L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKISQYRILLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|261279043|gb|ACX61705.1| ribosomal protein S4 [Phaeoceros carolinianus]
          Length = 76

 Score = 64.2 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + KI RR+G       K      S    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVKIIRRLGILPGLTNKISQLKSSS---VNQSTSNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|261279027|gb|ACX61697.1| ribosomal protein S4 [Rosulabryum capillare]
          Length = 76

 Score = 63.8 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P    +    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG I+E++  +  + A ++
Sbjct: 58 HYG-ITERQLLNYVRIARKA 76


>gi|157154437|gb|ABV24925.1| ribosomal protein small subunit 4 [Asplenium viride]
          Length = 84

 Score = 63.8 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFV 180
           N   V+I SYRCK  D+I V+ +     ++   S + ++  P++++V     D       
Sbjct: 1   NNCIVDIPSYRCKPKDLITVRNRPTSCNAMRNKSLVGDKT-PDHLTVSLSEGDRATGLVN 59

Query: 181 RIPSSLKDVPYPVIMQPNLVVEFYSR 206
           R+          + +   LVVE+YSR
Sbjct: 60  RV---ANRESIVLNINELLVVEYYSR 82


>gi|78102651|gb|ABB21539.1| small ribosomal protein 4 [Plagiochila ericicola]
          Length = 68

 Score = 63.4 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-DVPEYI 168
             ARQ VNHRH+ +N   V+I SY C+ GD+I +  K K  + V +     ++  +P ++
Sbjct: 1   PGARQLVNHRHISINNDIVDIPSYNCEPGDIITIGNKQKSQSIVTKNINSFQKLKIPSHL 60

Query: 169 SVNHDNMV 176
           + +   + 
Sbjct: 61  TFDSTQLR 68


>gi|261279019|gb|ACX61693.1| ribosomal protein S4 [Dicranum scoparium]
          Length = 74

 Score = 63.4 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEAD 78
          +YG I+E++  +  + A 
Sbjct: 58 HYG-ITERQLLNYVRIAR 74


>gi|261279045|gb|ACX61706.1| ribosomal protein S4 [Preissia quadrata]
          Length = 76

 Score = 63.4 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + KI RR+G       K     +S    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVKIIRRLGALPGLTNK---ILKSKSGSINQSTSNKKVSQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKFRSIFKEADRS 80
          +YG ++E++     + A ++
Sbjct: 58 HYG-LTERQLLKYVRIARKA 76


>gi|84508596|ref|YP_448642.1| ribosomal protein S4 [Desmarestia viridis]
 gi|45925628|gb|AAS79029.1| ribosomal protein S4 [Desmarestia viridis]
          Length = 269

 Score = 63.0 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 76/219 (34%), Gaps = 26/219 (11%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
           +R     +I  R+       P               Q  K     +   L     ++++Y
Sbjct: 45  RRRRPLTQI--RLQNRRPTHPLCHDYRFIKPRARANQTFKYNRWGYRNTLSILFCLRRFY 102

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           GD++ K F+ +      S    S  L+  LE RLD  +YR  F  +IF +RQ + H  VL
Sbjct: 103 GDLNHKAFKRLCHSVS-SSTTPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVL 161

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS-----------------------QL 159
           VNG  +  G +  ++GD +E     +        +                       +L
Sbjct: 162 VNGEKIGHGGFILQKGDYVEFCPTQRPAIRARLLARYKRYRSFRVRMERWRLSHRYKFEL 221

Query: 160 AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPN 198
             +  P +I  ++ N+         +    P+   +  +
Sbjct: 222 HLQPTPRWIQTDYSNLSFILSANVGAPIIFPFRADVDES 260


>gi|50292421|ref|XP_448643.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527955|emb|CAG61606.1| unnamed protein product [Candida glabrata]
          Length = 484

 Score = 63.0 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 7/158 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQL-RAKQKMKKYYGDISEKKFRSIFKE 76
           NL+ +      ++S         ++   +Y G  +  ++ +        S  +  +  + 
Sbjct: 27  NLYKKGNIDFRSKSLYQ-QKWSAKQETRAYHGEHITESRWQTMFSPKLDSVAQLDASLRG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
                        + LE RLD  V+RA F  ++  ARQF+ H +V VNG  +    Y  K
Sbjct: 86  GVTKETPFLMQTFATLEKRLDFAVFRAMFASSVRQARQFILHGNVYVNGVKIKHPGYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            GD   VK        VL+A    +    E + V+   
Sbjct: 146 PGDTFNVKP-----EKVLQALGSKKPSFEEALKVDKKQ 178


>gi|110225704|ref|YP_665709.1| ribosomal protein S4 [Mesostigma viride]
 gi|17222575|gb|AAL36748.1|AF353999_28 ribosomal protein S4 [Mesostigma viride]
          Length = 270

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 21  GRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80
            + K  +  ++        + K   S FG +L+ K+ ++  YG +S  ++++I  + ++ 
Sbjct: 17  LKNKELIFFQNSIKKRRKNQLKRPLSSFGKRLQTKKALEAIYGKLSIPQWKNIISKKNKP 76

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +  +       LE RLD ++ +A+F  +   ARQ++ H  + VN + V       K GD+
Sbjct: 77  KVTS---FFLNLERRLDRVICQARFASSSNMARQWILHEKIFVNNQLVTYPGTILKNGDI 133

Query: 141 IEVKQKSKQL 150
           I +      L
Sbjct: 134 ISLSPDMFSL 143


>gi|151944400|gb|EDN62678.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
           YJM789]
          Length = 486

 Score = 62.3 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 7/158 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76
           NL+ +    + ++S         ++   +Y G  L  K+ +        S  +  +  + 
Sbjct: 27  NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            +           + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +   SY  K
Sbjct: 86  GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            GD+  VK        VLEA    + +  E + ++   
Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPNFQEALKIDKTQ 178


>gi|327195253|ref|YP_004339035.1| ribosomal protein S4 [Coccomyxa sp. C-169]
 gi|325070749|gb|ADY75477.1| ribosomal protein S4 [Coccomyxa sp. C-169]
          Length = 266

 Score = 62.3 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 2/106 (1%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
             + K++  YG+++ ++   + +    +RG  S NL   LESR+D  + R  F  TI  A
Sbjct: 1   MERNKLRIMYGNLANREVDRLIERGLSTRGVLSDNLFRLLESRIDVFLCRIGFFATIPNA 60

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
           RQ+++H  +L+N + V   S+  K GDV+ +   +  +  + E+ +
Sbjct: 61  RQWIHHGKILINRKIVTTASHMLKPGDVVSI--SASNITPLRESLE 104


>gi|322695401|gb|EFY87210.1| 30S ribosomal subunit S4, putative [Metarhizium acridum CQMa 102]
          Length = 525

 Score = 62.3 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RLDT V+RA F  ++  ARQFV H  V VNG+ +   SY+   GD+ +V        
Sbjct: 152 LERRLDTAVFRALFASSVRQARQFVIHGAVKVNGKKMVHPSYQLNPGDMFQVDIDKVMYG 211

Query: 152 SVLEASQLAERDVPEYISVNHDNMVA 177
           +  + +    + + E  +++     A
Sbjct: 212 TGQQKATQGNKRLAE--NLDSRKKKA 235


>gi|323303395|gb|EGA57191.1| Nam9p [Saccharomyces cerevisiae FostersB]
          Length = 486

 Score = 61.9 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76
           NL+ +    + ++S         ++   +Y G  L  K+ +        S  +  +  + 
Sbjct: 27  NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            +           + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +   SY  K
Sbjct: 86  GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            GD+  VK        VLEA    +    E + ++   
Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178


>gi|190409124|gb|EDV12389.1| mitochondrial S4 ribosomal protein [Saccharomyces cerevisiae
           RM11-1a]
 gi|207341770|gb|EDZ69735.1| YNL137Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259149224|emb|CAY82466.1| Nam9p [Saccharomyces cerevisiae EC1118]
 gi|323307464|gb|EGA60737.1| Nam9p [Saccharomyces cerevisiae FostersO]
 gi|323331931|gb|EGA73343.1| Nam9p [Saccharomyces cerevisiae AWRI796]
 gi|323335936|gb|EGA77214.1| Nam9p [Saccharomyces cerevisiae Vin13]
 gi|323346867|gb|EGA81146.1| Nam9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 486

 Score = 61.9 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76
           NL+ +    + ++S         ++   +Y G  L  K+ +        S  +  +  + 
Sbjct: 27  NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            +           + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +   SY  K
Sbjct: 86  GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            GD+  VK        VLEA    +    E + ++   
Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178


>gi|6324192|ref|NP_014262.1| Nam9p [Saccharomyces cerevisiae S288c]
 gi|1346661|sp|P27929|NAM9_YEAST RecName: Full=37S ribosomal protein NAM9, mitochondrial; AltName:
           Full=Nuclear accommodation of mitochondria protein 9;
           Flags: Precursor
 gi|507139|gb|AAA19439.1| NAM9+ protein [Saccharomyces cerevisiae]
 gi|854500|emb|CAA86888.1| mitochondrial ribosomal protein (putative) [Saccharomyces
           cerevisiae]
 gi|1302082|emb|CAA96019.1| NAM9 [Saccharomyces cerevisiae]
 gi|285814517|tpg|DAA10411.1| TPA: Nam9p [Saccharomyces cerevisiae S288c]
          Length = 486

 Score = 61.9 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76
           NL+ +    + ++S         ++   +Y G  L  K+ +        S  +  +  + 
Sbjct: 27  NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            +           + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +   SY  K
Sbjct: 86  GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            GD+  VK        VLEA    +    E + ++   
Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178


>gi|323352538|gb|EGA85037.1| Nam9p [Saccharomyces cerevisiae VL3]
          Length = 486

 Score = 61.9 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76
           NL+ +    + ++S         ++   +Y G  L  K+ +        S  +  +  + 
Sbjct: 27  NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            +           + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +   SY  K
Sbjct: 86  GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            GD+  VK        VLEA    +    E + ++   
Sbjct: 146 PGDMFSVKPDK-----VLEALGAKKPSFQEALKIDKTQ 178


>gi|324309734|gb|ADY18515.1| ribosomal protein S4 [Phaeodactylum tricornutum]
          Length = 249

 Score = 61.9 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 12/140 (8%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIF--------KEADRSRGDTSHNLISFLESRLDTIVYRA 103
           L   +K+   YG I+ ++ +           ++ +  +   +   +   ESRLD +++RA
Sbjct: 82  LHTTKKLALLYGGITSRQLKKYLNLMKKENGRKNNEKKETFNLLPLKKFESRLDIVLHRA 141

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
           KFV +I AARQ + H +V VN   +   S+  + GD IE+     Q  +      L  + 
Sbjct: 142 KFVFSIKAARQLIVHGNVYVNQVKIKSKSHILRPGDSIEMNSSYSQRINESSFQTLKSKP 201

Query: 164 V----PEYISVNHDNMVATF 179
                P ++ +N+  M   F
Sbjct: 202 FWPLPPNHLHINYRTMQIIF 221


>gi|74325180|ref|YP_316600.1| ribosomal protein S4 [Thalassiosira pseudonana]
 gi|74100246|gb|AAZ99407.1| ribosomal protein S4 [Thalassiosira pseudonana]
          Length = 248

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN----LISFLESRLDTIVYRAKFVP 107
           L+ KQ++  +YG++ +   + + KE+ +     +      LI  LE+RLDTI+YR  F  
Sbjct: 89  LQNKQRLSLFYGNLRKSYLKKLVKESLKESKHINSQATVLLIEKLETRLDTILYRTHFCH 148

Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEY 167
           +  +A+Q ++H+ + VN + V    +  K+GD+I + +      +            P++
Sbjct: 149 SFRSAKQLISHQKIYVNNKIVKHNFHALKKGDIITLDKSITNFVASNILKSEMWPIPPKH 208

Query: 168 ISVNHDNMVATFV 180
             +N+  +    +
Sbjct: 209 FYINYRTLQILII 221


>gi|322712486|gb|EFZ04059.1| 30S ribosomal subunit S4 [Metarhizium anisopliae ARSEF 23]
          Length = 489

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RLDT V+RA F  ++  ARQFV H  V VNG+ +   SY+   GD+ +V        
Sbjct: 116 LERRLDTAVFRALFASSVRQARQFVIHGAVKVNGKKMIHPSYQLNPGDMFQVDIDKVMYG 175

Query: 152 SVLEASQLAERDVPEYISVNHDNMVA 177
           +  + +    + + E  +++     A
Sbjct: 176 TGQQKATQGNKRLAE--NLDSRKQKA 199


>gi|295311707|ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo]
 gi|259156835|gb|ACV96696.1| ribosomal protein S4 [Cucurbita pepo]
          Length = 356

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 21/192 (10%)

Query: 2   SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53
           ++      + K  R +  N+W R  + +  R      + +R   +  Y        +QL+
Sbjct: 4   TRYALPALRFKTCRLLLGNVWNRELTIIQRRILRKLRNKRRSIKRKIYSRENLNSYIQLQ 63

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
             +K+  +YGD+   +     +  +          +  LE+RLD I+ R  F  T+  AR
Sbjct: 64  TTRKLSLFYGDLPITEMHRGRERTNYIP------FLLNLETRLDVILVRLHFSSTLPQAR 117

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173
           Q ++HR V VN   V I  ++   GD+I +K+   ++                YI ++ +
Sbjct: 118 QLISHRRVCVNKGMVPITHFKVSHGDLISLKENDARIRGEEIRRSF-------YIEISVE 170

Query: 174 NMVATFVRIPSS 185
            ++  F+  P  
Sbjct: 171 KIIGKFLDHPVR 182


>gi|254569396|ref|XP_002491808.1| Mitochondrial ribosomal component of the small subunit [Pichia
           pastoris GS115]
 gi|238031605|emb|CAY69528.1| Mitochondrial ribosomal component of the small subunit [Pichia
           pastoris GS115]
 gi|328351692|emb|CCA38091.1| 37S ribosomal protein NAM9, mitochondrial [Pichia pastoris CBS
           7435]
          Length = 469

 Score = 61.5 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 26/150 (17%)

Query: 30  RSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG-DISEKKFRSIFKEADR--------- 79
           +   PG +GQ    +         +K + + Y+G  + E K++ IF    +         
Sbjct: 30  KKQRPGFNGQSLYQQKWN------SKAETRAYHGEHLRESKWQHIFSPKLQGVAQLDASL 83

Query: 80  SRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             G+T    +       LE RLD  ++RA F  ++  ARQ++ H++V VNG  +   +Y 
Sbjct: 84  QGGNTDETPMMLQTFAVLEKRLDVALFRAMFASSVRQARQYIIHKYVSVNGVVMRHPNYE 143

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDV 164
            K GDV  V+        VLEA   A+ D+
Sbjct: 144 LKPGDVFSVRPDK-----VLEALGKAKPDL 168


>gi|5442406|gb|AAD43332.1|AF155828_3 ribosomal protein S4 [Dictyostelium discoideum]
          Length = 283

 Score = 61.1 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L   +  +K+Y ++  K+F+ ++K+   +       +I  LE R+D ++ R+ FV +++ 
Sbjct: 91  LTLHRLFRKFYLNLKLKQFKLLYKKYKGNEK----VIIQQLEKRVDMVLLRSGFVRSLYE 146

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           ARQ +NH+H+LVNG+  ++  Y    GD+I  K+ S 
Sbjct: 147 ARQIINHKHLLVNGKIASLPGYMINVGDIISFKEGSM 183


>gi|256273838|gb|EEU08760.1| Nam9p [Saccharomyces cerevisiae JAY291]
          Length = 486

 Score = 61.1 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIFKE 76
           NL+ +    + ++S         ++   +Y G  L  K+ +        S  +  +  + 
Sbjct: 27  NLYKKGGVDLKSKSLYQ-QKWTAKQETRAYHGEHLTEKRWQTVFKPKLDSVAQLDASLRG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            +           + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +   SY  K
Sbjct: 86  GEIKETPFLLQTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLK 145

Query: 137 EGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            GD+  VK        VLEA    +    E + ++   
Sbjct: 146 PGDMFSVKP-----VKVLEALGAKKPSFQEALKIDKTQ 178


>gi|316996026|dbj|BAD83538.2| ribosomal protein S4 [Nicotiana tabacum]
          Length = 349

 Score = 61.1 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 21/193 (10%)

Query: 2   SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53
           ++      + K  R +  N+W R  + +  R      + +R   +  Y        +QL+
Sbjct: 1   TRYALPALRFKTCRLLLGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQLQ 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
             +K+  +YGD+   +     +             +  LE+RLD I+ R  F  TI  AR
Sbjct: 61  TTRKLSLFYGDLPITEMHRGRERTSYIP------FLLNLETRLDVILVRLHFCETIPQAR 114

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173
           Q ++HR V VN   VNI  ++   GD+I  ++       V    +  +R    YI +  +
Sbjct: 115 QLISHRRVCVNNGMVNITHFKLSHGDIISFQEND-----VRTRGEEIKRSF--YIEILVE 167

Query: 174 NMVATFVRIPSSL 186
            ++  F+  P   
Sbjct: 168 KIIGKFLDHPWRR 180


>gi|19113342|ref|NP_596550.1| mitochondrial ribosomal protein subunit S4 [Schizosaccharomyces
           pombe 972h-]
 gi|48474754|sp|O60063|YBB1_SCHPO RecName: Full=Putative 40S ribosomal protein S4-like
 gi|3080526|emb|CAA18654.1| mitochondrial ribosomal protein subunit S4 [Schizosaccharomyces
           pombe]
          Length = 327

 Score = 60.7 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 15/124 (12%)

Query: 53  RAKQKMKKYYGD-ISEKKFRSIFKEA---------DRSRGDTSHNLISFLESRLDTIVYR 102
            AK++ + Y+G  + E + ++ F+           ++      +   +FLESRLD  ++R
Sbjct: 45  NAKKETRSYHGPQLREYQLKNAFRPKLEGVISSLDNKLPIPFMNQTYAFLESRLDMSIHR 104

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           A F  +   ARQ V H  V VNG+       +   GD++ V        SV+     +  
Sbjct: 105 ALFASSALQARQLVLHGKVHVNGKPERRAYRQLLPGDLVTV-----DQKSVMNCVSASSN 159

Query: 163 DVPE 166
           + P 
Sbjct: 160 NTPS 163


>gi|260222203|emb|CBA31531.1| hypothetical protein Csp_F38010 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 50

 Score = 60.7 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 156 ASQLAER-DVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           + QLA++  +P ++ V+ +    TF  +P   +   +   +  +L+VE YSR
Sbjct: 2   SLQLAQQVGLPAWVEVSVEKAEGTFKTVPDRDQ---FGADINESLIVELYSR 50


>gi|302510661|ref|XP_003017282.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371]
 gi|291180853|gb|EFE36637.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371]
          Length = 526

 Score = 60.7 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 75  KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           +E  R   DT + L++F  LE RLD  ++RA F  +   ARQFV H  V VNG+ +    
Sbjct: 113 REDGRQVPDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 172

Query: 133 YRCKEGDVIEV 143
           Y    GD+ +V
Sbjct: 173 YLLNPGDMFQV 183


>gi|323435070|ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. maritima]
 gi|317905723|emb|CBJ14108.1| ribosomal protein S4 [Beta vulgaris subsp. maritima]
 gi|319439803|emb|CBJ17515.1| ribosomal protein S4 [Beta vulgaris subsp. maritima]
          Length = 315

 Score = 60.7 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 6/104 (5%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K     +QLR  +K+  +YG++   K         R++  +    +  LE+RLD I+ R
Sbjct: 46  RKNRNSYIQLRTTRKLSLFYGNLPITKMHR------RTKRTSYIPFLLNLETRLDVILVR 99

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             F  TI  ARQ ++HR V VN   VNI  ++   GD+I  ++ 
Sbjct: 100 LHFCETIPQARQLISHRKVCVNNGIVNISHFKVSHGDIISFQEN 143


>gi|294669848|ref|ZP_06734907.1| hypothetical protein NEIELOOT_01741 [Neisseria elongata subsp.
          glycolytica ATCC 29315]
 gi|291308241|gb|EFE49484.1| hypothetical protein NEIELOOT_01741 [Neisseria elongata subsp.
          glycolytica ATCC 29315]
          Length = 71

 Score = 60.7 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRP-KSPVNTRSY---GPGLHGQRRK 42
          M++    K K+ RR G +L+ +  +  V ++      PG HG ++ 
Sbjct: 1  MARYIGPKCKLARREGTDLFLKSARRSVESKCKFDSAPGQHGAKKH 46


>gi|162279921|ref|NP_064046.2| ribosomal protein S4 [Beta vulgaris subsp. vulgaris]
 gi|87248052|gb|ABD36080.1| ribosomal protein S4 [Beta vulgaris subsp. vulgaris]
 gi|148491424|dbj|BAA99356.2| ribosomal protein S4 [Beta vulgaris subsp. vulgaris]
 gi|320148708|emb|CBJ23346.1| ribosomal protein S4 [Beta vulgaris subsp. maritima]
          Length = 315

 Score = 60.7 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 6/104 (5%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            K     +QLR  +K+  +YG++   K         R++  +    +  LE+RLD I+ R
Sbjct: 46  RKNRNSYIQLRTTRKLSLFYGNLPITKMHR------RTKRTSYIPFLLNLETRLDVILVR 99

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             F  TI  ARQ ++HR V VN   VNI  ++   GD+I  ++ 
Sbjct: 100 LHFCETIPQARQLISHRKVCVNNGIVNISHFKVSHGDIISFQEN 143


>gi|119632785|gb|ABL84398.1| ribosomal protein S4 [Streptococcus suis]
          Length = 64

 Score = 60.3 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%)

Query: 141 IEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLV 200
           I V++KS ++ ++LEA + A    P ++S + + +  +  R+P   +       +   LV
Sbjct: 1   ISVREKSIKVPAILEAVE-ATLGRPAFVSFDAEKLEGSLTRLPERDE---INPEINEALV 56

Query: 201 VEFYSR 206
           VEFY++
Sbjct: 57  VEFYNK 62


>gi|7525008|ref|NP_050106.1| ribosomal protein S4 [Dictyostelium discoideum]
 gi|74849891|sp|Q9XPI8|RT04_DICDI RecName: Full=Ribosomal protein S4, mitochondrial
 gi|4958911|dbj|BAA78088.1| ribosomal protein S4 [Dictyostelium discoideum]
          Length = 300

 Score = 60.3 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 52  LRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFA 111
           L   +  +K+Y ++  K+F+ ++K+   +       +I  LE R+D ++ R+ FV +++ 
Sbjct: 108 LTLHRLFRKFYLNLKLKQFKLLYKKYKGNEK----VIIQQLEKRVDMVLLRSGFVRSLYE 163

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           ARQ +NH+H+LVNG+  ++  Y    GD+I  K+ S 
Sbjct: 164 ARQIINHKHLLVNGKIASLPGYMINVGDIISFKEGSM 200


>gi|302024640|ref|ZP_07249851.1| 30S ribosomal protein S4 [Streptococcus suis 05HAS68]
          Length = 49

 Score = 60.3 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY 47
          MS+      K  RR+G +L G  K  +  R+Y PG HG   +S  S 
Sbjct: 1  MSRYTGPSWKQARRLGLSLTGTGKE-LARRNYVPGQHGPYNRSTLSD 46


>gi|54606786|dbj|BAD66809.1| ribosomal protein S4 [Beta vulgaris subsp. vulgaris]
          Length = 315

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 15/123 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
           K  +  + Y           K     +QLR  +K+  ++G++   K         R++  
Sbjct: 36  KKSIKKKMYP---------RKNRNSYIQLRTTRKLSLFHGNLPITKMHR------RTKRT 80

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +    +   E+RLD I+ R  F  TI  ARQ ++HR V VN   VNI  ++   GD+I  
Sbjct: 81  SYIPFLLNPETRLDVILVRLHFCETIPQARQPISHRKVCVNNGIVNISHFKVSHGDIISF 140

Query: 144 KQK 146
           ++ 
Sbjct: 141 QEN 143


>gi|156841474|ref|XP_001644110.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114745|gb|EDO16252.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 482

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
              S LE RLD  ++R+ F  +I  ARQF+ H +V VNG  V    Y  K GD+  VK  
Sbjct: 96  QTYSVLEKRLDFALFRSMFASSIRQARQFIIHGNVYVNGTKVKHPGYTLKPGDMFNVKP- 154

Query: 147 SKQLASVLEASQLAERDVPEYISVNH 172
                 VL+A    +  + E + ++ 
Sbjct: 155 ----EMVLKALGYKKPSLLEGLKIDK 176


>gi|295658597|ref|XP_002789859.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226283003|gb|EEH38569.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 453

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 165 LERRLDVAIFRAMFASSTRQARQFVLHGSVTVNGKKMKHPGYLLNPGDLFQV 216


>gi|15897040|ref|NP_341645.1| 30S ribosomal protein S4P [Sulfolobus solfataricus P2]
 gi|284173384|ref|ZP_06387353.1| 30S ribosomal protein S4P [Sulfolobus solfataricus 98/2]
 gi|2500401|sp|P95987|RS4_SULSO RecName: Full=30S ribosomal protein S4P
 gi|1707821|emb|CAA69529.1| ribosomal protein S4 [Sulfolobus solfataricus P2]
 gi|13813205|gb|AAK40435.1| SSU ribosomal protein S4AB (rps4AB) [Sulfolobus solfataricus P2]
 gi|261601694|gb|ACX91297.1| ribosomal protein S4 [Sulfolobus solfataricus 98/2]
          Length = 181

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQ 145
             LE RL TIVY+     TI+ ARQ + H H+ VNG+ V    Y     +       V  
Sbjct: 100 DLLERRLQTIVYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTS 159

Query: 146 KSKQLASVLEASQLAERDV 164
             K    V+   +  E  V
Sbjct: 160 SFKSRPPVMSQQEGGEIGV 178


>gi|240273798|gb|EER37317.1| NAM9+ protein [Ajellomyces capsulatus H143]
 gi|325094771|gb|EGC48081.1| NAM9+ protein [Ajellomyces capsulatus H88]
          Length = 490

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 30/60 (50%)

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
                 + LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDLFQV 174


>gi|302348808|ref|YP_003816446.1| 30S ribosomal protein S4P [Acidilobus saccharovorans 345-15]
 gi|302329220|gb|ADL19415.1| 30S ribosomal protein S4P [Acidilobus saccharovorans 345-15]
          Length = 177

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 32/73 (43%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RL T+VYR     TI+ ARQ V H H+ +NGR V    Y     +   ++       
Sbjct: 101 LERRLQTLVYRKGLAKTIYQARQLVTHGHIAINGRRVTSPGYIVPRDEEDRIEIAPGSPL 160

Query: 152 SVLEASQLAERDV 164
                    E+DV
Sbjct: 161 RASAQQSGGEQDV 173


>gi|225555459|gb|EEH03751.1| NAM9+ protein [Ajellomyces capsulatus G186AR]
          Length = 490

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 30/60 (50%)

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
                 + LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDLFQV 174


>gi|323478100|gb|ADX83338.1| ribosomal protein S4 [Sulfolobus islandicus HVE10/4]
          Length = 181

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQ 145
             LE RL TIVY+     T + ARQ + H H+ VNG+ V    Y     +       V  
Sbjct: 100 DLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTS 159

Query: 146 KSKQLASVLEASQLAERDV 164
             K    V+   +  E  V
Sbjct: 160 SFKSRPPVMAQQEGGEAGV 178


>gi|227828305|ref|YP_002830085.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.14.25]
 gi|227831063|ref|YP_002832843.1| 30S ribosomal protein S4P [Sulfolobus islandicus L.S.2.15]
 gi|229579944|ref|YP_002838343.1| 30S ribosomal protein S4P [Sulfolobus islandicus Y.G.57.14]
 gi|229581395|ref|YP_002839794.1| 30S ribosomal protein S4P [Sulfolobus islandicus Y.N.15.51]
 gi|229585535|ref|YP_002844037.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.16.27]
 gi|238620497|ref|YP_002915323.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.16.4]
 gi|284998559|ref|YP_003420327.1| ribosomal protein S4 [Sulfolobus islandicus L.D.8.5]
 gi|259495293|sp|C3N052|RS4_SULIA RecName: Full=30S ribosomal protein S4P
 gi|259495294|sp|C4KJ91|RS4_SULIK RecName: Full=30S ribosomal protein S4P
 gi|259495295|sp|C3MJP5|RS4_SULIL RecName: Full=30S ribosomal protein S4P
 gi|259495296|sp|C3MZ03|RS4_SULIM RecName: Full=30S ribosomal protein S4P
 gi|259495297|sp|C3NMQ2|RS4_SULIN RecName: Full=30S ribosomal protein S4P
 gi|259495298|sp|C3N8R6|RS4_SULIY RecName: Full=30S ribosomal protein S4P
 gi|227457511|gb|ACP36198.1| ribosomal protein S4 [Sulfolobus islandicus L.S.2.15]
 gi|227460101|gb|ACP38787.1| ribosomal protein S4 [Sulfolobus islandicus M.14.25]
 gi|228010659|gb|ACP46421.1| ribosomal protein S4 [Sulfolobus islandicus Y.G.57.14]
 gi|228012111|gb|ACP47872.1| ribosomal protein S4 [Sulfolobus islandicus Y.N.15.51]
 gi|228020585|gb|ACP55992.1| ribosomal protein S4 [Sulfolobus islandicus M.16.27]
 gi|238381567|gb|ACR42655.1| ribosomal protein S4 [Sulfolobus islandicus M.16.4]
 gi|284446455|gb|ADB87957.1| ribosomal protein S4 [Sulfolobus islandicus L.D.8.5]
 gi|323475375|gb|ADX85981.1| ribosomal protein S4 [Sulfolobus islandicus REY15A]
          Length = 181

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQ 145
             LE RL TIVY+     T + ARQ + H H+ VNG+ V    Y     +       V  
Sbjct: 100 DLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTS 159

Query: 146 KSKQLASVLEASQLAERDV 164
             K    V+   +  E  V
Sbjct: 160 SFKSRPPVMAQQEGGEAGV 178


>gi|226321920|ref|ZP_03797446.1| 30S ribosomal protein S4 [Borrelia burgdorferi Bol26]
 gi|226233109|gb|EEH31862.1| 30S ribosomal protein S4 [Borrelia burgdorferi Bol26]
          Length = 77

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEASQ--LAERDVPEYISVNHDNMVATFVRIPSSLKD 188
                +  D I++K+K      +    +   + R++P +I VN D++       PS  + 
Sbjct: 1   PFIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLNIKVKHAPSRDE- 59

Query: 189 VPYPVIMQPNLVVEFYSR 206
              P +    +VVE+YS+
Sbjct: 60  --IPTLANEQMVVEYYSK 75


>gi|50546507|ref|XP_500723.1| YALI0B10494p [Yarrowia lipolytica]
 gi|49646589|emb|CAG82968.1| YALI0B10494p [Yarrowia lipolytica]
          Length = 571

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             + +   +      LE RLD  V+R+ F  +I  A QF+   +V VNG  +   SY  K
Sbjct: 106 NKKLKTPFAMQTFVHLEKRLDFAVFRSMFAASIRQAGQFIRQGNVTVNGVKIKHASYTLK 165

Query: 137 EGDVIEVKQKS------KQLASVLEASQLAERDVPEY 167
            GD+I VK +       K   SV EA ++  R + +Y
Sbjct: 166 PGDLISVKPEKVLFAAGKAKPSVEEAVKIDNRQIKKY 202


>gi|327295753|ref|XP_003232571.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892]
 gi|326464882|gb|EGD90335.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892]
          Length = 500

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 75  KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           +E  R   DT + L++F  LE RLD  ++RA F  +   ARQFV H  V VNG+ +    
Sbjct: 103 REDGRQVPDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 162

Query: 133 YRCKEGDVIEV 143
           Y    GD+ +V
Sbjct: 163 YLLNPGDMFQV 173


>gi|302660531|ref|XP_003021944.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517]
 gi|291185865|gb|EFE41326.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517]
          Length = 509

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 75  KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           KE  R   DT + L++F  LE RLD  ++RA F  +   ARQFV H  V VNG+ +    
Sbjct: 116 KEDGRQVQDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 175

Query: 133 YRCKEGDVIEV 143
           Y    GD+ +V
Sbjct: 176 YLLNPGDMFQV 186


>gi|50303139|ref|XP_451507.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640638|emb|CAH03095.1| KLLA0A11660p [Kluyveromyces lactis]
          Length = 482

 Score = 59.6 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 12/150 (8%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA 77
           NL+ + +    +++         ++   +Y G  L   +     +  + E +  S+ +  
Sbjct: 27  NLYKKSQVSFRSKTLYQ-QKWTSKQETRAYHGEHLTESR-----WQSVFEPQLNSVAQLD 80

Query: 78  DRSR------GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
              R              + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +   
Sbjct: 81  ASLRGGDIEPTPILLQTYAVLEKRLDFALFRAMFASSVRQARQFILHGNVHVNGVKITSP 140

Query: 132 SYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
            Y  K GDV  V+ +    A   +   L E
Sbjct: 141 GYALKAGDVFNVRPEKVLQALGAKKPSLKE 170


>gi|326472324|gb|EGD96333.1| 30S ribosomal subunit S4 [Trichophyton tonsurans CBS 112818]
          Length = 483

 Score = 59.6 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 75  KEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           +E  R   DT + L++F  LE RLD  ++RA F  +   ARQFV H  V VNG+ +    
Sbjct: 103 REDGRQVQDTPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPG 162

Query: 133 YRCKEGDVIEV 143
           Y    GD+ +V
Sbjct: 163 YLLNPGDMFQV 173


>gi|160688766|gb|ABX45182.1| ribosomal protein S4 [Polysphondylium pallidum]
          Length = 268

 Score = 59.6 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 6/137 (4%)

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           +K + YY ++  ++ ++I+ +  R++       +  LE RLD+I+ R+ F  T+++AR F
Sbjct: 108 RKFRYYYKNLKIRQIKNIYSQLKRNKKKV-KIFMEILECRLDSILVRSNFFQTMYSARHF 166

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER-----DVPEYISV 170
           + + H+ VNG  +N  +Y    GD+I + +   +L       +L  +       P ++  
Sbjct: 167 IKYNHISVNGILINKINYNTNIGDLIGLNKNDIKLKIKKILKKLVRKHKFISTSPAFLET 226

Query: 171 NHDNMVATFVRIPSSLK 187
           ++  ++ T +  P   +
Sbjct: 227 DYRLLLTTLIYKPRKEE 243


>gi|296420306|ref|XP_002839716.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635910|emb|CAZ83907.1| unnamed protein product [Tuber melanosporum]
          Length = 366

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 29/56 (51%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           +E RLD  V+RA F  +   ARQFV H  V VNG+ +    Y    GD+  V Q  
Sbjct: 175 MERRLDMAVHRAMFASSARQARQFVVHGFVKVNGKKMVHPGYMLNPGDMFSVNQDQ 230


>gi|51458159|gb|AAU03428.1| ribosomal protein small subunit 4 [Asplenium petrarchae subsp.
           bivalens]
          Length = 92

 Score = 59.2 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHD 173
           NHR++LVN  + +I SYRCK  D I V+ +     ++   S + ++  P  +       D
Sbjct: 2   NHRNILVNNCNGDIPSYRCKPKDFITVRNRPTSCNALRNKSMVGDKT-PGALDRSLSEGD 60

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  R+          + +   LVVE+YSR
Sbjct: 61  RPTGLVNRV---ANRESINLNINELLVVEYYSR 90


>gi|226290430|gb|EEH45914.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 512

 Score = 59.2 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 123 LERRLDVAIFRAMFASSTRQARQFVLHGSVTVNGKKMKYPGYLLNPGDLFQV 174


>gi|293376357|ref|ZP_06622594.1| 30S ribosomal protein S4 domain protein [Turicibacter sanguinis
          PC909]
 gi|292645046|gb|EFF63119.1| 30S ribosomal protein S4 domain protein [Turicibacter sanguinis
          PC909]
          Length = 44

 Score = 59.2 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSK 44
          M++      KI RR+G ++    K  +  R Y PG HGQ RK  
Sbjct: 1  MARYTGPSWKISRRLGYSILENGKE-LQKRPYAPGQHGQSRKKN 43


>gi|121702393|ref|XP_001269461.1| 30S ribosomal subunit  S4, putative [Aspergillus clavatus NRRL 1]
 gi|119397604|gb|EAW08035.1| 30S ribosomal subunit S4, putative [Aspergillus clavatus NRRL 1]
          Length = 464

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 30/55 (54%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+  
Sbjct: 122 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPD 176


>gi|255711504|ref|XP_002552035.1| KLTH0B05698p [Lachancea thermotolerans]
 gi|238933413|emb|CAR21597.1| KLTH0B05698p [Lachancea thermotolerans]
          Length = 480

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
              + LE RLD  ++RA F  ++  ARQF+ H +V VNG  +    Y  K GDV  VK  
Sbjct: 96  QTFAVLEKRLDFALFRAMFASSVRQARQFILHGNVFVNGIKITQPGYPLKAGDVFNVKP- 154

Query: 147 SKQLASVLEASQLAERDVPEYISVNH 172
                 VL+A    +  + E + ++ 
Sbjct: 155 ----EKVLQALGAKKPSLSEALKIDK 176


>gi|225682980|gb|EEH21264.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 513

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 123 LERRLDVAIFRAMFASSTRQARQFVLHGSVTVNGKKMKYPGYLLNPGDLFQV 174


>gi|261193076|ref|XP_002622944.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis SLH14081]
 gi|239589079|gb|EEQ71722.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis SLH14081]
 gi|327352581|gb|EGE81438.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis ATCC 18188]
          Length = 498

 Score = 58.8 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 29/60 (48%)

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
                 + LE RLD  ++RA F  +   ARQFV H  V VNG  +    Y    GD+ +V
Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVVHGFVTVNGTKMRHPGYLLNPGDLFQV 174


>gi|239613660|gb|EEQ90647.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis ER-3]
          Length = 498

 Score = 58.8 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 29/60 (48%)

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
                 + LE RLD  ++RA F  +   ARQFV H  V VNG  +    Y    GD+ +V
Sbjct: 115 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVVHGFVTVNGTKMRHPGYLLNPGDLFQV 174


>gi|302882319|ref|XP_003040070.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI
           77-13-4]
 gi|256720937|gb|EEU34357.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI
           77-13-4]
          Length = 511

 Score = 58.4 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           LE RLDT V+RA F  ++  ARQF+ H  V VNG+ +   SY    GD+ +V+ + 
Sbjct: 160 LERRLDTAVFRAMFASSVRQARQFIIHGAVKVNGKKMVHPSYALNPGDMFQVQIEK 215


>gi|319738222|emb|CBJ17998.1| ribosomal protein S4 [Ectocarpus siliculosus]
          Length = 265

 Score = 58.4 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 24/185 (12%)

Query: 38  GQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLD 97
            Q  K     +   L     +K++YGD+  K F+  F ++     D+S  L+S LE RLD
Sbjct: 74  NQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKG-FCQSGFKSKDSSLKLLSSLEGRLD 132

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE-- 155
             +YR  F  +I+ +RQ + H  VLVNG+ +  G +  ++GD +E     +         
Sbjct: 133 MCLYRLGFFHSIYYSRQAILHNKVLVNGKKIGHGGFVLQKGDFVEFCPTQRAAIRARLVA 192

Query: 156 ---------------------ASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVI 194
                                  +L  +  P++I  ++ N+         +    P+   
Sbjct: 193 RYKRFRSPHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDACAFALFPFRAN 252

Query: 195 MQPNL 199
           +   L
Sbjct: 253 IDEAL 257


>gi|317030176|ref|XP_001392029.2| S4 domain containing protein [Aspergillus niger CBS 513.88]
          Length = 465

 Score = 58.4 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  V+RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+ +
Sbjct: 135 LERRLDVAVFRAMFASSTRQARQFVIHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 189


>gi|154287040|ref|XP_001544315.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407956|gb|EDN03497.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 453

 Score = 58.4 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 30/60 (50%)

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
                 + LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 154 HMQMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNSGDLFQV 213


>gi|119196147|ref|XP_001248677.1| hypothetical protein CIMG_02448 [Coccidioides immitis RS]
 gi|303321920|ref|XP_003070954.1| S4 domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110651|gb|EER28809.1| S4 domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 463

 Score = 58.4 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 129 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQYPGYLLNPGDLFQV 180


>gi|134076525|emb|CAK39720.1| unnamed protein product [Aspergillus niger]
          Length = 436

 Score = 58.4 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  V+RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+ +
Sbjct: 106 LERRLDVAVFRAMFASSTRQARQFVIHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 160


>gi|320040475|gb|EFW22408.1| 30S ribosomal subunit S4 [Coccidioides posadasii str. Silveira]
          Length = 463

 Score = 58.4 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 129 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQYPGYLLNPGDLFQV 180


>gi|46121899|ref|XP_385503.1| hypothetical protein FG05327.1 [Gibberella zeae PH-1]
          Length = 514

 Score = 58.4 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/52 (48%), Positives = 32/52 (61%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLDT V+RA F  ++  ARQFV H  V VNG+ +   SY    GD+ +V
Sbjct: 160 LERRLDTAVFRAMFASSVRQARQFVIHGAVKVNGKKMVHPSYALNPGDMFQV 211


>gi|116196236|ref|XP_001223930.1| hypothetical protein CHGG_04716 [Chaetomium globosum CBS 148.51]
 gi|88180629|gb|EAQ88097.1| hypothetical protein CHGG_04716 [Chaetomium globosum CBS 148.51]
          Length = 382

 Score = 58.4 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              + + +E RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V 
Sbjct: 46  MQMMFAPMERRLDIAIFRALFASSARQARQFVLHGAVTVNGKKMTYPGYLLNPGDMFQV- 104

Query: 145 QKSKQLASVLEASQLAERD 163
               ++  V+ A+   +R 
Sbjct: 105 ----EIERVMAATGKPKRK 119


>gi|328774061|gb|EGF84098.1| hypothetical protein BATDEDRAFT_4674 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 216

 Score = 58.0 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 21/150 (14%)

Query: 55  KQKMKKYYG-DISEKKF-----------RSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
           K++++ Y+  +I E++F           R +  E               LE R D +++R
Sbjct: 42  KRELRGYHVPNIHERQFLNRHFESYLPNRQLTPEEKSKIPPIQTLAFGELERRPDVVLFR 101

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           + F  +I+ ARQ V  R VLVNG      + R ++GD++ V  K+       + +Q+   
Sbjct: 102 SHFADSIWKARQMVASRCVLVNGERCRYAARRLQDGDMVTVIPKAIPTLKGQKGTQMKFH 161

Query: 163 D---------VPEYISVNHDNMVATFVRIP 183
                      P Y+ V+++     F+R P
Sbjct: 162 PKAYMSPWMFTPAYLEVDYNTCSTVFLRSP 191


>gi|70991196|ref|XP_750447.1| 30S ribosomal subunit  S4 [Aspergillus fumigatus Af293]
 gi|66848079|gb|EAL88409.1| 30S ribosomal subunit  S4, putative [Aspergillus fumigatus Af293]
 gi|159130921|gb|EDP56034.1| 30S ribosomal subunit S4, putative [Aspergillus fumigatus A1163]
          Length = 469

 Score = 58.0 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+ +
Sbjct: 127 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 181


>gi|67537988|ref|XP_662768.1| hypothetical protein AN5164.2 [Aspergillus nidulans FGSC A4]
 gi|40743155|gb|EAA62345.1| hypothetical protein AN5164.2 [Aspergillus nidulans FGSC A4]
 gi|259484618|tpe|CBF80996.1| TPA: 30S ribosomal subunit S4, putative (AFU_orthologue;
           AFUA_1G06980) [Aspergillus nidulans FGSC A4]
          Length = 457

 Score = 58.0 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           R++   ++   + LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    G
Sbjct: 110 RTKTPYTNMTFAPLERRLDVAIFRALFASSARQARQFVLHGAVTVNGKKMRYPGYLLNPG 169

Query: 139 DVIEV 143
           D+ +V
Sbjct: 170 DMFQV 174


>gi|189197847|ref|XP_001935261.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187981209|gb|EDU47835.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 426

 Score = 58.0 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 76  EADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
           E  R+   T +  +++  LE RLDT ++RA F  ++  ARQFV H  V VNG+ +    Y
Sbjct: 104 EKARTPPMTPYMQMAYYPLERRLDTAIFRALFASSVRQARQFVVHGLVKVNGKKMIYPGY 163

Query: 134 RCKEGDVIEVKQKS 147
               GD+ +V+  S
Sbjct: 164 ALNPGDMFQVEPSS 177


>gi|115388607|ref|XP_001211809.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195893|gb|EAU37593.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 457

 Score = 58.0 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+ +
Sbjct: 124 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKKMRYPGYLLNPGDMFQVEPE 178


>gi|45198580|ref|NP_985609.1| AFR062Cp [Ashbya gossypii ATCC 10895]
 gi|44984531|gb|AAS53433.1| AFR062Cp [Ashbya gossypii ATCC 10895]
          Length = 473

 Score = 58.0 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 18  NLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQL-RAKQKMKKYYGDISEKKFRSIFKE 76
           NL+ + +  + T++         ++   +Y G  L  ++ +        S  +  +  K 
Sbjct: 27  NLYKKSQIDLRTKTLYQ-QKWSSKQETRAYHGEHLTESRWQSTFSPRLTSVAQLDASLKG 85

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            D +         + LE RL+  ++RA F  ++  ARQF+ H +V VNG ++    Y  K
Sbjct: 86  GDVAPTPILMQTYAVLEKRLEFALFRAMFASSVRQARQFILHGNVYVNGVTMKHPGYPLK 145

Query: 137 EGDVIEVKQKS 147
            GD+  V+   
Sbjct: 146 AGDMFSVRPDK 156


>gi|119496387|ref|XP_001264967.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181]
 gi|119413129|gb|EAW23070.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181]
          Length = 469

 Score = 58.0 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+ +
Sbjct: 127 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDLFQVEPE 181


>gi|212538099|ref|XP_002149205.1| 30S ribosomal subunit  S4, putative [Penicillium marneffei ATCC
           18224]
 gi|210068947|gb|EEA23038.1| 30S ribosomal subunit S4, putative [Penicillium marneffei ATCC
           18224]
          Length = 439

 Score = 57.6 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+ +
Sbjct: 120 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQFPGYLLNPGDLFQVEPE 174


>gi|315045031|ref|XP_003171891.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893]
 gi|311344234|gb|EFR03437.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893]
          Length = 475

 Score = 57.6 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 77  ADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             R   +T + L++F  LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y 
Sbjct: 103 KTRQVPETPYMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYL 162

Query: 135 CKEGDVIEV 143
              GD+ +V
Sbjct: 163 LNPGDMFQV 171


>gi|330946008|ref|XP_003306674.1| hypothetical protein PTT_19866 [Pyrenophora teres f. teres 0-1]
 gi|311315724|gb|EFQ85225.1| hypothetical protein PTT_19866 [Pyrenophora teres f. teres 0-1]
          Length = 426

 Score = 57.6 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 76  EADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
           E  R+   T +  +++  LE RLDT ++RA F  ++  ARQFV H  V VNG+ +    Y
Sbjct: 104 EKVRTPPMTPYMQMAYYPLERRLDTAIFRALFASSVRQARQFVVHGLVKVNGKKMIYPGY 163

Query: 134 RCKEGDVIEVKQKS 147
               GD+ +V+  S
Sbjct: 164 ALNPGDMFQVEPSS 177


>gi|213402771|ref|XP_002172158.1| 37S ribosomal protein NAM9 [Schizosaccharomyces japonicus yFS275]
 gi|212000205|gb|EEB05865.1| 37S ribosomal protein NAM9 [Schizosaccharomyces japonicus yFS275]
          Length = 307

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 18/149 (12%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGD-I 65
            K  + R++    W +  +        P L+G+    K          K++ + ++G  +
Sbjct: 5   PKFSLSRQLLRPSWNKYNAFNFACKKLPNLNGKTLFQKKWIA------KRETRSFHGPHL 58

Query: 66  SEKKFRSIFKEA-----------DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQ 114
            E +F++ F+             + S+      L + LESRLD  ++RA F  ++  A +
Sbjct: 59  REYQFKNYFESKLLGMTSVNSPAENSKIPFMSQLYAPLESRLDIALHRAMFASSVEQAHK 118

Query: 115 FVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            +    V VNG        R + GDV+ V
Sbjct: 119 IIVSNKVSVNGIREKRAHLRLEPGDVVTV 147


>gi|296810354|ref|XP_002845515.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480]
 gi|238842903|gb|EEQ32565.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480]
          Length = 477

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 35/79 (44%)

Query: 65  ISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVN 124
           + E++     K              + LE RLD  ++RA F  +   ARQFV H  V VN
Sbjct: 101 LPEEQGGRDRKAQKPRDTPYMQMTFAPLERRLDVAIFRALFASSTRQARQFVIHGGVTVN 160

Query: 125 GRSVNIGSYRCKEGDVIEV 143
           G+ +    Y    GD+ +V
Sbjct: 161 GKKMQYPGYLLNPGDMFQV 179


>gi|242807612|ref|XP_002484992.1| 30S ribosomal subunit  S4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715617|gb|EED15039.1| 30S ribosomal subunit S4, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 443

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V+ +
Sbjct: 120 LERRLDVAIFRAMFASSTRQARQFVVHGAVTVNGKKMQFPGYLLNPGDLFQVEPE 174


>gi|331252013|ref|XP_003338582.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309317572|gb|EFP94163.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 399

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%)

Query: 29  TRSYGPGLHGQR--RKSKPSYFGLQLRAKQKMKKYYGD-ISEKKFRSIFKE--------- 76
            RS+GP        R SK  Y+  + R+K   + Y+GD I EKKF+  +           
Sbjct: 29  QRSFGPENKDTNFLRSSKTVYW-QKWRSKAVTRAYHGDWIQEKKFKRHYLPASLPALAVK 87

Query: 77  ---------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                        +   +  +   LE RLD  ++R+ F  +++ AR+ V H  V +NG  
Sbjct: 88  SSLKKSRYGNREEKVPLAALMYQELERRLDVAIFRSCFADSVYEARRIVIHGAVKLNGVK 147

Query: 128 VNIGSYRCKEGDVIEV 143
            N    R   GD+  V
Sbjct: 148 CNAPWTRLHPGDMFTV 163


>gi|320581194|gb|EFW95415.1| Mitochondrial ribosomal component of the small subunit [Pichia
           angusta DL-1]
          Length = 476

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 15/123 (12%)

Query: 54  AKQKMKKYYG-DISEKKFRSIFKEA------------DRSRGDTSHN--LISFLESRLDT 98
           +KQK + Y+G  I E ++  +F++              ++  +T       + LE RLD 
Sbjct: 48  SKQKTRGYHGEHIPEGRWLKLFQKKLDGVAQMDASLSGKANDETPMVLQTFAVLEKRLDV 107

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ 158
            V+RA F  ++  ARQF+    V VNG  +   SY    GDV  V+      A   +   
Sbjct: 108 AVFRAMFASSVRQARQFILAGDVKVNGVPIKHPSYPLSPGDVFSVEPDRVLQALGEKKPS 167

Query: 159 LAE 161
           L E
Sbjct: 168 LKE 170


>gi|239811700|gb|ACS27186.1| ribosomal protein S4 [Heterosigma akashiwo]
          Length = 268

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 22/177 (12%)

Query: 1   MSKRESSKHKIDRRIGENL---WGRPKSPVNTRS-YGPGLHGQRRKSKPSYFGLQLRAKQ 56
           MS  +  + K   R+ +++   +   K      S +     G++  +   +F  QL  K 
Sbjct: 1   MSHFKKPRFKSYVRLAKDIRNDFKTDKFNRLKWSTFKKIQEGKKITNFFHHFESQLTKKH 60

Query: 57  KMKKYYGD----------ISEKKFRSIFKEADRSRGDT--------SHNLISFLESRLDT 98
           ++   +G+          +  K+  + F +    +  T          N +  LE RLD 
Sbjct: 61  QLTSNFGNQRLKNLFKENLLTKQRLATFYKLQSYKFKTLIRQNAKKQINFLYLLERRLDV 120

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           I+YR  FV ++  +RQ ++H+ V VN   +   ++  K+GD+IE++   K   +  +
Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIEIQMHPKPTVNAQK 177


>gi|11467052|ref|NP_042528.1| ribosomal protein S4 [Acanthamoeba castellanii]
 gi|1173304|sp|P46755|RT04_ACACA RecName: Full=Ribosomal protein S4, mitochondrial
 gi|562033|gb|AAD11821.1| ribosomal protein S4 [Acanthamoeba castellanii]
          Length = 374

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 4/133 (3%)

Query: 56  QKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
           +K+  ++G      F  ++  A       S  +   LE RL+  + R    P+I+  ++F
Sbjct: 221 KKVSLFFGFRKVVDFFKVYNLAGALAKGNSFAVFLMLEGRLENFLMRLNLFPSIYFIKKF 280

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV----PEYISVN 171
           + + +V VN + +N  SY     +++   +K  +       S+L +R V    P ++ V+
Sbjct: 281 IEYGNVFVNNKIINYTSYHLNFNEIVSFNKKYYKKLYFFIKSKLRQRKVIINAPSFVEVD 340

Query: 172 HDNMVATFVRIPS 184
           +  +VA  +R P 
Sbjct: 341 YKLLVAMLIRNPD 353


>gi|255948696|ref|XP_002565115.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592132|emb|CAP98457.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 457

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 32/58 (55%)

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           H   + LE RLD  ++RA F  +   ARQFV H  V VNG+ +   SY    GD+ +V
Sbjct: 115 HMTFAPLERRLDVAIFRALFASSARQARQFVIHGAVTVNGQKMKHPSYLLNPGDLFQV 172


>gi|239811660|gb|ACS27147.1| ribosomal protein S4 [Heterosigma akashiwo]
          Length = 268

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 22/177 (12%)

Query: 1   MSKRESSKHKIDRRIGENL---WGRPKSPVNTRS-YGPGLHGQRRKSKPSYFGLQLRAKQ 56
           MS  +  + K   R+ +++   +   K      S +     G++  +   +F  QL  K 
Sbjct: 1   MSHFKKPRFKSYVRLAKDIRNDFKTDKFNRLKWSTFKKIQEGKKITNFFHHFESQLTKKH 60

Query: 57  KMKKYYGD----------ISEKKFRSIFKEADRSRGDT--------SHNLISFLESRLDT 98
           ++   +G+          +  K+  + F +    +  T          N +  LE RLD 
Sbjct: 61  QLTSNFGNQRLKNLFKENLLTKQRLATFYKLQSYKFKTLIRQNAKRQINFLYLLERRLDV 120

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           I+YR  FV ++  +RQ ++H+ V VN   +   ++  K+GD+IE++   K   +  +
Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIEIQMHPKPTVNAQK 177


>gi|147919300|ref|YP_686964.1| 30S ribosomal protein S4P [uncultured methanogenic archaeon RC-I]
 gi|121685291|sp|Q0W1V5|RS4_UNCMA RecName: Full=30S ribosomal protein S4P
 gi|110622360|emb|CAJ37638.1| 30S ribosomal protein S4P [uncultured methanogenic archaeon RC-I]
          Length = 205

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +   I KE  +     +  +   +E RL TI+YR  F  +I  ARQF+ H H+ +NGR +
Sbjct: 85  QTLGILKEDAKLEDVLALKVDDIMERRLQTIIYRKGFANSIKQARQFIVHGHISLNGRKI 144

Query: 129 NIGSYRC 135
            +  Y  
Sbjct: 145 TVPGYLV 151


>gi|171690318|ref|XP_001910084.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945107|emb|CAP71218.1| unnamed protein product [Podospora anserina S mat+]
          Length = 449

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           E RLD  V+RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V  +   +A
Sbjct: 135 ERRLDISVFRALFASSARQARQFVIHGAVKVNGKKMQHPGYLLNPGDLFQVDPEKVMIA 193


>gi|126952015|gb|ABO28119.1| ribosomal protein S4 [Casimiroa edulis]
 gi|126952167|gb|ABO28193.1| ribosomal protein S4 [Zanthoxylum monophyllum]
          Length = 58

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|126952160|gb|ABO28190.1| ribosomal protein S4 [Toddalia asiatica]
          Length = 58

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRFGKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|261279037|gb|ACX61702.1| ribosomal protein S4 [Metzgeria furcata]
          Length = 66

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P    +    ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGALPGLTNKTPQLKTNS---INQSISNKKISQYRIRLEEKQKLRF 57

Query: 61 YYGDISEKKF 70
          +YG I+ ++F
Sbjct: 58 HYG-ITGQQF 66


>gi|57014001|ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum]
          Length = 349

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 21/193 (10%)

Query: 2   SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53
           ++      + K  R +  N+W R  + +  R      + +R   +  Y        +Q +
Sbjct: 1   TRYALPALRFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQSQ 60

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
             +K+  +YGD+   +     +             +   E+R D I  R  F  TI  AR
Sbjct: 61  TTRKLSLFYGDLPITEMHRGRERTSYIP------FLLNPETRSDVIPVRLHFCETIPQAR 114

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173
           Q ++HR V VN   VNI  ++   GD+I  ++   +                 YI ++ +
Sbjct: 115 QPISHRRVCVNNGMVNITHFKLSHGDIISFQENDARTRGEEIKRSF-------YIEISVE 167

Query: 174 NMVATFVRIPSSL 186
            ++  F+  P   
Sbjct: 168 KIIGKFLDHPWRR 180


>gi|126951998|gb|ABO28111.1| ribosomal protein S4 [Aegle marmelos]
 gi|126952000|gb|ABO28112.1| ribosomal protein S4 [Aeglopsis chevalieri]
 gi|126952002|gb|ABO28113.1| ribosomal protein S4 [Afraegle paniculata]
 gi|126952010|gb|ABO28117.1| ribosomal protein S4 [Balsamocitrus dawei]
 gi|126952019|gb|ABO28121.1| ribosomal protein S4 [x Citrofortunella sp. PI 539802]
 gi|126952021|gb|ABO28122.1| ribosomal protein S4 [Citropsis daweana]
 gi|126952023|gb|ABO28123.1| ribosomal protein S4 [Citropsis schweinfurthii]
 gi|126952027|gb|ABO28125.1| ribosomal protein S4 [Citrus aurantiifolia]
 gi|126952039|gb|ABO28131.1| ribosomal protein S4 [Citrus halimii]
 gi|126952041|gb|ABO28132.1| ribosomal protein S4 [Citrus hystrix]
 gi|126952043|gb|ABO28133.1| ribosomal protein S4 [Citrus ichangensis]
 gi|126952045|gb|ABO28134.1| ribosomal protein S4 [Citrus indica]
 gi|126952047|gb|ABO28135.1| ribosomal protein S4 [Citrus jambhiri]
 gi|126952049|gb|ABO28136.1| ribosomal protein S4 [Citrus junos]
 gi|126952051|gb|ABO28137.1| ribosomal protein S4 [Citrus latifolia]
 gi|126952059|gb|ABO28140.1| ribosomal protein S4 [x Citrofortunella microcarpa]
 gi|126952061|gb|ABO28141.1| ribosomal protein S4 [Citrus maxima]
 gi|126952065|gb|ABO28143.1| ribosomal protein S4 [Citrus medica]
 gi|126952076|gb|ABO28148.1| ribosomal protein S4 [Citrus reticulata]
 gi|126952082|gb|ABO28151.1| ribosomal protein S4 [Citrus tachibana]
 gi|126952084|gb|ABO28152.1| ribosomal protein S4 [Clausena excavata]
 gi|126952086|gb|ABO28153.1| ribosomal protein S4 [Clausena harmandiana]
 gi|126952088|gb|ABO28154.1| ribosomal protein S4 [Clymenia polyandra]
 gi|126952090|gb|ABO28155.1| ribosomal protein S4 [Eremocitrus glauca]
 gi|126952092|gb|ABO28156.1| ribosomal protein S4 [Limonia acidissima]
 gi|126952094|gb|ABO28157.1| ribosomal protein S4 [Feroniella oblata]
 gi|126952096|gb|ABO28158.1| ribosomal protein S4 [Flindersia australis]
 gi|126952098|gb|ABO28159.1| ribosomal protein S4 [Citrus japonica]
 gi|126952100|gb|ABO28160.1| ribosomal protein S4 [Fortunella margarita]
 gi|126952102|gb|ABO28161.1| ribosomal protein S4 [Fortunella polyandra]
 gi|126952104|gb|ABO28162.1| ribosomal protein S4 [Citrus hybrid cultivar]
 gi|126952108|gb|ABO28164.1| ribosomal protein S4 [Glycosmis sp. RJB GH06-111]
 gi|126952110|gb|ABO28165.1| ribosomal protein S4 [Glycosmis trichanthera]
 gi|126952112|gb|ABO28166.1| ribosomal protein S4 [Luvunga sp. TT 364]
 gi|126952116|gb|ABO28168.1| ribosomal protein S4 [Merrillia caloxylon]
 gi|126952118|gb|ABO28169.1| ribosomal protein S4 [Microcitrus australasica]
 gi|126952122|gb|ABO28171.1| ribosomal protein S4 [Microcitrus garrowayae]
 gi|126952126|gb|ABO28173.1| ribosomal protein S4 [Microcitrus papuana]
 gi|126952128|gb|ABO28174.1| ribosomal protein S4 [Microcitrus warburgiana]
 gi|126952132|gb|ABO28176.1| ribosomal protein S4 [Monanthocitrus cornuta]
 gi|126952138|gb|ABO28179.1| ribosomal protein S4 [Oxanthera neocaledonica]
 gi|126952140|gb|ABO28180.1| ribosomal protein S4 [Oxanthera sp. V 7758]
 gi|126952142|gb|ABO28181.1| ribosomal protein S4 [Pamburus missionis]
 gi|126952144|gb|ABO28182.1| ribosomal protein S4 [Paramignya lobata]
 gi|126952150|gb|ABO28185.1| ribosomal protein S4 [Citrus trifoliata]
 gi|126952154|gb|ABO28187.1| ribosomal protein S4 [Severinia buxifolia]
 gi|126952158|gb|ABO28189.1| ribosomal protein S4 [Swinglea glutinosa]
          Length = 58

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|320590340|gb|EFX02783.1| 30S ribosomal subunit [Grosmannia clavigera kw1407]
          Length = 450

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 2/119 (1%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86
           + +R     +    R         Q   +   K+        +         R+   T  
Sbjct: 70  MFSRRLASVVDMNPRYMAEFDGSEQAEGRGSGKQRDPSAGSPQLAPWAGTNLRTTQPTPF 129

Query: 87  NLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             ++F  +E RLD  V+R+ F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 130 MQMTFAPMERRLDIAVFRSLFASSARQARQFVVHGAVRVNGKKMVYPGYLLNPGDLFQV 188


>gi|288871915|dbj|BAI70601.1| ribosomal protein S4 [Heterosigma akashiwo]
          Length = 268

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 22/177 (12%)

Query: 1   MSKRESSKHKIDRRIGENL---WGRPKSPVNTRS-YGPGLHGQRRKSKPSYFGLQLRAKQ 56
           MS  +  + K   R+  ++   +   K      S +     G++  +   +F  QL  K 
Sbjct: 1   MSHFKKPRFKSYVRLARDIRNDFKTDKFNRLKWSTFKKIQEGKKITNFFHHFESQLTKKH 60

Query: 57  KMKKYYGD----------ISEKKFRSIFKEADRSRGDT--------SHNLISFLESRLDT 98
           ++   +G+          +  K+  + F +    +  T          N +  LE RLD 
Sbjct: 61  QLTSNFGNQRLKNLFKENLLTKQRLATFYKLQSYKFKTLIRQNAKKQINFLYLLERRLDV 120

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           I+YR  FV ++  +RQ ++H+ V VN   +   ++  K+GD+IE++   K   +  +
Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIEIQMYPKPTVNAQK 177


>gi|238489961|ref|XP_002376218.1| 30S ribosomal subunit  S4, putative [Aspergillus flavus NRRL3357]
 gi|220698606|gb|EED54946.1| 30S ribosomal subunit S4, putative [Aspergillus flavus NRRL3357]
          Length = 455

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 118 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKQMRYPGYLLNPGDLFQV 169


>gi|134045318|ref|YP_001096804.1| 30S ribosomal protein S4P [Methanococcus maripaludis C5]
 gi|172044139|sp|A4FWL4|RS4_METM5 RecName: Full=30S ribosomal protein S4P
 gi|132662943|gb|ABO34589.1| SSU ribosomal protein S4P [Methanococcus maripaludis C5]
          Length = 178

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 55/157 (35%), Gaps = 46/157 (29%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K          G   Q  K     +G  L  K+++ K      E + R+
Sbjct: 5   RRLG-------KKYDTPNHPWIGERIQSEKEISQKYG--LVNKKELWKM-----ETQLRN 50

Query: 73  IFKEADRSRGDTSH--------------------------------NLISFLESRLDTIV 100
             ++A +   DT+                                 N+ S LE RL TIV
Sbjct: 51  YRRQARKLISDTTTQGGKEAVQLFNVLKRYAILVESEPTLDHVLSLNIESILERRLQTIV 110

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
           YR     T   ARQF+ H H+ VNG+ V   +Y    
Sbjct: 111 YRKGLAKTAKQARQFIVHGHIAVNGKRVTAPAYLVSV 147


>gi|224110334|ref|XP_002333103.1| predicted protein [Populus trichocarpa]
 gi|222834886|gb|EEE73335.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 17/139 (12%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISF-LESRLDTIVYRAKFVPT 108
           +QL+  +K+  +YGD+ E           R R  TS+      LE RLD I+ R  F  T
Sbjct: 14  IQLQTTRKLSIFYGDLPE---------MHRGRERTSYIPFLLNLERRLDVILVRLHFCET 64

Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYI 168
           I  ARQ ++HR V VN R V+I   +   GD+I  ++   ++                YI
Sbjct: 65  IPQARQLISHRRVCVNNRMVSITHLKVSHGDIISFQENDARIRGEEIRRSF-------YI 117

Query: 169 SVNHDNMVATFVRIPSSLK 187
            +  D ++  F+  P   +
Sbjct: 118 EILVDKIIGKFLDHPVRRR 136


>gi|126952013|gb|ABO28118.1| ribosomal protein S4 [Burkillanthus malaccensis]
          Length = 58

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQ ++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQTLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|169763980|ref|XP_001727890.1| S4 domain containing protein [Aspergillus oryzae RIB40]
 gi|83770918|dbj|BAE61051.1| unnamed protein product [Aspergillus oryzae]
          Length = 455

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 118 LERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKQMRYPGYLLNPGDLFQV 169


>gi|48478292|ref|YP_023998.1| 30S ribosomal protein S4P [Picrophilus torridus DSM 9790]
 gi|61215561|sp|Q6KZP7|RS4_PICTO RecName: Full=30S ribosomal protein S4P
 gi|48430940|gb|AAT43805.1| small subunit ribosomal protein S4P [Picrophilus torridus DSM 9790]
          Length = 183

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 27/154 (17%)

Query: 3   KRESSKH-----KID--RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAK 55
           K  + +H     +ID  R++      + K  +            R ++  + F  Q R  
Sbjct: 10  KYSTPRHPWEKDRIDAERQLLIKYGLKNKREL-----------WRAQTILTNFRTQARTL 58

Query: 56  QKMKKYYGDISEKKFRSIFKEADRS---------RGDTSHNLISFLESRLDTIVYRAKFV 106
           Q   +Y   ++ K+F+ +  +  R              S N+   LE RL+T+VY+    
Sbjct: 59  QAKLRYNDPLAIKQFQLLIGKLSRLNLLGENATLDDVLSLNIEDILERRLETLVYKKNLA 118

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
            T+  ARQF+ H H+ VN R V I S+  ++   
Sbjct: 119 LTMKQARQFITHGHIKVNDRVVTIPSFMVEKSME 152


>gi|116754908|ref|YP_844026.1| 30S ribosomal protein S4P [Methanosaeta thermophila PT]
 gi|121694237|sp|A0B9L2|RS4_METTP RecName: Full=30S ribosomal protein S4P
 gi|116666359|gb|ABK15386.1| SSU ribosomal protein S4P [Methanosaeta thermophila PT]
          Length = 183

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 31/57 (54%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            +   LE RL T VYR     TI  ARQF+ H H+ V G+ V + SY  K GD + +
Sbjct: 99  KITDILERRLQTQVYRQGLANTIRQARQFITHGHIQVAGQRVTVPSYLVKRGDEMTI 155


>gi|15922390|ref|NP_378059.1| 30S ribosomal protein S4P [Sulfolobus tokodaii str. 7]
 gi|26399447|sp|Q96YV8|RS4_SULTO RecName: Full=30S ribosomal protein S4P
 gi|15623179|dbj|BAB67168.1| 177aa long hypothetical 30S ribosomal protein S4 [Sulfolobus
           tokodaii str. 7]
          Length = 177

 Score = 55.7 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 25/175 (14%)

Query: 10  KIDRR--IGENLWGRP--KSPVNTRSYGPGLHGQRRKSK-------PSYFGLQLRAKQKM 58
           K  RR   G    G P  +  +       G +G R K +          F  Q R+   +
Sbjct: 5   KKSRRKWEG---PGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLAL 61

Query: 59  KKYYGDISEKKF-RSIFKEADRSRGDT------SHNLISFLESRLDTIVYRAKFVPTIFA 111
                   EK+  + +++     + +         N  ++LE RL TIVY+     TI+ 
Sbjct: 62  PPAERSTREKQLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKKGLARTIYQ 121

Query: 112 ARQFVNHRHVLVNGRSVNIGSYRCKEGDV----IEVKQKSKQLASVLEASQLAER 162
           ARQ + H H+ + GR V    Y    G+            KQ     +  +  ++
Sbjct: 122 ARQLIVHGHIAIGGRRVTSPGYIVMRGEEDLIDFYPTSPFKQHPPTQQGEENVQQ 176


>gi|154293126|ref|XP_001547113.1| hypothetical protein BC1G_14515 [Botryotinia fuckeliana B05.10]
 gi|150845660|gb|EDN20853.1| hypothetical protein BC1G_14515 [Botryotinia fuckeliana B05.10]
          Length = 423

 Score = 55.7 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +E RLDT ++RA F  +   ARQFV H  V VNG+ ++   Y    GD+ +V
Sbjct: 122 IERRLDTAIFRALFASSARQARQFVVHGKVKVNGKKMSYPGYLLNPGDMFQV 173


>gi|45358883|ref|NP_988440.1| 30S ribosomal protein S4P [Methanococcus maripaludis S2]
 gi|61215572|sp|Q6LXN0|RS4_METMP RecName: Full=30S ribosomal protein S4P
 gi|45047749|emb|CAF30876.1| SSU ribosomal protein S4P (S9E) [Methanococcus maripaludis S2]
          Length = 178

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 60/169 (35%), Gaps = 46/169 (27%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K          G   Q+ K     +G  L  K+++ K      E + R+
Sbjct: 5   RRLG-------KKYDTPNHPWIGERIQKEKEISQKYG--LVNKKELWKM-----ETQLRN 50

Query: 73  IFKEADRSRGDTSH--------------------------------NLISFLESRLDTIV 100
             ++A +   DT+                                 N+ S LE RL TIV
Sbjct: 51  YRRQARKLISDTTTQGGKEAVQLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQTIV 110

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           +R     T   ARQF+ H H+ VNG+ V   +Y     +   ++  S  
Sbjct: 111 FRKGLAKTPKQARQFIVHGHIAVNGKRVTAPAYLISVAENDAIEYVSNS 159


>gi|150401523|ref|YP_001325289.1| 30S ribosomal protein S4 [Methanococcus aeolicus Nankai-3]
 gi|171460892|sp|A6UW05|RS4_META3 RecName: Full=30S ribosomal protein S4P
 gi|150014226|gb|ABR56677.1| ribosomal protein S4 [Methanococcus aeolicus Nankai-3]
          Length = 177

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 29/50 (58%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           NL S LE RL T+V+R     T   ARQF+ H H+ VNG+ +N  SY   
Sbjct: 97  NLESILERRLQTLVFRKGLANTPKQARQFIVHGHIAVNGKKINAPSYLVP 146


>gi|295311663|ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
 gi|259156791|gb|ACV96653.1| ribosomal protein S4 [Citrullus lanatus]
          Length = 355

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 74/192 (38%), Gaps = 21/192 (10%)

Query: 2   SKRESS--KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLR 53
           ++      + +  R +  N+W R  + +  R      + +R   +  Y        +QL+
Sbjct: 4   TRYALPALRFQTCRLLLGNVWNRELTIIQRRILRKLRNKKRSIKRKIYSRENLNSYIQLQ 63

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
             +K+   YGD+   +     +             +  LE+RLD I+ R  F  TI  AR
Sbjct: 64  TTRKLSLNYGDLPITEMHRGTERTSYIP------FLLNLETRLDVILVRLHFSETIPQAR 117

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHD 173
           Q ++HR V VN   V+I  ++   GD+I                +  E     YI +  +
Sbjct: 118 QLISHRRVCVNKGMVSITHFKVSHGDLI-------SFQENDARIRGEEIRRFFYIEILVE 170

Query: 174 NMVATFVRIPSS 185
            ++  F+  P  
Sbjct: 171 KIIGKFLDHPVR 182


>gi|156034805|ref|XP_001585821.1| hypothetical protein SS1G_13338 [Sclerotinia sclerotiorum 1980]
 gi|154698741|gb|EDN98479.1| hypothetical protein SS1G_13338 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 425

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +E RLDT ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 123 IERRLDTAIFRALFASSTRQARQFVVHGKVKVNGKKMPYPGYLLNPGDMFQV 174


>gi|258569883|ref|XP_002543745.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237904015|gb|EEP78416.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 467

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RLD  ++RA F  +   ARQFV H  V VNG+ +    Y    GD+ +V
Sbjct: 129 LERRLDVAIFRALFASSTRQARQFVVHGWVTVNGKKMQYPGYLLNPGDLFQV 180


>gi|282164926|ref|YP_003357311.1| 30S ribosomal protein S4P [Methanocella paludicola SANAE]
 gi|282157240|dbj|BAI62328.1| 30S ribosomal protein S4P [Methanocella paludicola SANAE]
          Length = 208

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +   + KE  +     +  +   LE +L TIV+R  +  ++  ARQF+ H HV +NGR +
Sbjct: 85  QKLGVLKEDSKLEDILALKVEDLLERQLQTIVFRKGYANSMKQARQFIVHGHVSLNGRKI 144

Query: 129 NIGSYRC 135
            + SY  
Sbjct: 145 TVPSYMV 151


>gi|126952008|gb|ABO28116.1| ribosomal protein S4 [Atalantia monophylla]
          Length = 58

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q    K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSHSVKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|283139279|gb|ADB12614.1| Rps4 [Hordelymus europaeus]
          Length = 63

 Score = 55.7 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 144 KQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
           K   +  + V      ++   +P++++++         +I          + +   LVVE
Sbjct: 1   KDNQRSKSLVQNYIASSDPGKLPKHLTIDTLEYKGLVNKILDRK---WVGLKINELLVVE 57

Query: 203 FYSR 206
           +YSR
Sbjct: 58  YYSR 61


>gi|70605931|ref|YP_254801.1| 30S ribosomal protein S4P [Sulfolobus acidocaldarius DSM 639]
 gi|73920776|sp|P39467|RS4_SULAC RecName: Full=30S ribosomal protein S4P
 gi|68566579|gb|AAY79508.1| 30S ribosomal protein S4P [Sulfolobus acidocaldarius DSM 639]
          Length = 176

 Score = 55.3 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 64  DISEKKF-RSIFKEADRSRGDTSHNLI------SFLESRLDTIVYRAKFVPTIFAARQFV 116
           +I EK+  + +++     + +++ + I      ++LE RL TIVY+     TI+ ARQ +
Sbjct: 67  NIREKQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLI 126

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDV 140
            H H+ ++GR V    Y    G+ 
Sbjct: 127 THGHIAISGRKVTSPGYVVLRGEE 150


>gi|328850294|gb|EGF99460.1| hypothetical protein MELLADRAFT_40240 [Melampsora larici-populina
           98AG31]
          Length = 335

 Score = 55.3 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 22/142 (15%)

Query: 27  VNTRSYGP--GLHGQRRKSKPSYFGLQLRAKQKMKKYYGD-ISEKKFRSIF--------- 74
           +  R+YGP        R SK  Y+  + +++   + Y+GD I EKKF+  +         
Sbjct: 27  LFQRTYGPESKETNFTRTSKTVYW-QRCKSRAVTRAYHGDWIQEKKFKRHYLPASLPKLS 85

Query: 75  ----KEADRSRGDTSHNLISFL-----ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNG 125
               ++ ++S    S   ++ +     E RLD +++R+ F  +++ AR+ V H  V +NG
Sbjct: 86  IQPYQKINKSNPQESKVPLAAMMYTEVERRLDVVLFRSCFADSVYEARRMVLHNAVKLNG 145

Query: 126 RSVNIGSYRCKEGDVIEVKQKS 147
                   R   GD+I V   S
Sbjct: 146 VRCIAPWTRLHPGDMITVHPAS 167


>gi|283139281|gb|ADB12615.1| Rps4 [Hordelymus europaeus]
          Length = 63

 Score = 55.3 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 144 KQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVE 202
           K   +    V      ++   +P++++++         +I          + +   LVVE
Sbjct: 1   KDNQRSKGLVQNYIASSDLGKLPKHLTIDTLEYKGLVNKILDRK---WVGLKINELLVVE 57

Query: 203 FYSR 206
           +YSR
Sbjct: 58  YYSR 61


>gi|126952025|gb|ABO28124.1| ribosomal protein S4 [Citrus sp. 'amboinensis']
 gi|126952031|gb|ABO28127.1| ribosomal protein S4 [Citrus aurantium]
 gi|126952033|gb|ABO28128.1| ribosomal protein S4 [Citrus bergamia]
 gi|126952035|gb|ABO28129.1| ribosomal protein S4 [Citrus celebica]
 gi|126952063|gb|ABO28142.1| ribosomal protein S4 [Citrus maxima]
 gi|126952067|gb|ABO28144.1| ribosomal protein S4 [Citrus myrtifolia]
 gi|126952071|gb|ABO28146.1| ribosomal protein S4 [Citrus x paradisi]
 gi|126952080|gb|ABO28150.1| ribosomal protein S4 [Citrus sinensis]
          Length = 58

 Score = 55.3 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|150402490|ref|YP_001329784.1| 30S ribosomal protein S4P [Methanococcus maripaludis C7]
 gi|171472890|sp|A6VGQ7|RS4_METM7 RecName: Full=30S ribosomal protein S4P
 gi|150033520|gb|ABR65633.1| ribosomal protein S4 [Methanococcus maripaludis C7]
          Length = 178

 Score = 55.3 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 55/157 (35%), Gaps = 46/157 (29%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           RR+G       K          G   Q  +     +G  L  K+++ K      E + R+
Sbjct: 5   RRLG-------KKYDTPNHPWIGERIQSEREISQKYG--LVNKKELWKM-----ETQLRN 50

Query: 73  IFKEADRSRGDTSH--------------------------------NLISFLESRLDTIV 100
             ++A +   DT+                                 N+ S LE RL T+V
Sbjct: 51  YRRQARKLISDTTTQGGKEAVQLFNVLKRYAILVEQEPTLDHVLSLNIESILERRLQTMV 110

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
           Y+     T   ARQF+ H H+ VNG+ V   SY    
Sbjct: 111 YKKGLAKTAKQARQFIVHGHIAVNGKRVTSPSYLVSV 147


>gi|150399382|ref|YP_001323149.1| 30S ribosomal protein S4P [Methanococcus vannielii SB]
 gi|171460838|sp|A6UPW5|RS4_METVS RecName: Full=30S ribosomal protein S4P
 gi|150012085|gb|ABR54537.1| ribosomal protein S4 [Methanococcus vannielii SB]
          Length = 178

 Score = 54.9 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 39/131 (29%)

Query: 49  GLQLRAKQKMKKYYGDIS-------EKKFRSIFKEADRSRGDTSH--------------- 86
           G +++ ++++   YG ++       E + R+  ++A +   DT+                
Sbjct: 20  GERIQKEREISHKYGLVNKKELWKMETQLRNYRRQARKLISDTTTQGGKEAVQLFNVLKR 79

Query: 87  -----------------NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                            N+ S LE RL T+VYR     T   ARQ + H H+ VNGR V 
Sbjct: 80  YAILVEQEPTLDHILSLNIESILERRLQTLVYRKGLAKTAKQARQLIVHGHIAVNGRRVT 139

Query: 130 IGSYRCKEGDV 140
             SY     + 
Sbjct: 140 SPSYLVSVSEN 150


>gi|255721325|ref|XP_002545597.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136086|gb|EER35639.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 461

 Score = 54.9 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 27/154 (17%)

Query: 41  RKSKPSYFGLQLRA-----KQKMKKYYG-DISEKKFRS-IFKEADRSRGD---------- 83
           RK   SYFG  L       K + +KY+G  + EK F++ +F +  ++             
Sbjct: 30  RKDPLSYFGKTLYQQKWAAKSETRKYHGEHLREKHFKNVLFDKDLKTYSQLDASLKGRDV 89

Query: 84  ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
                +      LE RL+  ++R+ F  ++  ARQF+    V VNG  +   S+  + GD
Sbjct: 90  APTPITLQTFGTLEKRLEVALFRSMFASSLRQARQFILGGFVKVNGVVMKYPSFPLQSGD 149

Query: 140 VIEVKQKS------KQLASVLEASQLAERDVPEY 167
           V  V  +       K   S+ +A  +  + +  +
Sbjct: 150 VFSVDPEKVLYALGKDKPSLEKALSVDRKQIKSW 183


>gi|159905736|ref|YP_001549398.1| 30S ribosomal protein S4 [Methanococcus maripaludis C6]
 gi|226699087|sp|A9A9Z3|RS4_METM6 RecName: Full=30S ribosomal protein S4P
 gi|159887229|gb|ABX02166.1| ribosomal protein S4 [Methanococcus maripaludis C6]
          Length = 178

 Score = 54.9 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 25/47 (53%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            LE RL TIVYR     T   ARQF+ H H+ VNG+ V   +Y    
Sbjct: 101 ILERRLQTIVYRKGLAKTAKQARQFIVHGHIAVNGKRVTAPAYLVSV 147


>gi|156936976|ref|YP_001434772.1| 30S ribosomal protein S4P [Ignicoccus hospitalis KIN4/I]
 gi|172044459|sp|A8A8W3|RS4_IGNH4 RecName: Full=30S ribosomal protein S4P
 gi|156565960|gb|ABU81365.1| SSU ribosomal protein S4P [Ignicoccus hospitalis KIN4/I]
          Length = 166

 Score = 54.5 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
             LE RL T+VY+     +I+ ARQ V H H+ +NGR V    Y  +  + 
Sbjct: 99  DLLERRLQTVVYKKGLAKSIYHARQLVTHGHIAINGRRVTSPGYIVRRDEE 149


>gi|224799244|gb|ACN63087.1| ribosomal protein S4 [Cornus nuttallii]
          Length = 65

 Score = 54.5 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G  L  Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKRSQYRIRLEEKQKLRX 56

Query: 61 YYG 63
          + G
Sbjct: 57 HXG 59


>gi|21228258|ref|NP_634180.1| 30S ribosomal protein S4P [Methanosarcina mazei Go1]
 gi|26399388|sp|Q8PV18|RS4_METMA RecName: Full=30S ribosomal protein S4P
 gi|20906715|gb|AAM31852.1| SSU ribosomal protein S4P [Methanosarcina mazei Go1]
          Length = 219

 Score = 54.5 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 6/122 (4%)

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQF 115
           +Y   SE+    + +           +++S      LE RL T V R     T+  ARQF
Sbjct: 74  HYATQSEEILSKLIRYGIIKADANVDDILSLKTENILERRLQTQVLRLGLARTVIQARQF 133

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNM 175
           + H H+ +NGR   I      + D + +         + E+       V  +++ +   +
Sbjct: 134 ITHGHIAINGRKATIPGMLVSKEDEMHI-GYYGSSPLMSESHSERPVQVASFLADSATTL 192

Query: 176 VA 177
            A
Sbjct: 193 KA 194


>gi|321268723|gb|ADW79172.1| ribosomal protein S4 [Cyanophora paradoxa]
          Length = 447

 Score = 54.5 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 10/124 (8%)

Query: 48  FGLQLRAKQKMKKYYGDISEKKFRSI-----FKEADRSRGDTSHNLISF-----LESRLD 97
           F ++L  K+  K +Y +++E + +       ++   + +   S N         LESRLD
Sbjct: 48  FNMKLYIKKIFKNFYPNLTEIQLKKYIGENIYQYLTKDKIKHSQNTQIIKIYHILESRLD 107

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEAS 157
           T++ R   V T  AARQ + H++V V+ R +    Y    G +I +K+ +     +   +
Sbjct: 108 TMLIRTNLVKTPKAARQLIMHKNVFVDNRLITNPGYLLSNGQIIHIKKINIVYLKIKINN 167

Query: 158 QLAE 161
           +  E
Sbjct: 168 KNNE 171


>gi|154151763|ref|YP_001405381.1| 30S ribosomal protein S4P [Candidatus Methanoregula boonei 6A8]
 gi|171769717|sp|A7IAH7|RS4_METB6 RecName: Full=30S ribosomal protein S4P
 gi|154000315|gb|ABS56738.1| ribosomal protein S4 [Methanoregula boonei 6A8]
          Length = 185

 Score = 54.5 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 29/63 (46%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
            + + LE RL T+VYR     +   ARQ V H H+ + GR V +  Y    G+   +   
Sbjct: 101 KVPAQLERRLQTLVYRKGLARSPKQARQLVTHGHIAIGGRRVTVPGYLVTRGEETTISYA 160

Query: 147 SKQ 149
            K 
Sbjct: 161 GKS 163


>gi|330506854|ref|YP_004383282.1| 30S ribosomal protein S4 [Methanosaeta concilii GP-6]
 gi|328927662|gb|AEB67464.1| ribosomal protein S4 [Methanosaeta concilii GP-6]
          Length = 178

 Score = 54.5 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 34/72 (47%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RL T VYR     ++  ARQF+ H H+ V+GR V++  Y    G+ + +        
Sbjct: 102 LERRLQTQVYRQGLANSLKQARQFIVHGHIQVSGRRVDVPGYLVPRGEEMSIDYYMGSPM 161

Query: 152 SVLEASQLAERD 163
           +     + A R 
Sbjct: 162 ASEGHPERASRT 173


>gi|629415|pir||S47021 ribosomal protein S4 - Sulfolobus acidocaldarius
 gi|517288|emb|CAA56478.1| ribosomal protein S4 [Sulfolobus acidocaldarius]
          Length = 160

 Score = 54.5 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 64  DISEKKF-RSIFKEADRSRGDTSHNLI------SFLESRLDTIVYRAKFVPTIFAARQFV 116
           +I EK+  + +++     + +++ + I      ++LE RL TIVY+     TI+ ARQ +
Sbjct: 56  NIREKQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLI 115

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDV 140
            H H+ ++GR V    Y    G+ 
Sbjct: 116 THGHIAISGRKVTSPGYVVLRGEE 139


>gi|126952078|gb|ABO28149.1| ribosomal protein S4 [Citrus reticulata]
          Length = 58

 Score = 54.5 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + +++  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRIEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|126952134|gb|ABO28177.1| ribosomal protein S4 [Murraya paniculata]
          Length = 58

 Score = 54.5 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61 Y 61
          +
Sbjct: 57 H 57


>gi|110668836|ref|YP_658647.1| 30S ribosomal protein S4P [Haloquadratum walsbyi DSM 16790]
 gi|121687159|sp|Q18G54|RS4_HALWD RecName: Full=30S ribosomal protein S4P
 gi|109626583|emb|CAJ53047.1| ribosomal protein S4 [Haloquadratum walsbyi DSM 16790]
          Length = 175

 Score = 54.5 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 28/55 (50%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
             ++   LE RL TIVYR     T   ARQF+ H H+ VNG  V   S   +E +
Sbjct: 96  GLDVSDILERRLQTIVYRQGLASTPKQARQFIVHEHITVNGARVTRPSKMVEETE 150


>gi|261279051|gb|ACX61709.1| ribosomal protein S4 [Tortella tortuosa]
          Length = 64

 Score = 54.5 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P    S    L+  ++    S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLSNKTPHLKSSSTNQLNSNKK---ISQYRIRLEEKQKLRF 57

Query: 61 YYG 63
          +YG
Sbjct: 58 HYG 60


>gi|126952114|gb|ABO28167.1| ribosomal protein S4 [Merope angulata]
 gi|126952148|gb|ABO28184.1| ribosomal protein S4 [Pleiospermium latialatum]
          Length = 58

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSYFRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|20089978|ref|NP_616053.1| 30S ribosomal protein S4P [Methanosarcina acetivorans C2A]
 gi|26399405|sp|Q8TRR1|RS4_METAC RecName: Full=30S ribosomal protein S4P
 gi|19914941|gb|AAM04533.1| ribosomal protein S4p [Methanosarcina acetivorans C2A]
          Length = 218

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 61  YYGDISEKKFRSIFKEADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQF 115
           +Y   SE+    + +           +++S      LE RL T V R     T+  ARQF
Sbjct: 73  HYRTQSEEILSKLIRYGIIKSDANIDDILSLKTENILERRLQTQVLRLGLARTVIQARQF 132

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164
           + H H+ +NGR   I      + D + +          L+     ER V
Sbjct: 133 ITHGHIAINGRKATIPGMLVSKEDEMHIGYYGNSP---LKNESHPERPV 178


>gi|6172228|dbj|BAA85896.1| ribosomal protein HS4 [Halobacterium salinarum]
          Length = 169

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 34/72 (47%)

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +   I  E +R     S  +   LE RL T+VYR     T+  ARQFV+H HV V+G  V
Sbjct: 74  QRIGILSEEERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHGHVTVDGSRV 133

Query: 129 NIGSYRCKEGDV 140
              SY     + 
Sbjct: 134 TEPSYTVPVSEE 145


>gi|298674773|ref|YP_003726523.1| 30S ribosomal protein S4 [Methanohalobium evestigatum Z-7303]
 gi|298287761|gb|ADI73727.1| ribosomal protein S4 [Methanohalobium evestigatum Z-7303]
          Length = 184

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            LE RL T V++     T+  ARQF+ H H+ VNGR V + S    + + + +
Sbjct: 105 ILERRLQTQVHKLGLARTLLQARQFITHGHIAVNGRKVTVPSKMITKDEEMTI 157


>gi|289191582|ref|YP_003457523.1| ribosomal protein S4 [Methanocaldococcus sp. FS406-22]
 gi|288938032|gb|ADC68787.1| ribosomal protein S4 [Methanocaldococcus sp. FS406-22]
          Length = 186

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 14/131 (10%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76
           K  +         +G RRK +       LR  +++ ++   D +E+      +  ++ K+
Sbjct: 21  KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLKK 80

Query: 77  --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
               +    T  +++S      LE RL T+V+R     T   ARQ + H H+ VNGR V 
Sbjct: 81  YGILKVENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVT 140

Query: 130 IGSYRCKEGDV 140
             SY     + 
Sbjct: 141 APSYMVTVEEE 151


>gi|126952136|gb|ABO28178.1| ribosomal protein S4 [Naringi crenulata]
          Length = 58

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+      K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPCFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|15790214|ref|NP_280038.1| 30S ribosomal protein S4P [Halobacterium sp. NRC-1]
 gi|169235943|ref|YP_001689143.1| 30S ribosomal protein S4P [Halobacterium salinarum R1]
 gi|26399499|sp|Q9HQJ6|RS4_HALSA RecName: Full=30S ribosomal protein S4P
 gi|226699070|sp|B0R4Y0|RS4_HALS3 RecName: Full=30S ribosomal protein S4P
 gi|10580672|gb|AAG19518.1| 30S ribosomal protein S4P [Halobacterium sp. NRC-1]
 gi|167727009|emb|CAP13795.1| ribosomal protein S4 [Halobacterium salinarum R1]
          Length = 170

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 34/72 (47%)

Query: 69  KFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +   I  E +R     S  +   LE RL T+VYR     T+  ARQFV+H HV V+G  V
Sbjct: 75  QRIGILSEEERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHGHVTVDGSRV 134

Query: 129 NIGSYRCKEGDV 140
              SY     + 
Sbjct: 135 TEPSYTVPVSEE 146


>gi|242223228|ref|XP_002477270.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723290|gb|EED77530.1| predicted protein [Postia placenta Mad-698-R]
          Length = 345

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 41/86 (47%)

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
           + +  E ++        +   +E R+D +++RA F  +++ AR+ V H  VL+NG+    
Sbjct: 112 KRLQNEREKGLAPVGSLMFREVERRIDVLLFRACFAHSVYEARRMVVHGDVLLNGKKHTN 171

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLEA 156
            + R   GD+  V  K+ +      A
Sbjct: 172 PNTRLAPGDMFSVDPKAIRFLQANAA 197


>gi|15668362|ref|NP_247158.1| 30S ribosomal protein S4P [Methanocaldococcus jannaschii DSM 2661]
 gi|1710769|sp|P54020|RS4_METJA RecName: Full=30S ribosomal protein S4P
 gi|1498964|gb|AAB98170.1| SSU ribosomal protein S4P (rpsD) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 187

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 14/131 (10%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76
           K  +         +G RRK +       LR  +++ ++   D +E+      +  ++ K+
Sbjct: 21  KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLKK 80

Query: 77  --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
               +    T  +++S      LE RL T+V+R     T   ARQ + H H+ VNGR V 
Sbjct: 81  YGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVT 140

Query: 130 IGSYRCKEGDV 140
             SY     + 
Sbjct: 141 APSYMVTVEEE 151


>gi|150866939|ref|XP_001386705.2| hypothetical protein PICST_50481 [Scheffersomyces stipitis CBS
           6054]
 gi|149388195|gb|ABN68676.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 471

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 9/140 (6%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK--KFRSIFKEADRSRGDTSHNLISFLE 93
                +    +Y G  L  K + K  +    E   +  +  K +  +    +    + LE
Sbjct: 44  QKWNAKAETRAYHGEHLTEK-RWKAIFDPSLETVAQLDASLKGSKVAPTPMTLQTYASLE 102

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS------ 147
            RL+  V+R+ F  ++  AR+F+    V VNG  +   S+  K GD+  VK +       
Sbjct: 103 KRLELAVFRSMFASSVRQAREFILGGSVSVNGVVIKHPSFPLKSGDIFHVKPEKVLLAMG 162

Query: 148 KQLASVLEASQLAERDVPEY 167
           +   S+ +A ++  + +  +
Sbjct: 163 RTKPSLEKAIKVDNQQISAW 182


>gi|296109382|ref|YP_003616331.1| ribosomal protein S4 [Methanocaldococcus infernus ME]
 gi|295434196|gb|ADG13367.1| ribosomal protein S4 [Methanocaldococcus infernus ME]
          Length = 183

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 14/152 (9%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76
           K  +         +G RRK +       LR  +++ ++   D +E+      +  ++ + 
Sbjct: 21  KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDTTEQGAKEAQQLFNVLRR 80

Query: 77  --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
               R    T  ++++      LE RL T+V+R     T   ARQ + H H+ +NGR V 
Sbjct: 81  YGILRKDNPTLDDVLALTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAINGRRVT 140

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           + SY     +   +           +  + A+
Sbjct: 141 VPSYLVTVEEEDSIDYYKNSPFVNKDHPERAK 172


>gi|126952152|gb|ABO28186.1| ribosomal protein S4 [Ruta graveolens]
          Length = 58

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGSLPGLTSKRP----RAGSDFRNQSRSGKKSQYRIRLEEKQKLRF 56

Query: 61 Y 61
          +
Sbjct: 57 H 57


>gi|307352910|ref|YP_003893961.1| 30S ribosomal protein S4 [Methanoplanus petrolearius DSM 11571]
 gi|307156143|gb|ADN35523.1| ribosomal protein S4 [Methanoplanus petrolearius DSM 11571]
          Length = 182

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/45 (48%), Positives = 27/45 (60%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           LE RL TIVYR     +   ARQF+ H H+ VNGR + I  YR +
Sbjct: 106 LERRLQTIVYRKGLARSPKQARQFITHGHIAVNGRKLTIPGYRVR 150


>gi|126952006|gb|ABO28115.1| ribosomal protein S4 [Atalantia citroides]
          Length = 58

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q    K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSHSVKKSQYRIRLEEKQKLRF 56

Query: 61 Y 61
          +
Sbjct: 57 H 57


>gi|1749714|dbj|BAA13914.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 327

 Score = 53.8 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 15/127 (11%)

Query: 53  RAKQKMKKYYGD-ISEKKFRSIFKEA---------DRSRGDTSHNLISFLESRLDTIVYR 102
            AK++ + Y+G  + E + ++ F+           D+      +   +FLESRLD  ++R
Sbjct: 45  NAKKETRSYHGPQLREYQLKNAFRPKLEGVISSLDDKLPIPFMNQTYAFLESRLDMSIHR 104

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           A F      AR  V H  V V+G+           GD++ V        SV+     +  
Sbjct: 105 AFFASYALQARLLVLHGKVHVDGKPERRAYRPLLPGDLVTV-----DQKSVMNCVSASSN 159

Query: 163 DVPEYIS 169
           + P  + 
Sbjct: 160 NTPSILE 166


>gi|296243121|ref|YP_003650608.1| 30S ribosomal protein S4P [Thermosphaera aggregans DSM 11486]
 gi|296095705|gb|ADG91656.1| SSU ribosomal protein S4P [Thermosphaera aggregans DSM 11486]
          Length = 173

 Score = 53.4 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 31/68 (45%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + KE  R     +  +   LE RL TIVY+     TI+ ARQ + H H+ V GR +    
Sbjct: 82  LLKEGSRLEDALNLKVEDLLERRLQTIVYKKGLANTIYQARQLIVHGHIAVAGRRITSPG 141

Query: 133 YRCKEGDV 140
           Y     + 
Sbjct: 142 YIVSVEEE 149


>gi|159041669|ref|YP_001540921.1| 30S ribosomal protein S4P [Caldivirga maquilingensis IC-167]
 gi|189045367|sp|A8MDS5|RS4_CALMQ RecName: Full=30S ribosomal protein S4P
 gi|157920504|gb|ABW01931.1| ribosomal protein S4 [Caldivirga maquilingensis IC-167]
          Length = 181

 Score = 53.4 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 23/47 (48%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           LE RL T+VYR     +I  ARQ + H H+ +NG  V    Y     
Sbjct: 104 LERRLQTLVYRKGMARSIHEARQLIVHGHISINGVRVRSPGYLVPRN 150


>gi|50425337|ref|XP_461262.1| DEHA2F20988p [Debaryomyces hansenii CBS767]
 gi|49656931|emb|CAG89651.1| DEHA2F20988p [Debaryomyces hansenii]
          Length = 467

 Score = 53.4 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           LE RL+  ++RA F  ++  ARQF+   HV VNG  V   S+  + GDV  VK +   LA
Sbjct: 101 LEKRLEFALFRAMFASSVRQARQFILGGHVKVNGVVVKHPSFPLQSGDVFNVKPEKVLLA 160

Query: 152 S 152
            
Sbjct: 161 M 161


>gi|126952037|gb|ABO28130.1| ribosomal protein S4 [Citrus gracilis]
          Length = 59

 Score = 53.4 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  K K+  
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKTKIAF 56

Query: 61 YY 62
           +
Sbjct: 57 SF 58


>gi|124486066|ref|YP_001030682.1| 30S ribosomal protein S4P [Methanocorpusculum labreanum Z]
 gi|152112228|sp|A2SSV9|RS4_METLZ RecName: Full=30S ribosomal protein S4P
 gi|124363607|gb|ABN07415.1| SSU ribosomal protein S4P [Methanocorpusculum labreanum Z]
          Length = 181

 Score = 53.4 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             LE RL TIVYR     +   ARQ + H H+ +NG+ V++ SY     +   +   +  
Sbjct: 104 DILERRLQTIVYRKGLARSPKQARQLITHGHIAINGQRVSVPSYMVSIAEEAGIMYYATS 163


>gi|91772119|ref|YP_564811.1| 30S ribosomal protein S4 [Methanococcoides burtonii DSM 6242]
 gi|121689437|sp|Q12ZR5|RS4_METBU RecName: Full=30S ribosomal protein S4P
 gi|91711134|gb|ABE51061.1| SSU ribosomal protein S4P [Methanococcoides burtonii DSM 6242]
          Length = 184

 Score = 53.4 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
                + LE RL T V+R     T   ARQF+ H H+ ++G+ V +          + V
Sbjct: 99  GLQTEAILERRLQTQVHRLGLARTARQARQFITHGHIAIDGKRVTVPGMMVTREQEMNV 157


>gi|327400270|ref|YP_004341109.1| 30S ribosomal protein S4 [Archaeoglobus veneficus SNP6]
 gi|327315778|gb|AEA46394.1| ribosomal protein S4 [Archaeoglobus veneficus SNP6]
          Length = 179

 Score = 53.4 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 34/74 (45%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            FLE RL T+VYR     TI  ARQ + H H+ V+GR V    Y  ++ +   +      
Sbjct: 105 DFLERRLQTMVYRQGLANTIKQARQLIVHGHIAVDGRRVTAPGYIVEKDEESRITYYRNS 164

Query: 150 LASVLEASQLAERD 163
             +  E    AE +
Sbjct: 165 PFAKRELVAKAEAE 178


>gi|73667629|ref|YP_303644.1| 30S ribosomal protein S4P [Methanosarcina barkeri str. Fusaro]
 gi|90101692|sp|Q46GC8|RS4_METBF RecName: Full=30S ribosomal protein S4P
 gi|72394791|gb|AAZ69064.1| SSU ribosomal protein S4P [Methanosarcina barkeri str. Fusaro]
          Length = 216

 Score = 53.0 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           + LE RL T V R     T+  ARQF+ H H+ +NGR   +      + D + +   +  
Sbjct: 107 NILERRLQTQVLRLGLARTVVQARQFITHGHIAINGRKATVPGMLVSKEDEMHIGYYATS 166


>gi|256810445|ref|YP_003127814.1| ribosomal protein S4 [Methanocaldococcus fervens AG86]
 gi|256793645|gb|ACV24314.1| ribosomal protein S4 [Methanocaldococcus fervens AG86]
          Length = 184

 Score = 53.0 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 14/140 (10%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76
           K  +         +G RRK +       LR  +++ ++   D +E+      +  ++ K+
Sbjct: 21  KERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLKK 80

Query: 77  --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
               +    T  +++S      LE RL T+V+R     T   ARQ + H H+ VNGR V 
Sbjct: 81  YNILKVENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVT 140

Query: 130 IGSYRCKEGDVIEVKQKSKQ 149
             SY     +  ++      
Sbjct: 141 APSYLVTVEEEDKITYAKNS 160


>gi|303244310|ref|ZP_07330647.1| ribosomal protein S4 [Methanothermococcus okinawensis IH1]
 gi|302485437|gb|EFL48364.1| ribosomal protein S4 [Methanothermococcus okinawensis IH1]
          Length = 177

 Score = 53.0 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 32/68 (47%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + KE        S N+ S L  RL T+V+R     T   ARQF+ H H+ VNGR V   S
Sbjct: 83  LIKEDASLDDVLSLNVESILNRRLQTLVFRKGLAKTPKQARQFIVHGHIAVNGRRVTSPS 142

Query: 133 YRCKEGDV 140
           Y     + 
Sbjct: 143 YLVPSDEE 150


>gi|310796626|gb|EFQ32087.1| S4 domain-containing protein [Glomerella graminicola M1.001]
          Length = 539

 Score = 53.0 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           LE RLD  ++RA F  +   A+QF  H  V VNG+ +  G+Y+   GD+ +V   S
Sbjct: 172 LERRLDVAIFRAMFASSTLQAKQFCTHGAVKVNGKPMRYGAYKLNPGDMFQVDIDS 227


>gi|302423224|ref|XP_003009442.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261352588|gb|EEY15016.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 470

 Score = 53.0 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 28/52 (53%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE RL+  ++RA F  +   ARQF  H  V VNG+ +    Y    GD+ +V
Sbjct: 152 LERRLEVAIFRAMFASSTLQARQFCIHGAVRVNGQLMRSPGYLLNPGDMFQV 203


>gi|260944778|ref|XP_002616687.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720]
 gi|238850336|gb|EEQ39800.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720]
          Length = 468

 Score = 53.0 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 8/160 (5%)

Query: 18  NLWGRPKSPVNTRSYGP--GLHGQRRKSKPSYFGLQLRAKQ-KMKKYYGDISEKKFRSIF 74
           NL+   K P                ++   +Y G  L  ++ K        S  +  +  
Sbjct: 24  NLFNLYKKPQIRYQGKSLFQQKWTAKQETRAYHGEHLTERRWKTLFNPSLESVAQLDASL 83

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           K  D +         + LE RL+  ++R+ F  ++  AR+F+ + HV VNG ++   ++ 
Sbjct: 84  KGVDVAPTPMPLQTFAALEKRLEFALFRSMFASSVRQAREFIKNGHVKVNGVTIKHPAFP 143

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDN 174
            K GD+      S     V+ A    +  V E I V+   
Sbjct: 144 LKSGDIF-----SVNPEKVMLAMGRVKPSVAEAIKVDKKQ 178


>gi|76096797|gb|ABA39285.1| ribosomal protein S4-like [Microsorum vieillardii]
          Length = 78

 Score = 52.6 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 7/80 (8%)

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISV---NHDNMVATFVRIPSSL 186
           I SYRCK  D+I V+ +     ++       ++  P+++++     D        I    
Sbjct: 1   IPSYRCKPKDIITVRNRPTSYNALRNKFTRGDKT-PDHLAISLSEDDKPTGLVNCI---A 56

Query: 187 KDVPYPVIMQPNLVVEFYSR 206
                 + +   LVVE+YSR
Sbjct: 57  NRESVNLNINELLVVEYYSR 76


>gi|241958516|ref|XP_002421977.1| mitochondrial ribosome protein precursor, small subunit [Candida
           dubliniensis CD36]
 gi|223645322|emb|CAX39978.1| mitochondrial ribosome protein precursor, small subunit [Candida
           dubliniensis CD36]
          Length = 461

 Score = 52.6 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 27/154 (17%)

Query: 41  RKSKPSYFGLQLRA-----KQKMKKYYGD-ISEKKFRS-IFKEADRSRGD---------- 83
           RK    YFG  L       K + + Y+G  I EK+F++ +F    ++             
Sbjct: 30  RKDPLQYFGKTLYQQKWAAKTETRNYHGQQIKEKRFKNVLFDSNLKTYSQLDASLKGHDV 89

Query: 84  ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
                +      LE RL+  ++R+ F  ++  ARQF+   +V VNG  +   S+  + GD
Sbjct: 90  APTPITLQTYGTLEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGD 149

Query: 140 VIEVKQKS------KQLASVLEASQLAERDVPEY 167
           V  V  +       K   S+ +A  + ++ + ++
Sbjct: 150 VFSVDPEKVLFALGKTKPSLEKALSVDKKQIKKW 183


>gi|292559479|ref|YP_003540847.1| ribosomal protein S4 [Hartmannella vermiformis]
 gi|290775732|gb|ADD62231.1| ribosomal protein S4 [Hartmannella vermiformis]
          Length = 230

 Score = 52.6 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%)

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
           + Q +K +Y  IS+++     K +  S G    N +  +ESR+ TI+YR  ++P I    
Sbjct: 77  SMQLVKLFYKGISQRRVYKFSKLSSASFGLWVDNFLLLIESRVSTILYRVNWIPNILFLN 136

Query: 114 QFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER----DVPEYIS 169
           QF+ H  +L++ +     ++  K   +I      +         +L       + P YI 
Sbjct: 137 QFLAHGDILIDSKVPTTVNFMVKMFQLIRPLPSIQSKLRFNFHLRLINNMVYFNTPRYIF 196

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQ 196
           +N   M A   R PS L D+ +PV++ 
Sbjct: 197 MNSKIMFACIFRNPS-LSDISFPVLLD 222


>gi|222480229|ref|YP_002566466.1| ribosomal protein S4 [Halorubrum lacusprofundi ATCC 49239]
 gi|222453131|gb|ACM57396.1| ribosomal protein S4 [Halorubrum lacusprofundi ATCC 49239]
          Length = 175

 Score = 52.6 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 26/53 (49%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +   LE RL T+ YR  F  +   ARQF+ H H+ V+G  V   S +    D 
Sbjct: 99  VTDLLERRLQTVAYRQGFASSTQQARQFIVHGHITVDGARVTRPSVKVDVDDE 151


>gi|68476945|ref|XP_717450.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|68477136|ref|XP_717361.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|46439070|gb|EAK98392.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|46439163|gb|EAK98484.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
          Length = 461

 Score = 52.6 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%)

Query: 41  RKSKPSYFGLQLRA-----KQKMKKYYGD-ISEKKFRS-IFKEADRSRGD---------- 83
           RK    YFG  L       K + + Y+G  I EK+F++ +F    ++             
Sbjct: 30  RKDPLQYFGKTLYQQKWAAKTETRNYHGQQIKEKRFKNVLFDSNLKTYSQLDASLKGHDV 89

Query: 84  ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
                +      LE RL+  ++R+ F  ++  ARQF+   +V VNG  +   S+  + GD
Sbjct: 90  APTPITLQTYGTLEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGD 149

Query: 140 VIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
           V      S     VL A    +  + + +SV+   + 
Sbjct: 150 VF-----SVDPEKVLFALGKTKPSLEKALSVDKKQIK 181


>gi|327311847|ref|YP_004338744.1| 30S ribosomal protein S4 [Thermoproteus uzoniensis 768-20]
 gi|326948326|gb|AEA13432.1| ribosomal protein S4 [Thermoproteus uzoniensis 768-20]
          Length = 171

 Score = 52.6 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 25/46 (54%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            LE RL TIVYR  F  T + ARQ + H H+ +NGR V    +   
Sbjct: 103 ILERRLQTIVYRKGFAKTPYQARQLITHGHIAINGRRVRSPGFLVP 148


>gi|238879875|gb|EEQ43513.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 461

 Score = 52.6 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%)

Query: 41  RKSKPSYFGLQLRA-----KQKMKKYYGD-ISEKKFRS-IFKEADRSRGD---------- 83
           RK    YFG  L       K + + Y+G  I EK+F++ +F    ++             
Sbjct: 30  RKDPLQYFGKTLYQQKWAAKTETRNYHGQQIKEKRFKNVLFDSNLKTYSQLDASLKGHDV 89

Query: 84  ----TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
                +      LE RL+  ++R+ F  ++  ARQF+   +V VNG  +   S+  + GD
Sbjct: 90  APTPITLQTYGTLEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGD 149

Query: 140 VIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMV 176
           V      S     VL A    +  + + +SV+   + 
Sbjct: 150 VF-----SVDPEKVLFALGKTKPSLEKALSVDKKQIK 181


>gi|11499865|ref|NP_071109.1| 30S ribosomal protein S4 [Archaeoglobus fulgidus DSM 4304]
 gi|3914900|sp|O28000|RS4_ARCFU RecName: Full=30S ribosomal protein S4P
 gi|2648246|gb|AAB88980.1| SSU ribosomal protein S4P (rps4P) [Archaeoglobus fulgidus DSM 4304]
          Length = 172

 Score = 52.2 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 27/47 (57%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T+VYR     TI  ARQF+ H H+ V+GR V   S+   
Sbjct: 105 DFLERRLQTMVYRQGLARTIKQARQFITHGHIAVDGRRVTSPSFIVT 151


>gi|126952130|gb|ABO28175.1| ribosomal protein S4 [Micromelum minutum]
          Length = 58

 Score = 52.2 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    +    RR+G       K P      G     Q R  K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRFIKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLRF 56

Query: 61 YY 62
          +Y
Sbjct: 57 HY 58


>gi|197941028|gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana]
          Length = 362

 Score = 52.2 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QL+  +K+  +YGD+   +     K             +  LE+R D I+ R  F+ TI
Sbjct: 67  IQLQTTRKLSLFYGDLPITEMHRGTKRTSYIP------FLLNLETRFDVILLRLHFLETI 120

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V VN   V+I  ++   GD+I  ++ 
Sbjct: 121 PQARQLISHRRVCVNKGMVSITHFKLSHGDIISFQEN 157


>gi|297527614|ref|YP_003669638.1| ribosomal protein S4 [Staphylothermus hellenicus DSM 12710]
 gi|297256530|gb|ADI32739.1| ribosomal protein S4 [Staphylothermus hellenicus DSM 12710]
          Length = 168

 Score = 52.2 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 27/64 (42%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           +  E           +   LE RL TIVY+     TI+ ARQ + H H+ + GR V    
Sbjct: 82  LLHENATLEDVLGLTVEDLLERRLQTIVYKKGLARTIYHARQLIVHGHIAIAGRRVTSPG 141

Query: 133 YRCK 136
           Y   
Sbjct: 142 YIVS 145


>gi|126952004|gb|ABO28114.1| ribosomal protein S4 [Atalantia ceylanica]
          Length = 57

 Score = 51.9 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK+  
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEEKQKLVF 56

Query: 61 Y 61
           
Sbjct: 57 I 57


>gi|58699943|ref|ZP_00374527.1| ribosomal protein S4 [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533543|gb|EAL57958.1| ribosomal protein S4 [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 45

 Score = 51.9 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           ER  P+Y+  +       ++R P    +VPY   M+ NLVVEFYSR
Sbjct: 1   ERKAPDYLEADSKEHSVKYLRSPQ-YSEVPYSADMEVNLVVEFYSR 45


>gi|119719176|ref|YP_919671.1| 30S ribosomal protein S4P [Thermofilum pendens Hrk 5]
 gi|152112271|sp|A1RWT8|RS4_THEPD RecName: Full=30S ribosomal protein S4P
 gi|119524296|gb|ABL77668.1| SSU ribosomal protein S4P [Thermofilum pendens Hrk 5]
          Length = 172

 Score = 51.9 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 24/49 (48%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           LE RL TIVYR     TI  ARQ + H H+ VN R V    Y     + 
Sbjct: 102 LERRLQTIVYRKGLATTIRHARQLITHGHIAVNSRRVRSPGYLVSRDEE 150


>gi|224365672|ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera]
 gi|209954196|emb|CAQ77661.1| ribosomal protein S4 [Vitis vinifera]
 gi|239764730|gb|ACS15201.1| ribosomal protein S4 [Vitis vinifera]
          Length = 362

 Score = 51.9 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 22/164 (13%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y                 +Q +  +K+  ++GD+   +          + 
Sbjct: 48  NKKRSIKRKIYP---------RDNLNSYIQSQTTRKLPLFHGDLPITEMHR------GTE 92

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            ++       LE+R D I  R  F  TI  ARQ ++HR V VN R V+I   +   GD+I
Sbjct: 93  RNSYILFPLNLETRSDVIPVRLHFCETIPQARQPISHRRVCVNNRMVSITHLKVSHGDII 152

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
             ++   ++                YI ++ + ++  F+  P  
Sbjct: 153 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFLDHPVR 189


>gi|284162136|ref|YP_003400759.1| ribosomal protein S4 [Archaeoglobus profundus DSM 5631]
 gi|284012133|gb|ADB58086.1| ribosomal protein S4 [Archaeoglobus profundus DSM 5631]
          Length = 169

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 30/60 (50%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            FLE RL T+VYR     TI  ARQ + H H+ ++GR V   SY  +  +  ++      
Sbjct: 105 DFLERRLQTVVYRQGLARTIKQARQLITHGHIAIDGRRVTSPSYIVERDEETKIGFYPNS 164


>gi|332157866|ref|YP_004423145.1| 30S ribosomal protein S4 [Pyrococcus sp. NA2]
 gi|331033329|gb|AEC51141.1| 30S ribosomal protein S4 [Pyrococcus sp. NA2]
          Length = 180

 Score = 51.5 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 25/46 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             LE RL TIVYR     T+  ARQ + H H+ VNG+ +   SY  
Sbjct: 99  DILERRLQTIVYRKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLV 144


>gi|149239088|ref|XP_001525420.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450913|gb|EDK45169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 460

 Score = 51.5 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 2/114 (1%)

Query: 36  LHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK--KFRSIFKEADRSRGDTSHNLISFLE 93
                +    +Y G  L+ K+  K  +    +   +  +  K    +    +    + LE
Sbjct: 44  QKWTAKSETRAYHGEHLKEKRFKKVLFDPELKTYSQLDASLKGEAVAPTPITLQTYAALE 103

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
            RL+  V+R+ F  ++  ARQF+    V VNG  +   S+  K GDV  V  + 
Sbjct: 104 KRLEFAVFRSMFASSVRQARQFILGGFVKVNGVKIRHPSFPLKSGDVFSVDPEK 157


>gi|126952165|gb|ABO28192.1| ribosomal protein S4 [Wenzelia dolichophylla]
          Length = 58

 Score = 51.5 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 4/61 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L   +    
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEENKNCVF 56

Query: 61 Y 61
           
Sbjct: 57 I 57


>gi|219852959|ref|YP_002467391.1| 30S ribosomal protein S4P [Methanosphaerula palustris E1-9c]
 gi|254764598|sp|B8GEG7|RS4_METPE RecName: Full=30S ribosomal protein S4P
 gi|219547218|gb|ACL17668.1| ribosomal protein S4 [Methanosphaerula palustris E1-9c]
          Length = 181

 Score = 51.5 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           LE RL T+VYR     +   ARQ V H H+ + GR V+I SYR       
Sbjct: 106 LERRLQTMVYRQGLARSPKQARQMVTHGHIAIAGRRVDIPSYRVPRDQET 155


>gi|76802057|ref|YP_327065.1| 30S ribosomal protein S4P [Natronomonas pharaonis DSM 2160]
 gi|90101697|sp|Q3IQT8|RS4_NATPD RecName: Full=30S ribosomal protein S4P
 gi|76557922|emb|CAI49506.1| ribosomal protein S4 [Natronomonas pharaonis DSM 2160]
          Length = 174

 Score = 51.5 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 27/53 (50%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +   LE RL T+ YR     T   ARQF+ H HV VNG  V+  SY+    + 
Sbjct: 99  VTDILERRLQTVAYRKGLGNTPQQARQFIAHGHVTVNGARVSAPSYKVDVAEE 151


>gi|41615041|ref|NP_963539.1| 30S ribosomal protein S4P [Nanoarchaeum equitans Kin4-M]
 gi|61215657|sp|Q74NF7|RS4_NANEQ RecName: Full=30S ribosomal protein S4P
 gi|40068765|gb|AAR39100.1| NEQ247 [Nanoarchaeum equitans Kin4-M]
          Length = 180

 Score = 51.5 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 29/49 (59%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           LE RL T++ R     T+  ARQF+ H H++VNG  V+  SY  K+ + 
Sbjct: 100 LERRLQTMLVRKGLAKTMKQARQFIVHGHIMVNGEVVDAPSYLVKKEEE 148


>gi|112799402|gb|ABI23026.1| ribosomal protein small subunit S9 [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
 gi|255513948|gb|EET90213.1| ribosomal protein S4 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 187

 Score = 51.1 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           LE RL T+V++     TI  ARQ + H  + VN + V+I  Y   
Sbjct: 99  LERRLQTVVFKKGLARTIKQARQLITHGFIAVNMKRVSIPGYMVT 143


>gi|57641440|ref|YP_183918.1| 30S ribosomal protein S4 [Thermococcus kodakarensis KOD1]
 gi|73919022|sp|Q5JJF2|RS4_PYRKO RecName: Full=30S ribosomal protein S4P
 gi|57159764|dbj|BAD85694.1| SSU ribosomal protein S4P [Thermococcus kodakarensis KOD1]
          Length = 180

 Score = 51.1 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/44 (43%), Positives = 24/44 (54%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
           LE RL TIVYR     T+  ARQ + H H+ VNG+ +    Y  
Sbjct: 101 LERRLQTIVYRKGLARTMKQARQLIVHGHIEVNGQVIRSPGYLV 144


>gi|126465713|ref|YP_001040822.1| 30S ribosomal protein S4P [Staphylothermus marinus F1]
 gi|152112263|sp|A3DMQ4|RS4_STAMF RecName: Full=30S ribosomal protein S4P
 gi|126014536|gb|ABN69914.1| SSU ribosomal protein S4P [Staphylothermus marinus F1]
          Length = 168

 Score = 51.1 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 27/64 (42%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           +  E           +   LE RL TIVY+     TI+ ARQ + H H+ + GR +    
Sbjct: 82  LLHENASLEDVLGLTVEDLLERRLQTIVYKKGLARTIYHARQLIIHGHIAIAGRRITSPG 141

Query: 133 YRCK 136
           Y   
Sbjct: 142 YIVS 145


>gi|112253922|ref|YP_717175.1| ribosomal protein S4 [Brassica napus]
 gi|37591124|dbj|BAC98926.1| ribosomal protein S4 [Brassica napus]
          Length = 362

 Score = 51.1 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QL+  +K+  +YGD+   +     K             +  LE+R D I+ R  F+ TI
Sbjct: 67  IQLQTTRKLSLFYGDLPITEMHRGTKRTSYIP------FLLNLETRFDVILLRLHFLETI 120

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V VN   V+I   +   GD+I  ++ 
Sbjct: 121 PQARQLISHRRVCVNKGMVSITHLKLSHGDIISFQEN 157


>gi|321248591|ref|XP_003191176.1| nam9 protein, mitochondrial precursor [Cryptococcus gattii WM276]
 gi|317457643|gb|ADV19389.1| nam9 protein, mitochondrial precursor, putative [Cryptococcus
           gattii WM276]
          Length = 317

 Score = 51.1 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           R      L + +E RLD +++R+ F   ++ AR++V   HV +NG+ +   +     GDV
Sbjct: 129 RAPVGTMLFADVERRLDVLIFRSCFAQNVWEARRYVVQGHVKLNGQVIRNPNIMLNPGDV 188

Query: 141 IEVKQKS--KQLASVLEASQLAERDV 164
             V         A   ++ Q AE DV
Sbjct: 189 FTVNPSQIVMLQAPKSKSQQSAEGDV 214


>gi|58263106|ref|XP_568963.1| nam9 protein, mitochondrial precursor [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57223613|gb|AAW41656.1| nam9 protein, mitochondrial precursor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 317

 Score = 51.1 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           R      L + +E RLD +++R+ F   ++ AR++V   HV +NG+ +   +     GDV
Sbjct: 129 RAPVGTMLFADIERRLDVLIFRSCFAQNVWEARRYVVQGHVKLNGQVMRNPNIMLNPGDV 188

Query: 141 IEVKQKS 147
             V    
Sbjct: 189 FTVNPSQ 195


>gi|257076681|ref|ZP_05571042.1| 30S ribosomal protein S4 [Ferroplasma acidarmanus fer1]
          Length = 195

 Score = 51.1 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 23/161 (14%)

Query: 3   KRESSKHKIDRRIGENLWGRPKSPVNTRSYGP-GLHGQRRKSKPS----YFGLQLRAKQK 57
           +  + +H          W + +     +     GL  +R   K       +  Q R  Q 
Sbjct: 10  RYSTPRH---------PWEKERIDSERQVVAKYGLKNKRELWKAEAILSSYRAQARTLQA 60

Query: 58  MKKYYGDISEKKFRSIFK---------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108
             +Y   I+EK+F+ + K         E        + N+ + L+ RL T+VY+     T
Sbjct: 61  KVRYNDPIAEKQFQLLLKKLDKLSLLSEGATLDDILALNIENILDRRLQTLVYQLNMATT 120

Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           +  ARQ + H H+ V    V I S    +G    +    K 
Sbjct: 121 MKQARQLITHGHIKVGDHIVTIPSIAVLKGQEDSITYSEKS 161


>gi|134107834|ref|XP_777299.1| hypothetical protein CNBB1020 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259989|gb|EAL22652.1| hypothetical protein CNBB1020 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 317

 Score = 51.1 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           R      L + +E RLD +++R+ F   ++ AR++V   HV +NG+ +   +     GDV
Sbjct: 129 RAPVGTMLFADIERRLDVLIFRSCFAQNVWEARRYVVQGHVKLNGQVMRNPNIMLNPGDV 188

Query: 141 IEVKQKS 147
             V    
Sbjct: 189 FTVNPSQ 195


>gi|325969209|ref|YP_004245401.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28]
 gi|323708412|gb|ADY01899.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28]
          Length = 179

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/48 (43%), Positives = 26/48 (54%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
            L+ RL +IVYR     TI+ ARQ V H H+ V+GR V    Y    G
Sbjct: 103 ILDRRLQSIVYRRGLAKTIYEARQLVTHGHIAVDGRVVKSPGYLVPRG 150


>gi|261403747|ref|YP_003247971.1| ribosomal protein S4 [Methanocaldococcus vulcanius M7]
 gi|261370740|gb|ACX73489.1| ribosomal protein S4 [Methanocaldococcus vulcanius M7]
          Length = 186

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 14/131 (10%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMKKYYGDISEK------KFRSIFKE 76
           K  +         +G RRK +       LR  +++ ++   D +E+      +  ++ ++
Sbjct: 21  KDRIEREKELCKKYGLRRKREVWKAETILRKYRRQARRLISDRTEQGAKEAVQLFNVLRK 80

Query: 77  --ADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
               +    T  +++S      LE RL T+V+R     T   ARQ + HRH+ V+GR V 
Sbjct: 81  YGILKIEDPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIIHRHIAVDGRVVT 140

Query: 130 IGSYRCKEGDV 140
             SY     + 
Sbjct: 141 SPSYMVSVEEE 151


>gi|254172951|ref|ZP_04879625.1| ribosomal protein S4 [Thermococcus sp. AM4]
 gi|214033107|gb|EEB73935.1| ribosomal protein S4 [Thermococcus sp. AM4]
          Length = 180

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
           LE RL T+VY+     TI  ARQ + H H+ VNG+ +    Y  
Sbjct: 101 LERRLQTLVYKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLV 144


>gi|240104025|ref|YP_002960334.1| 30S ribosomal protein S4P [Thermococcus gammatolerans EJ3]
 gi|259495300|sp|C5A251|RS4_THEGJ RecName: Full=30S ribosomal protein S4P
 gi|239911579|gb|ACS34470.1| SSU ribosomal protein S4P (rps4P) [Thermococcus gammatolerans EJ3]
          Length = 180

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
           LE RL T+VY+     TI  ARQ + H H+ VNG+ +    Y  
Sbjct: 101 LERRLQTLVYKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLV 144


>gi|323649909|ref|YP_004237282.1| ribosomal protein S4 [Ricinus communis]
 gi|322394289|gb|ADW96046.1| ribosomal protein S4 [Ricinus communis]
          Length = 352

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 22/164 (13%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y           +     +Q +  +K+  ++GD+   +     +      
Sbjct: 38  NKKKDIKRKIYP---------RENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP 88

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
                  +   E+R D I  R  F  TI  ARQ ++HR V VN   V+I   +   GD+I
Sbjct: 89  ------FLLNPETRSDVIPVRLHFCETIPQARQPISHRRVCVNNGMVSITHLKVSHGDII 142

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
             K    ++       +  E     YI ++ + ++  F+  P  
Sbjct: 143 SFKANDARI-------RGEEIRRFFYIEISVEKIIGKFLDHPVR 179


>gi|305662632|ref|YP_003858920.1| SSU ribosomal protein S4P [Ignisphaera aggregans DSM 17230]
 gi|304377201|gb|ADM27040.1| SSU ribosomal protein S4P [Ignisphaera aggregans DSM 17230]
          Length = 168

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 66  SEKKFRSIFKEADRS----------RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
            EK+F+ + ++                    ++ + L+ RL T+V++     TI  ARQ 
Sbjct: 66  REKQFKQLVRKLYNLGILKSENVDINDILGLSVEAILDRRLQTLVWKKGLAKTIHQARQL 125

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDV 140
           + H H+ + GR V    Y     + 
Sbjct: 126 IVHGHIAIKGRRVTSPGYLVPIDEE 150


>gi|300711113|ref|YP_003736927.1| 30S ribosomal protein S4P [Halalkalicoccus jeotgali B3]
 gi|299124796|gb|ADJ15135.1| 30S ribosomal protein S4P [Halalkalicoccus jeotgali B3]
          Length = 174

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 27/53 (50%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +   LE RL T+ YR     T   ARQF+ H HV V+G+ V + SY  +    
Sbjct: 99  VTDLLERRLQTVAYRKGVGNTPKQARQFIAHGHVTVDGQRVTVPSYMVEVSQE 151


>gi|268309108|gb|ACY95512.1| ribosomal protein S4 [Dicranum scoparium]
          Length = 57

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + +I RR+G       K+P         ++      K S + ++L  KQK++ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSGS---INQSTSNKKVSQYRIRLEEKQKLRF 57


>gi|126952146|gb|ABO28183.1| ribosomal protein S4 [Paramignya scandens]
          Length = 59

 Score = 50.7 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L    K+  
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQYRIRLEENTKIAF 56


>gi|315229893|ref|YP_004070329.1| 30S ribosomal protein S9e (S4p) [Thermococcus barophilus MP]
 gi|315182921|gb|ADT83106.1| SSU ribosomal protein S9e (S4p) [Thermococcus barophilus MP]
          Length = 181

 Score = 50.3 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 25/46 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             LE RL T+VY+     TI  ARQ + H H+ VNG+ +   SY  
Sbjct: 99  DILERRLQTLVYKKGLARTIKQARQLIVHGHIEVNGQIIRSPSYLV 144


>gi|288931230|ref|YP_003435290.1| ribosomal protein S4 [Ferroglobus placidus DSM 10642]
 gi|288893478|gb|ADC65015.1| ribosomal protein S4 [Ferroglobus placidus DSM 10642]
          Length = 171

 Score = 50.3 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 28/51 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
            FLE RL TIVYR     TI  ARQ + H H+ + GR V   SY  ++ + 
Sbjct: 105 DFLERRLQTIVYRMGLANTIKQARQLIVHGHIAIAGRRVTSPSYIVEKDEE 155


>gi|146422017|ref|XP_001486951.1| hypothetical protein PGUG_00328 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146388072|gb|EDK36230.1| hypothetical protein PGUG_00328 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 465

 Score = 50.3 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS---- 147
           LE RL+  ++RA F  ++  ARQ++ + +V VNG  +   S+  K GD+  V  +     
Sbjct: 101 LEKRLEFAMFRAMFASSVRQARQYILNGYVKVNGVIIKHPSFPLKSGDIFSVIPEKVLTA 160

Query: 148 --KQLASVLEASQLAERDVPEY 167
             +   SV +A  +    +  +
Sbjct: 161 MGRTKPSVQKAISVDSTQIAAW 182


>gi|2500402|sp|Q31708|RT04_ARATH RecName: Full=Ribosomal protein S4, mitochondrial
          Length = 362

 Score = 50.3 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QL+  +K+  +YGD+   +     K             +  LE+R D I  R  F+ TI
Sbjct: 67  IQLQTTRKLPFFYGDLPITEMHRGTKRTSYIP------FLLNLETRFDVIPLRLYFLETI 120

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V VN   V+I  ++   GD+I  ++ 
Sbjct: 121 PQARQLISHRRVCVNKGMVSITHFKLSHGDIISFQEN 157


>gi|322369536|ref|ZP_08044101.1| 30S ribosomal protein S4P [Haladaptatus paucihalophilus DX253]
 gi|320551268|gb|EFW92917.1| 30S ribosomal protein S4P [Haladaptatus paucihalophilus DX253]
          Length = 173

 Score = 50.3 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 29/49 (59%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           LE RL T+ YR     T   ARQF+ H HV V+G+ V++ SY+ +  + 
Sbjct: 101 LERRLQTVAYRKGLAHTPKQARQFITHGHVTVDGQRVSVPSYKVEIDEE 149


>gi|242398331|ref|YP_002993755.1| 30S ribosomal protein S4P [Thermococcus sibiricus MM 739]
 gi|259495301|sp|C6A1B1|RS4_THESM RecName: Full=30S ribosomal protein S4P
 gi|242264724|gb|ACS89406.1| 30S ribosomal protein S4P [Thermococcus sibiricus MM 739]
          Length = 180

 Score = 50.3 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             LE RL T+V++     TI  ARQ + H H+ VNG+ +   SY  
Sbjct: 99  DILERRLQTLVFKKGLARTIKQARQLIVHGHIEVNGQIIRSPSYLV 144


>gi|294495900|ref|YP_003542393.1| 30S ribosomal protein S4P [Methanohalophilus mahii DSM 5219]
 gi|292666899|gb|ADE36748.1| SSU ribosomal protein S4P [Methanohalophilus mahii DSM 5219]
          Length = 184

 Score = 50.3 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 29/57 (50%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           N    LE RL T+V+R     T   ARQF+ H H+ ++G+ + +      + D + +
Sbjct: 101 NTEVILERRLQTLVHRLGLARTPKQARQFITHGHIAIDGKKLTVPGMLVSKQDEMMI 157


>gi|88604134|ref|YP_504312.1| 30S ribosomal protein S4P [Methanospirillum hungatei JF-1]
 gi|121721493|sp|Q2FT97|RS4_METHJ RecName: Full=30S ribosomal protein S4P
 gi|88189596|gb|ABD42593.1| SSU ribosomal protein S4P [Methanospirillum hungatei JF-1]
          Length = 181

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 25/51 (49%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
             L+ RL T VYR  F  +   ARQF+ H H+ + GR V I  Y     + 
Sbjct: 104 QQLDRRLQTQVYRRGFARSPKQARQFITHGHIAIGGRRVTIPGYTVSAKEQ 154


>gi|126952056|gb|ABO28139.1| ribosomal protein S4 [Citrus limonia]
          Length = 59

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  K K+  
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKTKIAF 56


>gi|14520744|ref|NP_126219.1| 30S ribosomal protein S4P [Pyrococcus abyssi GE5]
 gi|18978021|ref|NP_579378.1| 30S ribosomal protein S4 [Pyrococcus furiosus DSM 3638]
 gi|48429105|sp|P61992|RS4_PYRAB RecName: Full=30S ribosomal protein S4P
 gi|48429106|sp|P61993|RS4_PYRFU RecName: Full=30S ribosomal protein S4P
 gi|5457960|emb|CAB49450.1| rps4P SSU ribosomal protein S4P [Pyrococcus abyssi GE5]
 gi|18893804|gb|AAL81773.1| SSU ribosomal protein S4P [Pyrococcus furiosus DSM 3638]
          Length = 180

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 25/46 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             LE RL TIVY+     T+  ARQ + H H+ VNG+ +   SY  
Sbjct: 99  DILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLV 144


>gi|170291191|ref|YP_001738007.1| 30S ribosomal protein S4P [Candidatus Korarchaeum cryptofilum OPF8]
 gi|226699077|sp|B1L795|RS4_KORCO RecName: Full=30S ribosomal protein S4P
 gi|170175271|gb|ACB08324.1| ribosomal protein S4 [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 166

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            FLE RL TIV+R  F  + + ARQ + H H+ VNGR +   SY  K  +  +++     
Sbjct: 98  QFLERRLQTIVWRKGFAKSPYMARQLITHGHIRVNGRRIRQPSYLVKIEEEDKIECLHPS 157

Query: 150 LASVLE 155
              V +
Sbjct: 158 CLEVEK 163


>gi|307594976|ref|YP_003901293.1| 30S ribosomal protein S4 [Vulcanisaeta distributa DSM 14429]
 gi|307550177|gb|ADN50242.1| ribosomal protein S4 [Vulcanisaeta distributa DSM 14429]
          Length = 182

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 25/45 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           L+ RL TIVYR     TI+ ARQ V H H+ V+GR V    Y   
Sbjct: 104 LDRRLQTIVYRKGLARTIYEARQLVTHGHIAVDGRVVRSPGYLVP 148


>gi|126952069|gb|ABO28145.1| ribosomal protein S4 [Citrus obovoidea]
          Length = 58

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S + ++L  KQK+  
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQLRSVKKSQYRIRLEEKQKLVF 56

Query: 61 Y 61
           
Sbjct: 57 I 57


>gi|297618743|ref|YP_003706848.1| ribosomal protein S4 [Methanococcus voltae A3]
 gi|297377720|gb|ADI35875.1| ribosomal protein S4 [Methanococcus voltae A3]
          Length = 177

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 32/102 (31%)

Query: 67  EKKFRSIFKEADRSRGDTSH--------------------------------NLISFLES 94
           E + R+  ++A +   +T+                                 N+ + L+ 
Sbjct: 45  ETQLRNYRRQARKLISNTTAQGVKEAIQLFAVLKRYGILNEQEPTLDHVLSLNIENILDR 104

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           RL TIVY      T   ARQF+ H H+ VNGR V+  SY  +
Sbjct: 105 RLQTIVYEKGLARTPKQARQFIVHGHIAVNGRKVSSPSYLVE 146


>gi|171185874|ref|YP_001794793.1| 30S ribosomal protein S4P [Thermoproteus neutrophilus V24Sta]
 gi|226695089|sp|B1Y9B8|RS4_THENV RecName: Full=30S ribosomal protein S4P
 gi|170935086|gb|ACB40347.1| ribosomal protein S4 [Thermoproteus neutrophilus V24Sta]
          Length = 159

 Score = 50.3 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 25/46 (54%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            LE RL TIVYR     +I+ ARQ + H H+ V GR V+   +   
Sbjct: 103 ILERRLQTIVYRMGLAKSIYHARQLIVHGHIAVAGRRVSSPGFLVP 148


>gi|118431573|ref|NP_148135.2| 30S ribosomal protein S4 [Aeropyrum pernix K1]
 gi|7388201|sp|Q9YB58|RS4_AERPE RecName: Full=30S ribosomal protein S4P
 gi|116062898|dbj|BAA80740.2| 30S ribosomal protein S4P [Aeropyrum pernix K1]
          Length = 171

 Score = 49.9 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/52 (40%), Positives = 25/52 (48%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             N    LE RL TIVY+     TI+ ARQ V H H+ + GR V    Y   
Sbjct: 95  GINAEKVLERRLQTIVYKKGLAKTIYQARQLVVHGHIAIAGRRVTSPGYLVS 146


>gi|14591410|ref|NP_143490.1| 30S ribosomal protein S4 [Pyrococcus horikoshii OT3]
 gi|6647790|sp|O59306|RS4_PYRHO RecName: Full=30S ribosomal protein S4P
 gi|3258069|dbj|BAA30752.1| 180aa long hypothetical 30S ribosomal protein S4 [Pyrococcus
           horikoshii OT3]
          Length = 180

 Score = 49.9 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 25/46 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             LE RL TIVY+     T+  ARQ + H H+ VNG+ +   SY  
Sbjct: 99  DILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLV 144


>gi|145592094|ref|YP_001154096.1| 30S ribosomal protein S4 [Pyrobaculum arsenaticum DSM 13514]
 gi|152112250|sp|A4WM27|RS4_PYRAR RecName: Full=30S ribosomal protein S4P
 gi|145283862|gb|ABP51444.1| SSU ribosomal protein S4P [Pyrobaculum arsenaticum DSM 13514]
          Length = 159

 Score = 49.9 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 24/46 (52%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            LE RL TIVYR     +I+ ARQ + H H+ + GR V    +   
Sbjct: 103 ILERRLQTIVYRMGLAKSIYHARQLIVHGHIAIEGRRVTSPGFLVP 148


>gi|268324995|emb|CBH38583.1| 30S ribosomal protein S4P [uncultured archaeon]
          Length = 166

 Score = 49.9 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           LE RL T VY+ +   +I  ARQ + H H+ V+GR V I SY  +E + 
Sbjct: 109 LERRLQTRVYKKELANSIKHARQLIVHGHIAVDGRRVTIPSYIIREDEE 157


>gi|212223249|ref|YP_002306485.1| 30S ribosomal protein S4 [Thermococcus onnurineus NA1]
 gi|226695090|sp|B6YSQ1|RS4_THEON RecName: Full=30S ribosomal protein S4P
 gi|212008206|gb|ACJ15588.1| SSU ribosomal protein S4P [Thermococcus onnurineus NA1]
          Length = 180

 Score = 49.9 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           L+ RL TIV++     TI  ARQ + H H+ VNG+ +    Y   + +  +    SK   
Sbjct: 101 LDRRLQTIVFKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLVLKEEE-DTITYSKTSP 159

Query: 152 SVLEA 156
              E+
Sbjct: 160 FAKES 164


>gi|119872421|ref|YP_930428.1| 30S ribosomal protein S4P [Pyrobaculum islandicum DSM 4184]
 gi|152112252|sp|A1RT03|RS4_PYRIL RecName: Full=30S ribosomal protein S4P
 gi|119673829|gb|ABL88085.1| SSU ribosomal protein S4P [Pyrobaculum islandicum DSM 4184]
          Length = 159

 Score = 49.5 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 24/46 (52%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            LE RL TIVYR     +I+ ARQ V H HV V GR V    +   
Sbjct: 103 ILERRLQTIVYRKGLAKSIYHARQLVVHGHVAVAGRRVTSPGFLVP 148


>gi|18313809|ref|NP_560476.1| 30S ribosomal protein S4P [Pyrobaculum aerophilum str. IM2]
 gi|26399437|sp|Q8ZTV1|RS4_PYRAE RecName: Full=30S ribosomal protein S4P
 gi|18161370|gb|AAL64658.1| ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
          Length = 159

 Score = 49.5 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 23/46 (50%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            LE RL TIVYR     +I  ARQ + H HV V GR V    +   
Sbjct: 103 ILERRLQTIVYRMGLAKSIHHARQLIVHGHVAVAGRRVTSPGFLVP 148


>gi|315427190|dbj|BAJ48804.1| small subunit ribosomal protein S4 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315428157|dbj|BAJ49742.1| small subunit ribosomal protein S4 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 170

 Score = 49.5 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/55 (47%), Positives = 32/55 (58%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
            FLE RL TIV+R     TIF ARQ + H  VLV G+ V   SY  K G+  E++
Sbjct: 105 DFLERRLQTIVFRTGLARTIFHARQLITHGKVLVGGKKVRAPSYHVKRGEEEEIR 159


>gi|126459584|ref|YP_001055862.1| 30S ribosomal protein S4P [Pyrobaculum calidifontis JCM 11548]
 gi|152112251|sp|A3MUS9|RS4_PYRCJ RecName: Full=30S ribosomal protein S4P
 gi|126249305|gb|ABO08396.1| SSU ribosomal protein S4P [Pyrobaculum calidifontis JCM 11548]
          Length = 159

 Score = 49.5 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 24/46 (52%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            LE RL T+V+R     +I  ARQ V H HVLV GR V    +   
Sbjct: 103 ILERRLQTLVFRMGLAKSIHHARQLVVHGHVLVAGRRVTSPGFLVP 148


>gi|297741847|emb|CBI33207.3| unnamed protein product [Vitis vinifera]
          Length = 327

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 22/159 (13%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y                 +Q +  +K+  ++GD+   +          + 
Sbjct: 48  NKKRSIKRKIYP---------RDNLNSYIQSQTTRKLPLFHGDLPITEMHR------GTE 92

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            ++       LE+R D I  R  F  TI  ARQ ++HR V VN R V+I   +   GD+I
Sbjct: 93  RNSYILFPLNLETRSDVIPVRLHFCETIPQARQPISHRRVCVNNRMVSITHLKVSHGDII 152

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             ++   ++                YI ++ + ++  F+
Sbjct: 153 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFL 184


>gi|218884676|ref|YP_002429058.1| 30S ribosomal protein S4P [Desulfurococcus kamchatkensis 1221n]
 gi|218766292|gb|ACL11691.1| 30S ribosomal protein S4P [Desulfurococcus kamchatkensis 1221n]
          Length = 147

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 29/68 (42%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + KE  R     +  +   LE RL TIVY+     T+  ARQ + H H+ + GR V    
Sbjct: 59  LLKEGARLDDVLNLKIEDLLERRLQTIVYKKGLAKTLHEARQLIVHGHIAIGGRRVRSPG 118

Query: 133 YRCKEGDV 140
                 + 
Sbjct: 119 RIVTVDEE 126


>gi|310771926|emb|CBH28900.1| 40S RIBOSOMAL PROTEIN S9 [Anncaliia algerae]
          Length = 186

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 38/102 (37%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G IS+  +R +              ++ FLE RL   V+ +    ++  A   +NH+H+ 
Sbjct: 81  GIISDVDYRDLDDIRANLEKVLDLTVVDFLERRLQHRVFVSGLAISVHQAXNMINHKHIS 140

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDV 164
           VNG  V+   Y     +   V           +  +   R +
Sbjct: 141 VNGYVVDRPGYMVSVEEEGHVDIHXFSSLKGEKLGRSKRRKL 182


>gi|20094908|ref|NP_614755.1| 30S ribosomal protein S4 [Methanopyrus kandleri AV19]
 gi|26399409|sp|Q8TVC0|RS4_METKA RecName: Full=30S ribosomal protein S4P
 gi|19888144|gb|AAM02685.1| Ribosomal protein related to S4 [Methanopyrus kandleri AV19]
          Length = 186

 Score = 49.2 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 66  SEKKFRSIFKEA---DRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAARQFVN 117
            E  FR ++       +    T  +++       LE RL TIVYR     T   ARQ V 
Sbjct: 70  REALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQTIVYRKGLAKTPLQARQLVV 129

Query: 118 HRHVLVNGRSVNIGSYRCK 136
           HRH+ +  R V + SY   
Sbjct: 130 HRHIAIGDRIVTVPSYLVS 148


>gi|20271154|gb|AAM18532.1|AF375591_1 ribosomal protein S4 [Helianthus annuus]
          Length = 331

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 20/184 (10%)

Query: 8   KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG------LQLRAKQKMKKY 61
           + K  R +  N+W R  + +  R      +  R   +  Y        +QL+  +K+  +
Sbjct: 5   RFKTCRLLEGNVWNRELTIIQRRILRRLRNKTRSVKRMIYSRKNLNSYIQLQTTRKLPLF 64

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           +GD+   +     +                 E+R D I  R  F  T+  ARQ ++HR +
Sbjct: 65  HGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPVRLHFSETLPQARQPISHRRL 118

Query: 122 LVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVR 181
            VN   V+I S++  +GD I +K+         +A   +E     YI ++   ++   + 
Sbjct: 119 CVNNVIVSITSFQVSQGDFISLKE--------NDAIIYSEIRRSFYIEISVSKIIGKSLD 170

Query: 182 IPSS 185
            P  
Sbjct: 171 SPVR 174


>gi|313126019|ref|YP_004036289.1| SSU ribosomal protein s4p [Halogeometricum borinquense DSM 11551]
 gi|312292384|gb|ADQ66844.1| SSU ribosomal protein S4P [Halogeometricum borinquense DSM 11551]
          Length = 175

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 70  FRSI--FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            R      E D        ++   LE RL T+ YR     T   +RQF+ H HV+V+G  
Sbjct: 79  LRRYGILSEDDNISEVLGLDVTDILERRLQTVAYRKGLGHTPDQSRQFIVHGHVVVDGAR 138

Query: 128 VNIGSYRCKEGDV 140
           V   S   +  + 
Sbjct: 139 VTRPSKMVEVSEE 151


>gi|299739156|ref|XP_001835093.2| nam9 protein [Coprinopsis cinerea okayama7#130]
 gi|298403647|gb|EAU86735.2| nam9 protein [Coprinopsis cinerea okayama7#130]
          Length = 390

 Score = 48.8 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 32/63 (50%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              +   +E R+D  ++R  F  +++ AR+ V H  VL+NGR     + R   GD++ V 
Sbjct: 126 GSLMFQEVERRIDVFLFRCCFAHSVYEARRMVIHGDVLLNGRKHTNANTRLAPGDMVTVN 185

Query: 145 QKS 147
             +
Sbjct: 186 PDA 188


>gi|194033241|ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza sativa Japonica Group]
          Length = 352

 Score = 48.8 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++L+  +K+  YYGD+  ++     +             +   E+RLD I+ R  F  T+
Sbjct: 53  IKLQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRLDVILVRLHFCDTL 106

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V +N   V I   +   GD+I  ++ 
Sbjct: 107 PQARQLISHRRVCLNNGLVTITHLKVSHGDLISFQEN 143


>gi|257053587|ref|YP_003131420.1| 30S ribosomal protein S4P [Halorhabdus utahensis DSM 12940]
 gi|256692350|gb|ACV12687.1| ribosomal protein S4 [Halorhabdus utahensis DSM 12940]
          Length = 169

 Score = 48.8 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 26/49 (53%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           LE RL T+ YR     T   ARQF++H HV V+G  V+I S      + 
Sbjct: 98  LERRLQTVAYRKGLANTAQQARQFISHGHVTVDGERVSIPSKTVAVEEE 146


>gi|225444268|ref|XP_002280433.1| PREDICTED: similar to ribosomal protein S4 [Vitis vinifera]
          Length = 362

 Score = 48.8 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 22/159 (13%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y                 +Q +  +K+  ++GD+   +          + 
Sbjct: 48  NKKRSIKRKIYP---------RDNLNSYIQSQTTRKLPLFHGDLPITEMHR------GTE 92

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            ++       LE+R D I  R  F  TI  ARQ ++HR V VN R V+I   +   GD+I
Sbjct: 93  RNSYILFPLNLETRSDVIPVRLHFCETIPQARQPISHRRVCVNNRMVSITHLKVSHGDII 152

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFV 180
             ++   ++                YI ++ + ++  F+
Sbjct: 153 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFL 184


>gi|164657864|ref|XP_001730058.1| hypothetical protein MGL_3044 [Malassezia globosa CBS 7966]
 gi|159103952|gb|EDP42844.1| hypothetical protein MGL_3044 [Malassezia globosa CBS 7966]
          Length = 431

 Score = 48.8 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
            +  +E R+DT V+R  F  +++ AR  V H  V +NG       Y  + GD++ V+   
Sbjct: 116 FMRDVERRIDTAVFRCCFAHSVYYARSLVLHGKVSLNGNVHRDPGYLLQPGDLLSVEPSC 175

Query: 148 KQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQ 196
             + +   A +           V  D       + P  +++ P P    
Sbjct: 176 VPMLNGHVAKR-----------VQADRERHAVKKSPPEVQESPTPTKEN 213


>gi|57231035|gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0301]
          Length = 318

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 19/164 (11%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y           +     +Q +  +K+  ++GD+   +     +      
Sbjct: 26  NKKRSIKRKIY---------SRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP 76

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
                      E+R D I  R  F  TI  ARQ ++HR V VN   V+I  ++   GD+I
Sbjct: 77  ------FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHFKVSHGDLI 130

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
             ++   +  + L   +   R    YI ++ + ++  F+  P  
Sbjct: 131 SFQENDARTPNCLG--EEIRRSF--YIEISVEKIIGKFLDHPVR 170


>gi|148643486|ref|YP_001273999.1| 30S ribosomal protein S4P [Methanobrevibacter smithii ATCC 35061]
 gi|222445015|ref|ZP_03607530.1| hypothetical protein METSMIALI_00631 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350415|ref|ZP_05975832.1| ribosomal protein S4 [Methanobrevibacter smithii DSM 2374]
 gi|172048097|sp|A5UN53|RS4_METS3 RecName: Full=30S ribosomal protein S4P
 gi|148552503|gb|ABQ87631.1| ribosomal protein S4p [Methanobrevibacter smithii ATCC 35061]
 gi|222434580|gb|EEE41745.1| hypothetical protein METSMIALI_00631 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861198|gb|EFC93496.1| ribosomal protein S4 [Methanobrevibacter smithii DSM 2374]
          Length = 178

 Score = 48.4 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 26/51 (50%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
             L  RL TIVY+     T   AR FV H H+ +NG+ +N  SY   +G  
Sbjct: 99  DILRRRLQTIVYKKGLARTPKEARMFVVHGHITLNGKKINSPSYVVLKGQE 149


>gi|16082066|ref|NP_394492.1| 30S ribosomal protein S4P [Thermoplasma acidophilum DSM 1728]
 gi|26399492|sp|Q9HJD7|RS4_THEAC RecName: Full=30S ribosomal protein S4P
 gi|10640347|emb|CAC12161.1| probable 30S ribosomal protein S4 [Thermoplasma acidophilum]
          Length = 199

 Score = 48.4 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 9/101 (8%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTI 99
           R ++       QL    K    Y  +SE                 S  + + L+ RL TI
Sbjct: 61  RLRTNDVNAQKQLERMIKRLNRYKLLSE---------NATLDDVLSLTVENILDRRLQTI 111

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           V+R     ++  ARQ + H H+ V GR V +     +  D 
Sbjct: 112 VFRKNLAISVRQARQLITHGHISVAGRRVTVPGMLVEAKDE 152


>gi|288560163|ref|YP_003423649.1| ribosomal protein S4P Rps4p [Methanobrevibacter ruminantium M1]
 gi|288542873|gb|ADC46757.1| ribosomal protein S4P Rps4p [Methanobrevibacter ruminantium M1]
          Length = 178

 Score = 48.4 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV--IEVKQKS 147
             L  RL TIV++     T   AR FV H H+ +NG+ +N  SY  K G+   +     S
Sbjct: 99  DILRRRLQTIVFQKGLARTAKEARMFVVHGHIALNGKKINSPSYVVKRGEEEAVGFYHSS 158

Query: 148 KQLASVLEASQLAER 162
                + E ++ A +
Sbjct: 159 PVAKQIEEYNKAASQ 173


>gi|6978054|gb|AAF34262.1| truncated ribosomal protein small subunit 4 [Pteridium
          esculentum]
 gi|7453627|gb|AAF62914.1| truncated small subunit ribosomal protein 4 [Pteridium aquilinum
          subsp. latiusculum]
          Length = 67

 Score = 48.0 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K+ RR+        +   +          Q    K S F ++L AKQ+++ 
Sbjct: 1  MSRYRGPRLKLIRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRF 60

Query: 61 YYG 63
           YG
Sbjct: 61 NYG 63


>gi|71021869|ref|XP_761165.1| hypothetical protein UM05018.1 [Ustilago maydis 521]
 gi|46100645|gb|EAK85878.1| hypothetical protein UM05018.1 [Ustilago maydis 521]
          Length = 464

 Score = 48.0 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
              T+   +  +E RLD +V+R+ F  + + +R  V    V +NG   +  +   + GD+
Sbjct: 146 PMPTASLFMRDVERRLDVVVFRSCFARSAYESRSMVVQGKVTLNGVKCSNPNQLLEPGDL 205

Query: 141 IEVKQKSKQLASVLEASQLAER 162
           I V+  +  +     + +LA+R
Sbjct: 206 ISVQPSAVPML----SEELAKR 223


>gi|13541394|ref|NP_111082.1| 30S ribosomal protein S4P [Thermoplasma volcanium GSS1]
 gi|26399451|sp|Q97B95|RS4_THEVO RecName: Full=30S ribosomal protein S4P
 gi|14324777|dbj|BAB59704.1| ribosomal protein small subunit S9 [Thermoplasma volcanium GSS1]
          Length = 200

 Score = 48.0 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 68  KKFRSIFKEADRSRGDTSHNLI---------SFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           K+   + K   R +  +    +         + L+ RL TIV++     +   ARQ + H
Sbjct: 71  KQLERMIKRLSRYKILSDKATLDDVLSLTVENILDRRLQTIVFKKNLALSEKQARQLITH 130

Query: 119 RHVLVNGRSVNIGSYRCK 136
            H+ VNGR V +     +
Sbjct: 131 GHITVNGRRVTVPGMLVE 148


>gi|57231037|gb|AAW47279.1| ribosomal protein S4 [Amborella trichopoda]
          Length = 321

 Score = 48.0 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 21/162 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
           K     R   P         K     ++L+  +K+  ++GD+   +     +        
Sbjct: 32  KKRSIKRKISP--------RKNLNSYIKLQTTRKLSLFHGDLPITEMHRGTERTSYIP-- 81

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
                    E+R D I  R  F  T+  ARQ ++HR + VN   V+I   +   GD+I +
Sbjct: 82  ----FPLNPETRSDVIPVRLHFRETLPQARQPISHRRLCVNNGMVSITRLKVSHGDLISL 137

Query: 144 KQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
           K+   +       ++  ER    YI ++ + M+  F+  P  
Sbjct: 138 KENYAR-------TRGEERRRSFYIEISVEKMIGKFLDHPVR 172


>gi|330834007|ref|YP_004408735.1| 30S ribosomal protein S4P [Metallosphaera cuprina Ar-4]
 gi|329566146|gb|AEB94251.1| 30S ribosomal protein S4P [Metallosphaera cuprina Ar-4]
          Length = 180

 Score = 48.0 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 65  ISEKKFR-SIFKEADRSRGDT------SHNLISFLESRLDTIVYRAKFVPTIFAARQFVN 117
           + EK+    ++K        +           + LE RL TIV+R     TI+ ARQ + 
Sbjct: 68  MREKQLLSKLYKIGLLKSEQSSIDDVLGLEEENLLERRLQTIVHRKGLARTIYQARQLIV 127

Query: 118 HRHVLVNGRSVNIGSYRCKEGDV 140
           H H+ V GR V    Y  K  + 
Sbjct: 128 HGHIAVGGRKVTSPGYIVKRDEE 150


>gi|289619595|emb|CBI53878.1| unnamed protein product [Sordaria macrospora]
          Length = 460

 Score = 48.0 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 10/62 (16%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS----------VNIGSYRCKEGDVI 141
           LE RLD  ++RA F  +   ARQ V H  V VNG+           +    Y    GD+ 
Sbjct: 139 LERRLDIAIFRALFASSARQARQMVVHGAVTVNGKKACTHTHYHHDMKHPGYLLNPGDLF 198

Query: 142 EV 143
           +V
Sbjct: 199 QV 200


>gi|126179744|ref|YP_001047709.1| 30S ribosomal protein S4P [Methanoculleus marisnigri JR1]
 gi|152112229|sp|A3CWH7|RS4_METMJ RecName: Full=30S ribosomal protein S4P
 gi|125862538|gb|ABN57727.1| SSU ribosomal protein S4P [Methanoculleus marisnigri JR1]
          Length = 182

 Score = 48.0 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/47 (40%), Positives = 26/47 (55%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             L+ RL T+V R  F  +   ARQF+ H H+ + GR V I  YR +
Sbjct: 104 QQLDRRLQTLVLRRGFARSPKQARQFITHGHIAIKGRRVTIPGYRVE 150


>gi|320101540|ref|YP_004177132.1| 30S ribosomal protein S4P [Desulfurococcus mucosus DSM 2162]
 gi|319753892|gb|ADV65650.1| SSU ribosomal protein S4P [Desulfurococcus mucosus DSM 2162]
          Length = 170

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + KE  +     +  +   LE RL T+VY+     T+  ARQ + H H+ + GR +    
Sbjct: 82  LLKEGAKLDDVLNLRVEDLLERRLQTLVYKKGLAKTLHEARQLIVHGHIAIGGRRIRSPG 141

Query: 133 YRCKEGDV 140
                 + 
Sbjct: 142 RIVSVDEE 149


>gi|39951755|ref|XP_363594.1| hypothetical protein MGG_01520 [Magnaporthe oryzae 70-15]
 gi|145020635|gb|EDK04764.1| hypothetical protein MGG_01520 [Magnaporthe oryzae 70-15]
          Length = 445

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 74  FKEADRSRGDTSHNLISF--LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIG 131
           +    ++   T +  +++  +E RLD  ++RA F  +   ARQF  H  V VNG+ V+  
Sbjct: 124 YVTNLKTNRATPYMQMTYAPMERRLDIAIFRALFASSARQARQFCVHGFVKVNGQPVDPD 183

Query: 132 SYRCKEGDV 140
                 G  
Sbjct: 184 RVMMATGAK 192


>gi|126952017|gb|ABO28120.1| ribosomal protein S4 [Choisya ternata]
          Length = 58

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+      K  RR+G       K P      G     Q R  K S +    R K K+  
Sbjct: 1  MSRYRGPSFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSGKKSQYPNSFRRKTKIAF 56

Query: 61 YY 62
           +
Sbjct: 57 SF 58


>gi|325958563|ref|YP_004290029.1| 30S ribosomal protein S4 [Methanobacterium sp. AL-21]
 gi|325329995|gb|ADZ09057.1| ribosomal protein S4 [Methanobacterium sp. AL-21]
          Length = 178

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLI------SFLESRLDTIVYRAKFVPTIFAARQF 115
           + ++ + +  +  K     + D+    I        L  RL+TIVY+     T   AR F
Sbjct: 65  HAEVEKAQLLNHIKRLGMLKADSKLEDILDLTVEDVLRRRLETIVYKRGLSNTAKQARLF 124

Query: 116 VNHRHVLVNGRSVNIGSYRCKEGDV 140
           + H H+ +NGR +N   Y  K G+ 
Sbjct: 125 IVHGHIAMNGRKINAPGYLVKSGEE 149


>gi|85108124|ref|XP_962509.1| hypothetical protein NCU08296 [Neurospora crassa OR74A]
 gi|28924117|gb|EAA33273.1| predicted protein [Neurospora crassa OR74A]
          Length = 468

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 27/70 (38%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +          + LE RLD  ++RA F  +   ARQ V H  V VNG+     S R  
Sbjct: 125 GRKVPTPYEQMTFAPLERRLDIAIFRALFASSARQARQMVVHGAVTVNGKKACTPSQRSN 184

Query: 137 EGDVIEVKQK 146
                 +K  
Sbjct: 185 TESHNTMKHP 194


>gi|13449315|ref|NP_085497.1| ribosomal protein S4 [Arabidopsis thaliana]
 gi|15226130|ref|NP_178806.1| ribosomal protein S4 (RPS4) [Arabidopsis thaliana]
 gi|1460051|emb|CAA65380.1| small ribosomal protein 4 [Arabidopsis thaliana]
 gi|6851017|emb|CAA69772.3| ribosomal protein S4 [Arabidopsis thaliana]
 gi|20197644|gb|AAM15172.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251018|gb|AEC06112.1| ribosomal protein S4 [Arabidopsis thaliana]
          Length = 362

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 13/136 (9%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QL+  +K+  ++GD+   +     K                 E+R D I  R  F+ TI
Sbjct: 67  IQLQTTRKLPLFHGDLPITEMHRGTKRTSYIP------FPLNPETRFDVIPLRLHFLETI 120

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
             ARQ ++HR V VN   V+I  ++   GD+I      ++  +++   ++       Y  
Sbjct: 121 PQARQPISHRRVCVNKGMVSITHFKLSHGDII----SFQENNAIIRGEEIRRSF---YKE 173

Query: 170 VNHDNMVATFVRIPSS 185
           ++ + ++   +  P  
Sbjct: 174 ISVEKIIGKLLHQPLR 189


>gi|200004029|ref|YP_002221364.1| putative ribosomal protein S4 [Blastocystis sp. DMP/02-328]
 gi|198385453|gb|ACH86047.1| putative ribosomal protein S4 [Blastocystis sp. DMP/02-328]
          Length = 922

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 67/176 (38%), Gaps = 16/176 (9%)

Query: 13  RRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
           R    NL  + K   N +                 +    R     + YY   + K+F  
Sbjct: 27  RNFKINLTFKNKKWSNFKLLTQQQ---------PIYLCHFRKLNIKRFYYYKFNNKQFLK 77

Query: 73  IFKEADRSRGDTSHNL---ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
            +    +     +H +      +E RLD  +Y+AKFVP++FAA  ++ + ++ VN + + 
Sbjct: 78  KYLVNYKEYNFKTHIISLNFKTIERRLDYNLYKAKFVPSLFAAHFYITNGYIFVNQKCIK 137

Query: 130 IGSYRCKEGDVIEVKQKSKQL-ASVLEASQLAERDVPEY---ISVNHDNMVATFVR 181
             ++  +  D + +  K   +    L  + L + +   Y   + ++       F+ 
Sbjct: 138 NCNFILQTNDRVTIHSKIYNICKQTLINTFLTKNETLNYIKNLEIDFTTCSFIFLN 193


>gi|124027413|ref|YP_001012733.1| 30S ribosomal protein S4P [Hyperthermus butylicus DSM 5456]
 gi|152060953|sp|A2BK77|RS4_HYPBU RecName: Full=30S ribosomal protein S4P
 gi|123978107|gb|ABM80388.1| 30S ribosomal protein S4p [Hyperthermus butylicus DSM 5456]
          Length = 176

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           LE RL TIVY+     TI+ ARQ + H H+ + GR +    Y  K+ + 
Sbjct: 101 LERRLQTIVYKKGLARTIYEARQLIVHGHIAIAGRKIRSPGYLVKKDEE 149


>gi|153799850|gb|ABS50656.1| ribosomal protein S4 [Arabidopsis thaliana]
 gi|153799852|gb|ABS50657.1| ribosomal protein S4 [Arabidopsis thaliana]
          Length = 314

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 13/136 (9%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QL+  +K+  ++GD+   +     K                 E+R D I  R  F+ TI
Sbjct: 37  IQLQTTRKLPLFHGDLPITEMHRGTKRTSYIP------FPLNPETRFDVIPLRLHFLETI 90

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
             ARQ ++HR V VN   V+I  ++   GD+I      ++  +++   ++       Y  
Sbjct: 91  PQARQPISHRRVCVNKGMVSITHFKLSHGDII----SFQENNAIIRGEEIRRSF---YKE 143

Query: 170 VNHDNMVATFVRIPSS 185
           ++ + ++   +  P  
Sbjct: 144 ISVEKIIGKLLHQPLR 159


>gi|126952029|gb|ABO28126.1| ribosomal protein S4 [Citrus aurantium]
          Length = 59

 Score = 47.6 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P     +       ++    ++    +  KQK++ 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDFRNQSRSVKKSLISNFV---IEEKQKLRF 57

Query: 61 YY 62
          +Y
Sbjct: 58 HY 59


>gi|146304894|ref|YP_001192210.1| 30S ribosomal protein S4P [Metallosphaera sedula DSM 5348]
 gi|172046964|sp|A4YIN4|RS4_METS5 RecName: Full=30S ribosomal protein S4P
 gi|145703144|gb|ABP96286.1| SSU ribosomal protein S4P [Metallosphaera sedula DSM 5348]
          Length = 180

 Score = 47.2 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 97  DTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
            TIV+R     TI+ ARQ + H H+ V GR +    Y  K  + 
Sbjct: 107 QTIVHRKGLARTIYQARQLIVHGHIAVGGRKITSPGYIVKRDEE 150


>gi|169841793|ref|ZP_02874902.1| hypothetical protein cdivTM_31840 [candidate division TM7
           single-cell isolate TM7a]
          Length = 48

 Score = 47.2 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 166 EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
            ++  +   +  +    P   +  P    +   L+VE+YSR
Sbjct: 11  SWMKSDVKGLKFSITGNPKREEAEP---DINEQLIVEYYSR 48


>gi|149192394|ref|ZP_01870595.1| 30S ribosomal protein S4 [Vibrio shilonii AK1]
 gi|148833785|gb|EDL50821.1| 30S ribosomal protein S4 [Vibrio shilonii AK1]
          Length = 29

 Score = 47.2 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 3/32 (9%)

Query: 175 MVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           M  TF R+P           +  +L+VE YS+
Sbjct: 1   MEGTFKRMPERSD---LSADINEHLIVELYSK 29


>gi|55376997|ref|YP_134847.1| 30S ribosomal protein S4P [Haloarcula marismortui ATCC 43049]
 gi|266976|sp|Q00862|RS4_HALMA RecName: Full=30S ribosomal protein S4P; AltName: Full=HmaS4
 gi|148771|gb|AAA73210.1| ribosomal protein HmaS4 [Haloarcula marismortui]
 gi|55229722|gb|AAV45141.1| 30S ribosomal protein S4P [Haloarcula marismortui ATCC 43049]
          Length = 171

 Score = 47.2 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           LE RL T+VYR  +  T   ARQF+ H H++++   V       +
Sbjct: 99  LERRLQTVVYRKGYANTPEQARQFIVHGHIVLDDARVTRPGMTVE 143


>gi|289065161|ref|YP_003434213.1| ribosomal protein S4 [Chattonella marina]
 gi|288871873|dbj|BAI70560.1| ribosomal protein S4 [Chattonella marina]
          Length = 263

 Score = 47.2 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 7/130 (5%)

Query: 17  ENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76
            N +   K+    +S         R    +Y+   L  KQ++K +Y ++   K ++  K 
Sbjct: 43  INCFFHSKNQFLKKSNLYDSFKNNRF--KNYYRQNLILKQQLKNFY-NLQNYKVKNFVKR 99

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
               +     N I+  E RLD  +YR KF+ T+   RQ++N+ ++L+N +  +  SY+ K
Sbjct: 100 ELLEKD----NFINCFEKRLDVFLYRTKFLKTLLQIRQWINYNNILINRKKQSYISYQLK 155

Query: 137 EGDVIEVKQK 146
            GD++E K +
Sbjct: 156 SGDLLEFKDQ 165


>gi|294337074|emb|CAQ52687.1| ribosomal protein S4 [Aulacomnium androgynum]
          Length = 46

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGALPGLTTKTPQLKSS 31


>gi|269986618|gb|EEZ92900.1| ribosomal protein S4 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 176

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
           R +             NL +F++ RL T V +     +I  +RQ + HRH+ V+G+ ++ 
Sbjct: 81  RGLVSSTATVDDVLELNLENFMDRRLQTFVLKKGMARSIRESRQVITHRHIAVDGKIIDS 140

Query: 131 GSYRCKEGDV 140
            SY  K+ + 
Sbjct: 141 PSYMVKKEEE 150


>gi|224020959|ref|YP_002608192.1| ribosomal protein S4 [Carica papaya]
 gi|170522371|gb|ACB20481.1| ribosomal protein S4 [Carica papaya]
          Length = 352

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 22/164 (13%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y           K     +Q +  +K+  ++GD+   +     +      
Sbjct: 38  NKKRSIKRKIYP---------RKNLNSYIQSQTTRKLSLFHGDLPITEMHRGTERTSYIP 88

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
                      E+RLD I  R  F  T+  ARQ ++HR V VN   V+I   +   GD+I
Sbjct: 89  ------FPLNPETRLDVIPVRLHFRETLPQARQPISHRRVCVNNGMVSITRLKLSHGDII 142

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
             ++   ++                YI ++ + ++  F   P  
Sbjct: 143 SFQENDARIRGEEIRRSF-------YIEISVEKIIGKFRNHPVR 179


>gi|57231033|gb|AAW47277.1| ribosomal protein S4 [Eschscholzia californica]
          Length = 319

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 13/144 (9%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             +     +Q +  +K+  ++GD+   +         R+   +        E+R D I  
Sbjct: 42  PRENLNSYIQSQTTRKLPLFHGDLPITEMHR------RTERTSYIPFPLNPETRSDVIPV 95

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R  F  TI  ARQ ++HR V VN   V+I  ++   GD+I  ++   +            
Sbjct: 96  RLHFRETIPQARQPISHRRVCVNNGMVSITHWKVCYGDLISFQENDARTRGEEIRRSF-- 153

Query: 162 RDVPEYISVNHDNMVATFVRIPSS 185
                YI ++ + ++  F+  P  
Sbjct: 154 -----YIDISVEKIIGKFLAHPVR 172


>gi|57231019|gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus]
          Length = 319

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 22/164 (13%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y           +     ++L+  +K+  ++GD+   +     +      
Sbjct: 31  NKKRSIKRKIYP---------RENLNSYIKLQTTRKLPLFHGDLPITEMHRGTERTSYIP 81

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
                      E+R D I  R  F  TI  ARQ ++HR V VN   V+I   +   GD+I
Sbjct: 82  ------FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLI 135

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
             K+   +                 YI ++ + ++  F+  P  
Sbjct: 136 SFKENDARTCGEEIRRSF-------YIDISVEKIIGKFLDHPVR 172


>gi|200004057|ref|YP_002221391.1| putative ribosomal protein S4 [Blastocystis sp. NandII]
 gi|198385479|gb|ACH86072.1| putative ribosomal protein S4 [Blastocystis sp. NandII]
          Length = 1017

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 6/148 (4%)

Query: 37  HGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE-ADRSRGDTSHNLISFLESR 95
           +G +  SK  Y     + K +    Y  I+++  R       D              E R
Sbjct: 33  NGLKNNSKGKYIYHYKKLKIENLYNYKFINKQILRKYLAIYNDNEFKLILKRNYLNFEKR 92

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           LD  +Y A FV +I+AA+ F+    V VN + +   +Y  K+ D++E+         ++ 
Sbjct: 93  LDFNLYHANFVNSIYAAKFFITKGCVFVNKKKITSFNYILKKNDIVEINSIFYNY--IIN 150

Query: 156 ASQLAERDVPEY---ISVNHDNMVATFV 180
                + +   Y   + +++      F+
Sbjct: 151 NISFNDFNKKNYIRNLEIDYKTFSFIFL 178


>gi|303228097|emb|CAR65268.1| ribosomal protein S4 protein [Caduciella guangdongensis]
          Length = 46

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + KI RR+G       K+P
Sbjct: 1  MSRYRGPRVKIIRRLGTLPGLTNKTP 26


>gi|312137107|ref|YP_004004444.1| ssu ribosomal protein s4p [Methanothermus fervidus DSM 2088]
 gi|311224826|gb|ADP77682.1| SSU ribosomal protein S4P [Methanothermus fervidus DSM 2088]
          Length = 173

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 30/171 (17%)

Query: 21  GRPKSPVNTRSYGP----GLHGQRRKSKPSYFGLQLRA------------KQKMKKYYGD 64
           G PK P       P        +  K     +GL+ +             +++ +K +G 
Sbjct: 2   GHPKKPRKKYDTPPHPWDAQRIKEEKKLVKKYGLKNKKEIWKAETMVRRYRREARKLFGM 61

Query: 65  ISEK-------KFRSIFKEADRSRGDTSHNLISF-----LESRLDTIVYRAKFVPTIFAA 112
             E          + ++K     +     +++       L  RL T+VY      TI  A
Sbjct: 62  PEEHAKVESKQLMKHLWKLGLLDKDAELRDILDLTVEDVLRRRLQTMVYEKGLARTIKQA 121

Query: 113 RQFVNHRHVLVNGRSVNIGSYRC--KEGDVIEVKQKSKQLASVLEASQLAE 161
           RQ + H H+ ++G  V    +    +E D I+    S     +    + AE
Sbjct: 122 RQMIVHGHIAIDGTRVRSPGHIVKREEEDKIDFYPHSPMKEIIKSEKEKAE 172


>gi|3025872|gb|AAC26507.1| ribosomal protein S4 [Brassica napus]
          Length = 362

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 13/136 (9%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           +QL+  +K+  ++GD+   +     K                 E+R D I  R  F+ TI
Sbjct: 67  IQLQTTRKLPLFHGDLPITEMHRGTKRTSYIP------FPLNPETRFDVIPLRLHFLETI 120

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
             ARQ ++HR V VN   V+I   +   GD+I      ++  +++   ++       Y  
Sbjct: 121 PQARQPISHRRVCVNKGMVSITHLKLSHGDII----SFQENNAIIRGEEIRRSF---YKE 173

Query: 170 VNHDNMVATFVRIPSS 185
           ++ + ++   +  P  
Sbjct: 174 ISVEKIIGKLLHQPLR 189


>gi|294337184|emb|CAQ52742.1| ribosomal protein S4 [Isodrepanium lentulum]
 gi|303228179|emb|CAR65309.1| ribosomal protein S4 protein [Porotrichum madagassum]
          Length = 46

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + KI RR+G       K+P    S
Sbjct: 1  MSRYRGPRVKIIRRLGTLPGLTNKTPQLKSS 31


>gi|126952120|gb|ABO28170.1| ribosomal protein S4 [Microcitrus australis]
 gi|126952124|gb|ABO28172.1| ribosomal protein S4 [Microcitrus inodora]
          Length = 59

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K S      R K K+  
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSVKKSQISNSFRRKTKIAF 56


>gi|126952162|gb|ABO28191.1| ribosomal protein S4 [Toona ciliata]
          Length = 59

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRA-KQKMK 59
          MS+    + K  RR+G       K P      G  L  Q R  K S      R  KQK++
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDLRNQSRSGKKSQISYSFRKEKQKLR 56

Query: 60 KY 61
           +
Sbjct: 57 FH 58


>gi|323149057|ref|YP_004222821.1| ribosomal protein S4 [Vigna radiata]
 gi|308206763|gb|ADO19900.1| ribosomal protein S4 [Vigna radiata]
          Length = 346

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 27/176 (15%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           ++ RR+      R K     R   P         K     +Q +  +K+  ++ D+   +
Sbjct: 24  RVLRRL------RNKKRSLKRKISP--------RKNMNSYIQSQTTRKLPLFHADLPITE 69

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                +            LI   E+R D I  R  F  T+  ARQ ++HR V VN R V+
Sbjct: 70  MHRGTERTSYIP------LILNPETRSDVIPVRLHFRETLPQARQPISHRRVCVNNRIVS 123

Query: 130 IGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
           I   +   GD+I  ++   ++                YI ++ D ++  F+  P  
Sbjct: 124 ITRLKVSHGDLISFQENDARIRGEEIRRSF-------YIEISVDKIIGKFLDHPVR 172


>gi|238617510|gb|ACR46887.1| ribosomal protein S4 [Centaurea toletana]
          Length = 32

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|301154078|emb|CAR31437.1| ribosomal protein S4 protein [Thamnobryum cataractarum]
          Length = 43

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSS 31


>gi|189342340|gb|ACD91749.1| ribosomal protein S4 [Cousinia gigantolepis]
          Length = 45

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTR 30
          MS+    + K  RR+G       K P   R
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRPREGR 30


>gi|257388630|ref|YP_003178403.1| 30S ribosomal protein S4P [Halomicrobium mukohataei DSM 12286]
 gi|257170937|gb|ACV48696.1| ribosomal protein S4 [Halomicrobium mukohataei DSM 12286]
          Length = 173

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
           LE RL T+VYR  +  T   ARQF++H H+++    V     
Sbjct: 101 LERRLQTVVYRKGYANTPEQARQFISHGHIVLGDARVTRPGM 142


>gi|255590109|ref|XP_002535173.1| Mitochondrial ribosomal protein S4, putative [Ricinus communis]
 gi|223523829|gb|EEF27209.1| Mitochondrial ribosomal protein S4, putative [Ricinus communis]
          Length = 276

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 7/98 (7%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
            +   E+R D I  R  F  TI  ARQ ++HR V VN   V+I   +   GD+I  K   
Sbjct: 13  FLLNPETRSDVIPVRLHFCETIPQARQPISHRRVCVNNGMVSITHLKVSHGDIISFKAND 72

Query: 148 KQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
            ++       +  E     YI ++ + ++  F+  P  
Sbjct: 73  ARI-------RGEEIRRFFYIEISVEKIIGKFLDHPVR 103


>gi|162605936|ref|XP_001713483.1| 40S ribosomal protein S9 [Guillardia theta]
 gi|13794408|gb|AAK39785.1|AF083031_149 40S ribosomal protein S9 [Guillardia theta]
          Length = 181

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 3/113 (2%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGD 83
            N R          +    +   L L+     +K   +   K+ ++              
Sbjct: 37  KNKREVWRVQLALSKIRSSARLLLTLQENDPRRKIQANALIKRLKNYGILSDNNTNLESV 96

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            S  +  FLE RL T+V++     +I  AR  V H+H+ VN + V+I S   K
Sbjct: 97  LSLKIQDFLERRLQTLVFKNGLARSIHHARILVRHKHISVNDQLVDIPSVMVK 149


>gi|15678065|ref|NP_275179.1| 30S ribosomal protein S4P [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|6647786|sp|O26142|RS4_METTH RecName: Full=30S ribosomal protein S4P
 gi|2621071|gb|AAB84543.1| ribosomal protein S9 (E.coli ) [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 171

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
           E  +        +   L  RL T+V++     T+  ARQ V H H+ ++GR ++   Y  
Sbjct: 85  EGAKLEDVLDLTVEDVLRRRLQTLVHKRGLARTVKEARQMVIHGHIALDGRKIDAPGYIV 144

Query: 136 KEGDV 140
           K G+ 
Sbjct: 145 KRGEE 149


>gi|304314285|ref|YP_003849432.1| 30S ribosomal protein S4p [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587744|gb|ADL58119.1| 30S ribosomal protein S4p [Methanothermobacter marburgensis str.
           Marburg]
          Length = 171

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           L  RL T+V++     T+  ARQ V H H+ ++GR ++   Y  K G+ 
Sbjct: 101 LRRRLQTLVHKRGLARTVNEARQMVVHGHIALDGRKIDAPGYIVKRGEE 149


>gi|296124609|gb|ADG95965.1| ribosomal protein S4 [Lilium bosniacum]
          Length = 44

 Score = 45.7 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 10/24 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPK 24
          MS+    + K  RR+G       K
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSK 24


>gi|303228181|emb|CAR65310.1| ribosomal protein S4 protein [Shevockia inunctocarpa]
          Length = 45

 Score = 45.7 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    +
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSN 31


>gi|238617452|gb|ACR46858.1| ribosomal protein S4 [Centaurea aetolica]
          Length = 32

 Score = 45.7 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|296124607|gb|ADG95964.1| ribosomal protein S4 [Lilium cattaniae]
          Length = 45

 Score = 45.7 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP 26


>gi|261884951|ref|ZP_06008990.1| 30S ribosomal protein S4 [Campylobacter fetus subsp. venerealis
          str. Azul-94]
          Length = 51

 Score = 45.7 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 1  MSKRESSKHKIDRRIGENLW------GRPKSPVNTRSYGPGLHGQRR 41
          M++       +D  +G +L          KS ++TR Y PG  GQR+
Sbjct: 1  MARYRGPVVMLDIPLGVSLAIKCETILAGKSALDTRPYAPGQRGQRK 47


>gi|258573477|ref|XP_002540920.1| 40S ribosomal protein S9 [Uncinocarpus reesii 1704]
 gi|237901186|gb|EEP75587.1| 40S ribosomal protein S9 [Uncinocarpus reesii 1704]
          Length = 188

 Score = 45.7 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 99  DFLERRLQTCVYRLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFIVR 145


>gi|303228147|emb|CAR65293.1| ribosomal protein S4 protein [Neckera neckeroides]
          Length = 46

 Score = 45.7 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + +I RR+G       K+P
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTP 26


>gi|57231031|gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis]
          Length = 320

 Score = 45.3 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 22/163 (13%)

Query: 23  PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82
            K  +  + Y           +     +Q +  +K+  ++GD+   +     +       
Sbjct: 32  KKRSIKRKIYP---------RENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP- 81

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
                     E+R D I  R  F  TI  ARQ ++HR V VN   V+I   +   GD+I 
Sbjct: 82  -----FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLIS 136

Query: 143 VKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPSS 185
            ++   +                 YI ++ + ++  F+  P  
Sbjct: 137 FQENDARTRGEEIRRSF-------YIDISVEKIIGKFLDHPVR 172


>gi|260576849|ref|ZP_05844832.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2]
 gi|259020886|gb|EEW24199.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2]
          Length = 100

 Score = 45.3 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 8/92 (8%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           N  +    RLD  +++A+F  T   A   V+  H+ +NG  V    +    GDV+     
Sbjct: 5   NPAALPRQRLDLWLWQARFFKTRALAAAVVSSGHLRLNGAKVGKPGHGVTPGDVLGF--V 62

Query: 147 SKQLASVLEASQLAERDVPE------YISVNH 172
                 ++    LA+R  P       Y+ ++ 
Sbjct: 63  QADRLRLVRVLGLAQRRGPSIEAQTLYLDLDA 94


>gi|145932464|ref|YP_001165376.1| ribosomal protein S4 [Phytophthora ramorum]
 gi|110169662|gb|ABG54127.1| ribosomal protein S4 [Phytophthora ramorum]
 gi|188038025|gb|ACD46643.1| ribosomal protein S4 [Phytophthora ramorum]
          Length = 153

 Score = 45.3 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 7   SKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSY-------FGLQLRAKQKMK 59
            ++KI  +   N+                   + R  K          F  +L  KQ+ +
Sbjct: 6   PRNKICFQNNRNIHKNLNLLKLKAKKWNLFKKKLRYRKEIKPEKRKKFFQKRLFEKQQFR 65

Query: 60  KYYGDISEKKFRSIFKEADRS--RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQF 115
            +YG I E + +++FK+  +   + +   N +  LESRLD  + R K V TIF A+Q 
Sbjct: 66  NFYGCIHEYQLKNLFKKLSKKDNKINIFKNFVVLLESRLDINLVRLKLVKTIFQAKQL 123


>gi|303228129|emb|CAR65284.1| ribosomal protein S4 protein [Neckera crenulata]
          Length = 46

 Score = 45.3 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSS 31


>gi|303228115|emb|CAR65277.1| ribosomal protein S4 protein [Homaliodendron flabellatum]
 gi|303228117|emb|CAR65278.1| ribosomal protein S4 protein [Homaliodendron flabellatum]
 gi|303228119|emb|CAR65279.1| ribosomal protein S4 protein [Homaliodendron scalpellifolium]
          Length = 46

 Score = 45.3 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + +I RR+G       K+P
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTP 26


>gi|189342402|gb|ACD91780.1| ribosomal protein S4 [Cousinia albertoregelia]
          Length = 45

 Score = 45.3 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|68144086|gb|AAY86080.1| small ribosomal protein 4 [Lagarostrobos franklinii]
 gi|68144088|gb|AAY86081.1| small ribosomal protein 4 [Lagarostrobos franklinii]
          Length = 57

 Score = 45.3 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 161 ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +  VP ++++          +I  +   +   + +   LV+E++SR
Sbjct: 13  KHKVPFHLTLYSSQYKGVVNQIIDN---ISIGLDINELLVIEYFSR 55


>gi|126952106|gb|ABO28163.1| ribosomal protein S4 [Glycosmis mauritiana]
          Length = 59

 Score = 45.3 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 19/60 (31%), Gaps = 4/60 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          MS+    + K  RR+G       K P      G     Q R  K        R K K+  
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSDFRNQSRSRKKISISNSFRRKTKIAF 56


>gi|238617454|gb|ACR46859.1| ribosomal protein S4 [Centaurea argecillensis]
 gi|238617456|gb|ACR46860.1| ribosomal protein S4 [Centaurea argecillensis]
 gi|238617458|gb|ACR46861.1| ribosomal protein S4 [Centaurea argecillensis]
 gi|238617460|gb|ACR46862.1| ribosomal protein S4 [Centaurea argecillensis]
 gi|238617462|gb|ACR46863.1| ribosomal protein S4 [Centaurea argecillensis]
 gi|238617464|gb|ACR46864.1| ribosomal protein S4 [Centaurea argecillensis]
 gi|238617466|gb|ACR46865.1| ribosomal protein S4 [Centaurea argecillensis]
 gi|238617468|gb|ACR46866.1| ribosomal protein S4 [Centaurea cephalariifolia]
 gi|238617470|gb|ACR46867.1| ribosomal protein S4 [Centaurea cephalariifolia]
 gi|238617474|gb|ACR46869.1| ribosomal protein S4 [Centaurea josiae]
 gi|238617476|gb|ACR46870.1| ribosomal protein S4 [Centaurea josiae]
 gi|238617478|gb|ACR46871.1| ribosomal protein S4 [Centaurea kandavanensis]
 gi|238617480|gb|ACR46872.1| ribosomal protein S4 [Centaurea litardierei]
 gi|238617482|gb|ACR46873.1| ribosomal protein S4 [Centaurea litardierei]
 gi|238617484|gb|ACR46874.1| ribosomal protein S4 [Centaurea nana]
 gi|238617486|gb|ACR46875.1| ribosomal protein S4 [Centaurea nana]
 gi|238617488|gb|ACR46876.1| ribosomal protein S4 [Centaurea ornata]
 gi|238617490|gb|ACR46877.1| ribosomal protein S4 [Centaurea ornata]
 gi|238617492|gb|ACR46878.1| ribosomal protein S4 [Centaurea podospermifolia]
 gi|238617494|gb|ACR46879.1| ribosomal protein S4 [Centaurea podospermifolia]
 gi|238617496|gb|ACR46880.1| ribosomal protein S4 [Centaurea raphanina]
 gi|238617498|gb|ACR46881.1| ribosomal protein S4 [Centaurea toletana]
 gi|238617500|gb|ACR46882.1| ribosomal protein S4 [Centaurea toletana]
 gi|238617502|gb|ACR46883.1| ribosomal protein S4 [Centaurea toletana]
 gi|238617504|gb|ACR46884.1| ribosomal protein S4 [Centaurea toletana]
 gi|238617506|gb|ACR46885.1| ribosomal protein S4 [Centaurea toletana]
 gi|238617508|gb|ACR46886.1| ribosomal protein S4 [Centaurea toletana]
 gi|238617512|gb|ACR46888.1| ribosomal protein S4 [Centaurea toletana]
 gi|238617514|gb|ACR46889.1| ribosomal protein S4 [Centaurea toletana]
          Length = 32

 Score = 45.3 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|294337170|emb|CAQ52735.1| ribosomal protein S4 [Homalothecium sericeum]
 gi|303228191|emb|CAR65315.1| ribosomal protein S4 protein [Thamnobryum pandum]
          Length = 46

 Score = 45.3 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNT 29
          MS+    + +I RR+G       K+P   
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLK 29


>gi|2500406|sp|Q25555|RS9_NAEFO RecName: Full=40S ribosomal protein S9
 gi|1353747|gb|AAB01779.1| 40s ribosomal protein S9 homolog [Naegleria fowleri]
          Length = 186

 Score = 45.3 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
           K  ++      G +G + K +       L   +K  ++   + E   +  F+ A   R  
Sbjct: 23  KERMDRELKMCGKYGLKNKQEIWRLQYYLARARKTARHLLTLPEDDMKRQFEGAALLRRM 82

Query: 84  TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           T   L+                  LE RL T+V +     +I  ARQ +  RH+ V  ++
Sbjct: 83  TRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQRHIRVGKQT 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +      
Sbjct: 143 VNVPSFIVRVDSEKHINMSPFS 164


>gi|291334095|gb|ADD93767.1| putative S4 domain protein [uncultured marine bacterium
           MedDCM-OCT-S05-C222]
          Length = 222

 Score = 45.3 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
             L  RL   VY      ++  ARQFV H  +++  + V I SY
Sbjct: 102 DILNRRLQAQVYYKGLAISMKQARQFVTHGKIVIGNQKVTIPSY 145


>gi|294337072|emb|CAQ52686.1| ribosomal protein S4 [Anomodon viticulosus]
 gi|294337076|emb|CAQ52688.1| ribosomal protein S4 [Baldwiniella kealeensis]
 gi|294337078|emb|CAQ52689.1| ribosomal protein S4 [Bissetia lingulata]
 gi|294337080|emb|CAQ52690.1| ribosomal protein S4 [Boulaya mittenii]
 gi|294337092|emb|CAQ52696.1| ribosomal protein S4 [Camptochaete arbuscula var. tumida]
 gi|294337102|emb|CAQ52701.1| ribosomal protein S4 [Dendroalsia abietina]
 gi|294337108|emb|CAQ52704.1| ribosomal protein S4 [Dixonia thamnioides]
 gi|294337110|emb|CAQ52705.1| ribosomal protein S4 [Dolichomitriopsis diversiformis]
 gi|294337134|emb|CAQ52717.1| ribosomal protein S4 [Haplohymenium triste]
 gi|294337146|emb|CAQ52723.1| ribosomal protein S4 [Hildebrandtiella guyanensis]
 gi|294337156|emb|CAQ52728.1| ribosomal protein S4 [Homalia trichomanoides]
 gi|294337162|emb|CAQ52731.1| ribosomal protein S4 [Homaliadelphus targionianus]
 gi|294337186|emb|CAQ52743.1| ribosomal protein S4 [Isothecium myosuroides]
 gi|294337190|emb|CAQ52745.1| ribosomal protein S4 [Lembophyllum divulsum]
 gi|294337196|emb|CAQ52748.1| ribosomal protein S4 [Leucodon sciuroides]
 gi|294337198|emb|CAQ52749.1| ribosomal protein S4 [Limbella tricostata]
 gi|294337200|emb|CAQ52750.1| ribosomal protein S4 [Lindbergia brachyptera]
 gi|294337206|emb|CAQ52752.1| ribosomal protein S4 [Meteorium polytrichum]
 gi|294337250|emb|CAQ52774.1| ribosomal protein S4 [Prionodon densus]
 gi|294337261|emb|CAQ52779.1| ribosomal protein S4 [Rigodium pseudothuidium]
 gi|294337269|emb|CAQ52783.1| ribosomal protein S4 [Taiwanobryum speciosum]
 gi|294337273|emb|CAQ52785.1| ribosomal protein S4 [Thamnobryum alopecurum]
 gi|294337281|emb|CAQ52789.1| ribosomal protein S4 [Toloxis imponderosa]
 gi|294337285|emb|CAQ52791.1| ribosomal protein S4 [Tripterocladium leucocladulum]
 gi|294337287|emb|CAQ52792.1| ribosomal protein S4 [Weymouthia cochlearifolia]
 gi|294337289|emb|CAQ52793.1| ribosomal protein S4 [Weymouthia mollis]
 gi|301154076|emb|CAR31436.1| ribosomal protein S4 protein [Porotrichopsis flacca]
 gi|301154080|emb|CAR31438.1| ribosomal protein S4 protein [Thamnobryum fernandesii]
 gi|301154082|emb|CAR31439.1| ribosomal protein S4 protein [Thamnobryum neckeroides]
 gi|301154084|emb|CAR31440.1| ribosomal protein S4 protein [Thamnobryum rudolphianum]
 gi|301154086|emb|CAR31441.1| ribosomal protein S4 protein [Thamnobryum speciosum]
 gi|301154088|emb|CAR31442.1| ribosomal protein S4 protein [Thamnobryum angustifolium]
 gi|301154090|emb|CAR31443.1| ribosomal protein S4 protein [Thamnobryum alopecurum f.
          protensum]
 gi|303228099|emb|CAR65269.1| ribosomal protein S4 protein [Caduciella mariei]
 gi|303228101|emb|CAR65270.1| ribosomal protein S4 protein [Chileobryon callicostelloides]
 gi|303228105|emb|CAR65272.1| ribosomal protein S4 protein [Curvicladium kurzii]
 gi|303228107|emb|CAR65273.1| ribosomal protein S4 protein [Echinodium hispidum]
 gi|303228111|emb|CAR65275.1| ribosomal protein S4 protein [Himantocladium cyclophyllum]
 gi|303228113|emb|CAR65276.1| ribosomal protein S4 protein [Himantocladium implanum]
 gi|303228137|emb|CAR65288.1| ribosomal protein S4 protein [Neckera himalayana]
 gi|303228149|emb|CAR65294.1| ribosomal protein S4 protein [Neckera polyclada]
 gi|303228157|emb|CAR65298.1| ribosomal protein S4 protein [Himantocladium warburgii]
 gi|303228161|emb|CAR65300.1| ribosomal protein S4 protein [Neckeropsis disticha]
 gi|303228163|emb|CAR65301.1| ribosomal protein S4 protein [Neckeropsis fimbriata]
 gi|303228165|emb|CAR65302.1| ribosomal protein S4 protein [Neckeropsis gracilenta]
 gi|303228167|emb|CAR65303.1| ribosomal protein S4 protein [Neckeropsis undulata]
 gi|303228173|emb|CAR65306.1| ribosomal protein S4 protein [Pinnatella foreauana]
 gi|303228183|emb|CAR65311.1| ribosomal protein S4 protein [Thamnobryum alopecurum]
 gi|303228185|emb|CAR65312.1| ribosomal protein S4 protein [Thamnobryum ellipticum]
 gi|303228187|emb|CAR65313.1| ribosomal protein S4 protein [Thamnobryum fasciculatum]
 gi|303228189|emb|CAR65314.1| ribosomal protein S4 protein [Thamnobryum negrosense]
 gi|303228195|emb|CAR65317.1| ribosomal protein S4 protein [Touwia laticostata]
          Length = 46

 Score = 45.3 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLKSS 31


>gi|294337104|emb|CAQ52702.1| ribosomal protein S4 [Dichelodontium nitidum]
          Length = 46

 Score = 45.3 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + KI RR+G       K P    S
Sbjct: 1  MSRYRGPRVKIIRRLGTLPGLTNKIPQLKSS 31


>gi|302674230|ref|XP_003026800.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8]
 gi|300100484|gb|EFI91897.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8]
          Length = 335

 Score = 44.9 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 34/65 (52%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           + + +E R+D +++R+   P+++ AR+ V H  V +NG+     + R   GD++ V    
Sbjct: 127 MFADVERRIDVLIFRSCLAPSVYEARRLVVHGKVKLNGKQHQNANTRLAPGDMVTVDPAH 186

Query: 148 KQLAS 152
            +   
Sbjct: 187 IKFLR 191


>gi|294337180|emb|CAQ52740.1| ribosomal protein S4 [Hypnodendron vitiense]
          Length = 46

 Score = 44.9 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGALPGLTNKTPQLKSS 31


>gi|296284815|ref|ZP_06862813.1| S4 domain-containing protein [Citromicrobium bathyomarinum JL354]
          Length = 100

 Score = 44.9 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  + R +FV    AAR+ V   H+ VNG  V   S     GDV+ + + S     V
Sbjct: 1   MRLDLALCRLRFVRARSAARRLVESGHLRVNGTRVERVSREITVGDVLTIPRTSG--VLV 58

Query: 154 LEASQLAERDVPE 166
           +    L ER  P 
Sbjct: 59  IRIEALPERRGPP 71


>gi|284165824|ref|YP_003404103.1| ribosomal protein S4 [Haloterrigena turkmenica DSM 5511]
 gi|284015479|gb|ADB61430.1| ribosomal protein S4 [Haloterrigena turkmenica DSM 5511]
          Length = 173

 Score = 44.9 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
             LE RL T+VYR     T   ARQ++ H H+++  +   + SY     + 
Sbjct: 100 DILERRLQTVVYRNGLANTTQQARQYIIHGHIVIGDQRHRVPSYVVDVDEE 150


>gi|189342310|gb|ACD91734.1| ribosomal protein S4 [Cousinia linczewskii]
          Length = 45

 Score = 44.9 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  RR+G       K P    S G  L  Q R  K S + 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----SAGSDLRNQSRSGKKSQYR 45


>gi|303228193|emb|CAR65316.1| ribosomal protein S4 protein [Thamnobryum pumilum]
          Length = 46

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLRSS 31


>gi|189342222|gb|ACD91690.1| ribosomal protein S4 [Cousinia gaubae]
          Length = 44

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|296124604|gb|ADG95963.1| ribosomal protein S4 [Lilium jankae]
          Length = 44

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 10/24 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPK 24
          MS+    + K  RR+G       K
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSK 24


>gi|294337174|emb|CAQ52737.1| ribosomal protein S4 [Hookeria lucens]
          Length = 46

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + KI RR+G       K P    S
Sbjct: 1  MSRYRGPRVKIIRRLGVLPGLTNKIPQLKSS 31


>gi|307109577|gb|EFN57815.1| hypothetical protein CHLNCDRAFT_56085 [Chlorella variabilis]
          Length = 192

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E +        ++     +      LE RL T+V++     +I  AR  +  R
Sbjct: 83  YRYGFLDESQ--------NKLDYVLALTPADVLERRLQTLVFKLGLAKSIHHARVLIRQR 134

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143
           H+ V  + VNI S+  +      +
Sbjct: 135 HIRVGKQIVNIPSFMVRVDSQKHI 158


>gi|289580105|ref|YP_003478571.1| ribosomal protein S4 [Natrialba magadii ATCC 43099]
 gi|289529658|gb|ADD04009.1| ribosomal protein S4 [Natrialba magadii ATCC 43099]
          Length = 173

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 24/49 (48%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           LE RL T+ YR     T   ARQF+ H HV+V  +   + SY     + 
Sbjct: 102 LERRLQTVAYRKGLANTPQQARQFIIHGHVVVGDQRHRVPSYVVDVDEE 150


>gi|126952156|gb|ABO28188.1| ribosomal protein S4 [Skimmia anquetilia]
          Length = 59

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 4/58 (6%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKM 58
          MS+    + K  RR+G       K P      G     Q R  K        R K K+
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP----RAGSNFRNQSRSGKKISISNSFRRKTKI 54


>gi|296124598|gb|ADG95960.1| ribosomal protein S4 [Lilium bosniacum]
          Length = 45

 Score = 44.9 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPV 27
          MS+    + K  RR+G       K P 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRPK 27


>gi|329350650|gb|AEB91334.1| ribosomal protein S4 [Cousinia pentacanthoides]
          Length = 44

 Score = 44.9 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|126952053|gb|ABO28138.1| ribosomal protein S4 [Citrus latipes]
          Length = 59

 Score = 44.5 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP 26


>gi|11466324|ref|NP_051152.1| ribosomal protein S4 [Cafeteria roenbergensis]
 gi|6180106|gb|AAF05803.1|AF193903_26 ribosomal protein S4 [Cafeteria roenbergensis]
          Length = 1641

 Score = 44.5 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 40  RRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA-DRSRGDTSHNLISFLESRLDT 98
           R   + + + ++L  K+    +Y  + + K R+ FK   ++SR     N     E+RLD 
Sbjct: 82  RFYLQKNLYKVELYRKKGFLSFYRKLDDSKIRNWFKHQYNKSRQFKIINFFKMFETRLDV 141

Query: 99  IVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           I +R K  PTIF A  F+  R + +N       SYR + GD+I  
Sbjct: 142 ISFRMKLTPTIFLANMFIKTRGLQINYGLKKEPSYRLQIGDLISF 186


>gi|328766555|gb|EGF76609.1| hypothetical protein BATDEDRAFT_33834 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 188

 Score = 44.5 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%)

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +E  +        +   LE RL T V++     +I  AR  +  RH+ V  + V+I S+ 
Sbjct: 86  EEKAKLDYVLGLRVEDLLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVDIPSFI 145

Query: 135 CK 136
            +
Sbjct: 146 VR 147


>gi|189342368|gb|ACD91763.1| ribosomal protein S4 [Cousinia alepideae]
          Length = 44

 Score = 44.5 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|6440857|dbj|BAA78592.1| 40S ribosomal protein S9 [Chlamydomonas sp. HS-5]
          Length = 192

 Score = 44.5 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
           +A  +    YG ++E +        D+     +     FLE RL T+V++     +I  A
Sbjct: 76  QALMRRMYKYGLLNETQ--------DKLDYVLALQPNDFLERRLQTVVFKQGLAKSIHHA 127

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           R  +   H+ V  + VNI S+  +      V
Sbjct: 128 RVLIKQNHIRVGKQVVNIPSFMVRVDSQKHV 158


>gi|290559362|gb|EFD92695.1| ribosomal protein S4 [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 177

 Score = 44.5 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 31/54 (57%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           N+ + L+ RL T V   +   +I  ARQ + HRH+ V+G+ ++  SY  K+ + 
Sbjct: 97  NIENLLDRRLQTFVLNKEMARSIREARQIITHRHITVDGKLIDSPSYMVKKDEE 150


>gi|189342422|gb|ACD91790.1| ribosomal protein S4 [Cousinia lachnosphaera]
          Length = 43

 Score = 44.5 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|156084614|ref|XP_001609790.1| 40S ribosomal subunit protein S9 [Babesia bovis T2Bo]
 gi|154797042|gb|EDO06222.1| 40S ribosomal subunit protein S9, putative [Babesia bovis]
          Length = 182

 Score = 44.5 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 3/120 (2%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA---DRSRGD 83
            N R      +   +    + + L L  K   +++ GD   ++            +    
Sbjct: 37  KNKREVWRVQYVLSKIRSAARYLLTLDDKDVKRQFQGDALLRRMVRYGLMGENERKLDFV 96

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
               L   +E RL T V++     +I  AR  +  RH+ V  + V+I S+  +      +
Sbjct: 97  LGLTLNKMMERRLQTKVFKLGLAKSIHHARCMIRQRHIRVGKQIVDIPSFMVRVDSEKHI 156


>gi|303228171|emb|CAR65305.1| ribosomal protein S4 protein [Pinnatella anacamptolepis]
          Length = 46

 Score = 44.5 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + +I RR+G       K+ 
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTS 26


>gi|292656900|ref|YP_003536797.1| 30S ribosomal protein S4 [Haloferax volcanii DS2]
 gi|291372709|gb|ADE04936.1| ribosomal protein S4 [Haloferax volcanii DS2]
          Length = 175

 Score = 44.5 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 25/53 (47%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           +   LE R  T+ YR     T   ARQF+ H HV V+G    + S + +  + 
Sbjct: 99  VTDILERRFQTVAYRKGLAQTPQQARQFIVHGHVTVDGARTTVPSRKVEVDEE 151


>gi|227496317|ref|ZP_03926613.1| hemolysin A [Actinomyces urogenitalis DSM 15434]
 gi|226834155|gb|EEH66538.1| hemolysin A [Actinomyces urogenitalis DSM 15434]
          Length = 287

 Score = 44.5 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            R+D+ + R     +   A Q V   HV ++G  V   + +      IEV
Sbjct: 5   IRIDSELVRRGLARSRTHAAQLVTDGHVTLDGAVVTKPARQVNPAQAIEV 54


>gi|71000429|ref|XP_754909.1| 40S ribosomal protein S9 [Aspergillus fumigatus Af293]
 gi|66852546|gb|EAL92871.1| 40S ribosomal protein S9 [Aspergillus fumigatus Af293]
 gi|159127923|gb|EDP53038.1| 40S ribosomal protein S9 [Aspergillus fumigatus A1163]
          Length = 237

 Score = 44.5 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ SY  +
Sbjct: 147 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 193


>gi|296124596|gb|ADG95959.1| ribosomal protein S4 [Lilium pyrenaicum var. albanicum]
 gi|296124600|gb|ADG95961.1| ribosomal protein S4 [Lilium candidum]
 gi|296124602|gb|ADG95962.1| ribosomal protein S4 [Lilium chalcedonicum]
 gi|296124611|gb|ADG95966.1| ribosomal protein S4 [Lilium pyrenaicum subsp. carniolicum]
 gi|296124613|gb|ADG95967.1| ribosomal protein S4 [Lilium pyrenaicum subsp. carniolicum]
          Length = 45

 Score = 44.1 bits (103), Expect = 0.010,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP 26


>gi|303228177|emb|CAR65308.1| ribosomal protein S4 protein [Pinnatella taiwanensis]
          Length = 46

 Score = 44.1 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGPTNKTPQLKSS 31


>gi|68069555|ref|XP_676689.1| 40S ribosomal subunit protein S9 [Plasmodium berghei strain ANKA]
 gi|56496498|emb|CAH95070.1| 40S ribosomal subunit protein S9, putative [Plasmodium berghei]
          Length = 168

 Score = 44.1 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80
            N R      +   +    + + L L  K   + + G   E   R + ++       ++ 
Sbjct: 16  KNKREIWRVQYLLAKIRSAARYLLTLDEKSPKRIFQG---EALLRRMVRQGLLGENEEKL 72

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
                  L   LE RL T V++     ++  AR  +  RH+ V  + V+I S+  +    
Sbjct: 73  DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRIDSE 132

Query: 141 IEV 143
             +
Sbjct: 133 KHI 135


>gi|189342268|gb|ACD91713.1| ribosomal protein S4 [Cousinia lomakini]
          Length = 38

 Score = 44.1 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|56752913|gb|AAW24668.1| SJCHGC07042 protein [Schistosoma japonicum]
          Length = 234

 Score = 44.1 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + ++  +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN   
Sbjct: 86  LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 145

Query: 133 YRCKEGDVIEVKQKSKQLASVLEASQLA 160
           +  +      ++  S      + A Q+A
Sbjct: 146 FMVRLDSGKHIELPSHTAPLWVAAPQVA 173


>gi|189342184|gb|ACD91671.1| ribosomal protein S4 [Saussurea elegans]
 gi|189342186|gb|ACD91672.1| ribosomal protein S4 [Saussurea maximowiczii]
 gi|189342188|gb|ACD91673.1| ribosomal protein S4 [Jurinea albicaulis]
 gi|189342190|gb|ACD91674.1| ribosomal protein S4 [Jurinea humilis]
          Length = 45

 Score = 44.1 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  RR+G       K P      G  L  Q R  K S + 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----KAGSDLRNQSRSGKKSQYR 45


>gi|238617472|gb|ACR46868.1| ribosomal protein S4 [Centaurea granatensis]
          Length = 32

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|50344472|emb|CAH04322.1| S9e ribosomal protein [Meladema coriacea]
          Length = 193

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDENRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFIVRLDSQKHIDFSLKS 164


>gi|302505130|ref|XP_003014786.1| hypothetical protein ARB_07347 [Arthroderma benhamiae CBS 112371]
 gi|291178092|gb|EFE33883.1| hypothetical protein ARB_07347 [Arthroderma benhamiae CBS 112371]
          Length = 247

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 157 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 200


>gi|189342312|gb|ACD91735.1| ribosomal protein S4 [Cousinia smirnowii]
 gi|189342356|gb|ACD91757.1| ribosomal protein S4 [Cousinia hypoleuca]
          Length = 45

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  RR+G       K P      G  L  Q R  K S + 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----XAGSDLRNQSRSGKKSQYR 45


>gi|67595276|ref|XP_665990.1| 40S ribosomal subunit protein S9 [Cryptosporidium hominis TU502]
 gi|126654511|ref|XP_001388426.1| 40S ribosomal subunit protein S9 [Cryptosporidium parvum Iowa II]
 gi|54656881|gb|EAL35760.1| 40S ribosomal subunit protein S9 [Cryptosporidium hominis]
 gi|126117366|gb|EAZ51466.1| 40S ribosomal subunit protein S9, putative [Cryptosporidium parvum
           Iowa II]
          Length = 109

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%)

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +E  +        +  FLE RL T V++     +I  AR  +   H+ V  + V++ S+ 
Sbjct: 9   EEERKLDYVLGLTISKFLERRLQTRVFKLGLAKSIHHARVLIRQNHIRVGRQIVDVPSFM 68

Query: 135 CK 136
            +
Sbjct: 69  VR 70


>gi|189342462|gb|ACD91810.1| ribosomal protein S4 [Cousinia kokanica]
 gi|189342464|gb|ACD91811.1| ribosomal protein S4 [Cousinia xanthacantha]
          Length = 44

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|27260898|gb|AAN86049.1| ribosomal protein S9 [Spodoptera frugiperda]
          Length = 113

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G + EK+ +  +    +           FLE RL T V++A    +I  AR  +  RH+ 
Sbjct: 5   GVLDEKQMKLDYVLGLKIED--------FLERRLQTQVFKAGLAKSIHHARILIRQRHIR 56

Query: 123 VNGRSVNIGSYRCK 136
           V  + VNI S+  +
Sbjct: 57  VRKQVVNIPSFIVR 70


>gi|294337172|emb|CAQ52736.1| ribosomal protein S4 [Hookeria acutifolia]
          Length = 46

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + KI RR+G       K P    S
Sbjct: 1  MSRYRGPRVKIVRRLGVLPGLTNKIPQLKSS 31


>gi|294337098|emb|CAQ52699.1| ribosomal protein S4 [Cryptoleptodon longisetus]
 gi|294337192|emb|CAQ52746.1| ribosomal protein S4 [Leptodon smithii]
 gi|303228095|emb|CAR65267.1| ribosomal protein S4 protein [Alsia californica]
 gi|303228103|emb|CAR65271.1| ribosomal protein S4 protein [Cryptoleptodon pluvinii]
 gi|303228123|emb|CAR65281.1| ribosomal protein S4 protein [Neckera besseri]
 gi|303228125|emb|CAR65282.1| ribosomal protein S4 protein [Neckera brownii]
 gi|303228127|emb|CAR65283.1| ribosomal protein S4 protein [Neckera complanata]
 gi|303228131|emb|CAR65285.1| ribosomal protein S4 protein [Neckera crispa]
 gi|303228133|emb|CAR65286.1| ribosomal protein S4 protein [Neckera douglasii]
 gi|303228135|emb|CAR65287.1| ribosomal protein S4 protein [Neckera goughiana]
 gi|303228141|emb|CAR65290.1| ribosomal protein S4 protein [Neckera intermedia]
 gi|303228143|emb|CAR65291.1| ribosomal protein S4 protein [Neckera jamesonii]
 gi|303228145|emb|CAR65292.1| ribosomal protein S4 protein [Metaneckera menziesii]
 gi|303228151|emb|CAR65295.1| ribosomal protein S4 protein [Neckera scabridens]
 gi|303228155|emb|CAR65297.1| ribosomal protein S4 protein [Neckera valentiniana]
 gi|303228159|emb|CAR65299.1| ribosomal protein S4 protein [Neckera yezoana]
 gi|325530347|emb|CAX53447.1| ribosomal protein S4 [Leptodon smithii]
 gi|325530349|emb|CAX53448.1| ribosomal protein S4 [Leptodon smithii]
 gi|325530351|emb|CAX53449.1| ribosomal protein S4 [Leptodon smithii]
 gi|325530353|emb|CAX53450.1| ribosomal protein S4 [Leptodon smithii]
 gi|325530355|emb|CAX53451.1| ribosomal protein S4 [Leptodon smithii]
 gi|325530357|emb|CAX53452.1| ribosomal protein S4 [Leptodon sp. W178]
 gi|325530359|emb|CAX53453.1| ribosomal protein S4 [Leptodon smithii]
 gi|325910586|emb|CAX53715.1| ribosomal protein S4 [Leptodon sp. B564]
 gi|325910588|emb|CAX53716.1| ribosomal protein S4 [Leptodon sp. W178]
          Length = 46

 Score = 44.1 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+     S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTSQLKSS 31


>gi|159145756|gb|ABW90415.1| putative ribosomal protein S9 [Barentsia elongata]
          Length = 194

 Score = 44.1 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 21  KERLDQELKLIGEYGLRNKREVWRVKYLLAKMRKTARVLLTLDEKDPRRLFEGNALLRRL 80

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E  +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 81  VRIGVLDEEKMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 140

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI SY  +      +    K 
Sbjct: 141 VNIPSYVVRLDSQKHIDFSLKS 162


>gi|189342372|gb|ACD91765.1| ribosomal protein S4 [Cousinia heterophylla]
 gi|189342400|gb|ACD91779.1| ribosomal protein S4 [Cousinia heteroloba]
 gi|189342426|gb|ACD91792.1| ribosomal protein S4 [Cousinia vicaria]
          Length = 44

 Score = 44.1 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYF 48
          MS+    + K  RR+G       K P      G  L  Q R  K S +
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQY 44


>gi|330993480|ref|ZP_08317415.1| Heat shock protein 15-like protein [Gluconacetobacter sp. SXCC-1]
 gi|329759510|gb|EGG76019.1| Heat shock protein 15-like protein [Gluconacetobacter sp. SXCC-1]
          Length = 99

 Score = 43.8 bits (102), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  +  A+F  +  A  Q     HV +N + V     +   GD++ +    ++   V
Sbjct: 13  QRLDLWLLHARFGRSRTACAQLATGGHVRINRQRVTKAHAQVHVGDILTLPSPDRKTVIV 72

Query: 154 LEASQLAER 162
           +     AER
Sbjct: 73  IRVRACAER 81


>gi|124506321|ref|XP_001351758.1| 40S ribosomal protein S9, putative [Plasmodium falciparum 3D7]
 gi|23504687|emb|CAD51565.1| 40S ribosomal protein S9, putative [Plasmodium falciparum 3D7]
          Length = 189

 Score = 43.8 bits (102), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80
            N R      +   +    + + L L  K   + + G   E   R + ++       ++ 
Sbjct: 37  KNKREIWRVQYLLAKIRSAARYLLTLDEKSSKRIFQG---EALLRRMVRQGLLGENEEKL 93

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
                  L   LE RL T V++     ++  AR  +  RH+ V  + V+I S+  +    
Sbjct: 94  DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSE 153

Query: 141 IEV 143
             +
Sbjct: 154 KHI 156


>gi|189342478|gb|ACD91818.1| ribosomal protein S4 [Cousinia greuteri]
          Length = 43

 Score = 43.8 bits (102), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|42794706|gb|AAS45748.1| Rps4 [Themistoclesia costaricensis]
          Length = 26

 Score = 43.8 bits (102), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKKP 26


>gi|189342218|gb|ACD91688.1| ribosomal protein S4 [Cousinia pineticola]
          Length = 44

 Score = 43.8 bits (102), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNT 29
          MS+    + K  RR+G       K P   
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRPXTR 29


>gi|172044755|gb|ACB69930.1| ribosomal protein S4 [Oligochaeta ramosa]
          Length = 45

 Score = 43.8 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|294337094|emb|CAQ52697.1| ribosomal protein S4 [Cratoneuropsis relaxa]
          Length = 46

 Score = 43.8 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K P    S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKIPQLKSS 31


>gi|167526531|ref|XP_001747599.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774045|gb|EDQ87679.1| predicted protein [Monosiga brevicollis MX1]
          Length = 196

 Score = 43.8 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G  G R K +       L   +K  +    + EK  R +F+        
Sbjct: 27  KARLDQELKLVGEFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPRRLFEGNAILRRL 86

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 87  IRLGVIDEDRMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 146

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ SY  +      +    K 
Sbjct: 147 VNVPSYMVRLDSQKHIDFALKS 168


>gi|84489670|ref|YP_447902.1| 30S ribosomal protein S4P [Methanosphaera stadtmanae DSM 3091]
 gi|121697850|sp|Q2NFZ4|RS4_METST RecName: Full=30S ribosomal protein S4P
 gi|84372989|gb|ABC57259.1| 30S ribosomal protein S4P [Methanosphaera stadtmanae DSM 3091]
          Length = 182

 Score = 43.8 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +       N+   L  RL ++V++     T   AR FV H H+ +NG+ +N   +  +
Sbjct: 86  NAKLEEVLDLNVEDILRRRLQSLVFKRGLSHTAKEARLFVVHGHITLNGKKINAPGHLVE 145


>gi|254167741|ref|ZP_04874591.1| ribosomal protein S4 [Aciduliprofundum boonei T469]
 gi|289597070|ref|YP_003483766.1| ribosomal protein S4 [Aciduliprofundum boonei T469]
 gi|197623269|gb|EDY35834.1| ribosomal protein S4 [Aciduliprofundum boonei T469]
 gi|289534857|gb|ADD09204.1| ribosomal protein S4 [Aciduliprofundum boonei T469]
          Length = 187

 Score = 43.8 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 25/51 (49%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
             L  RL TIVY      T   ARQF+ H H+ +  R V I SY  ++ + 
Sbjct: 103 DILRRRLQTIVYLKGLARTPKQARQFIVHGHIAIGDRKVTIPSYLVRKEEE 153


>gi|301154074|emb|CAR31435.1| ribosomal protein S4 protein [Pinnatella kuehliana]
 gi|303228169|emb|CAR65304.1| ribosomal protein S4 protein [Pinnatella ambigua]
 gi|303228175|emb|CAR65307.1| ribosomal protein S4 protein [Pinnatella makinoi]
          Length = 46

 Score = 43.8 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGSTNKTPQLKSS 31


>gi|71028602|ref|XP_763944.1| 40S ribosomal protein S9 [Theileria parva strain Muguga]
 gi|68350898|gb|EAN31661.1| 40S ribosomal protein S9, putative [Theileria parva]
          Length = 188

 Score = 43.8 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 3/120 (2%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGD 83
            N R      +   +    + + L L  K   + + G+   ++        +   +    
Sbjct: 37  KNKREVWRVQYVLSKIRSAARYLLTLDPKDNKRLFQGEALLRRMVRYGLMNENEQKLDFV 96

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
               L   +E RL T V++     +I  AR  +  RH+ V+ + V+I S+  +      +
Sbjct: 97  LGLTLSKLMERRLQTKVFKLGLAKSIHHARCLIRQRHICVHRQLVDIPSFLVRVDSEKHI 156


>gi|224000067|ref|XP_002289706.1| RS9, ribosomal protein 9 [Thalassiosira pseudonana CCMP1335]
 gi|220974914|gb|EED93243.1| RS9, ribosomal protein 9 [Thalassiosira pseudonana CCMP1335]
          Length = 190

 Score = 43.8 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
               LE RL T V++     +I  AR  +  RH+ V G+ VN+ S+  +      +   +
Sbjct: 103 TQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHISVGGQLVNVPSFNVRTSSEKHIDISA 162

Query: 148 KQ 149
             
Sbjct: 163 DS 164


>gi|254167203|ref|ZP_04874056.1| ribosomal protein S4 [Aciduliprofundum boonei T469]
 gi|197624059|gb|EDY36621.1| ribosomal protein S4 [Aciduliprofundum boonei T469]
          Length = 187

 Score = 43.8 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 25/51 (49%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
             L  RL TIVY      T   ARQF+ H H+ +  R V I SY  ++ + 
Sbjct: 103 DILRRRLQTIVYLKGLARTPKQARQFIVHGHIAIGDRKVTIPSYLVRKEEE 153


>gi|126952073|gb|ABO28147.1| ribosomal protein S4 [Citrus x paradisi]
          Length = 60

 Score = 43.8 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTSKRP 26


>gi|49532932|dbj|BAD26701.1| ribosomal protein S9 [Plutella xylostella]
          Length = 194

 Score = 43.8 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  + +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++A    +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 143 VNIPSFIVR 151


>gi|302668072|ref|XP_003025614.1| hypothetical protein TRV_00254 [Trichophyton verrucosum HKI 0517]
 gi|291189729|gb|EFE45003.1| hypothetical protein TRV_00254 [Trichophyton verrucosum HKI 0517]
          Length = 271

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 181 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 224


>gi|84996521|ref|XP_952982.1| 40S ribosomal protein S9 [Theileria annulata strain Ankara]
 gi|65303978|emb|CAI76357.1| 40S ribosomal protein S9, putative [Theileria annulata]
          Length = 188

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 3/120 (2%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGD 83
            N R      +   +    + + L L  K   + + G+   ++        +   +    
Sbjct: 37  KNKREVWRVQYVLSKIRSAARYLLTLDPKDNKRLFQGEALLRRMVRYGLMNENEQKLDFV 96

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
               L   +E RL T V++     +I  AR  +  RH+ V+ + V+I S+  +      +
Sbjct: 97  LGLTLSKLMERRLQTKVFKLGLAKSIHHARCLIRQRHICVHRQLVDIPSFLVRVDSEKHI 156


>gi|159488620|ref|XP_001702303.1| ribosomal protein S9, component of cytosolic 80S ribosome and 40S
           small subunit [Chlamydomonas reinhardtii]
 gi|158271208|gb|EDO97033.1| ribosomal protein S9, component of cytosolic 80S ribosome and 40S
           small subunit [Chlamydomonas reinhardtii]
          Length = 190

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E +        D+     +     FLE RL T+V++     +I  AR  +  RH+
Sbjct: 85  YGLLNESQ--------DKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158


>gi|189342442|gb|ACD91800.1| ribosomal protein S4 [Cousinia tenuisecta]
          Length = 45

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|217075114|gb|ACJ85917.1| unknown [Medicago truncatula]
          Length = 197

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88
            R      +   R    +   L L  K   + + G   E   R +FK           + 
Sbjct: 41  KRELWRVQYALSRIRNNARTLLTLDEKNPRRIFEG---EALLRRMFKHGLLDETQNKLDY 97

Query: 89  I------SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
           +      +FLE RL T+V+++    +I  AR  +  RH+ V  + VNI S+  +      
Sbjct: 98  VLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKH 157

Query: 143 V 143
           +
Sbjct: 158 I 158


>gi|156095444|ref|XP_001613757.1| 40S ribosomal protein S9 [Plasmodium vivax SaI-1]
 gi|148802631|gb|EDL44030.1| 40S ribosomal protein S9, putative [Plasmodium vivax]
          Length = 189

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80
            N R      +   +    + + L L  K   + + G   E   R + ++       ++ 
Sbjct: 37  KNKREIWRVQYLLAKIRSAARYLLTLDEKSSKRIFQG---EALLRRMVRQGLLGENEEKL 93

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
                  L   LE RL T V++     ++  AR  +  RH+ V  + V+I S+  +    
Sbjct: 94  DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSE 153

Query: 141 IEV 143
             +
Sbjct: 154 KHI 156


>gi|83286205|ref|XP_730059.1| ribosomal protein S4 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23489625|gb|EAA21624.1| ribosomal protein S4, putative [Plasmodium yoelii yoelii]
          Length = 214

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80
            N R      +   +    + + L L  K   + + G   E   R + ++       ++ 
Sbjct: 37  KNKREIWRVQYLLAKIRSAARYLLTLDEKSPKRIFQG---EALLRRMVRQGLLGENEEKL 93

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
                  L   LE RL T V++     ++  AR  +  RH+ V  + V+I S+  +    
Sbjct: 94  DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRIDSE 153

Query: 141 IEV 143
             +
Sbjct: 154 KHI 156


>gi|157690738|tpe|CAL69096.1| TPA: putative 40S ribosomal protein S9 [Spadella cephaloptera]
          Length = 189

 Score = 43.8 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G  G R K +     L L   +K  +    + EK  R +F+        
Sbjct: 21  KERLDQELKLIGEFGLRNKREVWRVKLALAKIRKSARILLTLEEKDPRRLFEGNALLRRL 80

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 81  VRIGVLDESKMKLDYVLGLQVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQL 140

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +    K 
Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162


>gi|330931906|ref|XP_003303583.1| hypothetical protein PTT_15843 [Pyrenophora teres f. teres 0-1]
 gi|311320337|gb|EFQ88321.1| hypothetical protein PTT_15843 [Pyrenophora teres f. teres 0-1]
          Length = 270

 Score = 43.8 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDT 84
           N R          +  + +   L L  K   + + G+   ++      + +   +     
Sbjct: 114 NKREVWRVQLTLSKIRRAARSLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVL 173

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +  +  FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 174 ALKIEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 225


>gi|166952357|gb|ABZ04261.1| ribosomal protein rps9 [Lineus viridis]
          Length = 194

 Score = 43.8 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 50/151 (33%), Gaps = 21/151 (13%)

Query: 20  WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK------ 68
           +  P+ P             G +G R K +     L L   +K  +    + EK      
Sbjct: 12  FATPRRPFEKERLDQELKLIGEYGLRNKREVWRIKLTLAKIRKAARELLTLDEKDPKRLF 71

Query: 69  ----KFRSIFKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
                 R + +         +        L  F+E RL T V++     +I  AR  +  
Sbjct: 72  EGNALLRRLVRIGVLDEGKMKLDYVLGLRLEDFMERRLQTQVFKLGLAKSIHHARVLIRQ 131

Query: 119 RHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           RH+ V  + VNI SY  +      +    K 
Sbjct: 132 RHIRVRTQVVNIPSYIVRLDSQKHIDFSLKS 162


>gi|221056951|ref|XP_002259613.1| 40S ribosomal subunit protein S9 [Plasmodium knowlesi strain H]
 gi|193809685|emb|CAQ40386.1| 40S ribosomal subunit protein S9, putative [Plasmodium knowlesi
           strain H]
          Length = 189

 Score = 43.4 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80
            N R      +   +    + + L L  K   + + G   E   R + ++       ++ 
Sbjct: 37  KNKREIWRVQYLLAKIRSAARYLLTLDEKSSKRIFQG---EALLRRMVRQGLLGENEEKL 93

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
                  L   LE RL T V++     ++  AR  +  RH+ V  + V+I S+  +    
Sbjct: 94  DYVLGLTLPKLLERRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSE 153

Query: 141 IEV 143
             +
Sbjct: 154 KHI 156


>gi|189342200|gb|ACD91679.1| ribosomal protein S4 [Cousinia amplissima]
          Length = 44

 Score = 43.4 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|189342270|gb|ACD91714.1| ribosomal protein S4 [Cousinia syrdariensis]
          Length = 45

 Score = 43.4 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  RR+G       K P      G  L  Q R  K S + 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----RTGSDLRNQSRSGKKSQYR 45


>gi|6687299|emb|CAB64903.1| 40S ribosomal protein S9 [Cyanophora paradoxa]
          Length = 101

 Score = 43.4 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
              +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 6   GLKIQDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNIPSFMVRVDSQKHI 64


>gi|325120464|emb|CBZ56018.1| hypothetical protein NCLIV_064440 [Neospora caninum Liverpool]
          Length = 188

 Score = 43.4 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%)

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +        +  FLE RL T V++     +I  AR  +  RH+ V    V+I S+  + 
Sbjct: 91  QKLDYVLGLTVAKFLERRLQTKVFKLGLAKSIHHARVLIRQRHIRVGKHIVDIPSFMVRV 150

Query: 138 GDVIEV 143
                V
Sbjct: 151 DSEKHV 156


>gi|237835795|ref|XP_002367195.1| 40S ribosomal protein S9, putative [Toxoplasma gondii ME49]
 gi|211964859|gb|EEB00055.1| 40S ribosomal protein S9, putative [Toxoplasma gondii ME49]
 gi|221485275|gb|EEE23556.1| 40S ribosomal protein S9, putative [Toxoplasma gondii GT1]
 gi|221506130|gb|EEE31765.1| 40S ribosomal protein S9, putative [Toxoplasma gondii VEG]
          Length = 188

 Score = 43.4 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%)

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE 137
            +        +  FLE RL T V++     +I  AR  +  RH+ V    V+I S+  + 
Sbjct: 91  QKLDYVLGLTVAKFLERRLQTKVFKLGLAKSIHHARVLIRQRHIRVGKHIVDIPSFMVRV 150

Query: 138 GDVIEV 143
                V
Sbjct: 151 DSEKHV 156


>gi|328874713|gb|EGG23078.1| ribosomal protein [Dictyostelium fasciculatum]
          Length = 187

 Score = 43.4 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ + +     G  G + K++     L L   +K  +    + EK+ + IF+        
Sbjct: 18  KARIESELKVIGEFGLKNKNEVWRVQLALAKIRKSARELLILHEKEPKRIFQGAALLRRL 77

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                     ++        +  F+E RL T+V++     +I  AR  +  RH+ V  + 
Sbjct: 78  HKIGVMDESKNKLDYVLGLKVQDFMERRLQTLVFKQGLAKSIHHARVLIKGRHIRVGKQL 137

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ SY  +      +    + 
Sbjct: 138 VNVPSYMVRVDSEKHIGMNPRS 159


>gi|303228153|emb|CAR65296.1| ribosomal protein S4 protein [Neckera submacrocarpa]
          Length = 46

 Score = 43.4 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K+     S
Sbjct: 1  MSRYRGPRVRIIRRLGILPGLTNKTSQLKSS 31


>gi|70909509|emb|CAJ17220.1| ribosomal protein S9e [Sphaerius sp. APV-2005]
          Length = 193

 Score = 43.4 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 92  RMKLDYVLGLTITDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 151

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 152 LDSQKHIDFSLKS 164


>gi|172044747|gb|ACB69926.1| ribosomal protein S4 [Centaurothamnus maximus]
 gi|172044749|gb|ACB69927.1| ribosomal protein S4 [Ochrocephala imatongensis]
 gi|172044751|gb|ACB69928.1| ribosomal protein S4 [Oligochaeta divaricata]
 gi|172044753|gb|ACB69929.1| ribosomal protein S4 [Oligochaeta minima]
 gi|172044757|gb|ACB69931.1| ribosomal protein S4 [Myopordon pulchellum]
 gi|172044759|gb|ACB69932.1| ribosomal protein S4 [Myopordon hyrcanum]
 gi|172044761|gb|ACB69933.1| ribosomal protein S4 [Myopordon persicum]
 gi|172044763|gb|ACB69934.1| ribosomal protein S4 [Myopordon aucheri]
 gi|189342192|gb|ACD91675.1| ribosomal protein S4 [Cousinia triflora]
 gi|189342194|gb|ACD91676.1| ribosomal protein S4 [Cousinia pseudarctium]
 gi|189342196|gb|ACD91677.1| ribosomal protein S4 [Cousinia umbrosa]
 gi|189342198|gb|ACD91678.1| ribosomal protein S4 [Cousinia tomentella]
 gi|189342202|gb|ACD91680.1| ribosomal protein S4 [Cousinia albertii]
 gi|189342204|gb|ACD91681.1| ribosomal protein S4 [Cousinia medians]
 gi|189342206|gb|ACD91682.1| ribosomal protein S4 [Cousinia karatavica]
 gi|189342208|gb|ACD91683.1| ribosomal protein S4 [Cousinia korshinskyi]
 gi|189342210|gb|ACD91684.1| ribosomal protein S4 [Cousinia korolkowii]
 gi|189342212|gb|ACD91685.1| ribosomal protein S4 [Cousinia tenella]
 gi|189342216|gb|ACD91687.1| ribosomal protein S4 [Cousinia sogdiana]
 gi|189342220|gb|ACD91689.1| ribosomal protein S4 [Cousinia cylindracea]
 gi|189342224|gb|ACD91691.1| ribosomal protein S4 [Cousinia adenosticta]
 gi|189342226|gb|ACD91692.1| ribosomal protein S4 [Cousinia refracta]
 gi|189342228|gb|ACD91693.1| ribosomal protein S4 [Cousinia lappacea]
 gi|189342230|gb|ACD91694.1| ribosomal protein S4 [Cousinia abolinii]
 gi|189342232|gb|ACD91695.1| ribosomal protein S4 [Cousinia grandifolia]
 gi|189342234|gb|ACD91696.1| ribosomal protein S4 [Cousinia anomala]
 gi|189342236|gb|ACD91697.1| ribosomal protein S4 [Cousinia stocksii]
 gi|189342238|gb|ACD91698.1| ribosomal protein S4 [Cousinia dolichophylla]
 gi|189342240|gb|ACD91699.1| ribosomal protein S4 [Cousinia arctioides]
 gi|189342244|gb|ACD91701.1| ribosomal protein S4 [Cousinia chlorantha]
 gi|189342246|gb|ACD91702.1| ribosomal protein S4 [Arctium leiospermum]
 gi|189342248|gb|ACD91703.1| ribosomal protein S4 [Arctium minus]
 gi|189342250|gb|ACD91704.1| ribosomal protein S4 [Arctium lappa]
 gi|189342252|gb|ACD91705.1| ribosomal protein S4 [Schmalhausenia nidulans]
 gi|189342256|gb|ACD91707.1| ribosomal protein S4 [Cousinia pallidivirens]
 gi|189342258|gb|ACD91708.1| ribosomal protein S4 [Cousinia tianschanica]
 gi|189342260|gb|ACD91709.1| ribosomal protein S4 [Cousinia regelii]
 gi|189342266|gb|ACD91712.1| ribosomal protein S4 [Cousinia congesta]
 gi|189342272|gb|ACD91715.1| ribosomal protein S4 [Cousinia salangensis]
 gi|189342274|gb|ACD91716.1| ribosomal protein S4 [Cousinia minkwitziae]
 gi|189342276|gb|ACD91717.1| ribosomal protein S4 [Cousinia chrysantha]
 gi|189342278|gb|ACD91718.1| ribosomal protein S4 [Cousinia purpurea]
 gi|189342280|gb|ACD91719.1| ribosomal protein S4 [Cousinia polycephala]
 gi|189342282|gb|ACD91720.1| ribosomal protein S4 [Tiarocarpus hymenostephanus]
 gi|189342284|gb|ACD91721.1| ribosomal protein S4 [Tiarocarpus neubaueri]
 gi|189342286|gb|ACD91722.1| ribosomal protein S4 [Cousinia dissecta]
 gi|189342288|gb|ACD91723.1| ribosomal protein S4 [Cousinia meghrica]
 gi|189342290|gb|ACD91724.1| ribosomal protein S4 [Cousinia crassipes]
 gi|189342292|gb|ACD91725.1| ribosomal protein S4 [Cousinia coerulea]
 gi|189342294|gb|ACD91726.1| ribosomal protein S4 [Cousinia chaetocephala]
 gi|189342296|gb|ACD91727.1| ribosomal protein S4 [Cousinia harazensis]
 gi|189342298|gb|ACD91728.1| ribosomal protein S4 [Cousinia hastifolia]
 gi|189342300|gb|ACD91729.1| ribosomal protein S4 [Cousinia chrysochlora]
 gi|189342302|gb|ACD91730.1| ribosomal protein S4 [Cousinia immitantiformis]
 gi|189342304|gb|ACD91731.1| ribosomal protein S4 [Cousinia concolor]
 gi|189342306|gb|ACD91732.1| ribosomal protein S4 [Cousinia oreodoxa]
 gi|189342308|gb|ACD91733.1| ribosomal protein S4 [Cousinia komarovii]
 gi|189342314|gb|ACD91736.1| ribosomal protein S4 [Cousinia dipterocarpa]
 gi|189342316|gb|ACD91737.1| ribosomal protein S4 [Cousinia turkmenorum]
 gi|189342318|gb|ACD91738.1| ribosomal protein S4 [Cryptococcus laurentii]
 gi|189342320|gb|ACD91739.1| ribosomal protein S4 [Cousinia longifolia]
 gi|189342322|gb|ACD91740.1| ribosomal protein S4 [Cousinia gatchsaranica]
 gi|189342324|gb|ACD91741.1| ribosomal protein S4 [Cousinia eriophylla]
 gi|189342326|gb|ACD91742.1| ribosomal protein S4 [Cousinia rechingerorum]
 gi|189342328|gb|ACD91743.1| ribosomal protein S4 [Cousinia apiculata]
 gi|189342330|gb|ACD91744.1| ribosomal protein S4 [Cousinia trachyphyllaria]
 gi|189342332|gb|ACD91745.1| ribosomal protein S4 [Cousinia eryngioides]
 gi|189342334|gb|ACD91746.1| ribosomal protein S4 [Cousinia arctotidifolia]
 gi|189342336|gb|ACD91747.1| ribosomal protein S4 [Cousinia badghysi]
 gi|189342338|gb|ACD91748.1| ribosomal protein S4 [Cousinia ecbatanensis]
 gi|189342342|gb|ACD91750.1| ribosomal protein S4 [Cousinia macrocephala]
 gi|189342344|gb|ACD91751.1| ribosomal protein S4 [Cousinia leucantha]
 gi|189342346|gb|ACD91752.1| ribosomal protein S4 [Cousinia tenuifolia]
 gi|189342348|gb|ACD91753.1| ribosomal protein S4 [Cousinia heliantha]
 gi|189342350|gb|ACD91754.1| ribosomal protein S4 [Cousinia brachyptera]
 gi|189342352|gb|ACD91755.1| ribosomal protein S4 [Cousinia turcomanica]
 gi|189342354|gb|ACD91756.1| ribosomal protein S4 [Cousinia severzowii]
 gi|189342358|gb|ACD91758.1| ribosomal protein S4 [Cousinia lasiolepis]
 gi|189342360|gb|ACD91759.1| ribosomal protein S4 [Cousinia coronata]
 gi|189342362|gb|ACD91760.1| ribosomal protein S4 [Cousinia buphthalmoides]
 gi|189342364|gb|ACD91761.1| ribosomal protein S4 [Cousinia shahvarica]
 gi|189342366|gb|ACD91762.1| ribosomal protein S4 [Cousinia alexeenkoana]
 gi|189342374|gb|ACD91766.1| ribosomal protein S4 [Cousinia lasiandra]
 gi|189342376|gb|ACD91767.1| ribosomal protein S4 [Cousinia pugionifera]
 gi|189342378|gb|ACD91768.1| ribosomal protein S4 [Cousinia rigidissima]
 gi|189342380|gb|ACD91769.1| ribosomal protein S4 [Cousinia xiphiolepis]
 gi|189342382|gb|ACD91770.1| ribosomal protein S4 [Cousinia pusilla]
 gi|189342384|gb|ACD91771.1| ribosomal protein S4 [Cousinia scariosa]
 gi|189342386|gb|ACD91772.1| ribosomal protein S4 [Cousinia auriculata]
 gi|189342388|gb|ACD91773.1| ribosomal protein S4 [Cousinia sarawschanica]
 gi|189342390|gb|ACD91774.1| ribosomal protein S4 [Cousinia franchetii]
 gi|189342392|gb|ACD91775.1| ribosomal protein S4 [Cousinia raddeana]
 gi|189342394|gb|ACD91776.1| ribosomal protein S4 [Cousinia candolleana]
 gi|189342396|gb|ACD91777.1| ribosomal protein S4 [Cousinia egregia]
 gi|189342398|gb|ACD91778.1| ribosomal protein S4 [Cousinia splendida]
 gi|189342404|gb|ACD91781.1| ribosomal protein S4 [Cousinia antonowii]
 gi|189342406|gb|ACD91782.1| ribosomal protein S4 [Cousinia qaisarensis]
 gi|189342408|gb|ACD91783.1| ribosomal protein S4 [Cousinia multiloba]
 gi|189342410|gb|ACD91784.1| ribosomal protein S4 [Cousinia olgae]
 gi|189342412|gb|ACD91785.1| ribosomal protein S4 [Cousinia piptocephala]
 gi|189342414|gb|ACD91786.1| ribosomal protein S4 [Cousinia urumiensis]
 gi|189342416|gb|ACD91787.1| ribosomal protein S4 [Cousinia leptolepis]
 gi|189342418|gb|ACD91788.1| ribosomal protein S4 [Cousinia gmelini]
 gi|189342420|gb|ACD91789.1| ribosomal protein S4 [Cousinia oligocephala]
 gi|189342424|gb|ACD91791.1| ribosomal protein S4 [Cousinia belangeri]
 gi|189342428|gb|ACD91793.1| ribosomal protein S4 [Cousinia thamnodes]
 gi|189342430|gb|ACD91794.1| ribosomal protein S4 [Cousinia semilacera]
 gi|189342432|gb|ACD91795.1| ribosomal protein S4 [Cousinia tenuiramula]
 gi|189342434|gb|ACD91796.1| ribosomal protein S4 [Cousinia macroptera]
 gi|189342436|gb|ACD91797.1| ribosomal protein S4 [Cousinia daralaghezica]
 gi|189342438|gb|ACD91798.1| ribosomal protein S4 [Cousinia radians]
 gi|189342440|gb|ACD91799.1| ribosomal protein S4 [Cousinia lanata]
 gi|189342444|gb|ACD91801.1| ribosomal protein S4 [Cousinia incompta]
 gi|189342446|gb|ACD91802.1| ribosomal protein S4 [Cousinia ariana]
 gi|189342448|gb|ACD91803.1| ribosomal protein S4 [Cousinia rigida]
 gi|189342450|gb|ACD91804.1| ribosomal protein S4 [Cousinia alfredii]
 gi|189342452|gb|ACD91805.1| ribosomal protein S4 [Cousinia ninae]
 gi|189342454|gb|ACD91806.1| ribosomal protein S4 [Cousinia dubia]
 gi|189342456|gb|ACD91807.1| ribosomal protein S4 [Cousinia chlorocephala]
 gi|189342458|gb|ACD91808.1| ribosomal protein S4 [Cousinia oxiana]
 gi|189342460|gb|ACD91809.1| ribosomal protein S4 [Cousinia spryginii]
 gi|189342466|gb|ACD91812.1| ribosomal protein S4 [Cousinia polyneura]
 gi|189342468|gb|ACD91813.1| ribosomal protein S4 [Cousinia oopoda]
 gi|189342470|gb|ACD91814.1| ribosomal protein S4 [Cousinia podophylla]
 gi|189342472|gb|ACD91815.1| ribosomal protein S4 [Cousinia tashkurghanica]
 gi|189342474|gb|ACD91816.1| ribosomal protein S4 [Cousinia intertexta]
 gi|189342476|gb|ACD91817.1| ribosomal protein S4 [Cousinia platylepis]
 gi|189342480|gb|ACD91819.1| ribosomal protein S4 [Cousinia submutica]
 gi|189342482|gb|ACD91820.1| ribosomal protein S4 [Cousinia ferruginea]
 gi|189342484|gb|ACD91821.1| ribosomal protein S4 [Cousinia jassyensis]
 gi|189342486|gb|ACD91822.1| ribosomal protein S4 [Cousinia crispa]
 gi|189342488|gb|ACD91823.1| ribosomal protein S4 [Cousinia batalinii]
 gi|189342490|gb|ACD91824.1| ribosomal protein S4 [Cousinia pannosa]
 gi|189342492|gb|ACD91825.1| ribosomal protein S4 [Cousinia polytimetica]
 gi|189342494|gb|ACD91826.1| ribosomal protein S4 [Cousinia prolifera]
 gi|189342496|gb|ACD91827.1| ribosomal protein S4 [Cousinia speciosa]
 gi|189342502|gb|ACD91830.1| ribosomal protein S4 [Cousinia outichaschensis]
 gi|189342504|gb|ACD91831.1| ribosomal protein S4 [Cousinia botschantzevii]
 gi|189342506|gb|ACD91832.1| ribosomal protein S4 [Cousinia sclerophylla]
 gi|329350639|gb|AEB91330.1| ribosomal protein S4 [Cousinia aurea]
 gi|329350642|gb|AEB91331.1| ribosomal protein S4 [Cousinia fedtschenkoana]
 gi|329350645|gb|AEB91332.1| ribosomal protein S4 [Cousinia horrescens]
          Length = 45

 Score = 43.4 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  RR+G       K P      G  L  Q R  K S + 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYR 45


>gi|242040777|ref|XP_002467783.1| hypothetical protein SORBIDRAFT_01g033980 [Sorghum bicolor]
 gi|241921637|gb|EER94781.1| hypothetical protein SORBIDRAFT_01g033980 [Sorghum bicolor]
          Length = 177

 Score = 43.4 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 5/129 (3%)

Query: 20  WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           + +P+ P             G +G R K +       L   +   +    + EK  R IF
Sbjct: 14  FKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARELLTLDEKNPRRIF 73

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +  ++     +  + +FL+ RL TIV++     +I  AR  +  RH+ V  + VNI S+ 
Sbjct: 74  EGENKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHIRVGRQLVNIPSFM 133

Query: 135 CKEGDVIEV 143
            +      +
Sbjct: 134 VRVDSEKHI 142


>gi|294337128|emb|CAQ52714.1| ribosomal protein S4 [Hampeella pallens]
          Length = 46

 Score = 43.4 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + KI RR+G       K P    +
Sbjct: 1  MSRYRGPRVKIIRRLGNLPGLTNKIPQLKSN 31


>gi|309951484|gb|ADO95157.1| ribosomal protein S9 [Antheraea yamamai]
          Length = 194

 Score = 43.4 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  + +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++A    +I  AR  +  RH+ V  + 
Sbjct: 83  VRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 143 VNIPSFIVR 151


>gi|168050227|ref|XP_001777561.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671046|gb|EDQ57604.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 197

 Score = 43.4 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDENQSKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + +FLE RL TIV+++    +I  AR  +  RH+ V  + V++ S+  +      V
Sbjct: 100 ALTVENFLERRLQTIVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHV 158


>gi|112984022|ref|NP_001037265.1| ribosomal protein S9 [Bombyx mori]
 gi|54609299|gb|AAV34865.1| ribosomal protein S9 [Bombyx mori]
          Length = 194

 Score = 43.4 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  + +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++A    +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 143 VNIPSFIVR 151


>gi|189342264|gb|ACD91711.1| ribosomal protein S4 [Cousinia bungeana]
 gi|189342500|gb|ACD91829.1| ribosomal protein S4 [Cousinia arachnoidea]
 gi|329350637|gb|AEB91329.1| ribosomal protein S4 [Arctium palladinii]
          Length = 45

 Score = 43.4 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|315115339|gb|ADT80642.1| ribosomal protein S9 [Euphydryas aurinia]
          Length = 194

 Score = 43.4 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  + +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++A    +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQV 142

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 143 VNIPSFIVR 151


>gi|237756133|ref|ZP_04584705.1| 30S ribosomal protein S4 [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691697|gb|EEP60733.1| 30S ribosomal protein S4 [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 52

 Score = 43.4 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 153 VLEASQLAE-RDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYS 205
             E  +  + R VP ++ ++ DN+    V      +++   + +    ++E+YS
Sbjct: 1   FKENLESRDPRSVPRWLELDKDNLRGKVV---EIPEEIELEIPVNVQYIIEYYS 51


>gi|168003337|ref|XP_001754369.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168017417|ref|XP_001761244.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687584|gb|EDQ73966.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694471|gb|EDQ80819.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 198

 Score = 43.4 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDENQSKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + +FLE RL T+V+++    +I  AR  +  RH+ V  + V++ S+  +      V
Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHV 158


>gi|168029425|ref|XP_001767226.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681481|gb|EDQ67907.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 198

 Score = 43.4 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDENQSKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + +FLE RL T+V+++    +I  AR  +  RH+ V  + V++ S+  +      V
Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHV 158


>gi|160347070|gb|ABX26127.1| ribosomal protein S9 [Haliotis discus discus]
          Length = 191

 Score = 43.0 bits (100), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           K  ++      G +G R K +       L   +K  +    + EK+ R +F+        
Sbjct: 21  KERLDQELKLIGEYGLRNKREVWRVKYTLARIRKSARELLTLDEKEPRRLFEGNALLRRL 80

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        L  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 81  VRIGVLDEGKMKLDYVLGLRLEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 140

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI SY  +      +    + 
Sbjct: 141 VNIPSYVVRLDSQKHIDFSLRS 162


>gi|157876707|ref|XP_001686697.1| 40S ribosomal protein S9 [Leishmania major strain Friedlin]
 gi|66476134|gb|AAY51375.1| ribosomal protein S9 [Leishmania major]
 gi|68129772|emb|CAJ09078.1| putative 40S ribosomal protein S9 [Leishmania major strain
           Friedlin]
          Length = 190

 Score = 43.0 bits (100), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|288818047|ref|YP_003432394.1| hemolysin [Hydrogenobacter thermophilus TK-6]
 gi|288787446|dbj|BAI69193.1| hemolysin [Hydrogenobacter thermophilus TK-6]
 gi|308751648|gb|ADO45131.1| hemolysin A [Hydrogenobacter thermophilus TK-6]
          Length = 261

 Score = 43.0 bits (100), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
               RLD  +    F PT   A+  +    V V+G  V+   +  KEG  I+VK+  +
Sbjct: 1   MPRQRLDKKLVELGFAPTREKAQALIMAGMVTVDGLLVDKPGFLVKEGQKIDVKEPVR 58


>gi|148908089|gb|ABR17162.1| unknown [Picea sitchensis]
 gi|224284136|gb|ACN39805.1| unknown [Picea sitchensis]
 gi|224284446|gb|ACN39957.1| unknown [Picea sitchensis]
 gi|224286025|gb|ACN40724.1| unknown [Picea sitchensis]
 gi|294463673|gb|ADE77363.1| unknown [Picea sitchensis]
          Length = 197

 Score = 43.0 bits (100), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYTLSRIRNAARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDETQSKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + +FLE RL T+V+++    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158


>gi|42794714|gb|AAS45752.1| Rps4 [Thibaudia diphylla]
          Length = 59

 Score = 43.0 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPV 27
          MS+    + K  RR+G       K P 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKKPK 27


>gi|157864530|ref|XP_001680975.1| 40S ribosomal protein S9 [Leishmania major strain Friedlin]
 gi|68124268|emb|CAJ07030.1| putative 40S ribosomal protein S9 [Leishmania major strain
           Friedlin]
          Length = 190

 Score = 43.0 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|303228109|emb|CAR65274.1| ribosomal protein S4 protein [Handeliobryum sikkimense]
 gi|303228121|emb|CAR65280.1| ribosomal protein S4 protein [Hydrocryphaea wardii]
          Length = 46

 Score = 43.0 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I R +G       K+P    S
Sbjct: 1  MSRYRGPRVRIIRHLGTLPGLTNKTPQLKSS 31


>gi|146424326|gb|AAI41921.1| RPS9 protein [Homo sapiens]
          Length = 113

 Score = 43.0 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 30  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 89

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 90  LDSQKHIDFSLRS 102


>gi|166895637|ref|YP_001661430.1| ribosomal protein S4 [Cycas taitungensis]
 gi|166706969|dbj|BAF98433.1| ribosomal protein S4 [Cycas taitungensis]
          Length = 348

 Score = 43.0 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 20/137 (14%)

Query: 10  KIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKK 69
           +I RR+      R K     ++  P  +            ++L+  +K+   +G++   K
Sbjct: 27  RIPRRL------RSKRRSIKKNIYPRQN--------LNSYIKLQTIRKLPLSHGNLPIIK 72

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
                +             +   E+R D I  R  F  TI  ARQ ++HR +  N   VN
Sbjct: 73  MHGGTERTSYIP------FLFNPETRSDVIPVRPHFRETIPQARQPISHRKIRANNEMVN 126

Query: 130 IGSYRCKEGDVIEVKQK 146
           I   +   GD I +K  
Sbjct: 127 ITRSKVSHGDPIPIKDN 143


>gi|146077487|ref|XP_001463283.1| 40S ribosomal protein S9 [Leishmania infantum JPCM5]
 gi|146103077|ref|XP_001469478.1| 40S ribosomal protein S9 [Leishmania infantum]
 gi|134067367|emb|CAM65639.1| putative 40S ribosomal protein S9 [Leishmania infantum JPCM5]
 gi|134073848|emb|CAM72587.1| putative 40S ribosomal protein S9 [Leishmania infantum JPCM5]
 gi|322503484|emb|CBZ38569.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 190

 Score = 43.0 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|172044765|gb|ACB69935.1| ribosomal protein S4 [Rhaponticum pulchrum]
 gi|172044767|gb|ACB69936.1| ribosomal protein S4 [Rhaponticum repens]
 gi|189342254|gb|ACD91706.1| ribosomal protein S4 [Hypacanthium echinopifolium]
          Length = 45

 Score = 43.0 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  RR+G       K P      G  L  Q R  K S + 
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSVKKSQYR 45


>gi|255629938|gb|ACU15321.1| unknown [Glycine max]
          Length = 222

 Score = 43.0 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  R
Sbjct: 83  FRYGLLDETQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQR 134

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143
           H+ V  + VNI S+  +      +
Sbjct: 135 HIRVGRQVVNIPSFMVRVDSQKHI 158


>gi|189342262|gb|ACD91710.1| ribosomal protein S4 [Cousinia triceps]
          Length = 45

 Score = 43.0 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|154332394|ref|XP_001562571.1| 40S ribosomal protein S9 [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134059461|emb|CAM41687.1| putative 40S ribosomal protein S9 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 190

 Score = 43.0 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|291242674|ref|XP_002741225.1| PREDICTED: ribosomal protein S9-like [Saccoglossus kowalevskii]
          Length = 190

 Score = 43.0 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 21/159 (13%)

Query: 12  DRRIGENLWGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDIS 66
            R +G   +  P+ P             G  G R K +     L L   +K  +    + 
Sbjct: 1   MRIVGSKTYVTPRRPFEKERLDQELKLIGQFGLRNKREVWRVKLTLAKIRKAARELLTLD 60

Query: 67  EK----------KFRSIFKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
           EK            R + +         +        +  FLE RL T V++     +I 
Sbjct: 61  EKDQKRLFEGNALLRRLVRIGVLDEGKMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIH 120

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            AR  +  RH+ V  + VNI S+  +      +    K 
Sbjct: 121 HARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKS 159


>gi|116780962|gb|ABK21901.1| unknown [Picea sitchensis]
 gi|224284852|gb|ACN40156.1| unknown [Picea sitchensis]
          Length = 197

 Score = 43.0 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYTLSRIRNAARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + +FLE RL T+V+++    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158


>gi|268306404|gb|ACY95323.1| ribosomal protein S9 [Manduca sexta]
          Length = 194

 Score = 43.0 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 3/99 (3%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLD 97
           R  K +   L L  K   + + G+   ++      + ++  +        +  FLE RL 
Sbjct: 53  RIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQ 112

Query: 98  TIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           T V++A    +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 113 TQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 151


>gi|255562786|ref|XP_002522398.1| 40S ribosomal protein S9, putative [Ricinus communis]
 gi|223538283|gb|EEF39890.1| 40S ribosomal protein S9, putative [Ricinus communis]
          Length = 196

 Score = 43.0 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 3/118 (2%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85
            R      +   R    +   L L  K + + + G+   ++        +  ++     +
Sbjct: 41  KRELWRVQYALSRIRNAARMLLTLDEKNQRRIFEGEALLRRMNRYGLLDESQNKLDYVLA 100

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             + +FLE RL T+V+++    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 101 LTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158


>gi|329350647|gb|AEB91333.1| ribosomal protein S4 [Cousinia pentacantha]
          Length = 26

 Score = 43.0 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|329350652|gb|AEB91335.1| ribosomal protein S4 [Cousinia schmalhausenii]
          Length = 45

 Score = 43.0 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|242133532|gb|ACS87829.1| putative 40S ribosomal protein S9 [Crithidia sp. ATCC 30255]
          Length = 191

 Score = 43.0 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPETHPRRLLEGAAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|224140087|ref|XP_002323418.1| predicted protein [Populus trichocarpa]
 gi|118482457|gb|ABK93151.1| unknown [Populus trichocarpa]
 gi|118489211|gb|ABK96412.1| unknown [Populus trichocarpa x Populus deltoides]
 gi|222868048|gb|EEF05179.1| predicted protein [Populus trichocarpa]
          Length = 197

 Score = 43.0 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++A    +I  AR  +  +H+
Sbjct: 85  YGLLEESQ--------NKLDYVLALTVENFLERRLQTLVFKAGMAKSIHHARVLIKQKHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQVVNIPSFMVRVDSQKHI 158


>gi|154345646|ref|XP_001568760.1| 40S ribosomal protein S9 [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066102|emb|CAM43890.1| putative 40S ribosomal protein S9 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 189

 Score = 43.0 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|221043582|dbj|BAH13468.1| unnamed protein product [Homo sapiens]
          Length = 157

 Score = 42.6 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCK 136
           VNI S+   
Sbjct: 142 VNIPSFIVP 150


>gi|61654718|gb|AAX48885.1| S9 [Suberites domuncula]
          Length = 191

 Score = 42.6 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  + +F+        
Sbjct: 19  KARLDQELKIIGQYGLRNKREVWRVKYTLAKIRKAARELLTLDEKSPKRLFEGNALLRRM 78

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 79  VRIGVLDESRMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIKQRHIRVRKQI 138

Query: 128 VNIGSY 133
           VN+ S+
Sbjct: 139 VNVPSF 144


>gi|322828246|gb|EFZ32142.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi]
          Length = 160

 Score = 42.6 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 51  QLRAKQKMKKY--YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108
           QL     M++   YG + E        E D+     S  +   LE RL T+V++     +
Sbjct: 39  QLEGSAIMRRCHDYGFLEE--------EKDKLDYVLSLTVPDILERRLQTVVFKHGLAKS 90

Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  AR  +  RH+ V  + V I S+  +      +
Sbjct: 91  VHHARVLILQRHIAVAKQIVTIPSFIVRVSSEHHI 125


>gi|291498623|gb|ADE08097.1| rps4-1 [Triticum aestivum]
 gi|291498624|gb|ADE08098.1| rps4-2 [Triticum aestivum]
          Length = 357

 Score = 42.6 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 13/147 (8%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
           + +     ++ +  +K+  YYGD+  ++     +             +   E+R D I  
Sbjct: 45  RRENLNSNIKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPV 98

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R  F  T+  ARQ ++HR V +N   V I   +   GD+I  K+   +            
Sbjct: 99  RLHFSDTLPQARQPISHRRVCLNNGLVTITHLKVSHGDLISFKENDARTRGFEIRRSF-- 156

Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKD 188
                YI ++   ++  F+   S  K 
Sbjct: 157 -----YIDISVGKIIGKFLSAISVGKR 178


>gi|320167078|gb|EFW43977.1| S9 ribosomal protein [Capsaspora owczarzaki ATCC 30864]
          Length = 204

 Score = 42.6 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
             R        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 104 RMRLDFVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 160


>gi|6978048|gb|AAF34259.1| truncated ribosomal protein small subunit 4 [Pteridium aquilinum
          subsp. atlanticum]
          Length = 65

 Score = 42.6 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 3  KRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYY 62
          +    + K+ RR+        +   +          Q    K S F ++L AKQ+++  Y
Sbjct: 1  RYRGPRLKLIRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRFNY 60

Query: 63 G 63
          G
Sbjct: 61 G 61


>gi|20093836|ref|NP_613683.1| RNA-binding protein [Methanopyrus kandleri AV19]
 gi|19886762|gb|AAM01613.1| Predicted RNA-binding protein containing the S4 domain
           [Methanopyrus kandleri AV19]
          Length = 79

 Score = 42.6 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 22/54 (40%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             +  RLD  +       +   A++ V    V VNG+ V    +    GD IEV
Sbjct: 1   MTVGRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEV 54


>gi|284073116|gb|ADB77797.1| 40S ribosomal protein S9 [Chlamydomonas reinhardtii]
          Length = 178

 Score = 42.6 bits (99), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E +        D+     +     FLE RL T+V++     +I  AR  +  RH+
Sbjct: 85  YGLLNESQ--------DKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158


>gi|302853414|ref|XP_002958222.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
 gi|300256410|gb|EFJ40676.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
          Length = 190

 Score = 42.6 bits (99), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG +SE +        D+     +     FLE RL T+V++     +I  AR  +  RH+
Sbjct: 85  YGLLSESQ--------DKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158


>gi|322488438|emb|CBZ23684.1| putative 40S ribosomal protein S9 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 189

 Score = 42.6 bits (99), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|294337214|emb|CAQ52756.1| ribosomal protein S4 [Neckera pennata]
 gi|301154072|emb|CAR31434.1| ribosomal protein S4 protein [Forsstroemia producta]
 gi|303228139|emb|CAR65289.1| ribosomal protein S4 protein [Neckera hymenodonta]
          Length = 46

 Score = 42.6 bits (99), Expect = 0.030,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 12/31 (38%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRS 31
          MS+    + +I RR+G       K      S
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKISQLKSS 31


>gi|294337136|emb|CAQ52718.1| ribosomal protein S4 [Herpetineuron toccoae]
          Length = 46

 Score = 42.6 bits (99), Expect = 0.030,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNT 29
          MS+    + +I RR+G       K+P   
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTPQLK 29


>gi|212544526|ref|XP_002152417.1| 40S ribosomal protein S9 [Penicillium marneffei ATCC 18224]
 gi|210065386|gb|EEA19480.1| 40S ribosomal protein S9 [Penicillium marneffei ATCC 18224]
          Length = 191

 Score = 42.6 bits (99), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ SY  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSYMVR 149


>gi|169780348|ref|XP_001824638.1| 40S ribosomal protein S9 [Aspergillus oryzae RIB40]
 gi|238505532|ref|XP_002383988.1| 40S ribosomal protein S9 [Aspergillus flavus NRRL3357]
 gi|83773378|dbj|BAE63505.1| unnamed protein product [Aspergillus oryzae]
 gi|220690102|gb|EED46452.1| 40S ribosomal protein S9 [Aspergillus flavus NRRL3357]
          Length = 193

 Score = 42.6 bits (99), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFMVR 149


>gi|224142783|ref|XP_002324730.1| predicted protein [Populus trichocarpa]
 gi|118483013|gb|ABK93418.1| unknown [Populus trichocarpa]
 gi|118487957|gb|ABK95800.1| unknown [Populus trichocarpa]
 gi|118489692|gb|ABK96647.1| unknown [Populus trichocarpa x Populus deltoides]
 gi|222866164|gb|EEF03295.1| predicted protein [Populus trichocarpa]
          Length = 197

 Score = 42.6 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++A    +I  AR  +  RH+
Sbjct: 85  YGLLEESQ--------NKLDYVLALTVENFLERRLQTLVFKAGMAKSIHHARVLIKQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQVVNIPSFMVRVDSQKHI 158


>gi|312094117|ref|XP_003147914.1| 40S ribosomal protein S9 [Loa loa]
 gi|307756920|gb|EFO16154.1| 40S ribosomal protein S9 [Loa loa]
          Length = 192

 Score = 42.6 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G  G R K +       L   +K  +    + EK  R +F+        
Sbjct: 21  KERLDQELKLIGEFGLRNKREVWRVKYTLAKIRKAARTLLTLEEKDPRRLFEGNALLRRL 80

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++     +I  AR  +  +H+ V  + 
Sbjct: 81  VRIGVLSEDRMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRRQI 140

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +    K 
Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162


>gi|261332601|emb|CBH15596.1| 40S ribosomal protein S9, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 203

 Score = 42.6 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
           K  ++      G +G R K +     + L   ++  +    + E   R + + +   R  
Sbjct: 33  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 92

Query: 84  TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
             +  +                  LE RL T+V++     ++  +R  +  RH+ V  + 
Sbjct: 93  HGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQI 152

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 153 VTIPSFIVRVSSEHHI 168


>gi|90819966|gb|ABD98740.1| putative S9e ribosomal protein [Graphocephala atropunctata]
          Length = 193

 Score = 42.6 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF--------- 74
           K+ ++      G +G R K +       L   +K  +    + EK  R +F         
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDQRRLFNGNALLRRL 82

Query: 75  -------KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                  +   +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDENRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|242812657|ref|XP_002486003.1| 40S ribosomal protein S9 [Talaromyces stipitatus ATCC 10500]
 gi|218714342|gb|EED13765.1| 40S ribosomal protein S9 [Talaromyces stipitatus ATCC 10500]
          Length = 192

 Score = 42.6 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ SY  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSYMVR 149


>gi|57231021|gb|AAW47271.1| ribosomal protein S4 [Eichhornia crassipes]
          Length = 311

 Score = 42.6 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 43  SKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYR 102
            +     ++ +  +K+  +YGD+  ++     +             +   E+R D I  R
Sbjct: 43  RENRNSNIKSQTTRKLPLFYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVR 96

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             F  T+  ARQ ++HR V VN   V+I  ++   GD I   + 
Sbjct: 97  LHFSDTLPQARQPISHRRVCVNNGLVSITHFQVSHGDQISFHEN 140


>gi|37784200|gb|AAP44421.1| 40S ribosomal protein S9 [Lactuca saligna]
          Length = 124

 Score = 42.6 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++     +I  AR  +  RH+
Sbjct: 16  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIKQRHI 67

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 68  RVGRQVVNVPSFMVRVDSQKHI 89


>gi|71747500|ref|XP_822805.1| 40S ribosomal protein S9 [Trypanosoma brucei TREU927]
 gi|72392295|ref|XP_846948.1| 40S ribosomal protein S9 [Trypanosoma brucei TREU927]
 gi|140207|sp|P17959|RS9_TRYBB RecName: Full=Probable 40S ribosomal protein S9
 gi|10399|emb|CAA36818.1| unnamed protein product [Trypanosoma brucei]
 gi|62176199|gb|AAX70315.1| 40S ribosomal protein S9, putative [Trypanosoma brucei]
 gi|70802978|gb|AAZ12882.1| 40S ribosomal protein S9, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|70832473|gb|EAN77977.1| 40S ribosomal protein S9, putative [Trypanosoma brucei]
 gi|261330133|emb|CBH13117.1| 40S ribosomal protein S9, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 190

 Score = 42.6 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
           K  ++      G +G R K +     + L   ++  +    + E   R + + +   R  
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 84  TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
             +  +                  LE RL T+V++     ++  +R  +  RH+ V  + 
Sbjct: 80  HGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSEHHI 155


>gi|329350656|gb|AEB91336.1| ribosomal protein S4 [Hypacanthium evidens]
          Length = 45

 Score = 42.6 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|322490706|emb|CBZ25968.1| putative 40S ribosomal protein S9 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 189

 Score = 42.6 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     + L   ++  +    + E   R + +        
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRC 79

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E D+     S  +   LE RL TIV++A    ++  AR  +  RH+ V  + 
Sbjct: 80  HEYGFLDEEKDKLDYVLSLTVPDILERRLQTIVFKAGLAKSVHHARVLIQQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSERHI 155


>gi|170578608|ref|XP_001894478.1| 40S ribosomal protein S9 [Brugia malayi]
 gi|158598917|gb|EDP36682.1| 40S ribosomal protein S9, putative [Brugia malayi]
          Length = 192

 Score = 42.6 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G  G R K +       L   +K  +    + EK  R +F+        
Sbjct: 21  KERLDQELKLIGEFGLRNKREVWRVKYTLAKIRKAARTLLTLEEKDPRRLFEGNALLRRL 80

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++     +I  AR  +  +H+ V  + 
Sbjct: 81  VRIGVLSEDRMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRRQI 140

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +    K 
Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162


>gi|313219379|emb|CBY16469.1| unnamed protein product [Oikopleura dioica]
          Length = 100

 Score = 42.6 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ SY  +  
Sbjct: 2   KLDHVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNVPSYVVRLD 61

Query: 139 DVIEVKQKSKQ 149
               +    + 
Sbjct: 62  SQKHIDFSLRS 72


>gi|37784188|gb|AAP44415.1| 40S ribosomal protein S9 [Lactuca sativa]
 gi|37784190|gb|AAP44416.1| 40S ribosomal protein S9 [Lactuca sativa]
 gi|37784192|gb|AAP44417.1| 40S ribosomal protein S9 [Lactuca sativa]
 gi|37784194|gb|AAP44418.1| 40S ribosomal protein S9 [Lactuca serriola]
 gi|37784196|gb|AAP44419.1| 40S ribosomal protein S9 [Lactuca saligna]
 gi|37784198|gb|AAP44420.1| 40S ribosomal protein S9 [Lactuca saligna]
          Length = 143

 Score = 42.6 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++     +I  AR  +  RH+
Sbjct: 35  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIKQRHI 86

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 87  RVGRQVVNVPSFMVRVDSQKHI 108


>gi|115278556|ref|YP_762343.1| ribosomal protein S4 [Sorghum bicolor]
 gi|114309677|gb|ABI60894.1| ribosomal protein S4 [Sorghum bicolor]
          Length = 383

 Score = 42.6 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
           K +     ++ +  +K+  YYGD+  +K     +             +   E+R D I  
Sbjct: 45  KRENLNSNIKSQTTRKLSLYYGDLPIRKMHRGRERTSYIP------FLLNQETRSDVIPV 98

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           R +F  T+  ARQ ++HR V +N   V I  ++   GD+I  K+ 
Sbjct: 99  RLRFSDTLPQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143


>gi|56809869|gb|AAW31599.1| ribosomal protein S9 [Aedes albopictus]
          Length = 195

 Score = 42.6 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78
           G +G R K +       L   +K  +    + EK            R + +         
Sbjct: 34  GQYGLRNKREVWRVRYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +   AR  +  RH+ V  + VNI S+  +  
Sbjct: 94  KLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|44969159|gb|AAS49601.1| ribosomal protein S9 [Scyliorhinus canicula]
          Length = 173

 Score = 42.6 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI SY  +
Sbjct: 80  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSYIVR 139

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 140 LDSQKHIDFSLRS 152


>gi|550023|gb|AAA85659.1| ribosomal protein S9 [Homo sapiens]
 gi|1096943|prf||2113200F ribosomal protein S9
          Length = 194

 Score = 42.6 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163


>gi|60653307|gb|AAX29348.1| ribosomal protein S9 [synthetic construct]
          Length = 195

 Score = 42.6 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163


>gi|326437506|gb|EGD83076.1| 40S ribosomal protein S9 [Salpingoeca sp. ATCC 50818]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.039,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G +G R K +     L L   +K  +    + E   R +F+        
Sbjct: 27  KERLDQELKLVGEYGLRCKREVYRVKLTLAKIRKAARVLLTLEENDPRRLFEGNALLRRL 86

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   E  +        +  FLE RL T V++     ++  AR  +  RH+ V  + 
Sbjct: 87  LRIGVLDEEHMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSVHHARVLIRQRHIRVRKQL 146

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +   +K 
Sbjct: 147 VNVPSFTVRVDSAKHIDFSAKS 168


>gi|81176536|ref|YP_398420.1| rps4 [Triticum aestivum]
 gi|78675260|dbj|BAE47685.1| rps4 [Triticum aestivum]
 gi|169649069|gb|ACA62630.1| rps4 [Triticum aestivum]
          Length = 357

 Score = 42.2 bits (98), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 13/147 (8%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
           + +     ++ +  +K+  YYGD+  ++     +             +   E+R D I  
Sbjct: 45  RRENRNSNIKSQTTRKLSLYYGDLPIREMHRGRELTSYIP------FLLNQETRSDVIPV 98

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE 161
           R  F  T+  ARQ ++HR V +N   V I   +   GD+I  K+   +            
Sbjct: 99  RLHFSDTLPQARQPISHRRVCLNNGLVTITHLKVSHGDLISFKENDARTRGFEIRRSF-- 156

Query: 162 RDVPEYISVNHDNMVATFVRIPSSLKD 188
                YI ++   ++  F+   S  K 
Sbjct: 157 -----YIDISVGKIIGKFLSAISVGKR 178


>gi|108742528|gb|ABG01900.1| S9 ribosomal protein [Gryllus rubens]
          Length = 177

 Score = 42.2 bits (98), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 95  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 154

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 155 LDSQKHIDFSLKS 167


>gi|14141193|ref|NP_001004.2| 40S ribosomal protein S9 [Homo sapiens]
 gi|33504483|ref|NP_084043.1| 40S ribosomal protein S9 [Mus musculus]
 gi|110347598|ref|NP_112370.2| 40S ribosomal protein S9 [Rattus norvegicus]
 gi|155372029|ref|NP_001094622.1| 40S ribosomal protein S9 [Bos taurus]
 gi|281182503|ref|NP_001162349.1| 40S ribosomal protein S9 [Papio anubis]
 gi|284005038|ref|NP_001164865.1| 40S ribosomal protein S9 [Oryctolagus cuniculus]
 gi|73947567|ref|XP_533590.2| PREDICTED: similar to 40S ribosomal protein S9 [Canis familiaris]
 gi|109126024|ref|XP_001082895.1| PREDICTED: 40S ribosomal protein S9 [Macaca mulatta]
 gi|114679016|ref|XP_001174947.1| PREDICTED: similar to Ribosomal protein S9 isoform 4 [Pan
           troglodytes]
 gi|114679018|ref|XP_001174948.1| PREDICTED: similar to Ribosomal protein S9 isoform 5 [Pan
           troglodytes]
 gi|114679020|ref|XP_001174951.1| PREDICTED: similar to Ribosomal protein S9 isoform 6 [Pan
           troglodytes]
 gi|114679022|ref|XP_001174953.1| PREDICTED: similar to Ribosomal protein S9 isoform 7 [Pan
           troglodytes]
 gi|149722554|ref|XP_001488074.1| PREDICTED: similar to ribosomal protein S9 [Equus caballus]
 gi|296234591|ref|XP_002762521.1| PREDICTED: 40S ribosomal protein S9-like [Callithrix jacchus]
 gi|297705863|ref|XP_002829779.1| PREDICTED: 40S ribosomal protein S9-like [Pongo abelii]
 gi|301785199|ref|XP_002928005.1| PREDICTED: 40S ribosomal protein S9-like [Ailuropoda melanoleuca]
 gi|20178311|sp|P46781|RS9_HUMAN RecName: Full=40S ribosomal protein S9
 gi|52783339|sp|Q6ZWN5|RS9_MOUSE RecName: Full=40S ribosomal protein S9
 gi|52788199|sp|P29314|RS9_RAT RecName: Full=40S ribosomal protein S9
 gi|182705273|sp|A9L913|RS9_PAPAN RecName: Full=40S ribosomal protein S9
 gi|189044386|sp|A6QLG5|RS9_BOVIN RecName: Full=40S ribosomal protein S9
 gi|12654005|gb|AAH00802.1| Ribosomal protein S9 [Homo sapiens]
 gi|13938523|gb|AAH07410.1| Ribosomal protein S9 [Homo sapiens]
 gi|13938567|gb|AAH07434.1| Ribosomal protein S9 [Homo sapiens]
 gi|14043812|gb|AAH07857.1| Ribosomal protein S9 [Homo sapiens]
 gi|17932972|dbj|BAB79477.1| ribosomal protein S9 [Homo sapiens]
 gi|26341336|dbj|BAC34330.1| unnamed protein product [Mus musculus]
 gi|26349443|dbj|BAC38361.1| unnamed protein product [Mus musculus]
 gi|38014582|gb|AAH60560.1| Ribosomal protein S9 [Rattus norvegicus]
 gi|45786140|gb|AAH68055.1| Ribosomal protein S9 [Homo sapiens]
 gi|48734872|gb|AAH71940.1| Ribosomal protein S9 [Homo sapiens]
 gi|60656367|gb|AAX32747.1| ribosomal protein S9 [synthetic construct]
 gi|67678154|gb|AAH96756.1| Ribosomal protein S9 [Homo sapiens]
 gi|74178152|dbj|BAE29863.1| unnamed protein product [Mus musculus]
 gi|74181488|dbj|BAE30013.1| unnamed protein product [Mus musculus]
 gi|74181562|dbj|BAE30046.1| unnamed protein product [Mus musculus]
 gi|74196003|dbj|BAE30558.1| unnamed protein product [Mus musculus]
 gi|119592615|gb|EAW72209.1| ribosomal protein S9, isoform CRA_a [Homo sapiens]
 gi|119592617|gb|EAW72211.1| ribosomal protein S9, isoform CRA_a [Homo sapiens]
 gi|123980594|gb|ABM82126.1| ribosomal protein S9 [synthetic construct]
 gi|123995415|gb|ABM85309.1| ribosomal protein S9 [synthetic construct]
 gi|148699250|gb|EDL31197.1| mCG18481, isoform CRA_a [Mus musculus]
 gi|149029793|gb|EDL84925.1| rCG56820 [Rattus norvegicus]
 gi|151554648|gb|AAI47957.1| RPS9 protein [Bos taurus]
 gi|151554779|gb|AAI48017.1| RPS9 protein [Bos taurus]
 gi|159571311|emb|CAP19125.1| ribosomal protein S9 [Homo sapiens]
 gi|160904191|gb|ABX52176.1| ribosomal protein S9 (predicted) [Papio anubis]
 gi|167427248|gb|ABZ80228.1| ribosomal protein S9 (predicted) [Callithrix jacchus]
 gi|169158361|emb|CAQ09597.1| ribosomal protein S9 [Homo sapiens]
 gi|184185529|gb|ACC68931.1| ribosomal protein S9 (predicted) [Rhinolophus ferrumequinum]
 gi|190576593|gb|ACE79082.1| ribosomal protein S9 (predicted) [Sorex araneus]
 gi|197215709|gb|ACH53097.1| ribosomal protein S9 (predicted) [Otolemur garnettii]
 gi|208967336|dbj|BAG73682.1| ribosomal protein S9 [synthetic construct]
 gi|217418300|gb|ACK44303.1| ribosomal protein S9 (predicted) [Oryctolagus cuniculus]
 gi|229368769|gb|ACQ63049.1| ribosomal protein S9 (predicted) [Dasypus novemcinctus]
 gi|281354542|gb|EFB30126.1| hypothetical protein PANDA_017891 [Ailuropoda melanoleuca]
 gi|296477219|gb|DAA19334.1| 40S ribosomal protein S9 [Bos taurus]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163


>gi|322227675|gb|ADW95299.1| ribosomal protein S4 [Allium roseum]
 gi|322227677|gb|ADW95300.1| ribosomal protein S4 [Allium roseum]
 gi|322227679|gb|ADW95301.1| ribosomal protein S4 [Allium roseum]
          Length = 28

 Score = 42.2 bits (98), Expect = 0.040,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K  RR+G       K P
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRP 26


>gi|307202013|gb|EFN81577.1| 40S ribosomal protein S9 [Harpegnathos saltator]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +  
Sbjct: 94  KLDYVLGLKIEDFLERRLQTQVFKMGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|62083481|gb|AAX62465.1| ribosomal protein S9 [Lysiphlebus testaceipes]
 gi|62083483|gb|AAX62466.1| ribosomal protein S9 variant 1 [Lysiphlebus testaceipes]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK+ + +F+        
Sbjct: 23  KARLDQELKVIGEYGLRNKREVWRVKYTLAKIRKAARELLTLDEKEPKRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|21594169|gb|AAH31746.1| Ribosomal protein S9 [Mus musculus]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 142 VNIPSFIVR 150


>gi|307182078|gb|EFN69456.1| 40S ribosomal protein S9 [Camponotus floridanus]
 gi|322799909|gb|EFZ21050.1| hypothetical protein SINV_10506 [Solenopsis invicta]
 gi|332017469|gb|EGI58192.1| 40S ribosomal protein S9 [Acromyrmex echinatior]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +  
Sbjct: 94  KLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|213510684|dbj|BAG84561.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|213510686|dbj|BAG84562.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|213510688|dbj|BAG84563.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|213510690|dbj|BAG84564.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|213510692|dbj|BAG84565.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488789|dbj|BAJ05251.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488791|dbj|BAJ05252.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488793|dbj|BAJ05253.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488795|dbj|BAJ05254.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488797|dbj|BAJ05255.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488799|dbj|BAJ05256.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488801|dbj|BAJ05257.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488803|dbj|BAJ05258.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488805|dbj|BAJ05259.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488807|dbj|BAJ05260.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488809|dbj|BAJ05261.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488811|dbj|BAJ05262.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488813|dbj|BAJ05263.1| ribosomal protein S4 [Gentiana thunbergii]
 gi|294488815|dbj|BAJ05264.1| ribosomal protein S4 [Gentiana zollingeri]
          Length = 33

 Score = 42.2 bits (98), Expect = 0.040,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 3/33 (9%)

Query: 174 NMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                  +I  S       + +   LVVE+YSR
Sbjct: 2   QYKGLVNQIIDSK---WVGLKINELLVVEYYSR 31


>gi|193580101|ref|XP_001945527.1| PREDICTED: 40S ribosomal protein S9-like [Acyrthosiphon pisum]
          Length = 197

 Score = 42.2 bits (98), Expect = 0.040,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKE------ADRSRGDTSHNLISFLESRLDTIVYRA 103
           L L  K + + + G+      R + +         +        +  FLE RL T V++ 
Sbjct: 62  LTLEEKDQKRLFEGNAL---LRRLVRIGVLDEGRMKLDYVLGLKIEDFLERRLQTQVFKL 118

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
               +I  AR  +  RH+ V  + VN+ S+  +      +    K 
Sbjct: 119 GLAKSIHHARVLIRQRHIRVRKQVVNVPSFIVRLDSQKHIDFSLKS 164


>gi|55661270|ref|XP_515154.1| PREDICTED: similar to Ribosomal protein S9 isoform 2 [Pan
           troglodytes]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 142 VNIPSFIVR 150


>gi|125977176|ref|XP_001352621.1| GA28351 [Drosophila pseudoobscura pseudoobscura]
 gi|195168054|ref|XP_002024847.1| GL17960 [Drosophila persimilis]
 gi|195178296|ref|XP_002029028.1| GL20135 [Drosophila persimilis]
 gi|195191346|ref|XP_002029552.1| GL21280 [Drosophila persimilis]
 gi|54641369|gb|EAL30119.1| GA28351 [Drosophila pseudoobscura pseudoobscura]
 gi|194103695|gb|EDW25738.1| GL21280 [Drosophila persimilis]
 gi|194108277|gb|EDW30320.1| GL17960 [Drosophila persimilis]
 gi|194117383|gb|EDW39426.1| GL20135 [Drosophila persimilis]
          Length = 195

 Score = 42.2 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|310794041|gb|EFQ29502.1| ribosomal protein S4 [Glomerella graminicola M1.001]
          Length = 191

 Score = 42.2 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147


>gi|197127111|gb|ACH43609.1| putative 40S ribosomal protein S9 [Taeniopygia guttata]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163


>gi|193290618|gb|ACF17617.1| S-9 [Tursiops truncatus]
          Length = 161

 Score = 42.2 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 15  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 74

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 75  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 134

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 135 VNIPSFIVRLDSQKHIDFSLRS 156


>gi|91089607|ref|XP_967635.1| PREDICTED: similar to S9e ribosomal protein isoform 1 [Tribolium
           castaneum]
 gi|270012619|gb|EFA09067.1| hypothetical protein TcasGA2_TC006782 [Tribolium castaneum]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  + +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDPKRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDENRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFIVRLDSQKHIDFSLKS 164


>gi|189342370|gb|ACD91764.1| ribosomal protein S4 [Cousinia lepida]
          Length = 45

 Score = 42.2 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNT 29
          MS+    + K  RR+G       K P   
Sbjct: 1  MSRYRGPRFKKIRRLGALPGLTNKRPRXR 29


>gi|156361995|ref|XP_001625568.1| predicted protein [Nematostella vectensis]
 gi|156212407|gb|EDO33468.1| predicted protein [Nematostella vectensis]
          Length = 190

 Score = 42.2 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  +N      G +G R K +     L L   +K  +    + EK  R +F+        
Sbjct: 19  KERLNQELKIIGEYGLRNKREVWRVKLTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 78

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 79  VRIGVLDESRMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQL 138

Query: 128 VNIGSY 133
           VN+ S+
Sbjct: 139 VNVPSF 144


>gi|126133865|ref|XP_001383457.1| hypothetical protein PICST_77059 [Scheffersomyces stipitis CBS
           6054]
 gi|126095606|gb|ABN65428.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 189

 Score = 42.2 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 8/87 (9%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G +SE K +  +  A R           FLE RL T V++     +I  AR  +  RH+ 
Sbjct: 84  GVLSEDKMKLDYVLALRIED--------FLERRLQTQVFKLGLARSIHHARVLITQRHIA 135

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           V  + VNI S+  +      +      
Sbjct: 136 VGKQIVNIPSFTVRLDSQKHIDFAHNS 162


>gi|67537266|ref|XP_662407.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Aspergillus nidulans FGSC
           A4]
 gi|40741183|gb|EAA60373.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Aspergillus nidulans FGSC
           A4]
 gi|259482350|tpe|CBF76749.1| TPA: hypothetical protein similar to 40S ribosomal protein S9
           (Broad) [Aspergillus nidulans FGSC A4]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ SY  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149


>gi|320168060|gb|EFW44959.1| S9 ribosomal protein [Capsaspora owczarzaki ATCC 30864]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
             R        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 93  RMRLDFVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 149


>gi|299469776|emb|CBN76630.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             LE RL T V++     +I  AR  + HRH+ V  + VN+  +  +      +
Sbjct: 105 KMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHI 158


>gi|255626239|gb|ACU13464.1| unknown [Glycine max]
          Length = 197

 Score = 42.2 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  R
Sbjct: 83  FRYGLLDETQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQR 134

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143
           H+ V  + VNI S+  +      +
Sbjct: 135 HIRVGRQVVNIPSFMVRVDSQKHI 158


>gi|119192000|ref|XP_001246606.1| 40S ribosomal protein S9 [Coccidioides immitis RS]
 gi|303313185|ref|XP_003066604.1| 40S ribosomal protein S9, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106266|gb|EER24459.1| 40S ribosomal protein S9, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320036503|gb|EFW18442.1| 40S ribosomal protein S9 [Coccidioides posadasii str. Silveira]
          Length = 190

 Score = 42.2 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDT 84
           N R          +  + +   L L  K   + + G+   ++      + +   +     
Sbjct: 36  NKREVWRVQLTLSKIRRAARELLTLEEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVL 95

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +  +  FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 96  ALKVEDFLERRLQTQVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147


>gi|157123910|ref|XP_001653969.1| 40S ribosomal protein S9 [Aedes aegypti]
 gi|94468470|gb|ABF18084.1| ribosomal protein S4 [Aedes aegypti]
 gi|108882871|gb|EAT47096.1| 40S ribosomal protein S9 [Aedes aegypti]
          Length = 195

 Score = 42.2 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78
           G +G R K +       L   +K  +    + EK            R + +         
Sbjct: 34  GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +   AR  +  RH+ V  + VNI S+  +  
Sbjct: 94  KLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|325188058|emb|CCA22601.1| 40S ribosomal protein S91 putative [Albugo laibachii Nc14]
          Length = 194

 Score = 42.2 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 3/111 (2%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85
            R      +   +  K +   L L AK   + + G    ++ +      +E +       
Sbjct: 41  KREIWRVQYALSKLRKAARELLTLDAKDPKRLFEGAALLRRLKRYGLLTEEENELDFVLR 100

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            N+   LE RL T V++     +I  AR  +  RH+ V  + V++ S+  +
Sbjct: 101 LNVQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVR 151


>gi|145234288|ref|XP_001400515.1| 40S ribosomal protein S9 [Aspergillus niger CBS 513.88]
 gi|134057460|emb|CAK37968.1| unnamed protein product [Aspergillus niger]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ SY  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149


>gi|119492999|ref|XP_001263755.1| 40S ribosomal protein S9 [Neosartorya fischeri NRRL 181]
 gi|119411915|gb|EAW21858.1| 40S ribosomal protein S9 [Neosartorya fischeri NRRL 181]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ SY  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149


>gi|115402469|ref|XP_001217311.1| 40S ribosomal protein S9 [Aspergillus terreus NIH2624]
 gi|114189157|gb|EAU30857.1| 40S ribosomal protein S9 [Aspergillus terreus NIH2624]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ SY  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSYMVR 149


>gi|114679028|ref|XP_001174932.1| PREDICTED: similar to Ribosomal protein S9 isoform 2 [Pan
           troglodytes]
 gi|119592621|gb|EAW72215.1| ribosomal protein S9, isoform CRA_f [Homo sapiens]
          Length = 153

 Score = 42.2 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 50  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 109

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 110 LDSQKHIDFSLRS 122


>gi|312214837|emb|CBX94791.1| similar to 40S ribosomal protein S9 [Leptosphaeria maculans]
          Length = 192

 Score = 42.2 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 147


>gi|260817473|ref|XP_002603611.1| hypothetical protein BRAFLDRAFT_126921 [Branchiostoma floridae]
 gi|229288931|gb|EEN59622.1| hypothetical protein BRAFLDRAFT_126921 [Branchiostoma floridae]
          Length = 193

 Score = 42.2 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           K  ++      G +G R K +     L L   +K  +    + EK  R +F+        
Sbjct: 20  KERLDQELKLIGEYGLRNKREVWRVKLTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 79

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 80  VRVGVLDEGKMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQL 139

Query: 128 VNIGSYRCKEGDVIEV 143
           VNI SY  +      +
Sbjct: 140 VNIPSYVVRVDSQKHI 155


>gi|194747739|ref|XP_001956309.1| GF24655 [Drosophila ananassae]
 gi|195428917|ref|XP_002062512.1| GK17575 [Drosophila willistoni]
 gi|190623591|gb|EDV39115.1| GF24655 [Drosophila ananassae]
 gi|194158597|gb|EDW73498.1| GK17575 [Drosophila willistoni]
          Length = 195

 Score = 42.2 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|315047058|ref|XP_003172904.1| 40S ribosomal protein S9 [Arthroderma gypseum CBS 118893]
 gi|311343290|gb|EFR02493.1| 40S ribosomal protein S9 [Arthroderma gypseum CBS 118893]
          Length = 191

 Score = 42.2 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144


>gi|152990876|ref|YP_001356598.1| hemolysin A [Nitratiruptor sp. SB155-2]
 gi|151422737|dbj|BAF70241.1| hemolysin A [Nitratiruptor sp. SB155-2]
          Length = 234

 Score = 42.2 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  +Y+  F  +   A + +    V V+G+ V   S+  ++G+V    +     A+ 
Sbjct: 1   MRLDKYLYQKGFTSSRNKAAELIREGLVSVDGKVVTKPSFELQKGEVSIKAKPYVSRAAY 60

Query: 154 L 154
            
Sbjct: 61  K 61


>gi|326471518|gb|EGD95527.1| ribosomal protein S9 [Trichophyton tonsurans CBS 112818]
 gi|326481818|gb|EGE05828.1| ribosomal protein S9 [Trichophyton equinum CBS 127.97]
          Length = 191

 Score = 42.2 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|296804202|ref|XP_002842953.1| 40S ribosomal protein S9 [Arthroderma otae CBS 113480]
 gi|238845555|gb|EEQ35217.1| 40S ribosomal protein S9 [Arthroderma otae CBS 113480]
          Length = 191

 Score = 42.2 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144


>gi|121544013|gb|ABM55670.1| putative ribosomal protein S9 [Maconellicoccus hirsutus]
          Length = 195

 Score = 41.8 bits (97), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK+ + +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLDEKEPKRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL+T V++     +I  AR  +  RH+ V+ + 
Sbjct: 83  VRIGVLDENRMKLDYVLGLKIEDFLERRLETQVFKLGLAKSIHHARVLIRQRHIRVHKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +    K 
Sbjct: 143 VNVPSFIVRLDSQKHIDFSLKS 164


>gi|226475658|emb|CAX77878.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
          Length = 150

 Score = 41.8 bits (97), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + ++  +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN   
Sbjct: 44  LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 103

Query: 133 YRCK 136
           +  +
Sbjct: 104 FMVR 107


>gi|255944121|ref|XP_002562828.1| Pc20g02740 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587563|emb|CAP85603.1| Pc20g02740 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 190

 Score = 41.8 bits (97), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFMVR 147


>gi|327305937|ref|XP_003237660.1| ribosomal protein S4 [Trichophyton rubrum CBS 118892]
 gi|326460658|gb|EGD86111.1| ribosomal protein S4 [Trichophyton rubrum CBS 118892]
          Length = 191

 Score = 41.8 bits (97), Expect = 0.051,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VYR     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTCVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|255552894|ref|XP_002517490.1| 40S ribosomal protein S9, putative [Ricinus communis]
 gi|223543501|gb|EEF45032.1| 40S ribosomal protein S9, putative [Ricinus communis]
          Length = 196

 Score = 41.8 bits (97), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 3/118 (2%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85
            R      +   R    +   L L  K   + + G+   ++        +  ++     +
Sbjct: 41  KRELWRVQYALSRIRNAARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLA 100

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             + +FLE RL T+V+++    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 101 LTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHI 158


>gi|110671456|gb|ABG81979.1| putative ribosomal protein S9 [Diaphorina citri]
          Length = 195

 Score = 41.8 bits (97), Expect = 0.051,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK+ R +F+        
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKEQRRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSY 133
           VNI S+
Sbjct: 143 VNIPSF 148


>gi|226475656|emb|CAX77877.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
          Length = 150

 Score = 41.8 bits (97), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + ++  +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN   
Sbjct: 44  LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 103

Query: 133 YRCK 136
           +  +
Sbjct: 104 FMVR 107


>gi|209876962|ref|XP_002139923.1| 40S ribosomal protein S9 [Cryptosporidium muris RN66]
 gi|209555529|gb|EEA05574.1| 40S ribosomal protein S9, putative [Cryptosporidium muris RN66]
          Length = 189

 Score = 41.8 bits (97), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 78  DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            +        +  FLE RL T V++     +I  AR  +   H+ V  + VN+ S+  +
Sbjct: 91  RKLDYVLGLTVNKFLERRLQTRVFKLGLAKSIHHARVLIRQHHIRVGRQIVNVPSFMVR 149


>gi|194468386|ref|ZP_03074372.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23]
 gi|194453239|gb|EDX42137.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23]
          Length = 261

 Score = 41.8 bits (97), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           + +    + +    RLD +V  A F  +   A+Q + H  V +N   ++   Y+    D+
Sbjct: 171 KEEWVPIVTTVSSLRLD-VVVAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDL 229

Query: 141 IEVKQKSKQLASVLEASQLAERD 163
           I V+   +    +       +++
Sbjct: 230 ISVRHGGRLRIDMTNGKTKKDKE 252


>gi|147906789|ref|NP_001085809.1| ribosomal protein S9 [Xenopus laevis]
 gi|49115440|gb|AAH73375.1| MGC80804 protein [Xenopus laevis]
          Length = 194

 Score = 41.8 bits (97), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|148232254|ref|NP_001080124.1| ribosomal protein S9 [Xenopus laevis]
 gi|27735416|gb|AAH41242.1| Rps9-prov protein [Xenopus laevis]
          Length = 194

 Score = 41.8 bits (97), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|55742356|ref|NP_001006813.1| ribosomal protein S9 [Xenopus (Silurana) tropicalis]
 gi|50368686|gb|AAH76696.1| ribosomal protein S9 [Xenopus (Silurana) tropicalis]
 gi|89271985|emb|CAJ83759.1| ribosomal protein S9 [Xenopus (Silurana) tropicalis]
          Length = 194

 Score = 41.8 bits (97), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|302419927|ref|XP_003007794.1| 40S ribosomal protein S9 [Verticillium albo-atrum VaMs.102]
 gi|261353445|gb|EEY15873.1| 40S ribosomal protein S9 [Verticillium albo-atrum VaMs.102]
          Length = 191

 Score = 41.8 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147


>gi|324518731|gb|ADY47189.1| 40S ribosomal protein S9 [Ascaris suum]
 gi|324519412|gb|ADY47375.1| 40S ribosomal protein S9 [Ascaris suum]
          Length = 192

 Score = 41.8 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K  ++      G  G R K +       L   +K  +    + EK  R +F+        
Sbjct: 21  KERLDQELKLIGEFGLRNKREVWRVKYTLAKIRKAARTLLTLEEKDPRRLFEGNALLRRL 80

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                   +  +        +  FLE RL T V++     +I  AR  +  +H+ V  + 
Sbjct: 81  VRIGVLSEDRMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRRQI 140

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +    K 
Sbjct: 141 VNVPSFIVRLDSQKHIDFSLKS 162


>gi|302807245|ref|XP_002985335.1| hypothetical protein SELMODRAFT_157263 [Selaginella moellendorffii]
 gi|302810984|ref|XP_002987182.1| hypothetical protein SELMODRAFT_235178 [Selaginella moellendorffii]
 gi|300145079|gb|EFJ11758.1| hypothetical protein SELMODRAFT_235178 [Selaginella moellendorffii]
 gi|300146798|gb|EFJ13465.1| hypothetical protein SELMODRAFT_157263 [Selaginella moellendorffii]
          Length = 198

 Score = 41.8 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD---RSRGDT 84
           N R      +   R    +   L L  K   + + GD   ++        +   +     
Sbjct: 40  NKRELWRLQYVLSRIRNAARHLLTLDEKNPRRIFEGDALLRRMHRYGLLEEGQNKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + +FLE RL T+V++A    +I  AR  V  RH+ V  + VN+ S+  +      +
Sbjct: 100 ALTVENFLERRLQTLVFKAGMAKSIHHARVLVRQRHIRVGKQMVNVPSFLVRVESQKHI 158


>gi|255073869|ref|XP_002500609.1| predicted protein [Micromonas sp. RCC299]
 gi|226515872|gb|ACO61867.1| predicted protein [Micromonas sp. RCC299]
          Length = 194

 Score = 41.8 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
            A  +    YG + E +        D+     +     FLE RL TIV++     ++  A
Sbjct: 76  EAIMRRMYRYGLLDESQ--------DKLDYVLALTPEIFLERRLQTIVFKLGLAKSVHHA 127

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           R  +  RH+ V  + VNI S+  +      +
Sbjct: 128 RVLIKQRHIRVGKQIVNIPSFLVRADSQKHI 158


>gi|189202214|ref|XP_001937443.1| 40S ribosomal protein S9 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984542|gb|EDU50030.1| 40S ribosomal protein S9 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 193

 Score = 41.8 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 102 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 148


>gi|156536971|ref|XP_001608270.1| PREDICTED: similar to S9e ribosomal protein [Nasonia vitripennis]
          Length = 193

 Score = 41.8 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 92  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 151

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 152 LDSQKHIDFSVKS 164


>gi|115744096|ref|XP_791000.2| PREDICTED: similar to Rps9-prov protein [Strongylocentrotus
           purpuratus]
 gi|115972878|ref|XP_001177022.1| PREDICTED: similar to Rps9-prov protein [Strongylocentrotus
           purpuratus]
          Length = 192

 Score = 41.8 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI SY  +
Sbjct: 88  KMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSYIVR 147

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 148 LDSQKHIDFSLRS 160


>gi|255540985|ref|XP_002511557.1| 40S ribosomal protein S9, putative [Ricinus communis]
 gi|223550672|gb|EEF52159.1| 40S ribosomal protein S9, putative [Ricinus communis]
          Length = 197

 Score = 41.8 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  RH+
Sbjct: 85  YGLLEESQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQVVNIPSFMVRIDSQKHI 158


>gi|224116676|ref|XP_002317362.1| predicted protein [Populus trichocarpa]
 gi|118482733|gb|ABK93285.1| unknown [Populus trichocarpa]
 gi|222860427|gb|EEE97974.1| predicted protein [Populus trichocarpa]
          Length = 197

 Score = 41.8 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + SFLE RL T+V++A    +I  AR  +  RH+
Sbjct: 85  YGLLEENQ--------NKLDYVLALTVESFLERRLQTLVFKAGMAKSIHHARVLIKQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  ++VNI S+  +      +
Sbjct: 137 RVGRQAVNIPSFMVRVDSQKHI 158


>gi|119592616|gb|EAW72210.1| ribosomal protein S9, isoform CRA_b [Homo sapiens]
          Length = 103

 Score = 41.8 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +  
Sbjct: 2   KLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLD 61

Query: 139 DVIEVKQKSKQ 149
               +    + 
Sbjct: 62  SQKHIDFSLRS 72


>gi|302754856|ref|XP_002960852.1| hypothetical protein SELMODRAFT_74302 [Selaginella moellendorffii]
 gi|302767484|ref|XP_002967162.1| hypothetical protein SELMODRAFT_144850 [Selaginella moellendorffii]
 gi|300165153|gb|EFJ31761.1| hypothetical protein SELMODRAFT_144850 [Selaginella moellendorffii]
 gi|300171791|gb|EFJ38391.1| hypothetical protein SELMODRAFT_74302 [Selaginella moellendorffii]
          Length = 198

 Score = 41.8 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD---RSRGDT 84
           N R      +   R    S   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYVLSRIRNASRHLLTLDEKNPRRIFEGEALLRRMHRYGLLEEGQNKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + +FLE RL T+V++A    +I  AR  V  RH+ V  + VN+ S+  +      +
Sbjct: 100 ALTVENFLERRLQTLVFKAGMAKSIHHARVLVRQRHIRVGKQMVNVPSFLVRVESQKHI 158


>gi|254566883|ref|XP_002490552.1| 40S small ribosomal subunit [Pichia pastoris GS115]
 gi|238030348|emb|CAY68271.1| 40S small ribosomal subunit [Pichia pastoris GS115]
 gi|328350941|emb|CCA37341.1| 40S ribosomal protein S9-A [Pichia pastoris CBS 7435]
          Length = 193

 Score = 41.8 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78
           G +G + K +    G QL   ++  +      EK  + +F+                E  
Sbjct: 32  GEYGLKNKKEIYRIGFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRTGILSEEKR 91

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +     +  +  FLE RL T V++     +I  AR  ++ RH+ V  + V I S+  +  
Sbjct: 92  KLDYVLALKVEDFLERRLQTQVFKLGLAKSIHHARVLISQRHIAVGKQIVTIPSFMVRLE 151

Query: 139 DVIEVKQKSKQ 149
               +   S  
Sbjct: 152 SQKHIDFASTS 162


>gi|320592633|gb|EFX05063.1| 40S ribosomal protein s9 [Grosmannia clavigera kw1407]
          Length = 191

 Score = 41.8 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T+VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQVVNVPSFIVR 147


>gi|308080984|ref|NP_001183701.1| hypothetical protein LOC100502294 [Zea mays]
 gi|238014008|gb|ACR38039.1| unknown [Zea mays]
          Length = 112

 Score = 41.8 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FL+ RL TIV++     +I  AR  +  RH+
Sbjct: 4   YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 55

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 56  RVGRQLVNIPSFMVRVESEKHI 77


>gi|300120128|emb|CBK19682.2| unnamed protein product [Blastocystis hominis]
 gi|300121727|emb|CBK22302.2| unnamed protein product [Blastocystis hominis]
 gi|300122077|emb|CBK22651.2| unnamed protein product [Blastocystis hominis]
 gi|300123433|emb|CBK24706.2| unnamed protein product [Blastocystis hominis]
 gi|300176244|emb|CBK23555.2| unnamed protein product [Blastocystis hominis]
          Length = 188

 Score = 41.8 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%)

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           +E  +       +    ++ RL T V++     +I  AR  +  RH+ V  + VN  S+ 
Sbjct: 90  EEEMKLDMILELSTSKLMDRRLQTRVFKLGLAKSIHHARVLIKQRHIRVGQQVVNAPSFM 149

Query: 135 CKEGDVIEVKQKSKQ 149
                   ++     
Sbjct: 150 VHVDSEKHIQFAENS 164


>gi|38047837|gb|AAR09821.1| similar to Drosophila melanogaster RpS9 [Drosophila yakuba]
          Length = 191

 Score = 41.8 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|327282332|ref|XP_003225897.1| PREDICTED: 40S ribosomal protein S9-like [Anolis carolinensis]
          Length = 194

 Score = 41.8 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|328899855|gb|AEB54651.1| ribosomal protein S9 [Procambarus clarkii]
          Length = 198

 Score = 41.8 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +           FLE RL T V++     +I  AR  +   H+ V  + VN+ S+  +
Sbjct: 92  RMKLDYVLGLKPEDFLERRLQTQVFKLGLAKSIHHARVLIKQGHIRVRKQVVNVPSFIVR 151

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 152 LDSQKHIDFSLKS 164


>gi|221132432|ref|XP_002156853.1| PREDICTED: similar to 40S ribosomal protein S9 [Hydra
           magnipapillata]
          Length = 190

 Score = 41.8 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  +H+ V  + VNI S+  +
Sbjct: 88  RMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQKHIRVRKQLVNIPSFIVR 147


>gi|169596444|ref|XP_001791646.1| hypothetical protein SNOG_00985 [Phaeosphaeria nodorum SN15]
 gi|111071360|gb|EAT92480.1| hypothetical protein SNOG_00985 [Phaeosphaeria nodorum SN15]
          Length = 192

 Score = 41.8 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVR 147


>gi|85375453|ref|YP_459515.1| S4 domain-containing protein [Erythrobacter litoralis HTCC2594]
 gi|84788536|gb|ABC64718.1| S4 domain protein [Erythrobacter litoralis HTCC2594]
          Length = 103

 Score = 41.8 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            R+D ++ R +F  T  AAR  +   H+  NGR V   S+   EGD++ V     +   V
Sbjct: 1   MRIDLVLCRLRFFKTRSAARNLIEAGHLRANGRRVVQVSHPVAEGDILTVPLG--KSVVV 58

Query: 154 LEASQLAERDVPE 166
           +E   L ER  P 
Sbjct: 59  IEILHLPERRGPA 71


>gi|225719318|gb|ACO15505.1| 40S ribosomal protein S9 [Caligus clemensi]
          Length = 190

 Score = 41.8 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 21/153 (13%)

Query: 18  NLWGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
            ++  P+ P             G +G R K +       L   +K  +    + EK  R 
Sbjct: 12  KVFATPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLEEKDPRR 71

Query: 73  IFK----------------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           +F+                   +        +  FLE RL T V++     +I  AR  +
Sbjct: 72  LFEGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 131

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             RH+ V  + VN+ S+  +      +    K 
Sbjct: 132 RQRHIRVRKQVVNVPSFVVRLDSQKHIDFSLKS 164


>gi|149185282|ref|ZP_01863599.1| S4 domain protein [Erythrobacter sp. SD-21]
 gi|148831393|gb|EDL49827.1| S4 domain protein [Erythrobacter sp. SD-21]
          Length = 85

 Score = 41.8 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            R+D ++   +FV T  AAR+ V+  H+  NG  V   S     GDV+ +     +   +
Sbjct: 1   MRIDRLLCTLRFVRTRSAARKLVDQGHIRRNGERVLRPSRDIAVGDVLTLPVG--RHVKL 58

Query: 154 LEASQLAERDVPE 166
           +E  QL ER  P 
Sbjct: 59  IEVLQLPERRGPP 71


>gi|50404046|gb|AAT76788.1| 40S ribosomal protein S9 [Corbicula fluminea]
          Length = 192

 Score = 41.8 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
             +           FLE RL T V++     +I  AR  +  RH+ V  + VNI S+
Sbjct: 90  KMKLDFVLGLRTEDFLERRLQTQVFKLGLAKSIHHARILIRQRHIRVRKQVVNIPSF 146


>gi|6978050|gb|AAF34260.1| truncated ribosomal protein small subunit 4 [Pteridium aquilinum
          subsp. decompositum]
          Length = 68

 Score = 41.8 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%)

Query: 4  RESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
              + K+ RR+        +   +          Q    K S F ++L AKQ+++  YG
Sbjct: 5  YRGPRLKLIRRLKNLPGLAGRGKTSNLGEIRVATDQSTSRKISQFCVRLEAKQRLRFNYG 64


>gi|171676139|ref|XP_001903023.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936135|emb|CAP60795.1| unnamed protein product [Podospora anserina S mat+]
          Length = 220

 Score = 41.4 bits (96), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T+VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|296423828|ref|XP_002841454.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637694|emb|CAZ85645.1| unnamed protein product [Tuber melanosporum]
          Length = 195

 Score = 41.4 bits (96), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 105 DFLERRLQTQVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 151


>gi|258515777|ref|YP_003191999.1| hemolysin A [Desulfotomaculum acetoxidans DSM 771]
 gi|257779482|gb|ACV63376.1| hemolysin A [Desulfotomaculum acetoxidans DSM 771]
          Length = 269

 Score = 41.4 bits (96), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           RLD  + R  F P+   AR  +    + VN + ++    +   G  +EV+  +
Sbjct: 7   RLDNFLVREGFFPSREKARSAIMAGLIYVNDQRMDKAGTQVSSGVQVEVRGNA 59


>gi|242020437|ref|XP_002430661.1| 40S ribosomal protein S9, putative [Pediculus humanus corporis]
 gi|212515836|gb|EEB17923.1| 40S ribosomal protein S9, putative [Pediculus humanus corporis]
          Length = 194

 Score = 41.4 bits (96), Expect = 0.065,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDGKRLFEGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIQVRKQV 142

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 143 VNIPSFIVR 151


>gi|255640554|gb|ACU20562.1| unknown [Glycine max]
          Length = 197

 Score = 41.4 bits (96), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  R
Sbjct: 83  FRYGLLDETQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQR 134

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEV 143
           H+ V  + VNI S+  +      +
Sbjct: 135 HIRVGRQVVNIPSFLVRVDSQKHI 158


>gi|50412884|ref|XP_457175.1| DEHA2B04906p [Debaryomyces hansenii CBS767]
 gi|49652840|emb|CAG85170.1| DEHA2B04906p [Debaryomyces hansenii]
          Length = 190

 Score = 41.4 bits (96), Expect = 0.066,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78
           G +G + K +    G QL   ++  +      EK  + +F+                +  
Sbjct: 32  GEYGLKNKREIYRIGFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRTGVLSEDKM 91

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +     +     FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +  
Sbjct: 92  KLDYVLALQPEDFLERRLQTQVFKLGLARSIHHARVLITQRHIAVGKQIVNVPSFMVRLD 151

Query: 139 DVIEVKQKSKQ 149
               +      
Sbjct: 152 SQKHIDFAHNS 162


>gi|149202304|ref|ZP_01879277.1| RNA-binding S4 [Roseovarius sp. TM1035]
 gi|149144402|gb|EDM32433.1| RNA-binding S4 [Roseovarius sp. TM1035]
          Length = 126

 Score = 41.4 bits (96), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + RLD  ++ A+F  T   + + ++  HV VNG  V   +     GDV+   Q ++    
Sbjct: 7   KIRLDKWLWHARFFKTRTLSAKEISAGHVRVNGARVTKPAQAVGPGDVLTFAQATRVWVV 66

Query: 153 VLEASQLAERDVPE 166
            + A        PE
Sbjct: 67  RIAALGTRRGPAPE 80


>gi|57231023|gb|AAW47272.1| ribosomal protein S4 [Laurus nobilis]
          Length = 311

 Score = 41.4 bits (96), Expect = 0.067,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 23/171 (13%)

Query: 22  RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSR 81
             K  +  + Y           +     ++ +  +K+  ++GD+   +     +      
Sbjct: 27  NKKRSIKRKIYP---------RQNLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIP 77

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
                      E+R D I  R  F  TI  ARQ ++HR V VN   V+I   +   GD+I
Sbjct: 78  ------FPLNPETRSDVIPVRLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLI 131

Query: 142 EVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATF-VRIPSSLKDVPY 191
             ++   +                 YI ++ +  +  F VR+    K   +
Sbjct: 132 SFQENYARTCGEEIRRSF-------YIDISVEKRIGKFLVRMWRRTKTEWF 175


>gi|108742520|gb|ABG01896.1| S9 ribosomal protein [Gryllus firmus]
 gi|108742522|gb|ABG01897.1| S9 ribosomal protein [Gryllus bimaculatus]
 gi|108742524|gb|ABG01898.1| S9 ribosomal protein [Gryllus veletis]
 gi|108742526|gb|ABG01899.1| S9 ribosomal protein [Gryllus pennsylvanicus]
          Length = 184

 Score = 41.4 bits (96), Expect = 0.067,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 95  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 154

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 155 LDSQKHIDFSLKS 167


>gi|119580810|gb|EAW60406.1| hCG41114, isoform CRA_c [Homo sapiens]
          Length = 194

 Score = 41.4 bits (96), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH  V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 150


>gi|327239250|gb|AEA39492.1| ribosomal protein S9 [Ailuropoda melanoleuca]
 gi|327239342|gb|AEA39538.1| ribosomal protein S9 [Ailuropoda melanoleuca]
          Length = 194

 Score = 41.4 bits (96), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ +  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRIRKQV 141

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 142 VNIPSFIVRLDSQKHIDFSLRS 163


>gi|294337265|emb|CAQ52781.1| ribosomal protein S4 [Symphyodon imbricatifolius]
          Length = 46

 Score = 41.4 bits (96), Expect = 0.068,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 12/29 (41%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNT 29
          MS+    + +I RR+G       K+    
Sbjct: 1  MSRYRGPRVRIIRRLGTLPGLTNKTSQLK 29


>gi|188572472|gb|ACD65142.1| putative 40S ribosomal protein RPS9 [Phoronis muelleri]
          Length = 191

 Score = 41.4 bits (96), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        L  FLE RL T V++     +I  AR  +  RH+ V  + VNI SY  +
Sbjct: 90  KMKLDYVLGLRLEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSYVVR 149

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 150 LDSQKHIDFSLKS 162


>gi|44967688|gb|AAS49576.1| ribosomal protein S9 [Protopterus dolloi]
          Length = 174

 Score = 41.4 bits (96), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 80  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 139

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 140 LDSQKHIDFSLRS 152


>gi|49258824|pdb|1S1H|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
           Yeast Obtained By Docking Atomic Models For Rna And
           Protein Components Into A 11.7 A Cryo-Em Map. This File,
           1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
           In File 1s1i
          Length = 179

 Score = 41.4 bits (96), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VNI S+  +
Sbjct: 85  DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 131


>gi|215259451|gb|ACJ64217.1| ribosomal protein S4 [Culex tarsalis]
          Length = 140

 Score = 41.4 bits (96), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 3/103 (2%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
           L L  K + + + G+   ++      + +   +        +  FLE RL T V++    
Sbjct: 7   LTLEEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIDDFLERRLQTQVFKLGLA 66

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            +   AR  +  RH+ V  + VNI S+  +      +    K 
Sbjct: 67  KSYHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLKS 109


>gi|124300803|dbj|BAF45897.1| ribosomal protein S9 [Solea senegalensis]
          Length = 194

 Score = 41.4 bits (96), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIPHARVLIRQRHIRVRKQVVNIPSFVVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|71657652|ref|XP_817338.1| 40S ribosomal protein S9 [Trypanosoma cruzi strain CL Brener]
 gi|70882523|gb|EAN95487.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi]
          Length = 190

 Score = 41.4 bits (96), Expect = 0.069,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 51  QLRAKQKMKKY--YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPT 108
           QL     M++   YG + E        E D+     S  +   LE RL T+V++     +
Sbjct: 69  QLEGSAIMRRCHDYGFLEE--------EKDKLDYVLSLTVPDILERRLQTVVFKHGLAKS 120

Query: 109 IFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  AR  +  RH+ V  + V I S+  +      +
Sbjct: 121 VHHARVLILQRHIAVAKQIVTIPSFIVRVSSEHHI 155


>gi|218192116|gb|EEC74543.1| hypothetical protein OsI_10067 [Oryza sativa Indica Group]
          Length = 292

 Score = 41.4 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88
            R      +   R    +   L L  K   + + G   E   R + +    + G    + 
Sbjct: 138 KRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEG---EALLRRMNRYGLLADGQNKLDY 194

Query: 89  I------SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
           +      +FL  RL T+V++A    +I  AR  +  RH+ V  + VNI S+  +      
Sbjct: 195 VLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKH 254

Query: 143 V 143
           +
Sbjct: 255 I 255


>gi|322696803|gb|EFY88590.1| 40S ribosomal protein S9 [Metarhizium acridum CQMa 102]
          Length = 191

 Score = 41.4 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78
           G +G R K +    GL L   ++  +    + EK  + +F+                   
Sbjct: 30  GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 89

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +     +  L  FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 90  KLDYVLALKLEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147


>gi|145350813|ref|XP_001419792.1| Ribosomal protein S9, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
 gi|144580024|gb|ABO98085.1| Ribosomal protein S9, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
          Length = 194

 Score = 41.4 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
            A  +  + YG + E +        D+     +     FLE RL T+V++     ++  A
Sbjct: 76  EAIMRRMRNYGLLDETQ--------DKLDYVLALGPEQFLERRLQTLVFKLGLAKSVHHA 127

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           R  +  RH+ V  + VN+ S+  +      +
Sbjct: 128 RVLIRQRHIRVGKQIVNVPSFLVRTDSQKHI 158


>gi|320531524|ref|ZP_08032476.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp.
           oral taxon 171 str. F0337]
 gi|320136263|gb|EFW28259.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp.
           oral taxon 171 str. F0337]
          Length = 290

 Score = 41.4 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
            R+D+ + R     +   A   +   HV ++G+ V   + +      IE+   S
Sbjct: 5   IRIDSELVRRGLARSRTHAATLITDGHVTLDGQVVTKPARQVDPAQAIEILVPS 58


>gi|168003592|ref|XP_001754496.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694117|gb|EDQ80466.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 198

 Score = 41.4 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYALSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDESQCKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +  + +FLE RL T+V+++    +I  AR  +  RH+ V  + V++ S+  +
Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVR 151


>gi|121704904|ref|XP_001270715.1| 40S ribosomal protein S9 [Aspergillus clavatus NRRL 1]
 gi|119398861|gb|EAW09289.1| 40S ribosomal protein S9 [Aspergillus clavatus NRRL 1]
          Length = 193

 Score = 41.4 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 103 DFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQIVNVPSFMVR 149


>gi|49524072|emb|CAG47084.1| 40S ribosomal protein S9 [Catharanthus roseus]
          Length = 197

 Score = 41.4 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  RH+
Sbjct: 85  YGLLDEGQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGKQVVNVPSFMVRVDSQKHI 158


>gi|293342473|ref|XP_002725244.1| PREDICTED: ribosomal protein S9-like [Rattus norvegicus]
          Length = 190

 Score = 41.4 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 87  KMKLDFILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVLKQVVNIPSFIVR 146

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 147 LDSQKHIDFSLRS 159


>gi|225425738|ref|XP_002276284.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086394|emb|CBI31983.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score = 41.4 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  RH+
Sbjct: 85  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQVVNIPSFMVRVESQKHI 158


>gi|94502571|ref|YP_588274.1| ribosomal protein S4 [Zea mays subsp. mays]
 gi|114151588|ref|YP_740375.1| ribosomal protein S4 [Zea perennis]
 gi|114151655|ref|YP_740407.1| ribosomal protein S4 [Zea mays subsp. parviglumis]
 gi|40795010|gb|AAR91054.1| ribosomal protein S4 [Zea mays]
 gi|93116061|gb|ABE98694.1| ribosomal protein S4 [Zea mays subsp. mays]
 gi|93116105|gb|ABE98737.1| ribosomal protein S4 [Zea mays subsp. mays]
 gi|93116154|gb|ABE98785.1| ribosomal protein S4 [Zea mays subsp. mays]
 gi|102567922|gb|ABF70839.1| ribosomal protein S4 [Zea perennis]
 gi|102567988|gb|ABF70872.1| ribosomal protein S4 [Zea mays subsp. parviglumis]
 gi|102579654|gb|ABF70934.1| ribosomal protein S4 [Zea mays subsp. mays]
          Length = 358

 Score = 41.4 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++ +  +K+  YYGD+  ++     +             +   E+R D I  R +F  T+
Sbjct: 53  IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLRFSDTL 106

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V +N   V I  ++   GD+I  K+ 
Sbjct: 107 PQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143


>gi|198437698|ref|XP_002119409.1| PREDICTED: similar to ribosomal protein S9 isoform 2 [Ciona
           intestinalis]
 gi|198437700|ref|XP_002119360.1| PREDICTED: similar to ribosomal protein S9 isoform 1 [Ciona
           intestinalis]
 gi|198437704|ref|XP_002119507.1| PREDICTED: similar to ribosomal protein S9 isoform 3 [Ciona
           intestinalis]
          Length = 191

 Score = 41.4 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 3/103 (2%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
           L L  K   + + G+   ++      + +   +        +  FLE RL T V++    
Sbjct: 61  LTLDEKNTRRLFEGNALLRRLVRIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLA 120

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            +I  AR  +  RH+ V  + VNI S+  +      +    + 
Sbjct: 121 KSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163


>gi|322709543|gb|EFZ01119.1| 40S ribosomal protein S9 (S7) [Metarhizium anisopliae ARSEF 23]
          Length = 204

 Score = 41.4 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78
           G +G R K +    GL L   ++  +    + EK  + +F+                   
Sbjct: 43  GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 102

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +     +  L  FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 103 KLDYVLALKLEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 160


>gi|226474510|emb|CAX71741.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226474512|emb|CAX71742.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475654|emb|CAX77876.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475660|emb|CAX77879.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475662|emb|CAX77880.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475664|emb|CAX77881.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475666|emb|CAX77882.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475668|emb|CAX77883.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475670|emb|CAX77884.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475672|emb|CAX77885.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475674|emb|CAX77886.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475676|emb|CAX77887.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475678|emb|CAX77888.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475680|emb|CAX77889.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475682|emb|CAX77890.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475684|emb|CAX77891.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475686|emb|CAX77892.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
 gi|226475688|emb|CAX77893.1| putative 40S ribosomal protein S9 [Schistosoma japonicum]
          Length = 192

 Score = 41.4 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + ++  +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN   
Sbjct: 86  LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 145

Query: 133 YRCK 136
           +  +
Sbjct: 146 FMVR 149


>gi|227544869|ref|ZP_03974918.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A]
 gi|300909911|ref|ZP_07127371.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112]
 gi|227185143|gb|EEI65214.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A]
 gi|300892559|gb|EFK85919.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112]
          Length = 261

 Score = 41.4 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           + +    + +    RLD +V  A F  +   A+Q + H  V +N   ++   Y+    D+
Sbjct: 171 KEEWVPIVTTVSSLRLD-VVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDL 229

Query: 141 IEVKQKSKQLASVLEASQLAERD 163
           I V+   +    +       +++
Sbjct: 230 ISVRHGGRLRIDMTNGKTKKDKE 252


>gi|255965449|gb|ACU45029.1| ribosomal protein S9 [Pfiesteria piscicida]
          Length = 186

 Score = 41.4 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL + V++     +I  AR  +  RH+ V  + VN+ S+  +  
Sbjct: 88  KLDYVLGLKVNDFLERRLQSQVFKLGLAKSIHHARVLILQRHIRVGRQIVNVPSFLVRVD 147

Query: 139 DVIEV 143
               +
Sbjct: 148 SQKHI 152


>gi|114151620|ref|YP_740450.1| ribosomal protein S4 [Zea luxurians]
 gi|110287616|gb|ABG65662.1| ribosomal protein S4 [Zea luxurians]
          Length = 358

 Score = 41.4 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++ +  +K+  YYGD+  ++     +             +   E+R D I  R +F  T+
Sbjct: 53  IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLRFSDTL 106

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V +N   V I  ++   GD+I  K+ 
Sbjct: 107 PQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143


>gi|149210501|ref|XP_001522625.1| hypothetical protein MGCH7_ch7g725 [Magnaporthe oryzae 70-15]
 gi|86196680|gb|EAQ71318.1| hypothetical protein MGCH7_ch7g725 [Magnaporthe oryzae 70-15]
          Length = 180

 Score = 41.4 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 3/110 (2%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGD 83
            N R          +  + +   L L  K   + + G+   ++      + +   +    
Sbjct: 24  KNKREVWRVQLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYV 83

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            +  +  FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 84  LALKVEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 133


>gi|83595157|gb|ABC25036.1| ribosomal protein S9 [Hydra vulgaris]
          Length = 116

 Score = 41.4 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V +     +I  AR  +  +H+ V  + VNI S+  +
Sbjct: 14  RMKLDYVLGLKVEDFLERRLQTQVLKLGLAKSIHHARVLIRQKHIRVRKQLVNIPSFIVR 73


>gi|225713680|gb|ACO12686.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis]
 gi|290463001|gb|ADD24548.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis]
 gi|290562337|gb|ADD38565.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis]
          Length = 190

 Score = 41.4 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 21/153 (13%)

Query: 18  NLWGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
            ++  P+ P             G +G R K +       L   +K  +    + EK  R 
Sbjct: 12  KVFATPRRPFEKTRLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAARDLLTLEEKDPRR 71

Query: 73  IFKEAD----------------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           +F+                   +        +  FLE RL T V++     +I  AR  +
Sbjct: 72  LFEGNALLRRLVRVGVLDESHMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLI 131

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             RH+ V  + VN+ S+  +      +    K 
Sbjct: 132 RQRHIRVRKQVVNVPSFVVRLDSQKHIDFSLKS 164


>gi|156056563|ref|XP_001594205.1| 40S ribosomal protein S9 [Sclerotinia sclerotiorum 1980]
 gi|154701798|gb|EDO01537.1| 40S ribosomal protein S9 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 191

 Score = 41.4 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDT 84
           N R          +  + +   L L  K   + + G+   ++      + +   +     
Sbjct: 36  NKREVWRVQLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDEARMKLDYVL 95

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
           +  +  F+E RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 96  ALKIEDFMERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|27665858|ref|XP_213106.1| PREDICTED: ribosomal protein S9-like [Rattus norvegicus]
 gi|109512423|ref|XP_001056883.1| PREDICTED: ribosomal protein S9-like [Rattus norvegicus]
          Length = 194

 Score = 41.4 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++ +   +I  A   +  RH+ V  + 
Sbjct: 82  VRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCK 136
           VNI S+   
Sbjct: 142 VNIPSFIVC 150


>gi|195127033|ref|XP_002007973.1| GI12083 [Drosophila mojavensis]
 gi|193919582|gb|EDW18449.1| GI12083 [Drosophila mojavensis]
          Length = 195

 Score = 41.4 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLEEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|115278626|ref|YP_762497.1| ribosomal protein S4 [Tripsacum dactyloides]
 gi|114432117|gb|ABI74666.1| ribosomal protein S4 [Tripsacum dactyloides]
          Length = 356

 Score = 41.4 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++ +  +K+  YYGD+  ++     +             +   E+R D I  R +F  T+
Sbjct: 53  IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLRFSDTL 106

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V +N   V I  ++   GD+I  K+ 
Sbjct: 107 PQARQPISHRRVCLNNGLVTITHFKVSHGDLISFKEN 143


>gi|192913000|gb|ACF06608.1| ribosomal protein [Elaeis guineensis]
          Length = 197

 Score = 41.4 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  RH+
Sbjct: 85  YGLLDENQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQVVNIPSFLVRVDSAKHI 158


>gi|85112053|ref|XP_964233.1| 40S ribosomal protein S9 [Neurospora crassa OR74A]
 gi|28926006|gb|EAA34997.1| 40S ribosomal protein S9 [Neurospora crassa OR74A]
 gi|88866507|gb|ABD57302.1| unknown [Neurospora crassa]
          Length = 190

 Score = 41.4 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|289616625|emb|CBI56575.1| unnamed protein product [Sordaria macrospora]
          Length = 190

 Score = 41.1 bits (95), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|146403788|gb|ABQ32300.1| putative 40S ribosomal protein S9 [Artemisia annua]
          Length = 197

 Score = 41.1 bits (95), Expect = 0.084,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++     +I  AR  +  RH+
Sbjct: 85  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIKQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGRQVVNVPSFMVRVDSQKHI 158


>gi|148543830|ref|YP_001271200.1| RNA-binding S4 domain-containing protein [Lactobacillus reuteri DSM
           20016]
 gi|184153231|ref|YP_001841572.1| hypothetical protein LAR_0576 [Lactobacillus reuteri JCM 1112]
 gi|227364734|ref|ZP_03848783.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3]
 gi|325682639|ref|ZP_08162156.1| S4 domain protein [Lactobacillus reuteri MM4-1A]
 gi|148530864|gb|ABQ82863.1| RNA-binding S4 domain protein [Lactobacillus reuteri DSM 20016]
 gi|183224575|dbj|BAG25092.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|227070193|gb|EEI08567.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3]
 gi|324978478|gb|EGC15428.1| S4 domain protein [Lactobacillus reuteri MM4-1A]
          Length = 261

 Score = 41.1 bits (95), Expect = 0.084,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
           + +    + +    RLD +V  A F  +   A+Q + H  V +N   ++   Y+    D+
Sbjct: 171 KEEWVPIVTTVSSLRLD-VVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDL 229

Query: 141 IEVKQKSKQLASVLEASQLAERD 163
           I V+   +    +       +++
Sbjct: 230 ISVRHGGRLRIDMTNGKTKKDKE 252


>gi|194462968|gb|ACF72878.1| ribosomal protein S9 [Ochlerotatus taeniorhynchus]
          Length = 195

 Score = 41.1 bits (95), Expect = 0.084,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78
           G +G R K +       L   +K  +    + EK            R + +         
Sbjct: 34  GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +   AR  +  RH+ V  + VNI S+  +  
Sbjct: 94  KLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFVVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|6325176|ref|NP_015244.1| Rps9ap [Saccharomyces cerevisiae S288c]
 gi|6094198|sp|O13516|RS9A_YEAST RecName: Full=40S ribosomal protein S9-A; AltName: Full=RP21;
           AltName: Full=S13; AltName: Full=YP28; AltName:
           Full=YS11
 gi|313103667|pdb|3IZB|C Chain C, Localization Of The Small Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
 gi|315113452|pdb|3O2Z|E Chain E, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
           Of The First 80s In The Asymmetric Unit.
 gi|315113480|pdb|3O30|E Chain E, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
           Of The Second 80s In The Asymmetric Unit.
 gi|218515|dbj|BAA00626.1| YS11 [Saccharomyces cerevisiae]
 gi|2347168|gb|AAB68268.1| Ypl081wp [Saccharomyces cerevisiae]
 gi|151942716|gb|EDN61062.1| ribosomal protein S9A [Saccharomyces cerevisiae YJM789]
 gi|259150077|emb|CAY86880.1| Rps9ap [Saccharomyces cerevisiae EC1118]
 gi|285815460|tpg|DAA11352.1| TPA: Rps9ap [Saccharomyces cerevisiae S288c]
          Length = 197

 Score = 41.1 bits (95), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VNI S+  +
Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149


>gi|71414539|ref|XP_809368.1| 40S ribosomal protein S9 [Trypanosoma cruzi strain CL Brener]
 gi|71659082|ref|XP_821266.1| 40S ribosomal protein S9 [Trypanosoma cruzi strain CL Brener]
 gi|70873739|gb|EAN87517.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi]
 gi|70886640|gb|EAN99415.1| 40S ribosomal protein S9, putative [Trypanosoma cruzi]
          Length = 190

 Score = 41.1 bits (95), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 16/136 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS----------- 72
           K  ++      G +G R K +     + L   ++  +    + E   R            
Sbjct: 20  KERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRQLEGSAIMRRC 79

Query: 73  -----IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                + +E D+     S  +   LE RL T+V++     ++  AR  +  RH+ V  + 
Sbjct: 80  HDYGFLEEEKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHARVLILQRHIAVAKQI 139

Query: 128 VNIGSYRCKEGDVIEV 143
           V I S+  +      +
Sbjct: 140 VTIPSFIVRVSSEHHI 155


>gi|44967635|gb|AAS49575.1| ribosomal protein S9 [Latimeria chalumnae]
          Length = 166

 Score = 41.1 bits (95), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 75  KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 134

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 135 LDSQKHIYFSLRS 147


>gi|1710780|sp|P52810|RS9_PODAN RecName: Full=40S ribosomal protein S9; AltName: Full=S7
 gi|1321917|emb|CAA65433.1| cytoplasmic ribosomal protein S7 [Podospora anserina]
          Length = 190

 Score = 41.1 bits (95), Expect = 0.086,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T+VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|320580778|gb|EFW95000.1| 40S ribosomal protein S9-B [Pichia angusta DL-1]
          Length = 365

 Score = 41.1 bits (95), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G + E K +  +  + +           FLE RL T V++     +I  AR  +  RH+ 
Sbjct: 84  GILPEDKMKLDYVLSLKIED--------FLERRLQTQVFKLGLAKSIHHARVLITQRHIA 135

Query: 123 VNGRSVNIGSYRCK 136
           V  + V I S+  +
Sbjct: 136 VGKQIVTIPSFMVR 149


>gi|39970971|ref|XP_366876.1| hypothetical protein MGG_02952 [Magnaporthe oryzae 70-15]
 gi|145017216|gb|EDK01579.1| hypothetical protein MGG_02952 [Magnaporthe oryzae 70-15]
          Length = 191

 Score = 41.1 bits (95), Expect = 0.089,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 3/110 (2%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGD 83
            N R          +  + +   L L  K   + + G+   ++      + +   +    
Sbjct: 35  KNKREVWRVQLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYV 94

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            +  +  FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 95  LALKVEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|50555257|ref|XP_505037.1| YALI0F05544p [Yarrowia lipolytica]
 gi|49650907|emb|CAG77844.1| YALI0F05544p [Yarrowia lipolytica]
          Length = 192

 Score = 41.1 bits (95), Expect = 0.089,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78
           G  G + K +    GLQL   ++  +      EK  + +F+                +  
Sbjct: 32  GEFGLKNKREIYRIGLQLSKIRRAARELLTRDEKDPKRLFEGNALIRRLVRLGVLPEDRM 91

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +     + +   FLE RL T V++     +I  AR  ++ RH+ V  + VN+ S+  +
Sbjct: 92  KLDYVLALSPEDFLERRLQTQVFKLGLAKSIHHARVLISQRHIRVGKQIVNVPSFMVR 149


>gi|281500810|pdb|3JYV|D Chain D, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
           EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
           Lanuginosus Ribosome At 8.9a Resolution
          Length = 158

 Score = 41.1 bits (95), Expect = 0.089,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VNI S+  +
Sbjct: 98  DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 144


>gi|224071319|ref|XP_002303402.1| predicted protein [Populus trichocarpa]
 gi|222840834|gb|EEE78381.1| predicted protein [Populus trichocarpa]
          Length = 197

 Score = 41.1 bits (95), Expect = 0.089,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++A    +I  AR  +  RH 
Sbjct: 85  YGLLEENQ--------NKLDYVLALTVENFLERRLQTLVFKAGMAKSIHHARVLIKQRHT 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQVVNIPSFMVRVDSQKHI 158


>gi|238882168|gb|EEQ45806.1| 40S ribosomal protein S9-B [Candida albicans WO-1]
          Length = 189

 Score = 41.1 bits (95), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 8/87 (9%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G +SE K +  +  A +           FLE RL T V++     +I  AR  +  RH+ 
Sbjct: 84  GVLSEDKMKLDYVLALKPED--------FLERRLQTQVFKLGLARSIHHARVLITQRHIA 135

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           V  + VNI S+  +      +      
Sbjct: 136 VGKQIVNIPSFTVRLDSQKHIDFAHNS 162


>gi|241951212|ref|XP_002418328.1| 40s ribosomal protein S9-B, putative [Candida dubliniensis CD36]
 gi|223641667|emb|CAX43628.1| 40s ribosomal protein S9-B, putative [Candida dubliniensis CD36]
          Length = 190

 Score = 41.1 bits (95), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 8/87 (9%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G +SE K +  +  A +           FLE RL T V++     +I  AR  +  RH+ 
Sbjct: 84  GVLSEDKMKLDYVLALKPED--------FLERRLQTQVFKLGLARSIHHARVLITQRHIA 135

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           V  + VNI S+  +      +      
Sbjct: 136 VGKQIVNIPSFTVRLDSQKHIDFAHNS 162


>gi|15606155|ref|NP_213532.1| hemolysin [Aquifex aeolicus VF5]
 gi|2983347|gb|AAC06935.1| hemolysin [Aquifex aeolicus VF5]
          Length = 258

 Score = 41.1 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  +     VP+   A+  +    VLVNG+ V+   YR K  + +EVK+  K ++  
Sbjct: 1   MRLDKYLTDKGIVPSREKAQAVIMAGQVLVNGKVVDKPGYRLKGNEKVEVKELPKYVSRG 60

Query: 154 LEASQLA 160
            E  + A
Sbjct: 61  GEKLEWA 67


>gi|297616625|ref|YP_003701784.1| hemolysin A [Syntrophothermus lipocalidus DSM 12680]
 gi|297144462|gb|ADI01219.1| hemolysin A [Syntrophothermus lipocalidus DSM 12680]
          Length = 270

 Score = 41.1 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           +SRLDT+V+     PT   AR  +    V+VNG  V+    +      +
Sbjct: 3   KSRLDTLVHDRGLAPTREKARALILAGKVVVNGNRVDKPGTKVPVDANV 51


>gi|55982011|gb|AAV69398.1| 40S ribosomal protein S9 [Aedes aegypti]
          Length = 195

 Score = 41.1 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78
           G +G R K +       L   +K  +    + EK            R + +         
Sbjct: 34  GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE  L T V++     +   AR  +  RH+ V  + VNI S+  +  
Sbjct: 94  KLDYVLGLKIEDFLERCLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|50294438|ref|XP_449630.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528944|emb|CAG62606.1| unnamed protein product [Candida glabrata]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VNI S+  +
Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149


>gi|50289209|ref|XP_447035.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526344|emb|CAG59968.1| unnamed protein product [Candida glabrata]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VNI S+  +
Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149


>gi|284073118|gb|ADB77798.1| 40S ribosomal protein S9 [Cladophora coelothrix]
          Length = 179

 Score = 41.1 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%)

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           ++ ++     +     FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+ 
Sbjct: 91  EKQNKLDYILALTPADFLERRLQTQVFKLGLAKSIHHARVIIRQRHIRVGKQIVNVPSFM 150

Query: 135 CKEGDV 140
            +    
Sbjct: 151 VRMESQ 156


>gi|119580809|gb|EAW60405.1| hCG41114, isoform CRA_b [Homo sapiens]
          Length = 103

 Score = 41.1 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +        +  FLE RL T V++     +I  AR  +  RH  V  + VNI S+  +
Sbjct: 2   KLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 59


>gi|323450976|gb|EGB06855.1| hypothetical protein AURANDRAFT_28757 [Aureococcus anophagefferens]
          Length = 196

 Score = 41.1 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
                 LE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 101 MTTQRLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFLVR 151


>gi|57143|emb|CAA47013.1| ribosomal protein S9 [Rattus norvegicus]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 16/129 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVLKQV 141

Query: 128 VNIGSYRCK 136
           VNI S+  +
Sbjct: 142 VNIPSFIVR 150


>gi|308322141|gb|ADO28208.1| 40S ribosomal protein s9 [Ictalurus furcatus]
 gi|308324465|gb|ADO29367.1| 40S ribosomal protein s9 [Ictalurus punctatus]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.100,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 142 VNIPSFVVRLDSQKHIDFSLRS 163


>gi|154291725|ref|XP_001546443.1| 40S ribosomal protein S9 [Botryotinia fuckeliana B05.10]
 gi|150846653|gb|EDN21846.1| 40S ribosomal protein S9 [Botryotinia fuckeliana B05.10]
          Length = 191

 Score = 41.1 bits (95), Expect = 0.100,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            F+E RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFMERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|317574793|ref|NP_001187074.1| 40S ribosomal protein S9 [Ictalurus punctatus]
 gi|15294029|gb|AAK95191.1|AF402817_1 40S ribosomal protein S9 [Ictalurus punctatus]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.100,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 141

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    + 
Sbjct: 142 VNIPSFVVRLDSQKHIDFSLRS 163


>gi|326773128|ref|ZP_08232411.1| cytotoxin/hemolysin [Actinomyces viscosus C505]
 gi|326636358|gb|EGE37261.1| cytotoxin/hemolysin [Actinomyces viscosus C505]
          Length = 290

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
            R+D+ + R     +   A   +   HV ++G  V   + +      IE+   S
Sbjct: 5   IRIDSELVRRGLARSRTHAATLIADGHVTLDGEVVTKPARQVNPAQAIEILVPS 58


>gi|225708802|gb|ACO10247.1| 40S ribosomal protein S9 [Caligus rogercresseyi]
          Length = 190

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 23  KTRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +    K 
Sbjct: 143 VNVPSFVVRLDSQKHIDFSLKS 164


>gi|57231025|gb|AAW47273.1| ribosomal protein S4 [Liriodendron tulipifera]
          Length = 320

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             +     ++ +  +K+  ++GD+   +     +                 E+R D I  
Sbjct: 38  PRENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPV 91

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           R  F  TI  ARQ ++HR V VN   V+I   +   GD+I  ++ 
Sbjct: 92  RLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLISFQEN 136


>gi|195623226|gb|ACG33443.1| 40S ribosomal protein S9 [Zea mays]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E + +  +  A      T+ N ++    RL T+V++A    +I  AR  +  RH+
Sbjct: 85  YGLLAEGQNKLDYVLAL-----TAENFLA---RRLQTLVFKAGMAKSIHHARVLIKQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGRQIVNVPSFMVRVESEKHI 158


>gi|229367454|gb|ACQ58707.1| 40S ribosomal protein S9 [Anoplopoma fimbria]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|160550153|gb|ABX44781.1| putative 40S ribosomal protein RPS9 [Flustra foliacea]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI SY  +
Sbjct: 90  KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNIPSYVVR 149

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 150 LDSQKHIDFSLKS 162


>gi|255715507|ref|XP_002554035.1| KLTH0E12826p [Lachancea thermotolerans]
 gi|238935417|emb|CAR23598.1| KLTH0E12826p [Lachancea thermotolerans]
          Length = 193

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 21/138 (15%)

Query: 20  WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +  PK P  +          G +G + K +      QL   ++  +      EK  R +F
Sbjct: 12  YSTPKRPYESARLDAELKLAGEYGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPRRLF 71

Query: 75  K----------------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +                +  +     +  +  FLE RL T VY+     ++  AR  +  
Sbjct: 72  EGNAMIRRLVRLGVLSEDKKKLDHVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQ 131

Query: 119 RHVLVNGRSVNIGSYRCK 136
           RH+ V  + VN+ S+  +
Sbjct: 132 RHIAVGKQLVNVPSFLVR 149


>gi|297811659|ref|XP_002873713.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata]
 gi|297319550|gb|EFH49972.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score = 41.1 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +  ++     
Sbjct: 40  NKRELWRVQYSLSRIRNAARDLLTLDEKSPKRIFEGEALLRRMNRYGLLDESQNKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +  + +FLE RL TIV+++    +I  +R  +  RH+ V  + VNI S+  +
Sbjct: 100 ALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQLVNIPSFMVR 151


>gi|189342214|gb|ACD91686.1| ribosomal protein S4 [Cousinia autrani]
          Length = 45

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  R +G       K P      G  L  Q R  K S + 
Sbjct: 1  MSRYRGPRFKKIRHLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYR 45


>gi|195377017|ref|XP_002047289.1| GJ13353 [Drosophila virilis]
 gi|194154447|gb|EDW69631.1| GJ13353 [Drosophila virilis]
          Length = 195

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|195015334|ref|XP_001984182.1| GH15146 [Drosophila grimshawi]
 gi|193897664|gb|EDV96530.1| GH15146 [Drosophila grimshawi]
          Length = 195

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|89280731|ref|YP_514660.1| ribosomal protein S4 [Oryza sativa Indica Group]
 gi|289065037|ref|YP_003433848.1| ribosomal protein small subunit 4 [Oryza rufipogon]
 gi|3025870|gb|AAC26506.1| ribosomal protein S4 [Oryza sativa]
 gi|74100098|gb|AAZ99262.1| ribosomal protein S4 [Oryza sativa Indica Group]
 gi|74100153|gb|AAZ99316.1| ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|74100207|gb|AAZ99369.1| ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|285026119|dbj|BAI67952.1| ribosomal protein small subunit 4 [Oryza rufipogon]
 gi|285026169|dbj|BAI68001.1| ribosomal protein small subunit 4 [Oryza sativa Indica Group]
          Length = 352

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++ +  +K+  YYGD+  ++     +             +   E+R D I  R  F  T+
Sbjct: 53  IKSQTTRKLSLYYGDLPIREMHRGRERTSYIP------FLLNQETRSDVIPVRLHFCDTL 106

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V +N   V I   +   GD+I  ++ 
Sbjct: 107 PQARQPISHRRVCLNNGLVTITHLKVSHGDLISFQEN 143


>gi|24661707|ref|NP_524004.2| ribosomal protein S9, isoform A [Drosophila melanogaster]
 gi|24661711|ref|NP_729506.1| ribosomal protein S9, isoform D [Drosophila melanogaster]
 gi|194867971|ref|XP_001972186.1| GG14025 [Drosophila erecta]
 gi|195326350|ref|XP_002029892.1| GM24860 [Drosophila sechellia]
 gi|195490797|ref|XP_002093291.1| RpS9 [Drosophila yakuba]
 gi|195589072|ref|XP_002084280.1| GD12912 [Drosophila simulans]
 gi|60416385|sp|P55935|RS9_DROME RecName: Full=40S ribosomal protein S9
 gi|7294919|gb|AAF50249.1| ribosomal protein S9, isoform A [Drosophila melanogaster]
 gi|23093773|gb|AAN11946.1| ribosomal protein S9, isoform D [Drosophila melanogaster]
 gi|190653969|gb|EDV51212.1| GG14025 [Drosophila erecta]
 gi|194118835|gb|EDW40878.1| GM24860 [Drosophila sechellia]
 gi|194179392|gb|EDW93003.1| RpS9 [Drosophila yakuba]
 gi|194196289|gb|EDX09865.1| GD12912 [Drosophila simulans]
 gi|254750749|gb|ACT80127.1| LD13662p [Drosophila melanogaster]
          Length = 195

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI S+  +      +    K 
Sbjct: 143 VNIPSFVVRLDSQKHIDFSLKS 164


>gi|290989208|ref|XP_002677233.1| predicted protein [Naegleria gruberi]
 gi|284090839|gb|EFC44489.1| predicted protein [Naegleria gruberi]
          Length = 184

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
           K  ++      G +G + K +       L   +K  ++   + E   +  F+ A   R  
Sbjct: 23  KERLDRELRMCGKYGLKNKHEIWRVQYYLARARKTARHLLTLPEDDIKRQFEGAALLRRM 82

Query: 84  TSHNLIS----------------FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           T   L+                  LE RL TIV +     +I  ARQ +   H+ V  ++
Sbjct: 83  TRLGLLDESRQQLDYILSLKAEDLLERRLQTIVQKLNLSKSIHHARQLIFQGHIRVGKQT 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      + +    
Sbjct: 143 VNVPSFTVRVDSEKHINKSPFS 164


>gi|209732856|gb|ACI67297.1| 40S ribosomal protein S9 [Salmo salar]
 gi|209734374|gb|ACI68056.1| 40S ribosomal protein S9 [Salmo salar]
 gi|223646122|gb|ACN09819.1| 40S ribosomal protein S9 [Salmo salar]
 gi|223671969|gb|ACN12166.1| 40S ribosomal protein S9 [Salmo salar]
 gi|225715988|gb|ACO13840.1| 40S ribosomal protein S9 [Esox lucius]
          Length = 194

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|57231029|gb|AAW47275.1| ribosomal protein S4 [Piper betle]
          Length = 326

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 13/136 (9%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++ +  +K+  +YGD+   +     +                 E+R D I  R  F  T+
Sbjct: 46  IKSQTTRKLPLFYGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPVRLHFRETL 99

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS 169
             ARQ ++HR V VN   V+I   +   GD+I  ++   +                 YI 
Sbjct: 100 PQARQPISHRRVCVNNGMVSITHLKVSHGDLISFQENEARTGGEEIRRSF-------YID 152

Query: 170 VNHDNMVATFVRIPSS 185
           ++ +N++  F+  P  
Sbjct: 153 ISIENIIGKFLDHPVR 168


>gi|15242498|ref|NP_198801.1| 40S ribosomal protein S9 (RPS9C) [Arabidopsis thaliana]
 gi|75309179|sp|Q9FLF0|RS92_ARATH RecName: Full=40S ribosomal protein S9-2
 gi|10176977|dbj|BAB10209.1| 40S ribosomal protein S9 [Arabidopsis thaliana]
 gi|21593688|gb|AAM65655.1| 40S ribosomal protein S9-like [Arabidopsis thaliana]
 gi|90568002|gb|ABD94071.1| At5g39850 [Arabidopsis thaliana]
 gi|332007100|gb|AED94483.1| 40S ribosomal protein S9-2 [Arabidopsis thaliana]
          Length = 197

 Score = 41.1 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL TIV+++    +I  AR  +  RH+
Sbjct: 85  YGLLDETQ--------NKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      V
Sbjct: 137 RVGRQLVNIPSFMVRVESQKHV 158


>gi|297805734|ref|XP_002870751.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata]
 gi|297316587|gb|EFH47010.1| 40S ribosomal protein S9 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL TIV+++    +I  AR  +  RH+
Sbjct: 85  YGLLDESQ--------NKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      V
Sbjct: 137 RVGRQLVNIPSFMVRVESQKHV 158


>gi|54610887|gb|AAV35367.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           latiusculum]
 gi|54610889|gb|AAV35368.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           wightianum]
 gi|54610891|gb|AAV35369.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|54610893|gb|AAV35370.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           aquilinum]
 gi|54610901|gb|AAV35374.1| ribosomal protein small subunit 4 [Pteridium aquilinum subsp.
           centrali-africanum]
 gi|54610905|gb|AAV35376.1| ribosomal protein small subunit 4 [Pteridium arachnoideum]
          Length = 31

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 3/31 (9%)

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
                RI          + +   LVVE+YSR
Sbjct: 2   TGLVNRI---ASRESVNLNINELLVVEYYSR 29


>gi|20271156|gb|AAM18533.1|AF375592_1 ribosomal protein S4 [Magnolia x soulangeana]
          Length = 352

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             +     ++ +  +K+  ++GD+   +     +                 E+R D I  
Sbjct: 45  PRENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIP------FPLNPETRSDVIPV 98

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           R  F  TI  ARQ ++HR V VN   V+I   +   GD+I  ++ 
Sbjct: 99  RLHFRETIPQARQPISHRRVCVNNGMVSITHLKVSHGDLISFQEN 143


>gi|219117986|ref|XP_002179777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408830|gb|EEC48763.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 167

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 24/49 (48%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
               LE RL T VY+     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 93  TQKLLERRLQTKVYKQGLAKSIHHARVLIRQRHIRVGSQLVNVPSFNVR 141


>gi|151946577|gb|EDN64799.1| ribosomal protein S9B [Saccharomyces cerevisiae YJM789]
 gi|190408660|gb|EDV11925.1| ribosomal protein S9B [Saccharomyces cerevisiae RM11-1a]
 gi|290878203|emb|CBK39262.1| Rps9bp [Saccharomyces cerevisiae EC1118]
          Length = 195

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VNI S+  +
Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149


>gi|256090381|ref|XP_002581172.1| 40S ribosomal protein S9 [Schistosoma mansoni]
 gi|238667016|emb|CAZ37411.1| 40S ribosomal protein S9, putative [Schistosoma mansoni]
          Length = 192

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 73  IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           + ++  +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN   
Sbjct: 86  LPEDRMKLDFVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLIRQRHIRVRKQMVNCPG 145

Query: 133 YRCK 136
           +  +
Sbjct: 146 FLVR 149


>gi|46129441|ref|XP_389072.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Gibberella zeae PH-1]
          Length = 191

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78
           G +G R K +    GL L   ++  +    + EK  + +F+                   
Sbjct: 30  GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 89

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +     +  +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 90  KLDYVLALKIEDFLERRLQTCVWKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147


>gi|198285475|gb|ACH85276.1| ribosomal protein S9 [Salmo salar]
          Length = 191

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 88  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 147

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 148 LDSQKHIDFSLRS 160


>gi|160331211|ref|XP_001712313.1| rps9 [Hemiselmis andersenii]
 gi|159765760|gb|ABW97988.1| rps9 [Hemiselmis andersenii]
          Length = 181

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 42  KSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVY 101
             K     +Q ++  K  + YG + E +        +      S  +  FLE RL TIV+
Sbjct: 63  PEKDPRRLIQGKSLIKRLRKYGILEENQ--------ETLDHILSLKIQDFLERRLQTIVF 114

Query: 102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           + K   +I  +R  +  RH+ V+ R V++ S+  +     +++  SK 
Sbjct: 115 KKKLAESIHHSRVLIKQRHISVDKRLVDVPSFLVRLKSQDKIEYFSKS 162


>gi|149248702|ref|XP_001528738.1| 40S ribosomal protein S9-B [Lodderomyces elongisporus NRRL YB-4239]
 gi|146448692|gb|EDK43080.1| 40S ribosomal protein S9-B [Lodderomyces elongisporus NRRL YB-4239]
          Length = 188

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G +SE K +  +  A R           FLE RL T V++     +I  AR  ++ RH+ 
Sbjct: 84  GVLSEDKMKLDYVLALRIED--------FLERRLQTQVFKLGLARSIHHARVLISQRHIA 135

Query: 123 VNGRSVNIGSYRCK 136
           V  + VN+ S+  +
Sbjct: 136 VGRQIVNVPSFTVR 149


>gi|6319666|ref|NP_009748.1| Rps9bp [Saccharomyces cerevisiae S288c]
 gi|585935|sp|P05755|RS9B_YEAST RecName: Full=40S ribosomal protein S9-B; AltName: Full=RP21;
           AltName: Full=S13; AltName: Full=YP28; AltName:
           Full=YS11
 gi|172795|gb|AAB59327.1| ribosomal protein S13 [Saccharomyces cerevisiae]
 gi|536552|emb|CAA85151.1| SUP46 [Saccharomyces cerevisiae]
 gi|575916|gb|AAB60283.1| ribosomal protein S13 [Saccharomyces cerevisiae]
 gi|285810519|tpg|DAA07304.1| TPA: Rps9bp [Saccharomyces cerevisiae S288c]
          Length = 195

 Score = 40.7 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VNI S+  +
Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVR 149


>gi|226531716|ref|NP_001149240.1| 40S ribosomal protein S9 [Zea mays]
 gi|195622330|gb|ACG32995.1| 40S ribosomal protein S9 [Zea mays]
 gi|195625718|gb|ACG34689.1| 40S ribosomal protein S9 [Zea mays]
 gi|219885117|gb|ACL52933.1| unknown [Zea mays]
          Length = 194

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E + +  +  A      T+ N ++    RL T+V++A    +I  AR  +  RH+
Sbjct: 85  YGLLAEGQNKLDYVLAL-----TAENFLA---RRLQTLVFKAGMAKSIHHARVLIKQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGRQIVNVPSFMVRVESEKHI 158


>gi|119580811|gb|EAW60407.1| hCG41114, isoform CRA_d [Homo sapiens]
          Length = 145

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           T   +  FLE RL T V++     +I  AR  +  RH  V  + VNI S+  +
Sbjct: 49  TLAKIQDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 101


>gi|326500076|dbj|BAJ90873.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326515032|dbj|BAJ99877.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 195

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG +SE +        ++     +  + +FL+ RL TIV++     +I  AR  +  RH+
Sbjct: 85  YGLLSEDQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      V
Sbjct: 137 RVGKQLVNIPSFMVRVDTEKHV 158


>gi|50310015|ref|XP_455021.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644156|emb|CAH00108.1| KLLA0E23673p [Kluyveromyces lactis]
          Length = 188

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  ++ RH+ V  + VNI S+  +
Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLISQRHIAVGKQIVNIPSFMVR 149


>gi|302919108|ref|XP_003052792.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733732|gb|EEU47079.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 191

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK----------------EAD 78
           G +G R K +    GL L   ++  +    + EK  + +F+                   
Sbjct: 30  GEYGLRNKREVWRVGLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRM 89

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +     +  +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 90  KLDYVLALKIEDFLERRLQTCVWKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVR 147


>gi|168019716|ref|XP_001762390.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686468|gb|EDQ72857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 198

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +   +     
Sbjct: 40  NKRELWRVQYVLSRIRNNARMLLTLDEKNTRRIFEGEALLRRMNRYGLLDESQCKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +  + +FLE RL T+V+++    +I  AR  +  RH+ V  + V++ S+  +
Sbjct: 100 ALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGKQIVDVPSFMVR 151


>gi|42415539|ref|NP_957146.1| ribosomal protein S9 [Danio rerio]
 gi|37748740|gb|AAH59492.1| Ribosomal protein S9 [Danio rerio]
 gi|38571718|gb|AAH62833.1| Ribosomal protein S9 [Danio rerio]
          Length = 194

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|264667325|gb|ACY71248.1| ribosomal protein S9 [Chrysomela tremulae]
          Length = 194

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T+V+++    +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 92  RMKLDYVLGLKIEDFLERRLQTLVFQSGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 151

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 152 LDSSKHIDFSLKS 164


>gi|15242241|ref|NP_197024.1| 40S ribosomal protein S9 (RPS9B) [Arabidopsis thaliana]
 gi|75311670|sp|Q9LXG1|RS91_ARATH RecName: Full=40S ribosomal protein S9-1
 gi|7671489|emb|CAB89330.1| 40S ribosomal protein-like [Arabidopsis thaliana]
 gi|38566648|gb|AAR24214.1| At5g15200 [Arabidopsis thaliana]
 gi|40824134|gb|AAR92351.1| At5g15200 [Arabidopsis thaliana]
 gi|110736816|dbj|BAF00367.1| 40S ribosomal protein - like [Arabidopsis thaliana]
 gi|332004745|gb|AED92128.1| 40S ribosomal protein S9-1 [Arabidopsis thaliana]
          Length = 198

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDT 84
           N R      +   R    +   L L  K   + + G+   ++        +  ++     
Sbjct: 40  NKRELWRVQYSLSRIRNAARDLLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVL 99

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +  + +FLE RL TIV+++    +I  +R  +  RH+ V  + VNI S+  +
Sbjct: 100 ALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQLVNIPSFMVR 151


>gi|170037445|ref|XP_001846568.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167880676|gb|EDS44059.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 195

 Score = 40.7 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78
           G +G R K +       L   +K  +    + EK            R + +         
Sbjct: 34  GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +   AR  +  RH+ V  + VNI S+  +  
Sbjct: 94  KLDYVLGLKIDDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|227541993|ref|ZP_03972042.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182208|gb|EEI63180.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 270

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
            RLD  + R K   +   ARQ +   HV V G   +  +
Sbjct: 5   RRLDAELVRRKIARSREQARQLITDGHVFVGGFKASKPA 43


>gi|227489011|ref|ZP_03919327.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091087|gb|EEI26399.1| possible hemolysin A [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 270

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
            RLD  + R K   +   ARQ +   HV V G   +  +
Sbjct: 5   RRLDAELVRRKIARSREQARQLITDGHVFVGGFKASKPA 43


>gi|312372913|gb|EFR20767.1| hypothetical protein AND_19485 [Anopheles darlingi]
          Length = 203

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +   AR  +  RH+ V  + VNI S+  +
Sbjct: 99  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNIPSFIVR 158

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 159 LDSQKHIDFSLKS 171


>gi|329946512|ref|ZP_08294028.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp.
           oral taxon 170 str. F0386]
 gi|328527143|gb|EGF54148.1| ribosomal RNA large subunit methyltransferase J [Actinomyces sp.
           oral taxon 170 str. F0386]
          Length = 290

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            R+D+ + R     +   A   +   HV ++G  V   + +      IE+
Sbjct: 5   IRIDSELVRRGLARSRTHAATLITDGHVTLDGVVVTKPARQVNPAQAIEI 54


>gi|325069012|ref|ZP_08127685.1| hemolysin A [Actinomyces oris K20]
          Length = 86

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
            R+D+ + R     +   A   +   HV ++G  V   + +      IE+   S
Sbjct: 5   IRIDSELVRRGLARSRTHAATLIADGHVTLDGEVVTKPARQVNPAQAIEILVPS 58


>gi|158187832|gb|ABW23205.1| ribosomal protein rps9 [Eurythoe complanata]
          Length = 180

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           K  ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 9   KERLDQELKLIGEYGLRNKREVWRVKYTLANIRKAARELLTLDEKDPRRLFEGNALLRRL 68

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        L  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 69  VRIGVLDEGKMKLDYVLGLRLDDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 128

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VNI SY  +      +    + 
Sbjct: 129 VNIPSYVVRLDSQKHIDFSLRS 150


>gi|225452773|ref|XP_002283256.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|225456733|ref|XP_002275166.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296082890|emb|CBI22191.3| unnamed protein product [Vitis vinifera]
 gi|297733997|emb|CBI15244.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V+++    +I  AR  +  RH+
Sbjct: 85  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQVVNIPSFLVRMDSQKHI 158


>gi|154508712|ref|ZP_02044354.1| hypothetical protein ACTODO_01220 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798346|gb|EDN80766.1| hypothetical protein ACTODO_01220 [Actinomyces odontolyticus ATCC
           17982]
          Length = 275

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 16/89 (17%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            R+D+ + R     +  AA Q +    V ++G+ V   + +      I V+         
Sbjct: 4   RRIDSELVRRGLAKSRAAAAQMIEDGRVKLDGQIVLKPARQMDPAQAIVVE--------- 54

Query: 154 LEASQLAERDVPEYISVNHDNMVATFVRI 182
                  E D PEY+S     +      +
Sbjct: 55  -------ESDDPEYVSRGAHKLAGVLDAL 76


>gi|45190352|ref|NP_984606.1| AEL255Wp [Ashbya gossypii ATCC 10895]
 gi|44983248|gb|AAS52430.1| AEL255Wp [Ashbya gossypii ATCC 10895]
          Length = 188

 Score = 40.7 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY+     ++  AR  +  RH+ V  + VN+ S+  +
Sbjct: 103 DFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNVPSFMVR 149


>gi|300394140|gb|ADK11698.1| ribosomal protein S9 [Oncorhynchus masou rhodurus]
          Length = 175

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 81  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 140

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 141 LDSQKHIDFSLRS 153


>gi|116193753|ref|XP_001222689.1| 40S ribosomal protein S9 [Chaetomium globosum CBS 148.51]
 gi|88182507|gb|EAQ89975.1| 40S ribosomal protein S9 [Chaetomium globosum CBS 148.51]
          Length = 191

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T+VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|38048283|gb|AAR10044.1| similar to Drosophila melanogaster RpS9 [Drosophila yakuba]
          Length = 163

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 16/126 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSI 73
           K+ ++      G +G R K +       L   +K  +    + EK            R +
Sbjct: 23  KARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRL 82

Query: 74  FKE------ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
            +         +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSY 133
           VNI S+
Sbjct: 143 VNIPSF 148


>gi|326386140|ref|ZP_08207764.1| RNA-binding S4 [Novosphingobium nitrogenifigens DSM 19370]
 gi|326209365|gb|EGD60158.1| RNA-binding S4 [Novosphingobium nitrogenifigens DSM 19370]
          Length = 100

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
              R+D +++  +   T   A+++    H+ +NGR V   S   + GD++ +    +   
Sbjct: 9   PGIRIDKLLWFLRLASTRTFAQEWAGEGHIRLNGRRVERPSATVRAGDILVL--PMRTAV 66

Query: 152 SVLEASQLAERDVPE 166
            V+E   +  R  P 
Sbjct: 67  KVIEVLAIPARRGPA 81


>gi|297728555|ref|NP_001176641.1| Os11g0602501 [Oryza sativa Japonica Group]
 gi|255680249|dbj|BAH95369.1| Os11g0602501 [Oryza sativa Japonica Group]
          Length = 94

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           E RL T+V++A    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 7   EPRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 57


>gi|167042196|gb|ABZ06928.1| putative S4 domain protein [uncultured marine crenarchaeote
           HF4000_ANIW93I24]
          Length = 204

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 2/138 (1%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86
              R          R    +   L LR + + +K    I       +  +        + 
Sbjct: 36  KTKRELWKTQTELSRVRLQARSLLALRQEIRERKEPILIQSLSKIGLVDQNSTLDDVLNL 95

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
            +   L  RL TI  +  +  T + ARQ + H H+++    V I SY  K  +  ++   
Sbjct: 96  QVTDLLSRRLQTITQKKLYFKTPYQARQAIVHGHIMIGDSVVTIPSYIVKTEEETKIHLI 155

Query: 147 SKQLASVLEASQLAERDV 164
           S+      E     E D+
Sbjct: 156 SES--RFNETLSKPESDL 171


>gi|321477093|gb|EFX88052.1| hypothetical protein DAPPUDRAFT_230323 [Daphnia pulex]
 gi|321477340|gb|EFX88299.1| hypothetical protein DAPPUDRAFT_230321 [Daphnia pulex]
          Length = 194

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T V++     +I  AR  +  RH+ V  + VNI S+  +
Sbjct: 105 DFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNIPSFIVR 151


>gi|89099473|ref|ZP_01172349.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085859|gb|EAR64984.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 415

 Score = 40.7 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 10/145 (6%)

Query: 14  RIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY---YGDISEKKF 70
           R+  +L    K  +  +     LH       P    +QL        +     + +E  F
Sbjct: 277 RLATSLPLAEKMSIQEKLEEGSLH-------PRDAKMQLARTIVSMYHGHEAAEKAEDHF 329

Query: 71  RSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNI 130
           +S+F++        +       E  L  ++  A F P+   AR  V +  V +NG     
Sbjct: 330 KSVFQQGSMPEDMPALTWDGSDEPDLLELLMFAGFFPSRSEARWMVLNGGVRMNGEKAED 389

Query: 131 GSYRCKEGDVIEVKQKSKQLASVLE 155
            + +      + ++   ++ A + +
Sbjct: 390 INTKVSLQAELILQVGKRKFARIKK 414


>gi|158563818|gb|ABW74360.1| ribosomal protein S9 [Modiolus modiolus]
          Length = 120

 Score = 40.3 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 27/60 (45%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        L  FLE RL T V++     +I  AR  +  RH+ V  + VNI SY  +
Sbjct: 61  KMKLDYVLGLRLEDFLERRLQTQVFKLGLAKSIHHARVVIRQRHIRVRKQVVNIPSYIVR 120


>gi|67481871|ref|XP_656285.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS]
 gi|56473474|gb|EAL50899.1| 40S ribosomal protein S9, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 185

 Score = 40.3 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           + LE RL T+VYR  F  +I  AR  +  + + V  + V++ S+  +      ++     
Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162

Query: 150 LASVLEASQLAERD 163
             +  E +   +R 
Sbjct: 163 PLTNPEINGRRKRK 176


>gi|194691526|gb|ACF79847.1| unknown [Zea mays]
          Length = 112

 Score = 40.3 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FL+ RL TIV++     +I  AR  +  RH+
Sbjct: 4   YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 55

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 56  RVGRQLVNIPSFMVRVDSEKHI 77


>gi|164422223|gb|ABY55196.1| ribosomal protein S4 [Bambusa oldhamii]
          Length = 344

 Score = 40.3 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTI 109
           ++ +  +K+  YYGD+  ++     +             +   E+R D I  R  F  T+
Sbjct: 53  IKSQTTRKLSLYYGDLPRREMHRGRERTSYIP------FLLNQETRSDVIPVRLHFSDTL 106

Query: 110 FAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
             ARQ ++HR V +N   V I   +   GD+I  ++ 
Sbjct: 107 PQARQPISHRRVCLNNGLVTITHLKVSHGDLISFQEN 143


>gi|146163443|ref|XP_001011432.2| ribosomal protein S4 containing protein [Tetrahymena thermophila]
 gi|319443359|pdb|2XZM|D Chain D, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 1
 gi|319443394|pdb|2XZN|D Chain D, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 2
 gi|146146073|gb|EAR91187.2| ribosomal protein S4 containing protein [Tetrahymena thermophila
           SB210]
 gi|315570309|tpg|DAA33973.1| TPA_exp: 40S ribosomal protein rpS9e [Tetrahymena thermophila]
          Length = 181

 Score = 40.3 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 60  KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
             YG +SE+          +        +   +E RL T V++     +I  +R  +  R
Sbjct: 81  FKYGLLSEQ--------ERKLDYVLGLTIHKLMERRLQTRVFKLNLANSIHHSRVLIRQR 132

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           H+ V    VN+ S+  +      +   S  
Sbjct: 133 HIKVGKNLVNVPSFMVRTDSEKSIDFASTS 162


>gi|307006555|gb|ADN23562.1| ribosomal protein S4 [Hyalomma marginatum rufipes]
          Length = 151

 Score = 40.3 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 49  KMKLDYVLGLRIEDFLERRLQTQVFKHGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 108

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 109 LDSEKHIDFSLKS 121


>gi|167383739|ref|XP_001736652.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760]
 gi|165900833|gb|EDR27065.1| 40S ribosomal protein S9, putative [Entamoeba dispar SAW760]
          Length = 185

 Score = 40.3 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           + LE RL T+VYR  F  +I  AR  +  + + V  + V++ S+  +      ++     
Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162

Query: 150 LASVLEASQLAERD 163
             +  E +   +R 
Sbjct: 163 PLTNPEINGRRKRK 176


>gi|225711720|gb|ACO11706.1| 40S ribosomal protein S9 [Caligus rogercresseyi]
          Length = 190

 Score = 40.3 bits (93), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK-------- 75
           K+ ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 23  KTRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLEEKDPRRLFEGNALLRRL 82

Query: 76  --------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 83  VRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 142

Query: 128 VNIGSYRCKEGDVIEVKQKSKQ 149
           VN+ S+  +      +    K 
Sbjct: 143 VNVPSFVVRLDSQKRIDFSLKS 164


>gi|316969051|gb|EFV53215.1| putative ribosomal protein S4 [Trichinella spiralis]
          Length = 191

 Score = 40.3 bits (93), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 63  GDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           G + E++ +  +    R           FLE RL T V++     +I  AR  +  RH+ 
Sbjct: 84  GVLREEQMKLDYVLGLRVED--------FLERRLQTQVFKKGLAKSIHHARVMILQRHIR 135

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           V  + VN+ S+  +      ++   + 
Sbjct: 136 VRRQVVNVPSFIVRLDSEKHIELSLRS 162


>gi|303274947|ref|XP_003056784.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461136|gb|EEH58429.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 196

 Score = 40.3 bits (93), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 8/91 (8%)

Query: 53  RAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAA 112
            A  +    YG + E +        D+     + +  +FLE RL T+V++     ++  A
Sbjct: 76  EAIMRRMYRYGLLDETQ--------DKLDYVLALSADAFLERRLQTLVFKLGLAKSVHHA 127

Query: 113 RQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           R  +  RH+ V  + VN+ S+  +      +
Sbjct: 128 RVLIRQRHIRVGKQIVNVPSFLVRTDSQKHI 158


>gi|47027041|gb|AAT08735.1| 40S ribosomal protein S9 [Hyacinthus orientalis]
          Length = 197

 Score = 40.3 bits (93), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E++        ++     +  + +FLE RL T V++     +I  AR  +  RH+
Sbjct: 85  YGLLDEEQ--------NKLDYVLALTVENFLERRLQTQVFKTGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCK 136
            V  + VN+ S+  K
Sbjct: 137 RVGRQVVNVPSFLVK 151


>gi|289548511|ref|YP_003473499.1| hemolysin A [Thermocrinis albus DSM 14484]
 gi|289182128|gb|ADC89372.1| hemolysin A [Thermocrinis albus DSM 14484]
          Length = 258

 Score = 40.3 bits (93), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            RLD  +      PT   A+  +    V V+GR V+   +R K  + +E+K+  +
Sbjct: 1   MRLDVYLVEKGLAPTREKAQALIMAGMVTVDGRVVDKPGFRLKGTEKVELKEGLR 55


>gi|293192941|ref|ZP_06609785.1| cytotoxin/hemolysin [Actinomyces odontolyticus F0309]
 gi|292819997|gb|EFF78996.1| cytotoxin/hemolysin [Actinomyces odontolyticus F0309]
          Length = 275

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            R+D+ + R     +  AA Q +    V ++G+ V   + +      I
Sbjct: 4   RRIDSELVRRGLAKSRAAAAQMIEDGRVKLDGQIVLKPARQMDPAQAI 51


>gi|67482301|ref|XP_656500.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS]
 gi|67483353|ref|XP_656950.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS]
 gi|67484266|ref|XP_657353.1| 40S ribosomal protein S9 [Entamoeba histolytica HM-1:IMSS]
 gi|108935891|sp|O15612|RS9_ENTHI RecName: Full=40S ribosomal protein S9
 gi|56473701|gb|EAL51113.1| 40S ribosomal protein S9, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56474185|gb|EAL51568.1| 40S ribosomal protein S9, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56474602|gb|EAL51965.1| 40S ribosomal protein S9, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 185

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           + LE RL T+VYR  F  +I  AR  +  + + V  + V++ S+  +      ++     
Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162

Query: 150 LASVLEASQLAERD 163
             +  E +   +R 
Sbjct: 163 PLTNPEINGRRKRK 176


>gi|318087224|gb|ADV40204.1| 40S ribosomal protein S9 [Latrodectus hesperus]
          Length = 155

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 53  KMKLDYVLGLRVEHFLERRLQTQVFKQGLAKSIHHARVLIRQRHIRVRKQVVNVPSFIVR 112

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 113 LDSEKHIDFSVKS 125


>gi|254577891|ref|XP_002494932.1| ZYRO0A13200p [Zygosaccharomyces rouxii]
 gi|238937821|emb|CAR25999.1| ZYRO0A13200p [Zygosaccharomyces rouxii]
          Length = 198

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
             +     +     FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 90  KKKLDYVLALKPEDFLERRLQTQVYKLGLAKSIHHARVLITQRHIAVGKQIVNVPSF 146


>gi|167382113|ref|XP_001735978.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760]
 gi|167388875|ref|XP_001738729.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760]
 gi|167395168|ref|XP_001741253.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760]
 gi|165894243|gb|EDR22303.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760]
 gi|165897898|gb|EDR24942.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760]
 gi|165901779|gb|EDR27791.1| 40S ribosomal protein S9 [Entamoeba dispar SAW760]
          Length = 185

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           + LE RL T+VYR  F  +I  AR  +  + + V  + V++ S+  +      ++     
Sbjct: 103 NLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNT 162

Query: 150 LASVLEASQLAERD 163
             +  E +   +R 
Sbjct: 163 PLTNPEINGRRKRK 176


>gi|17535707|ref|NP_496384.1| Ribosomal Protein, Small subunit family member (rps-9)
           [Caenorhabditis elegans]
 gi|2500404|sp|Q20228|RS9_CAEEL RecName: Full=40S ribosomal protein S9
 gi|3876944|emb|CAA93262.1| C. elegans protein F40F8.10, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 189

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +   H+ V  + V++ S+  +
Sbjct: 90  KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVR 149


>gi|268532096|ref|XP_002631176.1| C. briggsae CBR-RPS-9 protein [Caenorhabditis briggsae]
 gi|187036984|emb|CAP23650.1| CBR-RPS-9 protein [Caenorhabditis briggsae AF16]
          Length = 189

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +   H+ V  + V++ S+  +
Sbjct: 90  KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVR 149


>gi|71025925|ref|XP_762670.1| ribosomal protein S4 [Theileria parva strain Muguga]
 gi|68349619|gb|EAN30387.1| ribosomal protein S4, putative [Theileria parva]
          Length = 205

 Score = 40.3 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 41  RKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIV 100
           +K K  Y   +L    K+ K   D+ +KK +  F   ++      +  +  L+SRLD ++
Sbjct: 31  KKKKHIYKEYKLPTNIKILKILYDVKDKKLKYSF---NKFLFVNIYKFLKILKSRLDFVL 87

Query: 101 YRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           +      TI  ++Q ++H+H+ +N       SY  K  D+I +   S
Sbjct: 88  FNNNLFSTINQSKQNISHKHIFLNNTIARHPSYCVKNLDIIHLYNIS 134


>gi|308510180|ref|XP_003117273.1| CRE-RPS-9 protein [Caenorhabditis remanei]
 gi|308242187|gb|EFO86139.1| CRE-RPS-9 protein [Caenorhabditis remanei]
          Length = 189

 Score = 40.3 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +   H+ V  + V++ S+  +
Sbjct: 90  KMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVR 149


>gi|192913014|gb|ACF06615.1| 40S ribosomal protein S9 [Elaeis guineensis]
          Length = 197

 Score = 40.3 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           +G + E +        ++     +  + +FLE RL T V+++    +I  AR  +  RH+
Sbjct: 85  FGLLDENQ--------NKLDYVLALTVENFLERRLQTQVFKSGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQLVNIPSFMVRVDSAKHI 158


>gi|322517734|ref|ZP_08070592.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124]
 gi|322123627|gb|EFX95224.1| 30S ribosomal protein S4 [Streptococcus vestibularis ATCC 49124]
          Length = 41

 Score = 40.3 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 3/35 (8%)

Query: 172 HDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +  + +R+P   +           LVVEFY++
Sbjct: 8   AKKLKGSLIRLPERDE---INPETNEALVVEFYNK 39


>gi|269146666|gb|ACZ28279.1| 40S ribosomal protein S9 [Simulium nigrimanum]
          Length = 198

 Score = 40.3 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 3/103 (2%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
           L L  K + + + G+   ++      + +   +        +  FLE RL T V++    
Sbjct: 62  LTLEEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 121

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            +   AR  +  RH+ V  + VN  S+  +      +    K 
Sbjct: 122 KSFHHARVLIRQRHIRVRKQVVNTPSFIVRLDSQKHIDFSLKS 164


>gi|68469667|ref|XP_721085.1| potential cytosolic ribosomal protein S9 [Candida albicans SC5314]
 gi|46442986|gb|EAL02271.1| potential cytosolic ribosomal protein S9 [Candida albicans SC5314]
          Length = 162

 Score = 40.3 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 10/127 (7%)

Query: 23  PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRG 82
            K P   R+    +    +  K     +    ++ ++   G +SE K +  +  A     
Sbjct: 19  SKCPKIRRAAREFVTRGEKGPKKIIRKVMALIRRLVRF--GFLSEDKMKLDYVLA----- 71

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
               N   FL  R    V++     +I  AR  +   H+ V  + V I S+  +      
Sbjct: 72  ---WNPEVFLNRRFQPQVFKLGLARSIPHARVLITQSHIAVGKQIVTIPSFTVRLDSQKH 128

Query: 143 VKQKSKQ 149
           +      
Sbjct: 129 IDFAHNS 135


>gi|209735814|gb|ACI68776.1| 40S ribosomal protein S9 [Salmo salar]
          Length = 194

 Score = 40.3 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  ++VNI S+  +
Sbjct: 91  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQAVNIPSFVVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|189342498|gb|ACD91828.1| ribosomal protein S4 [Cousinia chionophila]
          Length = 45

 Score = 39.9 bits (92), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFG 49
          MS+    + K  RR+G       K P      G  L  Q R  K S + 
Sbjct: 1  MSRXRGPRFKKIRRLGALPGLTNKRP----RAGSDLRNQSRSGKKSQYR 45


>gi|57231027|gb|AAW47274.1| ribosomal protein S4 [Philodendron hederaceum var. oxycardium]
          Length = 271

 Score = 39.9 bits (92), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 70  FRSIFKEADRSRGDTSHNLISF-LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           F     E  R    TS+  +    E+R D I  R  F  TI  ARQ ++HR + VN   V
Sbjct: 30  FHGSITEMHRGTEQTSYIPLQLNPETRSDVIPVRLHFRETISQARQPISHRRLCVNNGIV 89

Query: 129 NIGSYRCKEGDVIEVKQK 146
           ++  ++   GD+I  ++ 
Sbjct: 90  SMTHFKVSHGDLISFQEN 107


>gi|58385426|ref|XP_313936.2| AGAP005061-PB [Anopheles gambiae str. PEST]
 gi|55240453|gb|EAA09489.2| AGAP005061-PB [Anopheles gambiae str. PEST]
          Length = 195

 Score = 39.9 bits (92), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEK----------KFRSIFKE------AD 78
           G +G R K +       L   +K  +    + EK            R + +         
Sbjct: 34  GQYGLRNKREVWRVKYTLAKIRKAARELLTLEEKDEKRLFQGNALLRRLVRIGVLDESRM 93

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
           +        +  FLE RL T V++     +   AR  +  RH+ V  + VN+ S+  +  
Sbjct: 94  KLDYVLGLRIEDFLERRLQTQVFKLGLAKSYHHARVLIRQRHIRVRKQVVNVPSFIVRLD 153

Query: 139 DVIEVKQKSKQ 149
               +    K 
Sbjct: 154 SQKHIDFSLKS 164


>gi|156843340|ref|XP_001644738.1| hypothetical protein Kpol_1024p34 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156847194|ref|XP_001646482.1| hypothetical protein Kpol_1048p55 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115387|gb|EDO16880.1| hypothetical protein Kpol_1024p34 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117159|gb|EDO18624.1| hypothetical protein Kpol_1048p55 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 192

 Score = 39.9 bits (92), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 21/138 (15%)

Query: 20  WGRPKSPVNTRS-----YGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74
           +  PK P  +          G  G + K +      QL   ++  +      EK  + +F
Sbjct: 12  YSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLF 71

Query: 75  KEADRSRGDTSHNLI----------------SFLESRLDTIVYRAKFVPTIFAARQFVNH 118
           +     R  T   ++                 FLE RL T VY+     ++  AR  ++ 
Sbjct: 72  EGNALIRRLTRVGVLSEDKRKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLISQ 131

Query: 119 RHVLVNGRSVNIGSYRCK 136
           RH+ V  + V I S+  +
Sbjct: 132 RHIAVGKQIVTIPSFMVR 149


>gi|226503021|ref|NP_001149705.1| 40S ribosomal protein S9 [Zea mays]
 gi|195629612|gb|ACG36447.1| 40S ribosomal protein S9 [Zea mays]
          Length = 193

 Score = 39.9 bits (92), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FL+ RL TIV++     +I  AR  +  RH+
Sbjct: 85  YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQLVNIPSFMVRVESEKHI 158


>gi|330318726|gb|AEC11023.1| 40S ribosomal protein s9 [Camellia sinensis]
          Length = 148

 Score = 39.9 bits (92), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++     +I  AR  +  RH+
Sbjct: 36  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIRQRHI 87

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 88  RVGRQVVNIASFLVRVDSQKHI 109


>gi|295667371|ref|XP_002794235.1| 40S ribosomal protein S9 [Paracoccidioides brasiliensis Pb01]
 gi|225680017|gb|EEH18301.1| 40S ribosomal protein S9-2 [Paracoccidioides brasiliensis Pb03]
 gi|226286341|gb|EEH41907.1| 40S ribosomal protein S9 [Paracoccidioides brasiliensis Pb01]
 gi|226291800|gb|EEH47228.1| 40S ribosomal protein S9 [Paracoccidioides brasiliensis Pb18]
          Length = 191

 Score = 39.9 bits (92), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144


>gi|67084055|gb|AAY66962.1| 40S ribosomal protein S9 [Ixodes scapularis]
          Length = 192

 Score = 39.9 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 90  KMKLDYVLGLRIEDFLERRLQTQVFKHGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 149

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 150 LDSEKHIDFSLKS 162


>gi|2897739|dbj|BAA24900.1| ribosomal protein S9 [Schizosaccharomyces pombe]
          Length = 184

 Score = 39.9 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 96  DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 139


>gi|300521574|gb|ADK25998.1| r-protein S4p [Candidatus Nitrososphaera gargensis]
          Length = 170

 Score = 39.9 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 43/109 (39%)

Query: 28  NTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHN 87
           N R          R    +   L L A+ + +K    ++      + KE        +  
Sbjct: 37  NKRELWKAQTEVARIRNQARALLALSAEARAEKEKRLLNFLNRLGLAKEGATLDDILNLK 96

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +   LE RL TIV +     + + ARQ V+H HV +  R VNI  Y  +
Sbjct: 97  VEDLLERRLQTIVMKKSGTKSPYQARQMVSHGHVSIGSRKVNIPGYLVR 145


>gi|241859223|ref|XP_002416200.1| 40S ribosomal protein S9, putative [Ixodes scapularis]
 gi|215510414|gb|EEC19867.1| 40S ribosomal protein S9, putative [Ixodes scapularis]
          Length = 192

 Score = 39.9 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 90  KMKLDYVLGLRIEDFLERRLQTQVFKHGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 149

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 150 LDSEKHIDFSLKS 162


>gi|19113857|ref|NP_592945.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe 972h-]
 gi|1173181|sp|Q09757|RS9A_SCHPO RecName: Full=40S ribosomal protein S9-A
 gi|984704|emb|CAA90851.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe]
          Length = 191

 Score = 39.9 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 146


>gi|19112632|ref|NP_595840.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe 972h-]
 gi|6094199|sp|O59675|RS9B_SCHPO RecName: Full=40S ribosomal protein S9-B
 gi|3006148|emb|CAA18389.1| 40S ribosomal protein S9 [Schizosaccharomyces pombe]
          Length = 192

 Score = 39.9 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 146


>gi|294950672|ref|XP_002786733.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983]
 gi|239901052|gb|EER18529.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983]
          Length = 188

 Score = 39.9 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             LE RL T V++     ++  AR  +  RH+ V  +  ++ S+  +
Sbjct: 104 KMLERRLQTKVFKLGLAKSVHHARVLIKQRHIRVGKQICDVPSFMVR 150


>gi|154273951|ref|XP_001537827.1| 40S ribosomal protein S9 [Ajellomyces capsulatus NAm1]
 gi|150415435|gb|EDN10788.1| 40S ribosomal protein S9 [Ajellomyces capsulatus NAm1]
          Length = 178

 Score = 39.9 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144


>gi|330795964|ref|XP_003286040.1| rp1024 protein [Dictyostelium purpureum]
 gi|325084038|gb|EGC37476.1| rp1024 protein [Dictyostelium purpureum]
          Length = 186

 Score = 39.9 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            ++     +  +  F+E RL T+V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 88  KNKLDYVLNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVR 147

Query: 137 EGDVIEVKQKSKQ 149
                 +   S  
Sbjct: 148 VESQKHLGLASTS 160


>gi|167044120|gb|ABZ08803.1| putative S4 domain protein [uncultured marine crenarchaeote
           HF4000_APKG5C13]
          Length = 204

 Score = 39.9 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 2/138 (1%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSH 86
              R          R    +   L LR + + +K    I       +  +        + 
Sbjct: 36  KTKRELWKTQTKLSRVRLQARSLLALRQEIRERKEPILIQSLSKIGLVDQNSTLDDVLNL 95

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
            +   L  RL TI  +  +  T + ARQ + H HV++    V I SY  K  +  +++  
Sbjct: 96  QVTDLLSRRLQTIAQKKLYFKTPYQARQAIVHGHVMIEDSVVTIPSYIVKTEEETKIRLI 155

Query: 147 SKQLASVLEASQLAERDV 164
            +      E     E D+
Sbjct: 156 PES--RFNETLSKPESDL 171


>gi|5381275|dbj|BAA82319.1| ribosomal protein S9 homolog [Schizosaccharomyces pombe]
          Length = 189

 Score = 39.5 bits (91), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 100 DFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSF 143


>gi|313681945|ref|YP_004059683.1| hemolysin a [Sulfuricurvum kujiense DSM 16994]
 gi|313154805|gb|ADR33483.1| hemolysin A [Sulfuricurvum kujiense DSM 16994]
          Length = 236

 Score = 39.5 bits (91), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD+ +    FV +   A+Q +    V V G+ V+  S+   EG  + +          
Sbjct: 1   MRLDSYLVEQGFVESRTKAQQLIKEHAVSVEGKIVDKVSFDVAEGMEVVLADT----EIY 56

Query: 154 LEASQLAERDVPEYISVNHDNMVAT 178
           +  + +  +    Y       + A 
Sbjct: 57  VSRAAIKLKGFLPYTEWEIKGLRAL 81


>gi|193290616|gb|ACF17616.1| S-9 [Lagenorhynchus obliquidens]
          Length = 126

 Score = 39.5 bits (91), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 16/124 (12%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 3   KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 62

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
                      +        +  FLE RL T V++     +I  AR  +  RH+ V  + 
Sbjct: 63  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQV 122

Query: 128 VNIG 131
           VNI 
Sbjct: 123 VNIP 126


>gi|242083466|ref|XP_002442158.1| hypothetical protein SORBIDRAFT_08g015270 [Sorghum bicolor]
 gi|241942851|gb|EES15996.1| hypothetical protein SORBIDRAFT_08g015270 [Sorghum bicolor]
          Length = 195

 Score = 39.5 bits (91), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG ++E + +  +  A      T+ N ++    RL T+V++A    +I  AR  +  RH+
Sbjct: 85  YGLLAEGQNKLDYVLAL-----TAENFLA---RRLQTLVFKAGMAKSIHHARVLIKQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGRQIVNVPSFMVRVESEKHI 158


>gi|149391809|gb|ABR25839.1| 40S ribosomal protein S9 [Oryza sativa Indica Group]
          Length = 116

 Score = 39.5 bits (91), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +FL  RL T+V++A    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 26  NFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 79


>gi|256832356|ref|YP_003161083.1| hemolysin A [Jonesia denitrificans DSM 20603]
 gi|256685887|gb|ACV08780.1| hemolysin A [Jonesia denitrificans DSM 20603]
          Length = 310

 Score = 39.5 bits (91), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
            RLD  V      P+   A + ++   V VNGRS+   ++     D I +K
Sbjct: 8   RRLDVTVVMRGLAPSRNRAARIISDGAVFVNGRSITKPAWPVHNADTITLK 58


>gi|91983770|gb|ABE68882.1| 40S ribosomal protein S9 [Rhizoctonia solani]
          Length = 203

 Score = 39.5 bits (91), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
           L+L AK   + + G+   ++      + +   R     +  +  FLE RL T V+++   
Sbjct: 60  LKLEAKDPKRLFEGNALIRRLVRIGVLDENRMRLDYVLALKIEDFLERRLQTQVFKSGLA 119

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSY 133
            +I  AR  +  RH+ V  + VN+ S+
Sbjct: 120 KSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|317012201|gb|ADU82809.1| hemolysin [Helicobacter pylori Lithuania75]
          Length = 235

 Score = 39.5 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++      +   A+  V    VLVN   V+  S+  KEGD IE+  +       
Sbjct: 1   MRLDYALFNQHLANSREKAKALVLKNQVLVNKMVVSKPSFIVKEGDKIEIVAE------- 53

Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180
                 A   +  ++  +  +     V
Sbjct: 54  KLFVSRAGEKLVAFLETHFVDFKGKVV 80


>gi|213409367|ref|XP_002175454.1| 40S ribosomal protein S9-A [Schizosaccharomyces japonicus yFS275]
 gi|212003501|gb|EEB09161.1| 40S ribosomal protein S9-A [Schizosaccharomyces japonicus yFS275]
          Length = 190

 Score = 39.5 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|196000400|ref|XP_002110068.1| S9 ribosomal protein [Trichoplax adhaerens]
 gi|190588192|gb|EDV28234.1| S9 ribosomal protein [Trichoplax adhaerens]
          Length = 194

 Score = 39.5 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 88  KMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNVPSF 144


>gi|261204665|ref|XP_002629546.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis SLH14081]
 gi|239587331|gb|EEQ69974.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis SLH14081]
 gi|239614129|gb|EEQ91116.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis ER-3]
 gi|327353900|gb|EGE82757.1| 40S ribosomal protein S9 [Ajellomyces dermatitidis ATCC 18188]
          Length = 191

 Score = 39.5 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|91983753|gb|ABE68880.1| 40S ribosomal protein S9 [Rhizoctonia solani]
          Length = 176

 Score = 39.5 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
           L+L AK   + + G+    +      + +   R     +  +  FLE RL T V+++   
Sbjct: 60  LKLEAKDPKRLFEGNALIHRLVRIGVLDENRMRLDYVLALKIEDFLERRLQTQVFKSGLA 119

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSY 133
            +I  AR  +  RH+ V  + VN+ S+
Sbjct: 120 KSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|225559283|gb|EEH07566.1| 40S ribosomal protein S9 [Ajellomyces capsulatus G186AR]
          Length = 191

 Score = 39.5 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T VY+     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTQVYQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144


>gi|213402101|ref|XP_002171823.1| 40S ribosomal protein S9 [Schizosaccharomyces japonicus yFS275]
 gi|211999870|gb|EEB05530.1| 40S ribosomal protein S9 [Schizosaccharomyces japonicus yFS275]
          Length = 190

 Score = 39.5 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|313103652|pdb|3IZ6|C Chain C, Localization Of The Small Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
          Length = 195

 Score = 39.5 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 3/118 (2%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85
            R      +   R    +   L L  K   + + G+   ++           ++     +
Sbjct: 41  KRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLA 100

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             + +FL  RL T+V++A    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 101 LTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 158


>gi|115450807|ref|NP_001049004.1| Os03g0154700 [Oryza sativa Japonica Group]
 gi|115486179|ref|NP_001068233.1| Os11g0602600 [Oryza sativa Japonica Group]
 gi|77551802|gb|ABA94599.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77551804|gb|ABA94601.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa
           Japonica Group]
 gi|108706253|gb|ABF94048.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa
           Japonica Group]
 gi|108864567|gb|ABG22548.1| 40S ribosomal protein S9, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113547475|dbj|BAF10918.1| Os03g0154700 [Oryza sativa Japonica Group]
 gi|113645455|dbj|BAF28596.1| Os11g0602600 [Oryza sativa Japonica Group]
 gi|125534929|gb|EAY81477.1| hypothetical protein OsI_36650 [Oryza sativa Indica Group]
 gi|125577658|gb|EAZ18880.1| hypothetical protein OsJ_34422 [Oryza sativa Japonica Group]
 gi|149390861|gb|ABR25448.1| 40S ribosomal protein S9 [Oryza sativa Indica Group]
 gi|215678994|dbj|BAG96424.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215692450|dbj|BAG87870.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704252|dbj|BAG93092.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737426|dbj|BAG96556.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737741|dbj|BAG96871.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740779|dbj|BAG96935.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186015|gb|EEC68442.1| hypothetical protein OsI_36651 [Oryza sativa Indica Group]
 gi|222616230|gb|EEE52362.1| hypothetical protein OsJ_34424 [Oryza sativa Japonica Group]
 gi|222624211|gb|EEE58343.1| hypothetical protein OsJ_09456 [Oryza sativa Japonica Group]
          Length = 195

 Score = 39.5 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 3/118 (2%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSI---FKEADRSRGDTS 85
            R      +   R    +   L L  K   + + G+   ++           ++     +
Sbjct: 41  KRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLA 100

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             + +FL  RL T+V++A    +I  AR  +  RH+ V  + VNI S+  +      +
Sbjct: 101 LTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHI 158


>gi|294949544|ref|XP_002786250.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983]
 gi|239900407|gb|EER18046.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983]
          Length = 188

 Score = 39.1 bits (90), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             LE RL T V++     ++  AR  +  RH+ V  +  ++ S+  +
Sbjct: 104 KMLERRLQTKVFKLGLAKSVHHARVLIKQRHIRVGKQICDVPSFMVR 150


>gi|66804533|ref|XP_635999.1| ribosomal protein 1024 [Dictyostelium discoideum AX4]
 gi|131770|sp|P14132|RS9_DICDI RecName: Full=40S ribosomal protein S9; AltName: Full=40S ribosomal
           protein 1024; AltName: Full=Vegetative-specific protein
           V12
 gi|7353|emb|CAA29844.1| rp1024 protein [Dictyostelium discoideum]
 gi|60464302|gb|EAL62451.1| ribosomal protein 1024 [Dictyostelium discoideum AX4]
          Length = 185

 Score = 39.1 bits (90), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            ++     +  +  F+E RL T+V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 87  KNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVR 146

Query: 137 EGDVIEVKQKSKQ 149
                 +   S  
Sbjct: 147 VESQKHLGLASTS 159


>gi|328853943|gb|EGG03078.1| hypothetical protein MELLADRAFT_75362 [Melampsora larici-populina
           98AG31]
          Length = 182

 Score = 39.1 bits (90), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 35  GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF------KEADRSRGDTSHNL 88
           G  G R K +     L L   ++  +    + +K  + +F      +  D      + N+
Sbjct: 32  GEFGLRNKREIWRIALTLSKIRRAARELLKLEDKDPKRLFEGNALIRRLDEMDYVLALNI 91

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
             F+E RL T ++++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 92  EDFMERRLQTQLFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 136


>gi|53793731|gb|AAU93594.1| 40S ribosomal protein S9 , putative [Solanum demissum]
          Length = 197

 Score = 39.1 bits (90), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++     +I  AR  +  RH+
Sbjct: 85  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGRQVVNVASFMVRVDSQKHI 158


>gi|268679994|ref|YP_003304425.1| hemolysin A [Sulfurospirillum deleyianum DSM 6946]
 gi|268618025|gb|ACZ12390.1| hemolysin A [Sulfurospirillum deleyianum DSM 6946]
          Length = 238

 Score = 39.1 bits (90), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  V+   F  +   A + +    V VNG      S+   E D ++V++ S+ ++  
Sbjct: 1   MRLDNYVFEKGFAQSRNKASELIKEGSVWVNGNVERKSSFEVCENDKVDVEKISQYVSRA 60

Query: 154 LEASQLAERDVPEY---ISV-NHDNMVATFVRI 182
               +    D+  +   + V +  +    FV++
Sbjct: 61  GLKLRGFINDLSLHVKGLEVLDIGSSTGGFVQV 93


>gi|242210417|ref|XP_002471051.1| ribosomal protein S9 [Postia placenta Mad-698-R]
 gi|242217357|ref|XP_002474479.1| 40S ribosomal protein S9 [Postia placenta Mad-698-R]
 gi|220726394|gb|EED80345.1| 40S ribosomal protein S9 [Postia placenta Mad-698-R]
 gi|220729841|gb|EED83708.1| ribosomal protein S9 [Postia placenta Mad-698-R]
          Length = 192

 Score = 39.1 bits (90), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++A    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKAGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|145487528|ref|XP_001429769.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145546530|ref|XP_001458948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124396863|emb|CAK62371.1| unnamed protein product [Paramecium tetraurelia]
 gi|124426770|emb|CAK91551.1| unnamed protein product [Paramecium tetraurelia]
          Length = 185

 Score = 39.1 bits (90), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%)

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
           F  + ++  +            +E RL T V+++    +I  AR  +  RH  V  R VN
Sbjct: 83  FGLLSEQERKLDYVLGLTTQKMMERRLQTFVFKSNQASSIHHARTLIRQRHFRVGKRLVN 142

Query: 130 IGSYRCKEGDV 140
             S+  +    
Sbjct: 143 SPSFLVRVESE 153


>gi|161669250|gb|ABX75477.1| 40S ribosomal protein S9 [Lycosa singoriensis]
          Length = 175

 Score = 39.1 bits (90), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 73  RMKLDYVLGLRVEHFLERRLQTQVFKQGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVR 132

Query: 137 EGDVIEVKQKSKQ 149
                 +    K 
Sbjct: 133 LDSEKHIDFSLKS 145


>gi|76573325|gb|ABA46767.1| unknown [Solanum tuberosum]
          Length = 197

 Score = 39.1 bits (90), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FLE RL T+V++     +I  AR  +  RH+
Sbjct: 85  YGLLDESQ--------NKLDYVLALTVENFLERRLQTLVFKTGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VN+ S+  +      +
Sbjct: 137 RVGRQVVNVASFMVRVDSQKHI 158


>gi|170756305|ref|YP_001780828.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169121517|gb|ACA45353.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 400

 Score = 39.1 bits (90), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E+ F++IF++      D     ++  E+ +  ++ +AKF P+   AR+ V    V +NG 
Sbjct: 314 EENFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            V+     CK  +   ++   K+   +L
Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397


>gi|168183056|ref|ZP_02617720.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|237794488|ref|YP_002862040.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673865|gb|EDT85826.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|229260524|gb|ACQ51557.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 400

 Score = 39.1 bits (90), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 55  KQKMKKYYG----DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIF 110
           K+ ++ Y+G      +E  F++IF++      D     ++  E+ +  ++ +AKF P+  
Sbjct: 298 KEIVRLYHGKEASTKAEANFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKN 356

Query: 111 AARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            AR+ V    V +NG  V+     CK  +   ++   K+   +L
Sbjct: 357 EARRLVKQGAVKINGEKVDE---ECKVKNEDILQVGKKKFIKIL 397


>gi|281202989|gb|EFA77190.1| ribosomal protein 1024 [Polysphondylium pallidum PN500]
          Length = 217

 Score = 39.1 bits (90), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 16/164 (9%)

Query: 2   SKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKY 61
           S+  +   K  R          K  ++      G +G + KS+     L L   +K  + 
Sbjct: 27  SRYRAESAKDSRTNSTPRRPFEKERLDNELKIVGEYGLKNKSEVWRVQLALAKIRKSARE 86

Query: 62  YGDISEKKFRSIFK----------------EADRSRGDTSHNLISFLESRLDTIVYRAKF 105
              + EK  R +F+                  ++     +  +  F+E RL T+V++   
Sbjct: 87  LLVLDEKDSRRMFEGASLLRRLHKLGVLEESKNKLDYILNLKVQDFMERRLQTMVFKQGL 146

Query: 106 VPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             +I  AR  +  RH+ V  + VN+ S+  +      +      
Sbjct: 147 AKSIHHARCLIKGRHIRVGKQLVNVASFLVRVDSQKHIGYHPNS 190


>gi|212721578|ref|NP_001131442.1| hypothetical protein LOC100192774 [Zea mays]
 gi|195617050|gb|ACG30355.1| 40S ribosomal protein S9 [Zea mays]
          Length = 193

 Score = 39.1 bits (90), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FL+ RL TIV++     +I  AR  +  RH+
Sbjct: 85  YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQLVNIPSFMVRVDSEKHI 158


>gi|242050970|ref|XP_002463229.1| hypothetical protein SORBIDRAFT_02g040120 [Sorghum bicolor]
 gi|241926606|gb|EER99750.1| hypothetical protein SORBIDRAFT_02g040120 [Sorghum bicolor]
          Length = 194

 Score = 39.1 bits (90), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FL+ RL TIV++     +I  AR  +  RH+
Sbjct: 85  YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQLVNIPSFMVRVESEKHI 158


>gi|242050962|ref|XP_002463225.1| hypothetical protein SORBIDRAFT_02g040080 [Sorghum bicolor]
 gi|241926602|gb|EER99746.1| hypothetical protein SORBIDRAFT_02g040080 [Sorghum bicolor]
          Length = 194

 Score = 39.1 bits (90), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 62  YGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV 121
           YG + E +        ++     +  + +FL+ RL TIV++     +I  AR  +  RH+
Sbjct: 85  YGLLGEGQ--------NKLDYVLALTVENFLQRRLQTIVFKNGMAKSIHHARVLIRQRHI 136

Query: 122 LVNGRSVNIGSYRCKEGDVIEV 143
            V  + VNI S+  +      +
Sbjct: 137 RVGRQLVNIPSFMVRVESEKHI 158


>gi|85707561|ref|ZP_01038631.1| S4 domain protein [Roseovarius sp. 217]
 gi|85667918|gb|EAQ22809.1| S4 domain protein [Roseovarius sp. 217]
          Length = 126

 Score = 39.1 bits (90), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           ++ RLD  +++A+F  T   A + V+  HV VNG  V+  +      DV+   Q ++   
Sbjct: 6   VKIRLDKWLWQARFFKTRTLAAKEVSAGHVRVNGARVSKPAQAVGPQDVLTFSQATR--V 63

Query: 152 SVLEASQLAERDVPE 166
            V+   ++  R  P 
Sbjct: 64  RVVRIVEIGTRRGPA 78


>gi|259417109|ref|ZP_05741028.1| RNA-binding S4 [Silicibacter sp. TrichCH4B]
 gi|259346015|gb|EEW57829.1| RNA-binding S4 [Silicibacter sp. TrichCH4B]
          Length = 124

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + R+D  ++ A+F  T   A + V   HV VNG   +  S     GDV+      +    
Sbjct: 7   KMRVDKWLWHARFFKTRSLAAKQVGAGHVRVNGSKASKPSQNVAVGDVLTF--SQRHQVR 64

Query: 153 VLEASQLAERDVPE 166
           V+    L+ER  P 
Sbjct: 65  VVRILALSERRGPA 78


>gi|322688777|ref|YP_004208511.1| hypothetical protein BLIF_0590 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320460113|dbj|BAJ70733.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 257

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           RLD ++  +  V +   A++ +   HV V+G ++   S+  K G 
Sbjct: 14  RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|320458888|dbj|BAJ69509.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 257

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           RLD ++  +  V +   A++ +   HV V+G ++   S+  K G 
Sbjct: 14  RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|296453816|ref|YP_003660959.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301]
 gi|296183247|gb|ADH00129.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301]
          Length = 257

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           RLD ++  +  V +   A++ +   HV V+G ++   S+  K G 
Sbjct: 14  RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|227546214|ref|ZP_03976263.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239622217|ref|ZP_04665248.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133063|ref|YP_004000402.1| rRNA methylase [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481833|ref|ZP_07940861.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690767|ref|YP_004220337.1| hypothetical protein BLLJ_0577 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|227213195|gb|EEI81067.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239514214|gb|EEQ54081.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517152|emb|CBK70768.1| hemolysin TlyA family protein [Bifidobacterium longum subsp. longum
           F8]
 gi|311774055|gb|ADQ03543.1| Putative rRNA methylase [Bifidobacterium longum subsp. longum
           BBMN68]
 gi|316916770|gb|EFV38164.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455623|dbj|BAJ66245.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 257

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           RLD ++  +  V +   A++ +   HV V+G ++   S+  K G 
Sbjct: 14  RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|213692730|ref|YP_002323316.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213524191|gb|ACJ52938.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 276

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           RLD ++  +  V +   A++ +   HV V+G ++   S+  K G 
Sbjct: 33  RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 77


>gi|23465615|ref|NP_696218.1| hemolysin-like protein [Bifidobacterium longum NCC2705]
 gi|23326286|gb|AAN24854.1| hemolysin-like protein with S4 domain found in bacteria and plants
           [Bifidobacterium longum NCC2705]
          Length = 280

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           RLD ++  +  V +   A++ +   HV V+G ++   S+  K G 
Sbjct: 37  RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 81


>gi|46191091|ref|ZP_00206673.1| COG1189: Predicted rRNA methylase [Bifidobacterium longum DJO10A]
 gi|189439661|ref|YP_001954742.1| putative rRNA methylase [Bifidobacterium longum DJO10A]
 gi|189428096|gb|ACD98244.1| Putative rRNA methylase [Bifidobacterium longum DJO10A]
          Length = 257

 Score = 39.1 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           RLD ++  +  V +   A++ +   HV V+G ++   S+  K G 
Sbjct: 14  RLDMMLVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|5923991|emb|CAB56530.1| v12 [Dictyostelium discoideum]
          Length = 124

 Score = 39.1 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            ++     +  +  F+E RL T+V++     +I  AR  +  RH+ V  + VN+ S+  +
Sbjct: 26  KNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVR 85

Query: 137 EGDVIEVKQKSKQ 149
                 +   S  
Sbjct: 86  VESQKHLGLASTS 98


>gi|255710311|gb|ACU30975.1| ribosomal protein S9 [Ochlerotatus triseriatus]
          Length = 158

 Score = 39.1 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 3/103 (2%)

Query: 50  LQLRAKQKMKKYYGDISEKKFRS---IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
           L L  K + + + G+   ++      + +   +        +  FLE RL T V++    
Sbjct: 25  LTLEEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 84

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            +   AR  +  RH+ V  + VNI S+  +      +    K 
Sbjct: 85  KSYHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKS 127


>gi|167042557|gb|ABZ07281.1| putative S4 domain protein [uncultured marine microorganism
           HF4000_ANIW133F6]
 gi|167043058|gb|ABZ07769.1| putative S4 domain protein [uncultured marine microorganism
           HF4000_ANIW141C7]
          Length = 230

 Score = 39.1 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            L  RL ++VY     P++ A+R  + H H+ +  + + +  Y
Sbjct: 106 MLARRLQSVVYYRGLAPSMRASRNMIVHGHISIGEQRMTVPGY 148


>gi|84687445|ref|ZP_01015323.1| S4 domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664603|gb|EAQ11089.1| S4 domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 134

 Score = 39.1 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 30/73 (41%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            R D  ++ A+F  T   A + +   H+ VNG  V   S+    GDV+   Q  +     
Sbjct: 18  MRADKWLWHARFFKTRGLATKLIAAGHLRVNGTKVAKASHGIGAGDVLTFPQARRVRVVR 77

Query: 154 LEASQLAERDVPE 166
           L+A        PE
Sbjct: 78  LKALSERRGPAPE 90


>gi|207108316|ref|ZP_03242478.1| hypothetical protein HpylH_01458 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 35

 Score = 39.1 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)

Query: 170 VNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              +     F R P   + V   V ++  L+VE YS+
Sbjct: 2   WKKNKKYGIFTRYPEREEVV---VPIEERLIVELYSK 35


>gi|170084629|ref|XP_001873538.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651090|gb|EDR15330.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 193

 Score = 38.8 bits (89), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V+++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|164657432|ref|XP_001729842.1| hypothetical protein MGL_2828 [Malassezia globosa CBS 7966]
 gi|159103736|gb|EDP42628.1| hypothetical protein MGL_2828 [Malassezia globosa CBS 7966]
          Length = 202

 Score = 38.8 bits (89), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
            FLE RL T VY++    +I  AR  +  RH+ V  + V   S+  +
Sbjct: 110 DFLERRLQTQVYKSGLARSIHHARVLIFQRHIRVGKQIVTSPSFIVR 156


>gi|187780180|ref|ZP_02996653.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
 gi|187773805|gb|EDU37607.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
          Length = 400

 Score = 38.8 bits (89), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E+ F++IF++      D      +  E+ +  ++ +A+F P+   AR+ V    V VNG 
Sbjct: 314 EENFKNIFQQG-NMPEDIDTLEANLDETNIVDLIVKAEFAPSKNEARRLVKQGAVKVNGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
            V+     CK  +   ++   K+   +L 
Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKILN 398


>gi|170084631|ref|XP_001873539.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651091|gb|EDR15331.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 191

 Score = 38.8 bits (89), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V+++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 144


>gi|58267458|ref|XP_570885.1| hypothetical protein CNE02160 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134111931|ref|XP_775501.1| hypothetical protein CNBE2150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258160|gb|EAL20854.1| hypothetical protein CNBE2150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227119|gb|AAW43578.1| hypothetical protein CNE02160 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 193

 Score = 38.8 bits (89), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     ++  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKLGLAKSVHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|226948471|ref|YP_002803562.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843127|gb|ACO85793.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 400

 Score = 38.8 bits (89), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E  F++IF++      D     ++  E+ +  ++ +AKF P+   AR+ V    V +NG 
Sbjct: 314 EVNFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            V+     CK  +   ++   K+   +L
Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397


>gi|326495224|dbj|BAJ85708.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 195

 Score = 38.8 bits (89), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            F+E RL T V+++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFMERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|254563752|ref|YP_003070847.1| ribosome-associated RNA-binding protein S4-like protein
           [Methylobacterium extorquens DM4]
 gi|254271030|emb|CAX27037.1| putative ribosome-associated RNA-binding protein S4 paralog,
           putative heat-shock protein [Methylobacterium extorquens
           DM4]
          Length = 91

 Score = 38.8 bits (89), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+F  T   A + V+  HV VNG   +  +     GDV+ V      +  
Sbjct: 5   RQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRADAPAKAIHCGDVLTVAAPHGTMLV 64

Query: 153 VLEASQLAERDVPE 166
            +          PE
Sbjct: 65  RVLDLGERRGGAPE 78


>gi|312869508|ref|ZP_07729663.1| S4 domain protein [Lactobacillus oris PB013-T2-3]
 gi|311094955|gb|EFQ53244.1| S4 domain protein [Lactobacillus oris PB013-T2-3]
          Length = 260

 Score = 38.8 bits (89), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            D      +    RLD  V  A F  +   A+Q V H  V +N   V+    +    D+I
Sbjct: 171 EDWEPLTTTVSSLRLD-AVVAAGFNYSRNRAKQLVEHGQVRLNWEEVDRPDEQVVVHDLI 229

Query: 142 EVKQKSK 148
            V+   +
Sbjct: 230 SVRHGGR 236


>gi|255326173|ref|ZP_05367259.1| ribosomal RNA large subunit methyltransferase J [Rothia
           mucilaginosa ATCC 25296]
 gi|255296627|gb|EET75958.1| ribosomal RNA large subunit methyltransferase J [Rothia
           mucilaginosa ATCC 25296]
          Length = 242

 Score = 38.8 bits (89), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 22/52 (42%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            RLD  +  A FV +   A + +    V VNG+     S      D + V+Q
Sbjct: 1   MRLDKYLVEAGFVSSRTLAAKLIAAGDVQVNGKVARKASMLVGPEDTLYVRQ 52


>gi|148379187|ref|YP_001253728.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933038|ref|YP_001383564.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936237|ref|YP_001387113.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148288671|emb|CAL82752.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929082|gb|ABS34582.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932151|gb|ABS37650.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 400

 Score = 38.8 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E  F++IF++      D     ++  E+ +  ++ +AKF P+   AR+ V    V +NG 
Sbjct: 314 EVNFKNIFQQG-NIPEDIDIIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            V+     CK  +   ++   K+   +L
Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397


>gi|327401288|ref|YP_004342127.1| RNA-binding S4 domain-containing protein [Archaeoglobus veneficus
           SNP6]
 gi|327316796|gb|AEA47412.1| RNA-binding S4 domain protein [Archaeoglobus veneficus SNP6]
          Length = 218

 Score = 38.8 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 23/55 (41%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            RLD  +    F  T   A++ +    V VNG  V   S R      IEV+ + +
Sbjct: 1   MRLDQFLVSKGFFTTRQKAKEAIKRGFVFVNGVRVTKPSARVSGDAEIEVRCEER 55


>gi|331225191|ref|XP_003325266.1| 40S ribosomal protein S9 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309304256|gb|EFP80847.1| 40S ribosomal protein S9 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 192

 Score = 38.8 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            F+E RL T V+++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFMERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|188584089|ref|YP_001927534.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001]
 gi|179347587|gb|ACB82999.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001]
          Length = 91

 Score = 38.8 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 28/74 (37%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+F  T   A + V   HV VNG   +  +     GDV+ V      +  
Sbjct: 5   RQRLDKWLWFARFARTRSMAARLVTDGHVRVNGTRADAPAKAVHCGDVLTVAAPHGTMLV 64

Query: 153 VLEASQLAERDVPE 166
            +          PE
Sbjct: 65  RVLDLGERRGGAPE 78


>gi|328848137|gb|EGF97386.1| hypothetical protein MELLADRAFT_41264 [Melampsora larici-populina
           98AG31]
          Length = 136

 Score = 38.8 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            F+E RL T V+++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 47  DFMERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 90


>gi|240141241|ref|YP_002965721.1| putative ribosome-associated RNA-binding protein S4 paralog,
           putative heat-shock protein [Methylobacterium extorquens
           AM1]
 gi|240011218|gb|ACS42444.1| putative ribosome-associated RNA-binding protein S4 paralog,
           putative heat-shock protein [Methylobacterium extorquens
           AM1]
          Length = 91

 Score = 38.8 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+F  T   A + V+  HV VNG   +  +     GDV+ V      +  
Sbjct: 5   RQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHGTMLV 64

Query: 153 VLEASQLAERDVPE 166
            +          PE
Sbjct: 65  RVLDLGERRGGAPE 78


>gi|163853789|ref|YP_001641832.1| RNA-binding S4 domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|218532733|ref|YP_002423549.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum
           CM4]
 gi|163665394|gb|ABY32761.1| RNA-binding S4 domain protein [Methylobacterium extorquens PA1]
 gi|218525036|gb|ACK85621.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum
           CM4]
          Length = 91

 Score = 38.8 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+F  T   A + V+  HV VNG   +  +     GDV+ V      +  
Sbjct: 5   RQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHGTMLV 64

Query: 153 VLEASQLAERDVPE 166
            +          PE
Sbjct: 65  RVLDLGERRGGAPE 78


>gi|169845523|ref|XP_001829481.1| 40S ribosomal protein S9 [Coprinopsis cinerea okayama7#130]
 gi|116509546|gb|EAU92441.1| 40S ribosomal protein S9 [Coprinopsis cinerea okayama7#130]
          Length = 192

 Score = 38.8 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKIGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|220921712|ref|YP_002497013.1| RNA-binding S4 domain-containing protein [Methylobacterium nodulans
           ORS 2060]
 gi|219946318|gb|ACL56710.1| RNA-binding S4 domain protein [Methylobacterium nodulans ORS 2060]
          Length = 93

 Score = 38.8 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 30/74 (40%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+F  T   A + +   HV VNG+     S     GDVI V      +A 
Sbjct: 5   RQRLDKWLWFARFAKTRSLAARLIADGHVRVNGQRAEAASKAVAVGDVITVAAAHATMAV 64

Query: 153 VLEASQLAERDVPE 166
            + A        PE
Sbjct: 65  RVLALGERRGPAPE 78


>gi|294900981|ref|XP_002777200.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983]
 gi|239884681|gb|EER09016.1| 40S ribosomal protein S9, putative [Perkinsus marinus ATCC 50983]
          Length = 181

 Score = 38.8 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             LE RL T V++     ++  AR  +  RH+ V  +  ++ S+  +
Sbjct: 104 KMLERRLQTKVFKLGLAKSVHHARVLIKQRHIRVGKQICDVPSFMVR 150


>gi|259503039|ref|ZP_05745941.1| S4 domain-containing protein YlmH [Lactobacillus antri DSM 16041]
 gi|259168905|gb|EEW53400.1| S4 domain-containing protein YlmH [Lactobacillus antri DSM 16041]
          Length = 260

 Score = 38.8 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           RLD  V  A F  +   A+Q V H  V +N   V+    +    D+I V+   +
Sbjct: 184 RLD-AVVAAGFNYSRNRAKQLVEHGQVRLNWEEVDRPDEQVVVHDLISVRHGGR 236


>gi|71012468|ref|XP_758500.1| 40S ribosomal protein S9 (S7) [Ustilago maydis 521]
 gi|46098158|gb|EAK83391.1| RS9_PODAN 40S ribosomal protein S9 (S7) [Ustilago maydis 521]
          Length = 194

 Score = 38.8 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V+++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKSGLAKSIHHARVLIVQRHIRVGKQIVNVPSF 146


>gi|253748055|gb|EET02423.1| Ribosomal protein S9 [Giardia intestinalis ATCC 50581]
          Length = 190

 Score = 38.4 bits (88), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
              +    + RL ++V  +K   ++  AR  +  RH+ V GR VNI SY  +  + 
Sbjct: 100 GLRIEDIFKRRLQSVVVESKLAKSVHHARNIIKARHISVGGRIVNIPSYMVRISNT 155


>gi|294084642|ref|YP_003551400.1| heat shock protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664215|gb|ADE39316.1| heat shock protein, putative [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 140

 Score = 38.4 bits (88), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD  ++ A+F  T   A + +    + +NG  +N        G ++      +    V+
Sbjct: 14  RLDKWLWYARFFKTRSLATRLIASGKLRLNGEVMNKPHRAVVVGQILTF--VQQNDVRVI 71

Query: 155 EASQLAERDVPE 166
           E   L +R  P 
Sbjct: 72  EIVALGQRRGPA 83


>gi|300707323|ref|XP_002995874.1| hypothetical protein NCER_101110 [Nosema ceranae BRL01]
 gi|239605106|gb|EEQ82203.1| hypothetical protein NCER_101110 [Nosema ceranae BRL01]
          Length = 182

 Score = 38.4 bits (88), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 31/74 (41%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           ++LE  L   VY A    ++  +R  +    + + G  +   +Y  K  +   V+  S  
Sbjct: 108 NYLERTLQYRVYSAGLAKSVHHSRWLITKGQISIQGVVIKRPNYVVKADEEAFVEITSYS 167

Query: 150 LASVLEASQLAERD 163
            ++  + ++  ++ 
Sbjct: 168 WSNNTKITKSQKKK 181


>gi|260434066|ref|ZP_05788037.1| RNA-binding S4 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417894|gb|EEX11153.1| RNA-binding S4 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 123

 Score = 38.4 bits (88), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150
             + R+D  +++A+F  T   A + V+  HV VNG      +     GDV+   Q+    
Sbjct: 5   LAKLRIDKWLWQARFFKTRSLAARQVSAGHVRVNGDRAQKPAQTVGPGDVLTFAQERVVR 64

Query: 151 ASVLEASQLAERDVPE 166
              +E         PE
Sbjct: 65  VVRVEILGERRGPAPE 80


>gi|314927283|gb|EFS91114.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           acnes HL044PA1]
          Length = 257

 Score = 38.4 bits (88), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK-- 146
              +  RLD  +  A    +   A + V    V VNG  V   + +    D +   ++  
Sbjct: 8   WQSVHVRLDQALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASDNLVADEEVW 67

Query: 147 -SKQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
            S+    +L A       VP  + ++       F ++
Sbjct: 68  VSRAAYKLLGALDTLGVSVPSKV-LDAGASTGGFTQV 103


>gi|217033347|ref|ZP_03438778.1| hypothetical protein HP9810_9g100 [Helicobacter pylori 98-10]
 gi|216944288|gb|EEC23713.1| hypothetical protein HP9810_9g100 [Helicobacter pylori 98-10]
          Length = 235

 Score = 38.4 bits (88), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 7/87 (8%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++      +   A+  V    VLVN   V+  S+  KE D I       +L + 
Sbjct: 1   MRLDYALFNQHLANSREKAKALVLKNQVLVNNMVVSKPSFMVKESDKI-------ELIAT 53

Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180
                 A   +  ++  +  +     V
Sbjct: 54  NLFVSRAGEKLAAFLETHFVDFKGKVV 80


>gi|206889218|ref|YP_002248052.1| hemolysin A [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741156|gb|ACI20213.1| hemolysin A [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 246

 Score = 38.4 bits (88), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           ++ RLD ++++     +   AR  +    V+VNG  +        E   I + 
Sbjct: 1   MKLRLDQLLFKKGITESREKARALIIEGKVIVNGHKIEKPGTMVDENSEITIC 53


>gi|170759521|ref|YP_001786595.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406510|gb|ACA54921.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 400

 Score = 38.4 bits (88), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E  F++IF++      D     ++  E  +  ++ +AKF P+   AR+ V    V +NG 
Sbjct: 314 EGNFKNIFQQG-NIPEDIDTIKVNLDEINIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            V+     CK  +   ++   K+   +L
Sbjct: 373 KVDE---ECKVKNENILQVGKKKFIKIL 397


>gi|87198148|ref|YP_495405.1| RNA-binding S4 [Novosphingobium aromaticivorans DSM 12444]
 gi|87133829|gb|ABD24571.1| RNA-binding S4 [Novosphingobium aromaticivorans DSM 12444]
          Length = 96

 Score = 38.4 bits (88), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            R+D  ++  +F  T   A+ +V   H+ +NGR +   S   + GDV+ +    +   +V
Sbjct: 1   MRIDKFLWFTRFAGTRNLAQGWVEDGHIRLNGRRIERCSADVRLGDVLVL--PMRSRVTV 58

Query: 154 LEASQLAERDVPE 166
           +E   L  R  P 
Sbjct: 59  IEVLALPARRGPA 71


>gi|157363559|ref|YP_001470326.1| hemolysin A [Thermotoga lettingae TMO]
 gi|157314163|gb|ABV33262.1| hemolysin A [Thermotoga lettingae TMO]
          Length = 265

 Score = 38.4 bits (88), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           ++ RLD IV   K   +   AR  +    V+VNG+        C E D I++ +  + ++
Sbjct: 1   MKKRLDLIVTERKLAASRSQARDLIKLGRVVVNGKICRKPGTICFEEDEIKLCEPRQYVS 60

Query: 152 SVLEASQLA 160
              E  + A
Sbjct: 61  RGGEKLEKA 69


>gi|70940074|ref|XP_740498.1| 40S ribosomal subunit protein S9 [Plasmodium chabaudi chabaudi]
 gi|56518255|emb|CAH80038.1| 40S ribosomal subunit protein S9, putative [Plasmodium chabaudi
           chabaudi]
          Length = 167

 Score = 38.4 bits (88), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 10/123 (8%)

Query: 27  VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEA------DRS 80
            N R      +   +    + + L L  K   + + G   E   R + ++       ++ 
Sbjct: 16  KNKREIWRVQYLLAKIRSAARYLLTLDEKSPKRIFQG---EALLRRMVRQGLLGENEEKL 72

Query: 81  RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV 140
                  L   LE ++   V++     ++  AR  +  RH+ V  + V+I S+  +    
Sbjct: 73  DYVLGLTLPKLLERQI-AKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRIDSE 131

Query: 141 IEV 143
             +
Sbjct: 132 KHI 134


>gi|302673469|ref|XP_003026421.1| 40S ribosomal protein S9 [Schizophyllum commune H4-8]
 gi|300100103|gb|EFI91518.1| 40S ribosomal protein S9 [Schizophyllum commune H4-8]
          Length = 193

 Score = 38.4 bits (88), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V+++    +I  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKSGLAKSIHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|301108221|ref|XP_002903192.1| 40S ribosomal protein S9-1 [Phytophthora infestans T30-4]
 gi|262097564|gb|EEY55616.1| 40S ribosomal protein S9-1 [Phytophthora infestans T30-4]
          Length = 192

 Score = 38.4 bits (88), Expect = 0.65,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%)

Query: 87  NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           N+   LE RL T V++     +I  AR  +  RH+ V  + V++ S+  +      +
Sbjct: 102 NVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHI 158


>gi|294678313|ref|YP_003578928.1| heat shock protein [Rhodobacter capsulatus SB 1003]
 gi|294477133|gb|ADE86521.1| heat shock protein [Rhodobacter capsulatus SB 1003]
          Length = 92

 Score = 38.4 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             R+D  +++A+F  +   A   V    V VNG+ +         GDV+ +   ++    
Sbjct: 6   RIRIDKWLWQARFAKSRALAVDLVTAGRVRVNGQKLEKPGRAVGPGDVLTLVLGAEVRVL 65

Query: 153 VLEASQLAERDVPEYISV 170
            + A        PE +++
Sbjct: 66  RILACGTRRGPAPEAVTL 83


>gi|125536685|gb|EAY83173.1| hypothetical protein OsI_38384 [Oryza sativa Indica Group]
          Length = 173

 Score = 38.4 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 9/114 (7%)

Query: 29  TRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNL 88
            R      +   R    +   L L  K   + + G   E   R + +    + G    + 
Sbjct: 41  KRELWRVQYALSRIRNAARHLLTLDEKNPCRIFEG---EALLRRMNRYGLLAEGQNKLDY 97

Query: 89  I------SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
           +      +FL  RL T+V++A    +I  A   +  RH+ V  + VN+ S+  +
Sbjct: 98  VLALTAENFLARRLQTLVFKAGMAKSIHHACFLIRQRHIRVGRQIVNVPSFMVR 151


>gi|296115140|ref|ZP_06833781.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978241|gb|EFG84978.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC
           23769]
          Length = 115

 Score = 38.4 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 29/69 (42%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++ A+F  +     +F+    V +N +       +   GD++ +    ++   V
Sbjct: 24  QRLDLWLFHARFARSRNDCAEFIAAGQVRINRQRTVKAHAQVHPGDILTLPAPDRRSVMV 83

Query: 154 LEASQLAER 162
           +  +  A R
Sbjct: 84  IRVAGFARR 92


>gi|124088436|ref|XP_001347100.1| 40S ribosomal protein S9 [Paramecium tetraurelia strain d4-2]
 gi|145474345|ref|XP_001423195.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145505215|ref|XP_001438574.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145507412|ref|XP_001439661.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145544819|ref|XP_001458094.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057489|emb|CAH03473.1| 40S ribosomal protein S9, putative [Paramecium tetraurelia]
 gi|124390255|emb|CAK55797.1| unnamed protein product [Paramecium tetraurelia]
 gi|124405746|emb|CAK71177.1| unnamed protein product [Paramecium tetraurelia]
 gi|124406856|emb|CAK72264.1| unnamed protein product [Paramecium tetraurelia]
 gi|124425913|emb|CAK90697.1| unnamed protein product [Paramecium tetraurelia]
          Length = 186

 Score = 38.4 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%)

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
           F  + ++  +            +E RL T V+++    +I  AR  +  RH  V  R VN
Sbjct: 83  FGLLSEQERKLDYVLGLTTQKMMERRLQTFVFKSNQASSIHHARTLIRQRHFRVGKRLVN 142

Query: 130 IGSYRCKEGDV 140
             S+  +    
Sbjct: 143 SPSFLVRVESE 153


>gi|321259005|ref|XP_003194223.1| 40S ribosomal protein S9-A [Cryptococcus gattii WM276]
 gi|317460694|gb|ADV22436.1| 40S ribosomal protein S9-A [Cryptococcus gattii WM276]
          Length = 192

 Score = 38.4 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     ++  AR  +  RH+ V  + VN+ S+
Sbjct: 103 DFLERRLQTQVFKLGLAKSVHHARVLIRQRHIRVGKQIVNVPSF 146


>gi|283458437|ref|YP_003363061.1| putative rRNA methylase [Rothia mucilaginosa DY-18]
 gi|283134476|dbj|BAI65241.1| predicted rRNA methylase [Rothia mucilaginosa DY-18]
          Length = 242

 Score = 38.4 bits (88), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 23/52 (44%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            RLD  +  A FV +   A + +  R V VNG+     S      D + V+Q
Sbjct: 1   MRLDKYLVEAGFVSSRTLAAKLIAARDVQVNGKVARKASMLVGPEDTLYVRQ 52


>gi|308162918|gb|EFO65285.1| Ribosomal protein S9 [Giardia lamblia P15]
          Length = 189

 Score = 38.0 bits (87), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              +    + RL +++  +K   ++  AR  +  RH+ V G+ VNI SY          +
Sbjct: 100 GLRIEDIFKRRLQSVIVESKLAKSVHHARNMIKARHISVGGQIVNIPSYMV--------R 151

Query: 145 QKSKQLASVLEASQLAERDVP 165
             +    ++ + S LA    P
Sbjct: 152 ISNTSRVAIADTSSLAPNGKP 172


>gi|329765795|ref|ZP_08257361.1| 30S ribosomal protein S4 [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137638|gb|EGG41908.1| 30S ribosomal protein S4 [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 189

 Score = 38.0 bits (87), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             L  RL T+V +     T + ARQ V H H+++  R VNI SY     +   +    + 
Sbjct: 99  DLLSRRLQTLVTKKLGFKTPYQARQAVIHGHIMIGDRKVNIPSYIVTLEEEKNIHFSPES 158

Query: 150 LAS 152
              
Sbjct: 159 KIP 161


>gi|260893252|ref|YP_003239349.1| hemolysin A [Ammonifex degensii KC4]
 gi|260865393|gb|ACX52499.1| hemolysin A [Ammonifex degensii KC4]
          Length = 276

 Score = 38.0 bits (87), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             RLD ++    + P+   ARQ +    VLVNG+            D +EV
Sbjct: 5   RRRLDILLVEQGYFPSRERARQAILAGQVLVNGQRAAKPGRMVGPEDRVEV 55


>gi|328907882|gb|EGG27645.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           sp. P08]
          Length = 245

 Score = 38.0 bits (87), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 4/92 (4%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK---SKQL 150
            RLD  +  A    +   A + V    V VNG  V   + +    D +   ++   S+  
Sbjct: 1   MRLDQALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASDNLVADEEVWVSRAA 60

Query: 151 ASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
             +L A       VP  + ++       F ++
Sbjct: 61  YKLLGALDTLGVSVPSKV-LDAGASTGGFTQV 91


>gi|45657519|ref|YP_001605.1| pseudouridylate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600758|gb|AAS70242.1| pseudouridylate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 246

 Score = 38.0 bits (87), Expect = 0.78,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 17/106 (16%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE--------GD 139
            +  LE RL+  +             + +   H+ +NG+ V     R           GD
Sbjct: 9   FMQHLEIRLNRFLADCGLGS-RRKTEELIQKGHIEINGKRVTNLGTRIDPEIDVVSYLGD 67

Query: 140 VIEVKQKSKQLASVLE--------ASQLAERDVPEYISVNHDNMVA 177
           V++   +SK++    +        A +  E+ +   +  ++ N   
Sbjct: 68  VVKPIVESKKILIFNKPIGYLCSHADRFHEKTIFSLLPSDYKNFKI 113


>gi|134298943|ref|YP_001112439.1| hemolysin A [Desulfotomaculum reducens MI-1]
 gi|134051643|gb|ABO49614.1| hemolysin A [Desulfotomaculum reducens MI-1]
          Length = 268

 Score = 38.0 bits (87), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%)

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           ++  + RLD  +    F P+   AR  V    V V+G  V+   ++ K    I+V+
Sbjct: 1   MAVTKERLDVYLVNNGFFPSREKARAAVMAGLVFVDGERVDKPGHQVKAEVSIQVQ 56


>gi|322805525|emb|CBZ03089.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 400

 Score = 38.0 bits (87), Expect = 0.78,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E  F++IF++      D     ++  E+ +  ++ +AKF P+   AR+ V    V +NG 
Sbjct: 314 EVNFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIIKAKFAPSKNEARRLVKQGAVKINGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            V+     CK  +   ++   K+   +L
Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397


>gi|24214991|ref|NP_712472.1| pseudouridylate synthase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24196034|gb|AAN49490.1| pseudouridylate synthase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 246

 Score = 38.0 bits (87), Expect = 0.78,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 17/106 (16%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE--------GD 139
            +  LE RL+  +             + +   H+ +NG+ V     R           GD
Sbjct: 9   FMQHLEIRLNRFLADCGLGS-RRKTEELIQKGHIEINGKRVTNLGTRIDPEIDVVSYLGD 67

Query: 140 VIEVKQKSKQLASVLE--------ASQLAERDVPEYISVNHDNMVA 177
           V++   +SK++    +        A +  E+ +   +  ++ N   
Sbjct: 68  VVKPIVESKKILIFNKPIGYLCSHADRFHEKTIFSLLPSDYKNFKI 113


>gi|161527832|ref|YP_001581658.1| 30S ribosomal protein S4P [Nitrosopumilus maritimus SCM1]
 gi|254764603|sp|A9A436|RS4_NITMS RecName: Full=30S ribosomal protein S4P
 gi|160339133|gb|ABX12220.1| ribosomal protein S4 [Nitrosopumilus maritimus SCM1]
          Length = 201

 Score = 38.0 bits (87), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             L  RL TIV +     T + ARQ V H H+++  R V+I SY     +   +    + 
Sbjct: 99  DLLSRRLQTIVTKKLGFKTPYQARQAVIHGHIMIGERKVDIPSYTVTVEEENSIHFAPES 158

Query: 150 LASVLEASQLAERDVPE 166
              + +  +  + + P 
Sbjct: 159 --KIPQVLEKTKSEAPA 173


>gi|159112220|ref|XP_001706339.1| Ribosomal protein S9 [Giardia lamblia ATCC 50803]
 gi|157434435|gb|EDO78665.1| Ribosomal protein S9 [Giardia lamblia ATCC 50803]
          Length = 189

 Score = 38.0 bits (87), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              +    + RL +++  +K   ++  AR  +  RH+ V G+ VNI SY          +
Sbjct: 100 GLRIEDIFKRRLQSVIVESKLAKSVHHARNMIKARHISVGGQIVNIPSYMV--------R 151

Query: 145 QKSKQLASVLEASQLAERDVP 165
             +    ++ + S LA    P
Sbjct: 152 ISNTSRVAIADTSSLAPNGKP 172


>gi|320449902|ref|YP_004201998.1| ribosomal RNA large subunit methyltransferase J [Thermus
           scotoductus SA-01]
 gi|320150071|gb|ADW21449.1| ribosomal RNA large subunit methyltransferase J [Thermus
           scotoductus SA-01]
          Length = 244

 Score = 38.0 bits (87), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            RLD  +       +   A++ +    V V G+ V   ++R  EG  +EV    +
Sbjct: 1   MRLDRYLVERGLAESREKAQRLIQSGQVKVAGQVVTKPAHRVPEGAQVEVLSPER 55


>gi|209737034|gb|ACI69386.1| 40S ribosomal protein S9 [Salmo salar]
          Length = 194

 Score = 38.0 bits (87), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             +        +  FLE RL T V++     +I  AR  +  R + V  + VNI S+  +
Sbjct: 91  KMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRRIRVRKQVVNIPSFVVR 150

Query: 137 EGDVIEVKQKSKQ 149
                 +    + 
Sbjct: 151 LDSQKHIDFSLRS 163


>gi|148556441|ref|YP_001264023.1| RNA-binding S4 domain-containing protein [Sphingomonas wittichii
           RW1]
 gi|148501631|gb|ABQ69885.1| RNA-binding S4 domain protein [Sphingomonas wittichii RW1]
          Length = 93

 Score = 38.0 bits (87), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++  +   T   A++     H+ ++GR V+      + G+V+      +     
Sbjct: 1   MRLDKFLWFVRLAKTRTLAQEIAEAGHMRIDGRVVDRAHAAVRIGNVLSFPLHGRVRVIR 60

Query: 154 LEASQLAERDVPE 166
           +EA        PE
Sbjct: 61  IEALPARRGAAPE 73


>gi|269860381|ref|XP_002649912.1| SSU ribosomal protein S4P [Enterocytozoon bieneusi H348]
 gi|220066672|gb|EED44146.1| SSU ribosomal protein S4P [Enterocytozoon bieneusi H348]
          Length = 185

 Score = 38.0 bits (87), Expect = 0.82,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 35/89 (39%)

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             +   +   +  L  +L+ RL ++V ++     I  AR  +  + + + G  VN     
Sbjct: 94  DISKCLKDVLNLELSDYLDRRLQSLVCKSGLARNINHARSLITQKQITIKGNVVNKPGMM 153

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERD 163
            +  +   ++       +  +  + A+++
Sbjct: 154 VRSENEGYIEINPNSCTAGAKKGRYAKKN 182


>gi|294012719|ref|YP_003546179.1| putative RNA-binding protein S4 [Sphingobium japonicum UT26S]
 gi|292676049|dbj|BAI97567.1| putative RNA-binding protein S4 [Sphingobium japonicum UT26S]
          Length = 98

 Score = 38.0 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 83  DTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIE 142
           D           R+D  ++ A+   +   A++     H+ +NGR +       + GD+I 
Sbjct: 3   DAGLVPAHGPSLRIDKFLWFARLAKSRSVAQKMAEDGHIRLNGRRIERSHSPVRAGDLIT 62

Query: 143 VKQKSKQLASVLEASQLAERDVPE 166
               S     V+   QL  R  P 
Sbjct: 63  FPHPSG--VRVVRILQLPGRRGPA 84


>gi|254477059|ref|ZP_05090445.1| RNA-binding S4 [Ruegeria sp. R11]
 gi|214031302|gb|EEB72137.1| RNA-binding S4 [Ruegeria sp. R11]
          Length = 124

 Score = 38.0 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 34/74 (45%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + R+D  +++A+F  T   + + V+  H+ +NG  ++  +     GDV+   Q +     
Sbjct: 7   KIRIDKWLWQARFFKTRSLSSKLVSGGHLRLNGAKISKPAQNVTIGDVLTFPQGNIIRTV 66

Query: 153 VLEASQLAERDVPE 166
            +EA        PE
Sbjct: 67  RVEALGTRRGPAPE 80


>gi|262202727|ref|YP_003273935.1| hemolysin A [Gordonia bronchialis DSM 43247]
 gi|262086074|gb|ACY22042.1| hemolysin A [Gordonia bronchialis DSM 43247]
          Length = 275

 Score = 38.0 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           RLD  + R     +   AR  V+   V VNG      +
Sbjct: 6   RLDAELVRRGLARSREHARHLVDSGVVKVNGVVATKPA 43


>gi|225849740|ref|YP_002729974.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645311|gb|ACO03497.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 410

 Score = 38.0 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 23/59 (38%)

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           L  +V++  F P+   AR+ +    V ++G       +         ++   ++ A + 
Sbjct: 344 LYELVFKTGFAPSKSEARRLIKGGAVKIDGEKFTDPYFEVDLTKEFVLQVGKRKFARIK 402


>gi|295098920|emb|CBK88009.1| tyrosyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 412

 Score = 37.6 bits (86), Expect = 0.92,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE-GDVIEVKQKS 147
           L   +  +    +   AR+++    ++VNG  +    Y        + VK  S
Sbjct: 345 LLETLVESGIASSRREAREWIKGNSIMVNGTKITDPDYMMTPDNHCVCVKNYS 397


>gi|114566130|ref|YP_753284.1| hypothetical protein Swol_0583 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337065|gb|ABI67913.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 270

 Score = 37.6 bits (86), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
               RLD+++Y     P+   AR  +    V VNG+ V+       E   IE+K  
Sbjct: 1   MARIRLDSLLYDKALAPSREKARAMILAGEVRVNGQMVDKPGTTVDEEARIELKSH 56


>gi|301353221|ref|YP_003795218.1| ribosomal protein S4 [Proteromonas lacertae]
 gi|290573169|gb|ADD46356.1| ribosomal protein S4 [Proteromonas lacertae]
          Length = 490

 Score = 37.6 bits (86), Expect = 0.96,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 52  LRAKQKMKKYYGDISEKKFRS-----IFKEADRSRGDTSHNLISFLESRLDTIVYRAKFV 106
           L    K + Y      K+F        F E    R   + N I    +R D ++YR  F 
Sbjct: 72  LGVNVKRQFYSLKFISKQFLKKNSGAYFTERLFRRSLYNTNYIY---NRFDLVLYRTGFA 128

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            ++ +ARQ + H    +N  S+   ++    GD+IE+  K       +
Sbjct: 129 SSLKSARQLILHGFFFINHISIRNPNFLLSCGDLIEINLKKIYFLPFI 176


>gi|51892979|ref|YP_075670.1| putative rRNA methylase [Symbiobacterium thermophilum IAM 14863]
 gi|51856668|dbj|BAD40826.1| putative rRNA methylase [Symbiobacterium thermophilum IAM 14863]
          Length = 257

 Score = 37.6 bits (86), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           RLD  +      P+   A++ +    V VNGR +   + +   GD IEV 
Sbjct: 5   RLDVALVSRGHFPSRERAQEAIAAGMVRVNGRVITKPARKVDPGDAIEVT 54


>gi|256379446|ref|YP_003103106.1| hemolysin A [Actinosynnema mirum DSM 43827]
 gi|255923749|gb|ACU39260.1| hemolysin A [Actinosynnema mirum DSM 43827]
          Length = 268

 Score = 37.6 bits (86), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 17/51 (33%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
           RLD  + R     +   A Q V    V V G      +   +    + V+ 
Sbjct: 6   RLDAELVRRGMARSREHASQLVAEGKVTVRGSVATKPATAVELDTALVVRD 56


>gi|240282216|gb|EER45719.1| 40S ribosomal protein S9 [Ajellomyces capsulatus H143]
 gi|325088355|gb|EGC41665.1| 40S ribosomal protein S9 [Ajellomyces capsulatus H88]
          Length = 191

 Score = 37.6 bits (86), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
            FLE RL T V++     +I  AR  +  RH+ V  + VN+ S+
Sbjct: 101 DFLERRLQTQVHQLGLAKSIHHARVLIKQRHIRVGKQIVNVPSF 144


>gi|255284126|ref|ZP_05348681.1| hemolysin A [Bryantella formatexigens DSM 14469]
 gi|255265300|gb|EET58505.1| hemolysin A [Bryantella formatexigens DSM 14469]
          Length = 284

 Score = 37.6 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
             ++ RLD +V +    P+   A+  +    VLV+G   +       E   I +K
Sbjct: 10  KQMKERLDVLVVQKGLAPSREKAKALIMAGCVLVDGEREDKAGTMFAETVQITLK 64


>gi|11499766|ref|NP_071009.1| hypothetical protein AF2184 [Archaeoglobus fulgidus DSM 4304]
 gi|2648341|gb|AAB89068.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 208

 Score = 37.6 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            RLD ++ R  F  +   A++ +    VLV+G+ V   S        I+V Q  +
Sbjct: 1   MRLDILLVRRGFFSSRSRAKEAIKKGFVLVDGKKVTKPSAEVDFEAEIKVLQPER 55


>gi|161899239|ref|XP_001712846.1| ribosomal protein S9 [Bigelowiella natans]
 gi|75756339|gb|ABA27234.1| ribosomal protein S9 [Bigelowiella natans]
          Length = 180

 Score = 37.6 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150
            L  RL T+V + K   TI  AR  + H+H+ V  + VN  S+  ++ + I +      +
Sbjct: 106 ILSRRLQTVVKQLKLSKTIHEARILIMHKHIQVKNQIVNKPSFLVRKDNEIFISFSLNSI 165

Query: 151 ASVLE 155
              L 
Sbjct: 166 HFNLN 170


>gi|15890001|ref|NP_355682.1| hypothetical protein Atu2752 [Agrobacterium tumefaciens str. C58]
 gi|15157972|gb|AAK88467.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 138

 Score = 37.6 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 33/71 (46%)

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
              +     RLD  ++ A+   +   A+ ++   HV VNG ++   S+  K GD +++  
Sbjct: 5   EQPLESTRQRLDKWLFFARMAKSRSLAQSYIQSGHVKVNGATIRQPSHMLKAGDRLDIGF 64

Query: 146 KSKQLASVLEA 156
           +      V+++
Sbjct: 65  ERMDKVLVVKS 75


>gi|86451906|gb|ABC97348.1| large subunit ribosomal protein 9 RPS9 [Streblomastix strix]
          Length = 188

 Score = 37.6 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%)

Query: 85  SHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              +  F++ RL T+V + K   +I  AR  +   H+ +  + V + SY  +      + 
Sbjct: 95  GLKVQDFMDRRLQTLVLKKKLAKSIHHARLMITQGHIRIGKQIVTVPSYMVRVKSESHID 154

Query: 145 QKSKQ 149
              + 
Sbjct: 155 LSPQS 159


>gi|320093495|ref|ZP_08025392.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979540|gb|EFW11005.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 277

 Score = 37.6 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            RLD+ + R     +   A++ +    V ++G  V   + +      +
Sbjct: 4   RRLDSELVRRGIARSRGHAQELIESGRVRLDGEVVLKPARQMNPAQAV 51


>gi|290462027|gb|ADD24061.1| 40S ribosomal protein S9 [Lepeophtheirus salmonis]
          Length = 190

 Score = 37.6 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 29/66 (43%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            FL+ RL   V+      ++  AR ++ ++ ++VNG  V+   +  +  +   ++   K 
Sbjct: 109 DFLKRRLQNRVFELGLSVSVHQARSYITNKFIMVNGVIVDKPGFIVRMENDGYIELSRKY 168

Query: 150 LASVLE 155
             +   
Sbjct: 169 KKAFRN 174


>gi|163785347|ref|ZP_02179985.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879385|gb|EDP73251.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 278

 Score = 37.6 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 23/59 (38%)

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           L  +VY+  F  +   AR+ +    V +NG      ++         ++   ++ A + 
Sbjct: 213 LYELVYKLGFASSKSEARRLIKSGAVKINGEKFTDFNFEVDLSKEFVLQVGKRKFARIK 271


>gi|207092280|ref|ZP_03240067.1| hemolysin (tly) [Helicobacter pylori HPKX_438_AG0C1]
          Length = 235

 Score = 37.6 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++    V +   A+  V    VLVN   V+  S+  KEGD IE+  +       
Sbjct: 1   MRLDYALFNQHLVSSREKAKALVLENQVLVNKMVVSKPSFIIKEGDKIELIAE------- 53

Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180
                 A   +  ++  +  +     V
Sbjct: 54  KLFVSRAGEKLGAFLETHFVDFKGKVV 80


>gi|99080415|ref|YP_612569.1| RNA-binding S4 [Ruegeria sp. TM1040]
 gi|99036695|gb|ABF63307.1| RNA-binding S4 [Ruegeria sp. TM1040]
          Length = 124

 Score = 37.6 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + R+D  ++ A+F  T   A + V   HV VNG      S     GDV+   Q       
Sbjct: 7   KMRVDKWLWHARFFKTRSLAAKQVGAGHVRVNGSKAAKPSQNVSIGDVLTFPQGH--QVR 64

Query: 153 VLEASQLAERDVPE 166
           V+  + L+ER  P 
Sbjct: 65  VVRITSLSERRGPA 78


>gi|254511389|ref|ZP_05123456.1| RNA-binding S4 [Rhodobacteraceae bacterium KLH11]
 gi|221535100|gb|EEE38088.1| RNA-binding S4 [Rhodobacteraceae bacterium KLH11]
          Length = 121

 Score = 37.2 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           R+D  +++A+F  T   + + V+  HV +NG  V   +     GDV+       ++  V+
Sbjct: 7   RIDKWLWQARFFKTRSLSAKLVSGGHVRLNGNRVLKPAQAVAPGDVLTF--PQGRIVRVV 64

Query: 155 EASQLAERDVPE 166
              +L ER  P 
Sbjct: 65  RIEKLGERRGPA 76


>gi|123447382|ref|XP_001312431.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121894278|gb|EAX99501.1| hypothetical protein TVAG_139990 [Trichomonas vaginalis G3]
          Length = 185

 Score = 37.2 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             ++ RL T V++     ++  AR  V+HRH+ V  + VN  ++  
Sbjct: 101 DLMDRRLQTQVHKCALANSVHHARTLVSHRHISVENQLVNQPAFLV 146


>gi|327404068|ref|YP_004344906.1| hemolysin A [Fluviicola taffensis DSM 16823]
 gi|327319576|gb|AEA44068.1| hemolysin A [Fluviicola taffensis DSM 16823]
          Length = 249

 Score = 37.2 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%)

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            N    +E RLD I++    V +     + + +  VLVNG S+     +      I
Sbjct: 1   MNYFCTMEERLDKILFDRGLVTSRTRGEELIKNGDVLVNGISIEKPGKKIPVDAKI 56


>gi|323702785|ref|ZP_08114445.1| hemolysin A [Desulfotomaculum nigrificans DSM 574]
 gi|323532302|gb|EGB22181.1| hemolysin A [Desulfotomaculum nigrificans DSM 574]
          Length = 268

 Score = 37.2 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           ++  + RLD  +    +  +   AR  V    V V+ R V+   Y  K    ++V+
Sbjct: 1   MAVTKERLDVYLVNHGYFSSREKARAAVMAGLVFVDNRRVDKPGYPVKPDAHVQVQ 56


>gi|302670348|ref|YP_003830308.1| hemolysin TlyA family protein [Butyrivibrio proteoclasticus B316]
 gi|302394821|gb|ADL33726.1| hemolysin TlyA family protein [Butyrivibrio proteoclasticus B316]
          Length = 300

 Score = 37.2 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
           RLD ++      P+   A+  +    V VNG+  +      +E  +  ++ +   L  V
Sbjct: 7   RLDVLLVNRGLAPSREKAKTLIMAGEVFVNGQREDKPGTTFEESKITSLEVRGDTLPYV 65


>gi|84500893|ref|ZP_00999128.1| S4 domain protein [Oceanicola batsensis HTCC2597]
 gi|84390960|gb|EAQ03378.1| S4 domain protein [Oceanicola batsensis HTCC2597]
          Length = 130

 Score = 37.2 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           RLD  +++A+FV +   A   V   HV VNG      S+  + GDV+   Q  +
Sbjct: 9   RLDKWIWQARFVKSRSLAAGLVTGGHVRVNGMRAAKPSHGVQPGDVLTFPQGDR 62


>gi|33863749|ref|NP_895309.1| rRNA methyltransferase [Prochlorococcus marinus str. MIT 9313]
 gi|33635332|emb|CAE21657.1| FtsJ cell division protein:S4 domain:Hemolysin A [Prochlorococcus
           marinus str. MIT 9313]
          Length = 267

 Score = 37.2 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVL-VNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           + RLD  +       +   A+Q +    V   NG+ ++   +   +   ++V+Q  + ++
Sbjct: 4   KQRLDLQLLMKGLASSRHQAQQLIRAGKVRDGNGQLLDKPGHEVSQELELQVEQPPRFVS 63

Query: 152 SVLEASQLAERDVP 165
              E    A R+ P
Sbjct: 64  RGGEKLLGALREFP 77


>gi|323358624|ref|YP_004225020.1| rRNA methylase [Microbacterium testaceum StLB037]
 gi|323274995|dbj|BAJ75140.1| predicted rRNA methylase [Microbacterium testaceum StLB037]
          Length = 265

 Score = 37.2 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK----SKQ 149
           +RLD  +       +   A Q +    V VNGR+V   S       VIEV       S+ 
Sbjct: 2   TRLDAELAARGLARSRSHATQLIAAGEVSVNGRAVVKASAPVDTDSVIEVASPDHYVSRG 61

Query: 150 LASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
              +L A    E DV   ++++       F ++
Sbjct: 62  AHKLLAALDAFEVDVAGRVALDLGASTGGFTQV 94


>gi|170065226|ref|XP_001867852.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Culex
           quinquefasciatus]
 gi|167882304|gb|EDS45687.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Culex
           quinquefasciatus]
          Length = 181

 Score = 37.2 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG--DVIEVKQKS 147
           +F   RL  ++ R+K    I  A Q + H HV V    V   ++       D +     S
Sbjct: 104 TFCRRRLPVVLLRSKMAENISQATQLIEHGHVRVGAEVVKDPAFLVPRTLEDFVTWVDGS 163

Query: 148 KQLASVLEASQL 159
                VLE + +
Sbjct: 164 AIRKHVLEYNDM 175


>gi|312114758|ref|YP_004012354.1| RNA-binding S4 domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219887|gb|ADP71255.1| RNA-binding S4 domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 105

 Score = 37.2 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+FV +   A + +    + VN + V   +   K GDV+           
Sbjct: 6   EQRLDKWLWHARFVKSRSLAAKLIEEGCIRVNRQRVVKAATCIKCGDVLTASLFGD--VR 63

Query: 153 VLEASQLAERDVPE 166
           V+E   + ER  P 
Sbjct: 64  VIEIRGIGERRGPP 77


>gi|149916593|ref|ZP_01905107.1| ATP-dependent DNA ligase [Roseobacter sp. AzwK-3b]
 gi|149809520|gb|EDM69380.1| ATP-dependent DNA ligase [Roseobacter sp. AzwK-3b]
          Length = 113

 Score = 37.2 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%)

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQL 159
           ++ A+F  T   + + V+  HV VN   V+  ++    GDV+   Q S+     + A   
Sbjct: 1   MWHARFFKTRGISAKLVSGGHVRVNSEKVSKPAHAVVPGDVLTFPQASRIRVIRIVAIGE 60

Query: 160 AERDVPE 166
                PE
Sbjct: 61  RRGPAPE 67


>gi|307243246|ref|ZP_07525417.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493374|gb|EFM65356.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus
           stomatis DSM 17678]
          Length = 280

 Score = 37.2 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           ++ R+D ++    F P+   AR+ +   +V V+ + V+      K+   I VK
Sbjct: 1   MKKRIDVLLVDMGFFPSREQARRTIMAGNVFVDNQRVDKPGTMVKDDSEILVK 53


>gi|296127781|ref|YP_003635033.1| hemolysin A [Brachyspira murdochii DSM 12563]
 gi|296019597|gb|ADG72834.1| hemolysin A [Brachyspira murdochii DSM 12563]
          Length = 240

 Score = 37.2 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  VY+  +  +   A+  +    V VNG  V   + + K+ D IEV Q  K ++  
Sbjct: 1   MRLDEYVYKEGYTESRSKAQDIILAGCVFVNGVKVTAKAQKIKDTDNIEVIQNIKYVSRA 60

Query: 154 LEASQLA 160
            +  + A
Sbjct: 61  GDKLEKA 67


>gi|296393973|ref|YP_003658857.1| hemolysin A [Segniliparus rotundus DSM 44985]
 gi|296181120|gb|ADG98026.1| hemolysin A [Segniliparus rotundus DSM 44985]
          Length = 269

 Score = 37.2 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +RLD  + R     +   A   +    V   G+     +    EG  + V
Sbjct: 6   TRLDRELVRRGLARSREQAGSLIAQGRVFAGGKLAKKPACAVSEGTEVRV 55


>gi|49147180|ref|YP_025773.1| ribosomal protein S4 [Pseudendoclonium akinetum]
 gi|33439195|gb|AAQ18732.1| ribosomal protein S4 [Pseudendoclonium akinetum]
          Length = 420

 Score = 37.2 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 80  SRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD 139
           +       +++ LESRLD I+++ +F  +I +ARQ +    VLVNG      S++   GD
Sbjct: 356 AYHRPIPKIVNLLESRLDVILWKNQFAGSIKSARQNLRQG-VLVNGGLQKKTSFQALPGD 414

Query: 140 VIEVKQ 145
           V    +
Sbjct: 415 VFTFNK 420


>gi|153939021|ref|YP_001390553.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934917|gb|ABS40415.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318634|gb|ADF99011.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 400

 Score = 37.2 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E  F++IF++      D     ++  ++ +  ++ +AKF P+   AR+ V    V +NG 
Sbjct: 314 EANFKNIFQQG-NIPEDIDTIKVNLTKTNIVDLIVKAKFAPSKNEARRLVKQGAVKINGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            V+     CK  +   ++   K+   +L
Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397


>gi|222150212|ref|YP_002551169.1| hypothetical protein Avi_4348 [Agrobacterium vitis S4]
 gi|221737194|gb|ACM38157.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 133

 Score = 36.8 bits (84), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 31/69 (44%)

Query: 86  HNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
              ++    R+D  ++ A+   +   A+Q +    V VNG+     S   + GDV+++  
Sbjct: 4   QQPLAGPSQRIDKWLFFARIFKSRTLAQQQIVSGRVRVNGKPGKQPSIIVRPGDVLDITL 63

Query: 146 KSKQLASVL 154
            +  +  V+
Sbjct: 64  PNHDMKLVV 72


>gi|119630155|gb|EAX09750.1| hCG401086, isoform CRA_b [Homo sapiens]
          Length = 168

 Score = 36.8 bits (84), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 10/113 (8%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGD 83
           K  ++ +    G +G + K +       L    K  +    + EK  R +F+        
Sbjct: 22  KPHLDQKLKLIGEYGLQNKCEVWRVKFTLVKIHKAARELLTLDEKDPRRLFE-------- 73

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
                +      L T V++     +I  A   +   H+ V  + VNI  +  +
Sbjct: 74  --GIALLQWLRFLQTQVFKLGLAKSIRHAHVLIQQCHIRVREQVVNILFFTVR 124


>gi|123381003|ref|XP_001298508.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121879096|gb|EAX85578.1| hypothetical protein TVAG_259540 [Trichomonas vaginalis G3]
          Length = 185

 Score = 36.8 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             ++ RL T V++     ++  AR  V+HRH+ V  + VN  ++   +     +K     
Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLVWKESEKNIKSADTS 160


>gi|189485330|ref|YP_001956271.1| putative rRNA methylase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287289|dbj|BAG13810.1| putative rRNA methylase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 250

 Score = 36.8 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
           RLD +++   F  T   A+ F+   ++ VN +          + D IEV+ 
Sbjct: 9   RLDVLLFEKGFAETRTKAQAFIMSGNIFVNNQIQYRPGTLVGKEDSIEVRN 59


>gi|297161628|gb|ADI11340.1| rRNA methylase [Streptomyces bingchenggensis BCW-1]
          Length = 295

 Score = 36.8 bits (84), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           RLD  + R +   +   A Q +    V V G+     + + +    + V+
Sbjct: 10  RLDAELVRRELARSREHAGQLIAAGRVTVGGQVATKPATQVETSAALVVR 59


>gi|90577965|ref|ZP_01233776.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
 gi|90441051|gb|EAS66231.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
          Length = 430

 Score = 36.8 bits (84), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 22/49 (44%)

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           L  ++ ++    +   A+  ++   ++VNG  V+   Y   + D +  +
Sbjct: 365 LQQVLVKSGLASSRGQAKTHISSNAIMVNGEKVSEPFYEFTDADKLFGR 413


>gi|89055801|ref|YP_511252.1| RNA-binding S4 [Jannaschia sp. CCS1]
 gi|88865350|gb|ABD56227.1| heat shock protein Hsp15 [Jannaschia sp. CCS1]
          Length = 108

 Score = 36.8 bits (84), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 31/71 (43%)

Query: 96  LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155
           +D  +++A+F  T   A + V+  HV VN   +   S +   GDV+   Q +      ++
Sbjct: 1   MDKWLWQARFFKTRSLAARQVSAGHVRVNATKITKASTQISPGDVLTFPQGNTIRVVKID 60

Query: 156 ASQLAERDVPE 166
           A        PE
Sbjct: 61  ALAKRRGPAPE 71


>gi|170781652|ref|YP_001709984.1| hypothetical protein CMS_1246 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156220|emb|CAQ01362.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 290

 Score = 36.8 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 5/95 (5%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV-----KQKS 147
           + RLD  +       +   A + +    V V+GR V   S+R   G V+EV         
Sbjct: 23  DLRLDAALPALGLARSRTHAARLIVDGLVTVDGRGVVKASFRVMPGSVVEVAGTDAYVSR 82

Query: 148 KQLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
                +       E +V   ++++       F ++
Sbjct: 83  GAHKLIGALDAFPEVEVAGRLALDVGASTGGFTQV 117


>gi|85713777|ref|ZP_01044767.1| RNA-binding S4 [Nitrobacter sp. Nb-311A]
 gi|85699681|gb|EAQ37548.1| RNA-binding S4 [Nitrobacter sp. Nb-311A]
          Length = 93

 Score = 36.8 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+ V     A   V   HV VNG       +  K  DV+ ++        
Sbjct: 3   RQRLDKWLWHARVVKARTQAAALVEAGHVRVNGTRETSPGHSLKIADVLTIRLDRG--VR 60

Query: 153 VLEASQLAER 162
           +L+ +  AER
Sbjct: 61  ILKVTGFAER 70


>gi|291544840|emb|CBL17949.1| hemolysin TlyA family protein [Ruminococcus sp. 18P13]
          Length = 261

 Score = 36.8 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           +  RLD+ +       +   A++ +    + VNG      S    + D I
Sbjct: 1   MGMRLDSRLVTLGLASSRARAKELICGGQITVNGVPARKASAEVSDSDEI 50


>gi|332187036|ref|ZP_08388777.1| S4 domain protein [Sphingomonas sp. S17]
 gi|332013046|gb|EGI55110.1| S4 domain protein [Sphingomonas sp. S17]
          Length = 107

 Score = 36.8 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 30/74 (40%)

Query: 84  TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           T+    +    RLD  ++ A+   +   A+      H  ++GR+++      + G ++  
Sbjct: 2   TTRAPAALESMRLDRFLWWARIAKSRETAQAMACDGHFRMDGRAIDRAHAPVRIGSILTF 61

Query: 144 KQKSKQLASVLEAS 157
            Q  +     +E+ 
Sbjct: 62  AQHGQVRVLRVESL 75


>gi|163743578|ref|ZP_02150955.1| RNA-binding S4 [Phaeobacter gallaeciensis 2.10]
 gi|161383163|gb|EDQ07555.1| RNA-binding S4 [Phaeobacter gallaeciensis 2.10]
          Length = 123

 Score = 36.8 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           ++   + R+D  +++A+F  T   + + V+  H+ +NG  +   +     GDV+   Q  
Sbjct: 1   MLVSEKIRIDKWLWQARFFKTRSLSAKMVSGGHLSLNGNKIAKPAQNVSSGDVLTFPQGR 60

Query: 148 KQLASVLEASQLAERDVPE 166
                 +EA        PE
Sbjct: 61  IIRTVRIEALGTRRGPAPE 79


>gi|225619185|ref|YP_002720411.1| hemolysin protein [Brachyspira hyodysenteriae WA1]
 gi|1708222|sp|Q06803|HLYA_TREHY RecName: Full=Hemolysin A
 gi|296626|emb|CAA43858.1| hemolysin [Brachyspira hyodysenteriae]
 gi|225214004|gb|ACN82738.1| hemolysin protein [Brachyspira hyodysenteriae WA1]
          Length = 240

 Score = 36.8 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  V+   +  +   A+  +    V VNG  V   +++ K+ D IEV Q  K ++  
Sbjct: 1   MRLDEYVHSEGYTESRSKAQDIILAGCVFVNGVKVTSKAHKIKDTDNIEVVQNIKYVSRA 60

Query: 154 LEASQLA 160
            E  + A
Sbjct: 61  GEKLEKA 67


>gi|330039004|ref|XP_003239760.1| 40S ribosomal protein S9 [Cryptomonas paramecium]
 gi|327206685|gb|AEA38862.1| 40S ribosomal protein S9 [Cryptomonas paramecium]
          Length = 185

 Score = 36.8 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 30/60 (50%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
            FLE RL TIV+++    ++  AR  +  RH+ +  + V + SY  +     ++   S+ 
Sbjct: 103 DFLERRLQTIVFKSHLAKSVHHARTIILQRHISIKDKVVTVPSYLVRVKSQKKISYFSQS 162


>gi|123454657|ref|XP_001315080.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121897746|gb|EAY02857.1| hypothetical protein TVAG_173990 [Trichomonas vaginalis G3]
          Length = 185

 Score = 36.8 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             ++ RL T V++     ++  AR  V+HRH+ V  + VN  ++  
Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 146


>gi|163738511|ref|ZP_02145926.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107]
 gi|161388432|gb|EDQ12786.1| RNA-binding S4 [Phaeobacter gallaeciensis BS107]
          Length = 123

 Score = 36.4 bits (83), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%)

Query: 88  LISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           ++   + R+D  +++A+F  T   + + V+  H+ +NG  +   +     GDV+   Q  
Sbjct: 1   MLVSEKIRIDKWLWQARFFKTRSLSAKMVSGGHLSLNGNKIAKPAQNVSSGDVLTFPQGR 60

Query: 148 KQLASVLEASQLAERDVPE 166
                 +EA        PE
Sbjct: 61  IIRTVRIEALGTRRGPAPE 79


>gi|260654973|ref|ZP_05860461.1| hemolysin A [Jonquetella anthropi E3_33 E1]
 gi|260630288|gb|EEX48482.1| hemolysin A [Jonquetella anthropi E3_33 E1]
          Length = 269

 Score = 36.4 bits (83), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 27/55 (49%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           RLD  + R  F  T   AR  ++   VLV GR+V+    + K    ++V  +S Q
Sbjct: 9   RLDRRLVREHFASTDEEARLLISSGLVLVEGRAVDSPDCQVKPTASVKVIGQSSQ 63


>gi|123397501|ref|XP_001301101.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|123468452|ref|XP_001317444.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121882236|gb|EAX88171.1| hypothetical protein TVAG_041350 [Trichomonas vaginalis G3]
 gi|121900178|gb|EAY05221.1| hypothetical protein TVAG_474000 [Trichomonas vaginalis G3]
          Length = 185

 Score = 36.4 bits (83), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             ++ RL T V++     ++  AR  V+HRH+ V  + VN  ++  
Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 146


>gi|123500006|ref|XP_001327744.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|123509886|ref|XP_001329967.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121910678|gb|EAY15521.1| hypothetical protein TVAG_495360 [Trichomonas vaginalis G3]
 gi|121913018|gb|EAY17832.1| hypothetical protein TVAG_010560 [Trichomonas vaginalis G3]
          Length = 185

 Score = 36.4 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
             ++ RL T V++     ++  AR  V+HRH+ V  + VN  ++  
Sbjct: 101 DLMDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 146


>gi|304321305|ref|YP_003854948.1| Hemolysin HlyA [Parvularcula bermudensis HTCC2503]
 gi|303300207|gb|ADM09806.1| Hemolysin HlyA [Parvularcula bermudensis HTCC2503]
          Length = 243

 Score = 36.4 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK-----SK 148
            RLD+ +  A  V +   A++ +   +V VNG  V       +  D +E + +     S+
Sbjct: 1   MRLDSYLVEAGHVRSRERAKKVIGDGYVWVNGVQVRKAGRSLQPTDRVEFRGEDFAYVSR 60

Query: 149 QLASVLEASQLAERDVPEYISVNHDNMVATFVRI 182
               +L A +    D  + + ++       F ++
Sbjct: 61  AAFKLLAALEAFSFDPQDLLCLDIGASTGGFTQV 94


>gi|15611407|ref|NP_223058.1| putative hemolysin [Helicobacter pylori J99]
 gi|4154865|gb|AAD05917.1| putative hemolysin [Helicobacter pylori J99]
          Length = 235

 Score = 36.4 bits (83), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            RLD  ++      +   A+  V  + VLVN   V+  S+  KEGD IE+
Sbjct: 1   MRLDYALFNQHLANSREKAKALVLKKQVLVNKMVVSKPSFIVKEGDQIEL 50


>gi|226323040|ref|ZP_03798558.1| hypothetical protein COPCOM_00812 [Coprococcus comes ATCC 27758]
 gi|225208607|gb|EEG90961.1| hypothetical protein COPCOM_00812 [Coprococcus comes ATCC 27758]
          Length = 64

 Score = 36.4 bits (83), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKK 60
          M+       K  R +G +         + R        +R   K S +GLQLR KQK K 
Sbjct: 1  MAVNRVPVLKRCRSLGMDPVYLGIDKKSNRQL------KRSNRKMSEYGLQLREKQKAKF 54

Query: 61 YYGDIS 66
           YG + 
Sbjct: 55 IYGVLE 60


>gi|307637053|gb|ADN79503.1| RNA binding methyltransferase [Helicobacter pylori 908]
 gi|325995645|gb|ADZ51050.1| RNA binding methyltransferase [Helicobacter pylori 2018]
 gi|325997241|gb|ADZ49449.1| putative hemolysin [Helicobacter pylori 2017]
          Length = 235

 Score = 36.4 bits (83), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            RLD  ++      +   A+  V  + VLVN   V+  S+  KEGD IE+
Sbjct: 1   MRLDYALFNQHLANSREKAKALVLKKQVLVNKMVVSKPSFIVKEGDQIEL 50


>gi|320011585|gb|ADW06435.1| hemolysin A [Streptomyces flavogriseus ATCC 33331]
          Length = 271

 Score = 36.4 bits (83), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 18/49 (36%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
             RLD  + R K   +   A Q +    V V G +    + + +    +
Sbjct: 6   RRRLDAELVRRKLARSREHASQLIAAGRVTVGGNTATKPATQVETSAAV 54


>gi|291279336|ref|YP_003496171.1| hemolysin A [Deferribacter desulfuricans SSM1]
 gi|290754038|dbj|BAI80415.1| hemolysin A [Deferribacter desulfuricans SSM1]
          Length = 268

 Score = 36.4 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 23/49 (46%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           RLD I+++     +   A++ +    V+VN   ++    +  E   I++
Sbjct: 5   RLDKILFQRGLAESREKAQRLIMAGLVIVNNEKIDKPGTKIDENAHIKL 53


>gi|168178623|ref|ZP_02613287.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670690|gb|EDT82664.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 400

 Score = 36.4 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGR 126
           E  F++IF++      D     ++  E+ +  ++ +AKF P+   AR+ V    V ++G 
Sbjct: 314 EANFKNIFQQG-NIPEDIDTIKVNLTETNIVDLIVKAKFAPSKNEARRLVKQGAVKIDGE 372

Query: 127 SVNIGSYRCKEGDVIEVKQKSKQLASVL 154
            V+     CK  +   ++   K+   +L
Sbjct: 373 KVDE---ECKVKNEDILQVGKKKFIKIL 397


>gi|288931952|ref|YP_003436012.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
 gi|288894200|gb|ADC65737.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
          Length = 208

 Score = 36.4 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 29/61 (47%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  + ++ +  +   A++ +    V VNG+ +   S++ K  + IEV +K K     
Sbjct: 1   MRLDEFLKKSGYFKSRSQAKEAIKRGFVKVNGKVITKPSFQVKGSEKIEVAEKGKPRGYY 60

Query: 154 L 154
            
Sbjct: 61  K 61


>gi|118576780|ref|YP_876523.1| ribosomal protein S4 [Cenarchaeum symbiosum A]
 gi|152060942|sp|A0RY02|RS4_CENSY RecName: Full=30S ribosomal protein S4P
 gi|118195301|gb|ABK78219.1| ribosomal protein S4 [Cenarchaeum symbiosum A]
          Length = 205

 Score = 36.4 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 90  SFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
             L  RL TIV +     T + ARQ V H H+ ++ R V I SY     +  ++K
Sbjct: 99  DLLGRRLQTIVMKKLGFSTPYQARQAVVHGHITISDRVVTIPSYTVYVEEEGDIK 153


>gi|29832783|ref|NP_827417.1| hypothetical protein SAV_6241 [Streptomyces avermitilis MA-4680]
 gi|29609903|dbj|BAC73952.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 212

 Score = 36.4 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           R+D+ ++  + V T           HV VNG  V   +Y  + GD + ++   ++   V+
Sbjct: 46  RIDSWIWSVRLVKTRSMGATACRGGHVRVNGERV-KPAYAVRVGDEVRLRHAGRERILVV 104

Query: 155 EASQLAERDVP 165
           +         P
Sbjct: 105 KRVIRKRVGAP 115


>gi|58040346|ref|YP_192310.1| heat shock protein [Gluconobacter oxydans 621H]
 gi|58002760|gb|AAW61654.1| Heat shock protein [Gluconobacter oxydans 621H]
          Length = 92

 Score = 36.4 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  +Y A+   T       V+   + +N +  +    +   GD++     S     V
Sbjct: 6   QRLDQWLYYARVAKTRPLCAAIVSKGRIRINRQPTSKPHAKLHVGDILTFPAVSGGEVRV 65

Query: 154 LEASQLAERDVPE 166
                L ER  P 
Sbjct: 66  WRVLDLGERRGPA 78


>gi|319949193|ref|ZP_08023282.1| hemolysin A [Dietzia cinnamea P4]
 gi|319437179|gb|EFV92210.1| hemolysin A [Dietzia cinnamea P4]
          Length = 273

 Score = 36.4 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
             RLD  + R K   +   AR  ++   V+VNG +    + + +    I
Sbjct: 5   RMRLDAELVRRKMCDSRERARDLIDSGRVVVNGVAATKPATQVEPTTSI 53


>gi|317013804|gb|ADU81240.1| putative hemolysin [Helicobacter pylori Gambia94/24]
          Length = 235

 Score = 36.4 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            RLD  ++      +   A+  V  + VLVN   V+  S+  KEGD IE+
Sbjct: 1   MRLDYALFNQHLANSREKAKALVLKKQVLVNKMVVSKPSFIIKEGDKIEL 50


>gi|103488217|ref|YP_617778.1| RNA-binding S4 [Sphingopyxis alaskensis RB2256]
 gi|98978294|gb|ABF54445.1| RNA-binding S4 [Sphingopyxis alaskensis RB2256]
          Length = 116

 Score = 36.4 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD +++  +F  +   A+  V   H+ ++GR V+  S   + G  + +    +    V
Sbjct: 10  IRLDKLLWFLRFARSRSIAQAMVAAGHIRLDGRRVSRSSCAVQAGATLVLPVGER--IEV 67

Query: 154 LEASQLAERDVPE 166
           +    L  R  P 
Sbjct: 68  IRLVSLPLRRGPA 80


>gi|328544921|ref|YP_004305030.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum
           SL003B-26A1]
 gi|326414663|gb|ADZ71726.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum
           SL003B-26A1]
          Length = 247

 Score = 36.4 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 20/56 (35%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           + RLD  +      P+   AR  +    V V+GR  +           I +   ++
Sbjct: 4   KKRLDQRLVELGLAPSRARARDAILRGTVTVDGRIADKPGLAVGPSAAIAIDDPAR 59


>gi|86137859|ref|ZP_01056435.1| S4 domain protein [Roseobacter sp. MED193]
 gi|85825451|gb|EAQ45650.1| S4 domain protein [Roseobacter sp. MED193]
          Length = 124

 Score = 36.4 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + R+D  ++ A+F  T   A + V   H+ +NG  +   +     GDV+       +   
Sbjct: 7   KIRVDKWLWHARFFKTRSLAAKQVGAGHIRLNGSKITKTAQNVTAGDVLTF--PQGRQIR 64

Query: 153 VLEASQLAERDVPE 166
           V+E   + ER  P 
Sbjct: 65  VVEVVAIGERRGPA 78


>gi|308184163|ref|YP_003928296.1| Pore-forming cytolysin [Helicobacter pylori SJM180]
 gi|308060083|gb|ADO01979.1| Pore-forming cytolysin [Helicobacter pylori SJM180]
          Length = 235

 Score = 36.4 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 24/50 (48%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            RLD  ++      +   A+  V    VLVN   V+  S+  KEGD IE+
Sbjct: 1   MRLDYALFNQHLANSREKAKALVLKNQVLVNKIVVSKPSFIIKEGDQIEL 50


>gi|148273167|ref|YP_001222728.1| hypothetical protein CMM_1986 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831097|emb|CAN02042.1| unnamed protein product [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 292

 Score = 36.4 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           + RLD  +       +   A + +    V V+GR V   S+R   G V+EV
Sbjct: 25  DLRLDAALPALGLARSRTHAARLIADGLVTVDGRGVVKASFRVMPGSVVEV 75


>gi|308274741|emb|CBX31340.1| Uncharacterized protein yqxC [uncultured Desulfobacterium sp.]
          Length = 250

 Score = 36.4 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           + RLD  V+      +   AR  +    VLVN    +       + D + +K+ 
Sbjct: 5   KKRLDVAVHECGLAQSRQRARSLIMAGKVLVNDNIFDKPGVMISKTDALSLKEP 58


>gi|195953012|ref|YP_002121302.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932624|gb|ACG57324.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 392

 Score = 36.1 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 24/57 (42%)

Query: 100 VYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEA 156
           + +  F  +   AR+ ++   + +NG  +   +      + + V+   K  A + +A
Sbjct: 336 IVKIGFATSNNEARRIISGGGLRINGEKITDPNKEIVVENELRVQVGKKHFAIIKKA 392


>gi|296140085|ref|YP_003647328.1| hemolysin A [Tsukamurella paurometabola DSM 20162]
 gi|296028219|gb|ADG78989.1| hemolysin A [Tsukamurella paurometabola DSM 20162]
          Length = 271

 Score = 36.1 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 20/53 (37%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
           RLD  + R     +   AR+ +    V VN +     + +    D + V   +
Sbjct: 6   RLDAELVRRGMARSREQARELIESGRVTVNKQVARKAANQIDPADPVHVTAVA 58


>gi|222637507|gb|EEE67639.1| hypothetical protein OsJ_25217 [Oryza sativa Japonica Group]
          Length = 125

 Score = 36.1 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVN 129
           F   + +  +             E +L TIV++     +I  AR  +   H+ V  + VN
Sbjct: 6   FYRNYGKTFKKPRRPYEKERLDAELKL-TIVFKNGMAKSIHHARVLIRQHHIRVGRQLVN 64

Query: 130 IGSYRCK 136
           I S+  +
Sbjct: 65  IPSFIVR 71


>gi|326384768|ref|ZP_08206445.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395]
 gi|326196576|gb|EGD53773.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395]
          Length = 300

 Score = 36.1 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGS 132
           RLD  + R     +   AR+ +    V VNG      S
Sbjct: 6   RLDAELVRRGLARSREQARELIEAGSVKVNGTPATKAS 43


>gi|297198950|ref|ZP_06916347.1| ribosome-associated heat shock protein [Streptomyces sviceus ATCC
           29083]
 gi|197711124|gb|EDY55158.1| ribosome-associated heat shock protein [Streptomyces sviceus ATCC
           29083]
          Length = 240

 Score = 36.1 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           R+D+ ++  +   T  A        HV VNG  V   ++  + GD + V+Q+  +   ++
Sbjct: 65  RIDSWIWSVRLAKTRSAGATACRGGHVRVNGERV-KPAHSLRVGDEVRVRQEGWERVVIV 123

Query: 155 EASQLAERDVP 165
           +         P
Sbjct: 124 KRLIRKRVGAP 134


>gi|269926072|ref|YP_003322695.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798]
 gi|269789732|gb|ACZ41873.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798]
          Length = 277

 Score = 36.1 bits (82), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            RLD ++       +   A+  ++   V VNG        R + G  + VK+
Sbjct: 10  IRLDKLMVELGLASSREKAQALISSGLVTVNGEKARSSDQRVRRGTKVIVKE 61


>gi|307294530|ref|ZP_07574372.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1]
 gi|306879004|gb|EFN10222.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1]
          Length = 93

 Score = 36.1 bits (82), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
              R+D  ++ A+   +   A++     H+ +NGR +       + GD+I     S    
Sbjct: 7   PSLRIDKFLWFARLAKSRSVAQKMAEDGHIRLNGRRIERSHSPVRAGDLITFPHPSG--V 64

Query: 152 SVLEASQLAERDVPE 166
            V+   QL  R  P 
Sbjct: 65  RVVRILQLPGRRGPA 79


>gi|94497177|ref|ZP_01303749.1| RNA-binding S4 [Sphingomonas sp. SKA58]
 gi|94423282|gb|EAT08311.1| RNA-binding S4 [Sphingomonas sp. SKA58]
          Length = 98

 Score = 36.1 bits (82), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
              R+D  ++ A+   +   A++     H+ +NGR ++      + GD+I          
Sbjct: 12  PSLRIDKYLWFARLSKSRSIAQKLAEEGHIRLNGRRIDRAHAPVRAGDLITFPHIESVRV 71

Query: 152 SVLEASQLAERDVPE 166
             + A  +     PE
Sbjct: 72  VRVLALPVRRGPAPE 86


>gi|116618583|ref|YP_818954.1| cell division protein [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097430|gb|ABJ62581.1| Cell division protein, S4-like domain [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 265

 Score = 36.1 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 1/81 (1%)

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            D   N +     RLD  V  A F  +   A++ +    V VN   +         GDVI
Sbjct: 176 NDWEENFLLLSSLRLD-TVISAGFDLSRSGAKKLIEENQVRVNWSEIAKPDVELAIGDVI 234

Query: 142 EVKQKSKQLASVLEASQLAER 162
            V++  +    +L+      +
Sbjct: 235 SVRKHGRVQIKLLDGISKKGK 255


>gi|254779055|ref|YP_003057160.1| Pore-forming cytolysin [Helicobacter pylori B38]
 gi|254000966|emb|CAX28910.1| Pore-forming cytolysin [Helicobacter pylori B38]
          Length = 235

 Score = 36.1 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 24/50 (48%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            RLD  ++      +   A+  V    VLVN   V+  S+  KEGD IE+
Sbjct: 1   MRLDYALFNQHLANSREKAKALVLKNQVLVNKMVVSKPSFIVKEGDQIEL 50


>gi|315107243|gb|EFT79219.1| S4 domain protein [Propionibacterium acnes HL030PA1]
 gi|327331109|gb|EGE72849.1| S4 domain protein [Propionibacterium acnes HL097PA1]
          Length = 71

 Score = 36.1 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RL   +  A    T   AR+ +    V VNG+       +   GD + V    +    V
Sbjct: 2   IRLGQYLKFANLAETGGQARELIASGMVSVNGKVETRRGRQLHPGDEVTVTNGGQT---V 58

Query: 154 LEASQLAERDVP 165
                L E DVP
Sbjct: 59  TATVDLTEPDVP 70


>gi|218437902|ref|YP_002376231.1| hemolysin A [Cyanothece sp. PCC 7424]
 gi|218170630|gb|ACK69363.1| hemolysin A [Cyanothece sp. PCC 7424]
          Length = 270

 Score = 36.1 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK---- 146
             + RLD ++       +   A++ +    V VN + ++        G  I+++ K    
Sbjct: 1   MAKQRLDNLLVTLNLCSSRQLAQRLIRAGEVRVNQQIIDKPGTEVDPGAEIQLQAKPLYV 60

Query: 147 SKQLASVLEASQLAERDV 164
           S+    + +A +  +  V
Sbjct: 61  SRGGEKLKKAIEFFKIPV 78


>gi|50842085|ref|YP_055312.1| hypothetical protein PPA0599 [Propionibacterium acnes KPA171202]
 gi|50839687|gb|AAT82354.1| conserved protein [Propionibacterium acnes KPA171202]
          Length = 76

 Score = 36.1 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RL   +  A    T   AR+ +    V VNG+       +   GD + V    +    V
Sbjct: 7   IRLGQYLKFANLAETGGQARELIASGMVSVNGKVETRRGRQLHPGDEVTVTNGGQT---V 63

Query: 154 LEASQLAERDVP 165
                L E DVP
Sbjct: 64  TATVDLTEPDVP 75


>gi|209551387|ref|YP_002283304.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537143|gb|ACI57078.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 134

 Score = 36.1 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             R+D  ++ A+ V +   A+  V   HV VNG      S   K GD IE+  + + +  
Sbjct: 12  RQRIDKWLFFARMVKSRSLAQSHVQSGHVRVNGERCKHPSQMVKPGDRIELTLERRDVVL 71

Query: 153 VL 154
           V+
Sbjct: 72  VM 73


>gi|90422070|ref|YP_530440.1| RNA-binding S4 [Rhodopseudomonas palustris BisB18]
 gi|90104084|gb|ABD86121.1| RNA-binding S4 [Rhodopseudomonas palustris BisB18]
          Length = 89

 Score = 36.1 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 27/71 (38%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+ V    +A   V   HV VNG       +  K GDV+ V         
Sbjct: 3   RQRLDKWLWHARVVKARTSAAALVEAGHVRVNGGRQTAPGHLLKRGDVLTVSLDRTVRLL 62

Query: 153 VLEASQLAERD 163
            +EA      D
Sbjct: 63  KVEAFAARRGD 73


>gi|95929505|ref|ZP_01312248.1| hemolysin A [Desulfuromonas acetoxidans DSM 684]
 gi|95134621|gb|EAT16277.1| hemolysin A [Desulfuromonas acetoxidans DSM 684]
          Length = 250

 Score = 36.1 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%)

Query: 89  ISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           +S  + RLD  V       +   AR  +   +VLVN   ++    R      I V+
Sbjct: 1   MSATKERLDKRVVELGLCRSRERARALIMSGNVLVNETVIDKAGTRVAVDAAIRVR 56


>gi|147677355|ref|YP_001211570.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273452|dbj|BAF59201.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 407

 Score = 36.1 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 70  FRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA----KFVPTIFAARQFVNHRHVLVNG 125
           F+ +F++ D         + + +       + R         +   AR+ +    V ++G
Sbjct: 317 FKRVFQQKDLPDELPGFKVTAGMLEDGAIWLPRLMAMAGLAGSTSEARRLIQQGGVKIDG 376

Query: 126 RSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           R V   +Y  K G  + ++   ++ A ++
Sbjct: 377 RKVEDPNYSLKAGSDMVIQVGKRRFARII 405


>gi|271967338|ref|YP_003341534.1| hemolysin A [Streptosporangium roseum DSM 43021]
 gi|270510513|gb|ACZ88791.1| hemolysin A [Streptosporangium roseum DSM 43021]
          Length = 272

 Score = 36.1 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            +RLD+ + R K   +   A Q +    V V G+     + +      I
Sbjct: 4   RTRLDSELVRRKLARSREQAAQLIEAGRVSVGGQLAAKPATQVDTASAI 52


>gi|225849728|ref|YP_002729962.1| hemolysin A [Persephonella marina EX-H1]
 gi|225646217|gb|ACO04403.1| hemolysin A [Persephonella marina EX-H1]
          Length = 272

 Score = 36.1 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           R+D ++     V +   A++ +    V VN + V+    +      I +K+K K
Sbjct: 6   RIDKLLVERGLVESREKAQRLIMAGCVFVNDQRVDKPGTKIPVDANIFLKEKEK 59


>gi|160948202|emb|CAO94702.1| putative ribosomal protein S9 [Pomphorhynchus laevis]
          Length = 174

 Score = 36.1 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 21/153 (13%)

Query: 18  NLWGRPKSPVNTRSYGP-----GLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRS 72
            ++  P+ P             G +G R K +       L   +K  +    + EK  R 
Sbjct: 8   KVYTTPRRPFEKERLDQELRLVGEYGLRNKKELWRVKFALAHIRKTARILLTLEEKDPRR 67

Query: 73  IFK----------------EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           +F+                   +     S     FL  RL T+V +     +I  AR  +
Sbjct: 68  LFQGNALLRRLVRMGILDENRMKLDYVLSLKPQDFLNRRLQTLVLQRGLAKSIHHARVLI 127

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
             RH+ V  + VN+ S+  +      +    + 
Sbjct: 128 RQRHIRVRKQVVNVPSFIVRIDSEKHIDLSLRS 160


>gi|239978725|ref|ZP_04701249.1| putative rRNA methylase [Streptomyces albus J1074]
          Length = 268

 Score = 35.7 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 16/44 (36%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
               RLD  + R K   +   A Q +    V V G +    + +
Sbjct: 1   MARRRLDAELVRRKLARSREHASQLIAAGRVTVGGATATKPATQ 44


>gi|258654197|ref|YP_003203353.1| hemolysin A [Nakamurella multipartita DSM 44233]
 gi|258557422|gb|ACV80364.1| hemolysin A [Nakamurella multipartita DSM 44233]
          Length = 272

 Score = 35.7 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
            SRLD  + R     +   A +F+    VLV G+     S        + V+ 
Sbjct: 3   RSRLDAELVRRGHARSRAEAAEFIAAGRVLVAGQVATKPSTAVDPAVALLVRD 55


>gi|86747675|ref|YP_484171.1| RNA-binding S4 [Rhodopseudomonas palustris HaA2]
 gi|86570703|gb|ABD05260.1| RNA-binding S4 [Rhodopseudomonas palustris HaA2]
          Length = 89

 Score = 35.7 bits (81), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+ V     A   V   HV VNG       +  K GDV+ +     +   
Sbjct: 3   RQRLDKWLWHARIVRARSTAAALVESGHVRVNGVREKSPGHGIKTGDVVTIALD--RSVR 60

Query: 153 VLEASQLAER 162
           VL+    AER
Sbjct: 61  VLKVIGFAER 70


>gi|16804067|ref|NP_465552.1| hypothetical protein lmo2028 [Listeria monocytogenes EGD-e]
 gi|224501171|ref|ZP_03669478.1| hypothetical protein LmonFR_01400 [Listeria monocytogenes FSL
           R2-561]
 gi|254827084|ref|ZP_05231771.1| S4 domain-containing protein [Listeria monocytogenes FSL N3-165]
 gi|254831730|ref|ZP_05236385.1| hypothetical protein Lmon1_10263 [Listeria monocytogenes 10403S]
 gi|255016669|ref|ZP_05288795.1| hypothetical protein LmonF_00281 [Listeria monocytogenes FSL
           F2-515]
 gi|255026556|ref|ZP_05298542.1| hypothetical protein LmonocytFSL_09855 [Listeria monocytogenes FSL
           J2-003]
 gi|16411498|emb|CAD00106.1| lmo2028 [Listeria monocytogenes EGD-e]
 gi|258599467|gb|EEW12792.1| S4 domain-containing protein [Listeria monocytogenes FSL N3-165]
          Length = 258

 Score = 35.7 bits (81), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E +  +                ++    RLD I+  A 
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETELTNAVYAP----VIWEEMGLTVSSMRLDVIISNAH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|123431013|ref|XP_001308019.1| S4 domain containing protein [Trichomonas vaginalis G3]
 gi|121889677|gb|EAX95089.1| S4 domain containing protein [Trichomonas vaginalis G3]
          Length = 83

 Score = 35.7 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
           ++ RL T V++     ++  AR  V+HRH+ V  + VN  ++  
Sbjct: 1   MDRRLQTQVHKRALANSVHHARTLVSHRHISVENQLVNQPAFLV 44


>gi|227431973|ref|ZP_03913993.1| ribosomal protein S4e [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352258|gb|EEJ42464.1| ribosomal protein S4e [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 265

 Score = 35.7 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 1/81 (1%)

Query: 82  GDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
            D   N +     RLD  V  A F  +   A++ +    V VN   +         GDVI
Sbjct: 176 NDWEENFLLLSSLRLD-TVISAGFDLSRSGAKKLIEENQVRVNWSEIVKPDAELAIGDVI 234

Query: 142 EVKQKSKQLASVLEASQLAER 162
            V++  +    +L+      +
Sbjct: 235 SVRKHGRVQIKLLDGISKKGK 255


>gi|284802475|ref|YP_003414340.1| hypothetical protein LM5578_2231 [Listeria monocytogenes 08-5578]
 gi|284995617|ref|YP_003417385.1| hypothetical protein LM5923_2182 [Listeria monocytogenes 08-5923]
 gi|284058037|gb|ADB68978.1| hypothetical protein LM5578_2231 [Listeria monocytogenes 08-5578]
 gi|284061084|gb|ADB72023.1| hypothetical protein LM5923_2182 [Listeria monocytogenes 08-5923]
          Length = 259

 Score = 35.7 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E +  +                ++    RLD I+  A 
Sbjct: 141 KDYLTLQLEKIGKVNVM---LEETELTNAVYAP----VIWEEMGLTVSSMRLDVIISNAH 193

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 194 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 236


>gi|89069368|ref|ZP_01156727.1| S4 domain protein [Oceanicola granulosus HTCC2516]
 gi|89045135|gb|EAR51206.1| S4 domain protein [Oceanicola granulosus HTCC2516]
          Length = 128

 Score = 35.7 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  +++A+F  +   A + V +  V V+G+ V+  +     GDV+   Q        
Sbjct: 8   IRLDKWLWQARFFKSRSLAAEIVGNGRVRVDGQPVSKPARAVGAGDVLTFPQGQAVRVVR 67

Query: 154 LEASQLAERDVPE 166
           + A        PE
Sbjct: 68  ILALGTRRGPAPE 80


>gi|329895164|ref|ZP_08270848.1| Ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit [gamma proteobacterium IMCC3088]
 gi|328922478|gb|EGG29819.1| Ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit [gamma proteobacterium IMCC3088]
          Length = 130

 Score = 35.7 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD  ++ A+F  T    +Q +    V VNG+ V + S     GD I V+Q       V+
Sbjct: 5   RLDKWLWAARFYKTRSLCKQAIEGGKVHVNGQRVKV-SKDVIVGDEIRVRQGYDDRDIVV 63

Query: 155 EASQLAERDVPE 166
            A     +  PE
Sbjct: 64  LALSDQRKGAPE 75


>gi|307328948|ref|ZP_07608117.1| hemolysin A [Streptomyces violaceusniger Tu 4113]
 gi|306885458|gb|EFN16475.1| hemolysin A [Streptomyces violaceusniger Tu 4113]
          Length = 303

 Score = 35.7 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 17/47 (36%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
           RLD  + R K   +   A Q +    V V G      + + +    +
Sbjct: 10  RLDAELVRRKLARSREHASQLIAAGRVTVGGAVATKPATQVETSAAV 56


>gi|300869762|ref|YP_003784633.1| hemolysin A [Brachyspira pilosicoli 95/1000]
 gi|300687461|gb|ADK30132.1| hemolysin A [Brachyspira pilosicoli 95/1000]
          Length = 240

 Score = 35.7 bits (81), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  V+   +  +   A+  +    V VNG  V   + + K+ D IEV Q  K ++  
Sbjct: 1   MRLDEYVHHNGYTESRSKAQDIILAGCVFVNGVKVTSKAQKIKDTDKIEVIQNRKYVSRA 60

Query: 154 LEASQLA 160
            E  + A
Sbjct: 61  GEKLEKA 67


>gi|292492716|ref|YP_003528155.1| RNA-binding S4 domain protein [Nitrosococcus halophilus Nc4]
 gi|291581311|gb|ADE15768.1| RNA-binding S4 domain protein [Nitrosococcus halophilus Nc4]
          Length = 131

 Score = 35.7 bits (81), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + RLD  ++ A+F  T   A + VN   V +NGR V   S R   GD + +++   +   
Sbjct: 8   KIRLDKWLWAARFFKTRSLAVEAVNGGKVHLNGRRV-KPSQRVAIGDHLTIRRGQFEYEI 66

Query: 153 VLEASQLAERDVPE 166
            +E      R  PE
Sbjct: 67  TIEGLSQQRRPAPE 80


>gi|186685337|ref|YP_001868533.1| hemolysin A [Nostoc punctiforme PCC 73102]
 gi|186467789|gb|ACC83590.1| hemolysin A [Nostoc punctiforme PCC 73102]
          Length = 272

 Score = 35.7 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
             + RLDT++       +   A++ +    V VN + V+           I +K++S
Sbjct: 1   MAKQRLDTLLVELNLCSSRALAQRLIQAGEVTVNQQLVDKPGTEVDISAQINIKERS 57


>gi|322800724|gb|EFZ21628.1| hypothetical protein SINV_05339 [Solenopsis invicta]
          Length = 752

 Score = 35.7 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 10/175 (5%)

Query: 34  PGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLE 93
           P    +  ++  +++ +Q   ++    ++    E KF +  K+       T    +  L 
Sbjct: 538 PQQLEKSIQAFETFYHMQFSGRKLTWLHHLSQGELKF-NYLKKPYLVTVQTYQMALLLLF 596

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
              D I  +        +  Q V H   LV+ + +N  +    E D I     S      
Sbjct: 597 EHCDAIPCKEAAASLRLSHDQLVKHAASLVDCKILNKSNDGELEEDTILTLNFSYSNKRT 656

Query: 154 L-EASQLAERDVP-----EYISVNHDN---MVATFVRIPSSLKDVPYPVIMQPNL 199
               + + +RD P      + SV+ D    + A  VRI  S K + +  ++Q  L
Sbjct: 657 KFRVTGVLQRDAPQDAEATHRSVDEDRKMFLQAAIVRIMKSRKLLRHNQLIQEVL 711


>gi|85712731|ref|ZP_01043776.1| Ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit [Idiomarina baltica OS145]
 gi|85693463|gb|EAQ31416.1| Ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit [Idiomarina baltica OS145]
          Length = 131

 Score = 35.7 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD  ++ A+F  T   ARQ V    V V G+  +  S   + GD I ++Q        +
Sbjct: 8   RLDKWLWAARFYKTRALARQMVQSGKVHVAGKR-SKPSKLVQIGDRITLRQGFDSKEVEV 66

Query: 155 EASQLAERDVPE 166
                  R  PE
Sbjct: 67  LGLSEQRRGAPE 78


>gi|328952109|ref|YP_004369443.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452433|gb|AEB08262.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 406

 Score = 35.7 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 41/107 (38%), Gaps = 6/107 (5%)

Query: 52  LRAKQKMKKYYGDISE---KKFRSIFKEADRSRGDTSHNLISFLESR--LDTIVYRAKFV 106
           L  +   + +    +E   ++F ++F+E      +     ++  E+   L  ++++A   
Sbjct: 295 LAKEMVARYHSPGAAEEAARQFAAVFREGA-LPEEIEEICLAVTENSIWLPKVLHQAGLA 353

Query: 107 PTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
                AR+ +    V V+G  V+        G    ++   ++   V
Sbjct: 354 AGTSEARRLIQQGGVQVDGEKVSSVELELPVGQTYLLRVGKRKFKKV 400


>gi|300741214|ref|ZP_07071235.1| ribosomal RNA large subunit methyltransferase J [Rothia
           dentocariosa M567]
 gi|300380399|gb|EFJ76961.1| ribosomal RNA large subunit methyltransferase J [Rothia
           dentocariosa M567]
          Length = 244

 Score = 35.7 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  +       +   A + ++   V VNG+ V   S      D + V++        
Sbjct: 1   MRLDKFLAEHGLAASRTLAAKLIDAGCVSVNGKIVYKASQPVHRDDDVLVQESPLTEYVS 60

Query: 154 LEASQLAER-DVPEYISV 170
               +LA   D+  +I+V
Sbjct: 61  RAGHKLAGALDIFTHITV 78


>gi|237785442|ref|YP_002906147.1| hypothetical protein ckrop_0850 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758354|gb|ACR17604.1| hypothetical protein ckrop_0850 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 276

 Score = 35.7 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 18/46 (39%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG 138
             RLD  +   K   +   A + +    V+VNG      + R + G
Sbjct: 7   RRRLDAELVNRKVARSRDQAVEMIRSGRVMVNGFQATKPATRVEPG 52


>gi|169334432|ref|ZP_02861625.1| hypothetical protein ANASTE_00832 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259149|gb|EDS73115.1| hypothetical protein ANASTE_00832 [Anaerofustis stercorihominis DSM
           17244]
          Length = 267

 Score = 35.7 bits (81), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146
           RLD +++ +    +   A++ +    V VN + V+    +      I +K  
Sbjct: 6   RLDVLLFESGMAESREKAKRLIMAGVVFVNDQRVDKAGTKVDIYSNIIIKGN 57


>gi|170750105|ref|YP_001756365.1| RNA-binding S4 domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656627|gb|ACB25682.1| RNA-binding S4 domain protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 102

 Score = 35.7 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 28/74 (37%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+F  T   A +  +   V VNG      +     GDV+ V      LA 
Sbjct: 5   RQRLDKWLWFARFARTRSLAARLASDGFVRVNGSRAENPAKAIGVGDVVTVAAPHATLAV 64

Query: 153 VLEASQLAERDVPE 166
            +    L     PE
Sbjct: 65  RVLGLGLRRGPAPE 78


>gi|303389425|ref|XP_003072945.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303302088|gb|ADM11585.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 180

 Score = 35.7 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 76  EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRC 135
           +  +    T   + SF E RL  ++ R + VP    A +FV H HV +  + V   S   
Sbjct: 88  KNRKLVDCTKVTVSSFCERRLPMVMKRIRMVPNFKDATRFVEHGHVRLGSKVVYDPSTII 147

Query: 136 KEGDV--IEVKQKSKQLASVLEASQLAE 161
            +     +    +SK    + E + +A+
Sbjct: 148 SKAMEDFVSWVDESKIKKKIDEFNGVAD 175


>gi|116254343|ref|YP_770181.1| heat shock protein 15 [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258991|emb|CAK10100.1| putative heat shock protein 15 [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 134

 Score = 35.7 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             R+D  ++ A+   +   A+  +   HV +NG   +  S   K GD IE+  + + +  
Sbjct: 12  RQRIDKWLFFARMAKSRSVAQSHIQSGHVRINGERCSYPSQMVKPGDRIELTLERRDVVL 71

Query: 153 VL 154
           V+
Sbjct: 72  VV 73


>gi|291450616|ref|ZP_06590006.1| rRNA methylase [Streptomyces albus J1074]
 gi|291353565|gb|EFE80467.1| rRNA methylase [Streptomyces albus J1074]
          Length = 271

 Score = 35.7 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
             RLD  + R K   +   A Q +    V V G +    + +
Sbjct: 6   RRRLDAELVRRKLARSREHASQLIAAGRVTVGGATATKPATQ 47


>gi|323341676|ref|ZP_08081909.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464101|gb|EFY09294.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 420

 Score = 35.7 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 63  GDISE---KKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
           G++ E   ++ R +F ++         N++          +   K  P+   ARQ +   
Sbjct: 326 GNVQELTVEQIRQVFADSASIEVSADENIVEL--------LVNTKVCPSKREARQLIEGG 377

Query: 120 HVLVNGRSVNIGSYRCKEGDVI 141
            + VNG  VN   +   + + I
Sbjct: 378 AIRVNGEVVNDTDFVISKDNAI 399


>gi|256846979|ref|ZP_05552425.1| RNA-binding S4 domain-containing protein [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715643|gb|EEU30618.1| RNA-binding S4 domain-containing protein [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 261

 Score = 35.7 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 69  KFRSIFK-EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRS 127
           +F  I + +      D     I+    RLD ++  A F  +   A+  + H  V VN   
Sbjct: 158 QFERISQDKLVLPDDDWEKVSITVPSLRLDAVIANA-FNYSRNRAKAAIEHGLVRVNWEE 216

Query: 128 VNIGSYRCKEGDVIEVKQKSK 148
           ++   Y+    D+I V+   +
Sbjct: 217 IDRPDYQMAIHDLISVRHGGR 237


>gi|302533667|ref|ZP_07286009.1| rRNA methylase [Streptomyces sp. C]
 gi|302442562|gb|EFL14378.1| rRNA methylase [Streptomyces sp. C]
          Length = 271

 Score = 35.3 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 17/49 (34%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
             RLD  + R     +   A Q +    V V G +    + + +    +
Sbjct: 6   RRRLDAELVRRSMARSREHAAQLIAAGRVTVGGTTATKPATQVETSAAL 54


>gi|153828323|ref|ZP_01980990.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148876153|gb|EDL74288.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 127

 Score = 35.3 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 9   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 67

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 68  IIEKISDQRRGAPE 81


>gi|189342242|gb|ACD91700.1| ribosomal protein S4 [Cousinia macilenta]
          Length = 45

 Score = 35.3 bits (80), Expect = 4.7,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 9/26 (34%)

Query: 1  MSKRESSKHKIDRRIGENLWGRPKSP 26
          MS+    + K    +G       K P
Sbjct: 1  MSRYRGPRFKKIXHLGALPGLSNKRP 26


>gi|284161758|ref|YP_003400381.1| RNA-binding S4 domain protein [Archaeoglobus profundus DSM 5631]
 gi|284011755|gb|ADB57708.1| RNA-binding S4 domain protein [Archaeoglobus profundus DSM 5631]
          Length = 209

 Score = 35.3 bits (80), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            RLD ++    +  +   A++ +  R V+VNG+ V   SY       I V Q+ K
Sbjct: 1   MRLDRLLVIKGYFSSRQKAKEAIRRRFVIVNGKVVTKPSYDVDFDVEIRVLQEEK 55


>gi|1086212|pir||S51055 ribosomal protein S4 - Thermus aquaticus (fragment)
          Length = 26

 Score = 35.3 bits (80), Expect = 4.7,   Method: Composition-based stats.
 Identities = 4/21 (19%), Positives = 9/21 (42%)

Query: 3  KRESSKHKIDRRIGENLWGRP 23
          +      ++ RR G  L+ + 
Sbjct: 2  RYIGPVCRLSRREGVKLYLKG 22


>gi|327485203|gb|AEA79610.1| Ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit (S4 paralog) [Vibrio cholerae
           LMA3894-4]
          Length = 125

 Score = 35.3 bits (80), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 7   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 65

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 66  IIEKISDQRRGAPE 79


>gi|296133365|ref|YP_003640612.1| tyrosyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031943|gb|ADG82711.1| tyrosyl-tRNA synthetase [Thermincola potens JR]
          Length = 407

 Score = 35.3 bits (80), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 67  EKKFRSIFKEADRSRGDTSH----NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
           E++F+SIF++ +       +    N +   E  L  ++  A  V +    R+ V    V 
Sbjct: 315 EEEFKSIFQKKELPDEIPEYVLDKNQLEEGEIWLPKLMALAGLVSSSSEGRRLVIQGGVR 374

Query: 123 VNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           VN + V   + + +  + + +K   ++   ++
Sbjct: 375 VNDKKVVDPAAKVQPENGMIIKAGKRKFVKIV 406


>gi|117926972|ref|YP_867589.1| RNA-binding S4 domain-containing protein [Magnetococcus sp. MC-1]
 gi|117610728|gb|ABK46183.1| heat shock protein Hsp15 [Magnetococcus sp. MC-1]
          Length = 130

 Score = 35.3 bits (80), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           R+D  ++ A+F  T   A   VN  HV +NG+ +   S++ K GD +E+ +   Q A V+
Sbjct: 10  RIDKWLWAARFFKTRALATDAVNGGHVHLNGQRI-KASHQVKVGDRLEITKGPVQFALVI 68

Query: 155 EASQLAERDVPE 166
           E         P 
Sbjct: 69  EGLHDKRGPAPA 80


>gi|326565308|gb|ADZ95652.1| 40S ribosomal protein S9 [Nosema bombycis]
          Length = 187

 Score = 35.3 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
           LE  L   VY      ++  AR  +  + + + G  VN  +   K  +   +
Sbjct: 110 LERTLQFRVYANGLGKSVHHARWLIKRKQISIKGVVVNTPNRIIKAEEEAFI 161


>gi|237668428|ref|ZP_04528412.1| hemolysin A [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237656776|gb|EEP54332.1| hemolysin A [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 270

 Score = 35.3 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD ++     + +   A+  +    V VNG+ V+    +      IE +     L  V 
Sbjct: 7   RLDILLVEKGIITSREKAKACIMEGRVYVNGQKVDKAGEKVGVDSDIEYRGD--TLKYVS 64

Query: 155 EASQLAERDVPEY-ISVNHD 173
                 E+ +  + ++++  
Sbjct: 65  RGGLKLEKAMATWDLTLDDK 84


>gi|325295697|ref|YP_004282211.1| hemolysin A [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325066145|gb|ADY74152.1| hemolysin A [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 265

 Score = 35.3 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
           RLD ++     V +   A+  +    VLVNG+ V+          VIE+K
Sbjct: 6   RLDKLLVEKGLVKSRERAKALIMAGKVLVNGQVVDKAGASVLPDAVIEIK 55


>gi|291542895|emb|CBL16005.1| hemolysin TlyA family protein [Ruminococcus bromii L2-63]
          Length = 268

 Score = 35.3 bits (80), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           ++ RLD +VY   F  +   A+  +    V V+ +  +       E   IEV+  +++
Sbjct: 1   MKKRLDILVYEKGFTDSREKAKAIIMSGQVYVDNQKADKCGTSYDENVKIEVRGNTQK 58


>gi|313905341|ref|ZP_07838707.1| hemolysin A [Eubacterium cellulosolvens 6]
 gi|313469811|gb|EFR65147.1| hemolysin A [Eubacterium cellulosolvens 6]
          Length = 298

 Score = 35.3 bits (80), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQL 150
             + RLD +V      P+   A+  +    V V+G+  +       E   I +KQ  K+L
Sbjct: 1   MAKKRLDVLVTERGLAPSREKAKLIIMAGEVFVDGQREDKAGMTFPETAEITLKQSKKEL 60

Query: 151 ASVL 154
              +
Sbjct: 61  FPFV 64


>gi|217967433|ref|YP_002352939.1| hemolysin A [Dictyoglomus turgidum DSM 6724]
 gi|217336532|gb|ACK42325.1| hemolysin A [Dictyoglomus turgidum DSM 6724]
          Length = 271

 Score = 35.3 bits (80), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK----SKQL 150
           RLD ++ +  F  +   AR  V    V VNG  V     +     +IE+K+     SK  
Sbjct: 6   RLDVLLVKRGFFESREKARAAVIAGIVKVNGNVVIKPDLKIPIDSLIEIKENIPYVSKGG 65

Query: 151 ASVLEASQLAERDVPEYISVNHDNMVATFV 180
             + +A    E DV   I+V+       F 
Sbjct: 66  FKLKKAIDTFEVDVKGKIAVDIGASTGGFT 95


>gi|15642728|ref|NP_232361.1| hypothetical protein VC2735 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586607|ref|ZP_01676392.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121726734|ref|ZP_01679959.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|153802922|ref|ZP_01957508.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153817443|ref|ZP_01970110.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821284|ref|ZP_01973951.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227082849|ref|YP_002811400.1| Heat shock protein 15 [Vibrio cholerae M66-2]
 gi|229507217|ref|ZP_04396722.1| ribosome-associated heat shock protein [Vibrio cholerae BX 330286]
 gi|229509862|ref|ZP_04399343.1| ribosome-associated heat shock protein [Vibrio cholerae B33]
 gi|229516983|ref|ZP_04406429.1| ribosome-associated heat shock protein [Vibrio cholerae RC9]
 gi|229606723|ref|YP_002877371.1| ribosome-associated heat shock protein [Vibrio cholerae MJ-1236]
 gi|254285930|ref|ZP_04960892.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254851272|ref|ZP_05240622.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|298500450|ref|ZP_07010254.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657333|gb|AAF95874.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549166|gb|EAX59199.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630895|gb|EAX63277.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124121535|gb|EAY40278.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126512029|gb|EAZ74623.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126521216|gb|EAZ78439.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|150424112|gb|EDN16051.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227010737|gb|ACP06949.1| Heat shock protein 15 [Vibrio cholerae M66-2]
 gi|229346046|gb|EEO11018.1| ribosome-associated heat shock protein [Vibrio cholerae RC9]
 gi|229353336|gb|EEO18275.1| ribosome-associated heat shock protein [Vibrio cholerae B33]
 gi|229354722|gb|EEO19643.1| ribosome-associated heat shock protein [Vibrio cholerae BX 330286]
 gi|229369378|gb|ACQ59801.1| ribosome-associated heat shock protein [Vibrio cholerae MJ-1236]
 gi|254846977|gb|EET25391.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297540619|gb|EFH76676.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 127

 Score = 35.3 bits (80), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 9   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 67

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 68  IIEKISDQRRGAPE 81


>gi|254854035|ref|ZP_05243383.1| S4 domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|300765463|ref|ZP_07075444.1| hypothetical protein LMHG_12332 [Listeria monocytogenes FSL N1-017]
 gi|258607427|gb|EEW20035.1| S4 domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|300513774|gb|EFK40840.1| hypothetical protein LMHG_12332 [Listeria monocytogenes FSL N1-017]
          Length = 258

 Score = 35.3 bits (80), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +                ++    RLD I+  A 
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|217963827|ref|YP_002349505.1| S4 domain protein [Listeria monocytogenes HCC23]
 gi|217333097|gb|ACK38891.1| S4 domain protein [Listeria monocytogenes HCC23]
 gi|307571602|emb|CAR84781.1| RNA-binding S4 domain protein [Listeria monocytogenes L99]
          Length = 259

 Score = 35.3 bits (80), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +                ++    RLD I+  A 
Sbjct: 141 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 193

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 194 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 236


>gi|46908264|ref|YP_014653.1| S4 domain-containing protein [Listeria monocytogenes str. 4b F2365]
 gi|47094010|ref|ZP_00231742.1| S4 domain protein [Listeria monocytogenes str. 4b H7858]
 gi|224498521|ref|ZP_03666870.1| S4 domain protein [Listeria monocytogenes Finland 1988]
 gi|254826216|ref|ZP_05231217.1| S4 domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|254933456|ref|ZP_05266815.1| S4 domain-containing protein [Listeria monocytogenes HPB2262]
 gi|254992791|ref|ZP_05274981.1| S4 domain protein [Listeria monocytogenes FSL J2-064]
 gi|255522100|ref|ZP_05389337.1| S4 domain protein [Listeria monocytogenes FSL J1-175]
 gi|46881535|gb|AAT04830.1| S4 domain protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|47017615|gb|EAL08416.1| S4 domain protein [Listeria monocytogenes str. 4b H7858]
 gi|293585017|gb|EFF97049.1| S4 domain-containing protein [Listeria monocytogenes HPB2262]
 gi|293595457|gb|EFG03218.1| S4 domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|328466091|gb|EGF37261.1| S4 domain protein [Listeria monocytogenes 1816]
 gi|328472677|gb|EGF43535.1| S4 domain protein [Listeria monocytogenes 220]
          Length = 258

 Score = 35.3 bits (80), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +                ++    RLD I+  A 
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|254385883|ref|ZP_05001202.1| rRNA methylase [Streptomyces sp. Mg1]
 gi|194344747|gb|EDX25713.1| rRNA methylase [Streptomyces sp. Mg1]
          Length = 271

 Score = 35.3 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 17/49 (34%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVI 141
             RLD  + R     +   A Q +    V V G +    + + +    +
Sbjct: 6   RRRLDAELVRRSMARSREHAAQLIAAGRVTVGGATATKPATQVETSAAL 54


>gi|317009006|gb|ADU79586.1| hemolysin [Helicobacter pylori India7]
          Length = 235

 Score = 35.3 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++    V +   A+  V    VLVN   V+  S+  KE D I       +L + 
Sbjct: 1   MRLDYALFSQHLVSSREKAKALVLKNQVLVNKMVVSKPSFIIKEDDKI-------ELIAT 53

Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180
                 A   +  ++  +  +     V
Sbjct: 54  NLFISRAGEKLGAFLETHFVDFKGKVV 80


>gi|291221253|ref|XP_002730636.1| PREDICTED: hypothetical protein, partial [Saccoglossus kowalevskii]
          Length = 507

 Score = 35.3 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 54  AKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAAR 113
            K K +  +G   +++FR +  +  + +          LE+ LD   ++  FV   F  R
Sbjct: 372 EKIKQRALFGLFDKQQFRRLMSDNGKGKVYIG----VSLETCLDKCYFQKTFVCKSFDYR 427

Query: 114 QFVNHRHVL 122
           Q V+   + 
Sbjct: 428 QDVHECTIY 436


>gi|114509307|gb|ABI75190.1| ribsomal subunit S9 [Oncorhynchus tshawytscha]
          Length = 100

 Score = 35.3 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
           E   D+  ++     +I  AR  +  RH+ V  + VNI S+  +      +    + 
Sbjct: 24  EEAPDSRFFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRS 80


>gi|121534494|ref|ZP_01666317.1| hemolysin A [Thermosinus carboxydivorans Nor1]
 gi|121306987|gb|EAX47906.1| hemolysin A [Thermosinus carboxydivorans Nor1]
          Length = 268

 Score = 35.3 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 19/46 (41%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK 136
             + RLD ++ +     +   A+ ++    V V+G+ V+       
Sbjct: 1   MPKERLDVLLVKRGLASSRERAKAWIMAGLVRVDGQRVDKAGAMVP 46


>gi|297581575|ref|ZP_06943498.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534413|gb|EFH73251.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 127

 Score = 35.3 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 9   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 67

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 68  IIEKISDQRRGAPE 81


>gi|255744307|ref|ZP_05418259.1| ribosome-associated heat shock protein [Vibrio cholera CIRS 101]
 gi|262158583|ref|ZP_06029698.1| ribosome-associated heat shock protein [Vibrio cholerae INDRE 91/1]
 gi|255737832|gb|EET93225.1| ribosome-associated heat shock protein [Vibrio cholera CIRS 101]
 gi|262029744|gb|EEY48393.1| ribosome-associated heat shock protein [Vibrio cholerae INDRE 91/1]
          Length = 125

 Score = 35.3 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 7   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 65

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 66  IIEKISDQRRGAPE 79


>gi|118349794|ref|XP_001008178.1| hypothetical protein TTHERM_00010930 [Tetrahymena thermophila]
 gi|89289945|gb|EAR87933.1| hypothetical protein TTHERM_00010930 [Tetrahymena thermophila SB210]
          Length = 1698

 Score = 35.3 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 121  VLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS-VLEASQLAERDVPEYISVNHDNMVATF 179
            + +N   +N  S   ++   +  K     L     +      R +P +ISV+        
Sbjct: 1513 IHINSNKINQISAFKRKKTNVWQKYIFTLLNIEFTKYPMSKNRRLPSWISVDLKYGKIIL 1572

Query: 180  VRIPSSLKDVPYPVIM 195
               P         + +
Sbjct: 1573 TGEPQYFDSESIMIKI 1588


>gi|146319969|ref|YP_001199680.1| tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751034|ref|YP_003024175.1| putative tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253752935|ref|YP_003026075.1| tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253754759|ref|YP_003027899.1| tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|189029779|sp|A4VYU1|SYY_STRS2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145690775|gb|ABP91280.1| Tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815323|emb|CAZ50892.1| putative tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817223|emb|CAZ54947.1| putative tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819180|emb|CAR44342.1| putative tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557577|gb|ADE30578.1| Tyrosyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319757286|gb|ADV69228.1| tyrosyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 418

 Score = 35.3 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 64  DISEKKF----RSIFKEADRSRGDTSHNLISFLESRLDTI--VYRAKFVPTIFAARQFVN 117
           +I+E+ F    +++  +  +       N     E  L+ +  +  +  V +   AR+ V 
Sbjct: 316 NITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLVTSGIVNSKRQAREDVQ 375

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + VNG  V    Y   + D I+ 
Sbjct: 376 NGAIYVNGERVQDLDYTLSDSDKIDG 401


>gi|259501971|ref|ZP_05744873.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170030|gb|EEW54525.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 416

 Score = 35.3 bits (80), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 15/41 (36%)

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144
              P+   ARQ V++  + +NG  V             + K
Sbjct: 359 GMEPSRRQARQDVSNGAIRINGEKVTDVDAEVDPSTHFDGK 399


>gi|219847267|ref|YP_002461700.1| hemolysin A [Chloroflexus aggregans DSM 9485]
 gi|219541526|gb|ACL23264.1| hemolysin A [Chloroflexus aggregans DSM 9485]
          Length = 264

 Score = 35.3 bits (80), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145
               RLDT++       T   A+  +    VLVNG+       +      IEV+ 
Sbjct: 1   MTRQRLDTLLVERGLAETRAKAQALIMAGQVLVNGQVQTKAGTQVAADAQIEVRS 55


>gi|2896136|gb|AAC03115.1| ribosomal protein S4 [Pseudomonas aeruginosa]
          Length = 18

 Score = 35.3 bits (80), Expect = 5.6,   Method: Composition-based stats.
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 193 VIMQPNLVVEFYSR 206
           V +  NL+VE YS+
Sbjct: 5   VPINENLIVELYSK 18


>gi|239931905|ref|ZP_04688858.1| hypothetical protein SghaA1_27034 [Streptomyces ghanaensis ATCC
           14672]
 gi|291440275|ref|ZP_06579665.1| RNA-binding S4 domain-containing protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291343170|gb|EFE70126.1| RNA-binding S4 domain-containing protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 132

 Score = 35.3 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           R+D+ ++  + V T           HV VNG  V   ++  + GD + ++ + ++   V+
Sbjct: 55  RIDSWIWSVRLVKTRSLGATACRGGHVRVNGERV-KPAHSVRVGDEVRLRHEGRERVVVV 113

Query: 155 EASQLAERDVP 165
           +         P
Sbjct: 114 KRLIRKRVGAP 124


>gi|16801200|ref|NP_471468.1| hypothetical protein lin2134 [Listeria innocua Clip11262]
 gi|16414648|emb|CAC97364.1| lin2134 [Listeria innocua Clip11262]
          Length = 258

 Score = 35.3 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +                ++    RLD I+  A 
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNAH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|114679024|ref|XP_001174942.1| PREDICTED: similar to Ribosomal protein S9 isoform 3 [Pan
           troglodytes]
          Length = 203

 Score = 35.3 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 25/151 (16%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHV------ 121
                      +        +  FLE RL T V++     +I  AR  +  RH+      
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHISPLHLV 141

Query: 122 ---LVNGRSVNIGSYRCKEGDVIEVKQKSKQ 149
               V  + VNI S+  +      +    + 
Sbjct: 142 TSSRVRKQVVNIPSFIVRLDSQKHIDFSLRS 172


>gi|108562786|ref|YP_627102.1| hemolysin [Helicobacter pylori HPAG1]
 gi|107836559|gb|ABF84428.1| hemolysin [Helicobacter pylori HPAG1]
          Length = 235

 Score = 35.3 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 25/50 (50%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            RLD  ++    V +   A+  V    VLVN   V+  S+  KEGD IE+
Sbjct: 1   MRLDYALFNQHLVSSREKAKALVLKNQVLVNKMVVSKPSFIIKEGDQIEL 50


>gi|47097617|ref|ZP_00235141.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|254899274|ref|ZP_05259198.1| S4 domain protein [Listeria monocytogenes J0161]
 gi|254912587|ref|ZP_05262599.1| S4 domain-containing protein [Listeria monocytogenes J2818]
 gi|254936913|ref|ZP_05268610.1| S4 domain-containing protein [Listeria monocytogenes F6900]
 gi|47014004|gb|EAL05013.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|258609513|gb|EEW22121.1| S4 domain-containing protein [Listeria monocytogenes F6900]
 gi|293590578|gb|EFF98912.1| S4 domain-containing protein [Listeria monocytogenes J2818]
          Length = 258

 Score = 35.3 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +                ++    RLD I+  A 
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEIGLTVSSMRLDVIISNAH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|153212569|ref|ZP_01948316.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153825516|ref|ZP_01978183.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|229513663|ref|ZP_04403127.1| ribosome-associated heat shock protein [Vibrio cholerae TMA 21]
 gi|229524713|ref|ZP_04414118.1| ribosome-associated heat shock protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229527339|ref|ZP_04416731.1| ribosome-associated heat shock protein [Vibrio cholerae 12129(1)]
 gi|254225452|ref|ZP_04919063.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|124116440|gb|EAY35260.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|125622086|gb|EAZ50409.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|149740801|gb|EDM54892.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|229334971|gb|EEO00456.1| ribosome-associated heat shock protein [Vibrio cholerae 12129(1)]
 gi|229338294|gb|EEO03311.1| ribosome-associated heat shock protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229349540|gb|EEO14496.1| ribosome-associated heat shock protein [Vibrio cholerae TMA 21]
          Length = 127

 Score = 35.3 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 9   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 67

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 68  IIEKISDQRRGAPE 81


>gi|297243603|ref|ZP_06927534.1| rRNA methylase [Gardnerella vaginalis AMD]
 gi|296888354|gb|EFH27095.1| rRNA methylase [Gardnerella vaginalis AMD]
          Length = 267

 Score = 35.3 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 24/63 (38%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           +  RLD  + +     +   A++ +    V V+ R++   S+       I + +     +
Sbjct: 15  ISQRLDCALVKRGLAESRTTAQRLIRAGVVSVDNRNITKSSFLVNNSHAITINESKNTQS 74

Query: 152 SVL 154
            + 
Sbjct: 75  CIR 77


>gi|229545666|ref|ZP_04434391.1| pseudouridylate synthase [Enterococcus faecalis TX1322]
 gi|307275817|ref|ZP_07556956.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX2134]
 gi|307291840|ref|ZP_07571711.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX0411]
 gi|229309234|gb|EEN75221.1| pseudouridylate synthase [Enterococcus faecalis TX1322]
 gi|306497106|gb|EFM66652.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX0411]
 gi|306507509|gb|EFM76640.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX2134]
 gi|315029545|gb|EFT41477.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX4000]
 gi|315032018|gb|EFT43950.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX0017]
 gi|315144961|gb|EFT88977.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX2141]
 gi|315168880|gb|EFU12897.1| pseudouridine synthase, RluA family [Enterococcus faecalis TX1341]
          Length = 310

 Score = 35.3 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 75  KEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYR 134
           K+  +++ +  +  I   + R+D ++       +    +Q++  +HV VNG +V   +Y+
Sbjct: 3   KQQRKAKMEQINVTIQTEKGRIDKVLSEHLPNHSRSQIQQWLKEKHVTVNGETV-RANYK 61

Query: 135 CKEGDVIEVKQKSKQLASVLEASQLAERDVPEYISVNHDNMVATFVRIPS 184
              GD I V           EA  +   D+P  +++ +++     V  P 
Sbjct: 62  VTAGDEIVVTIPEP------EALDMVAEDIP--LTIVYEDNDVIVVNKPQ 103


>gi|229541185|ref|ZP_04430245.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1]
 gi|229325605|gb|EEN91280.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1]
          Length = 258

 Score = 35.3 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%)

Query: 108 TIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           +    R  + H  V VN ++V   +++C+EGD    +   +     +E     E+
Sbjct: 195 SRQKTRALIEHGLVKVNWKTVEDPAFQCEEGDTFSARGYGRSRLIRVEGKTKKEK 249


>gi|29565624|ref|NP_817203.1| ribosomal protein S4 [Pinus koraiensis]
 gi|29469723|gb|AAO74051.1| ORF76a [Pinus koraiensis]
          Length = 76

 Score = 35.3 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
            RL+ I++R    PTI  ARQ      + +N  ++
Sbjct: 1   MRLNNILFRLGMAPTIPGARQLTRLFFIQLNNCNI 35


>gi|147675399|ref|YP_001218223.1| hypothetical protein VC0395_A2308 [Vibrio cholerae O395]
 gi|146317282|gb|ABQ21821.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227014621|gb|ACP10831.1| Heat shock protein 15 [Vibrio cholerae O395]
          Length = 127

 Score = 35.3 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 9   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 67

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 68  IIEKISDQRRGAPE 81


>gi|192288921|ref|YP_001989526.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192282670|gb|ACE99050.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 89

 Score = 35.3 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
             RLD  ++ A+ V    +A   V   HV +NG       +  K GDV+ +
Sbjct: 3   RQRLDKWLWHARVVRARTSAAALVERGHVRINGVRETSPGHGIKVGDVLTI 53


>gi|241895685|ref|ZP_04782981.1| ribosomal protein S4e [Weissella paramesenteroides ATCC 33313]
 gi|241871052|gb|EER74803.1| ribosomal protein S4e [Weissella paramesenteroides ATCC 33313]
          Length = 261

 Score = 34.9 bits (79), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
           RLD+IV    +  +   A+Q + H  V VN   +N   Y     D++ V++  +
Sbjct: 185 RLDSIV-ANGYNISRNHAKQMIEHDLVRVNWTDINKPDYVLAVNDLVSVRKYGR 237


>gi|325278866|ref|YP_004251408.1| Sporulation domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324310675|gb|ADY31228.1| Sporulation domain-containing protein [Odoribacter splanchnicus DSM
           20712]
          Length = 173

 Score = 34.9 bits (79), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERDVPEYIS-VNHDNMVAT 178
           H+ +N +      YR +   V       + L  +    +   +D+P Y+   + D     
Sbjct: 63  HIHLNEKKKTFTGYRIQIYSVSSFGCNIENLKEMRNKFEETFQDIPAYLKYFDPD-FKIR 121

Query: 179 FVRIPSSLKDVP 190
                + L+ +P
Sbjct: 122 VGNYRNRLECIP 133


>gi|302389863|ref|YP_003825684.1| hemolysin A [Thermosediminibacter oceani DSM 16646]
 gi|302200491|gb|ADL08061.1| hemolysin A [Thermosediminibacter oceani DSM 16646]
          Length = 264

 Score = 34.9 bits (79), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147
             + RLD ++ +     +   A+  +   +V VN + ++           I VK++S
Sbjct: 1   MQKERLDVLLVQRGLFSSRERAKSEIMMGNVFVNNKKIDKPGTMVDINSDIIVKERS 57


>gi|290892174|ref|ZP_06555170.1| S4 domain-containing protein [Listeria monocytogenes FSL J2-071]
 gi|290558297|gb|EFD91815.1| S4 domain-containing protein [Listeria monocytogenes FSL J2-071]
          Length = 258

 Score = 34.9 bits (79), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +    A  +        ++    RLD I+  A 
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLAN----AIYAPVVWEEIGLTVSSMRLDVIISNAH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|241206829|ref|YP_002977925.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860719|gb|ACS58386.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 134

 Score = 34.9 bits (79), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             R+D  ++ A+   +   A+  +   HV +NG   +  S   K GD IE+  + + +  
Sbjct: 12  RQRIDKWLFFARMAKSRSVAQSHIQSGHVRINGERCSQPSQMVKPGDRIELTLERRDVVL 71

Query: 153 VL 154
           V+
Sbjct: 72  VV 73


>gi|224540975|ref|ZP_03681514.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526126|gb|EEF95231.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
          Length = 408

 Score = 34.9 bits (79), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKE-----GDVIEVKQKS 147
           E  L+ +V +A    +   ARQFV    VLVNG  V    +   +     G V  +++  
Sbjct: 341 EQILNVLV-KAGAASSNREARQFVKGGSVLVNGEKVTDEKFVVSKDNAFGGKVTVIRRGK 399

Query: 148 KQLASVL 154
           K+   + 
Sbjct: 400 KKYFVIN 406


>gi|116873458|ref|YP_850239.1| S4 domain-containing protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742336|emb|CAK21460.1| S4 domain protein [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 258

 Score = 34.9 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +                ++    RLD I+  A 
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLTNAVYAP----VVWEEVGLTVSSMRLDVIISNAH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|262170024|ref|ZP_06037713.1| ribosome-associated heat shock protein [Vibrio cholerae RC27]
 gi|262021432|gb|EEY40144.1| ribosome-associated heat shock protein [Vibrio cholerae RC27]
          Length = 125

 Score = 34.9 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 7   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTI 65

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 66  IIEKISDQRRGAPE 79


>gi|262190139|ref|ZP_06048424.1| ribosome-associated heat shock protein [Vibrio cholerae CT 5369-93]
 gi|262033980|gb|EEY52435.1| ribosome-associated heat shock protein [Vibrio cholerae CT 5369-93]
          Length = 125

 Score = 34.9 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 7   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVEIGAQITLRQGHDEKTV 65

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 66  IIEKISDQRRGAPE 79


>gi|297538421|ref|YP_003674190.1| RNA-binding S4 domain-containing protein [Methylotenera sp. 301]
 gi|297257768|gb|ADI29613.1| RNA-binding S4 domain protein [Methylotenera sp. 301]
          Length = 138

 Score = 34.9 bits (79), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + RLD  ++ A+F  T   A   +    V V+G  V   +     G VI ++ +  ++  
Sbjct: 11  KCRLDKWLWSARFFKTRSLATAAIETGKVHVDGDRV-KPAKEVHIGQVIHIRNRDFEIEV 69

Query: 153 VLEASQLAERDVPE 166
            + A     R  PE
Sbjct: 70  NVLALSNIRRGSPE 83


>gi|124810096|ref|XP_001348758.1| mitochondrial ribosomal protein S4/S9 precursor, putative
           [Plasmodium falciparum 3D7]
 gi|23497657|gb|AAN37197.1| mitochondrial ribosomal protein S4/S9 precursor, putative
           [Plasmodium falciparum 3D7]
          Length = 159

 Score = 34.9 bits (79), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV--IEVKQKSKQ 149
              RL  +++R KFV TI  A  ++ H ++ +    +N  S+         I+    SK 
Sbjct: 81  CRRRLAVLLFRLKFVQTIKLAITYIQHGNIRIGNNVINNPSFHINRNMEDHIKWADGSKI 140

Query: 150 LASVLEASQLAE 161
           L  + +  +  +
Sbjct: 141 LKHIQKHRESKD 152


>gi|253996393|ref|YP_003048457.1| RNA-binding S4 domain-containing protein [Methylotenera mobilis
           JLW8]
 gi|253983072|gb|ACT47930.1| RNA-binding S4 domain protein [Methylotenera mobilis JLW8]
          Length = 132

 Score = 34.9 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + RLD  ++ A+F  T   A   ++   V V+G  V   +     G  I ++ +  ++  
Sbjct: 8   KCRLDKWLWAARFFKTRSLATTAIDTGKVHVDGDRV-KPAKEVHIGQTIHIRNRDFEIEV 66

Query: 153 VLEASQLAERDVPE 166
            ++A     +  PE
Sbjct: 67  TVQALSNVRKGAPE 80


>gi|15645700|ref|NP_207877.1| hemolysin (tly) [Helicobacter pylori 26695]
 gi|2314234|gb|AAD08129.1| hemolysin (tly) [Helicobacter pylori 26695]
          Length = 235

 Score = 34.9 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++    V +   A+  V    VLVN   V+  S+  KE D IE+  +       
Sbjct: 1   MRLDYALFSQHLVNSREKAKALVLKNQVLVNKMVVSKPSFIVKENDKIELIAE------- 53

Query: 154 LEASQLAERDVPEYISVNHDNMVATFV 180
                 A   +  ++  +  +     V
Sbjct: 54  KLFVSRAGEKLGAFLETHFVDFKGKVV 80


>gi|89093788|ref|ZP_01166734.1| heat shock protein 15-like [Oceanospirillum sp. MED92]
 gi|89081918|gb|EAR61144.1| heat shock protein 15-like [Oceanospirillum sp. MED92]
          Length = 139

 Score = 34.9 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           + RLD  ++ A+F  T   A+Q +    V  NG+     S   + G V+E++Q   +   
Sbjct: 7   KVRLDKWLWAARFYKTRAIAKQMIEGGKVHYNGQR-TKCSRHVEVGAVLEIRQGFDEKEI 65

Query: 153 VLEASQLAERDVPE 166
           V+       R  PE
Sbjct: 66  VVVMLSDQRRGAPE 79


>gi|315283065|ref|ZP_07871338.1| S4 domain-containing protein [Listeria marthii FSL S4-120]
 gi|313613292|gb|EFR87163.1| S4 domain-containing protein [Listeria marthii FSL S4-120]
          Length = 163

 Score = 34.9 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E +  +                ++    RLD I+  A 
Sbjct: 45  KDYLTLQLEKVGKVNVM---LEETELANAVYAP----VIWEEMGLTVSSMRLDVIISNAH 97

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 98  HIS-RQKAKQLVVAGLVKVNWKTVENPDFECEEEDVLSARGYGR 140


>gi|298492287|ref|YP_003722464.1| beta-lactamase domain-containing protein ['Nostoc azollae' 0708]
 gi|298234205|gb|ADI65341.1| beta-lactamase domain protein ['Nostoc azollae' 0708]
          Length = 571

 Score = 34.9 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 156 ASQLAERDVP-EYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEF 203
           AS++  + +P  +   + +++ A    +P        PV +Q NL+VE 
Sbjct: 104 ASEVTSKLLPLNWPEQDPEDIPAFCHALPLRS-----PVEIQENLIVEL 147


>gi|315633375|ref|ZP_07888666.1| Hsp15 family heat shock protein [Aggregatibacter segnis ATCC 33393]
 gi|315477875|gb|EFU68616.1| Hsp15 family heat shock protein [Aggregatibacter segnis ATCC 33393]
          Length = 138

 Score = 34.9 bits (79), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD  ++ A+F  T   A++ ++   V  NG+  +  +   + G  ++++Q S +   V+
Sbjct: 15  RLDKWLWAARFYKTRTLAKEMIDGGKVHYNGQR-SKPNKIVEVGATLKIRQGSDEKEIVV 73

Query: 155 EASQLAERDVPE 166
            A     R  PE
Sbjct: 74  LALSTQRRGAPE 85


>gi|147921289|ref|YP_684897.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
 gi|110620293|emb|CAJ35571.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
          Length = 216

 Score = 34.9 bits (79), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  +     + +   A+++++   V +NG  V   S + K G +IE+ ++ +     
Sbjct: 1   MRLDEYLVSEGLIASRSRAKRYIHRGLVKLNGEVVTKPSKQVKPGAIIEIAEEDRPEGYF 60

Query: 154 L 154
            
Sbjct: 61  K 61


>gi|223933066|ref|ZP_03625059.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330831970|ref|YP_004400795.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223898253|gb|EEF64621.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329306193|gb|AEB80609.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 418

 Score = 34.9 bits (79), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 64  DISEKKF----RSIFKEADRSRGDTSHNLISFLESRLDTI--VYRAKFVPTIFAARQFVN 117
           +I+E+ F    +++  +  +       N     E  L+ +  +  +  V +   AR+ V 
Sbjct: 316 NITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLVTSGIVTSKRQAREDVQ 375

Query: 118 HRHVLVNGRSVNIGSYRCKEGDVIEV 143
           +  + VNG  V    Y   + D I+ 
Sbjct: 376 NGAIYVNGERVQDLDYTLSDSDKIDG 401


>gi|115522156|ref|YP_779067.1| RNA-binding S4 domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115516103|gb|ABJ04087.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris BisA53]
          Length = 89

 Score = 34.9 bits (79), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             RLD  ++ A+ V    +A   V   HV VNG       +  K GDV+ +     +   
Sbjct: 3   RQRLDKWLWHARVVKARNSAVALVESGHVRVNGGRQTSPGHALKAGDVVTIALD--RSVR 60

Query: 153 VLEASQLAER 162
           VL+    +ER
Sbjct: 61  VLKVIGFSER 70


>gi|46198486|ref|YP_004153.1| hemolysin [Thermus thermophilus HB27]
 gi|46196108|gb|AAS80526.1| hemolysin [Thermus thermophilus HB27]
          Length = 235

 Score = 34.5 bits (78), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            RLD  +     V +   A++ +    V V G+ V   ++   EG  +E+  + +
Sbjct: 1   MRLDRYLVERGLVESREKAKRLIQEGKVRVGGKVVQKPAHPVPEGAAVELLAEER 55


>gi|217076810|ref|YP_002334526.1| ribosomal large subunit pseudouridine synthase B [Thermosipho
           africanus TCF52B]
 gi|217036663|gb|ACJ75185.1| ribosomal large subunit pseudouridine synthase B [Thermosipho
           africanus TCF52B]
          Length = 247

 Score = 34.5 bits (78), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            +L   +    F      A Q++    V VNG+ V+   +  K+ D++ +  K  ++   
Sbjct: 8   IKLQKYLQMCGFA--RRKADQYIIAGRVTVNGKVVDKPWFDVKDDDIVMLDNKKLKINQK 65

Query: 154 LE 155
            E
Sbjct: 66  FE 67


>gi|178925007|gb|ACB77911.1| ribosomal protein S9 [Dreissena polymorpha]
          Length = 51

 Score = 34.5 bits (78), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 79  RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
           +        +  FLE RL T V++     +I  AR  +  RH+ V  + V
Sbjct: 2   KLDFVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVV 51


>gi|255935707|ref|XP_002558880.1| Pc13g04450 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583500|emb|CAP91514.1| Pc13g04450 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 188

 Score = 34.5 bits (78), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 91  FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDV--IEVKQKSK 148
               RL   + R+  V TI AA  F+   HV V    VN  ++         +     SK
Sbjct: 111 LCRRRLAVFMVRSGMVETIKAATTFIEQGHVRVGTEVVNDPAFLVTRNMEDFVTWVDSSK 170

Query: 149 QLASVLEASQ 158
              ++L   +
Sbjct: 171 IKRNILRYRE 180


>gi|327191765|gb|EGE58767.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           CNPAF512]
          Length = 134

 Score = 34.5 bits (78), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             R+D  ++  + V +   A+  V   HV +NG   +  S   K GD IE+  + + +  
Sbjct: 12  RQRIDKWLFFTRMVKSRSLAQSHVQSGHVRINGERCSQPSQMVKPGDRIELTLERRDIVL 71

Query: 153 VL 154
           ++
Sbjct: 72  IV 73


>gi|190893875|ref|YP_001980417.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           CIAT 652]
 gi|218507914|ref|ZP_03505792.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           Brasil 5]
 gi|190699154|gb|ACE93239.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           CIAT 652]
          Length = 134

 Score = 34.5 bits (78), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
             R+D  ++  + V +   A+  V   HV +NG   +  S   K GD IE+  + + +  
Sbjct: 12  RQRIDKWLFFTRMVKSRSLAQSHVQSGHVRINGERCSQPSQMVKPGDRIELTLERRDIVL 71

Query: 153 VL 154
           ++
Sbjct: 72  IV 73


>gi|251793752|ref|YP_003008482.1| heat shock protein 15 [Aggregatibacter aphrophilus NJ8700]
 gi|247535149|gb|ACS98395.1| heat shock protein 15 (HSP15) [Aggregatibacter aphrophilus NJ8700]
          Length = 137

 Score = 34.5 bits (78), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD  ++ A+F  T   A++ ++   V  NG+     +   + G  ++++Q +++   V+
Sbjct: 14  RLDKWLWAARFYKTRTLAKEMIDGGKVHYNGQR-TKPNKIVEVGATLKLRQGNEEKEVVI 72

Query: 155 EASQLAERDVPE 166
            A     R  PE
Sbjct: 73  LALSAQRRGAPE 84


>gi|229521809|ref|ZP_04411227.1| ribosome-associated heat shock protein [Vibrio cholerae TM
           11079-80]
 gi|229341403|gb|EEO06407.1| ribosome-associated heat shock protein [Vibrio cholerae TM
           11079-80]
          Length = 127

 Score = 34.5 bits (78), Expect = 8.4,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 93  ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLAS 152
           E RLD  ++ A+F  T   AR  V    V  NG+     S   + G  I ++Q   +   
Sbjct: 9   EVRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRA-KPSKSVELGAQITLRQGHDEKTV 67

Query: 153 VLEASQLAERDVPE 166
           ++E      R  PE
Sbjct: 68  IIEKISDQRRGAPE 81


>gi|226224634|ref|YP_002758741.1| hypothetical protein Lm4b_02049 [Listeria monocytogenes Clip81459]
 gi|225877096|emb|CAS05808.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 258

 Score = 34.5 bits (78), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 8/104 (7%)

Query: 45  PSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAK 104
             Y  LQL    K+      + E    +                ++    RLD I+    
Sbjct: 140 KDYLTLQLEKIGKVNVM---LEETDLANAVYAP----VVWEEMGLTVSSMRLDVIISNVH 192

Query: 105 FVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148
            +     A+Q V    V VN ++V    + C+E DV+  +   +
Sbjct: 193 HIS-RQKAKQLVTAGLVKVNWKTVENPDFECEEEDVLSARGYGR 235


>gi|227529017|ref|ZP_03959066.1| ribosomal protein S4e [Lactobacillus vaginalis ATCC 49540]
 gi|227351029|gb|EEJ41320.1| ribosomal protein S4e [Lactobacillus vaginalis ATCC 49540]
          Length = 261

 Score = 34.5 bits (78), Expect = 8.8,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%)

Query: 103 AKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAER 162
           A F  +   A+Q + H  V +N   +    Y  +E D++ V+   +     + +     +
Sbjct: 192 AGFNYSRNRAKQLLEHGLVQINWEEMQRPDYSVREHDMLSVRHAGRLRMDQVGSITRKNK 251


>gi|37678393|ref|NP_933002.1| ribosome-associated heat shock protein [Vibrio vulnificus YJ016]
 gi|320157719|ref|YP_004190098.1| ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit (S4-like protein) [Vibrio vulnificus
           MO6-24/O]
 gi|37197132|dbj|BAC92973.1| ribosome-associated heat shock protein [Vibrio vulnificus YJ016]
 gi|319933031|gb|ADV87895.1| ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit (S4 paralog) [Vibrio vulnificus
           MO6-24/O]
          Length = 130

 Score = 34.5 bits (78), Expect = 8.8,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD  ++ A+F  T   AR  V+   V  NG+     S   + G V++++Q +++   V+
Sbjct: 11  RLDKWLWAARFYKTRSIARDMVDGGKVHYNGQRA-KPSKIVEVGAVLKLRQGNEEKTVVI 69

Query: 155 EASQLAERDVPE 166
           E      R  PE
Sbjct: 70  EKLSTQRRGAPE 81


>gi|119592620|gb|EAW72214.1| ribosomal protein S9, isoform CRA_e [Homo sapiens]
          Length = 156

 Score = 34.5 bits (78), Expect = 9.2,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 16/115 (13%)

Query: 24  KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEAD----- 78
           KS ++      G +G R K +       L   +K  +    + EK  R +F+        
Sbjct: 22  KSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRL 81

Query: 79  -----------RSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVL 122
                      +        +  FLE RL T V++     +I  AR  +  RH+ 
Sbjct: 82  VRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136


>gi|27364327|ref|NP_759855.1| ribosome-associated heat shock protein [Vibrio vulnificus CMCP6]
 gi|27360445|gb|AAO09382.1| Ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit (S4 paralog) [Vibrio vulnificus
           CMCP6]
          Length = 128

 Score = 34.5 bits (78), Expect = 9.3,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVL 154
           RLD  ++ A+F  T   AR  V+   V  NG+     S   + G V++++Q +++   V+
Sbjct: 9   RLDKWLWAARFYKTRSIARDMVDGGKVHYNGQRA-KPSKIVEVGAVLKLRQGNEEKTVVI 67

Query: 155 EASQLAERDVPE 166
           E      R  PE
Sbjct: 68  EKLSTQRRGAPE 79


>gi|157151563|ref|YP_001449982.1| S4 domain-containing protein [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076357|gb|ABV11040.1| S4 domain [Streptococcus gordonii str. Challis substr. CH1]
          Length = 275

 Score = 34.5 bits (78), Expect = 9.3,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 74  FKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSY 133
           F+   R +       I     RLD ++  + F  +   A Q +  +HV VN   ++  SY
Sbjct: 177 FERLLRVQEAQVSKEILASSMRLDKLI-ASSFKLSRNDASQLIFGKHVKVNYSIIDNPSY 235

Query: 134 RCKEGDVIEVKQKSKQLASVLEA 156
             +  D+I V++  +    V E 
Sbjct: 236 LVELNDLISVRRFGR-FKIVKEN 257


>gi|188527169|ref|YP_001909856.1| hemolysin [Helicobacter pylori Shi470]
 gi|188143409|gb|ACD47826.1| hemolysin [Helicobacter pylori Shi470]
          Length = 235

 Score = 34.5 bits (78), Expect = 9.6,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 25/50 (50%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEV 143
            RLD  ++    V +   A+  V    VLVN   V+  S+  KEGD IE+
Sbjct: 1   MRLDYALFNQHLVNSREKAKALVLKNQVLVNKMVVSKPSFIVKEGDKIEL 50


>gi|125631518|gb|ABN47222.1| ribosomal protein S9 [Oxydesmus granulosus]
          Length = 103

 Score = 34.5 bits (78), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 77  ADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSV 128
             +        +  FLE RL T V++     +I  AR  +  +H+ V  + V
Sbjct: 52  RMKLDYVLGLRVEVFLERRLQTQVFKLGLAKSIHHARVLIRQKHISVRKQVV 103


>gi|312882860|ref|ZP_07742592.1| hypothetical protein VIBC2010_19815 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369379|gb|EFP96899.1| hypothetical protein VIBC2010_19815 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 128

 Score = 34.5 bits (78), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 94  SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASV 153
            RLD  ++ A+F  T   AR  ++   V  NG+     S   + G  I ++Q  ++   +
Sbjct: 8   IRLDKWLWAARFYKTRSIARNMIDGGKVHYNGQR-TKPSKTVETGATITLRQGHEEKTII 66

Query: 154 LEASQLAERDVPE 166
           +E      R  PE
Sbjct: 67  IERISGQRRGAPE 79


>gi|15967012|ref|NP_387365.1| HEAT shock-like protein [Sinorhizobium meliloti 1021]
 gi|307302480|ref|ZP_07582237.1| RNA-binding S4 domain protein [Sinorhizobium meliloti BL225C]
 gi|307316190|ref|ZP_07595634.1| RNA-binding S4 domain protein [Sinorhizobium meliloti AK83]
 gi|15076285|emb|CAC47838.1| Heat shock protein 15 (HSP15) [Sinorhizobium meliloti 1021]
 gi|306898030|gb|EFN28772.1| RNA-binding S4 domain protein [Sinorhizobium meliloti AK83]
 gi|306903150|gb|EFN33740.1| RNA-binding S4 domain protein [Sinorhizobium meliloti BL225C]
          Length = 143

 Score = 34.5 bits (78), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 32/61 (52%)

Query: 92  LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLA 151
           +  RLD  ++ A+ + +   A++ +   HV VNG+     S + K GD++EV  + + L 
Sbjct: 11  MRQRLDKWLFFARLIKSRSLAQKAIEAGHVAVNGKRETQSSAQIKAGDMLEVSLERRDLV 70

Query: 152 S 152
            
Sbjct: 71  V 71


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.316    0.147    0.477 

Lambda     K      H
   0.267   0.0451    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,983,887,153
Number of Sequences: 13984884
Number of extensions: 72525123
Number of successful extensions: 246267
Number of sequences better than 10.0: 7615
Number of HSP's better than 10.0 without gapping: 7392
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 215803
Number of HSP's gapped (non-prelim): 7758
length of query: 206
length of database: 4,792,584,752
effective HSP length: 132
effective length of query: 74
effective length of database: 2,946,580,064
effective search space: 218046924736
effective search space used: 218046924736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 78 (34.5 bits)